BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 014624
         (421 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225438416|ref|XP_002276062.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Vitis vinifera]
 gi|296082577|emb|CBI21582.3| unnamed protein product [Vitis vinifera]
          Length = 557

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 297/353 (84%), Positives = 329/353 (93%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           GQD EKLSLIKLASLIEVSSKKGTRDLNLQNKLMD IEWLPDSIGKLSSL++LDLSENRI
Sbjct: 205 GQDSEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDQIEWLPDSIGKLSSLMTLDLSENRI 264

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           VA+PATIGGLSSL KLDLH+NRI ELPD IG+LLS+V LDLRGNQ+++LP    RLVRLE
Sbjct: 265 VALPATIGGLSSLTKLDLHSNRIAELPDCIGNLLSVVVLDLRGNQLTSLPATFCRLVRLE 324

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELDL SN LSSLP+SIGSL+ LKKL VETND+EE+PHTIGQCSSL+ELR DYNRLKALPE
Sbjct: 325 ELDLSSNRLSSLPESIGSLVKLKKLSVETNDIEEIPHTIGQCSSLKELRADYNRLKALPE 384

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVG+I +LE+LSVRYNNIKQLPTTMSSLS+LRELDVSFNELES+PESLCFATTLVKMNIG
Sbjct: 385 AVGRIQSLEILSVRYNNIKQLPTTMSSLSNLRELDVSFNELESIPESLCFATTLVKMNIG 444

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +NFADL+ LPRSIGNLEMLEELDISNNQIRVLPDSF+ML+RLRVLR+ +NPLEVPPR++ 
Sbjct: 445 SNFADLQYLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTRLRVLRLDQNPLEVPPRHVA 504

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDYVKA 421
           EMGAQAVVQYMA+LV KR+ K+ PVKQKK+W + CFFSRSNKRKRNGMDYVKA
Sbjct: 505 EMGAQAVVQYMAELVAKREVKSLPVKQKKTWAQRCFFSRSNKRKRNGMDYVKA 557


>gi|224081457|ref|XP_002306417.1| predicted protein [Populus trichocarpa]
 gi|222855866|gb|EEE93413.1| predicted protein [Populus trichocarpa]
          Length = 531

 Score =  599 bits (1545), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 292/362 (80%), Positives = 325/362 (89%)

Query: 58  VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSS 117
            P ++       QDGEKLSLIKLASLIEVSSKKGT++LNLQNKLMD ++WLPDSIGKLSS
Sbjct: 170 TPQIVDSTLKASQDGEKLSLIKLASLIEVSSKKGTQELNLQNKLMDQVDWLPDSIGKLSS 229

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           LV+LDLSENRIVA+P TIGGLSSL KLDLH+NRI ELP SIGDLLSLV LD+RGNQ+S L
Sbjct: 230 LVTLDLSENRIVALPETIGGLSSLTKLDLHSNRIGELPGSIGDLLSLVALDVRGNQLSFL 289

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P    RLVRL++LDL SN LSSLPD+IGSL+SLKKL VETND+EE+PHTIG+CSSL+ELR
Sbjct: 290 PATFGRLVRLQDLDLSSNRLSSLPDTIGSLVSLKKLNVETNDIEEIPHTIGKCSSLKELR 349

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
            DYNRLKALPEAVGKI TLEVLSVRYNNIKQLPTTMSSL SL+ELDVSFNELESVPESLC
Sbjct: 350 ADYNRLKALPEAVGKIETLEVLSVRYNNIKQLPTTMSSLLSLKELDVSFNELESVPESLC 409

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
           FAT+LVKMNIGNNFAD+++LPRSIGNLE LEELDISNNQI  LPDSFRML+RLR+LR +E
Sbjct: 410 FATSLVKMNIGNNFADMQSLPRSIGNLENLEELDISNNQIHALPDSFRMLTRLRILRAEE 469

Query: 358 NPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
           NPLEVPPR+I E GAQA VQYM +LVEKRD K QPVKQKKSW ++CFFS+SNKRKRNG+D
Sbjct: 470 NPLEVPPRHIAEKGAQAAVQYMVELVEKRDVKVQPVKQKKSWAQICFFSKSNKRKRNGLD 529

Query: 418 YV 419
           YV
Sbjct: 530 YV 531


>gi|356538413|ref|XP_003537698.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 567

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 288/359 (80%), Positives = 331/359 (92%), Gaps = 3/359 (0%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
              GQDG+KLSLIKLASLIEVS+KKGTRDL LQNKLMD ++WLPDSIGKLSSLV+LDLSE
Sbjct: 209 TTAGQDGDKLSLIKLASLIEVSAKKGTRDLKLQNKLMDQVDWLPDSIGKLSSLVTLDLSE 268

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRIVA+PATIGGLSSL +LDLH+NRI ELPDS+G+LLSLVYLDLRGNQ++ LP + SRLV
Sbjct: 269 NRIVALPATIGGLSSLTRLDLHSNRITELPDSVGNLLSLVYLDLRGNQLTLLPASFSRLV 328

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           RLEELDL SN LS+LPD+IGSL+ LK L VETND+EELPH++G CSSLRELR+DYNRLKA
Sbjct: 329 RLEELDLSSNQLSALPDTIGSLVRLKILNVETNDIEELPHSVGSCSSLRELRIDYNRLKA 388

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEAVGKI +LE+LSVRYNNIKQLPTTMSSL++L+EL+VSFNELESVPESLCFAT+LVKM
Sbjct: 389 LPEAVGKIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVSFNELESVPESLCFATSLVKM 448

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           NIGNNFAD+R+LPRSIGNLE+LEELDISNNQIRVLP+SFRML++LR+LR +ENPLEVPPR
Sbjct: 449 NIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFRMLTQLRILRAEENPLEVPPR 508

Query: 366 NIVEMGAQAVVQYMADLVEKR---DAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDYVKA 421
            I + GAQAVVQYMA+LVEKR   D K QP+KQKKSW ++CFFS+SNKRKR+G+DYVK 
Sbjct: 509 EIADKGAQAVVQYMAELVEKREKKDVKAQPLKQKKSWAQICFFSKSNKRKRDGVDYVKT 567


>gi|255583434|ref|XP_002532476.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223527801|gb|EEF29900.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 581

 Score =  596 bits (1536), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 293/358 (81%), Positives = 328/358 (91%), Gaps = 1/358 (0%)

Query: 64  CMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDL 123
                GQDG+KLSLIKLASLIEVS KKGT+DLNLQNKLMD IEWLPDSIGKLS+LVSLDL
Sbjct: 225 ATTTSGQDGDKLSLIKLASLIEVSKKKGTKDLNLQNKLMDQIEWLPDSIGKLSNLVSLDL 284

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           SENRIVA+PATIGGLSSL KLDLH+N+I ELP+SIGDLLSLV+LDLR N IS+LP   SR
Sbjct: 285 SENRIVALPATIGGLSSLTKLDLHSNKIAELPESIGDLLSLVFLDLRANHISSLPATFSR 344

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           LVRL+ELDL SN+LSSLP+SIGSLISLK L VETND+EE+PH+IG+CSSL+EL  DYNRL
Sbjct: 345 LVRLQELDLSSNHLSSLPESIGSLISLKILNVETNDIEEIPHSIGRCSSLKELHADYNRL 404

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           KALPEAVGKI TLEVLSVRYNNIKQLPTTMSSL +L+EL+VSFNELESVPESLCFAT+LV
Sbjct: 405 KALPEAVGKIETLEVLSVRYNNIKQLPTTMSSLLNLKELNVSFNELESVPESLCFATSLV 464

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           K+NIGNNFADL+ LPRSIGNLE LEELDISNNQIR LPDSFRML++LRVLRV++NPLEVP
Sbjct: 465 KINIGNNFADLQYLPRSIGNLENLEELDISNNQIRALPDSFRMLTKLRVLRVEQNPLEVP 524

Query: 364 PRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDYVKA 421
           PR+I E GAQAVVQYMA+L EK+D KT P+KQKKSW ++CFFS+SNKRKR+GMDYVKA
Sbjct: 525 PRHIAEKGAQAVVQYMAELFEKKDVKT-PIKQKKSWAQICFFSKSNKRKRSGMDYVKA 581


>gi|224094248|ref|XP_002310108.1| predicted protein [Populus trichocarpa]
 gi|222853011|gb|EEE90558.1| predicted protein [Populus trichocarpa]
          Length = 537

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 291/362 (80%), Positives = 325/362 (89%)

Query: 58  VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSS 117
            P +        QDGEKLSLIKLASLIEVS+KKGTR+LNLQNKLMD ++WLPDSIGKLSS
Sbjct: 176 TPHIADSTLKASQDGEKLSLIKLASLIEVSAKKGTRELNLQNKLMDQVDWLPDSIGKLSS 235

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           LV+LDLS+NRIVA+P TIGGLSSL KLDLHANRI ELP SIGDLLSLV LD+RGNQ+S+L
Sbjct: 236 LVTLDLSDNRIVALPDTIGGLSSLTKLDLHANRIGELPGSIGDLLSLVVLDVRGNQLSSL 295

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P    RLVRL+ELDL SN LSSLPD+IGSL+SLK L VETND+EE+P+TIG+C SL+ELR
Sbjct: 296 PATFGRLVRLQELDLSSNRLSSLPDTIGSLVSLKNLNVETNDIEEIPYTIGKCLSLKELR 355

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
            DYNRLKALPEAVGKI TLEVLSVRYNNIKQLPTTMSSL SL+ELDVSFNELESVPESLC
Sbjct: 356 ADYNRLKALPEAVGKIETLEVLSVRYNNIKQLPTTMSSLLSLKELDVSFNELESVPESLC 415

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
           FA +L+KMNIGNNFAD+++LPRSIGNLE LEELDISNNQIRVLP SFRML+RLR+LRV+E
Sbjct: 416 FAISLIKMNIGNNFADMQSLPRSIGNLENLEELDISNNQIRVLPGSFRMLTRLRILRVEE 475

Query: 358 NPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
            PLEVPPR++ E GAQAVVQYMA+LVEKRD K QPVKQKKSW ++CFFS+SNKRKRNGMD
Sbjct: 476 TPLEVPPRHVAEKGAQAVVQYMAELVEKRDIKAQPVKQKKSWAQICFFSKSNKRKRNGMD 535

Query: 418 YV 419
           YV
Sbjct: 536 YV 537


>gi|356496527|ref|XP_003517118.1| PREDICTED: uncharacterized protein LOC100787496 [Glycine max]
          Length = 574

 Score =  578 bits (1490), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 290/359 (80%), Positives = 330/359 (91%), Gaps = 3/359 (0%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
              GQDG+KLSLIKLASLIEVS+KKGTRDL LQNKLMD ++WLPDSIGKLSSLV+LDLSE
Sbjct: 216 STAGQDGDKLSLIKLASLIEVSAKKGTRDLKLQNKLMDQVDWLPDSIGKLSSLVTLDLSE 275

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRI+A+PATIGGLSSL +LDLH+NRI ELPDS+G+LLSL+YLDLRGNQ++ LP + SRLV
Sbjct: 276 NRIMALPATIGGLSSLTRLDLHSNRITELPDSVGNLLSLLYLDLRGNQLTLLPASFSRLV 335

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           RLEELDL SN LS+LPDSIGSL+ LK L VETND+EELPH++G CSSLRELRVDYNRLKA
Sbjct: 336 RLEELDLSSNQLSALPDSIGSLVRLKILNVETNDIEELPHSVGSCSSLRELRVDYNRLKA 395

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEAVGKI +LE+LSVRYNNIKQLPTTMSSL++L+EL+VSFNELESVPESLCFAT+LVKM
Sbjct: 396 LPEAVGKIQSLEILSVRYNNIKQLPTTMSSLTNLKELNVSFNELESVPESLCFATSLVKM 455

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           NIGNNFAD+R+LPRSIGNLE+LEELDISNNQIRVLP+SFRML+RLRVLR +ENPLEVPPR
Sbjct: 456 NIGNNFADMRSLPRSIGNLELLEELDISNNQIRVLPESFRMLTRLRVLRAEENPLEVPPR 515

Query: 366 NIVEMGAQAVVQYMADLVEKR---DAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDYVKA 421
            I E GAQAVVQYM +LVEKR   D K QP+KQKKSW ++CFFS+SNKRKR+G+DYVK 
Sbjct: 516 EIAEKGAQAVVQYMDELVEKREKKDVKAQPLKQKKSWAQICFFSKSNKRKRDGVDYVKT 574


>gi|357484257|ref|XP_003612416.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355513751|gb|AES95374.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 585

 Score =  573 bits (1477), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 281/374 (75%), Positives = 329/374 (87%), Gaps = 6/374 (1%)

Query: 54  FRNKVPIM---IMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPD 110
           F +K  IM   +      GQDG+KLSLIKLAS+IEVS+KKGTRDL LQ KLMD ++WLPD
Sbjct: 212 FSSKPQIMDSSLKSTASAGQDGDKLSLIKLASIIEVSAKKGTRDLKLQGKLMDQVDWLPD 271

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           SIGKLSSLV+LDLSENRIVA+P+TIGGLSSL KLDLH+NRI E+PDS+G+LLSLV+L LR
Sbjct: 272 SIGKLSSLVTLDLSENRIVAIPSTIGGLSSLTKLDLHSNRITEIPDSVGNLLSLVHLYLR 331

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           GN ++ LP ++SRL+RLEELD+ SN ++ LPDSIGSL+SLK L VETND+EE+P++IG C
Sbjct: 332 GNSLTTLPASVSRLIRLEELDVSSNLITVLPDSIGSLVSLKVLNVETNDIEEIPYSIGNC 391

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           SSLREL  DYN+LKALPEA+GKI +LE+LSVRYNNIKQLPTTMS+L +L+EL+VSFNELE
Sbjct: 392 SSLRELHADYNKLKALPEALGKIESLEILSVRYNNIKQLPTTMSTLINLKELNVSFNELE 451

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           S+PESLCFAT+LVKMNIGNNFAD+R LPRSIGNLE+LEE+DISNNQIRVLPDSFRML+ L
Sbjct: 452 SIPESLCFATSLVKMNIGNNFADMRHLPRSIGNLELLEEMDISNNQIRVLPDSFRMLTNL 511

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT---QPVKQKKSWVEMCFFSR 407
           RVLRV+ENPLEVPPR I E GAQAVVQYMA+ VEKRD K    QP+KQKKSW  +CFFSR
Sbjct: 512 RVLRVEENPLEVPPREIAEKGAQAVVQYMAEFVEKRDKKDVKPQPLKQKKSWANICFFSR 571

Query: 408 SNKRKRNGMDYVKA 421
           +NKRKR+G DYVKA
Sbjct: 572 NNKRKRDGADYVKA 585


>gi|356561015|ref|XP_003548781.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 548

 Score =  555 bits (1429), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 274/362 (75%), Positives = 323/362 (89%), Gaps = 4/362 (1%)

Query: 62  IMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSL 121
           I+     G+D  KLSLIKLASL+EVS+KKGTR+L LQNKLMD ++WLPDSIGKLSSL+ L
Sbjct: 189 IIPASTSGED--KLSLIKLASLMEVSAKKGTRELILQNKLMDQVDWLPDSIGKLSSLIKL 246

Query: 122 DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           DLSENRI  +P+TIGGLSSL  L+LH+N+I ELP+ +GDLLSLVYL++ GNQ+S+LP +L
Sbjct: 247 DLSENRITVLPSTIGGLSSLTSLNLHSNKIAELPECVGDLLSLVYLNVGGNQLSSLPASL 306

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            RLV LEELDL SN LS LPD+IGSL+SLK L VETND+EE+PH+IG+C +LREL  DYN
Sbjct: 307 GRLVHLEELDLSSNQLSVLPDAIGSLVSLKVLNVETNDIEEIPHSIGRCVALRELCADYN 366

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           RLKALPEAVGKI +LEVLSVRYNN+KQLPTTMSSLS+L+EL+VSFNELE VPESLCFAT+
Sbjct: 367 RLKALPEAVGKIESLEVLSVRYNNVKQLPTTMSSLSNLKELNVSFNELEYVPESLCFATS 426

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           LVKMNIGNNFAD+R+LPRSIGNLEMLEELDISNNQIRVLPDSFRML+RLRVL+V+ENPLE
Sbjct: 427 LVKMNIGNNFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFRMLTRLRVLKVEENPLE 486

Query: 362 VPPRNIVEMGAQAVVQYMADLVEKRDAKTQP-VKQKKSWV-EMCFFSRSNKRKRNGMDYV 419
           +PPR++ E GAQAVV+YMADLVEK+DAK QP +K+KK W   MCFFS+SNKRKR+G+D+V
Sbjct: 487 IPPRHVAEKGAQAVVRYMADLVEKKDAKLQPLIKKKKGWAHHMCFFSKSNKRKRDGVDFV 546

Query: 420 KA 421
           K 
Sbjct: 547 KT 548


>gi|356531327|ref|XP_003534229.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Glycine max]
          Length = 551

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 271/354 (76%), Positives = 320/354 (90%), Gaps = 2/354 (0%)

Query: 70  QDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV 129
           Q G+KLSLIKLASLIEVS+KKGTR+L LQNKLMD ++WLPDSIGKLSSL+ LDLSENRI+
Sbjct: 198 QSGDKLSLIKLASLIEVSAKKGTRELILQNKLMDQVDWLPDSIGKLSSLIKLDLSENRIM 257

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
            +P+TIG LSSL  LDLH+N+I ELP+ +GDLLSLVYL++ GNQ+S+LP +L RLV LEE
Sbjct: 258 VLPSTIGSLSSLTSLDLHSNKIAELPECVGDLLSLVYLNVGGNQLSSLPASLGRLVHLEE 317

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL SN LS LPD+IGSL+SLK L VETND+EE+PH+IG+C +L+EL  DYNRLKALPEA
Sbjct: 318 LDLSSNQLSVLPDAIGSLVSLKILNVETNDIEEIPHSIGRCVALKELCADYNRLKALPEA 377

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           VGKI +LEVLSVRYNN+KQLPTTMSSLS+L+EL+VSFNELE VPESLCFAT+LVKMNIGN
Sbjct: 378 VGKIESLEVLSVRYNNVKQLPTTMSSLSNLKELNVSFNELEYVPESLCFATSLVKMNIGN 437

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           NFAD+R+LPRSIGNLEMLEELDISNNQIRVLPDSF ML+RLRVL+V+ENPLE+PPR++ E
Sbjct: 438 NFADMRSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLTRLRVLKVEENPLEIPPRHVAE 497

Query: 370 MGAQAVVQYMADLVEKRDAKTQP-VKQKKSWV-EMCFFSRSNKRKRNGMDYVKA 421
            GAQAVV+YMADLVEK+D K+QP +K+KK W   MCFFS+SNKRKR+G+D+VK 
Sbjct: 498 KGAQAVVKYMADLVEKKDVKSQPLIKKKKGWAHHMCFFSKSNKRKRDGVDFVKT 551


>gi|297802402|ref|XP_002869085.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297314921|gb|EFH45344.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  533 bits (1374), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 274/363 (75%), Positives = 318/363 (87%)

Query: 57  KVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLS 116
           K P ++      G DGEKLSLIKLASLIEVS+KK T ++NLQNKL D +EWLPDS+GKLS
Sbjct: 188 KPPQILDSTLTAGNDGEKLSLIKLASLIEVSAKKATPEINLQNKLTDQVEWLPDSLGKLS 247

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           SL SLDLSEN IV +P TIGGLSSL KLDLH+NRI +LP+SIG+LL+LVYL+L  NQ+S 
Sbjct: 248 SLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESIGELLNLVYLNLGSNQLSL 307

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           LP A SRLVRLEELDL  NNL  LP+SIGSL+SLKKL VETND+EE+P++IG CSSL+EL
Sbjct: 308 LPSAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLKEL 367

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
           R DYN+LKALPEA+GKI TLE+LSVRYNNI+QLPTTMSSL++L+ELDVSFNELESVPESL
Sbjct: 368 RADYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLANLKELDVSFNELESVPESL 427

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
           CFATTLVK+NIGNNFAD+ +LPRSIGNLEMLEELDISNNQIRVLPDSF+ML++LRV R Q
Sbjct: 428 CFATTLVKLNIGNNFADMISLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQ 487

Query: 357 ENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGM 416
           ENPL+VPPR+I E G QAVVQYM DLVE R+AK+  VK KKSWV+MCFFS+SNKRK++ M
Sbjct: 488 ENPLQVPPRDIAEKGPQAVVQYMNDLVETRNAKSLMVKPKKSWVQMCFFSKSNKRKQSSM 547

Query: 417 DYV 419
           + V
Sbjct: 548 EIV 550


>gi|15237011|ref|NP_195272.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
 gi|5830789|emb|CAB54875.1| putative protein [Arabidopsis thaliana]
 gi|7270498|emb|CAB80263.1| putative protein [Arabidopsis thaliana]
 gi|18252197|gb|AAL61931.1| putative protein [Arabidopsis thaliana]
 gi|22136104|gb|AAM91130.1| putative protein [Arabidopsis thaliana]
 gi|57868150|gb|AAW57413.1| plant intracellular Ras-group-related LRR protein 4 [Arabidopsis
           thaliana]
 gi|332661119|gb|AEE86519.1| plant intracellular ras group-related LRR 4 [Arabidopsis thaliana]
          Length = 549

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 272/361 (75%), Positives = 317/361 (87%)

Query: 59  PIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSL 118
           P ++      G DGEKLSLIKLASLIEVS+KK T+++NLQNKL + +EWLPDS+GKLSSL
Sbjct: 189 PQILDSTLTTGNDGEKLSLIKLASLIEVSAKKATQEINLQNKLTEQLEWLPDSLGKLSSL 248

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
            SLDLSEN IV +P TIGGLSSL KLDLH+NRI +LP+SIG+LL+LVYL+L  NQ+S+LP
Sbjct: 249 TSLDLSENHIVVLPNTIGGLSSLTKLDLHSNRIGQLPESIGELLNLVYLNLGSNQLSSLP 308

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            A SRLVRLEELDL  NNL  LP+SIGSL+SLKKL VETND+EE+P++IG CSSL ELR 
Sbjct: 309 SAFSRLVRLEELDLSCNNLPILPESIGSLVSLKKLDVETNDIEEIPYSIGGCSSLIELRA 368

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           DYN+LKALPEA+GKI TLE+LSVRYNNI+QLPTTMSSL+SL+ELDVSFNELESVPESLCF
Sbjct: 369 DYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLASLKELDVSFNELESVPESLCF 428

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ATTLVK+NIGNNFAD+ +LPRSIGNLEMLEELDISNNQIRVLPDSF+ML++LRV R QEN
Sbjct: 429 ATTLVKLNIGNNFADMVSLPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQEN 488

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDY 418
           PL +PPR+I E G QAVVQYM DLVE R+AK+  VK KKSWV+MCFFS+SNKRK++ M+ 
Sbjct: 489 PLHIPPRDIAEKGPQAVVQYMNDLVETRNAKSLMVKPKKSWVQMCFFSKSNKRKQSSMEI 548

Query: 419 V 419
           V
Sbjct: 549 V 549


>gi|414869438|tpg|DAA47995.1| TPA: hypothetical protein ZEAMMB73_132219 [Zea mays]
          Length = 577

 Score =  520 bits (1338), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 247/349 (70%), Positives = 301/349 (86%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G D +KL+LIKLAS+IEV++KKG RDLNLQ KLM+ IEWLPDSIGKL+ LV+LD+SENRI
Sbjct: 226 GDDNQKLTLIKLASMIEVAAKKGARDLNLQGKLMNQIEWLPDSIGKLTGLVTLDISENRI 285

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P  IG LSSL KLDLHANRI +LP+SIGDL +L+YLDLRGNQ+++LP +L RLV+LE
Sbjct: 286 LALPEAIGMLSSLAKLDLHANRIAQLPESIGDLSNLIYLDLRGNQLASLPASLGRLVKLE 345

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+ +N+L+SLPDSIGSL  LKKLI ETNDL+ELP+TIG C SL ELRV YN LKALPE
Sbjct: 346 ELDVSANHLTSLPDSIGSLTRLKKLIAETNDLDELPYTIGNCVSLVELRVGYNHLKALPE 405

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGK+ +LEVLSVRYN I+ LPTTM+SL+ L+E+D SFNELES+PE+ CF T+L+K+N+G
Sbjct: 406 AVGKLESLEVLSVRYNTIRGLPTTMASLTKLKEVDASFNELESIPENFCFVTSLIKLNVG 465

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFADL++LPRSIGNLEMLEELDISNNQIRVLPDSF  L RLRVLR +ENPL+VPPR++ 
Sbjct: 466 NNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQRLRVLRAEENPLQVPPRDVA 525

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
             GAQA VQYMA+ V K+  ++QP+K KK+W + CFFSR NKRK + +D
Sbjct: 526 LKGAQAAVQYMAEYVAKKATRSQPMKTKKTWAQFCFFSRPNKRKHDRID 574


>gi|42408795|dbj|BAD10056.1| putative PSR9 [Oryza sativa Japonica Group]
 gi|125562149|gb|EAZ07597.1| hypothetical protein OsI_29848 [Oryza sativa Indica Group]
          Length = 576

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/349 (71%), Positives = 298/349 (85%), Gaps = 1/349 (0%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G D EKLSLIKLAS+IEVS+KKG RDLNLQ KLM  IEWLPDSIGKL+ LV+LD+SENR+
Sbjct: 226 GDDNEKLSLIKLASMIEVSAKKGARDLNLQGKLMAQIEWLPDSIGKLTGLVTLDISENRL 285

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P  IG L SL KLD+HANRI +LP+SIGDL SL+YL++RGNQ+S+LP ++ RL+ LE
Sbjct: 286 LALPDAIGKLFSLAKLDIHANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLE 345

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+GSN LSSLPDSIGSL  LKKLIVETNDL+ELP+TIG C SL EL+  YN LKALPE
Sbjct: 346 ELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPE 405

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGK+  LE+LSVRYNN++ LPTTM+SL+ L+E+DVSFNELES+PE+ CFAT+L+K+N+G
Sbjct: 406 AVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVG 465

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFADL+ LPRSIGNLEMLEELD+SNNQIRVLPDSF  L  LRVLR +ENPL+VPPR+I 
Sbjct: 466 NNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIA 525

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
             GAQAVVQYM+D   KR  K++P+K KK+WV  CFFSR NKRK + +D
Sbjct: 526 LKGAQAVVQYMSD-ASKRTTKSEPMKPKKTWVHFCFFSRPNKRKHDRID 573


>gi|125603982|gb|EAZ43307.1| hypothetical protein OsJ_27903 [Oryza sativa Japonica Group]
          Length = 576

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 249/349 (71%), Positives = 298/349 (85%), Gaps = 1/349 (0%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G D EKLSLIKLAS+IEVS+KKG RDLNLQ KLM  IEWLPDSIGKL+ LV+LD+SENR+
Sbjct: 226 GDDNEKLSLIKLASMIEVSAKKGARDLNLQGKLMAQIEWLPDSIGKLTGLVTLDISENRL 285

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P  IG L SL KLD+HANRI +LP+SIGDL SL+YL++RGNQ+S+LP ++ RL+ LE
Sbjct: 286 LALPDAIGKLFSLAKLDIHANRISQLPESIGDLRSLIYLNMRGNQLSSLPSSIGRLLNLE 345

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+GSN LSSLPDSIGSL  LKKLIVETNDL+ELP+TIG C SL EL+  YN LKALPE
Sbjct: 346 ELDVGSNGLSSLPDSIGSLTRLKKLIVETNDLDELPYTIGHCVSLVELQAGYNHLKALPE 405

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGK+  LE+LSVRYNN++ LPTTM+SL+ L+E+DVSFNELES+PE+ CFAT+L+K+N+G
Sbjct: 406 AVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFATSLIKLNVG 465

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFADL+ LPRSIGNLEMLEELD+SNNQIRVLPDSF  L  LRVLR +ENPL+VPPR+I 
Sbjct: 466 NNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPLQVPPRDIA 525

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
             GAQAVVQYM+D   KR  K++P+K KK+WV  CFFSR NKRK + +D
Sbjct: 526 LKGAQAVVQYMSD-ASKRTTKSEPMKPKKTWVHFCFFSRPNKRKHDRID 573


>gi|20148766|gb|AAM10777.1| PSR9 [Brassica nigra]
          Length = 535

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 255/355 (71%), Positives = 304/355 (85%), Gaps = 4/355 (1%)

Query: 57  KVPIMIMCMCCVGQ----DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSI 112
           + P ++      G+    DGEKLSLIKLASLIEVS+KK T++LNLQNKL   +EWLPDSI
Sbjct: 178 RTPQIVDSTLTAGKFADNDGEKLSLIKLASLIEVSAKKATKELNLQNKLSAQVEWLPDSI 237

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
           GKLS+L SLDLSEN IV +P TIGGL SL  LDL +NRI +LP+SIG+LL+LVYLDL  N
Sbjct: 238 GKLSTLTSLDLSENNIVVLPNTIGGLVSLTNLDLRSNRINQLPESIGELLNLVYLDLSSN 297

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           Q+S+LP + SRL++LEEL+L  NNL  LP+S+GSL +LKKL VETND+EE+P++IG CSS
Sbjct: 298 QLSSLPSSFSRLLQLEELNLSCNNLPVLPESVGSLANLKKLDVETNDIEEIPYSIGGCSS 357

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L+ELR DYN+LKALPEA+GKI TLE+LSVRYNNI+QLPTTMSSL+SLRELDVSFNELESV
Sbjct: 358 LKELRADYNKLKALPEAIGKITTLEILSVRYNNIRQLPTTMSSLASLRELDVSFNELESV 417

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           PESLCFAT+LVK+N+GNNFAD+ +LPRS+GNLEMLEELDISNNQIRVLP+SFR L++LRV
Sbjct: 418 PESLCFATSLVKLNVGNNFADMISLPRSLGNLEMLEELDISNNQIRVLPESFRSLTKLRV 477

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSR 407
              QENPL+VPPR+I E G QAVVQYM DLVE R+AK+  VK KKSWV+MCFFS+
Sbjct: 478 FASQENPLQVPPRDIAEKGPQAVVQYMNDLVETRNAKSLVVKPKKSWVQMCFFSK 532


>gi|242079987|ref|XP_002444762.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
 gi|241941112|gb|EES14257.1| hypothetical protein SORBIDRAFT_07g027580 [Sorghum bicolor]
          Length = 578

 Score =  506 bits (1304), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 242/346 (69%), Positives = 296/346 (85%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G   EKL+LIKLAS+IEV++KKG RDLNLQ KLM+ IEWLPDSIGKL+ LV+LD+SENRI
Sbjct: 229 GDGNEKLTLIKLASMIEVAAKKGARDLNLQGKLMNQIEWLPDSIGKLTGLVTLDISENRI 288

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           + +P  IG LSSL KLD H+NRI  LPDSIGDL +L+YLDLRGNQ+++LP +L RLV+LE
Sbjct: 289 LTLPEAIGRLSSLAKLDAHSNRISHLPDSIGDLSNLIYLDLRGNQLASLPPSLGRLVKLE 348

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+ +N+L+SLPD+IGSL  LKKLIVETN+L+ELP+TIG C SL ELR  YN LKALPE
Sbjct: 349 ELDVSANHLTSLPDAIGSLKHLKKLIVETNNLDELPYTIGNCVSLVELRAGYNHLKALPE 408

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGK+ +LEVLSVRYN+I+ LPTTM+SL+ L+E+D SFNELES+PE+ CF T+LVK+N+G
Sbjct: 409 AVGKLESLEVLSVRYNSIRGLPTTMASLTKLKEVDASFNELESIPENFCFVTSLVKLNVG 468

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFADL++LPRSIGNLEMLEELDISNNQIRVLPDSF  L  LRVLR +ENPL+VPPR++ 
Sbjct: 469 NNFADLQSLPRSIGNLEMLEELDISNNQIRVLPDSFGNLQHLRVLRAEENPLQVPPRDVA 528

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRN 414
             GAQA VQYM++ V K+  ++QP K KK+WV++CFFSR NKRK +
Sbjct: 529 LKGAQAAVQYMSEYVTKKATRSQPTKTKKTWVQLCFFSRPNKRKHD 574


>gi|326519689|dbj|BAK00217.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 569

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 239/349 (68%), Positives = 293/349 (83%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G D EK+SLIKLAS+IEV++KKG R+LN   KLM  IEW+PDSIGKL+ LV+LD+SENR+
Sbjct: 216 GDDKEKMSLIKLASMIEVAAKKGARELNFNGKLMAQIEWIPDSIGKLTGLVTLDISENRL 275

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           VA+P TIG LSSL KLDLHANRI +LPDS+GDL SL+ LDLRGNQ+++LP ++ RL  LE
Sbjct: 276 VALPPTIGKLSSLTKLDLHANRIAQLPDSVGDLRSLICLDLRGNQLTSLPSSIGRLANLE 335

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+G+N++ +LPDS+GSL  LKKL+VETNDL+ELP+TIG C SL EL+  YN LKALPE
Sbjct: 336 ELDVGANHIVALPDSVGSLTRLKKLLVETNDLDELPYTIGHCVSLVELQAGYNHLKALPE 395

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGK+ +LE+LSVRYNNI+ LPTTM+SL+ L+E+D SFNELES+PE+ CF T+L+K+N+G
Sbjct: 396 AVGKLESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNELESIPENFCFVTSLIKLNVG 455

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFAD+++LPRSIGNLEMLEELDISNNQIRVLPDSF ML  LRVLR +ENPL+VPPR I 
Sbjct: 456 NNFADMKSLPRSIGNLEMLEELDISNNQIRVLPDSFGMLQHLRVLRAEENPLQVPPREIA 515

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMD 417
             GAQ  VQYMA+   K+  K QPVK KK+W + CFFSR NKRK + +D
Sbjct: 516 LKGAQDAVQYMAEYAAKKTTKPQPVKAKKNWAQFCFFSRPNKRKHDRID 564


>gi|357148421|ref|XP_003574757.1| PREDICTED: protein lap1-like [Brachypodium distachyon]
          Length = 571

 Score =  504 bits (1297), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 243/368 (66%), Positives = 295/368 (80%)

Query: 50  GSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLP 109
           G++   +     ++     G D EK SLIKLAS+IEV++KKG RDLN Q KLM  IEW+P
Sbjct: 201 GTVTANSAKSAAVLVDGSYGDDKEKFSLIKLASMIEVAAKKGARDLNFQGKLMAQIEWIP 260

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           DSIGKL  LV+LD+SENR+VA+P  IG LSSL KLDLHANRI  LP+SIGDL SL+ LDL
Sbjct: 261 DSIGKLIGLVTLDISENRLVALPEAIGKLSSLTKLDLHANRIALLPESIGDLRSLICLDL 320

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
           RGNQ+++LP +L RL+ LEELD+G+N + +LPDSIGSL  LKKL+VETNDL+ELP+TIG 
Sbjct: 321 RGNQLTSLPSSLGRLMNLEELDMGANRIVTLPDSIGSLTRLKKLMVETNDLDELPYTIGH 380

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
           C SL EL+  YN LKALPEAVGK+ +LE+LSVRYNNI+ LPTTM+SL+ L+E+D SFNEL
Sbjct: 381 CVSLVELQAGYNHLKALPEAVGKLESLEILSVRYNNIRSLPTTMASLTKLKEVDASFNEL 440

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           ES+PE+ CF T+LVK+N+GNNFAD++ LPRSIGNLEMLEELDISNNQIRVLPDSF  L  
Sbjct: 441 ESIPENFCFVTSLVKLNVGNNFADMQKLPRSIGNLEMLEELDISNNQIRVLPDSFGNLHH 500

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
           LRVLR +ENPL+VPPR +   GAQAVVQYMAD   K   K+Q +K KK+W + CFFSR N
Sbjct: 501 LRVLRAEENPLQVPPREVALKGAQAVVQYMADHTTKNATKSQTIKTKKTWAQFCFFSRPN 560

Query: 410 KRKRNGMD 417
           KRK + +D
Sbjct: 561 KRKHDRID 568


>gi|357517589|ref|XP_003629083.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355523105|gb|AET03559.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  501 bits (1289), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 255/358 (71%), Positives = 314/358 (87%), Gaps = 5/358 (1%)

Query: 69  GQD--GE-KLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
           G+D  GE KLSLIKLA+LIE+S+KKGT +LNLQNKL D ++WLPDS+GKLS+L++LDLS+
Sbjct: 216 GEDNGGENKLSLIKLANLIEISAKKGTCELNLQNKLKDQVDWLPDSLGKLSTLLTLDLSQ 275

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRI+ +P TIG LSSL  LDLH+N+I +LPDSI +L++L +L++  N +S+LP +LS+L 
Sbjct: 276 NRIITLPFTIGNLSSLTYLDLHSNQITQLPDSIENLINLTHLNVSANMLSSLPHSLSKLA 335

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           RLE+L+L SN LS LPDSIGSL++LK L +ETND+EE+PH+IG C SL+EL  DYNRLKA
Sbjct: 336 RLEKLNLNSNQLSLLPDSIGSLVNLKILNIETNDIEEIPHSIGHCCSLKELCADYNRLKA 395

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEAVG+I +LE+LSVRYNNIKQLPTTMS+L +L+ELDVSFNELE VPESLCFAT +VKM
Sbjct: 396 LPEAVGQIRSLEILSVRYNNIKQLPTTMSNLINLKELDVSFNELEFVPESLCFATKIVKM 455

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+GNNFAD+R+LPRSIGNLEMLEELDISNNQI  LP SFRML+RL+VLRV+ENPLEVPPR
Sbjct: 456 NVGNNFADMRSLPRSIGNLEMLEELDISNNQIHALPYSFRMLTRLQVLRVEENPLEVPPR 515

Query: 366 NIVEMGAQAVVQYMADLVEKRDAKTQP-VKQKKSWV-EMCFFSRSNKRKRNGMDYVKA 421
           ++VE GAQAVV YMA+LVEK D K+QP +KQKKSW  ++CFFS+SN RKR G+DY+KA
Sbjct: 516 HVVEKGAQAVVHYMAELVEKGDVKSQPLIKQKKSWTDQICFFSKSNTRKRGGVDYIKA 573


>gi|449434074|ref|XP_004134821.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
 gi|449524314|ref|XP_004169168.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Cucumis
           sativus]
          Length = 574

 Score =  499 bits (1285), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 245/354 (69%), Positives = 304/354 (85%), Gaps = 2/354 (0%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G++GEK +L+ LAS+IE  +KKG+  L+L+NKLM+ +EWLP+SIGKL++LVSLDLSENR+
Sbjct: 222 GENGEKYNLMALASVIE-KAKKGSSALDLRNKLMNQVEWLPESIGKLTNLVSLDLSENRL 280

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
             +P  IG LS L+KLDLHAN++ ELP S  DL SLVYLDLRGNQ+ +LPV+  +L+ LE
Sbjct: 281 ATLPEAIGALSQLEKLDLHANKLSELPSSFTDLASLVYLDLRGNQLVSLPVSFGKLIHLE 340

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELDL SN L+SLP+SIG+L+ L+KL +ETN++EE+PHTIG+C+SLREL  DYNRLKALPE
Sbjct: 341 ELDLSSNMLTSLPESIGNLVKLRKLNLETNNIEEIPHTIGRCASLRELTADYNRLKALPE 400

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           AVGKI TLE+LSVRYNNIKQLPTTM+SL++LRELDVSFNELESVPESLCFAT LVKMNIG
Sbjct: 401 AVGKIETLEILSVRYNNIKQLPTTMASLANLRELDVSFNELESVPESLCFATNLVKMNIG 460

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NNFADL++LP+SIGNLEMLEEL+ISNNQIR LPDSFRML+RLRVLR +ENP EVPPR+I 
Sbjct: 461 NNFADLQSLPKSIGNLEMLEELNISNNQIRFLPDSFRMLTRLRVLRAEENPFEVPPRHIF 520

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVK-QKKSWVEMCFFSRSNKRKRNGMDYVKA 421
           E GAQAVVQYM DL E R+ +T+PVK +K+ W  M     SN+R+ + +++++A
Sbjct: 521 EKGAQAVVQYMIDLHENRNVRTEPVKRRKRRWWHMFNSCNSNQRQSDPINHMRA 574


>gi|15227838|ref|NP_179336.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
 gi|57868152|gb|AAW57414.1| plant intracellular Ras-group-related LRR protein 5 [Arabidopsis
           thaliana]
 gi|110737388|dbj|BAF00638.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251531|gb|AEC06625.1| ras group-related LRR 5 protein [Arabidopsis thaliana]
          Length = 526

 Score =  483 bits (1243), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 247/343 (72%), Positives = 298/343 (86%), Gaps = 1/343 (0%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
            G DGEKLSLIKLASLIEVS+KK T++LNLQ++LMD +EWLPDS+GKLSSLV LDLSEN 
Sbjct: 182 AGNDGEKLSLIKLASLIEVSAKKATQELNLQHRLMDQLEWLPDSLGKLSSLVRLDLSENC 241

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I+ +PATIGGL SL +LDLH+NRI +LP+SIGDLL+LV L+L GNQ+S+LP + +RL+ L
Sbjct: 242 IMVLPATIGGLISLTRLDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSSFNRLIHL 301

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           EELDL SN+LS LP+SIGSL+SLKKL VETN++EE+PH+I  CSS+ ELR DYNRLKALP
Sbjct: 302 EELDLSSNSLSILPESIGSLVSLKKLDVETNNIEEIPHSISGCSSMEELRADYNRLKALP 361

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           EAVGK+ TLE+L+VRYNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC+A TLVK+NI
Sbjct: 362 EAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKTLVKLNI 421

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           GNNFA+LR+LP  IGNLE LEELD+SNNQIR LP SF+ LS LRVL+ ++NPLE  PR+I
Sbjct: 422 GNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQNPLEELPRDI 481

Query: 368 VEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV-EMCFFSRSN 409
            E GAQAVVQYM DLVE R+ K+Q  K KKSWV  +CFF +S+
Sbjct: 482 TEKGAQAVVQYMNDLVEARNTKSQRTKPKKSWVNSICFFCKSS 524


>gi|297832352|ref|XP_002884058.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297329898|gb|EFH60317.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 532

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 246/343 (71%), Positives = 296/343 (86%), Gaps = 1/343 (0%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
           VG DGEKLSLIKLASLIEVS+KK T +LNLQ+KLMD +EWLP+S+GKLSSLV LDLSEN 
Sbjct: 188 VGHDGEKLSLIKLASLIEVSAKKATPELNLQHKLMDQLEWLPESLGKLSSLVRLDLSENC 247

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I+ +PATIGGL SL +LDLH+NRI +LP+SIGDLL+L+ L+L GNQ+S LP A SRL+ L
Sbjct: 248 IMVLPATIGGLLSLTRLDLHSNRIGQLPESIGDLLNLINLNLSGNQLSFLPSAFSRLIHL 307

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           EELDL SN+L+ LP+ IGSL+SLKKL VETN++EE+PH+I  CS L+ELR DYNRLKALP
Sbjct: 308 EELDLSSNSLTILPEYIGSLVSLKKLDVETNNIEEIPHSISGCSFLKELRADYNRLKALP 367

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           EAVGK+ TLE+L+VRYNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC+A TLVK+NI
Sbjct: 368 EAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKTLVKLNI 427

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           GNNFA+LR+LP  IGNLE LEELD+SNNQIR LP SF+ LS+LRVL  ++NPLE  PR+I
Sbjct: 428 GNNFANLRSLPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSQLRVLHTEQNPLEELPRDI 487

Query: 368 VEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV-EMCFFSRSN 409
            + GAQAVVQYM DLVE R+ K+Q  K KKSWV  +CFF +S+
Sbjct: 488 TQKGAQAVVQYMNDLVEARNTKSQGTKPKKSWVNSICFFCKSS 530


>gi|357147505|ref|XP_003574369.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 535

 Score =  418 bits (1075), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 202/328 (61%), Positives = 256/328 (78%)

Query: 73  EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVP 132
           +KLSLI++ASLIE S+KKG  +LNL+ KL+D IEWLP S+GKL  +  LD+SENRI+A+P
Sbjct: 188 QKLSLIQVASLIESSAKKGITELNLRGKLVDQIEWLPVSLGKLQDVTELDISENRIMALP 247

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
           +TIG L  L KLDLH+N++I LPDS G+L SL+ LDL  NQ+ +LP +   L  L  LDL
Sbjct: 248 STIGSLRYLTKLDLHSNQLINLPDSFGELSSLIDLDLHANQLKSLPTSFGNLTSLANLDL 307

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            SN    LPD +G L +L++LI ETN+LEELP+TIG C SL ELR+D+N+LKALPEA+GK
Sbjct: 308 SSNQFRILPDCLGKLTNLRRLIAETNELEELPYTIGSCMSLVELRLDFNQLKALPEAIGK 367

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  LE+L++ YN IK LPTT+ SL+ LRELDVSFNE+E +PES+CFAT+LVK+N+  NFA
Sbjct: 368 LEKLEILTLHYNRIKGLPTTIGSLTRLRELDVSFNEVEGIPESICFATSLVKLNVSRNFA 427

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           DLRALPRSIGNLEMLEELDIS+NQIR LPDSF+ L++LRV    E PLEVPPR ++++GA
Sbjct: 428 DLRALPRSIGNLEMLEELDISSNQIRALPDSFQFLAKLRVFHADETPLEVPPREVIKLGA 487

Query: 373 QAVVQYMADLVEKRDAKTQPVKQKKSWV 400
           QAVVQY+ D+V  R A  +   Q   W 
Sbjct: 488 QAVVQYVVDMVASRGASQKETDQASFWA 515


>gi|19225010|gb|AAL86486.1|AC077693_25 putative leucine-rich repeat protein [Oryza sativa Japonica Group]
 gi|31433621|gb|AAP55113.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|78709035|gb|ABB48010.1| Leucine Rich Repeat family protein, expressed [Oryza sativa
           Japonica Group]
 gi|125575769|gb|EAZ17053.1| hypothetical protein OsJ_32547 [Oryza sativa Japonica Group]
 gi|215734963|dbj|BAG95685.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 543

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/333 (61%), Positives = 260/333 (78%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
            G D EKLSLI++ASLIE S+KKG  +L+L+ KL+D IEWLP S+GKL  +  LDLSENR
Sbjct: 192 AGTDMEKLSLIQVASLIESSAKKGITELSLRGKLVDQIEWLPVSLGKLQDVTELDLSENR 251

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I+A+P+TIG L  L KLDLH+N++I LPD+ G+L +L+ LDL  NQ+ +LP +   L  L
Sbjct: 252 IMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSL 311

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
             LDL SN L +LPD +G L +L++LIVETN+LEELP+TIG C+SL ELR+D+N+LKALP
Sbjct: 312 ANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALP 371

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           EA+GK+  LE+L++ YN IK LPTT+ SLS LRELDVSFNE+E +PE++CFAT+LVK+N+
Sbjct: 372 EAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNL 431

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             NFADLRALP+SIGNLEMLEELDIS+NQIRVLPDSFR LSRLRV    E PLE PPR +
Sbjct: 432 SRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREV 491

Query: 368 VEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
           V++GAQAVV+YM DL   R    +   +   W 
Sbjct: 492 VKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWT 524


>gi|125533033|gb|EAY79598.1| hypothetical protein OsI_34739 [Oryza sativa Indica Group]
          Length = 543

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/333 (61%), Positives = 260/333 (78%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
            G D EKLSLI++ASLIE S+KKG  +L+L+ KL+D IEWLP S+GKL  +  LDLSENR
Sbjct: 192 AGTDMEKLSLIQVASLIESSAKKGITELSLRGKLVDQIEWLPVSLGKLQDVTELDLSENR 251

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I+A+P+TIG L  L KLDLH+N++I LPD+ G+L +L+ LDL  NQ+ +LP +   L  L
Sbjct: 252 IMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSL 311

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
             LDL SN L +LPD +G L +L++LIVETN+LEELP+TIG C+SL ELR+D+N+LKALP
Sbjct: 312 ANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALP 371

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           EA+GK+  LE+L++ YN IK LPTT+ SLS LRELDVSFNE+E +PE++CFAT+LVK+N+
Sbjct: 372 EAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNL 431

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             NFADLRALP+SIGNLEMLEELDIS+NQIRVLPDSFR LSRLRV    E PLE PPR +
Sbjct: 432 SRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREV 491

Query: 368 VEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
           V++GAQAVV+YM DL   R    +   +   W 
Sbjct: 492 VKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWT 524


>gi|297610977|ref|NP_001065462.2| Os10g0572300 [Oryza sativa Japonica Group]
 gi|255679659|dbj|BAF27299.2| Os10g0572300 [Oryza sativa Japonica Group]
          Length = 396

 Score =  416 bits (1070), Expect = e-114,   Method: Compositional matrix adjust.
 Identities = 206/333 (61%), Positives = 260/333 (78%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
            G D EKLSLI++ASLIE S+KKG  +L+L+ KL+D IEWLP S+GKL  +  LDLSENR
Sbjct: 45  AGTDMEKLSLIQVASLIESSAKKGITELSLRGKLVDQIEWLPVSLGKLQDVTELDLSENR 104

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I+A+P+TIG L  L KLDLH+N++I LPD+ G+L +L+ LDL  NQ+ +LP +   L  L
Sbjct: 105 IMALPSTIGSLRYLTKLDLHSNQLINLPDAFGELSNLIDLDLHANQLKSLPSSFGNLTSL 164

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
             LDL SN L +LPD +G L +L++LIVETN+LEELP+TIG C+SL ELR+D+N+LKALP
Sbjct: 165 ANLDLSSNMLKALPDCLGKLANLRRLIVETNELEELPYTIGSCTSLVELRLDFNQLKALP 224

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           EA+GK+  LE+L++ YN IK LPTT+ SLS LRELDVSFNE+E +PE++CFAT+LVK+N+
Sbjct: 225 EAIGKLEKLEILTLHYNRIKGLPTTVGSLSRLRELDVSFNEVEVIPENICFATSLVKLNL 284

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             NFADLRALP+SIGNLEMLEELDIS+NQIRVLPDSFR LSRLRV    E PLE PPR +
Sbjct: 285 SRNFADLRALPKSIGNLEMLEELDISSNQIRVLPDSFRCLSRLRVFHADETPLEFPPREV 344

Query: 368 VEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
           V++GAQAVV+YM DL   R    +   +   W 
Sbjct: 345 VKLGAQAVVKYMNDLNAARGTNQKKTDRGSFWT 377


>gi|449533090|ref|XP_004173510.1| PREDICTED: protein lap1-like, partial [Cucumis sativus]
          Length = 521

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/341 (59%), Positives = 264/341 (77%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           + EKL+L+K+A+LIE  +K G+  LNL+ KLMD +E LP SIGKL  LV LDLSEN+I+A
Sbjct: 168 ETEKLNLMKVAALIENIAKSGSTVLNLKGKLMDKMELLPISIGKLFDLVELDLSENKIMA 227

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P  I GL SL+K ++H+N++I LPD+ G+L++L Y+DL  N++ +LP +   L  L  L
Sbjct: 228 LPPGISGLQSLRKFNIHSNQLINLPDTFGELVNLTYVDLHANRLKSLPASFGNLKNLISL 287

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DL SN  + LP+  G L SLKKL VETN+LEELP+TIG CSSL ELR+D+N +KALPEA+
Sbjct: 288 DLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIGSCSSLVELRLDFNEIKALPEAI 347

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE+L++ YN I+ LPTTM +L  L+ELDVSFNELE++PE+LCFA +L K+N+G N
Sbjct: 348 GKLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFNELETIPENLCFAVSLRKLNVGKN 407

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           FADL ALPRSIGNLEMLEELDIS NQIR LP+SFR LS+LRVL++ E PLE PPR +VE+
Sbjct: 408 FADLTALPRSIGNLEMLEELDISANQIRFLPESFRFLSKLRVLQIDETPLEEPPREVVEL 467

Query: 371 GAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKR 411
           GAQA+V+YMAD VEKRD K+QP ++   W+  C    S  R
Sbjct: 468 GAQAIVKYMADAVEKRDTKSQPTQENGFWLWFCSICCSESR 508


>gi|449461559|ref|XP_004148509.1| PREDICTED: protein lap1-like [Cucumis sativus]
          Length = 533

 Score =  414 bits (1063), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 204/341 (59%), Positives = 264/341 (77%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           + EKL+L+K+A+LIE  +K G+  LNL+ KLMD +E LP SIGKL  LV LDLSEN+I+A
Sbjct: 180 ETEKLNLMKVAALIENIAKSGSTVLNLKGKLMDKMELLPISIGKLFDLVELDLSENKIMA 239

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P  I GL SL+K ++H+N++I LPD+ G+L++L Y+DL  N++ +LP +   L  L  L
Sbjct: 240 LPPGISGLQSLRKFNIHSNQLINLPDTFGELVNLTYVDLHANRLKSLPASFGNLKNLISL 299

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DL SN  + LP+  G L SLKKL VETN+LEELP+TIG CSSL ELR+D+N +KALPEA+
Sbjct: 300 DLSSNLYTHLPEITGKLTSLKKLNVETNELEELPYTIGSCSSLVELRLDFNEIKALPEAI 359

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE+L++ YN I+ LPTTM +L  L+ELDVSFNELE++PE+LCFA +L K+N+G N
Sbjct: 360 GKLECLEILTLHYNRIRGLPTTMGNLPKLKELDVSFNELETIPENLCFAVSLRKLNVGKN 419

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           FADL ALPRSIGNLEMLEELDIS NQIR LP+SFR LS+LRVL++ E PLE PPR +VE+
Sbjct: 420 FADLTALPRSIGNLEMLEELDISANQIRFLPESFRFLSKLRVLQIDETPLEEPPREVVEL 479

Query: 371 GAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKR 411
           GAQA+V+YMAD VEKRD K+QP ++   W+  C    S  R
Sbjct: 480 GAQAIVKYMADAVEKRDTKSQPTQENGFWLWFCSICCSESR 520


>gi|224138080|ref|XP_002326513.1| predicted protein [Populus trichocarpa]
 gi|222833835|gb|EEE72312.1| predicted protein [Populus trichocarpa]
          Length = 526

 Score =  413 bits (1062), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 201/321 (62%), Positives = 261/321 (81%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           + EKLSL+K+A++IE S+  G   L+L+ KLMD IEWLP SIGKL  +  LDLSENRI+A
Sbjct: 182 NSEKLSLMKVAAVIEKSANTGAVVLDLRGKLMDQIEWLPLSIGKLLFITELDLSENRIMA 241

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P+TI GL +L KLD+H+N++I LP S G+L++L  LDLR N++ +LP +  +L +LE L
Sbjct: 242 LPSTINGLKALTKLDVHSNQLINLPGSFGELINLTDLDLRANRLRSLPASFVKLTKLENL 301

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DL SN  + LP+++GSL SLK L V+TN+LEE+P+TIG C+SL ELR+D+N L+ALPEA+
Sbjct: 302 DLSSNQFTQLPETVGSLTSLKILNVDTNELEEVPYTIGSCTSLVELRLDFNELRALPEAI 361

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE+L++ YN I+ LPTTM  LS+LRELDVSFNELES+PE+LCFA  L K+N+ NN
Sbjct: 362 GKLDCLEILALHYNRIRGLPTTMGHLSNLRELDVSFNELESIPENLCFAENLKKLNVANN 421

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           FADLR+ PR+IGNLE+LEELDIS++QIRVLPDSFR+LS+LRV R  E PLE+PPR +  +
Sbjct: 422 FADLRSSPRNIGNLELLEELDISDDQIRVLPDSFRLLSKLRVFRADETPLEIPPRQVTIL 481

Query: 371 GAQAVVQYMADLVEKRDAKTQ 391
           GAQAVVQ+MADLV KRDA TQ
Sbjct: 482 GAQAVVQFMADLVNKRDANTQ 502


>gi|297742120|emb|CBI33907.3| unnamed protein product [Vitis vinifera]
          Length = 513

 Score =  410 bits (1053), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/342 (60%), Positives = 270/342 (78%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           D EK +L+K+A+LIE ++K     L+LQ KLM+ IEWLP SIGKLS +  L+LSENRI+A
Sbjct: 160 DTEKFNLMKVAALIEKTAKIKAGVLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMA 219

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P+T+ GL +L KLD+H+N++I LPDSIG+L++L  LDL  N++ +LP +   LV L  L
Sbjct: 220 LPSTMSGLRALTKLDVHSNQLINLPDSIGELVNLADLDLHANRLRSLPASFGNLVNLINL 279

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           +L SN  + LPD+IGSL SLK+L V+TN+LEE+P+TIG C+SL ELR+D+N+L+ALPEAV
Sbjct: 280 NLSSNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDFNQLRALPEAV 339

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE+L++ YN IK LPTT+ +LS+LRELDVSFNELESVPE+LCFA  L K+N+G N
Sbjct: 340 GKLECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFAVKLKKLNVGKN 399

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           FADLRALPRSIGNLEMLEELDIS+ QIR+LPDSFR LS+LRVLR  E PLEVPPR + ++
Sbjct: 400 FADLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETPLEVPPREVTKL 459

Query: 371 GAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRK 412
           GAQ VVQYMADL  K +A+    K+K  W  +C   R+  ++
Sbjct: 460 GAQEVVQYMADLTAKWEARPLSSKKKGFWFWVCSIFRARTKR 501


>gi|225427252|ref|XP_002278650.1| PREDICTED: leucine-rich repeat protein soc-2 [Vitis vinifera]
          Length = 533

 Score =  409 bits (1052), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 208/342 (60%), Positives = 270/342 (78%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           D EK +L+K+A+LIE ++K     L+LQ KLM+ IEWLP SIGKLS +  L+LSENRI+A
Sbjct: 180 DTEKFNLMKVAALIEKTAKIKAGVLDLQGKLMEKIEWLPTSIGKLSDITELNLSENRIMA 239

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P+T+ GL +L KLD+H+N++I LPDSIG+L++L  LDL  N++ +LP +   LV L  L
Sbjct: 240 LPSTMSGLRALTKLDVHSNQLINLPDSIGELVNLADLDLHANRLRSLPASFGNLVNLINL 299

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           +L SN  + LPD+IGSL SLK+L V+TN+LEE+P+TIG C+SL ELR+D+N+L+ALPEAV
Sbjct: 300 NLSSNQFTHLPDNIGSLTSLKRLNVDTNELEEVPYTIGSCTSLLELRLDFNQLRALPEAV 359

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE+L++ YN IK LPTT+ +LS+LRELDVSFNELESVPE+LCFA  L K+N+G N
Sbjct: 360 GKLECLEILTLHYNRIKGLPTTIGNLSNLRELDVSFNELESVPENLCFAVKLKKLNVGKN 419

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           FADLRALPRSIGNLEMLEELDIS+ QIR+LPDSFR LS+LRVLR  E PLEVPPR + ++
Sbjct: 420 FADLRALPRSIGNLEMLEELDISDCQIRMLPDSFRFLSKLRVLRADETPLEVPPREVTKL 479

Query: 371 GAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRK 412
           GAQ VVQYMADL  K +A+    K+K  W  +C   R+  ++
Sbjct: 480 GAQEVVQYMADLTAKWEARPLSSKKKGFWFWVCSIFRARTKR 521


>gi|226531494|ref|NP_001147848.1| LOC100281458 [Zea mays]
 gi|195614118|gb|ACG28889.1| protein lap4 [Zea mays]
          Length = 532

 Score =  407 bits (1047), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/335 (58%), Positives = 258/335 (77%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
              G D EKL LI++ASLIE S+KKGT +LNL+ KL+D +EWLP S+GKL  +  LDLSE
Sbjct: 179 TSAGTDTEKLGLIQVASLIESSAKKGTTELNLRGKLVDQVEWLPVSLGKLQDVTELDLSE 238

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRI+A+P+TIG L  L KLDLH+N++I LPD+ G+L SL+ LDLR NQ+ +LP +   L+
Sbjct: 239 NRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLI 298

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L  LDL SN L  LPD +G L +L++LI ETN++EELP+TIG C+SL ELR+D+N+LKA
Sbjct: 299 SLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEIEELPYTIGSCTSLVELRLDFNQLKA 358

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEA+GK+  LE+L++ YN IK LPTT+  L+ LRELDVSFNE+E++PE++CFA +LVK+
Sbjct: 359 LPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKL 418

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+  NFADLRALP+SIG LEMLEELDIS+NQIRVLPDSF  LS+LRV    E PLEVPP+
Sbjct: 419 NVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPK 478

Query: 366 NIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
            +V++GAQ +V YM ++   R+   +   ++  W 
Sbjct: 479 EVVKLGAQELVNYMKNMAAAREVSRKETDERSFWT 513


>gi|242040121|ref|XP_002467455.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
 gi|241921309|gb|EER94453.1| hypothetical protein SORBIDRAFT_01g028430 [Sorghum bicolor]
          Length = 538

 Score =  407 bits (1045), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 196/335 (58%), Positives = 256/335 (76%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
              G D EKL LI++ASLIE S++KGT +LNL+ KL+D +EWLP S+GKL  +  LDLSE
Sbjct: 184 ASAGTDTEKLGLIQVASLIESSARKGTTELNLRGKLVDQVEWLPVSLGKLQDVTELDLSE 243

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRI+A+P+TIG L  L KLDLH+N++I LPD+ G+L  L+ LDLR NQ+ +LP +   L 
Sbjct: 244 NRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSCLIDLDLRANQLKSLPTSFGNLT 303

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L  LDL SN L  LPD +G L +L++LI ETN+LEELP+TIG C+SL ELR+D+N+LKA
Sbjct: 304 SLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNELEELPYTIGSCTSLVELRLDFNQLKA 363

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEA+GK+  LE+L++ YN IK LPTT+  L+ LRELDVSFNE+E++PE++CFA +LVK+
Sbjct: 364 LPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKL 423

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+  NFADLRALP+SIG LEMLEELDIS+NQIRVLPDSF  LS+LRV    E PLEVPP+
Sbjct: 424 NVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPK 483

Query: 366 NIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
            +V++GAQ +V YM ++V  R+       ++  W 
Sbjct: 484 EVVKLGAQELVNYMKNMVAAREVSQNQTNKRSFWT 518


>gi|224126505|ref|XP_002329571.1| predicted protein [Populus trichocarpa]
 gi|222870280|gb|EEF07411.1| predicted protein [Populus trichocarpa]
          Length = 492

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 203/336 (60%), Positives = 261/336 (77%), Gaps = 4/336 (1%)

Query: 78  IKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +++A++IE S+K G   L+L+ KLMD +EWLP SIGKLS +  LDLSEN+I+A+P+TI  
Sbjct: 157 LQVAAIIENSAKTGAVVLDLRGKLMDKVEWLPLSIGKLSVITELDLSENQIMALPSTINN 216

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L KLD+H+N++I LP+S G+L++L  LDL  N++  LP +  +L  LE LDLGSN  
Sbjct: 217 LKALTKLDVHSNQLINLPESFGELINLTDLDLHANRLRLLPASFGKLTNLENLDLGSNQF 276

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           + LP++IGSL SLKKL VETN+LEELPHTIG C+SL ELR+D+N+L+ALPEA+GK+  LE
Sbjct: 277 TQLPETIGSLTSLKKLNVETNELEELPHTIGSCTSLVELRLDFNQLRALPEAIGKLACLE 336

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           +L++ YN I+ LPTTM  LS+LREL VSFNELE +PE+LCFA  L K+N+ NNFADLRAL
Sbjct: 337 ILTLHYNRIRGLPTTMGHLSNLRELVVSFNELEFIPENLCFAENLRKLNVANNFADLRAL 396

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           PR+IGNLE+LEELDIS++QIRVLPDSFR+L +L V R  E PLEVPPR +  +GAQAVVQ
Sbjct: 397 PRNIGNLELLEELDISDDQIRVLPDSFRLLLKLVVFRADETPLEVPPRQVTTLGAQAVVQ 456

Query: 378 YMADLVEKRDAKTQPVKQKKS-WVEMCFF---SRSN 409
           +MA LV KRD   Q  K+KK  W  +C      RSN
Sbjct: 457 FMATLVNKRDTNPQLSKKKKGFWHRVCLIFWPCRSN 492


>gi|356563459|ref|XP_003549980.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 518

 Score =  399 bits (1025), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 205/353 (58%), Positives = 267/353 (75%), Gaps = 4/353 (1%)

Query: 55  RNKVPIMIMCMCCVGQDG--EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSI 112
           R+K    ++       DG  EKLSL+K+A++IE  +  G   L L+ KL+D +EWLP SI
Sbjct: 158 RHKNVFHVVKPSLSAGDGSTEKLSLMKVATVIESCAGSGATILELRGKLVDQMEWLPVSI 217

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
           GKLS +  +DLSENR++A+P TI GL +L KLDLH+N++I LP S G+L++LV LDL  N
Sbjct: 218 GKLSDVTEMDLSENRLMALPTTIVGLKALTKLDLHSNQLINLPHSFGELINLVDLDLHAN 277

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           ++ +LP     L  L +LDL SN  + LP++IG+L SLK+L VETN+LEELP+TIG CSS
Sbjct: 278 KLKSLPATFGNLTNLTDLDLSSNGFTDLPETIGNLSSLKRLNVETNELEELPYTIGNCSS 337

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L  L++D N+LKALPEA+GK+  LE+L++ YN +K+LP+TM +L +L+ELDVSFNELE V
Sbjct: 338 LSVLKLDLNQLKALPEAIGKLECLEILTLHYNRVKRLPSTMDNLCNLKELDVSFNELEFV 397

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           PESLCFAT L K+N+G NFADLRALP SIGNLEMLEELDIS++QI+ LP+SFR LS+LRV
Sbjct: 398 PESLCFATNLKKLNLGKNFADLRALPASIGNLEMLEELDISDDQIKALPESFRFLSKLRV 457

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS--WVEMC 403
            R  E PL++PPR +V++G+Q VVQYMAD V KRDAK  P K+KK   W   C
Sbjct: 458 FRADETPLDLPPRELVKLGSQEVVQYMADFVTKRDAKLVPSKKKKKGFWFWFC 510


>gi|357476677|ref|XP_003608624.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355509679|gb|AES90821.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 493

 Score =  398 bits (1022), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 198/320 (61%), Positives = 253/320 (79%), Gaps = 2/320 (0%)

Query: 71  DG--EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           DG  EKLSL+K+A++IE  +      L L+ KL+D +EWLP SIGKLS +  +DLSENRI
Sbjct: 149 DGSIEKLSLMKVATVIENCANNKDTVLELRGKLVDQMEWLPLSIGKLSDVTQIDLSENRI 208

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P TI GL +L KLDLH+N++I LP+S G+L++L+ LDL  N++ +LP    +L  L 
Sbjct: 209 MALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLI 268

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           +LDL +N+ + L +SIGSLISLK+L VETN LEELP TIG C+SL  +++D+N LKALPE
Sbjct: 269 DLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPE 328

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           A+GK+  LE+L+V YN IK LPTT+ +LS+L+ELDVSFNELE VPE+ CFA +L K+N+G
Sbjct: 329 AIGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCFAVSLKKLNLG 388

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            NFADLRALPRSIGNLEMLEELDIS +QI+ LPDSFR LS+LRV R  E PLEVPP+ +V
Sbjct: 389 KNFADLRALPRSIGNLEMLEELDISGDQIKALPDSFRFLSKLRVFRADETPLEVPPKEVV 448

Query: 369 EMGAQAVVQYMADLVEKRDA 388
           ++GAQ VVQYMAD V KRDA
Sbjct: 449 KLGAQEVVQYMADYVYKRDA 468


>gi|255557615|ref|XP_002519837.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223540883|gb|EEF42441.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 528

 Score =  397 bits (1019), Expect = e-108,   Method: Compositional matrix adjust.
 Identities = 203/332 (61%), Positives = 256/332 (77%), Gaps = 1/332 (0%)

Query: 73  EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVP 132
           EK SL+K+A++IE S+K     L+L+ KLMD IEWLP SIGKLS +  LDLSENRI+A+P
Sbjct: 186 EKFSLMKVAAIIENSAKTEDVVLDLKGKLMDQIEWLPLSIGKLSFITELDLSENRIMALP 245

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
            TI  L  L KLD+H+N++I LPDS G+L++L  LD+R N++ +LP +   L  L  LDL
Sbjct: 246 TTITSLKVLTKLDIHSNQLINLPDSFGELMNLTDLDVRANRLKSLPSSFGNLKNLLNLDL 305

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            SN  + LP+++G L SLK L VE N+LEE+P+TI  CSSL ELR+D+NRL+ALPEA+GK
Sbjct: 306 SSNQFTHLPEALGDLTSLKILNVEINELEEIPYTIENCSSLVELRLDFNRLRALPEAIGK 365

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  LE+L++ YN I++LPTTM  LS LRELDVSFNELES+PE+LCFA +L K+ +G NFA
Sbjct: 366 LGCLEILTLHYNRIRKLPTTMGDLSYLRELDVSFNELESIPENLCFAASLKKLKVGENFA 425

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           DL  LPRSIGNLEMLEELDIS++QIRVLPDSFR LS+LRV R    PLEVPPR + ++GA
Sbjct: 426 DLTDLPRSIGNLEMLEELDISDDQIRVLPDSFRFLSKLRVFRADGTPLEVPPRQVAKLGA 485

Query: 373 QAVVQYMADLVEKRDAKTQPVKQKKS-WVEMC 403
           QA VQ+MADLV KRD K +P K+KK  W   C
Sbjct: 486 QASVQFMADLVAKRDVKIRPTKKKKGFWHRAC 517


>gi|414867883|tpg|DAA46440.1| TPA: hypothetical protein ZEAMMB73_858342 [Zea mays]
          Length = 450

 Score =  383 bits (984), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 187/300 (62%), Positives = 239/300 (79%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
              G D EKL LI++ASLIE S+KKGT +LNL+ KL+D +EWLP S+GKL  +  LDLSE
Sbjct: 150 TSAGTDTEKLGLIQVASLIESSAKKGTTELNLRGKLVDQVEWLPVSLGKLQDVTELDLSE 209

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           NRI+A+P+TIG L  L KLDLH+N++I LPD+ G+L SL+ LDLR NQ+ +LP +   L+
Sbjct: 210 NRIMALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLM 269

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L  LDL SN L  LPD +G L +L++LI ETN++EELP+TIG C+SL ELR+D+N+LKA
Sbjct: 270 SLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQLKA 329

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPEA+GK+  LE+L++ YN IK LPTT+  L+ LRELDVSFNE+E++PE++CFA +LVK+
Sbjct: 330 LPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKL 389

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+  NFADLRALP+SIG LEMLEELDIS+NQIRVLPDSF  LS+LRV    E PLEVPP+
Sbjct: 390 NVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPK 449



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 124/204 (60%), Gaps = 5/204 (2%)

Query: 167 LDLRG---NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+LRG   +Q+  LPV+L +L  + ELDL  N + +LP +IGSL  L KL + +N L  L
Sbjct: 179 LNLRGKLVDQVEWLPVSLGKLQDVTELDLSENRIMALPSTIGSLRYLTKLDLHSNQLINL 238

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P T G+ SSL +L +  N+LK+LP + G + +L  L +  N +K LP  +  L +LR L 
Sbjct: 239 PDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDCLGKLKNLRRLI 298

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
              NE+E +P ++   T+LV++ +  +F  L+ALP +IG LE LE L +  N+I+ LP +
Sbjct: 299 AETNEVEELPYTIGSCTSLVELRL--DFNQLKALPEAIGKLENLEILTLHYNRIKGLPTT 356

Query: 344 FRMLSRLRVLRVQENPLEVPPRNI 367
              L+RLR L V  N +E  P NI
Sbjct: 357 IGHLTRLRELDVSFNEVETIPENI 380



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/149 (37%), Positives = 84/149 (56%), Gaps = 2/149 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP +IG  +SLV L L  N++ A+P  IG L +L+ L LH NRI  LP +IG L 
Sbjct: 302 NEVEELPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGHLT 361

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDL 220
            L  LD+  N++  +P  +     L +L++  N  +L +LP SIG L  L++L + +N +
Sbjct: 362 RLRELDVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQI 421

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEA 249
             LP + G  S LR    D   L+  P+A
Sbjct: 422 RVLPDSFGHLSKLRVFHADETPLEVPPKA 450


>gi|194700008|gb|ACF84088.1| unknown [Zea mays]
          Length = 238

 Score =  306 bits (784), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 148/237 (62%), Positives = 191/237 (80%)

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P+TIG L  L KLDLH+N++I LPD+ G+L SL+ LDLR NQ+ +LP +   L+ L 
Sbjct: 1   MALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLA 60

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
            LDL SN L  LPD +G L +L++LI ETN++EELP+TIG C+SL ELR+D+N+LKALPE
Sbjct: 61  NLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRLDFNQLKALPE 120

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           A+GK+  LE+L++ YN IK LPTT+  L+ LRELDVSFNE+E++PE++CFA +LVK+N+ 
Sbjct: 121 AIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENICFAASLVKLNVS 180

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            NFADLRALP+SIG LEMLEELDIS+NQIRVLPDSF  LS+LRV    E PLEVPP+
Sbjct: 181 RNFADLRALPKSIGELEMLEELDISSNQIRVLPDSFGHLSKLRVFHADETPLEVPPK 237



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 5/204 (2%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DL+L+    + ++ LP S G L SL +LDLS N +  +P  +G L +L++L    N + E
Sbjct: 38  DLDLR---ANQLKSLPTSFGNLMSLANLDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEE 94

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP +IG   SLV L L  NQ+ ALP A+ +L  LE L L  N +  LP +IG L  L++L
Sbjct: 95  LPYTIGSCTSLVELRLDFNQLKALPEAIGKLENLEILTLHYNRIKGLPTTIGHLTRLREL 154

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYN--RLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            V  N++E +P  I   +SL +L V  N   L+ALP+++G++  LE L +  N I+ LP 
Sbjct: 155 DVSFNEVETIPENICFAASLVKLNVSRNFADLRALPKSIGELEMLEELDISSNQIRVLPD 214

Query: 272 TMSSLSSLRELDVSFNELESVPES 295
           +   LS LR        LE  P++
Sbjct: 215 SFGHLSKLRVFHADETPLEVPPKA 238



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 102/169 (60%), Gaps = 2/169 (1%)

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP +IGSL  L KL + +N L  LP T G+ SSL +L +  N+LK+LP + G + +L  
Sbjct: 2   ALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLAN 61

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N +K LP  +  L +LR L    NE+E +P ++   T+LV++ +  +F  L+ALP
Sbjct: 62  LDLSSNLLKVLPDCLGKLKNLRRLIAETNEVEELPYTIGSCTSLVELRL--DFNQLKALP 119

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +IG LE LE L +  N+I+ LP +   L+RLR L V  N +E  P NI
Sbjct: 120 EAIGKLENLEILTLHYNRIKGLPTTIGHLTRLRELDVSFNEVETIPENI 168



 Score = 38.5 bits (88), Expect = 6.0,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 42/69 (60%)

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           ALP +IG+L  L +LD+ +NQ+  LPD+F  LS L  L ++ N L+  P +   + + A 
Sbjct: 2   ALPSTIGSLRYLTKLDLHSNQLINLPDTFGELSSLIDLDLRANQLKSLPTSFGNLMSLAN 61

Query: 376 VQYMADLVE 384
           +   ++L++
Sbjct: 62  LDLSSNLLK 70


>gi|302762216|ref|XP_002964530.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
 gi|300168259|gb|EFJ34863.1| hypothetical protein SELMODRAFT_142486 [Selaginella moellendorffii]
          Length = 299

 Score =  252 bits (643), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 141/280 (50%), Positives = 182/280 (65%), Gaps = 5/280 (1%)

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
           A   G  SL  +D+     I L DSI  L +L  L+L GN+I  LP ++  L +L  LDL
Sbjct: 5   AAESGAESLVAVDMFVRENILLDDSISQLSNLRVLELSGNRIVKLPDSIGELSQLTVLDL 64

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            SN L++LPD+IG L SLK+L +E N +EELP TIG C SL ELR D+N+LKALPEAVG 
Sbjct: 65  QSNQLTALPDTIGRLTSLKQLNIEKNGIEELPWTIGNCESLEELRADFNQLKALPEAVGY 124

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  L +LSV  N +K LP+TM+ L+SL ELDV FN+LESVPESLCF TTL K++I +NF 
Sbjct: 125 LGNLRILSVHLNCLKSLPSTMAYLTSLAELDVHFNQLESVPESLCFVTTLRKLDISSNFH 184

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            LR LP  IGNL  LEELDIS N I  LPDSF  L  LR LR++ NP  VPP  + + G 
Sbjct: 185 ALRFLPYKIGNLHQLEELDISYNSILELPDSFVQLENLRKLRLEGNPWRVPPLQVTQKGN 244

Query: 373 QAVVQYMADLVEKRDAKTQPVKQK----KSWVEMC-FFSR 407
           QA+  Y+ + ++++  +    K++    K+    C FF R
Sbjct: 245 QAIFDYLHESIKQKQQEKLARKKRNILIKAAHACCGFFGR 284


>gi|345289739|gb|AEN81361.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289741|gb|AEN81362.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289743|gb|AEN81363.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289745|gb|AEN81364.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289747|gb|AEN81365.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289749|gb|AEN81366.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289751|gb|AEN81367.1| AT2G17440-like protein, partial [Capsella rubella]
 gi|345289753|gb|AEN81368.1| AT2G17440-like protein, partial [Capsella rubella]
          Length = 164

 Score =  248 bits (633), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 122/163 (74%), Positives = 147/163 (90%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP+SIGDL+ LV L+L GNQ+S+LP A SRL+ LEELDL SN+LS+LP+
Sbjct: 2   KLDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 61

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EE+PH I  CSSL+ELR DYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 62  SIGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEILTVR 121

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC A TLVK+
Sbjct: 122 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVKL 164



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 97/154 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+SIG L  LV+L+LS N++ ++P     L  L++LDL +N +  LP+SIG L+
Sbjct: 8   NRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLV 67

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+  N I  +P  +S    L+EL    N L +LP+++G L +L+ L V  N++ +
Sbjct: 68  SLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQ 127

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LP T+   ++L+EL V +N L+++PE++    TL
Sbjct: 128 LPTTMSSMANLKELDVSFNELESVPESLCHAKTL 161



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 78/134 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP +  +L  L  LDLS N +  +P +IG L SLKKLD+  N I E+P +I    
Sbjct: 31  NQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLVSLKKLDVETNNIEEIPHNISGCS 90

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L    N++ ALP A+ +L  LE L +  NN+  LP ++ S+ +LK+L V  N+LE 
Sbjct: 91  SLKELRADYNRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELES 150

Query: 223 LPHTIGQCSSLREL 236
           +P ++    +L +L
Sbjct: 151 VPESLCHAKTLVKL 164



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 60/114 (52%), Gaps = 2/114 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I QLP ++  L  L  L++S N+L S+P +      L ++++ +N   L  LP
Sbjct: 3   LDLHSNRIGQLPESIGDLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTLP 60

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            SIG+L  L++LD+  N I  +P +    S L+ LR   N L+  P  + ++  
Sbjct: 61  ESIGSLVSLKKLDVETNNIEEIPHNISGCSSLKELRADYNRLKALPEAVGKLST 114



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +PES+     LV +N+  N   L +LP +   L  LEELD+S+N +  L
Sbjct: 2   KLDLHSNRIGQLPESIGDLVYLVNLNLSGN--QLSSLPPAFSRLIHLEELDLSSNSLSTL 59

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           P+S   L  L+ L V+ N +E  P NI   G  ++ +  AD
Sbjct: 60  PESIGSLVSLKKLDVETNNIEEIPHNI--SGCSSLKELRAD 98


>gi|295828952|gb|ADG38145.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 120/162 (74%), Positives = 146/162 (90%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP+SIGBL+ LV L+L GNQ+S+LP A SRL+ LEELDL SN+LS+LP+
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EEJPH I  CSSL+ELR BYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 61  SIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVR 120

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC A TLVK
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 97/154 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+SIG L  LV+L+LS N++ ++P     L  L++LDL +N +  LP+SIG L+
Sbjct: 7   NRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLV 66

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+  N I  JP  +S    L+EL    N L +LP+++G L +L+ L V  N++ +
Sbjct: 67  SLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQ 126

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LP T+   ++L+EL V +N L+++PE++    TL
Sbjct: 127 LPTTMSSMANLKELDVSFNELESVPESLCHAKTL 160



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I QLP ++  L  L  L++S N+L S+P +      L ++++ +N   L  LP
Sbjct: 2   LDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTLP 59

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            SIG+L  L++LD+  N I  JP      S L+ LR   N L+  P  + ++  
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLST 113



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +PES+     LV +N+  N   L +LP +   L  LEELD+S+N +  L
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGN--QLSSLPPAFSRLIHLEELDLSSNSLSTL 58

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           P+S   L  L+ L V+ N +E  P  I   G  ++ +  AB
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEJPHXI--SGCSSLKELRAB 97



 Score = 41.6 bits (96), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+++GKLS+L  L +  N I  +P T+  +++LK+LD+  N +  +P+S+    
Sbjct: 99  NRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAK 158

Query: 163 SLV 165
           +LV
Sbjct: 159 TLV 161


>gi|295828950|gb|ADG38144.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 120/162 (74%), Positives = 145/162 (89%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP+SIGBL+ LV L+L GNQ+S LP A SRL+ LEELDL SN+LS+LP+
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EEJPH I  CSSL+ELR BYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 61  SIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVR 120

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC A TLVK
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 96/154 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+SIG L  LV+L+LS N++  +P     L  L++LDL +N +  LP+SIG L+
Sbjct: 7   NRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPESIGSLV 66

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+  N I  JP  +S    L+EL    N L +LP+++G L +L+ L V  N++ +
Sbjct: 67  SLKKLDVETNNIEEJPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQ 126

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LP T+   ++L+EL V +N L+++PE++    TL
Sbjct: 127 LPTTMSSMANLKELDVSFNELESVPESLCHAKTL 160



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 62/138 (44%), Gaps = 25/138 (18%)

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           +L +  NR+  LPE++G +  L  L++  N +  LP   S L  L ELD+S N L ++PE
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGNQLSXLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
                                    SIG+L  L++LD+  N I  JP      S L+ LR
Sbjct: 61  -------------------------SIGSLVSLKKLDVETNNIEEJPHXISGCSSLKELR 95

Query: 355 VQENPLEVPPRNIVEMGA 372
              N L+  P  + ++  
Sbjct: 96  ABYNRLKALPEAVGKLST 113



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 53/101 (52%), Gaps = 4/101 (3%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +PES+     LV +N+  N   L  LP +   L  LEELD+S+N +  L
Sbjct: 1   KLDLHSNRIGQLPESIGBLVYLVNLNLSGN--QLSXLPPAFSRLIHLEELDLSSNSLSTL 58

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           P+S   L  L+ L V+ N +E  P  I   G  ++ +  AB
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEJPHXI--SGCSSLKELRAB 97



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+++GKLS+L  L +  N I  +P T+  +++LK+LD+  N +  +P+S+    
Sbjct: 99  NRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAK 158

Query: 163 SLV 165
           +LV
Sbjct: 159 TLV 161


>gi|295828956|gb|ADG38147.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 120/162 (74%), Positives = 145/162 (89%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP+SIG L+ LV L+L GNQ+S+LP A SRL+ LEELDL SN+LS+LP+
Sbjct: 1   KLDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPE 60

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EE+PH I  CSSL+ELR BYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 61  SIGSLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVR 120

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC A TLVK
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 97/154 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+SIG L  LV+L+LS N++ ++P     L  L++LDL +N +  LP+SIG L+
Sbjct: 7   NRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSNSLSTLPESIGSLV 66

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+  N I  +P  +S    L+EL    N L +LP+++G L +L+ L V  N++ +
Sbjct: 67  SLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQ 126

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LP T+   ++L+EL V +N L+++PE++    TL
Sbjct: 127 LPTTMSSMANLKELDVSFNELESVPESLCHAKTL 160



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 59/114 (51%), Gaps = 2/114 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I QLP ++  L  L  L++S N+L S+P +      L ++++ +N   L  LP
Sbjct: 2   LDLHSNRIGQLPESIGXLVYLVNLNLSGNQLSSLPPAFSRLIHLEELDLSSN--SLSTLP 59

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            SIG+L  L++LD+  N I  +P      S L+ LR   N L+  P  + ++  
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEIPHXISGCSSLKELRABYNRLKALPEAVGKLST 113



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 54/101 (53%), Gaps = 4/101 (3%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +PES+     LV +N+  N   L +LP +   L  LEELD+S+N +  L
Sbjct: 1   KLDLHSNRIGQLPESIGXLVYLVNLNLSGN--QLSSLPPAFSRLIHLEELDLSSNSLSTL 58

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           P+S   L  L+ L V+ N +E  P  I   G  ++ +  AB
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEIPHXI--SGCSSLKELRAB 97



 Score = 41.6 bits (96), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+++GKLS+L  L +  N I  +P T+  +++LK+LD+  N +  +P+S+    
Sbjct: 99  NRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAK 158

Query: 163 SLV 165
           +LV
Sbjct: 159 TLV 161


>gi|295828954|gb|ADG38146.1| AT2G17440-like protein [Capsella grandiflora]
          Length = 162

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 119/162 (73%), Positives = 144/162 (88%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP SIGBL+ LV L+L GNQ+S+LP   SRL+ LEELDL SN+LS+LP+
Sbjct: 1   KLDLHSNRIGQLPXSIGBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSNSLSTLPE 60

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EEJPH I  CSSL+ELR BYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 61  SIGSLVSLKKLDVETNNIEEJPHXISXCSSLKELRABYNRLKALPEAVGKLSTLEILTVR 120

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC A TLVK
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAKTLVK 162



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 96/154 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP SIG L  LV+L+LS N++ ++P     L  L++LDL +N +  LP+SIG L+
Sbjct: 7   NRIGQLPXSIGBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSNSLSTLPESIGSLV 66

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+  N I  JP  +S    L+EL    N L +LP+++G L +L+ L V  N++ +
Sbjct: 67  SLKKLDVETNNIEEJPHXISXCSSLKELRABYNRLKALPEAVGKLSTLEILTVRYNNIRQ 126

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LP T+   ++L+EL V +N L+++PE++    TL
Sbjct: 127 LPTTMSSMANLKELDVSFNELESVPESLCHAKTL 160



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 2/114 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I QLP ++  L  L  L++S N+L S+P        L ++++ +N   L  LP
Sbjct: 2   LDLHSNRIGQLPXSIGBLVYLVNLNLSGNQLSSLPPXFSRLIHLEELDLSSN--SLSTLP 59

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            SIG+L  L++LD+  N I  JP      S L+ LR   N L+  P  + ++  
Sbjct: 60  ESIGSLVSLKKLDVETNNIEEJPHXISXCSSLKELRABYNRLKALPEAVGKLST 113



 Score = 45.4 bits (106), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 2/87 (2%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +P S+     LV +N+  N   L +LP     L  LEELD+S+N +  L
Sbjct: 1   KLDLHSNRIGQLPXSIGBLVYLVNLNLSGN--QLSSLPPXFSRLIHLEELDLSSNSLSTL 58

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P+S   L  L+ L V+ N +E  P  I
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEJPHXI 85



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 21/63 (33%), Positives = 41/63 (65%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+++GKLS+L  L +  N I  +P T+  +++LK+LD+  N +  +P+S+    
Sbjct: 99  NRLKALPEAVGKLSTLEILTVRYNNIRQLPTTMSSMANLKELDVSFNELESVPESLCHAK 158

Query: 163 SLV 165
           +LV
Sbjct: 159 TLV 161


>gi|295828958|gb|ADG38148.1| AT2G17440-like protein [Neslia paniculata]
          Length = 162

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 122/162 (75%), Positives = 148/162 (91%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KLDLH+NRI +LP+SIGDLL+LV L+L GNQ+S+LP A SRL+ LEELDL SN+LS+LP+
Sbjct: 1   KLDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSAFSRLIHLEELDLSSNSLSTLPE 60

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIGSL+SLKKL VETN++EE+PH+I  CSSL+EL  DYNRLKALPEAVGK+ TLE+L+VR
Sbjct: 61  SIGSLVSLKKLDVETNNIEEIPHSISGCSSLKELCADYNRLKALPEAVGKLSTLEILNVR 120

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           YNNI+QLPTTMSS+++L+ELDVSFNELESVPESLC+A TLVK
Sbjct: 121 YNNIRQLPTTMSSMANLKELDVSFNELESVPESLCYAKTLVK 162



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 99/152 (65%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP+SIG L +LV+L+LS N++ ++P+    L  L++LDL +N +  LP+SIG L+SL
Sbjct: 9   IGQLPESIGDLLNLVNLNLSGNQLSSLPSAFSRLIHLEELDLSSNSLSTLPESIGSLVSL 68

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LD+  N I  +P ++S    L+EL    N L +LP+++G L +L+ L V  N++ +LP
Sbjct: 69  KKLDVETNNIEEIPHSISGCSSLKELCADYNRLKALPEAVGKLSTLEILNVRYNNIRQLP 128

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            T+   ++L+EL V +N L+++PE++    TL
Sbjct: 129 TTMSSMANLKELDVSFNELESVPESLCYAKTL 160



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 75/137 (54%), Gaps = 2/137 (1%)

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           +L +  NR+  LPE++G +  L  L++  N +  LP+  S L  L ELD+S N L ++PE
Sbjct: 1   KLDLHSNRIGQLPESIGDLLNLVNLNLSGNQLSSLPSAFSRLIHLEELDLSSNSLSTLPE 60

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           S+    +L K+++  N  ++  +P SI     L+EL    N+++ LP++   LS L +L 
Sbjct: 61  SIGSLVSLKKLDVETN--NIEEIPHSISGCSSLKELCADYNRLKALPEAVGKLSTLEILN 118

Query: 355 VQENPLEVPPRNIVEMG 371
           V+ N +   P  +  M 
Sbjct: 119 VRYNNIRQLPTTMSSMA 135



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 4/101 (3%)

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  N +  +PES+     LV +N+  N   L +LP +   L  LEELD+S+N +  L
Sbjct: 1   KLDLHSNRIGQLPESIGDLLNLVNLNLSGN--QLSSLPSAFSRLIHLEELDLSSNSLSTL 58

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           P+S   L  L+ L V+ N +E  P +I   G  ++ +  AD
Sbjct: 59  PESIGSLVSLKKLDVETNNIEEIPHSI--SGCSSLKELCAD 97


>gi|302822956|ref|XP_002993133.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
 gi|300139024|gb|EFJ05773.1| hypothetical protein SELMODRAFT_136615 [Selaginella moellendorffii]
          Length = 245

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 128/223 (57%), Positives = 156/223 (69%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           I L DSI  L +L  L+L GN+I  LP ++  L +L  LDL SN L++LPD+IG L SLK
Sbjct: 7   ILLDDSISQLSNLRVLELSGNRIVKLPDSIGELSQLTVLDLQSNQLTALPDTIGRLTSLK 66

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +E N +EELP TIG C SL ELR D+N+LKALPEAVG +  L +LSV  N +K LP+
Sbjct: 67  RLNIEKNGIEELPWTIGNCESLEELRADFNQLKALPEAVGYLGNLRILSVHLNCLKSLPS 126

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           TM+ L+SL ELDV FN+LESVPESLCF TTL K++I +NF  LR LP  IGNL  LEELD
Sbjct: 127 TMAYLTSLAELDVHFNQLESVPESLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELD 186

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
           IS N I  LPDSF  L  LR LR++ NP  VPP  + + G Q 
Sbjct: 187 ISYNSILELPDSFVQLENLRKLRLEGNPWRVPPLQVTQKGNQV 229



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 86/152 (56%), Gaps = 2/152 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP +IG   SL  L    N++ A+P  +G L +L+ L +H N +  LP ++  L 
Sbjct: 73  NGIEELPWTIGNCESLEELRADFNQLKALPEAVGYLGNLRILSVHLNCLKSLPSTMAYLT 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDL 220
           SL  LD+  NQ+ ++P +L  +  L +LD+ SN   L  LP  IG+L  L++L +  N +
Sbjct: 133 SLAELDVHFNQLESVPESLCFVTTLRKLDISSNFHALRFLPYKIGNLHQLEELDISYNSI 192

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            ELP +  Q  +LR+LR++ N  +  P  V +
Sbjct: 193 LELPDSFVQLENLRKLRLEGNPWRVPPLQVTQ 224


>gi|297608834|ref|NP_001062214.2| Os08g0511700 [Oryza sativa Japonica Group]
 gi|255678573|dbj|BAF24128.2| Os08g0511700, partial [Oryza sativa Japonica Group]
          Length = 140

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/136 (72%), Positives = 119/136 (87%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N LKALPEAVGK+  LE+LSVRYNN++ LPTTM+SL+ L+E+DVSFNELES+PE+ CFAT
Sbjct: 1   NHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFAT 60

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +L+K+N+GNNFADL+ LPRSIGNLEMLEELD+SNNQIRVLPDSF  L  LRVLR +ENPL
Sbjct: 61  SLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPL 120

Query: 361 EVPPRNIVEMGAQAVV 376
           +VPPR+I   GAQ  +
Sbjct: 121 QVPPRDIALKGAQVFL 136



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 2/128 (1%)

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N +  LP+++G L  L  L +R N + +LP  ++ L +L+E+D+  N L S+P++     
Sbjct: 1   NHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFAT 60

Query: 209 SLKKLIVETN--DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           SL KL V  N  DL+ LP +IG    L EL +  N+++ LP++ G +  L VL    N +
Sbjct: 61  SLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPL 120

Query: 267 KQLPTTMS 274
           +  P  ++
Sbjct: 121 QVPPRDIA 128



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 2/134 (1%)

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N + ALP A+ +L  LE L +  NNL SLP ++ SL  LK++ V  N+LE +P      +
Sbjct: 1   NHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFAT 60

Query: 232 SLRELRV--DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
           SL +L V  ++  L+ LP ++G +  LE L +  N I+ LP +  +L  LR L    N L
Sbjct: 61  SLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPL 120

Query: 290 ESVPESLCFATTLV 303
           +  P  +      V
Sbjct: 121 QVPPRDIALKGAQV 134



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 2/128 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP+++GKL  L  L +  N + ++P T+  L+ LK++D+  N +  +P++     
Sbjct: 1   NHLKALPEAVGKLEPLEILSVRYNNLRSLPTTMASLTKLKEVDVSFNELESIPENFCFAT 60

Query: 163 SLVYLDLRGN--QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           SL+ L++  N   +  LP ++  L  LEELD+ +N +  LPDS G+L  L+ L  E N L
Sbjct: 61  SLIKLNVGNNFADLQYLPRSIGNLEMLEELDMSNNQIRVLPDSFGNLKHLRVLRAEENPL 120

Query: 221 EELPHTIG 228
           +  P  I 
Sbjct: 121 QVPPRDIA 128


>gi|118482742|gb|ABK93289.1| unknown [Populus trichocarpa]
          Length = 117

 Score =  208 bits (530), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 96/117 (82%), Positives = 108/117 (92%)

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           MNIGNNFAD+++LPRSIGNLE LEELDISNNQIRVLP SFRML+RLR+LRV+E PLEVPP
Sbjct: 1   MNIGNNFADMQSLPRSIGNLENLEELDISNNQIRVLPGSFRMLTRLRILRVEETPLEVPP 60

Query: 365 RNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGMDYVKA 421
           R++ E GAQAVVQYMA+LVEKRD K QPVKQKKSW ++CFFS+SNKRKRNGMDYVK 
Sbjct: 61  RHVAEKGAQAVVQYMAELVEKRDIKAQPVKQKKSWAQICFFSKSNKRKRNGMDYVKT 117


>gi|388507012|gb|AFK41572.1| unknown [Medicago truncatula]
          Length = 174

 Score =  206 bits (523), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 99/170 (58%), Positives = 134/170 (78%)

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           +A+P TI GL +L KLDLH+N++I LP+S G+L++L+ LDL  N++ +LP    +L  L 
Sbjct: 1   MALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLI 60

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           +LDL +N+ + L +SIGSLISLK+L VETN LEELP TIG C+SL  +++D+N LKALPE
Sbjct: 61  DLDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPE 120

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           A+GK+  LE+L+V YN IK LPTT+ +LS+L+ELDVSFNELE VPE+ CF
Sbjct: 121 AIGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCF 170



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/173 (38%), Positives = 102/173 (58%), Gaps = 2/173 (1%)

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP +I  L +L KL + +N L  LP++ G+  +L EL +  N+LK+LP+  GK+  L  
Sbjct: 2   ALPTTIVGLKALTKLDLHSNQLINLPNSFGELINLIELDLHANKLKSLPDTFGKLTNLID 61

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N+   L  ++ SL SL+ L+V  N+LE +P ++   T+L  M +  +F +L+ALP
Sbjct: 62  LDLSTNDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKL--DFNELKALP 119

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
            +IG LE LE L +  N+I++LP +   LS L+ L V  N LE  P N    G
Sbjct: 120 EAIGKLECLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENFCFRG 172



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 57/141 (40%), Positives = 86/141 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S G+L +L+ LDL  N++ ++P T G L++L  LDL  N    L +SIG L+SL  L
Sbjct: 26  LPNSFGELINLIELDLHANKLKSLPDTFGKLTNLIDLDLSTNDFTHLHESIGSLISLKRL 85

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  N++  LP  +     L  + L  N L +LP++IG L  L+ L V  N ++ LP TI
Sbjct: 86  NVETNKLEELPFTIGNCTSLTVMKLDFNELKALPEAIGKLECLEILTVHYNRIKMLPTTI 145

Query: 228 GQCSSLRELRVDYNRLKALPE 248
           G  S+L+EL V +N L+ +PE
Sbjct: 146 GNLSNLKELDVSFNELEFVPE 166



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 57/102 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++   L +SIG L SL  L++  N++  +P TIG  +SL  + L  N +  LP++IG L 
Sbjct: 67  NDFTHLHESIGSLISLKRLNVETNKLEELPFTIGNCTSLTVMKLDFNELKALPEAIGKLE 126

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  L +  N+I  LP  +  L  L+ELD+  N L  +P++ 
Sbjct: 127 CLEILTVHYNRIKMLPTTIGNLSNLKELDVSFNELEFVPENF 168


>gi|297818186|ref|XP_002876976.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322814|gb|EFH53235.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 471

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/262 (40%), Positives = 164/262 (62%), Gaps = 5/262 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++++DL    +  LP++   ++ LVYL+L GN ++ +P A+S+L +LEELD+ SN+L SL
Sbjct: 162 VERIDLSGQELKLLPEAFWKVVGLVYLNLSGNDLTVIPEAISKLKKLEELDVSSNSLESL 221

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L++L+ L V  N+L  LP +I  C SL EL   YN L  LP  +G  +  LE L
Sbjct: 222 PDSIGMLLNLRILNVNGNNLTALPESIAHCRSLVELDASYNNLTTLPTNIGYGLQNLERL 281

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S++ N ++  P ++S + +L+ LD   NE+  +P S+   T L  +N+ +NF +L  +P 
Sbjct: 282 SIQLNKLRYFPGSISEMYNLKYLDAHMNEIHGIPNSIGRLTKLEVLNLSSNFNNLMGVPD 341

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +I +L  L ELD+SNNQI+ +PDSF  L +L  L + ENPLE+P + +   GA+AV ++M
Sbjct: 342 TITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDENPLEIPSQKVAGQGAEAVREFM 401

Query: 380 ADLVEKRDAKTQPVKQKKSWVE 401
                KR  +    +Q++  VE
Sbjct: 402 ----RKRWGEIMAEQQQRIGVE 419



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 26/168 (15%)

Query: 103 DNIEWLPDSIGKL-----------------------SSLVSLDLSENRIVAVPATIG-GL 138
           +++E LPDSIG L                        SLV LD S N +  +P  IG GL
Sbjct: 216 NSLESLPDSIGMLLNLRILNVNGNNLTALPESIAHCRSLVELDASYNNLTTLPTNIGYGL 275

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS--NN 196
            +L++L +  N++   P SI ++ +L YLD   N+I  +P ++ RL +LE L+L S  NN
Sbjct: 276 QNLERLSIQLNKLRYFPGSISEMYNLKYLDAHMNEIHGIPNSIGRLTKLEVLNLSSNFNN 335

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           L  +PD+I  L +L++L +  N ++ +P +  +   L +L +D N L+
Sbjct: 336 LMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDENPLE 383


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 177/286 (61%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ + K  R LNLQ    + ++ LP+ IGKL +L  LDLS N++ A+P  IG L +L KL
Sbjct: 316 EIGNLKNLRTLNLQ---YNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKL 372

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  LP  IG L +L  L L  NQ+  LP  + +L  L+ LDL  N L +LP  I
Sbjct: 373 DLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEI 432

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N LE LP  IG+  +L+EL + YN+L+ALP+ +GK+  L+ L+++YN
Sbjct: 433 GQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYN 492

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K LP  +  L +L++L++ +N+L+++P+ +     L ++++ NN   L+ LP+ IG L
Sbjct: 493 QLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNN--QLKTLPKEIGKL 550

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL++  N++  LP     L  L++L +  N L+  P+ I ++
Sbjct: 551 QNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKL 596



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/283 (37%), Positives = 177/283 (62%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R+L+L N   + ++ LP  IGKL +L +L+LS N++ A+P  IG L +L+ L
Sbjct: 270 EIGQLQNLRELHLYN---NKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTL 326

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N +  LP+ IG L +L  LDL  N++ ALP  + +L  L +LDL  N L +LP  I
Sbjct: 327 NLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQALPKEI 386

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N LE LP  IG+  +L+ L + +N+L+ALP+ +G++  L++L +RYN
Sbjct: 387 GQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYN 446

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++ LP  +  L +L+EL++ +N+LE++P+ +     L K+N+   +  L+ LP+ IG L
Sbjct: 447 QLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNL--QYNQLKTLPKEIGKL 504

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L++L++  NQ++ LP     L  LR L ++ N L+  P+ I
Sbjct: 505 KNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEI 547



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/268 (39%), Positives = 167/268 (62%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+ IGKL +L  L LS+N++ A+P  IG L +L+ LDL  N++  LP  IG L 
Sbjct: 170 NQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLR 229

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  NQ+  LP  + +L  L+ LDL  N L +LP+ IG L +L++L +  N L+ 
Sbjct: 230 NLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKA 289

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +LR L +  N+L+ALPE +G +  L  L+++YN +K LP  +  L +L EL
Sbjct: 290 LPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPEL 349

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N+LE++P+ +     L K+++ +N   L+ALP+ IG L+ L EL + NNQ+  LP+
Sbjct: 350 DLSHNKLEALPKEIGQLQNLPKLDLSHN--QLQALPKEIGQLQNLRELHLYNNQLETLPE 407

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L++L +  N LE  P+ I ++
Sbjct: 408 EIGKLQNLQILDLSHNKLEALPKEIGQL 435



 Score =  189 bits (479), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 163/268 (60%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +E LP+ IG L +L  LDLS N++ A+P  IG L +L KLDL  N++  LP+ IG
Sbjct: 190 LSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEIG 249

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  LDLR NQ+  LP  + +L  L EL L +N L +LP  IG L +L+ L + TN 
Sbjct: 250 QLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNK 309

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           LE LP  IG   +LR L + YN LK LPE +GK+  L  L + +N ++ LP  +  L +L
Sbjct: 310 LEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNL 369

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD+S N+L+++P+ +     L ++++ NN   L  LP  IG L+ L+ LD+S+N++  
Sbjct: 370 PKLDLSHNQLQALPKEIGQLQNLRELHLYNN--QLETLPEEIGKLQNLQILDLSHNKLEA 427

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP     L  L++L ++ N LE  P+ I
Sbjct: 428 LPKEIGQLQNLQILDLRYNQLEALPKEI 455



 Score =  186 bits (472), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/268 (40%), Positives = 166/268 (61%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +E LP+ IG L +L  LDLS N++  +P  IG L +L++L L  N++  LP+ IG
Sbjct: 144 LSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIG 203

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           +L +L  LDL  N++ ALP  + +L  L +LDL  N L +LP+ IG L +L+ L +  N 
Sbjct: 204 NLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQ 263

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           LE LP  IGQ  +LREL +  N+LKALP+ +GK+  L  L++  N ++ LP  + +L +L
Sbjct: 264 LETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLKNL 323

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R L++ +N L+++PE +     L ++++ +N   L ALP+ IG L+ L +LD+S+NQ++ 
Sbjct: 324 RTLNLQYNPLKTLPEEIGKLQNLPELDLSHN--KLEALPKEIGQLQNLPKLDLSHNQLQA 381

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP     L  LR L +  N LE  P  I
Sbjct: 382 LPKEIGQLQNLRELHLYNNQLETLPEEI 409



 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/287 (38%), Positives = 176/287 (61%), Gaps = 5/287 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R+L+L N   + +E LP+ IGKL +L  LDLS N++ A+P  IG L +L+ L
Sbjct: 385 EIGQLQNLRELHLYN---NQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQIL 441

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  LP  IG L +L  L+LR N++ ALP  + +L  L++L+L  N L +LP  I
Sbjct: 442 DLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEI 501

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+KL ++ N L+ LP  IG+  +LREL +  N+LK LP+ +GK+  L+ L++RYN
Sbjct: 502 GKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYN 561

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++ LP  +  L +L+ L +S N+L+++P+ +     L K+ +  N   L+ALP+ IG L
Sbjct: 562 KLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGN--QLQALPKEIGKL 619

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           + L+ LD+ NN ++ LP     L  L+ L +    LE  P  I ++G
Sbjct: 620 QNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKLG 666



 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 100/265 (37%), Positives = 164/265 (61%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ IG+L +L  L L  N++ A+P  IG L +L+ L+L  N++  LP+ IG+L 
Sbjct: 262 NQLETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNKLEALPEEIGNLK 321

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L+ N +  LP  + +L  L ELDL  N L +LP  IG L +L KL +  N L+ 
Sbjct: 322 NLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQNLPKLDLSHNQLQA 381

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +LREL +  N+L+ LPE +GK+  L++L + +N ++ LP  +  L +L+ L
Sbjct: 382 LPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQIL 441

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+ +N+LE++P+ +     L ++N+   +  L ALP+ IG L+ L++L++  NQ++ LP 
Sbjct: 442 DLRYNQLEALPKEIGKLQNLQELNL--RYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPK 499

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L +Q N L+  P++I
Sbjct: 500 EIGKLKNLQKLNLQYNQLKTLPKDI 524



 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/308 (36%), Positives = 175/308 (56%), Gaps = 7/308 (2%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++ +C+    Q  E ++   L   +   SK    DL+  NKL    + LP  IGKL +L 
Sbjct: 17  LITLCLFSAIQAKEAVTYTDLRKALANPSKVFVLDLS-SNKL----KTLPKEIGKLKNLQ 71

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            LDLS N++ A+P  IG L +L++L L  N++  LP+ IG+L +L  L L  NQ+  LP 
Sbjct: 72  ELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNNQLKTLPE 131

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L+EL L  N L +LP+ IG+L +L+ L +  N L+ LP  IG+  +L+EL + 
Sbjct: 132 EIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNLQELYLS 191

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L+ALPE +G +  L++L +  N ++ LP  +  L +L +LD+S N+LE++PE +   
Sbjct: 192 DNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLPEEIGQL 251

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  +++   +  L  LP  IG L+ L EL + NN+++ LP     L  LR L +  N 
Sbjct: 252 QNLQILDL--RYNQLETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLSTNK 309

Query: 360 LEVPPRNI 367
           LE  P  I
Sbjct: 310 LEALPEEI 317



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 112/195 (57%), Gaps = 3/195 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNLQ    + ++ LP  IGKL +L  L+L  N++  +P  IG L +L++L
Sbjct: 477 EIGKLKNLQKLNLQ---YNQLKTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLREL 533

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  LP  IG L +L  L+LR N++  LP  + +L  L+ L L  N L +LP  I
Sbjct: 534 DLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEI 593

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L++L+KL +  N L+ LP  IG+  +L+ L +  N LK LP+ +GK+ +L+ L +   
Sbjct: 594 EKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNK 653

Query: 265 NIKQLPTTMSSLSSL 279
            ++ LP  +  L  L
Sbjct: 654 QLESLPIEIGKLGEL 668


>gi|356513766|ref|XP_003525581.1| PREDICTED: uncharacterized protein LOC100782818 [Glycine max]
          Length = 511

 Score =  193 bits (491), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/280 (41%), Positives = 168/280 (60%), Gaps = 8/280 (2%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++++DL   R+  LP + G + +LV LD+  NQ+S +P ++S L  LEEL+L SN L S
Sbjct: 211 GIERVDLSGKRLKLLPPAFGHIPALVVLDVSTNQLSVIPDSISGLANLEELNLSSNALES 270

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LPDSIG L  LK L V  N L  LP +I QC SL EL   +N L  LP  +G ++  L+ 
Sbjct: 271 LPDSIGLLQKLKFLNVSGNKLSALPDSISQCRSLVELDAGFNSLTYLPTNIGYELLNLQK 330

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L ++ N I+ LP+++  + SLR LD  FNEL  +P ++   T L  +N+ +NF+DLR LP
Sbjct: 331 LMIQLNKIRSLPSSVCEMKSLRYLDAHFNELRGLPIAIGKLTNLEVLNLSSNFSDLRELP 390

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            + G+L  L ELD+SNNQI  LPD+F  L  L  L + +NP+EVPP  IV  G QAV  +
Sbjct: 391 ETFGDLISLRELDLSNNQIHALPDTFGRLDSLTKLNLDQNPVEVPPMEIVNQGVQAVKSF 450

Query: 379 MA----DLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRN 414
           M     D++ + + K+  V Q+    E  + +RS    +N
Sbjct: 451 MVQRWIDILAEEERKSTQVLQEG---ENDWLTRSTSWLKN 487



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP +IGKL++L  L+LS N   +  +P T G L SL++LDL  N+I  LPD+ G L SL 
Sbjct: 364 LPIAIGKLTNLEVLNLSSNFSDLRELPETFGDLISLRELDLSNNQIHALPDTFGRLDSLT 423

Query: 166 YLDLRGNQISALPVAL 181
            L+L  N +   P+ +
Sbjct: 424 KLNLDQNPVEVPPMEI 439



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 29/61 (47%), Positives = 38/61 (62%), Gaps = 2/61 (3%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL +   D +  LP++ G L SL  LDLS N+I A+P T G L SL KL+L  N  +E+
Sbjct: 377 LNLSSNFSD-LRELPETFGDLISLRELDLSNNQIHALPDTFGRLDSLTKLNLDQNP-VEV 434

Query: 155 P 155
           P
Sbjct: 435 P 435


>gi|356497728|ref|XP_003517711.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Glycine
           max]
          Length = 461

 Score =  191 bits (486), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/269 (41%), Positives = 164/269 (60%), Gaps = 9/269 (3%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++++DL  + +  LP++ G +  LV L+L  NQ+  +P +++ L RL ELD+ SN L SL
Sbjct: 157 VERVDLSGSHLRILPEAFGKIRGLVVLNLSQNQLEVIPDSIAGLQRLVELDVSSNVLESL 216

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L++LK   V  N L  LP +I  C SL EL   +N L  LP  +G  +  LE L
Sbjct: 217 PDSIGLLVNLKIFNVSANKLTALPESIALCRSLVELDASFNNLMCLPTNMGFGLVNLEKL 276

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N I+ LP ++  + SLR LDV FNEL  +P+S+   T L  +N+ +NF+D+  LP 
Sbjct: 277 LIHLNKIRFLPASIGEMKSLRHLDVHFNELHGLPQSIGKLTNLEYLNVSSNFSDMTELPE 336

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G+L  L ELD+SNNQIR LP SF  L +L  L + +NP+ VPP  +V  GA+AV ++M
Sbjct: 337 TLGDLVNLRELDLSNNQIRALPYSFGRLEKLTKLNLDQNPIIVPPIEVVNQGAEAVKEFM 396

Query: 380 A----DLVEKRDAK----TQPVKQKKSWV 400
           A    DL+E+   K    TQ  + +  W+
Sbjct: 397 AKWWLDLIEEAQQKSMSETQNQQAQTGWL 425



 Score = 45.1 bits (105), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 66/130 (50%), Gaps = 13/130 (10%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+ +   D  E LP+++G L +L  LDLS N+I A+P + G L  L KL+L  N II  
Sbjct: 322 LNVSSNFSDMTE-LPETLGDLVNLRELDLSNNQIRALPYSFGRLEKLTKLNLDQNPIIVP 380

Query: 155 P--------DSIGDLLSLVYLDL-RGNQISALPVALSRLVRLEELDLGS---NNLSSLPD 202
           P        +++ + ++  +LDL    Q  ++    ++  +   L  G+   NN++ + +
Sbjct: 381 PIEVVNQGAEAVKEFMAKWWLDLIEEAQQKSMSETQNQQAQTGWLAWGASLLNNVAEVSE 440

Query: 203 SIGSLISLKK 212
           S+      KK
Sbjct: 441 SVAEYFGAKK 450


>gi|255578319|ref|XP_002530026.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223530442|gb|EEF32326.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 456

 Score =  191 bits (485), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 116/288 (40%), Positives = 172/288 (59%), Gaps = 6/288 (2%)

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            +V++   +   S ++++DL   ++  LP++ G L  LV L+L  NQ+  LP +++ L +
Sbjct: 137 EVVSILKQVESGSVVERVDLSGRQLKLLPEAFGKLHGLVLLNLSRNQLEVLPDSIAGLQK 196

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEELD+ SN L SLPDSIG L +LK L V  N L  LP +I  CSSL EL   +N L +L
Sbjct: 197 LEELDVSSNLLLSLPDSIGLLRTLKVLNVSGNKLNYLPESIALCSSLVELDASFNNLVSL 256

Query: 247 PEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           P  +G  +  LE LS++ N I  LP ++  + SLR LDV FNEL  +P ++   T L  +
Sbjct: 257 PTNIGYGLTNLERLSIQLNKIHILPPSICEMKSLRYLDVHFNELHGLPYAIGRLTNLEVL 316

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++ +NF+DL  LP ++G+L  L EL++SNNQIR LPD+F  L  L  L + ENPL +PP+
Sbjct: 317 DLSSNFSDLTELPETVGDLANLRELNLSNNQIRALPDTFGRLENLANLILDENPLVIPPK 376

Query: 366 NIVEMGAQAVVQYMAD-----LVEKRDAKTQPVKQKKSWVEMCFFSRS 408
            IV  G QAV ++M       + E++  +   V Q++S      +  S
Sbjct: 377 EIVNKGVQAVREFMQKRWLDMIAEEQQRRMLEVNQQQSQTGWLAWGNS 424


>gi|297844192|ref|XP_002889977.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297335819|gb|EFH66236.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 463

 Score =  191 bits (484), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/290 (40%), Positives = 168/290 (57%), Gaps = 17/290 (5%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           + SL   D     ++AV   +     ++++DL    +  LPD++G ++ LV L+L  N +
Sbjct: 137 VESLSGGDEVNEEVLAVIKEVEDGGVVERIDLSDRELKLLPDALGKIVGLVSLNLSRNNL 196

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
             LP  +S L +LEELDL SN L SLPDSIG L++L+ L V  N L  LP +I QC SL 
Sbjct: 197 KFLPDTISGLEKLEELDLSSNRLVSLPDSIGMLLNLRILNVTGNKLTSLPESIAQCRSLV 256

Query: 235 ELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           EL   +N L +LP  +G  +  LE LS++ N I+  P +M  + SLR +D   NE+  +P
Sbjct: 257 ELDASFNNLTSLPANIGYGLLNLERLSIQLNKIRFFPNSMCEMRSLRYIDAHMNEIHGLP 316

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            ++   T+L  MN+ +NF+DL  LP +I +L  L ELD+SNNQIRVLP+SF  L +L  L
Sbjct: 317 IAIGRLTSLEVMNLSSNFSDLTELPDTISDLANLRELDLSNNQIRVLPNSFFRLEKLEKL 376

Query: 354 RVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMC 403
            + +NPLE PP+ +V   A+AV ++M                +K W EM 
Sbjct: 377 NLDQNPLEFPPQEMVNQSAEAVREFM----------------RKRWEEMV 410


>gi|30688342|ref|NP_189281.2| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
 gi|9293927|dbj|BAB01830.1| leucine-rich-repeat protein-like [Arabidopsis thaliana]
 gi|26453000|dbj|BAC43576.1| unknown protein [Arabidopsis thaliana]
 gi|29824149|gb|AAP04035.1| unknown protein [Arabidopsis thaliana]
 gi|57868146|gb|AAW57411.1| plant intracellular Ras-group-related LRR protein 2 [Arabidopsis
           thaliana]
 gi|332643646|gb|AEE77167.1| plant intracellular ras group-related LRR 2 [Arabidopsis thaliana]
          Length = 471

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 173/278 (62%), Gaps = 9/278 (3%)

Query: 127 RIVAV--PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
           +++AV   A  GG  +++++DL +  +  +P++   ++ LVYL+L GN ++ +P A+S+L
Sbjct: 148 KVLAVLKEAESGG--TVERIDLSSQELKLIPEAFWKVVGLVYLNLSGNDLTFIPDAISKL 205

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            +LEELD+ SN+L SLPDSIG L++L+ L V  N+L  LP +I  C SL EL   YN L 
Sbjct: 206 KKLEELDVSSNSLESLPDSIGMLLNLRILNVNANNLTALPESIAHCRSLVELDASYNNLT 265

Query: 245 ALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           +LP  +G  +  LE LS++ N ++  P ++S + +L+ LD   NE+  +P S+   T L 
Sbjct: 266 SLPTNIGYGLQNLERLSIQLNKLRYFPGSISEMYNLKYLDAHMNEIHGIPNSIGRLTKLE 325

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +N+ +NF +L  +P +I +L  L ELD+SNNQI+ +PDSF  L +L  L + +NPLE+P
Sbjct: 326 VLNLSSNFNNLMGVPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDQNPLEIP 385

Query: 364 PRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            + +   GA+ V ++M     KR       +Q++  VE
Sbjct: 386 SQEVATQGAEVVREFM----RKRWGDIMAEQQQRIGVE 419


>gi|449434977|ref|XP_004135272.1| PREDICTED: protein scribble homolog [Cucumis sativus]
 gi|449478610|ref|XP_004155368.1| PREDICTED: protein scribble homolog [Cucumis sativus]
          Length = 501

 Score =  191 bits (484), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/287 (40%), Positives = 175/287 (60%), Gaps = 7/287 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E    ++ +L    +LD++E  I  +     G+  ++K+DL   +I  LP+  G L  L
Sbjct: 162 VEVYESAVAELDKGTNLDVNEEVIRILKEAASGV--VEKVDLFGQQIRFLPEEFGKLRRL 219

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + L+L  NQ+  LP +++ L +L+ LD+ SN L SLPDSIG LI+LK +IV  N L+ LP
Sbjct: 220 IDLNLSHNQLEVLPDSIAGLQKLQRLDISSNLLESLPDSIGVLINLKVVIVSGNKLKVLP 279

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
            TI  CSSL EL   +N L+ LP  +G  +  LE LS++ N I   PT++  L SL+  D
Sbjct: 280 ETITGCSSLVELDASFNNLQGLPINIGYGLVNLERLSIQLNKICYFPTSICQLRSLKYFD 339

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
             FN+L ++P ++   T+L  +N+  NF +L  +P S+ +L  L+ELD+S+NQI+ LPD 
Sbjct: 340 AHFNQLHALPPAIGRLTSLEVLNLSGNFNNLTEVPESMSDLCNLKELDLSDNQIKALPDR 399

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM----ADLVEKR 386
           F  L +L  L + +NPL +PP  IV+ GAQAV  +M    ADLV ++
Sbjct: 400 FGRLEKLLRLNMDQNPLVIPPMEIVDKGAQAVKDFMDMRWADLVAEK 446


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/285 (40%), Positives = 166/285 (58%), Gaps = 21/285 (7%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  LP +IG L+SL SL L  N+I  +P TIG L+SL  L L  N+I ELP +IG+L
Sbjct: 288 FNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNL 347

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L L  NQI+ LP  +  L  L  LDL  N ++ LP +IG+L SL  L +  N + 
Sbjct: 348 TSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIA 407

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP TIG  +SL  L +  N++  LP+ +G + +L  L++  N I +LP T+ +L+SL  
Sbjct: 408 ELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLTSLTS 467

Query: 282 LDVSFNELESVPESLCFATTLVKMN------------IGN--NFADL-------RALPRS 320
           LD+SFN++  +P+ +   T+L  +N            IGN  + +DL         LP++
Sbjct: 468 LDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQT 527

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           IGNL  L +L + NNQI V+P+ FR L+ L  L ++ NP+ +PP 
Sbjct: 528 IGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGNPVPIPPE 572



 Score =  189 bits (480), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/270 (40%), Positives = 165/270 (61%), Gaps = 6/270 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           +NKL +    +P +IGKL+SL SL+L EN+I  +P  IG L+SL  L L +N+I  +P++
Sbjct: 196 ENKLTE----IPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEA 251

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG+L SL  L L  NQI+ +P A+  L  L  LDL  N ++ LP +IG+L SL  L +  
Sbjct: 252 IGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRN 311

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N + ELP TIG  +SL  L +  N++  LP+ +G + +L  L +  N I +LP T+ +L+
Sbjct: 312 NQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIAELPQTIGNLT 371

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL  LD+SFN++  +P+++   T+L  +N+ NN   +  LP++IGNL  L  L +SNNQI
Sbjct: 372 SLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNN--QIAELPQTIGNLTSLTNLFLSNNQI 429

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP +   L+ L  L +  N +   P+ I
Sbjct: 430 AELPQTIGNLTSLTSLNLWSNQIAELPQTI 459



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 157/265 (59%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LP+SI  L +L  L L  N +  +P +I  L+ L++L +  N++ E+P +IG L 
Sbjct: 151 NNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLT 210

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L+L  NQI+ LP  + +L  L  L L SN ++ +P++IG+L SL  L + +N +  
Sbjct: 211 SLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAI 270

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG  +SL  L + +N++  LP+ +G + +L  LS+R N I +LP T+ +L+SL  L
Sbjct: 271 IPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNL 330

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N++  +P+++   T+L  + + NN   +  LP++IGNL  L  LD+S NQI  LP 
Sbjct: 331 FLGRNKIAELPQTIGNLTSLTSLYLSNN--QIAELPQTIGNLTSLTSLDLSFNQIAELPQ 388

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L+ L  L +  N +   P+ I
Sbjct: 389 TIGNLTSLTSLNLYNNQIAELPQTI 413



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 150/265 (56%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP+   +++ L  L L  + +  +P  +  L++L  L    N +  LP+SI +L 
Sbjct: 105 NKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLK 164

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GN +S LP +++ L  LEEL +  N L+ +P +IG L SL  L +  N + E
Sbjct: 165 NLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAE 224

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+ +SL  L++  N++  +PEA+G + +L  L +  N I  +P  + +L+SL  L
Sbjct: 225 LPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSL 284

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+SFN++  +P+++   T+L  +++ NN   +  LP++IGNL  L  L +  N+I  LP 
Sbjct: 285 DLSFNQIAELPQTIGNLTSLTSLSLRNN--QIAELPQTIGNLTSLTNLFLGRNKIAELPQ 342

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L+ L  L +  N +   P+ I
Sbjct: 343 TIGNLTSLTSLYLSNNQIAELPQTI 367



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/265 (33%), Positives = 152/265 (57%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LPD + ++++L  L L  N+I ++P     ++ L +L L  + + E+P+ +  L 
Sbjct: 82  NKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPELVFSLT 141

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L YL    N +  LP ++S L  L++L LG N+LS LP+SI  L  L++L +  N L E
Sbjct: 142 NLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLTE 201

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG+ +SL  L +  N++  LP+ +GK+ +L  L +  N I  +P  + +L+SL  L
Sbjct: 202 IPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLTAL 261

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N++  +PE++   T+L  +++  +F  +  LP++IGNL  L  L + NNQI  LP 
Sbjct: 262 GLSSNQIAIIPEAIGNLTSLTSLDL--SFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQ 319

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L+ L  L +  N +   P+ I
Sbjct: 320 TIGNLTSLTNLFLGRNKIAELPQTI 344



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/318 (32%), Positives = 164/318 (51%), Gaps = 38/318 (11%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE----------NRIVAVP 132
           LI+ ++++  ++L+L      N+  LP  IGKL+ L  L L +          N +  +P
Sbjct: 9   LIDRAAEEQWKELDLAGM---NLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIP 65

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
             I  L  L  LD+  N+I  LPD +  + +L  L L GN+I +LP   S + RL EL L
Sbjct: 66  PVILSLPKLTSLDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGL 125

Query: 193 GS-----------------------NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
           G+                       NNL  LP+SI +L +LKKL +  N L +LP +I  
Sbjct: 126 GNSGLAEIPELVFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIAL 185

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            + L EL +  N+L  +P+A+GK+ +L  L++  N I +LP  +  L+SL  L +  N++
Sbjct: 186 LTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQI 245

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
             +PE++   T+L  + + +N   +  +P +IGNL  L  LD+S NQI  LP +   L+ 
Sbjct: 246 AIIPEAIGNLTSLTALGLSSN--QIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTS 303

Query: 350 LRVLRVQENPLEVPPRNI 367
           L  L ++ N +   P+ I
Sbjct: 304 LTSLSLRNNQIAELPQTI 321



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 114/195 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  LP +IG L+SL SL+L  N+I  +P TIG L+SL  L L  N+I ELP +IG+L
Sbjct: 380 FNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNL 439

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L+L  NQI+ LP  +  L  L  LDL  N ++ LP  IG+L SL  L +  N + 
Sbjct: 440 TSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIA 499

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           EL  TIG  +SL +L +  N++  LP+ +G + +L  L +  N I  +P    SL++L +
Sbjct: 500 ELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEK 559

Query: 282 LDVSFNELESVPESL 296
           LD+  N +   PE L
Sbjct: 560 LDLRGNPVPIPPEIL 574



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/170 (43%), Positives = 105/170 (61%), Gaps = 3/170 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N   + I  LP +IG L+SL +L LS N+I  +P TIG L+SL  L+L +N+I EL
Sbjct: 399 LNLYN---NQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAEL 455

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P +IG+L SL  LDL  NQI+ LP  +  L  L  L+L  N ++ L  +IG+L SL  L 
Sbjct: 456 PQTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLD 515

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           +  N + ELP TIG  +SL +L++  N++  +PE    ++ LE L +R N
Sbjct: 516 LSNNQIAELPQTIGNLTSLTDLKLYNNQIAVIPEWFRSLNNLEKLDLRGN 565


>gi|22330985|ref|NP_187741.2| ras group-related LRR 9 protein [Arabidopsis thaliana]
 gi|18175638|gb|AAL59901.1| unknown protein [Arabidopsis thaliana]
 gi|21689861|gb|AAM67491.1| unknown protein [Arabidopsis thaliana]
 gi|57868160|gb|AAW57418.1| plant intracellular Ras-group-related LRR protein 9 [Arabidopsis
           thaliana]
 gi|332641510|gb|AEE75031.1| ras group-related LRR 9 protein [Arabidopsis thaliana]
          Length = 499

 Score =  190 bits (482), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/241 (43%), Positives = 152/241 (63%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + ++DL   ++  LP++ G +  L+ L+L  N++ ++P +++ L  L ELD+ +N+L +L
Sbjct: 200 VDRVDLSGRKLRLLPEAFGRIQGLLVLNLSNNKLESIPDSIAGLHSLVELDVSTNSLETL 259

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  LK L V TN L  LP +I +C SL  L V +NRL  LP  +G ++  LE L
Sbjct: 260 PDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKL 319

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V+YN I+  PT++  + SL+ LD  FNEL  +P+S    T L  +N+ +NF+DL+ LP 
Sbjct: 320 LVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLPF 379

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S G L  L+ELD+SNNQI  LPD+F  L  L  L V +NPL VPP  +V+ G +AV  YM
Sbjct: 380 SFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYM 439

Query: 380 A 380
            
Sbjct: 440 G 440



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/206 (39%), Positives = 119/206 (57%), Gaps = 6/206 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N   + +E +PDSI  L SLV LD+S N +  +P +IG LS LK L++  N++  L
Sbjct: 226 LNLSN---NKLESIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTSL 282

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           PDSI    SLV LD+  N+++ LP  +   LV LE+L +  N + S P SIG + SLK L
Sbjct: 283 PDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSFPTSIGEMRSLKHL 342

Query: 214 IVETNDLEELPHTIGQCSSLRELRV--DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
               N+L  LP +    ++L  L +  +++ LK LP + G++ +L+ L +  N I  LP 
Sbjct: 343 DAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLPFSFGELISLQELDLSNNQIHALPD 402

Query: 272 TMSSLSSLRELDVSFNELESVPESLC 297
           T  +L SL +L+V  N L   PE + 
Sbjct: 403 TFGTLDSLTKLNVDQNPLVVPPEEVV 428



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 2/99 (2%)

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           +S + +  +D+S  +L  +PE+      L+ +N+ NN   L ++P SI  L  L ELD+S
Sbjct: 195 ASANPVDRVDLSGRKLRLLPEAFGRIQGLLVLNLSNN--KLESIPDSIAGLHSLVELDVS 252

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            N +  LPDS  +LS+L++L V  N L   P +I   G+
Sbjct: 253 TNSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGS 291


>gi|224110878|ref|XP_002315667.1| predicted protein [Populus trichocarpa]
 gi|222864707|gb|EEF01838.1| predicted protein [Populus trichocarpa]
          Length = 447

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/300 (41%), Positives = 180/300 (60%), Gaps = 15/300 (5%)

Query: 125 ENRIVAV--PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           +  +VA+   A  GG  ++++++L A ++  +P+SIG L  L+ L+L  NQ+  LP +++
Sbjct: 139 DEEVVAILREAESGG--AVERVNLSARQLRLIPESIGRLHGLLVLNLSQNQLEVLPDSIA 196

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
            L +L ELD+ SN L  LPDSIG L +LK L V  N ++ LP +I   SSL E+   +N 
Sbjct: 197 GLEKLVELDVSSNLLVFLPDSIGLLRNLKILNVSANKVKALPESIALSSSLVEIDASFNN 256

Query: 243 LKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           L +LP  +G  +  LE LSV+ N I+ LP ++  + SLR LDV FN L  +P ++   T 
Sbjct: 257 LVSLPANIGYGLVNLERLSVQLNKIRLLPPSICEMKSLRFLDVHFNMLRGLPRAIGRLTN 316

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  +N+ +NF+DL  LP  IG+L  L ELD+SNNQIR LPD F  L  L  L + ENPL 
Sbjct: 317 LEVLNLSSNFSDLEELPEEIGDLINLRELDLSNNQIRALPDRFARLENLTKLDLNENPLL 376

Query: 362 VPPRNIVEMGAQAVVQYMA----DLVEKRDAKTQPVKQKKS---WVEMCF-FSRSNKRKR 413
           VPP+ IV  G QA+ ++MA    D+VE++        Q+ +   W  +CF  SR N  KR
Sbjct: 377 VPPKEIVNKGVQAIREFMAKRWLDMVEEKQTNMVEANQQAAQSGW--LCFRLSRRNISKR 434


>gi|449440622|ref|XP_004138083.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449526497|ref|XP_004170250.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 523

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/241 (44%), Positives = 148/241 (61%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + ++ L   R+  LP+  G +  LV LD+  NQ+  +P ++S L  LEEL+  SN L SL
Sbjct: 219 MDRISLTGRRLRFLPEEFGHIRGLVVLDISSNQLQIIPDSISGLENLEELNASSNLLESL 278

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  LK L V  N L  LP TI  C SL EL V +N L  LP  +G ++  LE L
Sbjct: 279 PDSIGLLQKLKLLNVSANKLHALPDTICHCRSLVELDVSFNSLTYLPTNIGLELVNLEKL 338

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           +V+ N ++ LP+++  +SSLR LD  FNEL  +P+++   T L  +N+ +NF DL  LP 
Sbjct: 339 AVQLNKLRSLPSSVCGMSSLRYLDAHFNELHGLPQAIGKLTKLEYLNLSSNFTDLTELPH 398

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + G+L  L ELD+SNNQI  LPD+F  L  L+ L V++NPL VPP  +V  G  AV  +M
Sbjct: 399 TFGDLISLRELDLSNNQIHALPDTFGHLENLKKLNVEQNPLTVPPMEVVSKGPDAVRTFM 458

Query: 380 A 380
           +
Sbjct: 459 S 459



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 62/111 (55%), Gaps = 6/111 (5%)

Query: 73  EKLS--LIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RI 128
           EKL+  L KL SL   SS  G   L   +   + +  LP +IGKL+ L  L+LS N   +
Sbjct: 336 EKLAVQLNKLRSL--PSSVCGMSSLRYLDAHFNELHGLPQAIGKLTKLEYLNLSSNFTDL 393

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
             +P T G L SL++LDL  N+I  LPD+ G L +L  L++  N ++  P+
Sbjct: 394 TELPHTFGDLISLRELDLSNNQIHALPDTFGHLENLKKLNVEQNPLTVPPM 444



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 9/83 (10%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII-- 152
           LNL +   D  E LP + G L SL  LDLS N+I A+P T G L +LKKL++  N +   
Sbjct: 384 LNLSSNFTDLTE-LPHTFGDLISLRELDLSNNQIHALPDTFGHLENLKKLNVEQNPLTVP 442

Query: 153 ------ELPDSIGDLLSLVYLDL 169
                 + PD++   +S  +L++
Sbjct: 443 PMEVVSKGPDAVRTFMSKRWLEI 465


>gi|413937565|gb|AFW72116.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 507

 Score =  188 bits (478), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/257 (42%), Positives = 158/257 (61%), Gaps = 1/257 (0%)

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
           +  +V V    G    +++++L   ++  LP+ IG +  L+ LD+  NQ+  +P A+  L
Sbjct: 183 DEEVVRVLKDAGEGKVVERVNLADRQMRLLPEPIGRIRGLLALDVSRNQLKVIPDAIGGL 242

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             LEEL L SN+L SLPDSIG L +LK L V  N L  LP TI +C SL EL   YN L 
Sbjct: 243 EHLEELRLASNDLVSLPDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLVELDASYNALA 302

Query: 245 ALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            LP  +G ++  L++L V  N ++ LP+++  + SLR LD  FNEL  +P ++   + L 
Sbjct: 303 YLPTGIGHELVDLQILRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALE 362

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +NF+D+R LP S G+L  L ELD+SNNQIR LPD F  L++L  LR+ +NPL VP
Sbjct: 363 TLDLSSNFSDMRDLPPSFGDLAGLRELDLSNNQIRALPDCFGRLAKLERLRLDQNPLAVP 422

Query: 364 PRNIVEMGAQAVVQYMA 380
           P  +V  G  AV +YMA
Sbjct: 423 PPEVVADGVVAVNEYMA 439


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  188 bits (477), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/263 (42%), Positives = 160/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++ G L+SL  L LS N++ A+P   G L+SL+ L L+ N+I  LP+SIG+L SL  L
Sbjct: 54  LPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSL 113

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ALP A   L  L  LDL SN L+ LPDS+G+L SLK L +  N L+ LP + 
Sbjct: 114 DLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSA 173

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  +SL  L +  N+L ALPEA G + +L  L +  N I  LP ++ +L++LR L +  N
Sbjct: 174 GNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNN 233

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PES+   T L  + +  N   L ALP + GNL  L +L +S NQ+  LP++F  L
Sbjct: 234 QLNTLPESIVNLTNLTDLYLSEN--QLNALPETFGNLSSLTDLYLSGNQLNALPETFGNL 291

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           S L  L +  N L   P +I ++
Sbjct: 292 SSLTYLYLNSNQLTGLPESIGQL 314



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/285 (39%), Positives = 170/285 (59%), Gaps = 5/285 (1%)

Query: 80  LASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLS 139
           + +LI  ++K+  ++LNL    MD +  LP  IG L+SL  L L+ N++  +P   G L+
Sbjct: 6   VQNLIAQAAKEQWKELNLSG--MD-LSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLT 62

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL  L L AN++  LP++ G+L SL YL L  NQI+ALP ++  L  L  LDL +N L++
Sbjct: 63  SLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNA 122

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++ G+L SL  L + +N L  LP ++G  +SL+ L ++ N+LKALP++ G + +L  L
Sbjct: 123 LPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFL 182

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP    +LSSL  L +S N++ ++PES+   T L  + + NN   L  LP 
Sbjct: 183 DLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNN--QLNTLPE 240

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           SI NL  L +L +S NQ+  LP++F  LS L  L +  N L   P
Sbjct: 241 SIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALP 285



 Score =  175 bits (443), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/267 (40%), Positives = 164/267 (61%), Gaps = 4/267 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           KL +N I  LP+SIG L+SL SLDLS N++ A+P   G L+SL  LDL++N +  LPDS+
Sbjct: 91  KLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSV 150

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G+L SL +L L  NQ+ ALP +   L  L  LDL  N L++LP++ G+L SL  L +  N
Sbjct: 151 GNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGN 210

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            +  LP +IG  ++LR L +  N+L  LPE++  +  L  L +  N +  LP T  +LSS
Sbjct: 211 QINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSS 270

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L +L +S N+L ++PE+    ++L  + + +N   L  LP SIG L  L+EL + +N++ 
Sbjct: 271 LTDLYLSGNQLNALPETFGNLSSLTYLYLNSN--QLTGLPESIGQLNKLKELILYDNKLL 328

Query: 339 VLPDSFRMLSRLRVLRVQENPL-EVPP 364
            LP     L++L+ L ++ N L E+PP
Sbjct: 329 TLPQELTKLTQLKKLDIRNNDLGELPP 355



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 2/214 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDS+G L+SL  L L+ N++ A+P + G L+SL  LDL  N++  LP++ G+L SL YL
Sbjct: 146 LPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYL 205

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQI+ALP ++  L  L  L L +N L++LP+SI +L +L  L +  N L  LP T 
Sbjct: 206 YLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETF 265

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  SSL +L +  N+L ALPE  G + +L  L +  N +  LP ++  L+ L+EL +  N
Sbjct: 266 GNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDN 325

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           +L ++P+ L   T L K++I NN  DL  LP  +
Sbjct: 326 KLLTLPQELTKLTQLKKLDIRNN--DLGELPPEV 357



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 90/153 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+SIG L++L  L L  N++  +P +I  L++L  L L  N++  LP++ G+L 
Sbjct: 210 NQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLS 269

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L GNQ++ALP     L  L  L L SN L+ LP+SIG L  LK+LI+  N L  
Sbjct: 270 SLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLT 329

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           LP  + + + L++L +  N L  LP  V + +T
Sbjct: 330 LPQELTKLTQLKKLDIRNNDLGELPPEVKRKYT 362


>gi|356508718|ref|XP_003523101.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Glycine max]
          Length = 513

 Score =  186 bits (473), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/278 (39%), Positives = 164/278 (58%), Gaps = 8/278 (2%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++++DL   ++  LP++ G +  L+  DL  NQ+SA+P +++ L  LEEL+L SN L S
Sbjct: 205 GMERIDLSGRQLKLLPEAFGRISGLLVFDLSTNQLSAIPDSIAGLQNLEELNLSSNLLES 264

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LPDSIG L  LK L V  N L  LP +I QC SL EL V +N L  LP  +G ++  L+ 
Sbjct: 265 LPDSIGLLQKLKLLNVSGNKLTALPDSICQCRSLVELDVSFNNLSYLPTNIGYELPNLQK 324

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I+  P+++  L SL  LD  FNEL  +P ++   T L  +N+ +NF+DL+ LP
Sbjct: 325 LMIYLNKIRSFPSSICELKSLHYLDAHFNELHGLPIAIGRLTNLEVLNLSSNFSDLKELP 384

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            + G+L  L ELD+SNNQI  LPD+F  L  L  L +++NPLE+PP  IV  G +A+  +
Sbjct: 385 ETFGDLANLRELDLSNNQIHALPDTFGRLDNLIKLNLEQNPLELPPMEIVNQGLEAIKTF 444

Query: 379 MAD-----LVEKRDAKTQPVK--QKKSWVEMCFFSRSN 409
           MA      L+E+     Q ++  ++  W+    F   N
Sbjct: 445 MAKRWLDILLEEERKSNQEMQEPEQGGWLTRSTFWLKN 482



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 55/91 (60%), Gaps = 2/91 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           + L+  +   + +  LP +IG+L++L  L+LS N   +  +P T G L++L++LDL  N+
Sbjct: 343 KSLHYLDAHFNELHGLPIAIGRLTNLEVLNLSSNFSDLKELPETFGDLANLRELDLSNNQ 402

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           I  LPD+ G L +L+ L+L  N +   P+ +
Sbjct: 403 IHALPDTFGRLDNLIKLNLEQNPLELPPMEI 433


>gi|224133674|ref|XP_002321633.1| predicted protein [Populus trichocarpa]
 gi|222868629|gb|EEF05760.1| predicted protein [Populus trichocarpa]
          Length = 515

 Score =  185 bits (470), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/276 (40%), Positives = 166/276 (60%), Gaps = 8/276 (2%)

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           G    ++++DL   R+  LP+  G ++ L  L+L  NQ+  +P +++ L  LEEL+L SN
Sbjct: 207 GSSKGIERVDLSNRRLRFLPEGFGRVVGLKVLNLSNNQLQVIPDSITGLEILEELNLASN 266

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIH 254
            L +LPDSIG L +LK L V +N +E LP TI  C SL EL V +N L  LP  +G ++ 
Sbjct: 267 LLEALPDSIGLLQNLKILDVSSNKIEVLPGTICHCRSLLELDVSFNCLTYLPTNIGHEMS 326

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS++ N I  LPT++  + SLR LD  FNEL  +P ++   T L  +N+  NF+DL
Sbjct: 327 NLQRLSIQLNKIFSLPTSIGEMRSLRHLDAHFNELRGLPLAIGKLTNLEILNLSGNFSDL 386

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
           + LP + G+L  L+ELD+SNNQI  LPDSF  L  L  L + +NPL +PP  +++ G +A
Sbjct: 387 KELPETFGDLTNLKELDLSNNQISALPDSFGRLDNLTKLNLDQNPLVIPPPEVIKEGVEA 446

Query: 375 VVQYMAD-----LVEKRDAKTQPVKQKK--SWVEMC 403
           V  +MA      LVE+    T  V+++    W+ + 
Sbjct: 447 VKIFMAKRWIDILVEEERKSTLEVQEQAQTGWLTLS 482



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 139/227 (61%), Gaps = 6/227 (2%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
            S KG   ++L N+    + +LP+  G++  L  L+LS N++  +P +I GL  L++L+L
Sbjct: 207 GSSKGIERVDLSNR---RLRFLPEGFGRVVGLKVLNLSNNQLQVIPDSITGLEILEELNL 263

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            +N +  LPDSIG L +L  LD+  N+I  LP  +     L ELD+  N L+ LP +IG 
Sbjct: 264 ASNLLEALPDSIGLLQNLKILDVSSNKIEVLPGTICHCRSLLELDVSFNCLTYLPTNIGH 323

Query: 207 LIS-LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV--LSVRY 263
            +S L++L ++ N +  LP +IG+  SLR L   +N L+ LP A+GK+  LE+  LS  +
Sbjct: 324 EMSNLQRLSIQLNKIFSLPTSIGEMRSLRHLDAHFNELRGLPLAIGKLTNLEILNLSGNF 383

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           +++K+LP T   L++L+ELD+S N++ ++P+S      L K+N+  N
Sbjct: 384 SDLKELPETFGDLTNLKELDLSNNQISALPDSFGRLDNLTKLNLDQN 430



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL     D ++ LP++ G L++L  LDLS N+I A+P + G L +L KL+L  N ++  
Sbjct: 377 LNLSGNFSD-LKELPETFGDLTNLKELDLSNNQISALPDSFGRLDNLTKLNLDQNPLVIP 435

Query: 155 PDSI 158
           P  +
Sbjct: 436 PPEV 439


>gi|297833920|ref|XP_002884842.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297330682|gb|EFH61101.1| hypothetical protein ARALYDRAFT_317922 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 537

 Score =  185 bits (469), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/274 (41%), Positives = 164/274 (59%), Gaps = 16/274 (5%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++ G++  L+ L+LS N++      I  L ++   D+HA+  +   DS     S VY+
Sbjct: 220 LPEAFGRIQGLLVLNLSNNKLELSYGLIQILQAIAA-DVHASSFV---DS-----SEVYV 270

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                   A+P +++ L  L ELD+ +N+L +LPDSIG L  LK L V TN L  LP +I
Sbjct: 271 Q------QAIPDSIAGLHSLVELDVSTNSLETLPDSIGLLSKLKILNVSTNKLTCLPDSI 324

Query: 228 GQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
            +C SL  L V +NRL  LP  +G ++  LE L V+YN I+  PT++  + SL+ LD  F
Sbjct: 325 CRCGSLVILDVSFNRLTYLPTNIGLELVNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHF 384

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           NEL  +P+S    T L  +N+ +NF+DL+ LP S G+L  L+ELD+SNNQI  LPD+F  
Sbjct: 385 NELYGLPDSFVLLTNLEYLNLSSNFSDLKDLPSSFGDLISLQELDLSNNQIHALPDTFGT 444

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           L  L  L V +NPL VPP  +V+ G +AV  YM 
Sbjct: 445 LDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYMG 478



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/161 (42%), Positives = 92/161 (57%), Gaps = 3/161 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIE 153
           L + N   + +  LPDSI +  SLV LD+S NR+  +P  IG  L +L+KL +  N+I  
Sbjct: 307 LKILNVSTNKLTCLPDSICRCGSLVILDVSFNRLTYLPTNIGLELVNLEKLLVQYNKIRS 366

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLK 211
            P SIG++ SL +LD   N++  LP +   L  LE L+L SN  +L  LP S G LISL+
Sbjct: 367 FPTSIGEMRSLKHLDAHFNELYGLPDSFVLLTNLEYLNLSSNFSDLKDLPSSFGDLISLQ 426

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
           +L +  N +  LP T G   SL +L VD N L   PE V K
Sbjct: 427 ELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVK 467


>gi|18391461|ref|NP_563921.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
 gi|17063165|gb|AAL32979.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|21700931|gb|AAM70589.1| At1g12970/F13K23_18 [Arabidopsis thaliana]
 gi|57868148|gb|AAW57412.1| plant intracellular Ras-group-related LRR protein 3 [Arabidopsis
           thaliana]
 gi|332190834|gb|AEE28955.1| ras group-related protein LRR 3 [Arabidopsis thaliana]
          Length = 464

 Score =  184 bits (467), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/304 (39%), Positives = 174/304 (57%), Gaps = 26/304 (8%)

Query: 108 LPDSIGKL-----SSLVSLDLSENRIVAV--PATIGGLSSLKKLDLHANRIIELPDSIGD 160
           L + IG++      SL   D     ++AV   A  GG+  ++++DL  + +  LPD++G 
Sbjct: 125 LEEEIGRVYASAVESLSGGDEVNEEVLAVIKDAEDGGV--VERIDLSDHELKLLPDALGK 182

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           ++ LV L++  N +  LP  +S L +LEELDL SN L  LPDSIG L++L+ L V  N L
Sbjct: 183 IVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKL 242

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             LP +I QC SL EL   +N L +LP   G  +  LE LS++ N I+  P ++  + SL
Sbjct: 243 TLLPESIAQCRSLVELDASFNNLTSLPANFGYGLLNLERLSIQLNKIRFFPNSICEMRSL 302

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R LD   NE+  +P ++   T L  MN+ +NF+DL  LP +I +L  L ELD+SNNQIRV
Sbjct: 303 RYLDAHMNEIHGLPIAIGRLTNLEVMNLSSNFSDLIELPDTISDLANLRELDLSNNQIRV 362

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSW 399
           LPDSF  L +L  L + +NPLE PP+ +V   A+AV ++M                +K W
Sbjct: 363 LPDSFFRLEKLEKLNLDQNPLEYPPQEMVNQSAEAVREFM----------------RKRW 406

Query: 400 VEMC 403
            EM 
Sbjct: 407 EEMV 410



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 24/192 (12%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRII 152
           +L + N   + +  LP+SI +  SLV LD S N + ++PA  G GL +L++L +  N+I 
Sbjct: 231 NLRILNVTGNKLTLLPESIAQCRSLVELDASFNNLTSLPANFGYGLLNLERLSIQLNKIR 290

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
             P+SI ++ SL YLD   N+I  LP+A+ RL  LE ++L SN                 
Sbjct: 291 FFPNSICEMRSLRYLDAHMNEIHGLPIAIGRLTNLEVMNLSSN----------------- 333

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
                +DL ELP TI   ++LREL +  N+++ LP++  ++  LE L++  N ++  P  
Sbjct: 334 ----FSDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEYPPQE 389

Query: 273 M--SSLSSLREL 282
           M   S  ++RE 
Sbjct: 390 MVNQSAEAVREF 401


>gi|242062170|ref|XP_002452374.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
 gi|241932205|gb|EES05350.1| hypothetical protein SORBIDRAFT_04g024650 [Sorghum bicolor]
          Length = 503

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/242 (43%), Positives = 151/242 (62%), Gaps = 3/242 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           +++++L   ++  LP+ +G +  L+ LD+  N++  +P A+  L  LEEL L SN+L SL
Sbjct: 199 VERVNLADRQLHLLPEPVGRIRGLLALDVSRNRLKEVPDAIGGLEHLEELRLASNDLVSL 258

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK--IHTLEV 258
           PDSIG L +LK L V  N L  LP TI +C SL EL   YN L  LP  +G   +H L+ 
Sbjct: 259 PDSIGLLSNLKILDVSGNRLRVLPDTISKCRSLMELDASYNALAYLPTGIGHELVH-LQT 317

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L V  N ++ LP+++  + SLR LD  FNEL  +P ++   + L  +++ +NF+D+R LP
Sbjct: 318 LRVHLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALETLDLSSNFSDMRDLP 377

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S G+L  L ELD+SNNQIR LPD F  L +L  LR+ +NPL VPP  +V  G  AV +Y
Sbjct: 378 PSFGDLAGLRELDLSNNQIRALPDCFGRLGKLERLRLDQNPLAVPPPEVVADGVVAVNEY 437

Query: 379 MA 380
           MA
Sbjct: 438 MA 439



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 2/105 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--RIIELPDSIG 159
           ++ +  LP S+ ++ SL  LD   N +  +PA IG LS+L+ LDL +N   + +LP S G
Sbjct: 322 LNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALETLDLSSNFSDMRDLPPSFG 381

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  L  LDL  NQI ALP    RL +LE L L  N L+  P  +
Sbjct: 382 DLAGLRELDLSNNQIRALPDCFGRLGKLERLRLDQNPLAVPPPEV 426


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  183 bits (465), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/296 (37%), Positives = 172/296 (58%), Gaps = 5/296 (1%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT 134
           LS  +L++L EV  ++    LNL++   + +  LP+ +G+L SL SLDLS N++  +P  
Sbjct: 147 LSSNQLSTLPEVVGQQSLTSLNLRS---NQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEV 203

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           +G L SL  LDL  N++  LP+ +G L SL  L+L  NQ+S LP  + +L  L  LDL S
Sbjct: 204 VGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSS 263

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N LS+LP+ +G L SL  L + +N L  LP  +GQ  SL  L +  N+L  LPE VG++ 
Sbjct: 264 NQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQ 323

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +L  L++R N +  LP  +  L SL  L +S N+L ++PE++    +L  +N+ +N   L
Sbjct: 324 SLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSN--QL 381

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP  +G L+ L  LD+S+NQ+  LP+    L  L  L ++ N L   P  + ++
Sbjct: 382 STLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQL 437



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 154/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+L SL SL L  N++  +P  +G L SL  LDL +N++  LP+ +G L SL  L
Sbjct: 269 LPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 328

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR NQ+S LP  + +L  L  L L SN LS+LP+++G L SL  L + +N L  LP  +
Sbjct: 329 NLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLSTLPEVV 388

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL  L +  N+L  LPE VG++ +L  L +R N +  LP  +  L SL  LD+S N
Sbjct: 389 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSN 448

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +    +L  +N+ +N   L  LP ++G L+ L  LD+S+NQ+  LP+    L
Sbjct: 449 QLSTLPEVVGQLQSLTSLNLRSN--QLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQL 506

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L ++ N L   P  + ++
Sbjct: 507 QSLTSLDLRSNQLSTLPEVVGQL 529



 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 171/309 (55%), Gaps = 14/309 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+++G+L SL SL+LS N++  +P  +G L SL  LDL +N++  LP+ +G L SL  L
Sbjct: 361 LPEAVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 420

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR NQ+S LP A+ +L  L  LDL SN LS+LP+ +G L SL  L + +N L  LP  +
Sbjct: 421 YLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAV 480

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL  L +  N+L  LPE VG++ +L  L +R N +  LP  +  L SL  LD+S N
Sbjct: 481 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSN 540

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +    +L  + + +N   L  LP  IG L+ L  LD+S+NQ+  LP     L
Sbjct: 541 QLSTLPEVVGQLQSLTSLYLRSN--QLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQL 598

Query: 348 SRLRVLRVQENPLEVPPRNI--------VEMGAQAVV--QYMADLVEKRDAKTQPVKQKK 397
             L  L +  N LE  P  +        + +G+ +++   Y  +++    A  Q    K 
Sbjct: 599 DTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQ--GNKL 656

Query: 398 SWVEMCFFS 406
           + +  C FS
Sbjct: 657 THISDCLFS 665



 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/297 (36%), Positives = 169/297 (56%), Gaps = 6/297 (2%)

Query: 75  LSLIKLASLIEVSSK-KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  +L++L EV  + +    LNL++   + +  LP+ +G+L SL SL LS N++  +P 
Sbjct: 307 LSSNQLSTLPEVVGQLQSLTSLNLRS---NQLSTLPEVVGQLQSLTSLYLSSNQLSTLPE 363

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            +G L SL  L+L +N++  LP+ +G L SL  LDL  NQ+S LP  + +L  L  L L 
Sbjct: 364 AVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR 423

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           SN LS+LP+++G L SL  L + +N L  LP  +GQ  SL  L +  N+L  LPEAVG++
Sbjct: 424 SNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQL 483

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
            +L  L +  N +  LP  +  L SL  LD+  N+L ++PE +    +L  +++ +N   
Sbjct: 484 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSN--Q 541

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  LP  +G L+ L  L + +NQ+  LP+    L  L  L + +N L   PR I ++
Sbjct: 542 LSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQL 598



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/300 (36%), Positives = 155/300 (51%), Gaps = 43/300 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+L SL SL L  N++  +P  +G L SL  LDL +N++  LP+ +G L SL  L
Sbjct: 407 LPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSL 466

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR NQ+S LP A+ +L  L  LDL SN LS+LP+ +G L SL  L + +N L  LP  +
Sbjct: 467 NLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVV 526

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL  L +  N+L  LPE VG++ +L  L +R N +  LP  +  L SL  LD+S N
Sbjct: 527 GQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDN 586

Query: 288 ELESVPESLCFATTLVKMNIGNNFAD-------------------------------LRA 316
           +L  +P  +C   TL  + +G NF +                               LRA
Sbjct: 587 QLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRA 646

Query: 317 LPRS-IGN-----------LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
              S  GN           L  LE LD+S NQ+  +    + L +L+ + ++ NPL +PP
Sbjct: 647 FGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPLPIPP 706



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 153/268 (57%), Gaps = 3/268 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LPD IG+L+ L SL L+ N+   +P  +G L  L+ L+L +N++  LP+ +G L 
Sbjct: 58  NNLQTLPDEIGRLTELRSLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQ 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR NQ+S LP  + +L  L  LDL SN LS+LP+ +G   SL  L + +N L  
Sbjct: 118 SLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQ-SLTSLNLRSNQLST 176

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +GQ  SL  L +  N+L  LPE VG++ +L  L + +N +  LP  +  L SL  L
Sbjct: 177 LPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSL 236

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++PE +    +L  +++ +N   L  LP  +G L+ L  L + +NQ+  LP+
Sbjct: 237 NLSSNQLSTLPEVVGQLQSLTSLDLSSN--QLSTLPEVVGQLQSLTSLYLRSNQLSTLPE 294

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +   L  L  L +  N L   P  + ++
Sbjct: 295 AVGQLQSLTSLDLSSNQLSTLPEVVGQL 322



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 154/278 (55%), Gaps = 6/278 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R LNL +   + +  LP+ +G+L SL SL L  N++  +P  +G L SL  LDL +N++ 
Sbjct: 97  RSLNLSS---NQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLS 153

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ +G   SL  L+LR NQ+S LP  + +L  L  LDL SN LS+LP+ +G L SL  
Sbjct: 154 TLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTS 212

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  +GQ  SL  L +  N+L  LPE VG++ +L  L +  N +  LP  
Sbjct: 213 LDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEV 272

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L SL  L +  N+L ++PE++    +L  +++ +N   L  LP  +G L+ L  L++
Sbjct: 273 VGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSN--QLSTLPEVVGQLQSLTSLNL 330

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP+    L  L  L +  N L   P  + ++
Sbjct: 331 RSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQL 368



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 115/236 (48%), Gaps = 12/236 (5%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDL---------RGNQISALPVALSRLVRLEELDLGS 194
           LDL    I ELP  IG L  L  L L         RGN +  LP  + RL  L  L L  
Sbjct: 21  LDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAY 80

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N    +P+ +G L  L+ L + +N L  LP  +GQ  SL  L +  N+L  LPE VG++ 
Sbjct: 81  NQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQ 140

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +L  L +  N +  LP  +    SL  L++  N+L ++PE +    +L  +++ +N   L
Sbjct: 141 SLTSLDLSSNQLSTLPEVVGQ-QSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSN--QL 197

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP  +G L+ L  LD+S NQ+  LP+    L  L  L +  N L   P  + ++
Sbjct: 198 STLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVGQL 253



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 133/266 (50%), Gaps = 49/266 (18%)

Query: 75  LSLIKLASLIEVSSK-KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  +L++L EV  + +    LNL++   + +  LP+++G+L SL SLDLS N++  +P 
Sbjct: 445 LSSNQLSTLPEVVGQLQSLTSLNLRS---NQLSTLPEAVGQLQSLTSLDLSSNQLSTLPE 501

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            +G L SL  LDL +N++  LP+ +G L SL  LDL  NQ+S LP  + +L  L  L L 
Sbjct: 502 VVGQLQSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLR 561

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           SN LS+LP+ IG L SL  L +  N L ELP  I Q  +L  L +  N L+ LP  + ++
Sbjct: 562 SNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRL 621

Query: 254 ------------------------------------H---------TLEVLSVRYNNIKQ 268
                                               H         +LEVL + +N + +
Sbjct: 622 LHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSR 681

Query: 269 LPTTMSSLSSLRELDVSFNELESVPE 294
           + + + SL  L+++D+  N L   PE
Sbjct: 682 VDSKIQSLEKLKQIDLRGNPLPIPPE 707



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 62/217 (28%), Positives = 83/217 (38%), Gaps = 79/217 (36%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+L SL SLDLS N++  +P  +G L SL  L L +N++  LP+ IG L SL  L
Sbjct: 522 LPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSL 581

Query: 168 DLRGNQIS-----------------------ALPVALSRLVRLEEL-------------- 190
           DL  NQ+S                        LP  LSRL+ LE+L              
Sbjct: 582 DLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDSYYH 641

Query: 191 -------------------------------DLGSNNLSSLPDSIGSLISLKKLIVETND 219
                                          DL  N LS +   I SL  LK++ +  N 
Sbjct: 642 NVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLRGNP 701

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L   P  +G            NR  A P  + KI + 
Sbjct: 702 LPIPPEILGG-----------NRAGAQPGEIAKIFSF 727


>gi|357461813|ref|XP_003601188.1| Leucine-rich-repeat protein [Medicago truncatula]
 gi|355490236|gb|AES71439.1| Leucine-rich-repeat protein [Medicago truncatula]
          Length = 510

 Score =  182 bits (463), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/280 (39%), Positives = 166/280 (59%), Gaps = 7/280 (2%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++++++   ++  LP++ G +  L+ LD   N +S +P ++  L  LEEL+L +N+L S
Sbjct: 201 GMERIEISDRKLKVLPEAFGRIPGLLVLDASKNLLSVIPDSIVGLQNLEELNLSANHLES 260

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LPDSIG L  LK L V  N L  LP  I QC SL EL V +N L  LP  +G ++  L+ 
Sbjct: 261 LPDSIGFLQKLKLLNVSGNKLTALPDAICQCRSLVELDVSFNDLSYLPTNIGYELPNLKK 320

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L ++ N I+ LP+++  L SL  LD   NEL  +P +    TTL  +N+ +NFADL+ LP
Sbjct: 321 LMIQLNKIRSLPSSICELKSLCYLDAHVNELHGLPAAFGRLTTLEILNLSSNFADLKELP 380

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            + G L  L+ELD+SNNQI  LPD+F  L  L  L +++NPLE+PP  IV  G QA+  +
Sbjct: 381 ETFGELTNLKELDVSNNQIHALPDTFGCLDNLTKLNLEQNPLELPPVEIVNQGVQAIKTF 440

Query: 379 MAD----LVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRN 414
           MA     ++E+ + K+    Q++   E  + +RS    +N
Sbjct: 441 MAKRWIAMLEEEELKSNQEMQEQG--EGGWLTRSTSWLKN 478


>gi|15239256|ref|NP_196204.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
 gi|9759110|dbj|BAB09679.1| unnamed protein product [Arabidopsis thaliana]
 gi|53850485|gb|AAU95419.1| At5g05850 [Arabidopsis thaliana]
 gi|55733731|gb|AAV59262.1| At5g05850 [Arabidopsis thaliana]
 gi|57868144|gb|AAW57410.1| plant intracellular Ras-group-related LRR protein 1 [Arabidopsis
           thaliana]
 gi|110737851|dbj|BAF00864.1| hypothetical protein [Arabidopsis thaliana]
 gi|332003549|gb|AED90932.1| plant intracellular ras group-related LRR 1 [Arabidopsis thaliana]
          Length = 506

 Score =  182 bits (461), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 105/241 (43%), Positives = 145/241 (60%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L ++DL   ++  LP++ G +  L+ L+L  NQ+ A+P +++ L  L ELD+ +N L +L
Sbjct: 206 LDRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQLQAIPDSIAGLHNLLELDVSTNFLETL 265

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  LK L V  N L  LP +I  C SL  L   YN L  LP  +G ++  LE L
Sbjct: 266 PDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVVLDASYNNLTYLPTNIGFELVKLEKL 325

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N I+ LPT++  + SLR LD  FNEL  +P S    T L  +N+ +NF+DL+ LP 
Sbjct: 326 LIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGLPNSFGLLTNLEYLNLSSNFSDLQDLPA 385

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S G+L  L+ELD+SNNQI  LPD+F  L  L  L + +NPL VPP  +V+ G  AV  YM
Sbjct: 386 SFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLNLDQNPLVVPPDEVVKQGVDAVKMYM 445

Query: 380 A 380
            
Sbjct: 446 G 446


>gi|297810689|ref|XP_002873228.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297319065|gb|EFH49487.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 506

 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 104/241 (43%), Positives = 145/241 (60%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L ++DL   ++  LP++ G +  L+ L+L  NQ+ A+P +++ L  L ELD+ +N L +L
Sbjct: 206 LDRVDLSGRKLKLLPEAFGKIQGLLVLNLYNNQLEAIPDSIAGLQNLLELDVSTNFLETL 265

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  LK L V  N L  LP +I  C SL  L   YN L  LP  +G ++  +E L
Sbjct: 266 PDSIGLLSKLKILNVSCNKLTTLPDSICHCGSLVVLDASYNNLTYLPTNIGFELVKVEKL 325

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N I+ LPT++  + SLR LD  FNEL  +P S    T L  +N+ +NF+DL+ LP 
Sbjct: 326 LIHLNKIRSLPTSIGEMRSLRYLDAHFNELNGLPNSFGLLTNLEYLNLSSNFSDLQDLPA 385

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S G+L  L+ELD+SNNQI  LPD+F  L  L  L + +NPL VPP  +V+ G  AV  YM
Sbjct: 386 SFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLNLDQNPLVVPPEEVVKQGVGAVKMYM 445

Query: 380 A 380
            
Sbjct: 446 G 446


>gi|115447043|ref|NP_001047301.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|46805022|dbj|BAD16887.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|50726485|dbj|BAD34094.1| putative leucine-rich protein [Oryza sativa Japonica Group]
 gi|113536832|dbj|BAF09215.1| Os02g0593600 [Oryza sativa Japonica Group]
 gi|125582715|gb|EAZ23646.1| hypothetical protein OsJ_07347 [Oryza sativa Japonica Group]
 gi|215697713|dbj|BAG91707.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 501

 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/263 (42%), Positives = 158/263 (60%), Gaps = 3/263 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           ++++L L   ++  LP+ +G +  L+ LD+  NQ+  +P A+  L  LEEL L SN L S
Sbjct: 192 AVERLLLADRQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVS 251

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEV 258
           LPDSIG L SLK L V  N L  LP +I +C SL EL V YN L  LP  +G+ +  LE 
Sbjct: 252 LPDSIGLLTSLKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLPTGIGQEMARLEK 311

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L V  N ++ LP+++  + SLR LD  FN+L  +P  +     L  +N+ +NF+D+R LP
Sbjct: 312 LWVHLNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLP 371

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S G+L  L ELD+SNNQI  LPD F  L RL  LR+ +NPL VPP+ +V  G  AV +Y
Sbjct: 372 ASFGDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKEY 431

Query: 379 MADLVEKRDAKTQPVKQKKSWVE 401
           MA     RDA+ +  ++  +  E
Sbjct: 432 MAR--RWRDARAEEERRGSAVAE 452



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--RIIELPDSIG 159
           ++ +  LP S+ ++ SL  LD   N++  +PA IG L++L+ L+L +N   + +LP S G
Sbjct: 316 LNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLPASFG 375

Query: 160 DLLSLVYLDLRGNQISALP 178
           DLL L  LDL  NQI ALP
Sbjct: 376 DLLGLRELDLSNNQIHALP 394


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/295 (40%), Positives = 179/295 (60%), Gaps = 9/295 (3%)

Query: 77  LIKLASLIEVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
           LIKL   I  SS    ++LNL +N+L D    +PD IG L+ L  L LS N++  +P  I
Sbjct: 67  LIKLPKTI--SSLTQLKELNLRENQLAD----VPDEIGFLTQLQELWLSSNQLTHLPEMI 120

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           G L+ L++L L++N++ +LP+S+ +L  L +L L  N ++ LP  +  L  L ELDL  N
Sbjct: 121 GSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKEN 180

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L+SLP+S+GSLI LKKL +  N L  LP +IG  S L EL +  N+L +LP+++G +  
Sbjct: 181 QLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQ 240

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ L V  N +  LP ++ SL  LR++D+S N+L  +PES+   T L  +++  N   L+
Sbjct: 241 LKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGN--QLK 298

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP SIG+L  L  L +SNNQ+  LP +   L+ L  LR+ +N L   P +I ++
Sbjct: 299 HLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESISDL 353



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/275 (38%), Positives = 168/275 (61%), Gaps = 5/275 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L+L+N   + +  LP++IG L  L  L+L+ N ++ +P TI  L+ LK+L+L  N++ 
Sbjct: 35  QELSLEN---NQLTELPEAIGSLIQLQELNLASNLLIKLPKTISSLTQLKELNLRENQLA 91

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ++PD IG L  L  L L  NQ++ LP  +  L +L+EL L SN L+ LP+S+ +L  L  
Sbjct: 92  DVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLTDLPESLANLTRLNW 151

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +ETN L  LP TIG  + L EL +  N+L +LPE+VG +  L+ L +  N +  LP +
Sbjct: 152 LSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPES 211

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           + SLS L EL +  N+L S+P+S+     L ++ + NN   L  LP SIG+L  L ++D+
Sbjct: 212 IGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNN--QLSNLPGSIGSLRRLRKIDL 269

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S+NQ+  LP+S   L++L  L +  N L+  P +I
Sbjct: 270 SDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESI 304



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 157/260 (60%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SIG L+ L  L +S N++  +P +I  L +L++L L  N++ ELP++IG L+ L  L
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N +  LP  +S L +L+EL+L  N L+ +PD IG L  L++L + +N L  LP  I
Sbjct: 61  NLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMI 120

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L+EL +  N+L  LPE++  +  L  LS+  N++  LP T+ SL+ L ELD+  N
Sbjct: 121 GSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKEN 180

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+PES+     L K+++ +N   L  LP SIG+L  L EL + NNQ+  LP S   L
Sbjct: 181 QLTSLPESVGSLIRLKKLDLADN--QLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHL 238

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L+ L V  N L   P +I
Sbjct: 239 KQLKELCVCNNQLSNLPGSI 258



 Score =  161 bits (407), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 104/253 (41%), Positives = 155/253 (61%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++IG L+ L  LDL EN++ ++P ++G L  LKKLDL  N++  LP+SIG L  L  L
Sbjct: 162 LPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIGSLSRLNEL 221

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP ++  L +L+EL + +N LS+LP SIGSL  L+K+ +  N L  LP +I
Sbjct: 222 CLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESI 281

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L  L +  N+LK LPE++G +  L  LS+  N + +LPT + SL+ L  L +S N
Sbjct: 282 GSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDN 341

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +PES+   T L  +N+  N   L  LP +IG L  LE   +S NQ+  LP+S   L
Sbjct: 342 QLTEIPESISDLTELEWLNLSRN--QLTELPAAIGLLTELETFYLSENQLTELPESIGAL 399

Query: 348 SRLRVLRVQENPL 360
            +L  + + +N L
Sbjct: 400 IQLDWIFLDDNQL 412



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 129/228 (56%), Gaps = 2/228 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SIG L  L  L +  N++  +P +IG L  L+K+DL  N++  LP+SIG L  L +L
Sbjct: 231 LPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESIGSLTQLYWL 290

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ+  LP ++  L +L  L L +N L+ LP +I SL  L+ L +  N L E+P +I
Sbjct: 291 DLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESI 350

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              + L  L +  N+L  LP A+G +  LE   +  N + +LP ++ +L  L  + +  N
Sbjct: 351 SDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLDDN 410

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           +L  +PES      L ++ + NN   L  LP +IG+L  LEE+ ++ N
Sbjct: 411 QLIKLPESFSSLIQLRRLYLENN--QLTELPVAIGSLVQLEEIKLNGN 456



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/192 (38%), Positives = 109/192 (56%), Gaps = 1/192 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN + +LP+SIG L+ L  LDLS N++  +P +IG L+ L  L L  N++ ELP +I 
Sbjct: 269 LSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAIC 328

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L  L L  NQ++ +P ++S L  LE L+L  N L+ LP +IG L  L+   +  N 
Sbjct: 329 SLTDLESLRLSDNQLTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQ 388

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IG    L  + +D N+L  LPE+   +  L  L +  N + +LP  + SL  L
Sbjct: 389 LTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLVQL 448

Query: 280 RELDVSFNELES 291
            E+ ++ N L S
Sbjct: 449 EEIKLNGNPLNS 460


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/287 (37%), Positives = 168/287 (58%), Gaps = 7/287 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           EV   +   +L+L QN+L      LP+ IGKL +L  L+L++N++  +P  IG L  L++
Sbjct: 97  EVGKLQNLEELDLGQNQLTT----LPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQE 152

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N+   LP +IG L  L  LDL  NQ++ LP  + +L +L+ELDLG N L++LP  
Sbjct: 153 LYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKE 212

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L  L+ L +  N L  LP  IG+   L+ L +++N+L  LP+ +G +  L+ L +  
Sbjct: 213 IGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYS 272

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L  L+EL +S N+L SVPE +     L K+++ +N   L  +P+ IGN
Sbjct: 273 NQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSN--QLTIIPKEIGN 330

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ LEELD+  NQ+ +LP     L +L+ L +  N L   P+ I ++
Sbjct: 331 LQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKL 377



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 158/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ + +  + LNL +  + N   LP  IGKL  L +L+L+ N++  +P  IG L +L++L
Sbjct: 212 EIGNLQKLQTLNLNHNQLTN---LPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQL 268

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L++N++  LP  I  L  L  L L  NQ++++P  +  L  L++L L SN L+ +P  I
Sbjct: 269 YLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEI 328

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L  L++L +  N L  LP  IG    L+ L +  N+L ALP+ +GK+   + L +  N
Sbjct: 329 GNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRN 388

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  + +L  L+ L ++ N L ++P+ +    +L  + + +N   L  LP+ IGNL
Sbjct: 389 QLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSN--RLTTLPKEIGNL 446

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L++  NQ+  LP     L  L  L + ENPL   P  I ++
Sbjct: 447 QNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFPEEIGKL 492



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 139/258 (53%), Gaps = 25/258 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I KL  L  L LS+N++ +VP  IG L +L+KL LH+N++  +P  IG+L  L  L
Sbjct: 278 LPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEEL 337

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  +  L +L+ LDLG+N L++LP  IG L + + L +  N L  LP  I
Sbjct: 338 DLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEI 397

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ L + +N L  +P+ +G + +L+VL++  N +  LP  + +L +L+ L++  N
Sbjct: 398 GNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKN 457

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L +                         LP+ IG L  LE LD+S N +   P+    L
Sbjct: 458 QLTT-------------------------LPKEIGKLRNLESLDLSENPLTSFPEEIGKL 492

Query: 348 SRLRVLRVQENPLEVPPR 365
             L+ LR++  P  +P +
Sbjct: 493 QHLKWLRLENIPTLLPQK 510



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 135/244 (55%), Gaps = 10/244 (4%)

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           R++ +    GG S+        N++  LP  I +L +L  L L  NQ++ LP  + +L  
Sbjct: 52  RVLNLEPQEGGNSN--------NQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQN 103

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEELDLG N L++LP+ IG L +L+KL +  N L  LP  IG    L+EL +  N+   L
Sbjct: 104 LEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATL 163

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P+A+GK+  L+ L +  N +  LP  +  L  L+ELD+  N+L ++P+ +     L  +N
Sbjct: 164 PKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLN 223

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + +N   L  LP+ IG L+ L+ L++++NQ+  LP     L  L+ L +  N L   P+ 
Sbjct: 224 LNHN--QLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKE 281

Query: 367 IVEM 370
           I ++
Sbjct: 282 IEKL 285


>gi|255540519|ref|XP_002511324.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223550439|gb|EEF51926.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 519

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/241 (42%), Positives = 154/241 (63%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L+++DL   R+  LP++   +  L  LDL  NQ+  +P +++ L  L+EL+L SN L +L
Sbjct: 214 LERVDLSNRRLRFLPEAFCRISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNLLEAL 273

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PD IG L++LK L V +N LE LP +I  C SL EL V +NRL  LP  +G ++  ++ L
Sbjct: 274 PDFIGLLVNLKVLNVSSNKLESLPDSISHCRSLLELDVSFNRLTYLPTNIGYELVNVKRL 333

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S++ N I+ LPT++  + SL+ LD  FNEL+ +P S      L  + + +NF+DL+ LP 
Sbjct: 334 SIQLNKIRSLPTSIGEMRSLQHLDAHFNELQGLPLSFGRLINLEILKLSSNFSDLKELPD 393

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G+L  L+ELD+SNNQI  LPDSF  L  L  L + +NPL +PP  +V+ G +AV  +M
Sbjct: 394 TLGDLTNLKELDLSNNQIETLPDSFGRLDNLTKLNLDQNPLILPPPEVVKEGVEAVKIFM 453

Query: 380 A 380
           A
Sbjct: 454 A 454



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 137/209 (65%), Gaps = 3/209 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP++  ++S L  LDLS N++  +P +I GL +L +L+L +N +  LPD IG L++L
Sbjct: 224 LRFLPEAFCRISGLKVLDLSNNQLEVIPDSIAGLENLDELNLASNLLEALPDFIGLLVNL 283

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEEL 223
             L++  N++ +LP ++S    L ELD+  N L+ LP +IG  L+++K+L ++ N +  L
Sbjct: 284 KVLNVSSNKLESLPDSISHCRSLLELDVSFNRLTYLPTNIGYELVNVKRLSIQLNKIRSL 343

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV--LSVRYNNIKQLPTTMSSLSSLRE 281
           P +IG+  SL+ L   +N L+ LP + G++  LE+  LS  ++++K+LP T+  L++L+E
Sbjct: 344 PTSIGEMRSLQHLDAHFNELQGLPLSFGRLINLEILKLSSNFSDLKELPDTLGDLTNLKE 403

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN 310
           LD+S N++E++P+S      L K+N+  N
Sbjct: 404 LDLSNNQIETLPDSFGRLDNLTKLNLDQN 432



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L   +   + ++ LP S G+L +L  L LS N   +  +P T+G L++LK+LDL  N+
Sbjct: 351 RSLQHLDAHFNELQGLPLSFGRLINLEILKLSSNFSDLKELPDTLGDLTNLKELDLSNNQ 410

Query: 151 IIELPDSIGDLLSLVYLDLRGN 172
           I  LPDS G L +L  L+L  N
Sbjct: 411 IETLPDSFGRLDNLTKLNLDQN 432



 Score = 42.7 bits (99), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/49 (42%), Positives = 34/49 (69%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +++ LPD++G L++L  LDLS N+I  +P + G L +L KL+L  N +I
Sbjct: 387 DLKELPDTLGDLTNLKELDLSNNQIETLPDSFGRLDNLTKLNLDQNPLI 435


>gi|357142738|ref|XP_003572676.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Brachypodium distachyon]
          Length = 495

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/273 (39%), Positives = 157/273 (57%), Gaps = 5/273 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++++ L   ++  LP+  G +  L+ L++  NQ+  +P A+  L  LEEL L SN L SL
Sbjct: 198 VEQVHLADRQLHHLPEPFGRIRGLLVLNVSRNQLQTVPDAIGGLEHLEELRLASNALVSL 257

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PD+IG L +LK L V  N L  LP +I +C SL EL   YN L  LP  +G ++  L+ L
Sbjct: 258 PDTIGLLSNLKILDVSGNKLRSLPDSISKCRSLVELDASYNVLAYLPTGIGHELVNLQKL 317

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V  N ++ LP+++  + SLR LD  FNEL  +P ++     L  +N+ +NF+D+R LP 
Sbjct: 318 WVHLNKLRSLPSSVCEMRSLRLLDAHFNELRGLPAAIGKLAALESLNLSSNFSDMRDLPE 377

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S  +L  L ELD+SNNQI  LPD F  L RL +L + +NPL VPP  +V  G  AV +YM
Sbjct: 378 SFCDLVGLRELDLSNNQIHELPDRFGQLDRLELLSLDQNPLAVPPMEVVAEGVGAVKEYM 437

Query: 380 ADLV----EKRDAKTQPVKQKKSWVEMCFFSRS 408
              +    E+R    +  +  +S   M + SRS
Sbjct: 438 TKRLLAEEERRRNAVEAAESPRSSTPMAWLSRS 470


>gi|125540110|gb|EAY86505.1| hypothetical protein OsI_07885 [Oryza sativa Indica Group]
          Length = 501

 Score =  179 bits (453), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/242 (45%), Positives = 149/242 (61%), Gaps = 1/242 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           ++++L L   ++  LP+ +G +  L+ LD+  NQ+  +P A+  L  LEEL L SN L S
Sbjct: 192 AVERLLLADRQLRHLPEQLGRIRGLLVLDVSRNQLKNVPDAIGGLEHLEELRLASNALVS 251

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEV 258
           LPDSIG L SLK L V  N L  LP +I +C SL EL V YN L  LP  +G+ +  LE 
Sbjct: 252 LPDSIGLLTSLKILDVSGNKLRSLPDSISKCRSLVELDVSYNVLSYLPTGIGQEMARLEK 311

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L V  N ++ LP+++  + SLR LD  FN+L  +P  +     L  +N+ +NF+D+R LP
Sbjct: 312 LWVHLNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLP 371

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S G+L  L ELD+SNNQI  LPD F  L RL  LR+ +NPL VPP+ +V  G  AV +Y
Sbjct: 372 ASFGDLLGLRELDLSNNQIHALPDCFGRLQRLERLRLDQNPLAVPPKEVVAGGVGAVKEY 431

Query: 379 MA 380
           MA
Sbjct: 432 MA 433



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--RIIELPDSIG 159
           ++ +  LP S+ ++ SL  LD   N++  +PA IG L++L+ L+L +N   + +LP S G
Sbjct: 316 LNKLRSLPSSVCEMRSLRLLDAHFNQLRGLPAGIGRLAALESLNLSSNFSDMRDLPASFG 375

Query: 160 DLLSLVYLDLRGNQISALP 178
           DLL L  LDL  NQI ALP
Sbjct: 376 DLLGLRELDLSNNQIHALP 394


>gi|1871526|emb|CAA57523.1| leucine-rich-repeat protein [Helianthus annuus]
 gi|18857654|emb|CAA57621.1| leucine-rich-repeat protein [Helianthus annuus]
          Length = 540

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 162/278 (58%), Gaps = 9/278 (3%)

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           ++ ++++DL   R+  +P++ G L +LV LDL  N+++A+P +L+ L  LEEL+L +N  
Sbjct: 210 MNGVERIDLSRRRLPFVPEAFGKLHTLVSLDLSSNKLTAIPESLAGLTSLEELNLSANLF 269

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTL 256
            SLPD+IGSL  L+ L V  N L  LP  I +C SL EL   +N++  LP  +G  +  L
Sbjct: 270 ESLPDTIGSLQHLQFLNVSRNKLTSLPDGICKCRSLLELDASFNQITYLPANIGYGLINL 329

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           + L +  NN++ LPT++  + SL+ LDV FN L  +P S+     L  +N+G+NF D  A
Sbjct: 330 KKLIMPLNNVRSLPTSIGEMISLQVLDVHFNTLRGLPPSIGMLKKLEVLNLGSNFNDFTA 389

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP +IG+L  L ELDI NNQI+ LP +F  L  L  L V  NPL V P  +V  G +AV 
Sbjct: 390 LPETIGSLTRLRELDICNNQIQQLPITFGRLVSLTRLVVDHNPLTVSPPEVVAEGVEAVK 449

Query: 377 QYMA----DLVEKRDAKT----QPVKQKKSWVEMCFFS 406
            YM+    D++ + + +     +   Q+  W    FF 
Sbjct: 450 VYMSKRLYDMIVEEERRVMWEREEQAQQAGWFTFLFFG 487



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 45/79 (56%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
            + +  LP SIG L  L  L+L  N     A+P TIG L+ L++LD+  N+I +LP + G
Sbjct: 359 FNTLRGLPPSIGMLKKLEVLNLGSNFNDFTALPETIGSLTRLRELDICNNQIQQLPITFG 418

Query: 160 DLLSLVYLDLRGNQISALP 178
            L+SL  L +  N ++  P
Sbjct: 419 RLVSLTRLVVDHNPLTVSP 437


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  178 bits (452), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 150/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L++  N+++ +P  IG L +L+ L+L  NR+I LP  IG L  L +L
Sbjct: 215 LPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWL 274

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L RLE L L +N L SLP  IG L +LK+LI+E N LE  P  I
Sbjct: 275 YLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 334

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+ L ++YN    LP+ +G +H L  L++ +N +  LP  +  L  L  L++  N
Sbjct: 335 GTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 394

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  + + NN   L  LP+ IG L+ LE+LD+  NQ+  LP++   L
Sbjct: 395 RLATLPKEIGTLRKLQHLYLANN--QLATLPKEIGQLQNLEDLDLEYNQLATLPEAIGTL 452

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L ++ N L   P  I
Sbjct: 453 QRLEWLSLKNNQLTTLPEEI 472



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L SL L  N++  +P  I  L  LK L L  N++  LP  IG L  L  L
Sbjct: 54  LPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERL 113

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ +P  +  L  LEEL L +N L +LP  IG+L  L++L +  N L  LP  I
Sbjct: 114 YLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEI 173

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L++L V  N+L  LP+ +G +  L+ L + YN +  LP  +  L +L++L+V  N
Sbjct: 174 GTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNN 233

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ NN   L  LP+ IG L+ LE L ++NNQ+  LP     L
Sbjct: 234 QLITLPQEIGTLQNLQSLNLENN--RLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKL 291

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L +  N L+  P+ I
Sbjct: 292 QRLEWLGLANNQLKSLPQEI 311



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 150/272 (55%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L+L+ N++  +P  IG L  L+ L++  N++I LP  IG L +L YL
Sbjct: 146 LPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYL 205

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + RL  L++L++ +N L +LP  IG+L +L+ L +E N L  LP  I
Sbjct: 206 RLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEI 265

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N+L  LP+ +GK+  LE L +  N +K LP  +  L +L+EL +  N
Sbjct: 266 GTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENN 325

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LES P+ +   + L ++++   +     LP+ IG L  L  L++ +NQ+  LP     L
Sbjct: 326 RLESFPKEIGTLSNLQRLHL--EYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRL 383

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            RL  L +  N L   P+   E+G    +Q++
Sbjct: 384 ERLEWLNLYNNRLATLPK---EIGTLRKLQHL 412



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/237 (38%), Positives = 130/237 (54%), Gaps = 25/237 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L  NR+ + P  IG LS+L++L L  N    LP  IG L  L +L
Sbjct: 307 LPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWL 366

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + RL RLE L+L +N L++LP  IG+L  L+ L +  N L  LP  I
Sbjct: 367 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI 426

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L +L ++YN+L  LPEA+G +  LE LS++                        N
Sbjct: 427 GQLQNLEDLDLEYNQLATLPEAIGTLQRLEWLSLKN-----------------------N 463

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           +L ++PE +     +VK+N+ NN   LR LP+ IG L+ L++LD+S N     P   
Sbjct: 464 QLTTLPEEIGTLQKIVKLNLANN--QLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEI 518



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG L  L  L L  N+++ +P  IG L  L++L+L  N++  LP  IG L  L  L
Sbjct: 123 IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDL 182

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  NQ+  LP  +  L  L+ L L  N L++LP  IG L +L+ L V  N L  LP  I
Sbjct: 183 NVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNVFNNQLITLPQEI 242

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L ++ NRL  LP+ +G +  LE L +  N +  LP  +  L  L  L ++ N
Sbjct: 243 GTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLANN 302

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+S+P+ +     L ++ + NN   L + P+ IG L  L+ L +  N    LP     L
Sbjct: 303 QLKSLPQEIGKLQNLKELILENN--RLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTL 360

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L ++ N L   P+ I
Sbjct: 361 HRLPWLNLEHNQLTTLPQEI 380



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/235 (30%), Positives = 119/235 (50%), Gaps = 21/235 (8%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           L +++ + + +  LDL  NQ++ LP  + +L  L  L L +N L++LP  I +L  LK L
Sbjct: 31  LNEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWL 90

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IG+   L  L +  N+L  +P+ +G +  LE LS+  N +  LP  +
Sbjct: 91  YLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEI 150

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN---------------------FA 312
            +L  L EL+++ N+L ++P+ +     L  +N+ NN                     + 
Sbjct: 151 GTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYN 210

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LP+ IG LE L++L++ NNQ+  LP     L  L+ L ++ N L   P+ I
Sbjct: 211 QLTTLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEI 265



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/162 (32%), Positives = 86/162 (53%), Gaps = 5/162 (3%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L  LP  IG+  +L  L ++ N+L  LP+ +  +  L+ L +  N +  LP  +  L 
Sbjct: 49  NQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQ 108

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L  L +  N+L ++P+ +     L ++++ NN   L  LP+ IG L+ LEEL+++NNQ+
Sbjct: 109 RLERLYLGGNQLTTIPQEIGALQDLEELSLYNN--QLITLPQEIGTLQDLEELNLANNQL 166

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           R LP     L  L+ L V  N L   P+   E+G    ++Y+
Sbjct: 167 RTLPKEIGTLQHLQDLNVFNNQLITLPQ---EIGTLQNLKYL 205


>gi|12321872|gb|AAG50968.1|AC073395_10 hypothetical protein; 91861-89496 [Arabidopsis thaliana]
          Length = 537

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/291 (39%), Positives = 158/291 (54%), Gaps = 43/291 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIV-----------------AVPATIGGLSSLKKLDLHANR 150
           LP++ G++  L+ L+LS N++                  A+ A +   S L   +++  +
Sbjct: 213 LPEAFGRIQGLLVLNLSNNKLERSYMLNIRCGISFWLLPAIAADVHASSFLDSSEVYVQQ 272

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
            I  PDSI  L SLV                       ELD+ +N+L +LPDSIG L  L
Sbjct: 273 SI--PDSIAGLHSLV-----------------------ELDVSTNSLETLPDSIGLLSKL 307

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQL 269
           K L V TN L  LP +I +C SL  L V +NRL  LP  +G ++  LE L V+YN I+  
Sbjct: 308 KILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPELVNLEKLLVQYNKIRSF 367

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           PT++  + SL+ LD  FNEL  +P+S    T L  +N+ +NF+DL+ LP S G L  L+E
Sbjct: 368 PTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSDLKDLPFSFGELISLQE 427

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           LD+SNNQI  LPD+F  L  L  L V +NPL VPP  +V+ G +AV  YM 
Sbjct: 428 LDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVKTYMG 478



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 103/165 (62%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           +++E LPDSIG LS L  L++S N++ ++P +I    SL  LD+  NR+  LP +IG +L
Sbjct: 292 NSLETLPDSIGLLSKLKILNVSTNKLTSLPDSICRCGSLVILDVSFNRLTYLPTNIGPEL 351

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           ++L  L ++ N+I + P ++  +  L+ LD   N L+ LPDS   L +L+ L + +N  D
Sbjct: 352 VNLEKLLVQYNKIRSFPTSIGEMRSLKHLDAHFNELNGLPDSFVLLTNLEYLNLSSNFSD 411

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           L++LP + G+  SL+EL +  N++ ALP+  G + +L  L+V  N
Sbjct: 412 LKDLPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQN 456


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L++  N+++ +P  IG L +L+ L+L  NR++ LP  IG L  L +L
Sbjct: 12  LPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWL 71

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L RLE L L +N L  LP  IG L +LK+LI+E N LE  P  I
Sbjct: 72  YLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEI 131

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+ L ++YNR   LP+ +G +H L  L++ +N +  LP  +  L  L  L++  N
Sbjct: 132 GTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 191

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  + + NN   L  LP+ IG L+ L++LD+S+NQ+  LP+    L
Sbjct: 192 RLATLPKEIGTLQKLQHLYLANN--QLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTL 249

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL  L ++ N L   P+ I ++
Sbjct: 250 QRLEWLSLKNNQLRTLPQEIGQL 272



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 78/190 (41%), Positives = 115/190 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L  NR+ + P  IG LS+L++L L  NR   LP  IG L  L +L
Sbjct: 104 LPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWL 163

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + RL RLE L+L +N L++LP  IG+L  L+ L +  N L  LP  I
Sbjct: 164 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEI 223

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +  N+L  LPE +G +  LE LS++ N ++ LP  +  L +L++LD+S N
Sbjct: 224 GQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGN 283

Query: 288 ELESVPESLC 297
              + P+ + 
Sbjct: 284 PFTTFPQEIV 293



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/280 (31%), Positives = 134/280 (47%), Gaps = 45/280 (16%)

Query: 85  EVSSKKGTRDLNLQNK----------LMDNIEWL----------PDSIGKLSSLVSLDLS 124
           E+ + +  + LNL+N            +  +EWL          P  IGKL  L  L L+
Sbjct: 38  EIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLT 97

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  IG L +LK+L L  NR+   P  IG L +L  L L  N+ + LP  +  L
Sbjct: 98  NNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTL 157

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            RL  L+L  N L++LP  IG L  L+ L +  N L  LP  IG    L+ L +  N+L 
Sbjct: 158 HRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLA 217

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP+ +G+                       L +L++LD+S N+L ++PE +     L  
Sbjct: 218 TLPQEIGQ-----------------------LQNLKDLDLSDNQLVTLPEEIGTLQRLEW 254

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           +++ NN   LR LP+ IG L+ L++LD+S N     P   
Sbjct: 255 LSLKNN--QLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEI 292



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/214 (33%), Positives = 116/214 (54%), Gaps = 5/214 (2%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           YL L  NQ++ LP  + RL  L++L++ +N L +LP  IG+L +L+ L +E N L  LP 
Sbjct: 1   YLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPK 60

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG    L  L +  N+L  LP+ +GK+  LE L +  N ++ LP  +  L +L+EL + 
Sbjct: 61  EIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILE 120

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N LES P+ +   + L ++++   +     LP+ IG L  L  L++ +NQ+  LP    
Sbjct: 121 NNRLESFPKEIGTLSNLQRLHL--EYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIG 178

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L RL  L +  N L   P+   E+G    +Q++
Sbjct: 179 RLERLEWLNLYNNRLATLPK---EIGTLQKLQHL 209


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  178 bits (451), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/273 (37%), Positives = 165/273 (60%), Gaps = 5/273 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PDSIG L  L  LD+  N +  +P +IG L  L++LD+  N + +LPDSIG+L+ L  L
Sbjct: 37  IPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQL 96

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+  N ++ LP ++  L+ LE L++  N L+ LP++IG++  ++ L +E+N+L  LP +I
Sbjct: 97  DIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSI 156

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L +L    NRL  +PE++  +  L++L ++ N + QLP  +  L  L++LD+  N
Sbjct: 157 GGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNN 216

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +PES+   T L  ++IG  + +L  LP SI NL  L+EL I NNQ+  LP+S   L
Sbjct: 217 ELSELPESITNLTHLQMLDIG--YNELSELPESISNLTNLQELYIENNQLTQLPESITNL 274

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           + LR+L +  N L   P   + +G    +Q +A
Sbjct: 275 TNLRMLYIHNNQLSQLP---LRIGNLTHLQILA 304



 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 157/257 (61%), Gaps = 2/257 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L +++S +L+ N +  +P +IG L  L++LD+  N + +LPDSIG+L+ L  LD+R N+
Sbjct: 20  ELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDIRNNE 79

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +  LP ++  L+ L++LD+  N L+ LP+SIG+LI L+ L V  N L  LP  IG    +
Sbjct: 80  LGQLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKM 139

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R L ++ N L  LP ++G +  LE L    N + Q+P ++ +L++L+ LD+  NEL  +P
Sbjct: 140 RSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLP 199

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + +     L K++IGNN  +L  LP SI NL  L+ LDI  N++  LP+S   L+ L+ L
Sbjct: 200 KHIGKLRKLKKLDIGNN--ELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQEL 257

Query: 354 RVQENPLEVPPRNIVEM 370
            ++ N L   P +I  +
Sbjct: 258 YIENNQLTQLPESITNL 274



 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 159/252 (63%), Gaps = 2/252 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++IG +  + SL +  N +  +P +IGGL +L++L   +NR+ ++P+SI +L +L  L
Sbjct: 129 LPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQML 188

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D++ N+++ LP  + +L +L++LD+G+N LS LP+SI +L  L+ L +  N+L ELP +I
Sbjct: 189 DIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESITNLTHLQMLDIGYNELSELPESI 248

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++L+EL ++ N+L  LPE++  +  L +L +  N + QLP  + +L+ L+ L ++ N
Sbjct: 249 SNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANN 308

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +PE +   T L K+ I NN   L  LP  IGNL  L+ LDI NNQ+  +P+S   L
Sbjct: 309 KLSELPERISNLTNLQKLYIQNN--QLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNL 366

Query: 348 SRLRVLRVQENP 359
           + L  L +  NP
Sbjct: 367 TNLETLVLTNNP 378



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 147/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIG L  L  L+++ NR+  +P  IG +  ++ L + +N +  LP SIG L +L  L
Sbjct: 106 LPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIGGLQNLEQL 165

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
               N++S +P ++  L  L+ LD+  N L+ LP  IG L  LKKL +  N+L ELP +I
Sbjct: 166 FTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELSELPESI 225

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              + L+ L + YN L  LPE++  +  L+ L +  N + QLP ++++L++LR L +  N
Sbjct: 226 TNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPESITNLTNLRMLYIHNN 285

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P  +   T L  + I NN   L  LP  I NL  L++L I NNQ+  LP     L
Sbjct: 286 QLSQLPLRIGNLTHLQILAIANN--KLSELPERISNLTNLQKLYIQNNQLTRLPLRIGNL 343

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + L+VL ++ N L   P +I
Sbjct: 344 TNLKVLDIKNNQLTQIPESI 363



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/160 (31%), Positives = 92/160 (57%), Gaps = 3/160 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ   ++N  +  LP+SI  L++L  L +  N++  +P  IG L+ L+ L +  N++ E
Sbjct: 253 NLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSE 312

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+ I +L +L  L ++ NQ++ LP+ +  L  L+ LD+ +N L+ +P+SI +L +L+ L
Sbjct: 313 LPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLETL 372

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           ++  N    +P  + Q  ++R +  D N +   P  V  +
Sbjct: 373 VLTNNPNLFIPDWLRQM-NIRFIHYDVNNVDVNPFEVHDV 411


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  178 bits (451), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 151/260 (58%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L++  N++V +P  IG L +L+ L+L  NR++ LP  IG L  L +L
Sbjct: 214 LPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWL 273

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L RLE L L +N L SLP  IG L +LK+LI+E N LE  P  I
Sbjct: 274 YLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 333

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L ++YNR   LP+ +G +H L  L++ +N +  LP  +  L  L  L++  N
Sbjct: 334 GTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 393

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  + + NN   L  LP+ IG L+ L++LD+  NQ+  LP++   L
Sbjct: 394 RLATLPKEIGTLQKLQHLYLANN--QLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTL 451

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L ++ N L   P  I
Sbjct: 452 QRLEWLSLKNNQLTTLPEEI 471



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 140/252 (55%), Gaps = 25/252 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L  NR+ + P  IG L +L++L L  NR   LP  IG L  L +L
Sbjct: 306 LPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWL 365

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + RL RLE L+L +N L++LP  IG+L  L+ L +  N L  LP  I
Sbjct: 366 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEI 425

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L ++YN+L  LPEA+G +  LE LS++ N                       
Sbjct: 426 GQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN----------------------- 462

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     +VK+N+ NN   LR LP+ IG L+ L++LD+S N     P     L
Sbjct: 463 QLTTLPEEIGTLQKIVKLNLANN--QLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGL 520

Query: 348 SRLRVLRVQENP 359
             L++L+++  P
Sbjct: 521 KHLQILKLKNIP 532



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L+L+ N++  +P  IG L  L+ L++  N++I LP  IG L +L YL
Sbjct: 145 LPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYL 204

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + RL  L++L++ +N L +LP  IG+L +L+ L +E N L  LP  I
Sbjct: 205 RLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEI 264

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N+L  LP+ +GK+  LE L +  N +K LP  +  L +L+EL +  N
Sbjct: 265 GALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENN 324

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LES P+ +     L ++++   +     LP+ IG L  L  L++ +NQ+  LP     L
Sbjct: 325 RLESFPKEIGTLPNLQRLHL--EYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRL 382

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            RL  L +  N L   P+   E+G    +Q++
Sbjct: 383 ERLEWLNLYNNRLATLPK---EIGTLQKLQHL 411



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 142/260 (54%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  IG L +L  L L+ N++  +P  I  L  LK L L  N++  LP  IG L  L  L
Sbjct: 53  FPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ +P  +  L  LEEL L +N L +LP  IG+L  L++L +  N L  LP  I
Sbjct: 113 YLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L++L V  N+L  LP+ +G +  L+ L + YN +  LP  +  L +L++L+V  N
Sbjct: 173 GTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ NN   L  LP+ IG L+ LE L ++NNQ+  LP     L
Sbjct: 233 QLVTLPQEIGTLQNLQSLNLENN--RLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L +  N L+  P+ I
Sbjct: 291 QRLEWLGLTNNQLKSLPQEI 310



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG L  L  L L  N+++ +P  IG L  L++L+L  N++  LP  IG L  L  L
Sbjct: 122 IPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDL 181

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  NQ+  LP  +  L  L+ L L  N L++LP+ IG L +L+ L V  N L  LP  I
Sbjct: 182 NVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEI 241

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L ++ NRL  LP+ +G +  LE L +  N +  LP  +  L  L  L ++ N
Sbjct: 242 GTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNN 301

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+S+P+ +     L ++ + NN   L + P+ IG L  L+ L +  N+   LP     L
Sbjct: 302 QLKSLPQEIGKLQNLKELILENN--RLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTL 359

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L ++ N L   P+ I
Sbjct: 360 HRLPWLNLEHNQLTTLPQEI 379



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 130/240 (54%), Gaps = 5/240 (2%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++ LDL  N++   P  IG L +L YL L  NQ+  LP  +  L +L+ L L  N L++
Sbjct: 39  DVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLAT 98

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG L  L++L +  N L  +P  IG    L EL +  N+L  LP+ +G +  LE L
Sbjct: 99  LPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEEL 158

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++  N ++ LP  + +L  L++L+V  N+L ++P+ +     L  + +   +  L  LP 
Sbjct: 159 NLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLA--YNQLTTLPE 216

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG LE L++L++ NNQ+  LP     L  L+ L ++ N L   P+   E+GA   ++++
Sbjct: 217 EIGRLENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPK---EIGALQKLEWL 273



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 65/188 (34%), Positives = 102/188 (54%), Gaps = 2/188 (1%)

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           AL   + +  LDL +N L+  P  IG+L +LK L +  N L+ LP  I     L+ L + 
Sbjct: 33  ALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLS 92

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L  LP+ +GK+  LE L +  N +  +P  + +L  L EL +  N+L ++P+ +   
Sbjct: 93  ENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTL 152

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L ++N+ NN   LR LP+ IG L+ L++L++ NNQ+  LP     L  L+ LR+  N 
Sbjct: 153 QDLEELNLANN--QLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQ 210

Query: 360 LEVPPRNI 367
           L   P  I
Sbjct: 211 LTTLPEEI 218



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 94/178 (52%), Gaps = 5/178 (2%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++ + + ++ L +  N L   P  IG   +L+ L +  N+LK LP+ +  +  L+ L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +  LP  +  L  L  L +  N+L ++P+ +     L ++++ NN   L  LP+ I
Sbjct: 92  SENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNN--QLITLPQEI 149

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           G L+ LEEL+++NNQ+R LP     L  L+ L V  N L   P+   E+G    ++Y+
Sbjct: 150 GTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQ---EIGTLQNLKYL 204


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 154/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L++  N+++ +P  IG L +L+ L+L  NR++ LP  IG L  L +L
Sbjct: 214 LPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWL 273

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +LE L L +N L SLP  IG L +LK+LI+E N LE  P  I
Sbjct: 274 YLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 333

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+ L ++YNR   LPE +G +H L  L++ +N +  LP  +  L  L  L++  N
Sbjct: 334 GTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNN 393

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  + + NN   L  LP+ IG L+ L++LD+S+NQ+  LP+    L
Sbjct: 394 RLATLPKEIGTLRKLQHLYLANN--QLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTL 451

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL  L ++ N L    + I ++
Sbjct: 452 QRLEWLSLKNNQLRTLSQEIGQL 474



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 160/283 (56%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ + +  + L+L N   + ++ LP  I  L  L  L LSEN++  +P  IG L +L+ L
Sbjct: 56  EIGTLQNLKYLSLAN---NQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVL 112

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L SL  L L  NQ+  LP  +  L  LEEL+L +N L  L   I
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEI 172

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L  L+ L V  N L  LP  IG+  +L+ LR+ YN+L  LP+ +G++  L+ L++  N
Sbjct: 173 GTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNN 232

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  + +L +L+ L+++ N L ++P+ +     L  + + NN   L  LP+ IG L
Sbjct: 233 QLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNN--QLATLPQEIGKL 290

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + LE L ++NNQ++ LP     L  L+ L ++ N LE  P+ I
Sbjct: 291 QKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEI 333



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 146/272 (53%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L+L+ N++  +   IG L  L+ L +  N++I LP  IG L +L YL
Sbjct: 145 LPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYL 204

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + RL  L++L++ +N L +LP  IG+L +L+ L +  N L  LP  I
Sbjct: 205 RLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEI 264

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N+L  LP+ +GK+  LE L +  N +K LP  +  L +L+EL +  N
Sbjct: 265 GTLQKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENN 324

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LES P+ +   + L ++++   +     LP  IG L  L  L++ +NQ+  LP     L
Sbjct: 325 RLESFPKEIGTLSNLQRLHL--EYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRL 382

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            RL  L +  N L   P+   E+G    +Q++
Sbjct: 383 ERLEWLNLYNNRLATLPK---EIGTLRKLQHL 411



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  IG L +L  L L+ N++  +P  I  L  LK L L  N++  LP  IG L +L  L
Sbjct: 53  FPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+  LP  + +L  LE L L  N L +LP  IG+L  L++L +  N L  L   I
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILSKEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L++L V  N+L  LP+ +GK+  L+ L + YN +  LP  +  L +L++L++  N
Sbjct: 173 GTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ NN   L  LP+ IG L+ LE L ++NNQ+  LP     L
Sbjct: 233 QLITLPQEIGTLQNLQSLNLANN--RLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L  L +  N L+  P+ I
Sbjct: 291 QKLEWLGLTNNQLKSLPQEI 310



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 115/190 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L  NR+ + P  IG LS+L++L L  NR   LP+ IG L  L +L
Sbjct: 306 LPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPEEIGTLHRLPWL 365

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + RL RLE L+L +N L++LP  IG+L  L+ L +  N L  LP  I
Sbjct: 366 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEI 425

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +  N+L  LPE +G +  LE LS++ N ++ L   +  L +L++LD+S N
Sbjct: 426 GQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRTLSQEIGQLQNLKDLDLSGN 485

Query: 288 ELESVPESLC 297
              + P+ + 
Sbjct: 486 PFTTFPQEIV 495



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 124/227 (54%), Gaps = 2/227 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++ LDL  N++   P  IG L +L YL L  NQ+  LP  +  L +L+ L L  N L +L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  IG+L +L+ L +  N L  LP  IG+  SL  L +++N+L  LP+ +G +  LE L+
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTLQDLEELN 159

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N ++ L   + +L  L++L V  N+L ++P+ +     L  + +   +  L  LP+ 
Sbjct: 160 LANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLA--YNQLTTLPKE 217

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           IG LE L++L+I NNQ+  LP     L  L+ L +  N L   P+ I
Sbjct: 218 IGRLENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEI 264



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 103/188 (54%), Gaps = 2/188 (1%)

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           AL   + +  LDL +N L+  P  IG+L +LK L +  N L+ LP  I     L+ L + 
Sbjct: 33  ALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLS 92

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+LK LP+ +G +  LEVL +  N ++ LP+ +  L SL  L +  N+L ++P+ +   
Sbjct: 93  ENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQEIGTL 152

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L ++N+ NN   LR L + IG L+ L++L + NNQ+  LP     L  L+ LR+  N 
Sbjct: 153 QDLEELNLANN--QLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQ 210

Query: 360 LEVPPRNI 367
           L   P+ I
Sbjct: 211 LTTLPKEI 218



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 98/178 (55%), Gaps = 5/178 (2%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++ + + ++ L +  N L   P  IG   +L+ L +  N+LK LP+ +  +  L+ L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +K LP  + +L +L  LD+  N+L ++P  +    +L ++++ +N   L  LP+ I
Sbjct: 92  SENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHN--QLITLPQEI 149

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           G L+ LEEL+++NNQ+R+L      L  L+ L V  N L   P+   E+G    ++Y+
Sbjct: 150 GTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQ---EIGKLQNLKYL 204


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  177 bits (448), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/287 (36%), Positives = 173/287 (60%), Gaps = 6/287 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  +DL+L++   + +  LP+ IGKL +L  LDLS N++  +P  IG L +L++L
Sbjct: 146 EIGYLKELQDLDLRD---NQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLREL 202

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L  L  LDLR NQ++ LP  + +L  L++LDL  N L +LP  I
Sbjct: 203 DLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEI 262

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE-VLSVRY 263
           G L +L++L +  N L+ LP  IG    L+ L +  N+L  LP+ +G++  L+ +L +  
Sbjct: 263 GKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGD 322

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K LP  +  L  L+ LD+S N+L+++P+ +     L  + + +N   L+ LP+ IG 
Sbjct: 323 NQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSN--QLKTLPKDIGK 380

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L++SNNQ++ LP     L +LRVL +  N L+  P+ I ++
Sbjct: 381 LQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQL 427



 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/287 (36%), Positives = 171/287 (59%), Gaps = 6/287 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  +DL+L++   + +  LP+ IGKL +L  LDLS N++  +P  IG L +L++L
Sbjct: 215 EIGYLKELQDLDLRD---NQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQEL 271

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL-DLGSNNLSSLPDS 203
            L+ N++  LP  IG L  L  L L  N+++ LP  + +L +L+ L  LG N L +LP  
Sbjct: 272 YLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKD 331

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L  L+ L +  N L+ LP  IGQ   L++L +D N+LK LP+ +GK+  L+VL++  
Sbjct: 332 IGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSN 391

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K LP  +  L  LR L++  N+L+++P+ +     L ++N+ +N   L  LP+ I  
Sbjct: 392 NQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHN--KLTTLPKDIEK 449

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L+++NNQ++ LP     L  L+VL +  N L   P++I ++
Sbjct: 450 LQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKL 496



 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 164/276 (59%), Gaps = 3/276 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IG L  L  LDL +N++  +P  IG L +L+KLDL  N++  LP  IG L 
Sbjct: 138 NQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQ 197

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  NQ+  LP  +  L  L++LDL  N L++LP+ IG L +L+KL +  N L+ 
Sbjct: 198 NLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKT 257

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L+EL +  N+LK LP+ +G +  L+VL +  N +  LP  +  L  L+ L
Sbjct: 258 LPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQAL 317

Query: 283 -DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
             +  N+L+++P+ + +   L  +++  N   L+ LP+ IG L+ L++L++ +NQ++ LP
Sbjct: 318 LHLGDNQLKTLPKDIGYLKELQLLDLSGN--QLKTLPKDIGQLQKLQDLELDSNQLKTLP 375

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
                L  L+VL +  N L+  P++I ++    V++
Sbjct: 376 KDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLE 411



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/277 (37%), Positives = 163/277 (58%), Gaps = 5/277 (1%)

Query: 97  LQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LQ   +DN  ++ LP  IGKL +L  L L+ N++  +P  IG L  L+ LDL  N++  L
Sbjct: 107 LQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTL 166

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ IG L +L  LDL GNQ+  LP  + +L  L ELDL  N L +LP  IG L  L+ L 
Sbjct: 167 PNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLD 226

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  LP+ IG+  +L++L +  N+LK LP+ +GK+  L+ L +  N +K LP  + 
Sbjct: 227 LRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIG 286

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVK-MNIGNNFADLRALPRSIGNLEMLEELDIS 333
            L  L+ L +S N+L ++P+ +     L   +++G+N   L+ LP+ IG L+ L+ LD+S
Sbjct: 287 YLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDN--QLKTLPKDIGYLKELQLLDLS 344

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NQ++ LP     L +L+ L +  N L+  P++I ++
Sbjct: 345 GNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKL 381



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/290 (34%), Positives = 159/290 (54%), Gaps = 22/290 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IGKL +L  LDL++N++  +P  IG L  L+ LDL  N++  LP+ IG L 
Sbjct: 184 NQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQ 243

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL GNQ+  LP  + +L  L+EL L  N L +LP  IG L  L+ L +  N L  
Sbjct: 244 NLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKEIGYLKELQVLHLSDNKLTT 303

Query: 223 LPHTIGQCSSLREL-RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           LP  IGQ   L+ L  +  N+LK LP+ +G +  L++L +  N +K LP  +  L  L++
Sbjct: 304 LPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQD 363

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNF---------------------ADLRALPRS 320
           L++  N+L+++P+ +     L  +N+ NN                        L+ LP+ 
Sbjct: 364 LELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKE 423

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           IG L+ L+EL++S+N++  LP     L  L+VL +  N L+  P+ I ++
Sbjct: 424 IGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQL 473



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 154/266 (57%), Gaps = 3/266 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL-DLHANRIIELPDSIGDL 161
           + ++ LP  IG L  L  L LS+N++  +P  IG L  L+ L  L  N++  LP  IG L
Sbjct: 276 NQLKTLPKEIGYLKELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYL 335

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDL GNQ+  LP  + +L +L++L+L SN L +LP  IG L +L+ L +  N L+
Sbjct: 336 KELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLK 395

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   LR L +  N+LK LP+ +G++  L+ L++ +N +  LP  +  L +L+ 
Sbjct: 396 TLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQV 455

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L+++ N+L+++P+ +     L  +N+ +N   L  LP+ IG L+ L+EL ++NNQ+  LP
Sbjct: 456 LNLTNNQLKTLPKEIGQLQNLQVLNLSHN--KLTTLPKDIGKLQNLQELYLTNNQLTTLP 513

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNI 367
                L  L+ L +  N L   P+ I
Sbjct: 514 KDIEKLQNLQELYLTNNQLTTLPKEI 539



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 150/261 (57%), Gaps = 4/261 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSL-DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           L DN +  LP  IG+L  L +L  L +N++  +P  IG L  L+ LDL  N++  LP  I
Sbjct: 296 LSDNKLTTLPKEIGQLQKLQALLHLGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDI 355

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L  L  L+L  NQ+  LP  + +L  L+ L+L +N L +LP  IG L  L+ L +  N
Sbjct: 356 GQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNN 415

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L+ LP  IGQ   L+EL + +N+L  LP+ + K+  L+VL++  N +K LP  +  L +
Sbjct: 416 QLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQN 475

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+ L++S N+L ++P+ +     L ++ + NN   L  LP+ I  L+ L+EL ++NNQ+ 
Sbjct: 476 LQVLNLSHNKLTTLPKDIGKLQNLQELYLTNN--QLTTLPKDIEKLQNLQELYLTNNQLT 533

Query: 339 VLPDSFRMLSRLRVLRVQENP 359
            LP   R L  L VL + + P
Sbjct: 534 TLPKEIRYLKGLEVLHLDDIP 554



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/235 (34%), Positives = 137/235 (58%), Gaps = 9/235 (3%)

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           LS LK  +   +R   L +++ +   + YLDL  NQ++ LP  + +L  L++L+L +N L
Sbjct: 15  LSQLKAEETKTHR--NLTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQL 72

Query: 198 SSLPDSIGSLISLKKLIVETNDLE--ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           +++P  IG L  L++L +  N L    LP+ IGQ   L++L +D N+LK LP+ +GK+  
Sbjct: 73  TTIPKEIGYLKELQELNLSRNQLTTLTLPNKIGQ---LQKLYLDNNQLKTLPKEIGKLQN 129

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ L +  N +K LP  +  L  L++LD+  N+L ++P  +     L K+++  N   L+
Sbjct: 130 LQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGN--QLK 187

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP+ IG L+ L ELD+++NQ++ LP     L  L+ L +++N L   P  I ++
Sbjct: 188 TLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQDLDLRDNQLTTLPNEIGKL 242


>gi|357164161|ref|XP_003579968.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Brachypodium
           distachyon]
          Length = 505

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 101/228 (44%), Positives = 142/228 (62%), Gaps = 1/228 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP++ G +  L  LD+  NQ+  +P A+ RL  LEEL L SN L SLPDS+G L +LK L
Sbjct: 212 LPEAFGRIQGLRVLDVSHNQLEVIPDAIGRLDHLEELLLASNALVSLPDSVGLLSNLKIL 271

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTT 272
            V +N L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++  P++
Sbjct: 272 NVSSNKLRTLPDSISKCRSLVELDASYNGLTYLPTNIGYELVNLRKLWVHMNKLRSFPSS 331

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+D++ LP S G+L  L ELD+
Sbjct: 332 ICEMQSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDMKELPFSFGDLLKLRELDL 391

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           SNNQI  LPDSF  L RL  L +++NPL +PP +IV  G  AV +YM+
Sbjct: 392 SNNQIHALPDSFGRLDRLEKLNLEQNPLAMPPSDIVNKGVDAVKEYMS 439


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  176 bits (447), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/283 (36%), Positives = 159/283 (56%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ + +   +LNL N   + +  LP  IG L  L  L++  N+++ +P  IG L +L+ L
Sbjct: 148 EIGTLQDLEELNLAN---NQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSL 204

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR++ LP  IG L  L +L L  NQ++ LP  + +L +LE L L +N L SLP  I
Sbjct: 205 NLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEI 264

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK+LI+E N LE  P  IG   +L+ L ++YNR   LP+ +G +H L  L++ +N
Sbjct: 265 GKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHN 324

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L  L  L++  N L ++P+ +     L  + + NN   L  LP+ IG L
Sbjct: 325 QLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANN--QLATLPKEIGQL 382

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L++LD+  NQ+  LP++   L RL  L ++ N L   P  I
Sbjct: 383 QNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEI 425



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 140/252 (55%), Gaps = 25/252 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L  NR+ + P  IG L +L++L L  NR   LP  IG L  L +L
Sbjct: 260 LPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWL 319

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + RL RLE L+L +N L++LP  IG+L  L+ L +  N L  LP  I
Sbjct: 320 NLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEI 379

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L ++YN+L  LPEA+G +  LE LS++ N                       
Sbjct: 380 GQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNN----------------------- 416

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     +VK+N+ NN   LR LP+ IG L+ L++LD+S N     P     L
Sbjct: 417 QLTTLPEEIGTLQKIVKLNLANN--QLRTLPQGIGQLQSLKDLDLSGNPFTTFPKEIVGL 474

Query: 348 SRLRVLRVQENP 359
             L++L+++  P
Sbjct: 475 KHLQMLKLKNIP 486



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 149/272 (54%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L +L  LDL +N++  +P+ IG L SLK+L L  N++I LP  IG L  L  L
Sbjct: 99  LPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEEL 158

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  LP  +  L  L++L++ +N L +LP  IG+L +L+ L +E N L  LP  I
Sbjct: 159 NLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEI 218

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N+L  LP+ +GK+  LE L +  N +K LP  +  L +L+EL +  N
Sbjct: 219 GALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENN 278

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LES P+ +     L ++++   +     LP+ IG L  L  L++ +NQ+  LP     L
Sbjct: 279 RLESFPKEIGTLPNLQRLHL--EYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRL 336

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            RL  L +  N L   P+   E+G    +Q++
Sbjct: 337 ERLEWLNLYNNRLATLPK---EIGTLQKLQHL 365



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 136/248 (54%), Gaps = 2/248 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDL  N++   P  IG L +LK L L  N++  LP  I  L  L +L L  NQ+  LP 
Sbjct: 42  NLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPK 101

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            +  L  LE LDL  N L +LP  IG L SLK+L +E N L  LP  IG    L EL + 
Sbjct: 102 EIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLA 161

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L+ LP+ +G +  L+ L+V  N +  LP  + +L +L+ L++  N L ++P+ +   
Sbjct: 162 NNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGAL 221

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + NN   L  LP+ IG L+ LE L ++NNQ++ LP     L  L+ L ++ N 
Sbjct: 222 QKLEWLYLTNN--QLATLPKEIGKLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNR 279

Query: 360 LEVPPRNI 367
           LE  P+ I
Sbjct: 280 LESFPKEI 287



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  IG L +L  L L+ N++  +P  I  L  LK L L  N++  LP  IG L +L  L
Sbjct: 53  FPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+  LP  + +L  L+ L L  N L +LP  IG+L  L++L +  N L  LP  I
Sbjct: 113 DLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L++L V  N+L  LP+ +G +  L+ L++  N +  LP  + +L  L  L ++ N
Sbjct: 173 GTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L++LP+ IG L+ L+EL + NN++   P     L
Sbjct: 233 QLATLPKEIGKLQKLEWLGLTNN--QLKSLPQEIGKLQNLKELILENNRLESFPKEIGTL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L ++ N     P+ I
Sbjct: 291 PNLQRLHLEYNRFTTLPQEI 310



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 129/228 (56%), Gaps = 2/228 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++ LDL  N++   P  IG L +L YL L  NQ+  LP  +  L +L+ L L  N L +
Sbjct: 39  DVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKT 98

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG+L +L+ L +  N L  LP  IG+  SL+ L +++N+L  LP+ +G +  LE L
Sbjct: 99  LPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEEL 158

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++  N ++ LP  + +L  L++L+V  N+L ++P+ +     L  +N+ NN   L  LP+
Sbjct: 159 NLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENN--RLVTLPK 216

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            IG L+ LE L ++NNQ+  LP     L +L  L +  N L+  P+ I
Sbjct: 217 EIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQLKSLPQEI 264



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/200 (34%), Positives = 113/200 (56%), Gaps = 5/200 (2%)

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           AL   + +  LDL +N L+  P  IG+L +LK L +  N L+ LP  I     L+ L + 
Sbjct: 33  ALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLS 92

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+LK LP+ +G +  LEVL +  N ++ LP+ +  L SL+ L +  N+L ++P+ +   
Sbjct: 93  ENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTL 152

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L ++N+ NN   LR LP+ IG L+ L++L++ NNQ+  LP     L  L+ L ++ N 
Sbjct: 153 QDLEELNLANN--QLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNR 210

Query: 360 LEVPPRNIVEMGAQAVVQYM 379
           L   P+   E+GA   ++++
Sbjct: 211 LVTLPK---EIGALQKLEWL 227



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 93/166 (56%), Gaps = 2/166 (1%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++ + + ++ L +  N L   P  IG   +L+ L +  N+LK LP+ +  +  L+ L +
Sbjct: 32  EALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYL 91

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +K LP  + +L +L  LD+  N+L ++P  +    +L ++++ +N   L  LP+ I
Sbjct: 92  SENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHN--QLITLPQEI 149

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           G L+ LEEL+++NNQ+R+LP     L  L+ L V  N L   P+ I
Sbjct: 150 GTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEI 195


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/265 (40%), Positives = 160/265 (60%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SL  L L  NR+ +VPA IG L+SL+KLDL  N++  +P  IG L SL  L
Sbjct: 406 LPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTEL 465

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  +++L  L EL   ++ L+S+P  IG L SL+K  +  N+L  +P  I
Sbjct: 466 YLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEI 525

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++LRELR+D NRL +LP  +G++ +L+ L +  N +  LP  +  L+SL EL +  N
Sbjct: 526 GQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGN 585

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L SVP  +   T+L K+++ +N   L ++P  IG L  L EL ++ NQ+  +P     L
Sbjct: 586 RLTSVPAEIGQLTSLEKLDLSDN--QLTSVPTEIGQLTSLTELYLNGNQLTSVPTEIAQL 643

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           S L  L +  N L+  P  I E+ A
Sbjct: 644 SLLEQLWLSGNRLKSVPAAIRELRA 668



 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 158/265 (59%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L  N++ +VPA I  L+SL++L  + +++  +P  IG L SL   
Sbjct: 291 VPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKW 350

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++++P  + +L  L EL L  N L+SLP  IG L SLKKL++  N L  LP  I
Sbjct: 351 DLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADI 410

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL ELR+D NRL ++P  +G++ +LE L +  N +  +PT +  L+SL EL ++ N
Sbjct: 411 GQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGN 470

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L ++   N  + L ++P  IG L  LE+ D+  N++  +P     L
Sbjct: 471 QLTSVPAEIAQLTSLRELGFYN--SQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQL 528

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           + LR LR+  N L   P  I ++ +
Sbjct: 529 TALRELRLDGNRLTSLPAEIGQLAS 553



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+S+V L L++N++ ++PA IG L+SL++L L  NR+  +P  IG L SL  L
Sbjct: 199 VPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTEL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++++P  + +L  L+ L LG N L+S+P  IG L SL++L +  N L  +P  I
Sbjct: 259 NLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q +SLREL    ++L ++P  +G++ +LE   +  N +  +P  +  L++LREL +  N
Sbjct: 319 AQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGN 378

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +    +L K+ +G N   L +LP  IG L  L EL +  N++  +P     L
Sbjct: 379 RLTSLPAEIGQLASLKKLLLGCN--QLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQL 436

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L + +N L   P  I ++
Sbjct: 437 TSLEKLDLSDNQLTSVPTEIGQL 459



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L++L  L L  NR+ ++PA IG L+SLKKL L  N++  LP  IG L SL  L
Sbjct: 360 VPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWEL 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN+++++P  + +L  LE+LDL  N L+S+P  IG L SL +L +  N L  +P  I
Sbjct: 420 RLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAEI 479

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q +SLREL    ++L ++P  +G++ +LE   +  N +  +P  +  L++LREL +  N
Sbjct: 480 AQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGN 539

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +    +L K+ +G N   L +LP  IG L  L EL +  N++  +P     L
Sbjct: 540 RLTSLPAEIGQLASLKKLLLGCN--QLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQL 597

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L + +N L   P  I ++
Sbjct: 598 TSLEKLDLSDNQLTSVPTEIGQL 620


>gi|413937564|gb|AFW72115.1| hypothetical protein ZEAMMB73_054835 [Zea mays]
          Length = 529

 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/299 (38%), Positives = 163/299 (54%), Gaps = 28/299 (9%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           L +    K    +NL ++ M     LP+ IG++  L++LD+S N++              
Sbjct: 190 LKDAGEGKVVERVNLADRQM---RLLPEPIGRIRGLLALDVSRNQL-------------- 232

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           K    AN           L      D+       +P A+  L  LEEL L SN+L SLPD
Sbjct: 233 KFSSRAN----------SLFGAFNSDVPCLNSQVIPDAIGGLEHLEELRLASNDLVSLPD 282

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSV 261
           SIG L +LK L V  N L  LP TI +C SL EL   YN L  LP  +G ++  L++L V
Sbjct: 283 SIGLLSNLKILDVSGNRLRVLPDTISKCRSLVELDASYNALAYLPTGIGHELVDLQILRV 342

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N ++ LP+++  + SLR LD  FNEL  +P ++   + L  +++ +NF+D+R LP S 
Sbjct: 343 HLNKLRSLPSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALETLDLSSNFSDMRDLPPSF 402

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           G+L  L ELD+SNNQIR LPD F  L++L  LR+ +NPL VPP  +V  G  AV +YMA
Sbjct: 403 GDLAGLRELDLSNNQIRALPDCFGRLAKLERLRLDQNPLAVPPPEVVADGVVAVNEYMA 461



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 48/131 (36%), Positives = 63/131 (48%), Gaps = 23/131 (17%)

Query: 74  KLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           ++ L KL SL   SS    R L L +   + +  LP +IG+LS+L +LDLS N       
Sbjct: 341 RVHLNKLRSL--PSSVCEMRSLRLLDAHFNELHGLPAAIGQLSALETLDLSSN------- 391

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
                S ++          +LP S GDL  L  LDL  NQI ALP    RL +LE L L 
Sbjct: 392 ----FSDMR----------DLPPSFGDLAGLRELDLSNNQIRALPDCFGRLAKLERLRLD 437

Query: 194 SNNLSSLPDSI 204
            N L+  P  +
Sbjct: 438 QNPLAVPPPEV 448


>gi|148909879|gb|ABR18026.1| unknown [Picea sitchensis]
          Length = 524

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/241 (43%), Positives = 148/241 (61%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L +++L +  +   P+    + +LV ++L  N+I A+  +++ LV LE LDL  N L SL
Sbjct: 216 LDRVELTSRNLKHFPEGFCKITTLVLVNLSRNKIQAVTDSIAGLVNLETLDLSGNVLVSL 275

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  LK L +  N L+ LP +I  CS L EL   YN+L  LP   G ++  L+ L
Sbjct: 276 PDSIGLLKRLKFLNISGNKLKSLPDSISMCSELIELDASYNQLTYLPTNFGYQLANLQKL 335

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V+ N ++ LP+++  L SLR LDV FNEL S+PE+L     L  +N  +NF+DL +LP 
Sbjct: 336 LVQLNKLRSLPSSVCELKSLRYLDVHFNELRSLPEALGDLKNLEVLNASSNFSDLVSLPD 395

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           SIG L  L ELD+SNNQI+ LP SF  L  L+ L + +NPL  PP  IV  G +AV ++M
Sbjct: 396 SIGELTNLVELDVSNNQIKELPYSFGSLQNLKKLNLDQNPLMTPPNEIVVQGVEAVKEHM 455

Query: 380 A 380
           A
Sbjct: 456 A 456



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/51 (49%), Positives = 37/51 (72%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           LPDSIG+L++LV LD+S N+I  +P + G L +LKKL+L  N ++  P+ I
Sbjct: 393 LPDSIGELTNLVELDVSNNQIKELPYSFGSLQNLKKLNLDQNPLMTPPNEI 443



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP+++G L +L  L+ S N   +V++P +IG L++L +LD+  N+I ELP S G L +L 
Sbjct: 368 LPEALGDLKNLEVLNASSNFSDLVSLPDSIGELTNLVELDVSNNQIKELPYSFGSLQNLK 427

Query: 166 YLDLRGNQISALP 178
            L+L  N +   P
Sbjct: 428 KLNLDQNPLMTPP 440


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  175 bits (444), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/325 (34%), Positives = 176/325 (54%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL  Q      +
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLRYQK-----L 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IG+L +L  LDLS N +  +P  +G L +L++LDLH NR+  LP  IG L +L 
Sbjct: 61  TILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LDL  N+++ LP  + +L  L+ELDL  N L++LP  IG L +LK L +    L  LP 
Sbjct: 121 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N I  LP  +  L +L+ LD+ 
Sbjct: 181 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLH 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +     L ++++  N   L  LP+ IG L+ L+ LD+  NQ+  LP    
Sbjct: 241 QNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L + EN L   P+ I ++
Sbjct: 299 QLQNLQELCLDENQLTTLPKEIEQL 323



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 155/276 (56%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL   ++  +  LP  IG+L +L +L+L +N++  +P  IG L +L+ L
Sbjct: 158 EIGQLQNLKTLNL---IVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEIL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NRI  LP  IG L +L +LDL  NQ++ LP  + +L  L+ LDL  N L++LP  I
Sbjct: 215 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N
Sbjct: 275 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L SL+ L +  N L ++P+ +     L  + + +N   L  LP+ IG L
Sbjct: 335 QLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPKEIGQL 392

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+EL +  NQ+   P   R L  L+ L +  NPL
Sbjct: 393 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 162/288 (56%), Gaps = 3/288 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 150 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L++LP  IG L +L++L +  N L  
Sbjct: 210 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  +  L +LR L
Sbjct: 270 LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L ++P+ +    +L  + +G+N   L  LP+ IG L+ L+ L + +NQ+  LP 
Sbjct: 330 DLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPKEIGQLQNLQVLGLISNQLTTLPK 387

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVVQYMADLVEKRDAK 389
               L  L+ L + EN L   P+ I ++   Q +  Y+  L  K   +
Sbjct: 388 EIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKR 435



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 106/343 (30%), Positives = 183/343 (53%), Gaps = 18/343 (5%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 105 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 161

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 162 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 221

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 222 TALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 281

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +L+EL +  N+L ++P+ +     L  +++ NN   L  L
Sbjct: 282 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN--QLTTL 339

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+ +  L+ L+ L + +N++  LP     L  L+VL +  N L   P+   E+G    +Q
Sbjct: 340 PKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLPK---EIGQLQNLQ 396

Query: 378 YMADLVEKRDAKTQP--VKQKKSWVEMCFF-----SRSNKRKR 413
            +   +++    T P  ++Q K+  E+  +     S+  KR R
Sbjct: 397 ELC--LDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKRIR 437


>gi|242073460|ref|XP_002446666.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
 gi|241937849|gb|EES10994.1| hypothetical protein SORBIDRAFT_06g020060 [Sorghum bicolor]
          Length = 511

 Score =  175 bits (444), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 144/229 (62%), Gaps = 1/229 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L +N+L SLPD+IG L  LK 
Sbjct: 220 QLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLDHLEELRLAANSLVSLPDTIGLLSKLKI 279

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL V YN L  LP  +G ++  L  L +  N ++ LP+
Sbjct: 280 LNVSSNRLRALPDSISKCRSLVELDVSYNGLTYLPTNIGYELVNLRKLWIHMNKLRSLPS 339

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  ++SL  LD  FNEL  +P +    ++L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 340 SVCEMTSLYLLDAHFNELCGLPSAFGKLSSLEILNLSSNFSDLKELPSSFGDLLNLRELD 399

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +SNNQI  LPD+F  L +L  L +++NPL +PP  IV  G  AV +YM+
Sbjct: 400 LSNNQIHALPDTFGRLDKLEKLNLEQNPLAMPPEAIVNNGVDAVKEYMS 448



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 108/197 (54%), Gaps = 11/197 (5%)

Query: 76  SLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
           SL+ L   I + SK     L + N   + +  LPDSI K  SLV LD+S N +  +P  I
Sbjct: 263 SLVSLPDTIGLLSK-----LKILNVSSNRLRALPDSISKCRSLVELDVSYNGLTYLPTNI 317

Query: 136 G-GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           G  L +L+KL +H N++  LP S+ ++ SL  LD   N++  LP A  +L  LE L+L S
Sbjct: 318 GYELVNLRKLWIHMNKLRSLPSSVCEMTSLYLLDAHFNELCGLPSAFGKLSSLEILNLSS 377

Query: 195 N--NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV-- 250
           N  +L  LP S G L++L++L +  N +  LP T G+   L +L ++ N L   PEA+  
Sbjct: 378 NFSDLKELPSSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLAMPPEAIVN 437

Query: 251 -GKIHTLEVLSVRYNNI 266
            G     E +S R+ +I
Sbjct: 438 NGVDAVKEYMSKRWLDI 454


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  175 bits (443), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/275 (36%), Positives = 160/275 (58%), Gaps = 2/275 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  IG+L +L  LDLS N +  +P  +G L +L++LDLH NR+  LP  IG L
Sbjct: 80  FNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQL 139

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  N+++ LP  + +L  L+ELDL SN L++LP  IG L +LK L +    L 
Sbjct: 140 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLT 199

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N I  LP  +  L +L+ 
Sbjct: 200 TLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQW 259

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+  N+L ++P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP
Sbjct: 260 LDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLP 317

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
                L  LRVL +  N L   P+ ++ + +  V+
Sbjct: 318 KEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 352



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 145/253 (57%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L +L  L
Sbjct: 178 LPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEIL 237

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I+ALP  + +L  L+ LDL  N L++LP  IG L +L++L +  N L  LP  I
Sbjct: 238 VLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEI 297

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L +  N
Sbjct: 298 GQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN 357

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P   R L
Sbjct: 358 RLSTLPKEIGQLQNLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415

Query: 348 SRLRVLRVQENPL 360
             L+ L +  NPL
Sbjct: 416 KNLQELHLYLNPL 428



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 172/313 (54%), Gaps = 7/313 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL+ N++  +P  IG 
Sbjct: 128 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLNSNKLTTLPKEIGQ 184

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 185 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 244

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 245 TALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 304

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 305 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 362

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVV 376
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q + 
Sbjct: 363 PKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 422

Query: 377 QYMADLVEKRDAK 389
            Y+  L  K   +
Sbjct: 423 LYLNPLSSKEKKR 435


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  174 bits (442), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/263 (40%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD IGKL SL  L LS N +  +PA +  L SL+KLDL  NR  + P+ +G+L SL  L
Sbjct: 107 LPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQEL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GN++ +LP  +  L+ L++LDL  N+L +LP  I  L SL+KL ++ N  E LP  I
Sbjct: 167 DLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  ++L+EL +D+N+LK LP+ +G++  L +LS  +N  + LPT +  L +LREL+   N
Sbjct: 227 GNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+ +P  +     L K+ +  N  +L+ LP +IG L+ L EL +S N++  LP     L
Sbjct: 287 KLKLLPVEIGELKNLQKLYLSGN--NLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNL 344

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L+  P  I E+
Sbjct: 345 VNLQYLNLDHNKLKTLPDTIGEL 367



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/291 (35%), Positives = 158/291 (54%), Gaps = 33/291 (11%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
            E  P+ +G+L SL  LDLS N++ ++PA IG L +L+ LDLH N +  LP  I  L SL
Sbjct: 150 FEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L+ N+  +LP  +  L  L+ELDL  N L +LPD+IG L  L+ L    N+ E LP
Sbjct: 210 QKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLP 269

Query: 225 HTIGQCSSLRELRVDYNRLK-----------------------ALPEAVGKIHTLEVLSV 261
             + +  +LREL  D N+LK                        LP+ +G +  L  LS+
Sbjct: 270 TKVIELRNLRELNFDDNKLKLLPVEIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSL 329

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N ++ LP  + +L +L+ L++  N+L+++P+++     L K+ +G   + L  LP +I
Sbjct: 330 SGNELESLPAVIGNLVNLQYLNLDHNKLKTLPDTIGELKNLRKLYLGG--SKLEILPVAI 387

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLS-RLRVLRVQENPLEVPPRNIVEMG 371
           G LE L++L +S N++  LP     LS  LR+L ++ N       NI E+G
Sbjct: 388 GELENLQKLHLSGNKLETLPIEIEKLSGSLRLLNLRGN-------NISEVG 431



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/300 (36%), Positives = 163/300 (54%), Gaps = 8/300 (2%)

Query: 80  LASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLS 139
           + S I  S K   ++L L N   +N+E LP  + +L +L  L L+ NR+  +P  IG L 
Sbjct: 59  IDSYIRGSVKSEIKELVLSN---NNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLV 115

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL++L L  N +  LP  + +L SL  LDL  N+    P  +  L  L+ELDL  N L S
Sbjct: 116 SLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLES 175

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG+LI+L+ L +  N L+ LP  I +  SL++L +  NR ++LP  +G +  L+ L
Sbjct: 176 LPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQEL 235

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            + +N +K LP T+  L  LR L    NE ES+P  +     L ++N  +N   L+ LP 
Sbjct: 236 DLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDN--KLKLLPV 293

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG L+ L++L +S N ++ LPD+   L  LR L +  N LE  P  I   G    +QY+
Sbjct: 294 EIGELKNLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVI---GNLVNLQYL 350



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 110/198 (55%), Gaps = 2/198 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           ++EL L +NNL +LP  +  L +LK L +  N L+ LP  IG+  SL+EL +  N LK L
Sbjct: 71  IKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLL 130

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P  + ++ +L+ L +  N  ++ P  +  L SL+ELD+S N+LES+P  +     L  ++
Sbjct: 131 PAKMVELKSLQKLDLWKNRFEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLD 190

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP  I  L+ L++L++ NN+   LP     L+ L+ L +  N L+  P  
Sbjct: 191 LHEN--SLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKLKTLPDT 248

Query: 367 IVEMGAQAVVQYMADLVE 384
           I E+    ++ ++ +  E
Sbjct: 249 IGELKDLRILSFIHNEFE 266


>gi|168057803|ref|XP_001780902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162667684|gb|EDQ54308.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 376

 Score =  174 bits (441), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/240 (41%), Positives = 146/240 (60%), Gaps = 1/240 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL    +  +P++ G + SL+ L+L  N++  LP A+  LV+LE LDL  N L SLPDS
Sbjct: 127 LDLSTQFLSHVPETFGRISSLIILNLSNNRLEYLPDAVGGLVKLEVLDLQHNQLKSLPDS 186

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVR 262
           IG L SLK L +  N L+ LP ++G C +L EL  ++N+L+  P   G +   L+ L + 
Sbjct: 187 IGLLTSLKSLDISGNALKVLPASLGGCRALVELIANFNQLETWPADFGFQFSKLQTLCLH 246

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N +   P ++  L +L  LDV FN+L+ +P ++   + L  ++  +NF D   LP SIG
Sbjct: 247 LNKLTSFPPSIGELRALMFLDVHFNKLKGLPSTIGKLSNLTVLDASSNFRDFADLPDSIG 306

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           +L  L ELD+S NQI  LP S   L+ LR L++ ENP+ VPP  I+E G +A+++YMA L
Sbjct: 307 DLVSLTELDLSFNQIHELPISMGKLTNLRKLKLDENPIVVPPEEILEQGHEAIMKYMAKL 366



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 26/51 (50%), Positives = 35/51 (68%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           LPDSIG L SL  LDLS N+I  +P ++G L++L+KL L  N I+  P+ I
Sbjct: 301 LPDSIGDLVSLTELDLSFNQIHELPISMGKLTNLRKLKLDENPIVVPPEEI 351


>gi|440896879|gb|ELR48687.1| Malignant fibrous histiocytoma-amplified sequence 1, partial [Bos
           grunniens mutus]
          Length = 997

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +++G L  L  L+LS N++ A+PA +G L  L++LD+  NR+  LPDS   L  L  LD+
Sbjct: 81  EAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAGLSRLRTLDV 140

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 141 DHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE 200

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L
Sbjct: 201 LASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQL 260

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 261 TSVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 318

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 319 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 361



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 133/281 (47%), Gaps = 33/281 (11%)

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLE 188
           +PA IG    ++ L+L  N + E+PD +G  L SL  L LR N+ + LP A++ L   L 
Sbjct: 10  LPANIG---DIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLT 66

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+  N LS L                          +G    LR+L + +N+L ALP 
Sbjct: 67  ELDVSHNRLSVLGAE----------------------AVGALRELRKLNLSHNQLPALPA 104

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +G +  LE L V +N +  LP + + LS LR LDV  N+L + P  L     L ++++ 
Sbjct: 105 QLGALVHLEELDVSFNRLAHLPDSCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVS 164

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +N   LR LP  I  L  L+ L +S  ++  LP  F  L+ L  L +  N L   P    
Sbjct: 165 SN--RLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFS 222

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
            +    ++   ++L+E+  A   P+    + +E  + SR+ 
Sbjct: 223 RLQRLKMLNLSSNLLEEFPAALLPL----AGLEELYLSRNQ 259


>gi|326533850|dbj|BAJ93698.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 383

 Score =  173 bits (439), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 142/228 (62%), Gaps = 1/228 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L SN L SLPD++G L +LK L
Sbjct: 88  LPEAFGRILGLRVLDVSHNQLQVIPDAIGGLEHLEELRLASNALVSLPDTVGFLSNLKIL 147

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTT 272
            V TN L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++  P++
Sbjct: 148 NVSTNKLRTLPDSISKCRSLVELDASYNGLTYLPTNIGYELINLRKLWVHMNKLRSFPSS 207

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+D++ LP S G+L  L E+D+
Sbjct: 208 ICEMQSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDMKELPFSFGDLLNLREVDL 267

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           SNNQI  LPDSF  L +L  L +++NPL +P   +V+ G +AV +YM+
Sbjct: 268 SNNQIHALPDSFGRLDKLEKLNLEQNPLSMPSAEVVKEGVEAVKEYMS 315



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 30/213 (14%)

Query: 73  EKLSLIKLAS--LIEVSSKKG-TRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV 129
           E L  ++LAS  L+ +    G   +L + N   + +  LPDSI K  SLV LD S N + 
Sbjct: 119 EHLEELRLASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLVELDASYNGLT 178

Query: 130 AVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
            +P  IG  L +L+KL +H N++   P SI ++ SL  LD   N++  LP A+ +L  LE
Sbjct: 179 YLPTNIGYELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLSSLE 238

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
            L+L SN                      +D++ELP + G   +LRE+ +  N++ ALP+
Sbjct: 239 ILNLSSN---------------------FSDMKELPFSFGDLLNLREVDLSNNQIHALPD 277

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           + G++  LE L     N++Q P +M S   ++E
Sbjct: 278 SFGRLDKLEKL-----NLEQNPLSMPSAEVVKE 305


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 5/292 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 112 EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L ++P+ +     L ++++  N   L  LP+ IG L
Sbjct: 289 RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQL 346

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           + L+EL +  NQ+  LP     L  LRVL +  N L   P+ ++ + +  V+
Sbjct: 347 QNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 398



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 173/325 (53%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL  Q      +
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLRYQK-----L 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IG+L +L  LDLS N +  +P  IG L +L++LDL  N +  LP  +G L +L 
Sbjct: 61  TILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L+L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L +  N L  LP 
Sbjct: 121 RLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IGQ  +L+EL ++ N+L  LP+ + ++  L+ L +  N +  LP  +  L +L+ L++ 
Sbjct: 181 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
             +L ++P+ +     L  +N+ +N   L  LP+ IG L+ LE L +  N+I  LP    
Sbjct: 241 VTQLTTLPKEIGELQNLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L + +N L   P+ I ++
Sbjct: 299 QLQNLQWLDLHQNQLTTLPKEIGQL 323



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 147/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 219 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L++LP  IG L +L++L +  N L  
Sbjct: 279 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 338

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L
Sbjct: 339 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 398

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P 
Sbjct: 399 ALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPK 456

Query: 343 SFRMLSRLRVLRVQENPL 360
             R L  L+ L +  NPL
Sbjct: 457 EIRQLKNLQELHLYLNPL 474



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 171/313 (54%), Gaps = 7/313 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 174 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 230

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 231 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 290

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 291 TALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 350

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 351 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 408

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVV 376
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q + 
Sbjct: 409 PKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 468

Query: 377 QYMADLVEKRDAK 389
            Y+  L  K   +
Sbjct: 469 LYLNPLSSKEKKR 481


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 166/292 (56%), Gaps = 5/292 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 89  EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 146 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 206 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L ++P+ +     L ++++  N   L  LP+ IG L
Sbjct: 266 RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           + L+EL +  NQ+  LP     L  LRVL +  N L   P+ ++ + +  V+
Sbjct: 324 QNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 375



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/325 (31%), Positives = 174/325 (53%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL  Q      +
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLRYQK-----L 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IG+L +L  LDLS N +  +P  +G L +L++L+L++ ++  LP  IG L +L 
Sbjct: 61  TILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LDL  N ++ LP  + +L  L+ LDL  N L++LP  IG L +L++L + +N L  LP 
Sbjct: 121 ELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I Q  +L+EL +  N+L  LP+ +G++  L+ L++    +  LP  +  L +L+ L++ 
Sbjct: 181 EIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLL 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +     L  + +  N   + ALP+ IG L+ L+ LD+  NQ+  LP    
Sbjct: 241 DNQLTTLPKEIGELQNLEILVLREN--RITALPKEIGQLQNLQWLDLHQNQLTTLPKEIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L + +N L   P+ I ++
Sbjct: 299 QLQNLQRLDLHQNQLTTLPKEIGQL 323



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 147/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 196 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 255

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L++LP  IG L +L++L +  N L  
Sbjct: 256 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 315

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L
Sbjct: 316 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 375

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P 
Sbjct: 376 ALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPK 433

Query: 343 SFRMLSRLRVLRVQENPL 360
             R L  L+ L +  NPL
Sbjct: 434 EIRQLKNLQELHLYLNPL 451



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 171/313 (54%), Gaps = 7/313 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 151 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 207

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 208 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 267

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 268 TALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 327

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 328 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 385

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVV 376
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q + 
Sbjct: 386 PKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 445

Query: 377 QYMADLVEKRDAK 389
            Y+  L  K   +
Sbjct: 446 LYLNPLSSKEKKR 458


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +++G L  L  L+LS N++ A+PA +G L  L++LD+  NR+  LPDS   L  L  LD+
Sbjct: 127 EAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSRLRTLDV 186

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 187 DHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE 246

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L
Sbjct: 247 LASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQL 306

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 307 TSVPCLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 364

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 365 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 407



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/321 (29%), Positives = 148/321 (46%), Gaps = 35/321 (10%)

Query: 93  RDLNLQ-NKLMDNIEWLP-DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           RD  L+  KL  N+  L   S G       LD  +   + +PA IG    ++ L+L  N 
Sbjct: 16  RDATLRARKLRSNLRQLTLSSAGGCPXTDQLDSPDAPQLXLPANIG---DIEVLNLGNNG 72

Query: 151 IIELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLI 208
           + E+PD +G  L SL  L LR N+ + LP A++ L   L ELD+  N LS L        
Sbjct: 73  LEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAE----- 127

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
                             +G    LR+L + +N+L ALP  +G +  LE L V +N +  
Sbjct: 128 -----------------AVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAH 170

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP + + LS LR LDV  N+L + P  L     L ++++ +N   LR LP  I  L  L+
Sbjct: 171 LPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSN--RLRGLPEDISALRALK 228

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
            L +S  ++  LP  F  L+ L  L +  N L   P     +    ++   ++L+E+  A
Sbjct: 229 ILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPA 288

Query: 389 KTQPVKQKKSWVEMCFFSRSN 409
              P+    + +E  + SR+ 
Sbjct: 289 ALLPL----AGLEELYLSRNQ 305


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/288 (37%), Positives = 166/288 (57%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +++G L  L  L+LS N++ A+PA +G L  L++LD+  NR+  LPDS   L  L  LD+
Sbjct: 101 EAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLSRLRTLDV 160

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 161 DHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE 220

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L
Sbjct: 221 LASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQL 280

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 281 TSVPCLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 338

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 339 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 381



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 132/280 (47%), Gaps = 33/280 (11%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLEE 189
           PA IG    ++ L+L  N + E+PD +G  L SL  L LR N+ + LP A++ L   L E
Sbjct: 31  PANIG---DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTE 87

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LD+  N LS L                          +G    LR+L + +N+L ALP  
Sbjct: 88  LDVSHNRLSVLGAE----------------------AVGALRELRKLNLSHNQLPALPAQ 125

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G +  LE L V +N +  LP + + LS LR LDV  N+L + P  L     L ++++ +
Sbjct: 126 LGALVHLEELDVSFNRLAHLPDSFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSS 185

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   LR LP  I  L  L+ L +S  ++  LP  F  L+ L  L +  N L   P     
Sbjct: 186 N--RLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSR 243

Query: 370 MGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
           +    ++   ++L+E+  A   P+    + +E  + SR+ 
Sbjct: 244 LQRLKMLNLSSNLLEEFPAALLPL----AGLEELYLSRNQ 279


>gi|356502043|ref|XP_003519831.1| PREDICTED: LOW QUALITY PROTEIN: protein lap1-like [Glycine max]
          Length = 346

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/269 (40%), Positives = 157/269 (58%), Gaps = 16/269 (5%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++K+DL  +    LP + G + +LV LDL  NQ+  +P +++ L +L ELD+ SN L SL
Sbjct: 49  VEKVDLSGSHSRILPQAFGKIRALVVLDLSQNQLGVIPDSIAGLKKLVELDVSSNVLESL 108

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L++LK L V  + L  LP +I  C SL EL   +N L  LP  +G     LE L
Sbjct: 109 PDSIGLLVNLKILNVSASKLIALPESIALCRSLVELDASFNNLVCLPTNMGFGPVNLEKL 168

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N  + +P ++  + SLR LDV FNEL  +P S+   T L  +N+ +NF+D+  LP 
Sbjct: 169 LIHLNKXQFVPASIGEMKSLRHLDVHFNELHGLPXSIGKLTNLEYLNVSSNFSDMTELPE 228

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G+L  L ELD+SNNQIR LP        L  L + +NP+ VPP  +V  GA+AV  +M
Sbjct: 229 TLGDLVNLRELDLSNNQIRALP-------XLTKLNLDQNPIIVPPIEVVNQGAEAVKDFM 281

Query: 380 A----DLV----EKRDAKTQPVKQKKSWV 400
           A    DL+    +K  A+TQ  + +  W+
Sbjct: 282 AKWWLDLIDEAQQKSMAETQNHQAQTGWL 310



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/146 (37%), Positives = 89/146 (60%), Gaps = 3/146 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DLLS 163
           +E LPDSIG L +L  L++S ++++A+P +I    SL +LD   N ++ LP ++G   ++
Sbjct: 105 LESLPDSIGLLVNLKILNVSASKLIALPESIALCRSLVELDASFNNLVCLPTNMGFGPVN 164

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--DLE 221
           L  L +  N+   +P ++  +  L  LD+  N L  LP SIG L +L+ L V +N  D+ 
Sbjct: 165 LEKLLIHLNKXQFVPASIGEMKSLRHLDVHFNELHGLPXSIGKLTNLEYLNVSSNFSDMT 224

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALP 247
           ELP T+G   +LREL +  N+++ALP
Sbjct: 225 ELPETLGDLVNLRELDLSNNQIRALP 250



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/101 (36%), Positives = 66/101 (65%), Gaps = 4/101 (3%)

Query: 82  SLIEVSSKKGTRDLNLQNKL--MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLS 139
           +L+ + +  G   +NL+  L  ++  +++P SIG++ SL  LD+  N +  +P +IG L+
Sbjct: 150 NLVCLPTNMGFGPVNLEKLLIHLNKXQFVPASIGEMKSLRHLDVHFNELHGLPXSIGKLT 209

Query: 140 SLKKLDLHAN--RIIELPDSIGDLLSLVYLDLRGNQISALP 178
           +L+ L++ +N   + ELP+++GDL++L  LDL  NQI ALP
Sbjct: 210 NLEYLNVSSNFSDMTELPETLGDLVNLRELDLSNNQIRALP 250


>gi|116309899|emb|CAH66934.1| OSIGBa0116M22.1 [Oryza sativa Indica Group]
 gi|116310302|emb|CAH67320.1| OSIGBa0106G07.16 [Oryza sativa Indica Group]
          Length = 509

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/228 (44%), Positives = 141/228 (61%), Gaps = 1/228 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +  L  LD+  NQ+  +P A+  L  LEEL L SN L SLPDSIG L++L+ 
Sbjct: 216 HLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRI 275

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++ LP+
Sbjct: 276 LNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPS 335

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 336 SICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELD 395

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +SNNQI  LPDSF  L +L  L +++NPL +PP  IV  G  AV +YM
Sbjct: 396 LSNNQIHALPDSFGRLDKLEKLNLEQNPLSMPPMEIVSKGVDAVKEYM 443



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 84/143 (58%), Gaps = 3/143 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPDSI K  SL+ LD S N +  +P  IG  L +L+KL +H N++  LP SI ++ SL  
Sbjct: 286 LPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYL 345

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDLEELP 224
           LD   N++  LP A+ +L  LE L+L SN  +L  LP S G L++L++L +  N +  LP
Sbjct: 346 LDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALP 405

Query: 225 HTIGQCSSLRELRVDYNRLKALP 247
            + G+   L +L ++ N L   P
Sbjct: 406 DSFGRLDKLEKLNLEQNPLSMPP 428



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/91 (41%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP +IGKLSSL  L+LS N   +  +PA+ G L +L++LDL  N+
Sbjct: 341 RSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQ 400

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           I  LPDS G L  L  L+L  N +S  P+ +
Sbjct: 401 IHALPDSFGRLDKLEKLNLEQNPLSMPPMEI 431


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/322 (35%), Positives = 173/322 (53%), Gaps = 44/322 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SI KLS+L  L L  N++ ++P +I  LS+L +L L  N++  LP+SIG L +L  L
Sbjct: 87  LPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ+++LP ++++L  L EL LG N L+SLP+SI  L +L +L +  N L  LP +I
Sbjct: 147 DLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S+L  L + +N+L +LPE++ K+  L  L +  N +  LP ++++LS+L  LD+  N
Sbjct: 207 TKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTVLDLGSN 266

Query: 288 ELESV-----------------------PESLCFATTLVKMNIGNN-------------- 310
           +L S+                       PES+   + L K+++ NN              
Sbjct: 267 QLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTRLPESITKLSN 326

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L +LP SIG L  L  L + +NQ+ +LP+S   LS L  L +  NPLE P
Sbjct: 327 LTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTILPESITTLSNLGWLYLNNNPLENP 386

Query: 364 PRNIVEMGAQAVVQYMADLVEK 385
           P  I   G Q +  Y     EK
Sbjct: 387 PIEIATKGIQEIRDYFQQEREK 408



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 163/263 (61%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIGKLS+L SL L  N++ ++P +I  LS+L +L L  N++  LP+SI  L +L  L
Sbjct: 64  LPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTEL 123

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++++LP ++ +L  L  LDLG N L+SLP+SI  L +L +L +  N L  LP +I
Sbjct: 124 YLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESI 183

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S+L EL + +N+L +LPE++ K+  L  L + +N +  LP +++ LS+L  L +  N
Sbjct: 184 TKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSN 243

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+PES+   + L  +++G+N   L ++P SI  L  L EL +  NQ+  LP+S   L
Sbjct: 244 QLTSLPESITTLSNLTVLDLGSN--QLTSMPESITKLSNLTELYLDGNQLTRLPESITKL 301

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           S L  L ++ N L   P +I ++
Sbjct: 302 SNLTKLDLRNNQLTRLPESITKL 324



 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 101/263 (38%), Positives = 160/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + +L  L  LDL  N + ++P +IG LS+L  L L  N++  LP+SI  L +L  L
Sbjct: 41  VPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNKLTSLPESITKLSNLTEL 100

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+++LP ++++L  L EL L  N L+SLP+SIG L +L  L +  N L  LP +I
Sbjct: 101 YLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSNLTSLDLGGNQLTSLPESI 160

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S+L EL + +N+L +LPE++ K+  L  L + +N +  LP +++ LS+L  LD+S+N
Sbjct: 161 TKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWN 220

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+PES+   + L  + +G+N   L +LP SI  L  L  LD+ +NQ+  +P+S   L
Sbjct: 221 KLTSLPESITKLSNLTSLYLGSN--QLTSLPESITTLSNLTVLDLGSNQLTSMPESITKL 278

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           S L  L +  N L   P +I ++
Sbjct: 279 SNLTELYLDGNQLTRLPESITKL 301



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 149/258 (57%), Gaps = 2/258 (0%)

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
            K   L  L LS  ++  VP  +  L  L+ LDL +N +  LP+SIG L +L  L L  N
Sbjct: 23  AKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNN 82

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           ++++LP ++++L  L EL L  N L+SLP+SI  L +L +L +  N L  LP +IG+ S+
Sbjct: 83  KLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLSN 142

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L  L +  N+L +LPE++ K+  L  L + +N +  LP +++ LS+L EL +  N+L S+
Sbjct: 143 LTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTSL 202

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           PES+   + L  +++  N   L +LP SI  L  L  L + +NQ+  LP+S   LS L V
Sbjct: 203 PESITKLSNLTSLDLSWN--KLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSNLTV 260

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L   P +I ++
Sbjct: 261 LDLGSNQLTSMPESITKL 278


>gi|302817824|ref|XP_002990587.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
 gi|300141755|gb|EFJ08464.1| hypothetical protein SELMODRAFT_185397 [Selaginella moellendorffii]
          Length = 412

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/245 (41%), Positives = 154/245 (62%), Gaps = 1/245 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L +L+L    +  +P+SIG + SLV L+L  NQI  LP A++ L  LE L + SN L  L
Sbjct: 109 LSELNLCNQSLQLVPESIGRISSLVDLNLSTNQIEVLPDAIAGLANLERLQVQSNRLRIL 168

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEVL 259
           PDSIG + +LK L    N L++LP  I  CS+L EL  D+N+++ LP + G+ + +LE L
Sbjct: 169 PDSIGLMKNLKYLNCSRNQLKQLPERISGCSALIELNADFNKIEYLPSSFGRGMDSLERL 228

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S++ N++  LP T+  + +L+ LD+ FN+L S+P ++   T L  ++  +NF+DL ALP 
Sbjct: 229 SLQLNSLTYLPPTLCEVKTLKHLDLHFNKLRSLPRAIGNLTRLETLDASSNFSDLTALPE 288

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S+ +L  L  LD+  NQIR LP SF  L+ ++ L + ENPL  PP  IV+ G  A ++Y+
Sbjct: 289 SMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTLELDENPLVDPPLEIVQQGTPATMKYL 348

Query: 380 ADLVE 384
           A  +E
Sbjct: 349 AYRLE 353



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP +IG L+ L +LD S N   + A+P ++  L SL  LDL  N+I ELP S G L ++ 
Sbjct: 261 LPRAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIK 320

Query: 166 YLDLRGN 172
            L+L  N
Sbjct: 321 TLELDEN 327



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 38/66 (57%), Gaps = 3/66 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI---GDLLSL 164
           LP+S+  L SL  LDL  N+I  +P + G L+++K L+L  N +++ P  I   G   ++
Sbjct: 286 LPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTLELDENPLVDPPLEIVQQGTPATM 345

Query: 165 VYLDLR 170
            YL  R
Sbjct: 346 KYLAYR 351


>gi|168052852|ref|XP_001778853.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162669722|gb|EDQ56303.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 277

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 1/243 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L  L L +  +  +P+S G + SL+ L+L  N++  LP +++ LV LE LDL  N L  L
Sbjct: 17  LDTLVLSSQLLSHVPESFGRITSLIVLNLSNNRLEFLPDSIAGLVNLEVLDLQHNQLKLL 76

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L  L  L V  N L  LP ++G+CS+L EL  ++N L+  P   G ++  L++L
Sbjct: 77  PDSIGLLSKLNSLDVSGNQLRVLPASLGRCSALVELIANFNELEMWPSDFGFQLSNLQIL 136

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP ++  L +LR LDV FN+L  +P ++   T L  +++ +NF D  ALP 
Sbjct: 137 RLHLNKLTCLPPSVGELRALRVLDVHFNKLRGLPSTIGNLTNLSILDVSSNFKDFAALPD 196

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S+G+L  L ELD+S NQ+  LP S   L+ L+ L++ ENPL VPP  IVE G + V++YM
Sbjct: 197 SVGDLVSLTELDLSFNQLHELPISIGRLTNLKKLKLDENPLVVPPMEIVEQGHEVVMKYM 256

Query: 380 ADL 382
           A+L
Sbjct: 257 AEL 259



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
            + +  LP +IG L++L  LD+S N     A+P ++G L SL +LDL  N++ ELP SIG
Sbjct: 163 FNKLRGLPSTIGNLTNLSILDVSSNFKDFAALPDSVGDLVSLTELDLSFNQLHELPISIG 222

Query: 160 DLLSLVYLDLRGNQISALPVAL 181
            L +L  L L  N +   P+ +
Sbjct: 223 RLTNLKKLKLDENPLVVPPMEI 244


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  172 bits (436), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/275 (38%), Positives = 163/275 (59%), Gaps = 5/275 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R LNL+   + +   +P  IG+L+SL  L L EN++ +VPA IG L+SL +L+L  N++ 
Sbjct: 31  RKLNLEGNQLTS---MPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLT 87

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            +P  IG L SLV LDL  N ++++P  L +L  LE L L +N L+SLP  IG L SLK+
Sbjct: 88  SVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKE 147

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +    L  LP  IGQ +SLRE+ +  N+L +LP  +G++ +LE L +  N +  +P  
Sbjct: 148 LGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAE 207

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SL ELD+  N+L ++P  +   T+L ++++  N   L ++P  IG L  L EL++
Sbjct: 208 LWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGN--QLTSVPAEIGQLASLTELEL 265

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + NQ+  LP     L+ L+ L +  N L   P  I
Sbjct: 266 NGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEI 300



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 159/272 (58%), Gaps = 8/272 (2%)

Query: 105 IEW------LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           +EW      +P  +G+LS+L  L+L  N++ ++PA IG L+SL +L L  N++  +P  I
Sbjct: 11  LEWFGLIGAVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEI 70

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L SL  L+L  NQ++++P  + +L  L +LDL  N+L+S+P  +  L SL++LI++ N
Sbjct: 71  GQLTSLTELNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNN 130

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP  IGQ +SL+EL + + +L +LP  +G++ +L  + +  N +  LP  +  L+S
Sbjct: 131 QLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTS 190

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L +L +  N+L SVP  L   T+L ++++ +N   L  LP  IG L  L +L +S NQ+ 
Sbjct: 191 LEKLYLYGNQLTSVPAELWQLTSLEELDLKDN--QLTNLPAEIGQLTSLWQLHLSGNQLT 248

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P     L+ L  L +  N L   P  I ++
Sbjct: 249 SVPAEIGQLASLTELELNGNQLTSLPAEIGQL 280



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 109/290 (37%), Positives = 165/290 (56%), Gaps = 4/290 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +L+  ++DN  +  LP  IG+L+SL  L L   ++ ++PA IG L+SL+++ L+ N++  
Sbjct: 121 SLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTS 180

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L SL  L L GNQ++++P  L +L  LEELDL  N L++LP  IG L SL +L
Sbjct: 181 LPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQL 240

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  +P  IGQ +SL EL ++ N+L +LP  +G++ +L+ L +  N +  LP  +
Sbjct: 241 HLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEI 300

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L+SLR L +  N L SVP  +   T+L ++ +  N   L ++P  IG L  L  L   
Sbjct: 301 GQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGN--QLTSVPAEIGLLTSLRGLGFK 358

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           +NQ+  LP     L+ LR L ++ N L   P  I E+ A      M D V
Sbjct: 359 DNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIRELRAAGCTVGMDDGV 408



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + +L+SL  L L  N++ ++PA IG L+SLK+L LH  ++  LP  IG L SL  +
Sbjct: 112 VPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREV 171

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+++LP  + +L  LE+L L  N L+S+P  +  L SL++L ++ N L  LP  I
Sbjct: 172 HLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEI 231

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL +L +  N+L ++P  +G++ +L  L +  N +  LP  +  L+SL+EL+++ N
Sbjct: 232 GQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGN 291

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T+L  +++ +N   L ++P  IG L  L EL++  NQ+  +P    +L
Sbjct: 292 QLTSLPAEIGQLTSLRLLSLRDNL--LTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLL 349

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + LR L  ++N L   P  I ++
Sbjct: 350 TSLRGLGFKDNQLTSLPAEIGQL 372


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 155/269 (57%), Gaps = 2/269 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS N +  +P  +G L +L++LDLH NR+  LP  IG L +L  L
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ELDL  N L++LP  IG L +LK L      L  LP  I
Sbjct: 146 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEI 205

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L  LP+ +G++  LE+L +R N I  LP  +  L +L+ LD+  N
Sbjct: 206 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 265

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP     L
Sbjct: 266 QLTTLPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQL 323

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
             LRVL +  N L   P+ ++ + +  V+
Sbjct: 324 QNLRVLDLDNNQLTTLPKEVLRLQSLQVL 352



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/258 (36%), Positives = 146/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+    ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 173 NQLTTLPKEIGQLQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L++LP  IG L +L++L +  N L  
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTT 292

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 352

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P 
Sbjct: 353 ALGSNRLSTLPKEIGQLQNLQVLGLISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPK 410

Query: 343 SFRMLSRLRVLRVQENPL 360
             R L  L+ L +  NPL
Sbjct: 411 EIRQLKNLQELHLYLNPL 428



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 163/293 (55%), Gaps = 6/293 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 128 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 184

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+    ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 185 LQNLKTLNSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 244

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 245 TALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 304

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 305 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 362

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++
Sbjct: 363 PKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 415



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 110/189 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG+L +L  LDL +N++  +P  IG L +L++LDLH N++  LP  IG L 
Sbjct: 242 NRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQ 301

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ LP  + +L  L  LDL +N L++LP  +  L SL+ L + +N L  
Sbjct: 302 NLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLST 361

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP+ +G++  L+ L +  N +   P  +  L +L+EL
Sbjct: 362 LPKEIGQLQNLQVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQEL 421

Query: 283 DVSFNELES 291
            +  N L S
Sbjct: 422 HLYLNPLSS 430


>gi|326516954|dbj|BAJ96469.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 504

 Score =  172 bits (435), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 142/228 (62%), Gaps = 1/228 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L SN L SLPD++G L +LK L
Sbjct: 209 LPEAFGRILGLRVLDVSHNQLQVIPDAIGGLEHLEELRLASNALVSLPDTVGFLSNLKIL 268

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTT 272
            V TN L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++  P++
Sbjct: 269 NVSTNKLRTLPDSISKCRSLVELDASYNGLTYLPTNIGYELINLRKLWVHMNKLRSFPSS 328

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+D++ LP S G+L  L E+D+
Sbjct: 329 ICEMQSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDMKELPFSFGDLLNLREVDL 388

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           SNNQI  LPDSF  L +L  L +++NPL +P   +V+ G +AV +YM+
Sbjct: 389 SNNQIHALPDSFGRLDKLEKLNLEQNPLSMPSAEVVKEGVEAVKEYMS 436



 Score = 89.0 bits (219), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 111/213 (52%), Gaps = 30/213 (14%)

Query: 73  EKLSLIKLAS--LIEVSSKKG-TRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV 129
           E L  ++LAS  L+ +    G   +L + N   + +  LPDSI K  SLV LD S N + 
Sbjct: 240 EHLEELRLASNALVSLPDTVGFLSNLKILNVSTNKLRTLPDSISKCRSLVELDASYNGLT 299

Query: 130 AVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
            +P  IG  L +L+KL +H N++   P SI ++ SL  LD   N++  LP A+ +L  LE
Sbjct: 300 YLPTNIGYELINLRKLWVHMNKLRSFPSSICEMQSLYLLDAHFNELCGLPSAIGKLSSLE 359

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
            L+L SN                      +D++ELP + G   +LRE+ +  N++ ALP+
Sbjct: 360 ILNLSSN---------------------FSDMKELPFSFGDLLNLREVDLSNNQIHALPD 398

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           + G++  LE L     N++Q P +M S   ++E
Sbjct: 399 SFGRLDKLEKL-----NLEQNPLSMPSAEVVKE 426


>gi|302803741|ref|XP_002983623.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
 gi|300148460|gb|EFJ15119.1| hypothetical protein SELMODRAFT_119044 [Selaginella moellendorffii]
          Length = 427

 Score =  172 bits (435), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 101/241 (41%), Positives = 151/241 (62%), Gaps = 1/241 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L +L+L    +  +P+SIG + SLV L+L  NQ+  LP A++ L  LE L + SN L  L
Sbjct: 124 LSELNLCNQSLQLVPESIGRISSLVDLNLSTNQVEVLPDAIAGLANLERLQVQSNRLRIL 183

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEVL 259
           PDSIG + +LK L    N L++LP +I  CS+L EL  D+N+L+ LP   G+ + +LE L
Sbjct: 184 PDSIGLMKNLKYLNCSRNQLKQLPESISGCSALIELNADFNKLEYLPSRFGRGMDSLERL 243

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S++ N++  LP T+    +L+ LD+ FN+L S+P ++   T L  ++  +NF+DL ALP 
Sbjct: 244 SLQLNSLTYLPPTLCEAQTLKHLDLHFNKLRSLPRAIGNLTRLETLDASSNFSDLTALPE 303

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S+ +L  L  LD+  NQIR LP SF  L+ ++ L + ENPL  PP  IV+ G  A ++Y+
Sbjct: 304 SMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTLELDENPLVDPPLEIVQQGTPATMKYL 363

Query: 380 A 380
           A
Sbjct: 364 A 364



 Score = 45.4 bits (106), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 40/67 (59%), Gaps = 2/67 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP +IG L+ L +LD S N   + A+P ++  L SL  LDL  N+I ELP S G L ++ 
Sbjct: 276 LPRAIGNLTRLETLDASSNFSDLTALPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIK 335

Query: 166 YLDLRGN 172
            L+L  N
Sbjct: 336 TLELDEN 342



 Score = 38.5 bits (88), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 3/70 (4%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI---GD 160
           ++  LP+S+  L SL  LDL  N+I  +P + G L+++K L+L  N +++ P  I   G 
Sbjct: 297 DLTALPESMADLVSLTHLDLRYNQIRELPLSFGRLTNIKTLELDENPLVDPPLEIVQQGT 356

Query: 161 LLSLVYLDLR 170
             ++ YL  R
Sbjct: 357 PATMKYLAYR 366


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 175/265 (66%), Gaps = 5/265 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN-RIVAVPATIGGLSSLKKLDLHAN-RIIELPDSIG 159
            + I+ +P+S+  L +L  LDLS N +I  +P ++  L +L++LDL AN +I E+PDS+ 
Sbjct: 101 FNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLA 160

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L++L  L L GN I  +P  L+ LV L++L L    +  +PDS+ +L++L++L +  N 
Sbjct: 161 ALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQ 220

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           ++E+P ++   S+L+ L++++NR+K +P+++ K+ +L+ L +  N I ++P + ++L +L
Sbjct: 221 IKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNL 280

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++LD+  N+++ +P+S     +L ++N+G+N   ++ +P S G L  L++L++S+N+I  
Sbjct: 281 QKLDLGSNQIKKIPDSFGKLASLQQLNLGSN--QIKKIPDSFGKLASLQQLNLSHNKIEE 338

Query: 340 LPDSFRMLSRLRVLRVQENPL-EVP 363
           +PDSF  L  L+ L +  NP+ EVP
Sbjct: 339 IPDSFATLVNLQQLYLYNNPIKEVP 363



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 98/272 (36%), Positives = 170/272 (62%), Gaps = 4/272 (1%)

Query: 95  LNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +NLQ   + N  I+ +PDS+  LS+L  L L+ NRI  +P ++  L+SL++LDL+ N+I 
Sbjct: 209 VNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQIS 268

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           E+PDS   L +L  LDL  NQI  +P +  +L  L++L+LGSN +  +PDS G L SL++
Sbjct: 269 EIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQ 328

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N +EE+P +     +L++L +  N +K +P+++  +  L+ L    N IK++P +
Sbjct: 329 LNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQIKEIPDS 388

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +++L +L++LD+S N+++ +P+SL   T L   N+G +   +  +P  +  L  L++L++
Sbjct: 389 LATLVNLQQLDISSNQIKEIPDSLAALTHL--QNLGLSSTQITEIPDFLSTLVNLQQLNL 446

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           S NQI+ +PDSF  L+ L+ L +  N +   P
Sbjct: 447 SFNQIKKIPDSFVKLASLQALYLCSNQITKIP 478



 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 170/268 (63%), Gaps = 2/268 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ +PDS+  L +L  L L  N+I  +P ++  LS+L++L L+ NRI ++PDS+  L SL
Sbjct: 198 IKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASL 257

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQIS +P + + L  L++LDLGSN +  +PDS G L SL++L + +N ++++P
Sbjct: 258 QQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIP 317

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            + G+ +SL++L + +N+++ +P++   +  L+ L +  N IK++P ++++L +L++L  
Sbjct: 318 DSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGF 377

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+++ +P+SL     L +++I +N   ++ +P S+  L  L+ L +S+ QI  +PD  
Sbjct: 378 SSNQIKEIPDSLATLVNLQQLDISSN--QIKEIPDSLAALTHLQNLGLSSTQITEIPDFL 435

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L  L+ L +  N ++  P + V++ +
Sbjct: 436 STLVNLQQLNLSFNQIKKIPDSFVKLAS 463



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 170/287 (59%), Gaps = 27/287 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LP    +L  L  L+   N + A+P  I     LK+L+L  N+I E+P+S+  L+
Sbjct: 56  NNLKTLPPETTQLQKLKRLEWPCNNLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALI 115

Query: 163 SLVYLDLRGN-QISALPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDL 220
           +L  LDL  N QI  +P +LS L+ L++LDL +N+ +  +PDS+ +L++L++L +  N +
Sbjct: 116 NLQQLDLSANHQIKEIPDSLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPI 175

Query: 221 EELPHTIGQCSSLRELRVD-----------------------YNRLKALPEAVGKIHTLE 257
           +E+P+ +    SL++L ++                        N++K +P+++  +  L+
Sbjct: 176 KEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQ 235

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L + +N IK++P +++ L+SL++LD++ N++  +P+S      L K+++G+N   ++ +
Sbjct: 236 RLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSN--QIKKI 293

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           P S G L  L++L++ +NQI+ +PDSF  L+ L+ L +  N +E  P
Sbjct: 294 PDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIP 340



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 156/260 (60%), Gaps = 3/260 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ +PDS+  L +L  L L  N I  +P  +  L SL++L L+   I E+PDS+  L++L
Sbjct: 152 IKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNL 211

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQI  +P +L+ L  L+ L L  N +  +PDS+  L SL++L +  N + E+P
Sbjct: 212 QQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIP 271

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +     +L++L +  N++K +P++ GK+ +L+ L++  N IK++P +   L+SL++L++
Sbjct: 272 DSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQIKKIPDSFGKLASLQQLNL 331

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N++E +P+S      L ++ + NN   ++ +P S+  L  L++L  S+NQI+ +PDS 
Sbjct: 332 SHNKIEEIPDSFATLVNLQQLYLYNN--PIKEVPDSLATLVNLQQLGFSSNQIKEIPDSL 389

Query: 345 RMLSRLRVLRVQENPL-EVP 363
             L  L+ L +  N + E+P
Sbjct: 390 ATLVNLQQLDISSNQIKEIP 409



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 123/194 (63%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +PDS GKL+SL  L+LS N+I  +P +   L +L++L L+ N I E+PDS+  L+
Sbjct: 311 NQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLV 370

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L    NQI  +P +L+ LV L++LD+ SN +  +PDS+ +L  L+ L + +  + E
Sbjct: 371 NLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITE 430

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +    +L++L + +N++K +P++  K+ +L+ L +  N I ++P+ + +L +L++L
Sbjct: 431 IPDFLSTLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKL 490

Query: 283 DVSFNELESVPESL 296
           D+  N +   PE L
Sbjct: 491 DLRLNPIPVSPEIL 504



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 129/236 (54%), Gaps = 30/236 (12%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLG-------SNNLSSLPDSIGSLISLKKLIVETND 219
           LDL G  + ALP A+ +L +LE L LG        NNL +LP     L  LK+L    N+
Sbjct: 21  LDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNN 80

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN-IKQLPTTMSSLSS 278
           LE +P  I +   L++L + +N++K +PE++  +  L+ L +  N+ IK++P ++S+L +
Sbjct: 81  LEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALIN 140

Query: 279 LRELDVSFN-ELESVPESLCFATTLVKMNIGNN---------------------FADLRA 316
           L++LD+S N +++ +P+SL     L ++ +G N                        ++ 
Sbjct: 141 LQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKE 200

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +P S+  L  L++L + NNQI+ +PDS   LS L+ L++  N ++  P ++ ++ +
Sbjct: 201 IPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLAS 256



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 104/184 (56%), Gaps = 10/184 (5%)

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIV-------ETNDLEELPHTIGQCSSLRELRVDYN 241
           ELDL   NL +LP +IG L  L+ LI+       + N+L+ LP    Q   L+ L    N
Sbjct: 20  ELDLSGMNLDALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCN 79

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN-ELESVPESLCFAT 300
            L+A+P  + K   L+ L++ +N IK++P ++S+L +L++LD+S N +++ +P+SL    
Sbjct: 80  NLEAIPVIITKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALI 139

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++++  N   ++ +P S+  L  L++L +  N I+ +P     L  L+ L + +  +
Sbjct: 140 NLQQLDLSANH-QIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGI 198

Query: 361 -EVP 363
            E+P
Sbjct: 199 KEIP 202


>gi|38605760|emb|CAE05859.2| OSJNBa0044K18.1 [Oryza sativa Japonica Group]
          Length = 434

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 141/228 (61%), Gaps = 1/228 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +  L  LD+  NQ+  +P A+  L  LEEL L SN L SLPDSIG L++L+ 
Sbjct: 141 HLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRI 200

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++ LP+
Sbjct: 201 LNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPS 260

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 261 SICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELD 320

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +SNNQI  LPD+F  L +L  L +++NPL +PP  IV  G  AV +YM
Sbjct: 321 LSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYM 368



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPDSI K  SL+ LD S N +  +P  IG  L +L+KL +H N++  LP SI ++ SL  
Sbjct: 211 LPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYL 270

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDLEELP 224
           LD   N++  LP A+ +L  LE L+L SN  +L  LP S G L++L++L +  N +  LP
Sbjct: 271 LDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALP 330

Query: 225 HTIGQCSSLRELRVDYNRLKALP 247
              G+   L +L ++ N L   P
Sbjct: 331 DNFGRLDKLEKLNLEQNPLSMPP 353



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP +IGKLSSL  L+LS N   +  +PA+ G L +L++LDL  N+
Sbjct: 266 RSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQ 325

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           I  LPD+ G L  L  L+L  N +S  P+ +
Sbjct: 326 IHALPDNFGRLDKLEKLNLEQNPLSMPPMEI 356


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 155/269 (57%), Gaps = 2/269 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS N +  +P  +G L +L++LDLH NR+  LP  IG L +L  L
Sbjct: 86  LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ELDL  N L++LP  IG L +LK L +    L  LP  I
Sbjct: 146 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 205

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L  LP+ +G++  LE+L +R N I  LP  +  L +L+ LD+  N
Sbjct: 206 GELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQN 265

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP     L
Sbjct: 266 QLTILPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQL 323

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
             LRVL +  N L   P+ ++ + +  V+
Sbjct: 324 QNLRVLDLDNNQLTTLPKEVLRLQSLQVL 352



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 146/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 173 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 232

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L+ LP  IG L +L++L +  N L  
Sbjct: 233 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTT 292

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L
Sbjct: 293 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 352

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P 
Sbjct: 353 ALGSNRLSTLPKEIGQLQNLQVLALISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPK 410

Query: 343 SFRMLSRLRVLRVQENPL 360
             R L  L+ L +  NPL
Sbjct: 411 EIRQLKNLQELHLYLNPL 428



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 171/313 (54%), Gaps = 7/313 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 128 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 184

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 185 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 244

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 245 TALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 304

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 305 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 362

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVV 376
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q + 
Sbjct: 363 PKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 422

Query: 377 QYMADLVEKRDAK 389
            Y+  L  K   +
Sbjct: 423 LYLNPLSSKEKKR 435


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/292 (35%), Positives = 165/292 (56%), Gaps = 5/292 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 112 EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L  +P+ +     L ++++  N   L  LP+ IG L
Sbjct: 289 RITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQL 346

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           + L+EL +  NQ+  LP     L  LRVL +  N L   P+ ++ + +  V+
Sbjct: 347 QNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 398



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/325 (31%), Positives = 174/325 (53%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL  Q      +
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKTLQNPLKVRTLDLRYQK-----L 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IG+L +L  LDLS N +  +P  IG L +L++LDL  N +  LP  +G L +L 
Sbjct: 61  TILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L+L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L +  N L  LP 
Sbjct: 121 RLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPM 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IGQ  +L+EL ++ N+L  LP+ + ++  L+ L +  N +  LP  +  L +L+ L++ 
Sbjct: 181 EIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLI 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
             +L ++P+ +     L  +N+ +N   L  LP+ IG L+ LE L +  N+I  LP    
Sbjct: 241 VTQLTTLPKEIGELQNLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L + +N L + P+ I ++
Sbjct: 299 QLQNLQWLDLHQNQLTILPKEIGQL 323



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 146/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L  N++  LP  IG+L 
Sbjct: 219 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQ 278

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I+ALP  + +L  L+ LDL  N L+ LP  IG L +L++L +  N L  
Sbjct: 279 NLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTT 338

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N +  LP  +  L SL+ L
Sbjct: 339 LPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVL 398

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + +N   L  LP+ IG L+ L+EL +  NQ+   P 
Sbjct: 399 ALGSNRLSTLPKEIGQLQNLQVLALISN--QLTTLPKEIGQLQNLQELCLDENQLTTFPK 456

Query: 343 SFRMLSRLRVLRVQENPL 360
             R L  L+ L +  NPL
Sbjct: 457 EIRQLKNLQELHLYLNPL 474



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/313 (32%), Positives = 171/313 (54%), Gaps = 7/313 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 174 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 230

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +
Sbjct: 231 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRI 290

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+
Sbjct: 291 TALPKEIGQLQNLQWLDLHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQ 350

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  L
Sbjct: 351 ELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTL 408

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVV 376
           P+ IG L+ L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q + 
Sbjct: 409 PKEIGQLQNLQVLALISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELH 468

Query: 377 QYMADLVEKRDAK 389
            Y+  L  K   +
Sbjct: 469 LYLNPLSSKEKKR 481


>gi|222629055|gb|EEE61187.1| hypothetical protein OsJ_15183 [Oryza sativa Japonica Group]
          Length = 438

 Score =  171 bits (434), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 141/228 (61%), Gaps = 1/228 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +  L  LD+  NQ+  +P A+  L  LEEL L SN L SLPDSIG L++L+ 
Sbjct: 145 HLPEAFGRIQGLRVLDVSRNQLEVIPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRI 204

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL   YN L  LP  +G ++  L  L V  N ++ LP+
Sbjct: 205 LNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPS 264

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 265 SICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELD 324

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +SNNQI  LPD+F  L +L  L +++NPL +PP  IV  G  AV +YM
Sbjct: 325 LSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYM 372



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 57/143 (39%), Positives = 83/143 (58%), Gaps = 3/143 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPDSI K  SL+ LD S N +  +P  IG  L +L+KL +H N++  LP SI ++ SL  
Sbjct: 215 LPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYL 274

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDLEELP 224
           LD   N++  LP A+ +L  LE L+L SN  +L  LP S G L++L++L +  N +  LP
Sbjct: 275 LDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALP 334

Query: 225 HTIGQCSSLRELRVDYNRLKALP 247
              G+   L +L ++ N L   P
Sbjct: 335 DNFGRLDKLEKLNLEQNPLSMPP 357



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP +IGKLSSL  L+LS N   +  +PA+ G L +L++LDL  N+
Sbjct: 270 RSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQ 329

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           I  LPD+ G L  L  L+L  N +S  P+ +
Sbjct: 330 IHALPDNFGRLDKLEKLNLEQNPLSMPPMEI 360


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 111/322 (34%), Positives = 171/322 (53%), Gaps = 13/322 (4%)

Query: 54  FRNK---VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLMDNI 105
           FRN    + I+++C CC  +  EK     L    +  +       G R+    N   D +
Sbjct: 68  FRNIGVILSIILLCFCCTIEAKEKGVYYNLTEAFQHPTDVQYLYLGPRERKHSN---DPL 124

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IGKL +L  LDLS N+++ +P  IG L  L+KL+L  NR+  LP+ IG L +L 
Sbjct: 125 WTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQ 184

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LDL GNQ++ LP  +  L  L+ LDL  N L++LP  IG L +LKKL +  N L   P 
Sbjct: 185 ELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPK 244

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I    +L+ L +  N+L  LP+ VGK+  L+ +    N +  LP  + +L +L+EL ++
Sbjct: 245 EIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLA 304

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +     L ++ +  N   L  LP  IGNL+ L+ L + NN++   P    
Sbjct: 305 HNQLTALPKEIGNLQNLQQLYLYGN--QLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIG 362

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L +L+ L + +N L   P+ I
Sbjct: 363 NLQKLKWLGLNKNQLTTIPKEI 384



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/327 (32%), Positives = 177/327 (54%), Gaps = 31/327 (9%)

Query: 70  QDGEKLSLIK--LASLIEVSSK-KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           Q  +KL+L +  LA+L E   K +  ++L+L+    + +  LP+ IG L +L +LDL  N
Sbjct: 158 QKLQKLNLTRNRLANLPEEIGKLQNLQELDLEG---NQLATLPEEIGNLQNLQTLDLEGN 214

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           ++  +P  IG L +LKKL L+ NR+   P  I DL +L  L L  NQ++ LP  + +L  
Sbjct: 215 QLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQN 274

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE----------- 235
           L+E+    N L++LP  IG+L +L++L +  N L  LP  IG   +L++           
Sbjct: 275 LQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTL 334

Query: 236 ------------LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
                       L +  N+L A P+ +G +  L+ L +  N +  +P  + +L +L+EL+
Sbjct: 335 PIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELN 394

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +S N+L ++P+ +     L  +++ NN   L ALP+ IGNL+ L+ELD+++N++  LP  
Sbjct: 395 LSSNQLTTIPKEIENLQNLQVLDLNNN--QLTALPKEIGNLQNLKELDLTSNRLTTLPKE 452

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEM 370
              L  L  L +  NPL   P  I ++
Sbjct: 453 IGNLQSLESLDLSNNPLTSFPEEIGKL 479



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/258 (33%), Positives = 140/258 (54%), Gaps = 25/258 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +GKL +L  +  S+N++  +P  IG L +L++L L  N++  LP  IG+L +L  L
Sbjct: 265 LPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTALPKEIGNLQNLQQL 324

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ LP+ +  L  L+ L LG+N L++ P  IG+L  LK L +  N L  +P  I
Sbjct: 325 YLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKLKWLGLNKNQLTTIPKEI 384

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL +  N+L  +P+ +  +  L+VL +  N +  LP  + +L +L+ELD++ N
Sbjct: 385 GNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALPKEIGNLQNLKELDLTSN 444

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L +                         LP+ IGNL+ LE LD+SNN +   P+    L
Sbjct: 445 RLTT-------------------------LPKEIGNLQSLESLDLSNNPLTSFPEEIGKL 479

Query: 348 SRLRVLRVQENPLEVPPR 365
             L+ LR++  P  +P +
Sbjct: 480 QHLKRLRLENIPTLLPQK 497



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 25/148 (16%)

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +LR+L +  N+L  LP+ +GK+  L+ L++  N +  LP  +  L +L+EL
Sbjct: 127 LPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQEL 186

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L ++PE                          IGNL+ L+ LD+  NQ+  LP 
Sbjct: 187 DLEGNQLATLPEE-------------------------IGNLQNLQTLDLEGNQLTTLPK 221

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L   P+ I ++
Sbjct: 222 EIGKLQNLKKLYLYNNRLTTFPKEIEDL 249


>gi|344281680|ref|XP_003412606.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Loxodonta africana]
          Length = 1050

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 166/286 (58%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ ++PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP +  + +
Sbjct: 191 NQLTAFPQQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSSFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQKLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLSRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P  +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEVLNLGNNGLEEVPHGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A P+ +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPQQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P +  E+ +
Sbjct: 243 PSSFCELAS 251



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 138/292 (47%), Gaps = 35/292 (11%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALPV 179
           L+  E   + +PA IG    ++ L+L  N + E+P  +G  L SL  L LR N+ + LP 
Sbjct: 48  LESPEAPQLVLPANIG---DIEVLNLGNNGLEEVPHGLGSALGSLRVLVLRRNRFARLPP 104

Query: 180 ALSRL-VRLEELDLGSNNLSSL-PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           A++ L   L ELD+  N L++L  + + +L  L+KL +  N L  LP  +G  + L EL 
Sbjct: 105 AVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELD 164

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           V +NRL  LP+++  +H L  L V +N +   P  +  L +L ELDVS N L        
Sbjct: 165 VSFNRLAHLPDSLSCLHRLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRL-------- 216

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
                            R LP  I  L  L+ L +S  ++  LP SF  L+ L  L +  
Sbjct: 217 -----------------RGLPEDISALRALKILWLSGAELGTLPSSFCELASLESLMLDN 259

Query: 358 NPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
           N L+  P     +    ++   ++L E+  A   P+    + +E  + SR+ 
Sbjct: 260 NGLQALPAQFSRLQKLKMLNLSSNLFEEFPAALLPL----AGLEELYLSRNQ 307


>gi|413918659|gb|AFW58591.1| protein lap1 [Zea mays]
          Length = 753

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 141/229 (61%), Gaps = 1/229 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L +N+L SLPD+IG L +LK 
Sbjct: 462 HLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 521

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL V YN L  LP  +G  +  L  L +  N ++ LP+
Sbjct: 522 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 581

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P      + L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 582 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 641

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +SNNQI  LPD+F  L +L  L +++NPL +PP +IV  G  AV +YM+
Sbjct: 642 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMS 690



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 6/179 (3%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRII 152
           +L + N   + +  LPDSI K  SLV L++S N +  +P  IG  L +L+KL +H N++ 
Sbjct: 518 NLKILNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLR 577

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISL 210
            LP S+ ++ SL  LD   N++  LP    +L  LE L+L SN  +L  LP S G L++L
Sbjct: 578 SLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNL 637

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTLEVLSVRYNNI 266
           ++L +  N +  LP T G+   L +L ++ N L   PE +   G     E +S R+ +I
Sbjct: 638 RELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKRWLDI 696



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   LNL +   D ++ LP S G L +L  LDLS N+I A+P T G L  L+KL+L  N 
Sbjct: 611 GLEILNLSSNFSD-LKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNP 669

Query: 151 IIELP--------DSIGDLLSLVYLDL 169
           ++  P        D++ + +S  +LD+
Sbjct: 670 LVMPPEDIVNKGVDAVKEYMSKRWLDI 696



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 46/84 (54%), Gaps = 2/84 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP   GKLS L  L+LS N   +  +P + G L +L++LDL  N+
Sbjct: 587 RSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQ 646

Query: 151 IIELPDSIGDLLSLVYLDLRGNQI 174
           I  LPD+ G L  L  L+L  N +
Sbjct: 647 IHALPDTFGRLDKLEKLNLEQNPL 670


>gi|386392500|ref|ZP_10077281.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
 gi|385733378|gb|EIG53576.1| small GTP-binding protein domain [Desulfovibrio sp. U5L]
          Length = 1279

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 159/265 (60%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L  L SL +S   +  +P +I  LS+L++LD+  +  I LPDSIG++ +L  L
Sbjct: 97  LPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDL 156

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++    ++ LP ++ +L RL+ LD+ S  L+SLPDSIG L  LK L V   DL  LP +I
Sbjct: 157 NVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSI 216

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L V    L  LP+++G++ +L+ L V   +++ LP ++  LSSL+ LDVS  
Sbjct: 217 GQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGT 276

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+   ++L  +++ +    +  LP SIG L  L+ LD+S+  +  LPDS   L
Sbjct: 277 RLQILPDSIVQLSSLQHLDVSD--TSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQL 334

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           S L+ L V +  L   P  I  + +
Sbjct: 335 SNLQHLEVSDASLNTLPETIWRLSS 359



 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/265 (36%), Positives = 160/265 (60%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG++ +L  L++S   +  +PA+IG L+ L+ LD+ +  +  LPDSIG L  L +L
Sbjct: 143 LPDSIGEMPNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHL 202

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+ G  ++ LP ++ +L  L+ LD+ S +L++LPDSIG L SL+ L V    L+ LP +I
Sbjct: 203 DVSGTDLATLPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSI 262

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ SSL+ L V   RL+ LP+++ ++ +L+ L V   +I  LP ++  LS+L+ LDVS  
Sbjct: 263 GQLSSLQHLDVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDT 322

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+   + L  + + +  A L  LP +I  L  L++L++S   +  LP++   L
Sbjct: 323 SLNTLPDSIGQLSNLQHLEVSD--ASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQL 380

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           S L+ L +    L   P  I ++ +
Sbjct: 381 SSLQDLNLSGTGLTTLPEAICQLNS 405



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 156/265 (58%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG+L++L  LD+S   +  +P +IG LSSL+ LD+    +  LPDSIG L SL +L
Sbjct: 212 LPDSIGQLTNLKHLDVSSTSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHL 271

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+ G ++  LP ++ +L  L+ LD+   ++++LPDSIG L +L+ L V    L  LP +I
Sbjct: 272 DVSGTRLQILPDSIVQLSSLQHLDVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSI 331

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S+L+ L V    L  LPE + ++ +L+ L++    +  LP  +  LSSL++L++S  
Sbjct: 332 GQLSNLQHLEVSDASLNTLPETIWRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGT 391

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++PE++C   +L  +N+      L  LP +I  L  L++L++S   +  LP++   L
Sbjct: 392 GLTTLPEAICQLNSLQDLNLSG--TGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQL 449

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           + L+ L +    L   P  I ++ +
Sbjct: 450 NSLQDLNLSGTGLTTLPGAICQLNS 474



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 154/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG+LSSL  LD+S   +  +P +IG LSSL+ LD+   R+  LPDSI  L SL +L
Sbjct: 235 LPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSIVQLSSLQHL 294

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+    I+ LP ++ +L  L+ LD+   +L++LPDSIG L +L+ L V    L  LP TI
Sbjct: 295 DVSDTSINNLPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETI 354

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + SSL++L +    L  LPEA+ ++ +L+ L++    +  LP  +  L+SL++L++S  
Sbjct: 355 WRLSSLQDLNLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGT 414

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++PE++C   +L  +N+      L  LP +I  L  L++L++S   +  LP +   L
Sbjct: 415 GLTTLPEAICQLNSLQDLNLSG--TGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQL 472

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +    L   P  I ++
Sbjct: 473 NSLQDLNLSGTGLTTLPETIGQL 495



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 158/265 (59%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG+LS+L  LD+S+  +  +P +IG LS+L+ L++    +  LP++I  L SL  L
Sbjct: 304 LPDSIGQLSNLQHLDVSDTSLNTLPDSIGQLSNLQHLEVSDASLNTLPETIWRLSSLQDL 363

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L G  ++ LP AL +L  L++L+L    L++LP++I  L SL+ L +    L  LP  I
Sbjct: 364 NLSGTGLTTLPEALCQLSSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPEAI 423

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q +SL++L +    L  LPEA+ ++++L+ L++    +  LP  +  L+SL++L++S  
Sbjct: 424 CQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGT 483

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++PE++   T L  +   N    L  LP ++G L  LE L+ISN  +  LPDS  +L
Sbjct: 484 GLTTLPETIGQLTNLNNLMASN--TALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLL 541

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           S L++L V +  L   P +I ++ +
Sbjct: 542 SHLQILFVSDTDLVTLPESIGQLTS 566



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 167/302 (55%), Gaps = 8/302 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +DLNL       +  LP++I +L+SL  L+LS   +  +P  I  L+SL+ L+L    + 
Sbjct: 384 QDLNLSGT---GLTTLPEAICQLNSLQDLNLSGTGLTTLPEAICQLNSLQDLNLSGTGLT 440

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++I  L SL  L+L G  ++ LP A+ +L  L++L+L    L++LP++IG L +L  
Sbjct: 441 TLPEAICQLNSLQDLNLSGTGLTTLPGAICQLNSLQDLNLSGTGLTTLPETIGQLTNLNN 500

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L+     L  LP T+GQ S+L  L +    L  LP+++G +  L++L V   ++  LP +
Sbjct: 501 LMASNTALTTLPDTLGQLSNLEFLNISNTSLVTLPDSIGLLSHLQILFVSDTDLVTLPES 560

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SL  L+VS   L S+PES+   T L  +N+ N   DL +LP SIG L+ L +L++
Sbjct: 561 IGQLTSLEILNVSNTGLTSLPESIGRLTNLQILNVSN--TDLTSLPESIGQLKSLIKLNV 618

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
           SN  +  LP S R L  LR L V    L +PP  I     + ++ Y     +KR+ +   
Sbjct: 619 SNTGLTSLPMSIRQLLLLRQLTVTATKLPIPPEIIESSDPEKLLSY---FYKKREEQLNE 675

Query: 393 VK 394
            K
Sbjct: 676 AK 677



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 155/266 (58%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP  +  L++L SL ++ N I  +P  +  L+ L+ L++    + +LP+ IG+L+ L
Sbjct: 48  LSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNISGTSLKKLPEFIGELVGL 107

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +    ++ LP ++ +L  L  LD+  +   +LPDSIG + +L+ L V + DL  LP
Sbjct: 108 QSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEMPNLQDLNVSSTDLTTLP 167

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IGQ + L+ L V    L +LP+++G++  L+ L V   ++  LP ++  L++L+ LDV
Sbjct: 168 ASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLATLPDSIGQLTNLKHLDV 227

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S   L ++P+S+   ++L  +++      L+ LP SIG L  L+ LD+S  ++++LPDS 
Sbjct: 228 SSTSLNTLPDSIGQLSSLQHLDVSG--TSLQTLPDSIGQLSSLQHLDVSGTRLQILPDSI 285

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             LS L+ L V +  +   P +I ++
Sbjct: 286 VQLSSLQHLDVSDTSINNLPDSIGQL 311



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/262 (32%), Positives = 142/262 (54%), Gaps = 2/262 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           ++ K      LDLS   +  +P  +  L++LK L + +N I  LP  +  L  L  L++ 
Sbjct: 31  TLAKQEKWSCLDLSALELSFLPLDLPPLTNLKSLTIASNPITILPKWLECLTGLETLNIS 90

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           G  +  LP  +  LV L+ L +    L++LP+SI  L +L++L +  +    LP +IG+ 
Sbjct: 91  GTSLKKLPEFIGELVGLQSLYVSRTALTTLPNSIRQLSNLRRLDISFSGFINLPDSIGEM 150

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L++L V    L  LP ++G++  L+ L V    +  LP ++  LS L+ LDVS  +L 
Sbjct: 151 PNLQDLNVSSTDLTTLPASIGQLTRLQHLDVSSTGLTSLPDSIGQLSMLKHLDVSGTDLA 210

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           ++P+S+   T L  +++ +    L  LP SIG L  L+ LD+S   ++ LPDS   LS L
Sbjct: 211 TLPDSIGQLTNLKHLDVSS--TSLNTLPDSIGQLSSLQHLDVSGTSLQTLPDSIGQLSSL 268

Query: 351 RVLRVQENPLEVPPRNIVEMGA 372
           + L V    L++ P +IV++ +
Sbjct: 269 QHLDVSGTRLQILPDSIVQLSS 290


>gi|109085638|ref|XP_001090936.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Macaca mulatta]
          Length = 1052

 Score =  171 bits (433), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 165/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|402912243|ref|XP_003918687.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1,
           partial [Papio anubis]
          Length = 1076

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 165/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 155 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSRLRTLDVDH 214

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 215 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELA 274

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L S
Sbjct: 275 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTS 334

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 335 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 392

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 393 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 433



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 89  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 148

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 149 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSRLR 208

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 209 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 266

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 267 PAGFCELAS 275


>gi|355779520|gb|EHH63996.1| Malignant fibrous histiocytoma-amplified sequence with leucine-rich
           tandem repeats 1, partial [Macaca fascicularis]
          Length = 944

 Score =  171 bits (433), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 165/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 23  VSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLTHLPDSLSCLSRLRTLDVDH 82

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 83  NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELA 142

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L S
Sbjct: 143 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTS 202

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 203 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 260

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 261 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 301



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 79/141 (56%), Gaps = 3/141 (2%)

Query: 233 LRELRVDYNRLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           L EL V +NRL AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  
Sbjct: 5   LTELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRLTH 64

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P+SL   + L  +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L+
Sbjct: 65  LPDSLSCLSRLRTLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALK 122

Query: 352 VLRVQENPLEVPPRNIVEMGA 372
           +L +    L   P    E+ +
Sbjct: 123 ILWLSGAELGTLPAGFCELAS 143



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 102/203 (50%), Gaps = 11/203 (5%)

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELR---VDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L +L V  N L  L   +   S+LRELR   + +N+L ALP  +G +  LE L V +N +
Sbjct: 5   LTELDVSHNRLTALGAEV--VSALRELRKLNLSHNQLPALPAQLGALARLEELDVSFNRL 62

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LP ++S LS LR LDV  N+L + P  L     L ++++ +N   LR LP  I  L  
Sbjct: 63  THLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSN--RLRGLPEDISALCA 120

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L+ L +S  ++  LP  F  L+ L  L +  N L+  P     +    ++   ++L+E+ 
Sbjct: 121 LKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEF 180

Query: 387 DAKTQPVKQKKSWVEMCFFSRSN 409
            A   P+    + +E  + SR+ 
Sbjct: 181 PAALLPL----AGLEELYLSRNQ 199


>gi|395541885|ref|XP_003772867.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Sarcophilus harrisii]
          Length = 1047

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 164/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++V +PA +G L  L++LD+  N++ +LP+++G L +L  LDL  
Sbjct: 215 LSALPQLRKLNLSHNQLVDLPAQLGTLGHLEELDVSFNKLPQLPEALGHLRALRTLDLDH 274

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+  N L  LP+ IG+L +LK L +   +L  LP    Q +
Sbjct: 275 NQLTAFPPQLLQLATLEELDVSGNRLRGLPEEIGTLRALKILWLSGAELGTLPSGFCQLA 334

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L +L++  N  +  P  +  L+SL EL +S N L +
Sbjct: 335 SLESLMLDSNGLQALPAQFSRLQQLRMLNLSSNLFEDFPGALLPLASLEELYLSRNRLTA 394

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 395 VPALVSGLSKLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 452

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + +V++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 453 LWKVKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 493



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 105/192 (54%), Gaps = 8/192 (4%)

Query: 187 LEELDLGSNNLSSLPD----SIGSLISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYN 241
           +E L+LG+N L  LP     ++GSL  L+ L++  N L  LP  +GQ  + L EL V +N
Sbjct: 146 VEVLNLGNNALDELPTGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGARLTELDVSHN 205

Query: 242 RLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           RL A+  E +  +  L  L++ +N +  LP  + +L  L ELDVSFN+L  +PE+L    
Sbjct: 206 RLGAVTAEVLSALPQLRKLNLSHNQLVDLPAQLGTLGHLEELDVSFNKLPQLPEALGHLR 265

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ +N   L A P  +  L  LEELD+S N++R LP+    L  L++L +    L
Sbjct: 266 ALRTLDLDHN--QLTAFPPQLLQLATLEELDVSGNRLRGLPEEIGTLRALKILWLSGAEL 323

Query: 361 EVPPRNIVEMGA 372
              P    ++ +
Sbjct: 324 GTLPSGFCQLAS 335


>gi|383422865|gb|AFH34646.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
 gi|387540264|gb|AFJ70759.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
          Length = 1052

 Score =  171 bits (432), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 165/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|223949627|gb|ACN28897.1| unknown [Zea mays]
          Length = 502

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 141/229 (61%), Gaps = 1/229 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L +N+L SLPD+IG L +LK 
Sbjct: 211 HLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 270

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL V YN L  LP  +G  +  L  L +  N ++ LP+
Sbjct: 271 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 330

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P      + L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 331 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 390

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +SNNQI  LPD+F  L +L  L +++NPL +PP +IV  G  AV +YM+
Sbjct: 391 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMS 439



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 6/179 (3%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRII 152
           +L + N   + +  LPDSI K  SLV L++S N +  +P  IG  L +L+KL +H N++ 
Sbjct: 267 NLKILNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLR 326

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISL 210
            LP S+ ++ SL  LD   N++  LP    +L  LE L+L SN  +L  LP S G L++L
Sbjct: 327 SLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNL 386

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTLEVLSVRYNNI 266
           ++L +  N +  LP T G+   L +L ++ N L   PE +   G     E +S R+ +I
Sbjct: 387 RELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKRWLDI 445



 Score = 44.7 bits (104), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   LNL +   D ++ LP S G L +L  LDLS N+I A+P T G L  L+KL+L  N 
Sbjct: 360 GLEILNLSSNFSD-LKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNP 418

Query: 151 IIELP--------DSIGDLLSLVYLDL 169
           ++  P        D++ + +S  +LD+
Sbjct: 419 LVMPPEDIVNKGVDAVKEYMSKRWLDI 445



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP   GKLS L  L+LS N   +  +P + G L +L++LDL  N+
Sbjct: 336 RSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQ 395

Query: 151 IIELPDSIGDLLSLVYLDLRGN 172
           I  LPD+ G L  L  L+L  N
Sbjct: 396 IHALPDTFGRLDKLEKLNLEQN 417


>gi|226502182|ref|NP_001149497.1| LOC100283123 [Zea mays]
 gi|195627564|gb|ACG35612.1| protein lap1 [Zea mays]
          Length = 502

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/229 (43%), Positives = 141/229 (61%), Gaps = 1/229 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP++ G +L L  LD+  NQ+  +P A+  L  LEEL L +N+L SLPD+IG L +LK 
Sbjct: 211 HLPEAFGRILGLRVLDVSRNQLEVIPDAIGGLGHLEELFLTANDLVSLPDTIGLLSNLKI 270

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L V +N L  LP +I +C SL EL V YN L  LP  +G  +  L  L +  N ++ LP+
Sbjct: 271 LNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLRSLPS 330

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           ++  + SL  LD  FNEL  +P      + L  +N+ +NF+DL+ LP S G+L  L ELD
Sbjct: 331 SVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELD 390

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +SNNQI  LPD+F  L +L  L +++NPL +PP +IV  G  AV +YM+
Sbjct: 391 LSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMS 439



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 6/179 (3%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRII 152
           +L + N   + +  LPDSI K  SLV L++S N +  +P  IG  L +L+KL +H N++ 
Sbjct: 267 NLKILNVSSNRLRALPDSISKCRSLVELNVSYNGLTYLPTNIGYDLVNLRKLWIHMNKLR 326

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISL 210
            LP S+ ++ SL  LD   N++  LP    +L  LE L+L SN  +L  LP S G L++L
Sbjct: 327 SLPSSVCEMRSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNL 386

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTLEVLSVRYNNI 266
           ++L +  N +  LP T G+   L +L ++ N L   PE +   G     E +S R+ +I
Sbjct: 387 RELDLSNNQIHALPDTFGRLDKLEKLNLEQNPLVMPPEDIVNKGVDAVKEYMSKRWLDI 445



 Score = 44.7 bits (104), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 9/87 (10%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   LNL +   D ++ LP S G L +L  LDLS N+I A+P T G L  L+KL+L  N 
Sbjct: 360 GLEILNLSSNFSD-LKELPPSFGDLLNLRELDLSNNQIHALPDTFGRLDKLEKLNLEQNP 418

Query: 151 IIELP--------DSIGDLLSLVYLDL 169
           ++  P        D++ + +S  +LD+
Sbjct: 419 LVMPPEDIVNKGVDAVKEYMSKRWLDI 445



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 2/82 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP   GKLS L  L+LS N   +  +P + G L +L++LDL  N+
Sbjct: 336 RSLYLLDAHFNELCGLPSLFGKLSGLEILNLSSNFSDLKELPPSFGDLLNLRELDLSNNQ 395

Query: 151 IIELPDSIGDLLSLVYLDLRGN 172
           I  LPD+ G L  L  L+L  N
Sbjct: 396 IHALPDTFGRLDKLEKLNLEQN 417


>gi|297803494|ref|XP_002869631.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315467|gb|EFH45890.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 386

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/262 (44%), Positives = 154/262 (58%), Gaps = 4/262 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLS 198
           +LK LDL    +  L  S  +L S+  LDL  N I  +P +L +R++ L  LDL SN L 
Sbjct: 61  NLKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 120

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLE 257
           +LP+SIG L  LK L V  N L+ LP TI  C SL EL  ++N L  LP+A+G ++  L 
Sbjct: 121 TLPNSIGCLSKLKFLNVSGNYLQFLPKTIEDCRSLEELNANFNELTRLPDAIGFELKNLT 180

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            LSV  N +  LP ++S L+SLR LD   N L S+PE L     L  +N+  NF  L  L
Sbjct: 181 KLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNFQHLTTL 240

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P S+G L  L ELD+S N I VLPDS   L R++ L V+ NPL  PP  +VE G +A+ Q
Sbjct: 241 PYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLISPPFEVVEQGLEALKQ 300

Query: 378 YMADLVEKRDAKTQPVKQKKSW 399
           YM++ + +   KT P K KKSW
Sbjct: 301 YMSEKMTESYKKT-PAK-KKSW 320



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           ++ +  LP+ +  L +L  L++S+N   +  +P ++G L SL +LD+  N I  LPDS+G
Sbjct: 209 LNRLSSLPEDLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLG 268

Query: 160 DLLSLVYLDLRGNQISALP 178
            L  +  L + GN + + P
Sbjct: 269 CLRRIQKLSVEGNPLISPP 287


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/298 (35%), Positives = 178/298 (59%), Gaps = 7/298 (2%)

Query: 86  VSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++S    + LNL  NKL +    +P++I  L+ L  L LS N++  VP  I  LS L+ L
Sbjct: 85  IASLSQLQTLNLIYNKLTE----VPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTL 140

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L+ N++ E+P++I  L  L  L+L  NQ++ +P  ++ L +LE L L +N L  +P++I
Sbjct: 141 NLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAI 200

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            SL  L++L +  N+L  +P  I   S LR L +  N+L  LPEA+  +  L+ L +  N
Sbjct: 201 ASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGN 260

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  ++SL+ L+EL +  NEL +VPE++   T L ++++ +N  +L A+P +I +L
Sbjct: 261 QLTELPEAIASLTQLQELYLVGNELTAVPEAIASLTQLQRLSLSDN--ELTAVPEAIASL 318

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
             L+ LD+S NQ+  +P++   LS+L+ L + +NPL        E G +AV +Y+ D+
Sbjct: 319 THLQGLDLSYNQLTQVPEAIASLSQLQELYLDDNPLNPDLAAAYEQGIEAVKEYLLDI 376



 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 168/287 (58%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE + ++G   L+L    M+  E +P++I  L+ L  LDL  N++  VP  I  LS L+ 
Sbjct: 14  IEKAQQEGATKLDL--GYMELTE-VPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQI 70

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N++ E+P++I  L  L  L+L  N+++ +P A++ L +L++L L +N L+ +P++
Sbjct: 71  LNLSNNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEA 130

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I SL  L+ L +  N L E+P  I   S LR L + YN+L  +PE +  +  LE L +  
Sbjct: 131 IASLSQLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNN 190

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N ++++P  ++SL+ L+ L +S NEL +VPE++   + L  +N+ NN   L  LP +I +
Sbjct: 191 NQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNN--QLTELPEAIAS 248

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  L+EL +  NQ+  LP++   L++L+ L +  N L   P  I  +
Sbjct: 249 LTQLQELYLVGNQLTELPEAIASLTQLQELYLVGNELTAVPEAIASL 295


>gi|22328943|ref|NP_194335.2| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
 gi|20260486|gb|AAM13141.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|30725612|gb|AAP37828.1| At4g26050 [Arabidopsis thaliana]
 gi|332659749|gb|AEE85149.1| plant intracellular ras group-related LRR 8 [Arabidopsis thaliana]
          Length = 383

 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/262 (44%), Positives = 154/262 (58%), Gaps = 4/262 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLS 198
           ++K LDL    +  L  S  +L S+  LDL  N I  +P +L +R++ L  LDL SN L 
Sbjct: 58  NIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 117

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLE 257
           +LP+SIG L  LK L V  N L+ LP TI  C SL EL  ++N L  LP+A+G ++  L 
Sbjct: 118 TLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTNLT 177

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            LSV  N +  LP ++S L+SLR LD   N L S+PE L     L  +N+  NF  L  L
Sbjct: 178 KLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNFQHLTTL 237

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P S+G L  L ELD+S N I VLPDS   L R++ L V+ NPL  PP  +VE G +A+ Q
Sbjct: 238 PYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLISPPFEVVEQGLEALKQ 297

Query: 378 YMADLVEKRDAKTQPVKQKKSW 399
           YM++ + +   KT P K KKSW
Sbjct: 298 YMSEKMTESYKKT-PTK-KKSW 317



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           ++ +  LP+ +  L +L  L++S+N   +  +P ++G L SL +LD+  N I  LPDS+G
Sbjct: 206 LNRLSSLPEDLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLG 265

Query: 160 DLLSLVYLDLRGNQISALP 178
            L  +  L + GN + + P
Sbjct: 266 CLRRIQKLSVEGNPLISPP 284


>gi|4538934|emb|CAB39670.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|7269456|emb|CAB79460.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868158|gb|AAW57417.1| plant intracellular Ras-group-related LRR protein 8 [Arabidopsis
           thaliana]
          Length = 382

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/262 (44%), Positives = 154/262 (58%), Gaps = 4/262 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLS 198
           ++K LDL    +  L  S  +L S+  LDL  N I  +P +L +R++ L  LDL SN L 
Sbjct: 57  NIKTLDLSGMSLASLSASSINLASISKLDLSNNNIQKIPESLVARMLNLWALDLQSNQLK 116

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLE 257
           +LP+SIG L  LK L V  N L+ LP TI  C SL EL  ++N L  LP+A+G ++  L 
Sbjct: 117 TLPNSIGCLSKLKFLNVSGNYLQSLPKTIEDCRSLEELNANFNELTRLPDAIGFELTNLT 176

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            LSV  N +  LP ++S L+SLR LD   N L S+PE L     L  +N+  NF  L  L
Sbjct: 177 KLSVNSNKLVLLPNSVSYLTSLRVLDARLNRLSSLPEDLENLVNLQVLNVSQNFQHLTTL 236

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P S+G L  L ELD+S N I VLPDS   L R++ L V+ NPL  PP  +VE G +A+ Q
Sbjct: 237 PYSVGLLISLVELDVSYNGITVLPDSLGCLRRIQKLSVEGNPLISPPFEVVEQGLEALKQ 296

Query: 378 YMADLVEKRDAKTQPVKQKKSW 399
           YM++ + +   KT P K KKSW
Sbjct: 297 YMSEKMTESYKKT-PTK-KKSW 316



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 2/79 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           ++ +  LP+ +  L +L  L++S+N   +  +P ++G L SL +LD+  N I  LPDS+G
Sbjct: 205 LNRLSSLPEDLENLVNLQVLNVSQNFQHLTTLPYSVGLLISLVELDVSYNGITVLPDSLG 264

Query: 160 DLLSLVYLDLRGNQISALP 178
            L  +  L + GN + + P
Sbjct: 265 CLRRIQKLSVEGNPLISPP 283


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/272 (39%), Positives = 164/272 (60%), Gaps = 3/272 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           KL DN +  LP  IG+L SLV L L  N + ++PA IG L+SL   +L+ N++ ELP  I
Sbjct: 59  KLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEI 118

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L SL  L+L  N ++ LP  + +L  L EL L  N L+S+P  IG L SL +L +E N
Sbjct: 119 GQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDN 178

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L ELP  IGQ  SL EL+++ N L ++P  +G++ +L V ++ YN + +LP  +  L S
Sbjct: 179 MLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQLKS 238

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LREL++S N+L S+P  +    +LV++ + +N   L  LP  IG L+ L EL++ NN++ 
Sbjct: 239 LRELNLSNNQLTSLPAEIGQLKSLVELKLEDNM--LTELPAEIGQLKSLVELNLYNNRLT 296

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P     L+ L  L++++N L   P  I ++
Sbjct: 297 SVPAEIGQLTSLVELKLEDNMLTELPAEIGQL 328



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 163/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV      R +NL    ++ +  LP  IG+L+SL  L L  N + +VPA IG L++L +L
Sbjct: 2   EVGRLGALRTMNLG---VNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVEL 58

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N + ELP  IG L SLV L L GN+++++P  + +L  L   +L  N L+ LP  I
Sbjct: 59  KLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEI 118

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL++L +  N L  LP  IGQ +SL EL+++ N L ++P  +G++ +L  L +  N
Sbjct: 119 GQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDN 178

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  +  L SL EL +  NEL S+P  +   T+LV  N+  N+  L  LP  IG L
Sbjct: 179 MLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNL--NYNQLTELPAEIGQL 236

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L EL++SNNQ+  LP     L  L  L++++N L   P  I ++
Sbjct: 237 KSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQL 282



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/280 (39%), Positives = 154/280 (55%), Gaps = 28/280 (10%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R+LNL N   +++  LP  IG+L+SLV L L  N + +VPA IG L+SL +L
Sbjct: 117 EIGQLKSLRELNLSN---NHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVEL 173

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGN-----------------------QISALPVAL 181
            L  N + ELP  IG L SLV L L GN                       Q++ LP  +
Sbjct: 174 KLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEI 233

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            +L  L EL+L +N L+SLP  IG L SL +L +E N L ELP  IGQ  SL EL +  N
Sbjct: 234 GQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLTELPAEIGQLKSLVELNLYNN 293

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           RL ++P  +G++ +L  L +  N + +LP  +  L SLREL +  N L SVP  +   T+
Sbjct: 294 RLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEIGQLTS 353

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L ++++  N  +L ++P  IG L  L EL +  NQ+  LP
Sbjct: 354 LTELDLRCN--ELTSVPAEIGQLTSLTELVLHKNQLTSLP 391



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
           A +G L +L+ ++L  N++  LP  IG L SL  L L GN+++++P  + +L  L EL L
Sbjct: 1   AEVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKL 60

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N L+ LP  IG L SL +L +E N+L  +P  IGQ +SL    ++YN+L  LP  +G+
Sbjct: 61  EDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQ 120

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           + +L  L++  N++  LP  +  L+SL EL +  NEL SVP  +    +LV++ + +N  
Sbjct: 121 LKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNELTSVPAEIGQLASLVELKLEDNM- 179

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L  LP  IG L+ L EL +  N++  +P     L+ L V  +  N L   P  I ++
Sbjct: 180 -LTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELPAEIGQL 236



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 115/222 (51%), Gaps = 28/222 (12%)

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L  ++LG N L+SLP  IG L SL++L +E N+L  +P  IGQ ++L EL+++ 
Sbjct: 3   VGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLED 62

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N L  LP  +G+                       L SL EL +  NEL S+P  +    
Sbjct: 63  NMLTELPAEIGQ-----------------------LKSLVELKLEGNELTSMPAEIGQLA 99

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +LV  N+  N+  L  LP  IG L+ L EL++SNN + +LP     L+ L  L+++ N L
Sbjct: 100 SLVVSNL--NYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEGNEL 157

Query: 361 EVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
              P  I ++ +   ++   +++ +  A+   + Q KS VE+
Sbjct: 158 TSVPAEIGQLASLVELKLEDNMLTELPAE---IGQLKSLVEL 196


>gi|8698744|gb|AAF78502.1|AC012187_22 Contains similarity to CYR1 from Candida albicans gb|AB034965 and
           contains multiple Leucine Rich PF|00560 repeats
           [Arabidopsis thaliana]
          Length = 492

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/332 (36%), Positives = 174/332 (52%), Gaps = 54/332 (16%)

Query: 108 LPDSIGKL-----SSLVSLDLSENRIVAV--PATIGGLSSLKKLDLHANRIIELPDSIGD 160
           L + IG++      SL   D     ++AV   A  GG+  ++++DL  + +  LPD++G 
Sbjct: 125 LEEEIGRVYASAVESLSGGDEVNEEVLAVIKDAEDGGV--VERIDLSDHELKLLPDALGK 182

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           ++ LV L++  N +  LP  +S L +LEELDL SN L  LPDSIG L++L+ L V  N L
Sbjct: 183 IVGLVSLNVSRNNLRFLPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKL 242

Query: 221 EELPHTIGQC----------------------------SSLRELRVDYNRLKALPEAVG- 251
             LP +I QC                             SL EL   +N L +LP   G 
Sbjct: 243 TLLPESIAQCRFCAFTFVHLSFQLSLLPNSEERYVLVIRSLVELDASFNNLTSLPANFGY 302

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            +  LE LS++ N I+  P ++  + SLR LD   NE+  +P ++   T L  MN+ +NF
Sbjct: 303 GLLNLERLSIQLNKIRFFPNSICEMRSLRYLDAHMNEIHGLPIAIGRLTNLEVMNLSSNF 362

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           +DL  LP +I +L  L ELD+SNNQIRVLPDSF  L +L  L + +NPLE PP+ +V   
Sbjct: 363 SDLIELPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEYPPQEMVNQS 422

Query: 372 AQAVVQYMADLVEKRDAKTQPVKQKKSWVEMC 403
           A+AV ++M                +K W EM 
Sbjct: 423 AEAVREFM----------------RKRWEEMV 438


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  169 bits (429), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  L L  NR   +P  I  L +L+ L+L +NR   LP  IG+L  L  L
Sbjct: 219 LPKEIGKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKL 278

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L L  N L++LP  IG L SL++LI+  N L  +P  I
Sbjct: 279 SLAHNQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEI 338

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SL+ L +  N+L  LP+ +GK+ +L+ L +  N +  +P  +  L  L+ L +SFN
Sbjct: 339 GKLQSLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFN 398

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+++ NN   L  LP+ IGNL+ L+ELD+  NQ+  LP+    L
Sbjct: 399 QLTAIPKEIEKLQNLQKLHLRNN--QLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKL 456

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 457 QNLKDLYLNNNKLTTLPKEIGKL 479



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 152/271 (56%), Gaps = 12/271 (4%)

Query: 100 KLMDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K + N++WL          P  IG L  L  L L+ N++  +P  IG L SL++L L  N
Sbjct: 247 KKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGN 306

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           ++  LP  IG L SL  L L  NQ++ +P  + +L  L+ L L  N L++LP  IG L S
Sbjct: 307 QLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIGKLQS 366

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L++LI+  N L  +P  I Q   L+ L + +N+L A+P+ + K+  L+ L +R N +  L
Sbjct: 367 LQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNNQLTTL 426

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  + +L  L+ELD+ +N+L ++PE +     L  + + NN   L  LP+ IG L+ L++
Sbjct: 427 PKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNN--KLTTLPKEIGKLQKLKD 484

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           L ++NN++  LP     L +L+ L + +NP 
Sbjct: 485 LYLNNNKLTTLPKEIEKLQKLKNLHLADNPF 515



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I KL +L  L+L  NR   +P  IG L  L+KL L  N++  LP  IG L SL  L
Sbjct: 242 LPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRL 301

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ LP  + +L  L+EL LG N L+++P  IG L SL+ L +  N L  LP  I
Sbjct: 302 TLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEI 361

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SL+EL +  N+L  +P+ + ++  L+ LS+ +N +  +P  +  L +L++L +  N
Sbjct: 362 GKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQNLQKLHLRNN 421

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L ++++G  +  L ALP  IG L+ L++L ++NN++  LP     L
Sbjct: 422 QLTTLPKEIGNLQKLQELDLG--YNQLTALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKL 479

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 480 QKLKDLYLNNNKLTTLPKEIEKL 502



 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/325 (32%), Positives = 171/325 (52%), Gaps = 13/325 (4%)

Query: 54  FRNKVPIM---IMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLMDNI 105
           FRN   I+   ++C CC  +  EK     L   ++  +       G R+    N   D +
Sbjct: 68  FRNIGVILSTILLCFCCTIEAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSN---DPL 124

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IGKL +L  LDLS N++  +P  IG L +L+ L+L++N+   LP  I +L  L 
Sbjct: 125 WTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQ 184

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L L  NQ++ LP  + +L +L+EL L  N  ++LP  IG L  LK+L + +N    LP 
Sbjct: 185 KLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPK 244

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I +  +L+ L +D NR   LP+ +G +  L+ LS+ +N +  LP  +  L SL+ L + 
Sbjct: 245 EIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLW 304

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +    +L ++ +G N   L  +P+ IG L+ L+ L +  NQ+  LP    
Sbjct: 305 GNQLTTLPKEIGKLQSLQELILGKN--QLTTIPKEIGKLQSLQSLTLWGNQLTTLPKEIG 362

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L + +N L   P+ I ++
Sbjct: 363 KLQSLQELILGKNQLTTIPKEIWQL 387


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/265 (38%), Positives = 158/265 (59%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SLV L+L  NR+ +VPA IG L+SL+KL+L+ N++  +P  IG L  L  L
Sbjct: 88  VPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 147

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++++P  + +L  L ELDLG N L+SLP  I  L SL  L ++ N L  +P  I
Sbjct: 148 NLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLTSVPAEI 207

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL+ L +  N+L ++P  +G++ +LE L +  N +  +P  +  L+SL E+D+SFN
Sbjct: 208 GQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFN 267

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L SVP  +   T+L ++++  +   L  +P  IG L  L  L + NNQ+  +P     L
Sbjct: 268 RLTSVPAEIGQLTSLTELHL--HINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQL 325

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           + L  L +  N L   P  I ++ +
Sbjct: 326 TSLEWLGLGGNQLTSVPAEIGQLAS 350



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 146/240 (60%), Gaps = 2/240 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  +DLS NR+ +VPA IG L+SL +L LH N++  +P  IG L SLV L
Sbjct: 249 VPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRL 308

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++++P  + +L  LE L LG N L+S+P  IG L SL++L++  N L  +P  I
Sbjct: 309 RLDNNQLTSVPAEIGQLTSLEWLGLGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEI 368

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L ++ N L ++P  +G++ +L+ L +  N +  +P  +  L+SL+ L +  N
Sbjct: 369 GQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDN 428

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VP  +   T+L  + + +N   L +LP  IG L  +E LD+  N++  +P + R L
Sbjct: 429 QLTRVPAEIGQLTSLTVLGLNSN--QLSSLPAEIGQLTSVERLDLRCNELTSVPAAIREL 486



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 157/272 (57%), Gaps = 2/272 (0%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N   + +  +P  IG+L+ L  L+L  N++ +VPA IG L+SL +LDL  N++  LP  I
Sbjct: 125 NLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEI 184

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
             L SL  L L+GNQ++++P  + +L  L+ LDL +N L+S+P  IG L SL+KL ++ N
Sbjct: 185 WQLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNN 244

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  +P  IG+ +SL E+ + +NRL ++P  +G++ +L  L +  N + ++P  +  L+S
Sbjct: 245 QLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLAS 304

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  L +  N+L SVP  +   T+L  + +G N   L ++P  IG L  LE L +  NQ+ 
Sbjct: 305 LVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGN--QLTSVPAEIGQLASLERLLLYGNQLT 362

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P     L+ L  L +  N L   P  I ++
Sbjct: 363 SVPAEIGQLTSLEWLGLNGNILTSVPAEIGQL 394



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 115/338 (34%), Positives = 185/338 (54%), Gaps = 19/338 (5%)

Query: 41  LTDFLILQLGSIIFRNKVPIM------IMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRD 94
           LT    L LG    RNK+  +      +  + C+   G +L+ +  A + +++S KG   
Sbjct: 164 LTSLTELDLG----RNKLTSLPTEIWQLTSLTCLHLQGNQLTSVP-AEIGQLASLKG--- 215

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L N  + ++   P  IG+L+SL  L L  N++ +VPA IG L+SL ++DL  NR+  +
Sbjct: 216 LDLYNNQLTSV---PAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSV 272

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  IG L SL  L L  N+++ +P  + +L  L  L L +N L+S+P  IG L SL+ L 
Sbjct: 273 PAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLG 332

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  +P  IGQ +SL  L +  N+L ++P  +G++ +LE L +  N +  +P  + 
Sbjct: 333 LGGNQLTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIG 392

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L+SL+EL +  NEL SVP  +   T+L ++ +G+N   L  +P  IG L  L  L +++
Sbjct: 393 QLTSLKELYLHGNELTSVPAEIGQLTSLQRLYLGDN--QLTRVPAEIGQLTSLTVLGLNS 450

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           NQ+  LP     L+ +  L ++ N L   P  I E+ A
Sbjct: 451 NQLSSLPAEIGQLTSVERLDLRCNELTSVPAAIRELRA 488



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+LS+L  LDL  +++ +VPA IG L+SL+KL+L+ N++  +P  IG L  L  L
Sbjct: 19  VPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLERL 78

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L G++++++P  + +L  L EL+LG N L+S+P  IG L SL+KL +  N L  +P  I
Sbjct: 79  RLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEI 138

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ + L  L +D N+L ++P  +G++ +L  L +  N +  LPT +  L+SL  L +  N
Sbjct: 139 GQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGN 198

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +    +L  +++ NN   L ++P  IG L  LE+L + NNQ+  +P     L
Sbjct: 199 QLTSVPAEIGQLASLKGLDLYNN--QLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRL 256

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  + +  N L   P  I ++
Sbjct: 257 TSLTEVDLSFNRLTSVPAEIGQL 279



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 139/238 (58%), Gaps = 2/238 (0%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA IG LS+L++LDL+ +++  +P  IG L SL  L+L  NQ++ +P  + +L  LE 
Sbjct: 18  AVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLER 77

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L LG + L+S+P  IG L SL +L +  N L  +P  IGQ +SL +L +  N+L  +P  
Sbjct: 78  LRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAE 137

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++  LE L++  N +  +P  +  L+SL ELD+  N+L S+P  +   T+L  +++  
Sbjct: 138 IGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQG 197

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N   L ++P  IG L  L+ LD+ NNQ+  +P     L+ L  LR+  N L   P  I
Sbjct: 198 N--QLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEI 253



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 100/185 (54%), Gaps = 2/185 (1%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           R+E L LGS    ++P  IG L +L++L +  + L  +P  IGQ +SL +L +  N+L  
Sbjct: 5   RVEVLGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTI 64

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +P  +G++  LE L +  + +  +P  +  L+SL EL++  N L SVP  +   T+L K+
Sbjct: 65  VPAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKL 124

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+  N   L  +P  IG L +LE L++  NQ+  +P     L+ L  L +  N L   P 
Sbjct: 125 NLYCN--QLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPT 182

Query: 366 NIVEM 370
            I ++
Sbjct: 183 EIWQL 187


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/263 (39%), Positives = 156/263 (59%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SL  L+L  NR+ ++PA IG L+SLK+L LH N++  LP  IG L SLV L
Sbjct: 194 LPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLASLVEL 253

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++++P  + +L  L+ L L  N L+SLP  IG L SL KL + TN L  LP  I
Sbjct: 254 NLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEI 313

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SLRELR+  N+L+++P  +G++ +L +L +  N +  +P  +  L+SL EL++  N
Sbjct: 314 GQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGN 373

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +    +L ++ +  N   L ++P  IG L  LE L +  NQ+  +P     L
Sbjct: 374 HLTSMPAEIGQLASLKRLFLHRN--QLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQL 431

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  N L   P  I ++
Sbjct: 432 TSLKRLLLDRNQLTSVPAEIGQL 454



 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 155/276 (56%), Gaps = 2/276 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SLV L+L  N++ +VPA IG L+SLK+L LH N++  LP  IG L SLV L
Sbjct: 240 LPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKL 299

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++++LP  + +L  L EL L  N L S+P  IG L SL  L +  N L  +P  I
Sbjct: 300 DLTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEI 359

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL EL +  N L ++P  +G++ +L+ L +  N +  +P  +  L+SL  L +  N
Sbjct: 360 GQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGN 419

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP      T+L ++ +  N   L ++P  IG L  LE L +  NQ+  +P     L
Sbjct: 420 QLMSVPAEAGQLTSLKRLLLDRN--QLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQL 477

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           + L  L +  N L   P  I ++GA     ++ D V
Sbjct: 478 TSLWTLHLGGNQLTSLPAAIRDLGAADCSVHLDDGV 513



 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 107/280 (38%), Positives = 164/280 (58%), Gaps = 6/280 (2%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL N   + +  LP  IG+L+SLV L+L  N++  +PA IG L+SL +L+L  NR+  
Sbjct: 113 ELNLGN---NRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTS 169

Query: 154 LPDSIGDLLSLVYLDLRGNQ-ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           LP  IG L SLV L+L  N  ++ LP  + +L  L EL+L +N L+SLP  IG L SLK+
Sbjct: 170 LPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKR 229

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ +SL EL +  N+L ++P  +G++ +L+ L +  N +  LP  
Sbjct: 230 LFLHRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAE 289

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SL +LD++ N+L S+P  +    +L ++ +  N   LR++P  IG L  L  LD+
Sbjct: 290 IGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGN--QLRSVPAEIGQLTSLTLLDL 347

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            NNQ+  +P     L+ L  L +  N L   P  I ++ +
Sbjct: 348 GNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLAS 387



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 110/294 (37%), Positives = 161/294 (54%), Gaps = 24/294 (8%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N + + +  LP  IG+L+SL  L L  N + ++PA IG L+SL  L L  + +  LP  I
Sbjct: 2   NLICNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEI 61

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVR----------------LEELD-----LGSNNL 197
           G L SLV LDL  NQ+++LP  + +L                  LEELD     LG+N L
Sbjct: 62  GQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRL 121

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           +SLP  IG L SL +L +E N L ELP  IGQ +SL EL +  NRL +LP  +G++ +L 
Sbjct: 122 TSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLV 181

Query: 258 VLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
            L++  N  + +LP  +  L+SLREL++  N L S+P  +   T+L ++ +  N   L +
Sbjct: 182 ELNLDDNTPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRN--QLTS 239

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LP  IG L  L EL++  NQ+  +P     L+ L+ L +  N L   P  I ++
Sbjct: 240 LPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQL 293



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 145/247 (58%), Gaps = 3/247 (1%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N++ ++PA IG L+SLK+L LH N +  LP  IG L SL  L L  +++++LP  + +L 
Sbjct: 6   NQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLA 65

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L ELDL  N L+SLP  IG L SL KL + T  LEE P  + +  S  EL +  NRL +
Sbjct: 66  SLVELDLSYNQLTSLPAEIGQLTSLVKLDL-TTWLEEPPSLLEELDS-WELNLGNNRLTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP  +G++ +L  L++ +N + +LP  +  L+SL EL++  N L S+P  +   T+LV++
Sbjct: 124 LPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIGQLTSLVEL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+ +N   L  LP  IG L  L EL++ NN++  LP     L+ L+ L +  N L   P 
Sbjct: 184 NLDDN-TPLTELPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFLHRNQLTSLPA 242

Query: 366 NIVEMGA 372
            I ++ +
Sbjct: 243 EIGQLAS 249



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 116/201 (57%), Gaps = 4/201 (1%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL SL  E+   +  R+L L    + ++   P  IG+L+SL  LDL  N++ ++PA IG 
Sbjct: 305 KLTSLPAEIGQLESLRELRLSGNQLRSV---PAEIGQLTSLTLLDLGNNQLTSMPAEIGQ 361

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L+SL +L+L  N +  +P  IG L SL  L L  NQ++++P  + +L  LE L LG N L
Sbjct: 362 LTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQL 421

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
            S+P   G L SLK+L+++ N L  +P  IGQ +SL  L +  N+L ++P  +G++ +L 
Sbjct: 422 MSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLW 481

Query: 258 VLSVRYNNIKQLPTTMSSLSS 278
            L +  N +  LP  +  L +
Sbjct: 482 TLHLGGNQLTSLPAAIRDLGA 502


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  169 bits (427), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 172/331 (51%), Gaps = 28/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLN---LQNKLMDNIEWLPDSIGKLSS 117
           +++C CC  +  EK     L   ++  +     DL      NKL      LP  IG L +
Sbjct: 78  ILLCFCCTIEADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTT----LPKEIGNLQN 133

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L  L+L  N++  +P  IG L  L+ LDL  NR+  LP  IG+L  L  LDL  NQ+  L
Sbjct: 134 LQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTL 193

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P  + +L +LE L LG+N L++LP  IG+L +L++L + +N    LP  IG    L++L 
Sbjct: 194 PKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLS 253

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           + ++RL  LP+ +G +  L+ L++  N    LP  + +L  L+ LD++++ L ++P+ + 
Sbjct: 254 LAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIG 313

Query: 298 FATTLVKMN------------IGN---------NFADLRALPRSIGNLEMLEELDISNNQ 336
               L K+N            IG          N  +L  LP+ IGNL+ L+EL + +NQ
Sbjct: 314 KLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQ 373

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +  LP+    L +L+ L +  N L+  P+ I
Sbjct: 374 LTTLPEKIGNLQKLQELSLAGNRLKTLPKEI 404



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 152/282 (53%), Gaps = 25/282 (8%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + ++ LP  I KL  L +L L  N +  +P  IG L +L++L+L++N+   LP+ IG+L
Sbjct: 187 QNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNL 246

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L L  ++++ LP  +  L  L+EL+L SN  ++LP+ IG+L  L+ L +  + L 
Sbjct: 247 QKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLT 306

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+   L++L +  N+LK LP+ +GK+  L+ LS+  N +  LP  + +L +L+E
Sbjct: 307 TLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQE 366

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG------------------- 322
           L +  N+L ++PE +     L ++++  N   L+ LP+ IG                   
Sbjct: 367 LSLGSNQLTTLPEKIGNLQKLQELSLAGN--RLKTLPKEIGNLQNLQELNLNNNQLTTLP 424

Query: 323 ----NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
               NL+ LE L++S N +   P+    L +L+ L +  NP 
Sbjct: 425 KEIENLQSLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPF 466



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 2/84 (2%)

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L ++P+ +     L ++N+  N   L  LP  IGNL+ L+ LD+S+N++  LP     
Sbjct: 119 NKLTTLPKEIGNLQNLQELNLEGN--QLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           L +L+ L + +N L+  P+ I ++
Sbjct: 177 LQKLQTLDLAQNQLKTLPKEIEKL 200


>gi|126330778|ref|XP_001373365.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Monodelphis domestica]
          Length = 1069

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/286 (38%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++  +PA +G L  L++LD+  NR+  LPD++G L +L  LDL  
Sbjct: 146 LSALPQLRKLNLSHNQLADLPAQLGSLGHLEELDVSFNRLPHLPDALGCLRALRTLDLDH 205

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELDL  N L  LP+ IG+L +LK L +   +L  LP    Q +
Sbjct: 206 NQLTAFPPQLLQLGTLEELDLSGNRLRGLPEEIGALRALKILWLSGAELGTLPSGFCQLA 265

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L +L++  N  +  P  +  L+SL EL +S N L +
Sbjct: 266 SLESLMLDSNGLQALPAQFSCLQQLRMLNLSSNCFEDFPGALLPLASLEELYLSRNRLTA 325

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 326 LPALVSRLSRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 383

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + +V++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 384 LWKVKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 424



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 104/192 (54%), Gaps = 8/192 (4%)

Query: 187 LEELDLGSNNLSSLP----DSIGSLISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYN 241
           +E L+LG+N L  LP     ++GSL  L+ L++  N L  LP  +GQ  + L EL V +N
Sbjct: 77  VEVLNLGNNALDELPAGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGARLTELDVSHN 136

Query: 242 RLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           RL A+  E +  +  L  L++ +N +  LP  + SL  L ELDVSFN L  +P++L    
Sbjct: 137 RLGAVAAEVLSALPQLRKLNLSHNQLADLPAQLGSLGHLEELDVSFNRLPHLPDALGCLR 196

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ +N   L A P  +  L  LEELD+S N++R LP+    L  L++L +    L
Sbjct: 197 ALRTLDLDHN--QLTAFPPQLLQLGTLEELDLSGNRLRGLPEEIGALRALKILWLSGAEL 254

Query: 361 EVPPRNIVEMGA 372
              P    ++ +
Sbjct: 255 GTLPSGFCQLAS 266


>gi|357485651|ref|XP_003613113.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
 gi|355514448|gb|AES96071.1| Leucine-rich-repeat protein-like protein [Medicago truncatula]
          Length = 456

 Score =  168 bits (426), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 102/269 (37%), Positives = 158/269 (58%), Gaps = 9/269 (3%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++K+D    ++   P+ +  +  LV ++   NQ+  +P +++ L +L ELD+ SN L SL
Sbjct: 152 VEKVDFSGMKLRIFPEGVEKMKGLVVINFANNQLQVIPDSITGLQKLAELDMSSNLLPSL 211

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PD IG L++LK L +  N L  LP +I  C SL EL V +N L  LP  +   +  LE L
Sbjct: 212 PDCIGLLVNLKVLNLSGNKLTTLPESISLCRSLVELDVSFNNLMCLPTNIAYGLVNLEKL 271

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S+  N I+ LP ++  + SLR LDV FNEL  +P+S+   T L  +NI +NF D+  LP 
Sbjct: 272 SIHLNKIRFLPLSIGEMKSLRYLDVHFNELHGLPQSIGKLTNLEYLNISSNFNDMTQLPE 331

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G L  L+ELD+SNNQIR LP +F  L +L  L + +NP+ VPP  ++  G +A+ ++M
Sbjct: 332 TVGGLVNLKELDLSNNQIRALPYAFCRLEKLTKLNLDQNPIIVPPLEVLNQGVEAMKEFM 391

Query: 380 A--------DLVEKRDAKTQPVKQKKSWV 400
           A        +  +K  A+TQ  + +  W+
Sbjct: 392 AKRWLEHIDEERQKNMAETQNQQAQTGWL 420



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 78/206 (37%), Positives = 130/206 (63%), Gaps = 3/206 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+ + K+  LV ++ + N++  +P +I GL  L +LD+ +N +  LPD IG L++L  L
Sbjct: 165 FPEGVEKMKGLVVINFANNQLQVIPDSITGLQKLAELDMSSNLLPSLPDCIGLLVNLKVL 224

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEELPHT 226
           +L GN+++ LP ++S    L ELD+  NNL  LP +I   L++L+KL +  N +  LP +
Sbjct: 225 NLSGNKLTTLPESISLCRSLVELDVSFNNLMCLPTNIAYGLVNLEKLSIHLNKIRFLPLS 284

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV--RYNNIKQLPTTMSSLSSLRELDV 284
           IG+  SLR L V +N L  LP+++GK+  LE L++   +N++ QLP T+  L +L+ELD+
Sbjct: 285 IGEMKSLRYLDVHFNELHGLPQSIGKLTNLEYLNISSNFNDMTQLPETVGGLVNLKELDL 344

Query: 285 SFNELESVPESLCFATTLVKMNIGNN 310
           S N++ ++P + C    L K+N+  N
Sbjct: 345 SNNQIRALPYAFCRLEKLTKLNLDQN 370



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/82 (39%), Positives = 48/82 (58%), Gaps = 2/82 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
            + +  LP SIGKL++L  L++S N   +  +P T+GGL +LK+LDL  N+I  LP +  
Sbjct: 298 FNELHGLPQSIGKLTNLEYLNISSNFNDMTQLPETVGGLVNLKELDLSNNQIRALPYAFC 357

Query: 160 DLLSLVYLDLRGNQISALPVAL 181
            L  L  L+L  N I   P+ +
Sbjct: 358 RLEKLTKLNLDQNPIIVPPLEV 379


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 155/251 (61%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L  L+L+ N++  +P  IG L +L+ L+L+ N++  LP  IG L 
Sbjct: 79  NQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLK 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP  + +L  L+ L+L +N L++LP+ IG L + + L++  N L  
Sbjct: 139 NLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTT 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +LREL ++ N+  A P+ +G++  L+ L++  N +K LP  +  L +LREL
Sbjct: 199 LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLREL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N+L+++   +     L  +++ +N   L+ LP+ IG L+ L+ LD++NNQ + +P+
Sbjct: 259 HLSYNQLKTLSAEIGQLQNLQVLDLNDN--QLKTLPKEIGQLKNLQVLDLNNNQFKTVPE 316

Query: 343 SFRMLSRLRVL 353
               L  L+VL
Sbjct: 317 EIGQLKNLQVL 327



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 87/266 (32%), Positives = 153/266 (57%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+L+ N++  +P  IG L +L+ L+L+ N++  LP  IG L +L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  NQ++ LP  + +L  L+ L+L +N L++LP  IG L +L+ L + TN L  LP
Sbjct: 118 QVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IGQ  + + L +  NRL  LP+ +G++  L  L +  N     P  +  L +L++L++
Sbjct: 178 EEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L+++P  +     L ++++   +  L+ L   IG L+ L+ LD+++NQ++ LP   
Sbjct: 238 YANQLKTLPNEIGQLQNLRELHLS--YNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEI 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L+VL +  N  +  P  I ++
Sbjct: 296 GQLKNLQVLDLNNNQFKTVPEEIGQL 321



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/285 (34%), Positives = 160/285 (56%), Gaps = 6/285 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  + L L N   + +  LP  IG+L +L  L+L  N++  +P  IG 
Sbjct: 126 QLATLPKEIGQLKNLQVLELNN---NQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQ 182

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L + + L L  NR+  LP  IG L +L  L L  NQ +A P  + +L  L++L+L +N L
Sbjct: 183 LQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQL 242

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
            +LP+ IG L +L++L +  N L+ L   IGQ  +L+ L ++ N+LK LP+ +G++  L+
Sbjct: 243 KTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQ 302

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL +  N  K +P  +  L +L+ LD+ +N+ ++V E +     L  + + NN   L+ L
Sbjct: 303 VLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNN--QLKTL 360

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
              IG L+ L+ L ++ NQ+  LP+  R L  LR L +  N L+ 
Sbjct: 361 SAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKT 405



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 166/334 (49%), Gaps = 48/334 (14%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  + L L N   + +  LP  IG+L +L  L+L+ N++  +P  IG 
Sbjct: 103 QLATLPKEIGQLKNLQVLELNN---NQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQ 159

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L+ L+L  N++  LP+ IG L +   L L  N+++ LP  + +L  L EL L +N  
Sbjct: 160 LKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQF 219

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++ P  IG L +L++L +  N L+ LP+ IGQ  +LREL + YN+LK L   +G++  L+
Sbjct: 220 TAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQ 279

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFA---- 312
           VL +  N +K LP  +  L +L+ LD++ N+ ++VPE +     L  +++G N F     
Sbjct: 280 VLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSE 339

Query: 313 ---------------------------------------DLRALPRSIGNLEMLEELDIS 333
                                                   L  LP  I  L+ L EL +S
Sbjct: 340 EIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLS 399

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            NQ++ L      L  L+ L +++N L   P+ I
Sbjct: 400 YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 433



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 118/222 (53%), Gaps = 10/222 (4%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L+L +N L++LP  IG L +L+ 
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQV 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ  +L+ L ++ N+L  LP+ +G++  L+VL +  N +  LP  
Sbjct: 97  LELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLC----FATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +  L +L+ L++  N+L ++PE +     F T ++  N       L  LP+ IG L+ L 
Sbjct: 157 IGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN------RLTTLPKEIGQLKNLR 210

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           EL ++ NQ    P     L  L+ L +  N L+  P  I ++
Sbjct: 211 ELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQL 252


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 162/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV      R L L +  + N+   P  IG+L+SLV+LDL  N++ +VPA IG L+SL +L
Sbjct: 23  EVGRLSALRVLYLNDNQLRNV---PAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVRL 79

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  +P  IG L SL  L L  NQ+ ++P  + +L  L  L L  N L+S+P  I
Sbjct: 80  DLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAEI 139

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL  L +  N L  +P  IGQ +SL EL ++ N+L ++P  +G++ +LE L +  N
Sbjct: 140 GQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAGN 199

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L SL EL++  N+L SVP  +   T+L ++ +  N   L ++P  IG L
Sbjct: 200 QLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNAN--QLTSVPAEIGQL 257

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LE L + NNQ+R +      L+ L+ L +++N L   P  I ++
Sbjct: 258 TSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQL 303



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 146/260 (56%), Gaps = 21/260 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +P  IG+L+SLV LDL  N++ +VPA IG L+SL  L L  N+++ +P  IG L 
Sbjct: 61  NQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLT 120

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL +L L  NQ++++P  + +L  L  L + +N L+S+P  IG L SL +L +  N L  
Sbjct: 121 SLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTS 180

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IGQ +SL +L +  N+L +LP  +G++ +L  L++  N +  +P  +  L+SL EL
Sbjct: 181 VPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTEL 240

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNN-----FAD----------------LRALPRSI 321
            ++ N+L SVP  +   T+L  + +GNN      A+                L +LP  I
Sbjct: 241 YLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEI 300

Query: 322 GNLEMLEELDISNNQIRVLP 341
           G L  L  L ++ NQ+  LP
Sbjct: 301 GQLTSLMMLHLNGNQLTSLP 320



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/241 (36%), Positives = 137/241 (56%), Gaps = 2/241 (0%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA +G LS+L+ L L+ N++  +P  IG L SLV LDL  NQ++++P  + +L  L  
Sbjct: 19  AVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVR 78

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL  N L+S+P  IG L SL  L +  N L  +P  IGQ +SL  L +  N+L ++P  
Sbjct: 79  LDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAE 138

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++ +L  L +  N +  +P  +  L+SL EL ++ N+L SVP  +   T+L K+++  
Sbjct: 139 IGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLTSVPAEIGQLTSLEKLDLAG 198

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L +LP  IG L  L EL++  NQ+  +P     L+ L  L +  N L   P  I +
Sbjct: 199 N--QLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYLNANQLTSVPAEIGQ 256

Query: 370 M 370
           +
Sbjct: 257 L 257



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 132/214 (61%), Gaps = 2/214 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L LS N++ +VPA IG L+SL  L +  N++  +P  IG L SL  L
Sbjct: 112 VPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTEL 171

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN+++++P  + +L  LE+LDL  N L+SLP  IG L+SL +L +  N L  +P  I
Sbjct: 172 YLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEI 231

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL EL ++ N+L ++P  +G++ +LE L +  N ++ +   +  L+SL+ L +  N
Sbjct: 232 GQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDN 291

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           +L S+P  +   T+L+ +++  N   L +LP  I
Sbjct: 292 KLTSLPAEIGQLTSLMMLHLNGN--QLTSLPAEI 323



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 2/106 (1%)

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +P  +  LS+LR L ++ N+L +VP  +   T+LV +++  N   L ++P  IG L  L 
Sbjct: 20  VPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHAN--QLTSVPAEIGQLTSLV 77

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
            LD+  NQ+  +P     L+ L  L +  N L   P  I ++ + A
Sbjct: 78  RLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLA 123


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  168 bits (425), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/360 (31%), Positives = 181/360 (50%), Gaps = 46/360 (12%)

Query: 54  FRNK---VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDL--------------- 95
           FRN    + I+++C CC  +  EK     L   ++  +     DL               
Sbjct: 64  FRNIGVILSIILLCFCCTIEADEKDKYYNLTEALQHPTDVRVLDLGPPEGGNKLTTLPKE 123

Query: 96  --NLQN----KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA 148
             NLQN     L  N    LP+ IG L  L +LDLS NR+  +P  IG L  L+ LDL  
Sbjct: 124 IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQ 183

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N++  LP  I  L  L  L L  N+++ LP  + +L +LE L LG+N L++LP  IG+L 
Sbjct: 184 NQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQ 243

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +L++L + +N    LP  IG    L++L + ++RL  LP+ +G +  L+ L++  N    
Sbjct: 244 NLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTT 303

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN------------------ 310
           LP  + +L  L++LD+++++L ++P+ +     L K+++  N                  
Sbjct: 304 LPEEIGNLQKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNL 363

Query: 311 ---FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
                +L  LP+ IGNL+ L+ELD+  NQ+  LP+    L +L+ L +  N L+  P+ I
Sbjct: 364 SLSHNELTTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEI 423



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 151/274 (55%), Gaps = 21/274 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I KL  L +L L  N +  +P  IG L +L++L+L++N+   LP+ IG+L  L  L
Sbjct: 212 LPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKL 271

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  ++++ LP  +  L  L+EL+L SN  ++LP+ IG+L  L+KL +  + L  LP  I
Sbjct: 272 SLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSQLTTLPKEI 331

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L++L +  N+LK LP+ +GK+  L+ LS+ +N +  LP  + +L +L+ELD+  N
Sbjct: 332 GKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNELTTLPKEIGNLQNLKELDLGGN 391

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADL--------------------RALPRSIGNLEM 326
           +L ++PE +     L ++ + GN    L                      LP+ IGNL+ 
Sbjct: 392 QLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQTLNLNNNQLTTLPKEIGNLQS 451

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           LE L++S N +   P+    L +L+ L +  NP 
Sbjct: 452 LESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPF 485



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 61/130 (46%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G +  L+ L++  N    LP  + +L  L+ LD+S N L +         
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTT--------- 165

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                           LP+ IGNL+ L+ LD++ NQ++ LP     L +L  L +  N L
Sbjct: 166 ----------------LPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNEL 209

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 210 TTLPKEIEKL 219


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 160/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  LDL  N++ +VPA IG L+SL +L L  N++  +P  IG L SL  L
Sbjct: 21  VPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGL 80

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ++++P  + +L  L EL L +N L+S+P  IG L SL++L ++ N L  +P  I
Sbjct: 81  DLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEI 140

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N+L ++P  +G++ +LE L+++ N +  +P  +  L+SL +L+++ N
Sbjct: 141 GQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGN 200

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L ++++  N   L ++P  IG L  L+EL + +NQ+  +P     L
Sbjct: 201 QLTSVPAEIGQLTSLKELDLNGN--QLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQL 258

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L V  N L   P  I ++
Sbjct: 259 ASLEKLYVGGNQLTSVPAEIGQL 281



 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/295 (36%), Positives = 168/295 (56%), Gaps = 22/295 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+L+SL  L L  NR+ +VPA IG L+SL++L L  NR+  +P  IG L SL  L
Sbjct: 90  VPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERL 149

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + RL  LEEL+L SN L+S+P  IG L SL+KL +  N L  +P  I
Sbjct: 150 YLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEI 209

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL+EL ++ N+L ++P  +G++  L+ L +R N +  +P  +  L+SL +L V  N
Sbjct: 210 GQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGN 269

Query: 288 ELESVPESLCFATTLVKMNIGNN------------------FAD---LRALPRSIGNLEM 326
           +L SVP  +   T+L  + + +N                  + D   L ++P  IG L  
Sbjct: 270 QLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTS 329

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           L EL +S NQ+  +P     L+ L+ L +++N L   P  I ++ +  V+ Y+ D
Sbjct: 330 LTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVL-YLDD 383



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           + L L  N + +VPA IG L+SL+ LDL+ N++  +P  IG L SL  L L GNQ++++P
Sbjct: 9   LELALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLTSVP 68

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L  L  LDL  N L+S+P  +G L SL++L +  N L  +P  IGQ +SL EL +
Sbjct: 69  AEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCL 128

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D NRL ++P  +G++ +LE L +  N +  +P  +  L+SL EL++  N+L SVP  +  
Sbjct: 129 DDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQ 188

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
             +L K+N+  N   L ++P  IG L  L+ELD++ NQ+  +P     L+ L+ L +++N
Sbjct: 189 LASLEKLNLNGN--QLTSVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDN 246

Query: 359 PLEVPPRNIVEMGA 372
            L   P  I ++ +
Sbjct: 247 QLTSVPAEIGQLAS 260



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L+L  N++ +VPA IG L+SL+KL+L+ N++  +P  IG L SL  L
Sbjct: 159 VPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSLKEL 218

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ++++P  + +L  L+EL L  N L+S+P  IG L SL+KL V  N L  +P  I
Sbjct: 219 DLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLTSVPAEI 278

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +D N+L ++P  + ++ +L VL +  N +  +P  +  L+SL EL +S N
Sbjct: 279 GQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSGN 338

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T L ++ + +N   L ++P  I  L  L  L + +N +  LP     L
Sbjct: 339 QLTSVPAEIGRLTELKELGLRDN--QLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQL 396

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L ++ N L   P  I ++
Sbjct: 397 TSLEELGLERNELTSVPAEIWQL 419



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 160/286 (55%), Gaps = 21/286 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L+L +N++ +VPA I  L+SL+ L L  N++  +P  IG L SL  L
Sbjct: 274 VPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTEL 333

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + RL  L+EL L  N L+S+P+ I  L SL+ L ++ N L+ELP  I
Sbjct: 334 YLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEI 393

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL EL ++ N L ++P  + ++ +L  L +  N +  +P  +  L+SL +L +S  
Sbjct: 394 GQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYLSGT 453

Query: 288 ELESVPESLCFATTL------------VKMNIGN---------NFADLRALPRSIGNLEM 326
           +L SVP  +   T+L            +   IG          N   L ++P  IG L  
Sbjct: 454 KLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTE 513

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L+ELD+ +N++  +P+    L+ LRVL + +N L   P  I E+ A
Sbjct: 514 LKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAAIRELKA 559



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 98/288 (34%), Positives = 163/288 (56%), Gaps = 5/288 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      ++L+L    + ++   P  IG+L+ L  L L +N++ +VPA IG L+SL+KL
Sbjct: 208 EIGQLTSLKELDLNGNQLTSV---PADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKL 264

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +  N++  +P  IG L SL  L+L  NQ++++P  + +L  L  L L  N L+S+P  I
Sbjct: 265 YVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEI 324

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL +L +  N L  +P  IG+ + L+EL +  N+L ++PE + ++ +L VL +  N
Sbjct: 325 GQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDN 384

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  +  L+SL EL +  NEL SVP  +   T+L ++ +G N   L ++P  IG L
Sbjct: 385 LLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCN--QLTSVPAEIGQL 442

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L +L +S  ++  +P     L+ LRVL +  N L   P  I ++ +
Sbjct: 443 TSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLAS 490



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 3/186 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L L + L+D    LP  IG+L+SL  L L  N + +VPA I  L+SL +L L  N++ 
Sbjct: 377 RVLYLDDNLLDE---LPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLT 433

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            +P  IG L SL  L L G +++++P  + +L  L  L L  N L+SLP  IG L SL++
Sbjct: 434 SVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRE 493

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +    L  +P  IGQ + L+EL +  N+L ++PE + ++ +L VL +  N +  +P  
Sbjct: 494 LYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQLTSVPAA 553

Query: 273 MSSLSS 278
           +  L +
Sbjct: 554 IRELKA 559


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  168 bits (425), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 174/319 (54%), Gaps = 7/319 (2%)

Query: 54  FRNK---VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDN--IEWL 108
           FRN    + I+++C CC  +  EK     L   ++  +     DL  + +   N  +  L
Sbjct: 101 FRNIGVILSIILLCFCCTIEAKEKGVYYNLTEALQHPTDIQYLDLGPRERKNSNDPLWTL 160

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IGKL +L  LDLS N++  +P  IG L +L+KL+L  NR+  LP+ IG L +L  L 
Sbjct: 161 PKEIGKLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELH 220

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  N+++ LP  + +L  L+ L+LG N L++LP  IG+L  L++L +  N    LP  IG
Sbjct: 221 LTRNRLANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIG 280

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           +   L+EL +  N+L  LP+ + K+  L+ L +  N +  LP  +  L +L+ L ++ N+
Sbjct: 281 KLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQ 340

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L ++P+ +     L  +++ NN   L  LP+ IG L+ L+ L +SNNQ+  LP     L 
Sbjct: 341 LTTLPKEIGKLQKLEALHLENN--QLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQ 398

Query: 349 RLRVLRVQENPLEVPPRNI 367
            L+ L ++ N L   P+ I
Sbjct: 399 HLQELHLENNQLTTLPKEI 417



 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 158/283 (55%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL    + N   LP+ IGKL +L  L L+ NR+  +P  IG L +L+ L
Sbjct: 186 EIGKLQNLQKLNLTRNRLAN---LPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQIL 242

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG+L  L  L L  NQ + LP A+ +L +L+ELDLG N L++LP  I
Sbjct: 243 NLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEI 302

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L++L + +N L  LP  I +  +L+ L ++ N+L  LP+ +GK+  LE L +  N
Sbjct: 303 EKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENN 362

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +S N+L ++P+ +     L ++++ NN   L  LP+ IG L
Sbjct: 363 QLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENN--QLTTLPKEIGKL 420

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L+EL +  N++  LP+    L +L+ L    N     P  I
Sbjct: 421 QNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEI 463



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 152/260 (58%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +IGKL  L  LDL  N++  +P  I  L  L++L L++NR+  LP+ I  L +L +L
Sbjct: 275 LPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWL 334

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +LE L L +N L++LP  IG L +L+ L +  N L  LP  I
Sbjct: 335 GLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEI 394

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+EL ++ N+L  LP+ +GK+  L+ L + YN +  LP  +  L  L++L  S N
Sbjct: 395 GKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGN 454

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  +VPE +     L  +N+ +N   L +LP+ IGNL+ L+ L +S+NQ+  LP     L
Sbjct: 455 QFTTVPEEIWNLQNLQALNLYSN--QLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKL 512

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L + +N L   P+ I
Sbjct: 513 QNLQLLYLSDNQLTTLPKEI 532



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 148/266 (55%), Gaps = 2/266 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP  I KL  L  L L  NR+  +P  I  L +L+ L L+ N++  LP  IG L
Sbjct: 292 INQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKL 351

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L L  NQ++ LP  + +L  L+ L L +N L++LP  IG L  L++L +E N L 
Sbjct: 352 QKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLT 411

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L+ELR+DYNRL  LPE + K+  L+ L    N    +P  + +L +L+ 
Sbjct: 412 TLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQA 471

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L++  N+L S+P+ +     L  + + +N   L  LP+ IG L+ L+ L +S+NQ+  LP
Sbjct: 472 LNLYSNQLTSLPKEIGNLQNLQLLYLSDN--QLATLPKEIGKLQNLQLLYLSDNQLTTLP 529

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNI 367
                L  L+ L +++N L   P+ I
Sbjct: 530 KEIGKLQNLQELYLRDNQLTTLPKEI 555



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 146/268 (54%), Gaps = 12/268 (4%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N++WL          P  IGKL  L  L L  N++  +P  IG L +L++L L  NR+
Sbjct: 374 LQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRL 433

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP+ I  L  L  L   GNQ + +P  +  L  L+ L+L SN L+SLP  IG+L +L+
Sbjct: 434 TTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQ 493

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L  LP  IG+  +L+ L +  N+L  LP+ +GK+  L+ L +R N +  LP 
Sbjct: 494 LLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPK 553

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            + +L +L+ L+++ N L ++P+ +     L  +N+ +N   L  LP  IG L+ L+ L 
Sbjct: 554 EIGNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHN--RLTTLPEEIGKLQNLQLLH 611

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + NNQ+  LP+    L  L+ L +  NP
Sbjct: 612 LDNNQLTTLPEEIGKLQNLKELDLVGNP 639



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++  +P  IG L  L++L L  N++  LP  IG L +L  L
Sbjct: 367 LPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQEL 426

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP  + +L +L++L    N  +++P+ I +L +L+ L + +N L  LP  I
Sbjct: 427 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEI 486

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L +  N+L  LP+ +GK+  L++L +  N +  LP  +  L +L+EL +  N
Sbjct: 487 GNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDN 546

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L  LP+ IGNL+ L+ L++++N++  LP+    L
Sbjct: 547 QLTTLPKEIGNLQNLQVLNLNHN--RLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKL 604

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P  I
Sbjct: 605 QNLQLLHLDNNQLTTLPEEI 624



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 5/251 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L+L+N   + +  LP  IGKL +L  L L  NR+  +P  I  L  LKKL
Sbjct: 393 EIGKLQHLQELHLEN---NQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKL 449

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
               N+   +P+ I +L +L  L+L  NQ+++LP  +  L  L+ L L  N L++LP  I
Sbjct: 450 YSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEI 509

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP  IG+  +L+EL +  N+L  LP+ +G +  L+VL++ +N
Sbjct: 510 GKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHN 569

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  + +L +L+ L+++ N L ++PE +     L  +++ NN   L  LP  IG L
Sbjct: 570 RLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNN--QLTTLPEEIGKL 627

Query: 325 EMLEELDISNN 335
           + L+ELD+  N
Sbjct: 628 QNLKELDLVGN 638



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/223 (34%), Positives = 125/223 (56%), Gaps = 7/223 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I KL  L  L  S N+   VP  I  L +L+ L+L++N++  LP  IG+L +L  L
Sbjct: 436 LPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLL 495

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L L  N L++LP  IG L +L++L +  N L  LP  I
Sbjct: 496 YLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEI 555

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L +++NRL  LP+ +G +  L+VL++ +N +  LP  +  L +L+ L +  N
Sbjct: 556 GNLQNLQVLNLNHNRLTTLPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNN 615

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +L ++PE +     L ++       DL   P  IG  E +++L
Sbjct: 616 QLTTLPEEIGKLQNLKEL-------DLVGNPSLIGQKEKIQKL 651


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  167 bits (424), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 105/269 (39%), Positives = 154/269 (57%), Gaps = 3/269 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + N E LP  IG+L +L  L LS N++  +P  IG L  +++L L  N++  LP  IG L
Sbjct: 49  LHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKL 108

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDL  N ++ LP  + +L  L ELDL +N L +LP  IG L +L++L ++ N L+
Sbjct: 109 KKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLK 168

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +LREL +D N+LK LP+ +GK+  L  L++  N +  LP  + +L +L E
Sbjct: 169 TLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGE 228

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  NEL ++P+ +     L    +G   A L  LP  IG L+ L EL++S NQI  LP
Sbjct: 229 LLLINNELTTLPKEIGKLKNLQVSYLG---ALLTTLPNDIGYLKSLRELNLSGNQITTLP 285

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L  L+VL + EN L   P+ I ++
Sbjct: 286 KDIGQLQNLQVLYLSENQLATLPKEIGQL 314



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/297 (34%), Positives = 164/297 (55%), Gaps = 27/297 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++   K  R+L+L N L+     LP  IG+L +L  LDL+ N++  +P  IG L +L++L
Sbjct: 104 DIGKLKKLRELDLTNNLLT---TLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLREL 160

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L L GNQ+  LP  + +L  L EL+L +N L++LP  I
Sbjct: 161 YLDNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDI 220

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCS----------------------SLRELRVDYNR 242
           G+L +L +L++  N+L  LP  IG+                        SLREL +  N+
Sbjct: 221 GNLKNLGELLLINNELTTLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQ 280

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           +  LP+ +G++  L+VL +  N +  LP  +  L +LRELD+S N++ ++P+ +    +L
Sbjct: 281 ITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSL 340

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            ++N+  N   L  LP+ IG L+ L EL++  NQI  +P     L  L+VL + + P
Sbjct: 341 RELNLSGNL--LTTLPKDIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395


>gi|110825984|ref|NP_004216.2| malignant fibrous histiocytoma-amplified sequence 1 [Homo sapiens]
 gi|296437367|sp|Q9Y4C4.2|MFHA1_HUMAN RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1;
           AltName: Full=Malignant fibrous histiocytoma-amplified
           sequence with leucine-rich tandem repeats 1
 gi|189442857|gb|AAI67810.1| Malignant fibrous histiocytoma amplified sequence 1 [synthetic
           construct]
          Length = 1052

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 162/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|4239895|dbj|BAA74737.1| MASL1 [Homo sapiens]
          Length = 1052

 Score =  167 bits (424), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 162/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|119585970|gb|EAW65566.1| malignant fibrous histiocytoma amplified sequence 1 [Homo sapiens]
          Length = 1052

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 162/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +LV LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  167 bits (424), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 147/237 (62%), Gaps = 2/237 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L +L+L +NR+ +VPA IG L+SL++L LH N +  +P  IG L SL  L
Sbjct: 141 VPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKVL 200

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+++LP  + RL  L+EL L  N L+SL   IG L +L+KL +  N L  +P  I
Sbjct: 201 GLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEI 260

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++LREL + +N+L ++P  VG+  +L+VLS+  N +  +P  +  L  L+ L +  N
Sbjct: 261 GQLTALRELYLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNN 320

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           +L SVP  +   T+L ++ + NN   L  +P  IG L  LE LD++ NQ+  LP + 
Sbjct: 321 QLTSVPAEIGQLTSLQELFLYNN--QLTRVPAEIGQLRSLERLDLNRNQLTRLPAAL 375



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 119/203 (58%), Gaps = 3/203 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L L N  + ++   P  IG+L+SL  L L  N++ ++PA IG L+SL++L L+ N++  L
Sbjct: 177 LRLHNNHLTSV---PAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSL 233

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
              IG L +L  L L  NQ++ +PV + +L  L EL L  N L+S+P  +G   SLK L 
Sbjct: 234 LAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLKVLS 293

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  +P  IGQ   L+ L +  N+L ++P  +G++ +L+ L +  N + ++P  + 
Sbjct: 294 LYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVPAEIG 353

Query: 275 SLSSLRELDVSFNELESVPESLC 297
            L SL  LD++ N+L  +P +LC
Sbjct: 354 QLRSLERLDLNRNQLTRLPAALC 376



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 104/171 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SL  L L+ N++ ++ A IG L++L+KL L  N++  +P  IG L +L  L
Sbjct: 210 LPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALREL 269

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ NQ++++P  + +   L+ L L +N L+S+P  IG L  LK L +  N L  +P  I
Sbjct: 270 YLQHNQLTSVPAEVGQHRSLKVLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEI 329

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           GQ +SL+EL +  N+L  +P  +G++ +LE L +  N + +LP  +  L +
Sbjct: 330 GQLTSLQELFLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKLRA 380



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 27/186 (14%)

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            R+V+LE    G     ++P  +G L +LK L +  N L  +P  IGQ +SL  LR+  N
Sbjct: 125 GRVVKLELERFGLT--GAVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNN 182

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
            L ++P  +G++ +L+VL +  N +  LP  +  L+SL+EL ++ N+L S          
Sbjct: 183 HLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTS---------- 232

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
                          L   IG L  LE+L +S NQ+  +P     L+ LR L +Q N L 
Sbjct: 233 ---------------LLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLT 277

Query: 362 VPPRNI 367
             P  +
Sbjct: 278 SVPAEV 283



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/100 (40%), Positives = 60/100 (60%), Gaps = 3/100 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + L+L N  + ++   P  IG+L  L  L L  N++ +VPA IG L+SL++L
Sbjct: 282 EVGQHRSLKVLSLYNNQLTSV---PAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQEL 338

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            L+ N++  +P  IG L SL  LDL  NQ++ LP AL +L
Sbjct: 339 FLYNNQLTRVPAEIGQLRSLERLDLNRNQLTRLPAALCKL 378


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 158/283 (55%), Gaps = 5/283 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N  + +   LP+S G L+SLV L+L  N + ++P + G L+SL  L L+ N +  L
Sbjct: 14  LNLGNHALTS---LPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALASL 70

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+S G L SL YL L  N +++LP +   L  L EL LG N L+SLP+S G L SL  L 
Sbjct: 71  PESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLY 130

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  LP + G+  SL  L +  N LK+LPE+ G +  L  L +  N +  LP +  
Sbjct: 131 LHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFG 190

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L  L  L++  N L S+PES     +LV + + +N   L +LP S G LE LE LD+++
Sbjct: 191 DLERLTTLNLYNNALASLPESFGDLASLVTLYLNDN--ALASLPESFGGLESLEHLDLND 248

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           N +  LP+SF  L+ L  L ++ N L   P +  ++ +   ++
Sbjct: 249 NALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLE 291



 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 115/307 (37%), Positives = 171/307 (55%), Gaps = 17/307 (5%)

Query: 76  SLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
           S   LASL+E         LNL N   + +  LP+S G L+SLV+L L++N + ++P + 
Sbjct: 27  SFGGLASLVE---------LNLYN---NALASLPESFGDLASLVTLFLNDNALASLPESF 74

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           GGL+SL+ L L+ N +  LP+S G L SLV L L GN +++LP +   L  L  L L +N
Sbjct: 75  GGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNN 134

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L+SLP+S G L SL  L + TN L+ LP + G  + L  L +  N L +LPE+ G +  
Sbjct: 135 ALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGDLER 194

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L++  N +  LP +   L+SL  L ++ N L S+PES     +L  +++ +N   L 
Sbjct: 195 LTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDN--ALA 252

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           +LP S G L  L  L + NN +  LP+SF  LS L  L ++ N L   P +    G +++
Sbjct: 253 SLPESFGGLASLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLTSLPESF--GGLESL 310

Query: 376 VQ-YMAD 381
           V  Y+ D
Sbjct: 311 VTLYLND 317



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 102/259 (39%), Positives = 143/259 (55%), Gaps = 3/259 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP+S G L+SL  L L  N + ++P + GGLSSL +L L  N +  LP+S G
Sbjct: 62  LNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFG 121

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           DL SLV L L  N +++LP +   L  L  L+L +N L SLP+S G L  L  L +  N 
Sbjct: 122 DLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENA 181

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP + G    L  L +  N L +LPE+ G + +L  L +  N +  LP +   L SL
Sbjct: 182 LASLPESFGDLERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESL 241

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             LD++ N L S+PES     +LV + + NN   L +LP S G+L  L  L++ NN +  
Sbjct: 242 EHLDLNDNALASLPESFGGLASLVTLYLRNN--ALASLPESFGDLSSLVTLELRNNTLTS 299

Query: 340 LPDSFRMLSRLRVLRVQEN 358
           LP+SF  L  L  L + +N
Sbjct: 300 LPESFGGLESLVTLYLNDN 318


>gi|395850250|ref|XP_003797708.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Otolemur garnettii]
          Length = 1052

 Score =  167 bits (423), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+P  +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLIAGLSRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LPT + +L+ L ELDVSFN L  +P+S    + L 
Sbjct: 125 TLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N+++ LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/258 (38%), Positives = 147/258 (56%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG L  L  LDLS N++ A+P  IG L +L+ LDL  N++  LP  IG L 
Sbjct: 219 NQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLK 278

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ + LP  + +L  L  L L +N L+ LP  IG L +L+ L + +N L  
Sbjct: 279 ELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTT 338

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L+EL +  N+L  LP+ +G++  L+VL +  N +  LP  +  L +L  L
Sbjct: 339 LPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVL 398

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N+L S+P+ +     L K+++ NN   L  LP  IG L+ L+EL +SNN+++ LPD
Sbjct: 399 YLSYNQLTSLPKDIGKLQNLQKLDLSNN--QLTTLPNEIGKLQNLQELYLSNNKLKTLPD 456

Query: 343 SFRMLSRLRVLRVQENPL 360
               L +LR L + + PL
Sbjct: 457 EIGKLQKLRTLDLDDIPL 474



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 158/297 (53%), Gaps = 24/297 (8%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N   + ++ LP  IGKL +L  L L  N++  +   IG L +L+ LDL  N++  L
Sbjct: 168 LNLTN---NQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTL 224

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  IG L  L  LDL  N+++ALP  + +L  L+ LDL  N L++LP  IG L  L+ L 
Sbjct: 225 PKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLH 284

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +E N    LP  IGQ  +LR L +  N+L  LP+ +GK+  L+VL +  N +  LP  + 
Sbjct: 285 LEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIG 344

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN---------------------FAD 313
            L  L+EL +S N+L ++P+ +     L  + + +N                     +  
Sbjct: 345 HLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQ 404

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L +LP+ IG L+ L++LD+SNNQ+  LP+    L  L+ L +  N L+  P  I ++
Sbjct: 405 LTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDEIGKL 461



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/323 (32%), Positives = 169/323 (52%), Gaps = 7/323 (2%)

Query: 48  QLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEW 107
           ++G+ IF     ++++C   + +  EK +   L   ++  +     DL     + + +  
Sbjct: 8   KIGTSIFLCLGALILLCFLDLCEAEEKGTYHNLTEALQNPTDVLILDL-----IGNQLTT 62

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  LDL  NRI  +P  IG L  L+KLDL  N++  LP  I  L   + L
Sbjct: 63  LPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKTLPKDIEQLQKPLVL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N  + LP  + +L  L+ L+L +N L +LP  I  L +L+ L +  N L+ LP  I
Sbjct: 123 HLNYNNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ LR+  N+L  L + +GK+  L+VL +  N +  LP  +  L  L++LD+S N
Sbjct: 183 GKLQNLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++  N   L  LP+ IG L+ L+ L + +NQ   LP     L
Sbjct: 243 KLTALPKDIGKLQNLQVLDLSGN--QLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             LRVL +  N L + P+ I ++
Sbjct: 301 QNLRVLYLYNNQLTILPKEIGKL 323



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 146/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N   LP  IGKL  L  L+L  N++  +P  I  L +L+ L+L  N++  LP  IG L 
Sbjct: 127 NNFTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQ 186

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N+++ L   + +L  L+ LDL +N L++LP  IG L  L+ L +  N L  
Sbjct: 187 NLQVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTA 246

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L+ L +  N+L  LP+ +G +  L+VL +  N    LP  +  L +LR L
Sbjct: 247 LPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVL 306

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L  +P+ +     L  + + +N   L  LP+ IG+L+ L+EL +SNNQ+  LP 
Sbjct: 307 YLYNNQLTILPKEIGKLQNLQVLYLHSN--QLTTLPKEIGHLKGLQELYLSNNQLTTLPK 364

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+VL +  N L   P+ I ++
Sbjct: 365 EIGELQNLQVLYLHSNQLTTLPKEIGQL 392



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L L N   + ++ LP  I +L +L  L+L+ N++  +P  IG L +L+ L
Sbjct: 135 EIGKLKELQGLELYN---NQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  L   IG L +L  LDL  NQ++ LP  +  L  L++LDL  N L++LP  I
Sbjct: 192 RLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP  IG    L+ L ++ N+   LP+ +G++  L VL +  N
Sbjct: 252 GKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +  N+L ++P+ +     L ++ + NN   L  LP+ IG L
Sbjct: 312 QLTILPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNN--QLTTLPKEIGEL 369

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L + +NQ+  LP     L  L VL +  N L   P++I ++
Sbjct: 370 QNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKL 415


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/308 (34%), Positives = 166/308 (53%), Gaps = 30/308 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LD+S N +  +P  IG L SLK+L+L  N +I LP+ IG L +L  L
Sbjct: 191 LPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEEL 250

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  LP  + +L  LE L L  N L +LP  IG+L  L+ L ++ N LE LP+ I
Sbjct: 251 NLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEI 310

Query: 228 GQCSSLRELRVDYNRL-----------------------KALPEAVGKIHTLEVLSVRYN 264
           G+  SL+ L +++N+L                         LP  +G++  L+ L++  N
Sbjct: 311 GKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENN 370

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K LP  +  L +L+ L++  N+L+++P  +     L  +N+ NN   L+ LP  IG L
Sbjct: 371 QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN--QLKTLPNEIGQL 428

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
           E L+ L++ NNQ++ LP+    L  L+ L ++ N L+  P    E+G    +QY+   +E
Sbjct: 429 ENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPN---EIGRLENLQYLN--LE 483

Query: 385 KRDAKTQP 392
               KT P
Sbjct: 484 NNQLKTLP 491



 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 170/306 (55%), Gaps = 28/306 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  +DL++ N   +++  LP+ IGKL SL  L+LS N ++ +P  IG L +L++L
Sbjct: 194 EIGQLENLQDLDVSN---NHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEEL 250

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L  L +L L  NQ+  LP  +  L +LE L L +N+L +LP+ I
Sbjct: 251 NLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEI 310

Query: 205 GSLISLKKLIVETNDL-----------------------EELPHTIGQCSSLRELRVDYN 241
           G L SLK+L +E N L                         LP+ IGQ  +L+ L ++ N
Sbjct: 311 GKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENN 370

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +LK LP  +G++  L+ L++  N +K LP  +  L +L+ L++  N+L+++P  +     
Sbjct: 371 QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLEN 430

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  +N+ NN   L+ LP  IG LE L+ L++ NNQ++ LP+    L  L+ L ++ N L+
Sbjct: 431 LQYLNLENN--QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYLNLENNQLK 488

Query: 362 VPPRNI 367
             P  I
Sbjct: 489 TLPNEI 494



 Score =  164 bits (415), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 166/307 (54%), Gaps = 28/307 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL N L+     LP+ IGKL +L  L+LS N++  +P  IG L  L+ L
Sbjct: 217 EIGKLRSLKRLNLSNNLLIT---LPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWL 273

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL------- 197
            L  N++I LP  IG L  L YL L+ N +  LP  + +L  L+ L L  N L       
Sbjct: 274 HLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEI 333

Query: 198 ----------------SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
                           ++LP+ IG L +L+ L +E N L+ LP+ IGQ  +L+ L ++ N
Sbjct: 334 GTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN 393

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +LK LP  +G++  L+ L++  N +K LP  +  L +L+ L++  N+L+++P  +     
Sbjct: 394 QLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLEN 453

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  +N+ NN   L+ LP  IG LE L+ L++ NNQ++ LP+    L  L+VL +  N L 
Sbjct: 454 LQYLNLENN--QLKTLPNEIGRLENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLV 511

Query: 362 VPPRNIV 368
             P+ IV
Sbjct: 512 TLPQEIV 518



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 150/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL  L  L+LS NR+  +P  IG L +L++LDL  NR+   P+ I  L  L +L
Sbjct: 53  LPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  +  L +L+ L L +N+L++LP  IG L  LK+L +  N L  LP  I
Sbjct: 113 YLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L +L ++ N+L  LP+ +G++  L+ L V  N++  LP  +  L SL+ L++S N
Sbjct: 173 GKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  +     L ++N+ NN   LR LP+ IG L+ LE L + +NQ+  LP     L
Sbjct: 233 LLITLPNEIGKLQNLEELNLSNN--QLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L  L ++ N LE  P  I
Sbjct: 291 QKLEYLYLKNNHLETLPNEI 310



 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 163/306 (53%), Gaps = 26/306 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L L  N +  +P+ IG L  LK+L L+ N ++ LP  IG L +L  L
Sbjct: 122 LPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQL 181

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L++LD+ +N+L++LP+ IG L SLK+L +  N L  LP+ I
Sbjct: 182 YLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEI 241

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL +  N+L+ LP+ +G++  LE L + +N +  LP  + +L  L  L +  N
Sbjct: 242 GKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNN 301

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
            LE++P  +    +L ++++ +N                        L  LP  IG LE 
Sbjct: 302 HLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLEN 361

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L+ L++ NNQ++ LP+    L  L+ L ++ N L+  P    E+G    +QY+   +E  
Sbjct: 362 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPN---EIGQLENLQYLN--LENN 416

Query: 387 DAKTQP 392
             KT P
Sbjct: 417 QLKTLP 422



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 142/232 (61%), Gaps = 2/232 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++E LP+ IGKL SL  L L  N+++ +P  IG L +L  L+L  N++  LP+ IG L 
Sbjct: 301 NHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLATLPNEIGQLE 360

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L YL+L  NQ+  LP  + +L  L+ L+L +N L +LP+ IG L +L+ L +E N L+ 
Sbjct: 361 NLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKT 420

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ  +L+ L ++ N+LK LP  +G++  L+ L++  N +K LP  +  L +L+ L
Sbjct: 421 LPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGRLENLQYL 480

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           ++  N+L+++P  +     L  +N+G N   L  LP+ I  L+ L+ L + N
Sbjct: 481 NLENNQLKTLPNEIGRLQNLKVLNLGGN--QLVTLPQEIVGLKHLQILKLKN 530



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 93/178 (52%), Gaps = 2/178 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL  N L++LP+ IG L  L+ L +  N L  LP+ IG+  +L EL + +NRL   P  
Sbjct: 43  LDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNE 102

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           + ++  L+ L +  N +  LP  + +L  L+ L +  N L ++P  +     L ++ + N
Sbjct: 103 IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYN 162

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N   L  LP+ IG L+ LE+L + +NQ+  LP     L  L+ L V  N L   P  I
Sbjct: 163 NH--LMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEI 218



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 2/153 (1%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L  LP+ IG+   L  L +  NRL  LP  +G++  LE L + +N +   P  +  L 
Sbjct: 48  NQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQ 107

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L+ L ++ N+L ++P+ +     L  + + NN   L  LP  IG L+ L+ L + NN +
Sbjct: 108 RLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNH--LATLPSEIGRLQRLKRLYLYNNHL 165

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP     L  L  L +++N L   P+ I ++
Sbjct: 166 MTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQL 198


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  167 bits (422), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/263 (38%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  L    N++ A+P  IG L +L+KLDL+ N++  +P  IG L +L  L
Sbjct: 113 LPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQEL 172

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+  +P    +L  L+ L L +N L +LP   G L SL+ L +  N L+ LP  I
Sbjct: 173 GLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEI 232

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+EL +  N+LK LP+ +GK+  L+VL + YN +K+LP     L SL++L +S  
Sbjct: 233 RKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNY 292

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P  +     L ++ + NN   L   P  IG L+ L EL +SNNQ++ LP     L
Sbjct: 293 QLTTFPNEIGELQNLTELYLSNN--QLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKL 350

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+VL +  N L   P  I E+
Sbjct: 351 KNLQVLILNNNQLTTIPNEIGEL 373



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 155/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R+L+  N   + ++ +P  IGKL +L  LDL+ N++  +P  IG L +L++L
Sbjct: 116 EIGKLKKLRELHSYN---NQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQEL 172

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  +P   G L SL  L L  NQ+  LP     L  L+ L L +N L +LP  I
Sbjct: 173 GLIGNQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEI 232

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L++L +  N L+ LP  IG+  +L+ L + YN+LK LP+  GK+ +L+ L +   
Sbjct: 233 RKLKKLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNY 292

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L +L EL +S N+L + P  +     L ++ + NN   L+ALP+ I  L
Sbjct: 293 QLTTFPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNN--QLQALPKKIEKL 350

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L ++NNQ+  +P+    L  L+VL +  N L   P  I E+
Sbjct: 351 KNLQVLILNNNQLTTIPNEIGELKNLQVLTLNNNQLTTIPNEIGEL 396



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 85/257 (33%), Positives = 132/257 (51%), Gaps = 2/257 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ +P   GKL SL  L LS N++  +P   G L SL+ L L  N++  LP  I  L 
Sbjct: 177 NQLKTIPKEFGKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLK 236

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ+  LP  + +L  L+ L L  N L  LP   G L SL+KL +    L  
Sbjct: 237 KLQELALYNNQLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTT 296

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P+ IG+  +L EL +  N+L   P  +G++  L  L +  N ++ LP  +  L +L+ L
Sbjct: 297 FPNEIGELQNLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVL 356

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+L ++P  +     L  + + NN   L  +P  IG L+ L EL++S NQ++ LP 
Sbjct: 357 ILNNNQLTTIPNEIGELKNLQVLTLNNN--QLTTIPNEIGELKNLRELNLSRNQLQALPK 414

Query: 343 SFRMLSRLRVLRVQENP 359
               L  L+ L + + P
Sbjct: 415 EIGHLKNLQELYLDDIP 431



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 92/155 (59%), Gaps = 2/155 (1%)

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + +N L  LP  IG+   LREL    N+LKA+P+ +GK+  L+ L + +N +K +P  
Sbjct: 103 LYLNSNQLITLPKEIGKLKKLRELHSYNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKE 162

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL +  N+L+++P+      +L  + + NN   L+ LP+  G+L+ L+ L +
Sbjct: 163 IGKLQNLQELGLIGNQLKTIPKEFGKLKSLQVLYLSNN--QLKTLPKEFGDLKSLQVLYL 220

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNNQ++ LP   R L +L+ L +  N L+  P+ I
Sbjct: 221 SNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEI 255



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 5/134 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P+ IG+L +L  L LS N++ A+P  I  L +L+ L L+ N++  +P+ IG+L 
Sbjct: 315 NQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELK 374

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ +P  +  L  L EL+L  N L +LP  IG L +L++L      L++
Sbjct: 375 NLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLKNLQELY-----LDD 429

Query: 223 LPHTIGQCSSLREL 236
           +P    Q   +R+L
Sbjct: 430 IPAWRSQEEKIRKL 443



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/177 (26%), Positives = 94/177 (53%), Gaps = 10/177 (5%)

Query: 233 LRELRVDYNRL-KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           L +L+ +  R+   L EA+     +++L +  N +  LP  +  L  LREL    N+L++
Sbjct: 76  LSQLKAEEKRIYHNLTEALQNPTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLKA 135

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P+ +     L K+++ +N   L+ +P+ IG L+ L+EL +  NQ++ +P  F  L  L+
Sbjct: 136 IPKEIGKLQNLQKLDLNHN--QLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQ 193

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSWVEMCFFS 406
           VL +  N L+  P+   ++ +  V+ Y+++       KT P  +++ K   E+  ++
Sbjct: 194 VLYLSNNQLKTLPKEFGDLKSLQVL-YLSN----NQLKTLPKEIRKLKKLQELALYN 245


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/281 (34%), Positives = 156/281 (55%), Gaps = 21/281 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+L EN++  +P  IG L  L+KLDL  N+I  LP  IG L SL  L
Sbjct: 52  LPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQEL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  +  L  L+ L LG N  ++LP+ IG L +L++L +  N L  LP  I
Sbjct: 112 NLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL ++ N+L ALP+ +GK+  L+ L +  N +  LP  + +L +L+ L++  N
Sbjct: 172 GNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKN 231

Query: 288 ELESVPESLCFATTLVKMNIGN---------------------NFADLRALPRSIGNLEM 326
           +L ++P+ +     L  +++GN                     N   L  +P+ IGNL+ 
Sbjct: 232 QLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQN 291

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+EL++S+NQ+  +P     L +L  L +  N L   P+ I
Sbjct: 292 LKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEI 332



 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 147/258 (56%), Gaps = 2/258 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  LP  IG+L SL  L+LS N++  +P  IG L  LK+L L  N+   LP+ IG L
Sbjct: 92  FNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKL 151

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  NQ++ LP  +  L  L+EL L  N L++LP  IG L +L+KL++  N L 
Sbjct: 152 QNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLT 211

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG   +L+ L +D N+L  LP+ +GK+  L+ L +  N +  LP  + +L  L+ 
Sbjct: 212 TLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKW 271

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L ++ N+L ++P+ +     L ++N+ +N   L  +P+ I NL+ LE LD+ NNQ+  LP
Sbjct: 272 LGLNKNQLTTIPKEIGNLQNLKELNLSSN--QLTTIPKEIENLQKLETLDLYNNQLTTLP 329

Query: 342 DSFRMLSRLRVLRVQENP 359
                L  L+ L +  NP
Sbjct: 330 KEIGKLQNLQDLYLGGNP 347



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 143/247 (57%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  +++A+P  IG L +LK+L+L  N++  LP  IG+L  L  LDL  N+I+ LP  
Sbjct: 42  LHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKITVLPKE 101

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL+L  N L++LP  IG+L  LK+L +  N    LP  IG+  +L+EL ++ 
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQELYLNE 161

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G +  L+ L +  N +  LP  +  L +L++L ++ N+L ++P  +    
Sbjct: 162 NQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQ 221

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+  N   L  LP+ IG L+ L+ L + NN++  LP     L +L+ L + +N L
Sbjct: 222 NLQGLNLDKN--QLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQKLKWLGLNKNQL 279

Query: 361 EVPPRNI 367
              P+ I
Sbjct: 280 TTIPKEI 286



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 126/226 (55%), Gaps = 2/226 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ L L+  ++I LP+ IG L +L  L+L  N+++ LP  +  L  L++LDLG N ++
Sbjct: 37  TQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQEIGNLQHLQKLDLGFNKIT 96

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L SL++L +  N L  LP  IG    L+ L +  N+  ALPE +GK+  L+ 
Sbjct: 97  VLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQE 156

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N +  LP  + +L +L+EL ++ N+L ++P+ +     L K+ +  N   L  LP
Sbjct: 157 LYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRN--QLTTLP 214

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
             IGNL+ L+ L++  NQ+  LP     L  L+ L +  N L   P
Sbjct: 215 IEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALP 260



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 107/206 (51%), Gaps = 5/206 (2%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +  L       L  AL    ++  L L    L +LP+ IG L +LK+L +  N L  LP 
Sbjct: 18  FYKLDAEDFHTLNEALQNPTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENKLTTLPQ 77

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG    L++L + +N++  LP+ +G++ +L+ L++ +N +  LP  + +L  L+ L + 
Sbjct: 78  EIGNLQHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLG 137

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+  ++PE +     L ++ +  N   L  LP+ IGNL+ L+EL ++ NQ+  LP    
Sbjct: 138 LNQFTALPEEIGKLQNLQELYLNEN--QLTTLPKEIGNLQNLQELYLNENQLTALPKEIG 195

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMG 371
            L  L+ L +  N L   P   +E+G
Sbjct: 196 KLQNLQKLVLNRNQLTTLP---IEIG 218


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 168/306 (54%), Gaps = 6/306 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 112 EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L ++P+ +     L ++ +  N   L  LP+ I  L
Sbjct: 289 RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTLPKEIEQL 346

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVVQYMADLV 383
           + L  LD+ NNQ+  LP     L  L+ L + EN L   P+ I ++   Q +  Y+  L 
Sbjct: 347 QNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 406

Query: 384 EKRDAK 389
            K   +
Sbjct: 407 SKEKKR 412



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 173/319 (54%), Gaps = 14/319 (4%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  +G+L +L  L+L+  ++  +P  IG L +L++LDL  N +  LP  +G L
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  N+++ LP+ + +L  L+ELDL SN L++LP  I  L +L++L +  N L 
Sbjct: 163 ENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT 222

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+ L +   +L  LP+ +G++  L+ L++  N +  LP  +  L +L  
Sbjct: 223 TLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEI 282

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N + ++P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP
Sbjct: 283 LVLRENRITALPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLP 340

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSW 399
                L  LRVL +  N L   P+   E+G    +Q +   +++    T P  ++Q K+ 
Sbjct: 341 KEIEQLQNLRVLDLDNNQLTTLPK---EIGQLQNLQELC--LDENQLTTFPKEIRQLKNL 395

Query: 400 VEMCFF-----SRSNKRKR 413
            E+  +     S+  KR R
Sbjct: 396 QELHLYLNPLSSKEKKRIR 414



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 159/279 (56%), Gaps = 7/279 (2%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  LDLS N +  +P  +G L +L++L+L++ ++
Sbjct: 70  LQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKL 129

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L +L  LDL  N ++ LP  + +L  L+ LDL  N L++LP  IG L +L+
Sbjct: 130 TTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  I Q  +L+EL +  N+L  LP+ +G++  L+ L++    +  LP 
Sbjct: 190 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK 249

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ L++  N+L ++P+ +     L  + +  N   + ALP+ IG L+ L+ LD
Sbjct: 250 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN--RITALPKEIGQLQNLQRLD 307

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  NQ+  LP     L  L+ L + EN L   P+ I ++
Sbjct: 308 LHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQL 346



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L++LDL  N +  LP  +G L +L  L
Sbjct: 63  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L +  N L  LP  I
Sbjct: 123 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+L  LP+ + ++  L+ L +  N +  LP  +  L +L+ L++   
Sbjct: 183 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVT 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L  LP+ IG L+ LE L +  N+I  LP     L
Sbjct: 243 QLTTLPKEIGELQNLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 301 QNLQRLDLHQNQLTTLPKEIGQL 323



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 139/248 (56%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  LDL  N ++ LP  + 
Sbjct: 55  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVG 114

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L+L S  L++LP  IG L +L++L +  N L  LP  +GQ  +L+ L +  NR
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR 174

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP  +G++  L+ L +  N +  LP  +  L +L+ELD+  N+L ++P+ +     L
Sbjct: 175 LATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNL 234

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             +N+      L  LP+ IG L+ L+ L++ +NQ+  LP     L  L +L ++EN +  
Sbjct: 235 KTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 292

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 293 LPKEIGQL 300



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L L   +++ LP  + +L  L+ LDLG N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  +GQ  +L+ L ++  +L  LP+ +G++  L+ L + +N++  LP  
Sbjct: 99  LDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ LD+  N L ++P  +     L ++++ +N   L  LP+ I  L  L+ELD+
Sbjct: 159 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN--KLTTLPKEIRQLRNLQELDL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             NQ+  LP     L  L+ L +    L   P+ I E+
Sbjct: 217 HRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGEL 254



 Score = 72.0 bits (175), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE    ++L   +     +R L +   +L  LP+ + ++  L++L + +N +  LP  + 
Sbjct: 32  VEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+SFN L ++P+ +     L ++N+  N   L  LP+ IG L  L+ELD+S 
Sbjct: 92  QLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSF 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N +  LP     L  L+ L + +N L   P  I ++
Sbjct: 150 NSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQL 185


>gi|297733709|emb|CBI14956.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/287 (40%), Positives = 168/287 (58%), Gaps = 10/287 (3%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           +V V     G   L+++DL   R+  LP++ G + SLV L+L  NQ+  +P +++ L  L
Sbjct: 103 VVGVLQEASG-KGLERVDLSGRRLRFLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENL 161

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           EEL+L SN L  LPDSIG L++LK L    N L  LP +I  C SL EL V +N L  LP
Sbjct: 162 EELNLSSNLLELLPDSIGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLP 221

Query: 248 EAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
             +G ++  L+ LS+  N I+ LPT++  + SL  LD  FNEL  +P ++   T L  +N
Sbjct: 222 TNIGYELVNLKRLSINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLN 281

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + +NF+DL  LP +IG+L  L ELD+SNNQI+ LPD+F  L  L  L + +NPL +PP  
Sbjct: 282 LSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPME 341

Query: 367 IVEMGAQAVVQYMAD-----LVEKRDAKTQPVKQKKSWVEMCFFSRS 408
           +V  G +AV  +MA      LVE+       VK++    E  + +RS
Sbjct: 342 VVNEGVEAVKVFMAKRWLDILVEEEQKSLLEVKEQ---TETGWLTRS 385



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/67 (44%), Positives = 46/67 (68%), Gaps = 2/67 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP +IG+L++L +L+LS N   +  +P TIG L++L++LDL  N+I  LPD+ G L +L 
Sbjct: 267 LPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDTFGRLDNLN 326

Query: 166 YLDLRGN 172
            L+L  N
Sbjct: 327 KLNLDQN 333



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           LNL +   D  E LP++IG L++L  LDLS N+I A+P T G L +L KL+L  N ++
Sbjct: 280 LNLSSNFSDLTE-LPETIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLV 336


>gi|168008240|ref|XP_001756815.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692053|gb|EDQ78412.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 444

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 143/246 (58%), Gaps = 1/246 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+  D     +   P S   + SL+ L+L  NQ+ ALP  +  LV L EL++ SN L S
Sbjct: 116 TLEHFDFSGKALKSFPRSWTAMSSLISLNLSNNQLEALPSDVGGLVNLVELNVHSNQLKS 175

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK-ALPEAVGKIHTLEV 258
           LPDSIG+L  L  L V  N L+ LP ++ +CS + EL   +N+L+  LP    K+  L  
Sbjct: 176 LPDSIGNLSKLTILNVSGNQLKTLPMSLSKCSKMLELNAHFNQLEIWLPVFGWKLAMLRK 235

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +++NN+  LP +   LS L  LD+S N L  +P S+   + L  +++  NF +L  LP
Sbjct: 236 LELQFNNLVTLPESFGYLSGLEHLDLSNNRLCCLPTSVGLLSHLKTLDLSRNFNNLCNLP 295

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S+GNL  L  LD+S NQIRVLP S   L  L+ L + +NPL VPP+ ++E   +AV+ Y
Sbjct: 296 HSLGNLTCLSTLDLSFNQIRVLPSSLGKLQNLKNLVLDQNPLTVPPKQVIEHSQEAVMAY 355

Query: 379 MADLVE 384
           + DL E
Sbjct: 356 LLDLYE 361



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 116/205 (56%), Gaps = 6/205 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N   + +E LP  +G L +LV L++  N++ ++P +IG LS L  L++  N++  L
Sbjct: 143 LNLSN---NQLEALPSDVGGLVNLVELNVHSNQLKSLPDSIGNLSKLTILNVSGNQLKTL 199

Query: 155 PDSIGDLLSLVYLDLRGNQIS-ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           P S+     ++ L+   NQ+   LPV   +L  L +L+L  NNL +LP+S G L  L+ L
Sbjct: 200 PMSLSKCSKMLELNAHFNQLEIWLPVFGWKLAMLRKLELQFNNLVTLPESFGYLSGLEHL 259

Query: 214 IVETNDLEELPHTIGQCSSLR--ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            +  N L  LP ++G  S L+  +L  ++N L  LP ++G +  L  L + +N I+ LP+
Sbjct: 260 DLSNNRLCCLPTSVGLLSHLKTLDLSRNFNNLCNLPHSLGNLTCLSTLDLSFNQIRVLPS 319

Query: 272 TMSSLSSLRELDVSFNELESVPESL 296
           ++  L +L+ L +  N L   P+ +
Sbjct: 320 SLGKLQNLKNLVLDQNPLTVPPKQV 344



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/114 (43%), Positives = 66/114 (57%), Gaps = 5/114 (4%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL--HANR 150
           R L LQ    +N+  LP+S G LS L  LDLS NR+  +P ++G LS LK LDL  + N 
Sbjct: 234 RKLELQ---FNNLVTLPESFGYLSGLEHLDLSNNRLCCLPTSVGLLSHLKTLDLSRNFNN 290

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +  LP S+G+L  L  LDL  NQI  LP +L +L  L+ L L  N L+  P  +
Sbjct: 291 LCNLPHSLGNLTCLSTLDLSFNQIRVLPSSLGKLQNLKNLVLDQNPLTVPPKQV 344


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/286 (36%), Positives = 161/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 112 EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 168

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 169 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 228

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 229 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 288

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L ++P+ +     L ++ +  N   L  LP+ I  L
Sbjct: 289 RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTLPKEIEQL 346

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L  LD+ NNQ+  LP     L  L+ L + EN L   P+ I ++
Sbjct: 347 QNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQL 392



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 101/323 (31%), Positives = 176/323 (54%), Gaps = 11/323 (3%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  +G+L +L  L+L+  ++  +P  IG L +L++LDL  N +  LP  +G L
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  N+++ LP+ + +L  L+ELDL SN L++LP  I  L +L++L +  N L 
Sbjct: 163 ENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT 222

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+ L +   +L  LP+ +G++  L+ L++  N +  LP  +  L +L  
Sbjct: 223 TLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEI 282

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N + ++P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP
Sbjct: 283 LVLRENRITALPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLP 340

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSW 399
                L  LRVL +  N L   P+   E+G    +Q +   +++    T P  ++Q K+ 
Sbjct: 341 KEIEQLQNLRVLDLDNNQLTTLPK---EIGQLQNLQELC--LDENQLTTFPKEIRQLKNL 395

Query: 400 VEMCFFSR--SNKRKRNGMDYVK 420
            E+  +    S+K K+   DY +
Sbjct: 396 QELHLYLNPLSSKEKKGFEDYFQ 418



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 159/279 (56%), Gaps = 7/279 (2%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  LDLS N +  +P  +G L +L++L+L++ ++
Sbjct: 70  LQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKL 129

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L +L  LDL  N ++ LP  + +L  L+ LDL  N L++LP  IG L +L+
Sbjct: 130 TTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQ 189

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  I Q  +L+EL +  N+L  LP+ +G++  L+ L++    +  LP 
Sbjct: 190 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPK 249

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ L++  N+L ++P+ +     L  + +  N   + ALP+ IG L+ L+ LD
Sbjct: 250 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN--RITALPKEIGQLQNLQRLD 307

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  NQ+  LP     L  L+ L + EN L   P+ I ++
Sbjct: 308 LHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQL 346



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L++LDL  N +  LP  +G L +L  L
Sbjct: 63  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L +  N L  LP  I
Sbjct: 123 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+L  LP+ + ++  L+ L +  N +  LP  +  L +L+ L++   
Sbjct: 183 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVT 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L  LP+ IG L+ LE L +  N+I  LP     L
Sbjct: 243 QLTTLPKEIGELQNLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 301 QNLQRLDLHQNQLTTLPKEIGQL 323



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 139/248 (56%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  LDL  N ++ LP  + 
Sbjct: 55  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVG 114

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L+L S  L++LP  IG L +L++L +  N L  LP  +GQ  +L+ L +  NR
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNR 174

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP  +G++  L+ L +  N +  LP  +  L +L+ELD+  N+L ++P+ +     L
Sbjct: 175 LATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNL 234

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             +N+      L  LP+ IG L+ L+ L++ +NQ+  LP     L  L +L ++EN +  
Sbjct: 235 KTLNLI--VTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 292

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 293 LPKEIGQL 300



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L L   +++ LP  + +L  L+ LDLG N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  +GQ  +L+ L ++  +L  LP+ +G++  L+ L + +N++  LP  
Sbjct: 99  LDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ LD+  N L ++P  +     L ++++ +N   L  LP+ I  L  L+ELD+
Sbjct: 159 VGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN--KLTTLPKEIRQLRNLQELDL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             NQ+  LP     L  L+ L +    L   P+ I E+
Sbjct: 217 HRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGEL 254



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 82/156 (52%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE    ++L   +     +R L +   +L  LP+ + ++  L++L + +N +  LP  + 
Sbjct: 32  VEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+SFN L ++P+ +     L ++N+  N   L  LP+ IG L  L+ELD+S 
Sbjct: 92  QLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSF 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N +  LP     L  L+ L + +N L   P  I ++
Sbjct: 150 NSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQL 185


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 155/266 (58%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+L+ N++  +P  IG L +L++L L  N++   P  IG L +L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++ LP  + +L  L EL L +N L +LP  IG L +L++L +  N L+ LP
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IGQ  +LREL + YN+LK L   +G++  L+VL +  N +K LP  +  L +L+ LD+
Sbjct: 178 KEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+ ++VPE +     L  +++G  +   + +P  IG L+ L+ L ++NNQ + +P+  
Sbjct: 238 NNNQFKTVPEEIGQLKNLQVLDLG--YNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L++L +  N L   P  I ++
Sbjct: 296 GQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 148/265 (55%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  IG+L +L +L LS+NR+  +P  IG L +L++L L+ N++  LP  IG L 
Sbjct: 102 NQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQLK 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ+  LP  + +L  L EL L  N L +L   IG L +L+ L +  N L+ 
Sbjct: 162 NLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKT 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L ++ N+ K +PE +G++  L+VL + YN  K +P  +  L +L+ L
Sbjct: 222 LPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+ ++VPE       L  +++  N   L  LP  I  L+ L EL +S NQ++ L  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSA 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L +++N L   P+ I
Sbjct: 340 EIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 135/237 (56%), Gaps = 5/237 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R+L L     + ++ LP  IG+L +L  L+L  N++  +P  IG L +L++L
Sbjct: 133 EIGQLKNLRELYLN---TNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLREL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  L   IG L +L  LDL  NQ+  LP  + +L  L+ LDL +N   ++P+ I
Sbjct: 190 HLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +P  IGQ  +L+ L ++ N+ K +PE  G++  L++LS+  N
Sbjct: 250 GQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNAN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +  LP  +  L +LREL +S+N+L+++   +     L K+++ +N   L  LP+ I
Sbjct: 310 QLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDN--QLTTLPKEI 364



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 123/218 (56%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L+L +N L++LP  IG L +L++
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQE 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  IGQ  +L+ L +  NRL  LP+ +G++  L  L +  N +K LP  
Sbjct: 97  LHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L++  N+L+++P+ +     L ++++   +  L+ L   IG L+ L+ LD+
Sbjct: 157 IGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLS--YNQLKTLSAEIGQLQNLQVLDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++NQ++ LP     L  L++L +  N  +  P  I ++
Sbjct: 215 NDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQL 252


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/306 (35%), Positives = 168/306 (54%), Gaps = 6/306 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL ++    +  LP  IG+L +L  LDLS N +  +P  +G L +L++L
Sbjct: 204 EVGQLENLQRLNLNSQ---KLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 260

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DLH NR+  LP  IG L +L  LDL  N+++ LP  + +L  L+ELDL  N L++LP  I
Sbjct: 261 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 320

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +    L  LP  IG+  +L+ L +  N+L  LP+ +G++  LE+L +R N
Sbjct: 321 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 380

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L +L+ LD+  N+L ++P+ +     L ++ +  N   L  LP+ I  L
Sbjct: 381 RITALPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTLPKEIEQL 438

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVVQYMADLV 383
           + L  LD+ NNQ+  LP     L  L+ L + EN L   P+ I ++   Q +  Y+  L 
Sbjct: 439 QNLRVLDLDNNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 498

Query: 384 EKRDAK 389
            K   +
Sbjct: 499 SKEKKR 504



 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 156/263 (59%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L++LDL  N +  LP  +G L +L  L
Sbjct: 63  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L + +  L  LP  I
Sbjct: 123 NLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL + +N L  LP+ VG++  L+ L++    +  LP  +  L +L+ELD+SFN
Sbjct: 183 GQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L ++++  N   L  LP  IG L+ L+ELD+++N++  LP   R L
Sbjct: 243 SLTTLPKEVGQLENLQRLDLHQN--RLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 301 RNLQELDLHRNQLTTLPKEIGQL 323



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 156/269 (57%), Gaps = 2/269 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  +G+L +L  L+L+  ++  +P  IG L +L++LDL  N +  LP  +G L
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 162

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L+L   +++ LP  + +L  L+ELDL  N+L++LP  +G L +L++L + +  L 
Sbjct: 163 ENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT 222

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+EL + +N L  LP+ VG++  L+ L +  N +  LP  +  L +L+E
Sbjct: 223 TLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQE 282

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD++ N+L ++P+ +     L ++++  N   L  LP+ IG L+ L+ L++   Q+  LP
Sbjct: 283 LDLNSNKLTTLPKEIRQLRNLQELDLHRN--QLTTLPKEIGQLQNLKTLNLIVTQLTTLP 340

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L  L+ L + +N L   P+ I E+
Sbjct: 341 KEIGELQNLKTLNLLDNQLTTLPKEIGEL 369



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 100/319 (31%), Positives = 173/319 (54%), Gaps = 14/319 (4%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  +G+L +L  L+L+  ++  +P  IG L +L++LDL  N +  LP  +G L
Sbjct: 195 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQL 254

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  N+++ LP+ + +L  L+ELDL SN L++LP  I  L +L++L +  N L 
Sbjct: 255 ENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT 314

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+ L +   +L  LP+ +G++  L+ L++  N +  LP  +  L +L  
Sbjct: 315 TLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEI 374

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N + ++P+ +     L ++++  N   L  LP+ IG L+ L+EL +  NQ+  LP
Sbjct: 375 LVLRENRITALPKEIGQLQNLQRLDLHQN--QLTTLPKEIGQLQNLQELCLDENQLTTLP 432

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSW 399
                L  LRVL +  N L   P+   E+G    +Q +   +++    T P  ++Q K+ 
Sbjct: 433 KEIEQLQNLRVLDLDNNQLTTLPK---EIGQLQNLQELC--LDENQLTTFPKEIRQLKNL 487

Query: 400 VEMCFF-----SRSNKRKR 413
            E+  +     S+  KR R
Sbjct: 488 QELHLYLNPLSSKEKKRIR 506



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 157/279 (56%), Gaps = 7/279 (2%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  LDLS N +  +P  +G L +L++L+L++ ++
Sbjct: 70  LQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKL 129

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L +L  LDL  N ++ LP  + +L  L+ L+L S  L++LP  IG L +L+
Sbjct: 130 TTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQ 189

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N L  LP  +GQ  +L+ L ++  +L  LP+ +G++  L+ L + +N++  LP 
Sbjct: 190 ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK 249

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ LD+  N L ++P  +     L ++++ +N   L  LP+ I  L  L+ELD
Sbjct: 250 EVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN--KLTTLPKEIRQLRNLQELD 307

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  NQ+  LP     L  L+ L +    L   P+ I E+
Sbjct: 308 LHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGEL 346



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 129/225 (57%), Gaps = 2/225 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L   ++  LP  I  L +L  LDL  NQ++ALP  + +L  L+ELDL  N+L++LP  +G
Sbjct: 55  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVG 114

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +L++L + +  L  LP  IGQ  +L+EL + +N L  LP+ VG++  L+ L++    
Sbjct: 115 QLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQK 174

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L+ELD+SFN L ++P+ +     L ++N+  N   L  LP+ IG L 
Sbjct: 175 LTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLR 232

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L+ELD+S N +  LP     L  L+ L + +N L   P  I ++
Sbjct: 233 NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQL 277



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 81/156 (51%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE    ++L   +     +R L +   +L  LP+ + ++  L++L + +N +  LP  + 
Sbjct: 32  VEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+SFN L ++P+ +     L ++N+  N   L  LP+ IG L  L+ELD+S 
Sbjct: 92  QLRNLQELDLSFNSLTTLPKEVGQLENLQRLNL--NSQKLTTLPKEIGQLRNLQELDLSF 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N +  LP     L  L+ L +    L   P+ I ++
Sbjct: 150 NSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQL 185


>gi|449457277|ref|XP_004146375.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
 gi|449530051|ref|XP_004172010.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 379

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/277 (40%), Positives = 155/277 (55%), Gaps = 10/277 (3%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSLPD 202
           LDL    +  LP+   +L S+ +LDL  N +  +P +L+ RL+ L   D+ SN L +LP+
Sbjct: 66  LDLSGLSLHSLPNPTLNLASISHLDLSNNNLQVIPESLTARLLNLVSFDVHSNQLKTLPN 125

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSV 261
           SIG L  LK L V  N +  LP TI  C SL EL  ++N+L  LP+ +G ++  L+ LSV
Sbjct: 126 SIGCLSKLKILNVSGNLIVSLPSTIENCRSLEELNANFNQLTRLPDTIGFELTNLKKLSV 185

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +  LP ++S L++LR LD   N L S+P+ L     L  +NI  NF  L+ALP SI
Sbjct: 186 NSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDLENLINLQVLNISQNFQFLQALPYSI 245

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L  L ELD+S N+I  LPDS   L  L+ L V+ NPL  PP  ++E G   V  Y+ D
Sbjct: 246 GLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPPPEVIEQGLDTVRMYLTD 305

Query: 382 LVEKRDAKTQPVKQKKSWVEM-----CFFSRSNKRKR 413
              K +   +   +K+SWV        F SRSNK  R
Sbjct: 306 ---KMNGVHKDSHKKRSWVGKLVKYGTFNSRSNKLSR 339



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 109/171 (63%), Gaps = 3/171 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP+SIG LS L  L++S N IV++P+TI    SL++L+ + N++  LPD+IG +L
Sbjct: 118 NQLKTLPNSIGCLSKLKILNVSGNLIVSLPSTIENCRSLEELNANFNQLTRLPDTIGFEL 177

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N+++ LP +LS L  L  LD   N L SLPD + +LI+L+ L +  N   
Sbjct: 178 TNLKKLSVNSNKLAFLPHSLSHLTALRVLDSHLNCLRSLPDDLENLINLQVLNISQNFQF 237

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           L+ LP++IG   SL EL V YN++ +LP+++G +  L+ L+V  N +   P
Sbjct: 238 LQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPP 288



 Score = 47.0 bits (110), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 37/54 (68%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           ++ LP SIG L SLV LD+S N+I+++P +IG L +LKKL++  N +   P  +
Sbjct: 238 LQALPYSIGLLISLVELDVSYNKIISLPDSIGCLKNLKKLNVEGNPLTSPPPEV 291


>gi|365920060|ref|ZP_09444414.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364578571|gb|EHM55771.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 412

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/274 (36%), Positives = 171/274 (62%), Gaps = 23/274 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +IG+LS+L  L L +N++V +P  IG L +L++LDL  N++  LP +IG L +L  L
Sbjct: 108 LPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVL 167

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR N+++ LP  + +L  L++L LGSN L++LP  IG L +L++LI+  + L  LP  I
Sbjct: 168 NLRENKLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEI 227

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV------------------RY---NNI 266
           GQ  +L++L +  ++L ALP ++G++  L+ +++                  +Y    N+
Sbjct: 228 GQLGNLQKLYLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNL 287

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LPT +  LS+L++LD+S N++ ++P+++   + L K+N+  N   L ALP  IG L+ 
Sbjct: 288 TTLPTKIGQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGN--KLTALPDVIGQLDN 345

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           L+ELD+S N++  LP+S   L  L+++ +++N L
Sbjct: 346 LQELDLSGNKLATLPESIDQLHNLQIINLRDNML 379



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 156/282 (55%), Gaps = 19/282 (6%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+LS+L  L L    +  +PA IG L++L+KLDL  N++  LP +IG L +L  L
Sbjct: 62  LPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSNLQKL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LPVA+ +L  L+ELDL  N L+ LP +IG L +L+ L +  N L  LP  I
Sbjct: 122 SLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTLPAGI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +  NRL  LP  +G++H L+ L +  + +  LP  +  L +L++L +  +
Sbjct: 182 GQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKLYLLGH 241

Query: 288 ELESVPESLCFATTLVKMNIGNN-------------------FADLRALPRSIGNLEMLE 328
           +L ++P S+   + L  + I ++                     +L  LP  IG L  L+
Sbjct: 242 QLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLRNLTTLPTKIGQLSNLQ 301

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +LD+S+NQI  LPD+   LS L+ L +  N L   P  I ++
Sbjct: 302 KLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQL 343



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/216 (37%), Positives = 130/216 (60%), Gaps = 4/216 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  NR+  +PA IG L +L++L L  +++  LP  IG L +L  L
Sbjct: 177 LPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQKL 236

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L G+Q++ALP ++ +L  L+ + + S+ L  L D +  L  LK L +   +L  LP  I
Sbjct: 237 YLLGHQLAALPNSIGQLSNLQSITIDSHLLLELIDMVPHLPKLKYLSLR--NLTTLPTKI 294

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S+L++L +  N++ ALP+A+G++  L+ L++  N +  LP  +  L +L+ELD+S N
Sbjct: 295 GQLSNLQKLDLSDNQITALPDAIGQLSNLQKLNLSGNKLTALPDVIGQLDNLQELDLSGN 354

Query: 288 ELESVPESLCFATTLVKMNIGNNF--ADLRALPRSI 321
           +L ++PES+     L  +N+ +N    +L  LP SI
Sbjct: 355 KLATLPESIDQLHNLQIINLRDNMLGYNLDVLPNSI 390



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           Q + LP  + +L  L+EL L   +L+ LP  IG L +L+KL +  N L  LP TIGQ S+
Sbjct: 58  QFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQLNNLQKLDLTGNQLNTLPATIGQLSN 117

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L++L +  N+L  LP A+G++  L+ L + +N +  LP T+  L +L+ L++  N+L ++
Sbjct: 118 LQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLTVLPATIGQLGNLQVLNLRENKLTTL 177

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           P  +     L K+++G+N   L  LP  IG L  L+EL +  +Q+  LP     L  L+ 
Sbjct: 178 PAGIGQLGNLQKLSLGSN--RLTTLPAEIGQLHNLQELILCEDQLTTLPVEIGQLGNLQK 235

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  + L   P +I ++
Sbjct: 236 LYLLGHQLAALPNSIGQL 253



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 6/201 (2%)

Query: 175 SALPVALSRLVRLEEL----DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           +ALP   + L+ L++L     L     + LP  IG L +L++L++   DL ELP  IGQ 
Sbjct: 33  AALPRDKAELLVLQKLVLFRKLFRKQFALLPAEIGQLSNLQELVLFWGDLTELPAEIGQL 92

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           ++L++L +  N+L  LP  +G++  L+ LS+  N +  LP  +  L +L+ELD+  N+L 
Sbjct: 93  NNLQKLDLTGNQLNTLPATIGQLSNLQKLSLGDNQLVILPVAIGQLGNLQELDLWHNQLT 152

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P ++     L  +N+  N   L  LP  IG L  L++L + +N++  LP     L  L
Sbjct: 153 VLPATIGQLGNLQVLNLREN--KLTTLPAGIGQLGNLQKLSLGSNRLTTLPAEIGQLHNL 210

Query: 351 RVLRVQENPLEVPPRNIVEMG 371
           + L + E+ L   P  I ++G
Sbjct: 211 QELILCEDQLTTLPVEIGQLG 231


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/269 (38%), Positives = 154/269 (57%), Gaps = 3/269 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + N E LP  IG+L +L  L LS N++  +P  IG L  +++L L  N++  LP  IG L
Sbjct: 49  LHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKL 108

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDL  N ++ LP  + +L  L EL L +N L +LP  IG L +L++L ++ N L+
Sbjct: 109 KKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLK 168

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +LREL +D N+LK LP+ +GK+  L  L++  N +  LP  + +L +L E
Sbjct: 169 TLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGE 228

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  NEL ++P+ +     L  + +G   A L  LP  IG L+ L EL++S NQI  LP
Sbjct: 229 LLLINNELTTLPKEIGKLKNLQVLYLG---ALLTTLPNDIGYLKSLRELNLSGNQITTLP 285

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L  L+VL + EN L   P+ I ++
Sbjct: 286 KDIGQLQNLQVLYLSENQLATLPKEIGQL 314



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 164/297 (55%), Gaps = 27/297 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++   K  R+L+L N L+     LP  IG+L +L  L L+ N++  +P  IG L +L++L
Sbjct: 104 DIGKLKKLRELDLTNNLLT---TLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLREL 160

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L GNQ+  LP  + +L  L EL+L +N L++LP  I
Sbjct: 161 YLDNNQLKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDI 220

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCS----------------------SLRELRVDYNR 242
           G+L +L +L++  N+L  LP  IG+                        SLREL +  N+
Sbjct: 221 GNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQ 280

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           +  LP+ +G++  L+VL +  N +  LP  +  L +LRELD+S N++ ++P+ +    +L
Sbjct: 281 ITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSL 340

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            ++N+  N   +  LP+ IG L+ L EL++  NQI  +P     L  L+VL + + P
Sbjct: 341 RELNLSGN--QITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIP 395


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/284 (37%), Positives = 163/284 (57%), Gaps = 5/284 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R+L L +  +  +   P  I +L++L +L L  N++ ++PA IG L+SL  L L+ NR+ 
Sbjct: 111 RELYLHDNQLTGV---PAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLT 167

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L SL  L L GNQ++++P  + +L  LE+L+L  N L+S+P  IG L SLK 
Sbjct: 168 SLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKA 227

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ +SL  LR+  NRL +LP  +G++ +LE L +  N +  +P  
Sbjct: 228 LWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAE 287

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SL+EL +  N L SVP  +   T+L  +++ NN   L +LP  IG L  L+ L +
Sbjct: 288 IGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALSLYNN--RLTSLPEEIGQLTSLDRLYL 345

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
             NQ+  +P+    LS L  L +  N L   P  I ++ + +V+
Sbjct: 346 GRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPAEIAQLTSLSVL 389



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/267 (38%), Positives = 160/267 (59%), Gaps = 8/267 (2%)

Query: 81  ASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
           A + +++S  G R  N  N+L      LP  IG+L+SL +L L  N++ +VPA IG L+S
Sbjct: 148 AEIGQLTSLTGLRLYN--NRLTS----LPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTS 201

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L+KL+L+ N++  +P  IG L SL  L L GNQ+++LP  + +L  L  L L +N L+SL
Sbjct: 202 LEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSL 261

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  IG L SL+ L +  N L  +P  IGQ +SL+EL +  NRL ++P  +G++ +L  LS
Sbjct: 262 PAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLGALS 321

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N +  LP  +  L+SL  L +  N+L SVPE +   ++L+ + +G+N   L ++P  
Sbjct: 322 LYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSN--QLTSIPAE 379

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRML 347
           I  L  L  LD+S NQ+  +P + R L
Sbjct: 380 IAQLTSLSVLDLSGNQLTSVPAAIREL 406



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 151/272 (55%), Gaps = 3/272 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           KL +N +  LP  IG+L+SL  L L  N++   PA IG L++L +L LH N++  +P  I
Sbjct: 45  KLYNNQLTSLPAEIGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEI 104

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L SL  L L  NQ++ +P  + +L  LE L L  N L+SLP  IG L SL  L +  N
Sbjct: 105 GLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNN 164

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP  IGQ +SL  L +  N+L ++P  +G++ +LE L +  N +  +P  +  L+S
Sbjct: 165 RLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTS 224

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+ L +  N+L S+P  +   T+L  + + NN   L +LP  IG L  LE L + +NQ+ 
Sbjct: 225 LKALWLFGNQLTSLPAEIGQLTSLTGLRLYNN--RLTSLPAEIGQLTSLEALWLHDNQLT 282

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P     L+ L+ L +  N L   P  I ++
Sbjct: 283 SVPAEIGQLTSLKELWLHGNRLTSVPAEIGQL 314



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 150/286 (52%), Gaps = 25/286 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL--V 165
           LP  IG+L+SL  L+L  N + +VPA I  L++L++L L+ N++  LP  IG L SL  +
Sbjct: 8   LPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLREL 67

Query: 166 YLD---------------------LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           YL                      L GNQ++++P  +  L  L EL L  N L+ +P  I
Sbjct: 68  YLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEI 127

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IGQ +SL  LR+  NRL +LP  +G++ +LE L +  N
Sbjct: 128 VQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGN 187

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L+SL +L++  N+L SVP  +   T+L  + +  N   L +LP  IG L
Sbjct: 188 QLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGN--QLTSLPAEIGQL 245

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L + NN++  LP     L+ L  L + +N L   P  I ++
Sbjct: 246 TSLTGLRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQL 291



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 135/245 (55%), Gaps = 2/245 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N++ ++PA IG L+SL KL+L  N +  +P  I  L +L  L L  NQ+++LP  + +L 
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLT 62

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L EL L +N L+  P  IG L +L +L++  N L  +P  IG  +SLREL +  N+L  
Sbjct: 63  SLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTG 122

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +P  + ++ TLE L +  N +  LP  +  L+SL  L +  N L S+P  +   T+L  +
Sbjct: 123 VPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEAL 182

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            +  N   L ++P  IG L  LE+L++ +NQ+  +P     L+ L+ L +  N L   P 
Sbjct: 183 YLHGN--QLTSVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPA 240

Query: 366 NIVEM 370
            I ++
Sbjct: 241 EIGQL 245



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 2/200 (1%)

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           GNQ+++LP  + +L  L +L+LG N+L+S+P  I  L +L++L +  N L  LP  IGQ 
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQL 61

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           +SLREL +  N+L   P  +G++  L  L +  N +  +P  +  L+SLREL +  N+L 
Sbjct: 62  TSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLT 121

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            VP  +   TTL  + +  N   L +LP  IG L  L  L + NN++  LP     L+ L
Sbjct: 122 GVPAEIVQLTTLEALWLHGN--QLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSL 179

Query: 351 RVLRVQENPLEVPPRNIVEM 370
             L +  N L   P  I ++
Sbjct: 180 EALYLHGNQLTSVPAEIGQL 199



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 2/86 (2%)

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L S+P  +   T+L K+N+G N   L ++P  I  L  L+EL + NNQ+  LP     
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNH--LTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQ 60

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGA 372
           L+ LR L +  N L + P  I ++ A
Sbjct: 61  LTSLRELYLCNNKLTIAPAEIGQLTA 86


>gi|356556262|ref|XP_003546445.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Glycine max]
          Length = 363

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/279 (39%), Positives = 156/279 (55%), Gaps = 8/279 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP    DL ++  LDL  N +  +P +L+ RL+ +E LD+ SN L+S
Sbjct: 44  LQVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLNS 103

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N +E LP TI  C +L EL  ++N+L  LP+ +G ++  L+ 
Sbjct: 104 LPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELINLKK 163

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP++ S L++L+ LD   N L ++PE L     L  +N+  NF  L  +P
Sbjct: 164 LSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLETIP 223

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD+S N I+ LP+S   L  L+ L V+ NPL  PP  +VE G   V++Y
Sbjct: 224 YSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEY 283

Query: 379 MADLVEKRDAKTQPVKQKKSWV--EMCFFSRSNKRKRNG 415
           M   +   D      K KK W   ++      NK+ RNG
Sbjct: 284 MHHKINSSDQN----KTKKRWWMGKIVKCGTFNKQFRNG 318



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 47/76 (61%), Gaps = 2/76 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP+ +  L +L +L++S+N   +  +P +IG L SL +LD+  N I  LP+SIG L +L 
Sbjct: 197 LPEDLENLINLETLNVSQNFQYLETIPYSIGLLWSLVELDVSYNNIKTLPESIGCLKNLQ 256

Query: 166 YLDLRGNQISALPVAL 181
            L + GN ++  P+ +
Sbjct: 257 KLSVEGNPLTCPPMEV 272


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 169/309 (54%), Gaps = 30/309 (9%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL+SL  E+      + LNL +  + +   LP  IG+L+ L SLDLS N++ ++PA IG 
Sbjct: 87  KLSSLPAEIGQLAKLQSLNLSHNRLSS---LPAEIGQLTKLQSLDLSFNQLSSLPAEIGQ 143

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L+ L+ L+L  NR+  LP  IG L  L  LDL  NQ+S+LP  + +L +L+ LDL +N L
Sbjct: 144 LAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQL 203

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           SSLP  IG L  L+ L +  N L  LP  IGQ ++L+ L + +N+L +LP  + ++  L+
Sbjct: 204 SSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQ 263

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L + +N +  LP  +  L++L+ LD+S N+L S                         L
Sbjct: 264 FLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSS-------------------------L 298

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSF-RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           P  IG L  L+ L++  NQ+  LP     + S LR L++  N LE PP  I+  G +A++
Sbjct: 299 PAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRELKLDSNLLESPPPEILSKGTKAIL 358

Query: 377 QYMADLVEK 385
            +    +E+
Sbjct: 359 NFYKQQLEQ 367



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/311 (31%), Positives = 162/311 (52%), Gaps = 22/311 (7%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE--------------NRI 128
           +IE ++ +G   L+L     + +  LP  IGKL+ L  L L +              N++
Sbjct: 9   IIERAATQGCAGLDLSG---NELTVLPPEIGKLTQLKRLILGKYRYDDKGRIVGTIGNKL 65

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
             +P  IG L+ L++  +  N++  LP  IG L  L  L+L  N++S+LP  + +L +L+
Sbjct: 66  SKLPREIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQ 125

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
            LDL  N LSSLP  IG L  L+ L +  N L  LP  IGQ + L+ L +  N+L +LP 
Sbjct: 126 SLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPA 185

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +G++  L+ L +  N +  LP  +  L+ L+ LD+  N+L S+P  +   T L  +++ 
Sbjct: 186 EIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLS 245

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +N   L +LP  I  L  L+ L +S+N++  LP     L+ L+ L +  N L   P    
Sbjct: 246 HN--KLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKLSSLP---A 300

Query: 369 EMGAQAVVQYM 379
           E+G    +Q++
Sbjct: 301 EIGQLTKLQFL 311


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 171/272 (62%), Gaps = 5/272 (1%)

Query: 95  LNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +NL   ++ N  I  +PD++ KL +L  LDLS N+I  +P  +  L++L +L L++N+I 
Sbjct: 287 INLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQIT 346

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           E+P+ I  L +L  LDL  NQI+ +P AL++L  L +L L SN +S +P+++  LI+L +
Sbjct: 347 EIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQ 406

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           +I+  N + E+P  + + ++L +L + YN++  +PEA+ K+  L  + +  N I ++P  
Sbjct: 407 IILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEA 466

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           ++ L++LR+L +S+N +  +PE+L   T L ++N+ +N   +  +P+++  L  L +LD+
Sbjct: 467 LAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDN--QIIKIPKALAKLSNLTQLDL 524

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           + N+I  +P++   L+ L  L ++ N + E+P
Sbjct: 525 NRNKITEIPEALAKLTNLTQLYLRNNRITEIP 556



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 168/266 (63%), Gaps = 8/266 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+++ KL++L  L+LS+N+I+ +P  +  LS+L +LDL+ N+I E+P+++  L 
Sbjct: 481 NRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPEALAKLT 540

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSN-NLSSLPDSIGSLISLKKLIVETNDLE 221
           +L  L LR N+I+ +P AL++L  L +LDLG+N N+S +P++I  L +L +L + ++ + 
Sbjct: 541 NLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQIT 600

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E+P  I + ++L +L +  N++  +PEA+ K+  L  L +  N I ++P  ++ L++L +
Sbjct: 601 EIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQ 660

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L+++ N++  +PE++   T L ++ +   +  +  +P +I  L  L +L +++NQI  +P
Sbjct: 661 LNLTSNQITKIPEAIAKLTNLTQLILS--YNQITEIPEAIAKLTNLTQLILTSNQITEIP 718

Query: 342 DSFRMLSRLRVL-----RVQENPLEV 362
           D+   L+ L  L     R+ E PLE+
Sbjct: 719 DAITKLTNLTQLDLSYNRISEIPLEI 744



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 165/263 (62%), Gaps = 4/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+ I KL++L  LDLS N+I  +P  +  L++L +L L++NRI E+P+++  L+
Sbjct: 343 NQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLI 402

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  + L  N+IS +P AL++L  L +LDL  N ++ +P+++  LI+L ++I+ +N + E
Sbjct: 403 NLTQIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITE 462

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  + + ++LR+L + YNR+  +PEA+ K+  L  L++  N I ++P  ++ LS+L +L
Sbjct: 463 IPEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQL 522

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLP 341
           D++ N++  +PE+L   T L ++ + NN   +  +P ++  L  L +LD+  N  I  +P
Sbjct: 523 DLNRNKITEIPEALAKLTNLTQLYLRNN--RITEIPEALAKLTNLTQLDLGTNYNISEIP 580

Query: 342 DSFRMLSRLRVLRVQENPL-EVP 363
           ++   L+ L  L +  + + E+P
Sbjct: 581 EAITKLTNLTQLNLTSSQITEIP 603



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 161/262 (61%), Gaps = 3/262 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P+ I KLS+L  L +S N+I  +P  I  LS+L++L + +N+I E+P++I +L 
Sbjct: 136 NHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLS 195

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  NQI+ +P A+++L+ L EL + SN ++ +P+ I  L +L+KL +  N + E
Sbjct: 196 NLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITE 255

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I + ++L +L + YN++  + EA+ K+  L  + +  N I ++P  ++ L +L +L
Sbjct: 256 IPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQL 315

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S+N++  +PE+L   T L ++ + +N   +  +P  I  L  L +LD+S NQI  +P+
Sbjct: 316 DLSYNQITKIPEALAKLTNLTQLILYSN--QITEIPEVIAKLTNLTQLDLSYNQITKIPE 373

Query: 343 SFRMLSRLRVLRVQENPL-EVP 363
           +   L+ L  L +  N + E+P
Sbjct: 374 ALAKLTNLTQLILYSNRISEIP 395



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 173/294 (58%), Gaps = 6/294 (2%)

Query: 79  KLASLIEVSSK-KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           K+  + EV +K    R L L+N   + I  +P+ I KL++L  LDLS N+I  +   +  
Sbjct: 229 KITEIPEVIAKLTNLRKLYLRN---NQITEIPEVIAKLTNLTQLDLSYNQITKISEALAK 285

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L ++ LH N+I E+PD++  L++L  LDL  NQI+ +P AL++L  L +L L SN +
Sbjct: 286 LINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQI 345

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           + +P+ I  L +L +L +  N + ++P  + + ++L +L +  NR+  +PEA+ K+  L 
Sbjct: 346 TEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLT 405

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            + + YN I ++P  ++ L++L +LD+S+N++  +PE+L     L ++ + +N   +  +
Sbjct: 406 QIILSYNRISEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSN--KITEI 463

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           P ++  L  L +L +S N+I  +P++   L+ L  L + +N +   P+ + ++ 
Sbjct: 464 PEALAKLTNLRQLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLS 517



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 154/260 (59%), Gaps = 3/260 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +PD + ++  L  L L    +  +P  I  LS+L +L  ++N I ++P+ I  L +L
Sbjct: 92  LESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHISKIPELIAKLSNL 151

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N+I+ +P A+++L  L EL + SN ++ +P++I +L +L++L V +N + E+P
Sbjct: 152 RELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLRELHVSSNQITEIP 211

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I +  +LREL+V  N++  +PE + K+  L  L +R N I ++P  ++ L++L +LD+
Sbjct: 212 EAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLTNLTQLDL 271

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S+N++  + E+L     L ++ + NN   +  +P ++  L  L +LD+S NQI  +P++ 
Sbjct: 272 SYNQITKISEALAKLINLTQIILHNN--KITEIPDALAKLINLTQLDLSYNQITKIPEAL 329

Query: 345 RMLSRLRVLRVQENPL-EVP 363
             L+ L  L +  N + E+P
Sbjct: 330 AKLTNLTQLILYSNQITEIP 349



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/262 (30%), Positives = 153/262 (58%), Gaps = 3/262 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I KL +L  L +S N+I  +P  I  L++L+KL L  N+I E+P+ I  L 
Sbjct: 205 NQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLRKLYLRNNQITEIPEVIAKLT 264

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  NQI+ +  AL++L+ L ++ L +N ++ +PD++  LI+L +L +  N + +
Sbjct: 265 NLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPDALAKLINLTQLDLSYNQITK 324

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  + + ++L +L +  N++  +PE + K+  L  L + YN I ++P  ++ L++L +L
Sbjct: 325 IPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLTQLDLSYNQITKIPEALAKLTNLTQL 384

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N +  +PE+L     L ++ +   +  +  +P ++  L  L +LD+S NQI  +P+
Sbjct: 385 ILYSNRISEIPEALAKLINLTQIILS--YNRISEIPEALAKLTNLTQLDLSYNQITKIPE 442

Query: 343 SFRMLSRLRVLRVQENPL-EVP 363
           +   L  L  + +  N + E+P
Sbjct: 443 ALAKLINLTQIILHSNKITEIP 464



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 161/304 (52%), Gaps = 24/304 (7%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSL----------------- 121
           +L  LI+ +  +G R+L+L  + +     LP  IGKL  L SL                 
Sbjct: 5   ELLELIDRAVAEGWRELDLSGQELTE---LPGEIGKLQQLESLILGKKLEGYERVGSRIL 61

Query: 122 -DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
             +S N +  +P  + GL +L+KLD+  N +  +PD +  +L L  L L   +++ +P A
Sbjct: 62  EKVSGNNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEA 121

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           ++ L  L +L   SN++S +P+ I  L +L++L V +N + E+P  I + S+LREL V  
Sbjct: 122 IANLSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSS 181

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++  +PEA+  +  L  L V  N I ++P  ++ L +LREL VS N++  +PE +   T
Sbjct: 182 NQITEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLT 241

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+ + NN   +  +P  I  L  L +LD+S NQI  + ++   L  L  + +  N +
Sbjct: 242 NLRKLYLRNN--QITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKI 299

Query: 361 -EVP 363
            E+P
Sbjct: 300 TEIP 303



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 146/236 (61%), Gaps = 13/236 (5%)

Query: 76  SLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
           +L KL++L ++       DLN +NK+ +    +P+++ KL++L  L L  NRI  +P  +
Sbjct: 512 ALAKLSNLTQL-------DLN-RNKITE----IPEALAKLTNLTQLYLRNNRITEIPEAL 559

Query: 136 GGLSSLKKLDLHAN-RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
             L++L +LDL  N  I E+P++I  L +L  L+L  +QI+ +P  +++L  L +L+L S
Sbjct: 560 AKLTNLTQLDLGTNYNISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTS 619

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N ++ +P++I  L +L +LI+ +N + E+P  I + ++L +L +  N++  +PEA+ K+ 
Sbjct: 620 NQIAEIPEAIAKLTNLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLT 679

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            L  L + YN I ++P  ++ L++L +L ++ N++  +P+++   T L ++++  N
Sbjct: 680 NLTQLILSYNQITEIPEAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYN 735


>gi|115460388|ref|NP_001053794.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|38346910|emb|CAE03882.2| OSJNBb0015N08.10 [Oryza sativa Japonica Group]
 gi|113565365|dbj|BAF15708.1| Os04g0605300 [Oryza sativa Japonica Group]
 gi|125549626|gb|EAY95448.1| hypothetical protein OsI_17289 [Oryza sativa Indica Group]
 gi|125591552|gb|EAZ31902.1| hypothetical protein OsJ_16067 [Oryza sativa Japonica Group]
 gi|215692656|dbj|BAG88076.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215694832|dbj|BAG90023.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737669|dbj|BAG96799.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 352

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 149/261 (57%), Gaps = 6/261 (2%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
            KLD+    +  LP     L  +  LDL  N + ++P ++ +RL+ +  LD+ SN L SL
Sbjct: 33  HKLDMSGMSMDALPHLTMSLGQVTILDLSNNNLESIPESIIARLLNVVVLDVRSNQLKSL 92

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  LK L V  N LE LP+TI +C +L EL  ++N L  LP+ +G ++H+L  L
Sbjct: 93  PNSIGCLSKLKVLNVSGNLLESLPNTIEECRALEELHANFNELTKLPDTLGFELHSLRKL 152

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N + QLP++ S +++LR LD   N L ++P+ L     L  +N+  NF  LR LP 
Sbjct: 153 SVNSNKLAQLPSSTSHMTALRALDARLNCLRALPDGLENLANLEALNVSQNFQFLRELPY 212

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G L  L ELD+S N I  LPDS   L++L       NPL  PP ++VE G  A+  Y+
Sbjct: 213 AVGLLASLRELDVSYNSIAALPDSMGCLTKLARFSAVGNPLVSPPMDVVEQGLDAMRAYL 272

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
              +   D K    ++KK+W+
Sbjct: 273 TARMNGGDGK----RKKKAWL 289



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 46/77 (59%), Gaps = 2/77 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENR--IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  LPD +  L++L +L++S+N   +  +P  +G L+SL++LD+  N I  LPDS+G L 
Sbjct: 182 LRALPDGLENLANLEALNVSQNFQFLRELPYAVGLLASLRELDVSYNSIAALPDSMGCLT 241

Query: 163 SLVYLDLRGNQISALPV 179
            L      GN + + P+
Sbjct: 242 KLARFSAVGNPLVSPPM 258


>gi|225456898|ref|XP_002280677.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Vitis vinifera]
          Length = 517

 Score =  165 bits (418), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 114/275 (41%), Positives = 164/275 (59%), Gaps = 9/275 (3%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            L+++DL   R+  LP++ G + SLV L+L  NQ+  +P +++ L  LEEL+L SN L  
Sbjct: 214 GLERVDLSGRRLRFLPEAFGKIRSLVALNLSCNQLEFIPDSIATLENLEELNLSSNLLEL 273

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LPDSIG L++LK L    N L  LP +I  C SL EL V +N L  LP  +G ++  L+ 
Sbjct: 274 LPDSIGLLVNLKILDASGNKLLALPDSICHCRSLVELDVSFNNLAYLPTNIGYELVNLKR 333

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N I+ LPT++  + SL  LD  FNEL  +P ++   T L  +N+ +NF+DL  LP
Sbjct: 334 LSINLNKIRSLPTSIGEMRSLCHLDAHFNELRGLPSAIGRLTNLETLNLSSNFSDLTELP 393

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            +IG+L  L ELD+SNNQI+ LPD+F  L  L  L + +NPL +PP  +V  G +AV  +
Sbjct: 394 ETIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLVIPPMEVVNEGVEAVKVF 453

Query: 379 MAD-----LVEKRDAKTQPVKQKKSWVEMCFFSRS 408
           MA      LVE+       VK++    E  + +RS
Sbjct: 454 MAKRWLDILVEEEQKSLLEVKEQ---TETGWLTRS 485



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
            + +  LP +IG+L++L +L+LS N   +  +P TIG L++L++LDL  N+I  LPD+ G
Sbjct: 361 FNELRGLPSAIGRLTNLETLNLSSNFSDLTELPETIGDLTNLRELDLSNNQIQALPDTFG 420

Query: 160 DLLSLVYLDLRGN 172
            L +L  L+L  N
Sbjct: 421 RLDNLNKLNLDQN 433



 Score = 45.8 bits (107), Expect = 0.035,   Method: Compositional matrix adjust.
 Identities = 27/58 (46%), Positives = 38/58 (65%), Gaps = 1/58 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           LNL +   D  E LP++IG L++L  LDLS N+I A+P T G L +L KL+L  N ++
Sbjct: 380 LNLSSNFSDLTE-LPETIGDLTNLRELDLSNNQIQALPDTFGRLDNLNKLNLDQNPLV 436


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 155/266 (58%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+L+ N++  +P  IG L +L++L L  N++   P  IG L +L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++ LP  + +L  L EL L +N  ++ P  IG L +L++L +  N L+ LP
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +LREL + YN+LK L   +G++  L+VL +  N +K LP  +  L +L+ LD+
Sbjct: 178 NEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+ ++VPE +     L  +++G  +   + +P  IG L+ L+ L ++NNQ + +P+  
Sbjct: 238 NNNQFKTVPEEIGQLKNLQVLDLG--YNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L++L +  N L   P  I ++
Sbjct: 296 GQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 147/265 (55%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  IG+L +L +L LS+NR+  +P  IG L +L++L L+ N+    P  IG L 
Sbjct: 102 NQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLK 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ+  LP  + +L  L EL L  N L +L   IG L +L+ L +  N L+ 
Sbjct: 162 NLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKT 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L ++ N+ K +PE +G++  L+VL + YN  K +P  +  L +L+ L
Sbjct: 222 LPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+ ++VPE       L  +++  N   L  LP  I  L+ L EL +S NQ++ L  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSA 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L +++N L+  P+ I
Sbjct: 340 EIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 140/244 (57%), Gaps = 2/244 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL+E ++  +P  IG L +L+ L+L+ N++  LP  IG L +L  L L GNQ++  P  
Sbjct: 51  LDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L  N L++LP  IG L +L++L + TN     P  IGQ  +L++L +  
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+LK LP  +G++  L  L + YN +K L   +  L +L+ LD++ N+L+++P+ +    
Sbjct: 171 NQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLK 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ NN    + +P  IG L+ L+ LD+  NQ + +P+    L  L++L +  N  
Sbjct: 231 NLQMLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQF 288

Query: 361 EVPP 364
           +  P
Sbjct: 289 KTVP 292



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 134/227 (59%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL+  ++  LP  IG L +L  L+L  NQ++ LP  + +L  L+EL L  N L++ P  
Sbjct: 51  LDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKE 110

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L+ L++  N L  LP  IGQ  +LREL ++ N+  A P+ +G++  L+ L++  
Sbjct: 111 IGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYA 170

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K LP  +  L +LREL +S+N+L+++   +     L  +++ +N   L+ LP+ IG 
Sbjct: 171 NQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDN--QLKTLPKEIGQ 228

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ LD++NNQ + +P+    L  L+VL +  N  +  P  I ++
Sbjct: 229 LKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQL 275



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 3/212 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + ++ LP+ IG+L +L  L LS N++  + A IG L +L+ L
Sbjct: 156 EIGQLKNLQQLNL---YANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L +L  LDL  NQ   +P  + +L  L+ LDLG N   ++P+ I
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +P   GQ  +L+ L ++ N+L  LP  + ++  L  L + YN
Sbjct: 273 GQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +K L   +  L +L++L +  N+L+++P+ +
Sbjct: 333 QLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  165 bits (418), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 155/266 (58%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+L+ N++  +P  IG L +L++L L  N++   P  IG L +L
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++ LP  + +L  L EL L +N  ++ P  IG L +L++L +  N L+ LP
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +LREL + YN+LK L   +G++  L+VL +  N +K LP  +  L +L+ LD+
Sbjct: 178 NEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+ ++VPE +     L  +++G  +   + +P  IG L+ L+ L ++NNQ + +P+  
Sbjct: 238 NNNQFKTVPEEIGQLKNLQVLDLG--YNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEET 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L++L +  N L   P  I ++
Sbjct: 296 GQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 147/265 (55%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  IG+L +L +L LS+NR+  +P  IG L +L++L L+ N+    P  IG L 
Sbjct: 102 NQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLK 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ+  LP  + +L  L EL L  N L +L   IG L +L+ L +  N L+ 
Sbjct: 162 NLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKT 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L ++ N+ K +PE +G++  L+VL + YN  K +P  +  L +L+ L
Sbjct: 222 LPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQML 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+ ++VPE       L  +++  N   L  LP  I  L+ L EL +S NQ++ L  
Sbjct: 282 FLNNNQFKTVPEETGQLKNLQMLSLNAN--QLTTLPNEIRQLKNLRELHLSYNQLKTLSA 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L +++N L+  P+ I
Sbjct: 340 EIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 121/212 (57%), Gaps = 3/212 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + ++ LP+ IG+L +L  L LS N++  + A IG L +L+ L
Sbjct: 156 EIGQLKNLQQLNL---YANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L +L  LDL  NQ   +P  + +L  L+ LDLG N   ++P+ I
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +P   GQ  +L+ L ++ N+L  LP  + ++  L  L + YN
Sbjct: 273 GQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +K L   +  L +L++L +  N+L+++P+ +
Sbjct: 333 QLKTLSAEIGQLKNLKKLSLRDNQLKTLPKEI 364



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 126/241 (52%), Gaps = 25/241 (10%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L+L +N L++LP  IG L +L++
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQE 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL-----------------------PEA 249
           L +  N L   P  IGQ  +L+ L +  NRL  L                       P+ 
Sbjct: 97  LHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKE 156

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++  L+ L++  N +K LP  +  L +LREL +S+N+L+++   +     L  +++ +
Sbjct: 157 IGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLND 216

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L+ LP+ IG L+ L+ LD++NNQ + +P+    L  L+VL +  N  +  P  I +
Sbjct: 217 N--QLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQ 274

Query: 370 M 370
           +
Sbjct: 275 L 275


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  165 bits (417), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 156/265 (58%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L+L  NR+ +VPA IG L+SL+KL L  N++  +P  IG L++L  L
Sbjct: 89  VPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTEL 148

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  L +L LG N L+S+P  IG L SLK+L +  N L  +P  I
Sbjct: 149 TLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEI 208

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L +  N+L ++P  +G++  L++L +  N +  +P  +  L+SL  L +  N
Sbjct: 209 GQLAALQWLSLKDNKLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHN 268

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L K+ + +N   L ++P  IG L  L  L++  NQ+  +P     L
Sbjct: 269 QLTSVPAEIGQLTSLRKLYLDHN--KLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQL 326

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           + L+ L +  N L   P  I ++ A
Sbjct: 327 TSLKWLNLGYNQLTSVPAEIGQLAA 351



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 160/276 (57%), Gaps = 5/276 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L N  + ++   P  IG+L+SL  L L  N++ +VPA IG L+SL  L+L +NR+  +
Sbjct: 56  LHLDNNQLTSV---PAEIGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSV 112

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  IG L SL  L L GNQ++++P  + +LV L EL L  N L+S+P  IG L SL  L 
Sbjct: 113 PAEIGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLY 172

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  +P  IGQ +SL+EL +  N+L ++P  +G++  L+ LS++ N +  +P  + 
Sbjct: 173 LGCNQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIG 232

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ L ++ N+L SVP  +    +L  + +G+N   L ++P  IG L  L +L + +
Sbjct: 233 QLRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHN--QLTSVPAEIGQLTSLRKLYLDH 290

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++  +P     L+ L  L ++ N L   P  I ++
Sbjct: 291 NKLTSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQL 326



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 158/265 (59%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L  N++ +VPA IG L++L+ L L  N++  +P  IG L +L  L
Sbjct: 181 VPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALKLL 240

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  LE L LG N L+S+P  IG L SL+KL ++ N L  +P  I
Sbjct: 241 RLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEI 300

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L ++ N+L ++P  + ++ +L+ L++ YN +  +P  +  L++L+EL +  N
Sbjct: 301 GQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGN 360

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   + L K+++  N   L +LP  IG L  L EL +S+NQ+  +P     L
Sbjct: 361 QLTSVPAEVGRLSALRKLSLSRN--RLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQL 418

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
             L++L +  N L   P  I ++ +
Sbjct: 419 RALKLLILLGNQLTSVPAEIGQLAS 443



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/306 (34%), Positives = 160/306 (52%), Gaps = 48/306 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL +L L  N++ +VPA IG L+SL+KL L  N++  +P  IG L SLV L
Sbjct: 250 VPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPVEIGQLTSLVRL 309

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK---------------- 211
           +L GNQ++++P  + +L  L+ L+LG N L+S+P  IG L +LK                
Sbjct: 310 ELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEV 369

Query: 212 -------KLIVETNDLEELPHTIGQCSSLRELRVD-----------------------YN 241
                  KL +  N L  LP  IGQ +SLRELR+                         N
Sbjct: 370 GRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGN 429

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +L ++P  +G++ +L  L +R N +  +P  +  L+SL  L ++ N+L S+P  +   T+
Sbjct: 430 QLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTS 489

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           LV+  +G N   L ++P  IG L  L  LD+ +NQ+  +P     L+ LR L V  N L 
Sbjct: 490 LVESLLGGN--QLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALT 547

Query: 362 VPPRNI 367
           + P  I
Sbjct: 548 LLPAEI 553



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L  LDL    + +VPA IG L+SL  L L  N++  +P  IG L SL +L
Sbjct: 20  VPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTHL 79

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++++P  + +L  L  L+L SN L+S+P  IG L SL+KL +E N L  +P  I
Sbjct: 80  YLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAEI 139

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L EL +  N+L ++P  +G++ +L  L +  N +  +P  +  L+SL+EL +  N
Sbjct: 140 GQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLTSLKELTLYGN 199

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +     L  +++ +N   L ++P  IG L  L+ L ++ NQ+  +P     L
Sbjct: 200 QLTSVPAEIGQLAALQWLSLKDN--KLTSVPAEIGQLRALKLLRLNGNQLTSVPAEIGQL 257

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L +  N L   P  I ++
Sbjct: 258 ASLENLLLGHNQLTSVPAEIGQL 280



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 154/265 (58%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L  L LS NR+ ++PA IG L+SL++L L  N++  +P  IG L +L  L
Sbjct: 365 VPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLL 424

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  L  L L  N L+ +P  IG L SL+ L +  N L  LP  I
Sbjct: 425 ILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEI 484

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL E  +  N+L ++P  +G++ +L  L +  N +  +P  +  L++LREL+VS N
Sbjct: 485 GQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRN 544

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P  +   T+L  + +  N  +L ++P  IG L  L+EL +++NQ+  LP    +L
Sbjct: 545 ALTLLPAEIGRLTSLKGLYLDEN--ELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLL 602

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
             L +LR+  N L   P  I ++ A
Sbjct: 603 IWLHILRLGGNQLTSMPAAIRKLKA 627



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I +L+SL  L+L  N++ +VPA IG L++LK+L L+ N++  +P  +G L +L  L
Sbjct: 319 VPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRKL 378

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++++LP  + +L  L EL L  N L+S+P  IG L +LK LI+  N L  +P  I
Sbjct: 379 SLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLTSVPAEI 438

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  NRL  +P  +G++ +LE L +  N +  LP  +  L+SL E  +  N
Sbjct: 439 GQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLLGGN 498

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L  +++ +N   L ++P  +G L  L EL++S N + +LP     L
Sbjct: 499 QLTSVPAEIGQLTSLTHLDLVDN--QLTSVPAEVGRLTALRELNVSRNALTLLPAEIGRL 556

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L + EN L   P  I ++
Sbjct: 557 TSLKGLYLDENELTSVPAEIGQL 579



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/264 (38%), Positives = 150/264 (56%), Gaps = 7/264 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           EV      R L+L +N+L      LP  IG+L+SL  L LS+N++ +VPA IG L +LK 
Sbjct: 368 EVGRLSALRKLSLSRNRLTS----LPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKL 423

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++  +P  IG L SLV L LR N+++ +P  + +L  LE L L  N L+SLP  
Sbjct: 424 LILLGNQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAE 483

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L SL + ++  N L  +P  IGQ +SL  L +  N+L ++P  VG++  L  L+V  
Sbjct: 484 IGQLTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSR 543

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L+SL+ L +  NEL SVP  +   T+L ++ + +N   L +LP  IG 
Sbjct: 544 NALTLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDN--QLTSLPAEIGL 601

Query: 324 LEMLEELDISNNQIRVLPDSFRML 347
           L  L  L +  NQ+  +P + R L
Sbjct: 602 LIWLHILRLGGNQLTSMPAAIRKL 625


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  165 bits (417), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/268 (41%), Positives = 159/268 (59%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D I+ LP+++G LS+L +L LS  RI  +P ++  L  + KL L  NRI + P  I  L 
Sbjct: 244 DRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQIGKLALDNNRIEKFPAVITKLS 303

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SLVYL L+ NQ+  LP ++  L +L  L L +N+L  LPDSIG+L  L  L V  N L+ 
Sbjct: 304 SLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDA 363

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TIG+ S LREL ++ N+L  LP+ V +I TL  L + YN +  LP  +S+L  L  L
Sbjct: 364 LPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLL 423

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S+N+L+ +P+SL     L ++++  N   L  LP  IGNL  L  L++S NQ++VLP 
Sbjct: 424 NLSYNQLQVLPKSLGKLKNLHQLSVDGN--KLTHLPPGIGNLHRLSLLNLSYNQLQVLPK 481

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S   L  L  L V  N L   P+ I ++
Sbjct: 482 SLGKLKNLHQLSVDGNKLTELPKIIYDL 509



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 158/281 (56%), Gaps = 25/281 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LPDSIG L+ L+ L ++ N++ A+PATIG LS L++L+L  N++  LP  +  +L
Sbjct: 336 NHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQIL 395

Query: 163 SLVYLDLR-----------------------GNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L  L L                         NQ+  LP +L +L  L +L +  N L+ 
Sbjct: 396 TLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTH 455

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG+L  L  L +  N L+ LP ++G+  +L +L VD N+L  LP+ +  +  L +L
Sbjct: 456 LPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLKKLFLL 515

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           S+ YN +  LP ++  LS +  L++  N+L  +PES+   + +V +N+  N   L  LP+
Sbjct: 516 SLNYNALTALPESIGQLSKVVHLNLEGNQLTQLPESIGQLSKVVHLNLEGN--QLTQLPK 573

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           SIGN+  L  L++ NNQ+  LP + + L  LR L + +NP+
Sbjct: 574 SIGNMRSLYALNLKNNQLTKLPQTIQKLRGLRFLLLDKNPI 614



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 154/268 (57%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+SIG L  L  L LS N +  +P +IG L+ L  L +  N++  LP +IG L 
Sbjct: 313 NQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKLS 372

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L  NQ+S LP  +++++ L +L L  N L+ LP  + +L  L  L +  N L+ 
Sbjct: 373 ELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNKLTHLPPKLSNLQQLSLLNLSYNQLQV 432

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++G+  +L +L VD N+L  LP  +G +H L +L++ YN ++ LP ++  L +L +L
Sbjct: 433 LPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQLQVLPKSLGKLKNLHQL 492

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L  +P+ +     L  +++  N+  L ALP SIG L  +  L++  NQ+  LP+
Sbjct: 493 SVDGNKLTELPKIIYDLKKLFLLSL--NYNALTALPESIGQLSKVVHLNLEGNQLTQLPE 550

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S   LS++  L ++ N L   P++I  M
Sbjct: 551 SIGQLSKVVHLNLEGNQLTQLPKSIGNM 578



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 112/218 (51%), Gaps = 21/218 (9%)

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +  LP  + ++ +++ L L SN L+ +P  I  L  L++L +  N L E P  I   ++L
Sbjct: 154 LEKLPPLVFQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTL 213

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           + L +  N+   +P  +GK+  L   +++ + IK LP TM +LS+L+ L +S   ++ +P
Sbjct: 214 KSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLP 273

Query: 294 ESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGNLEMLEELDI 332
           ES+     + K+ + NN  +                     L+ LP SIGNL  L  L +
Sbjct: 274 ESMQQLKQIGKLALDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSL 333

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           SNN ++ LPDS   L++L VL V  N L+  P  I ++
Sbjct: 334 SNNHLKKLPDSIGNLAQLMVLSVARNQLDALPATIGKL 371



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/153 (26%), Positives = 87/153 (56%), Gaps = 2/153 (1%)

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           LE+LP  + Q   ++ L +  NRL  +P  + ++  L+ L++  N + + P  ++ L++L
Sbjct: 154 LEKLPPLVFQIPKIQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTL 213

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + L++S N+   VP ++   + LV   + ++   ++ALP ++G L  L+ L +S+ +I+ 
Sbjct: 214 KSLNLSGNKFHCVPVNIGKLSKLVTFTLKSD--RIKALPETMGTLSNLQNLTLSSCRIQQ 271

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LP+S + L ++  L +  N +E  P  I ++ +
Sbjct: 272 LPESMQQLKQIGKLALDNNRIEKFPAVITKLSS 304


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/258 (39%), Positives = 153/258 (59%), Gaps = 2/258 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G L+ L  LDLS NR+ A+P  +G L+ L  L+L  NR+  LPD++G+L SL  L
Sbjct: 161 LPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKL 220

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ALP  L  L  L ELDL SN L++LPD++G+L SL  L +  N L  LP T+
Sbjct: 221 SLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETL 280

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  ++L EL +  NRL  LPE +G +  L       N +  +P  +  ++ L  L +S N
Sbjct: 281 GNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGN 340

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P++L   T+L  +++  N   L ALP ++GNL  L +L++ NN++  LP+S   L
Sbjct: 341 RLTTLPDTLGNLTSLTMLSLYGN--QLTALPETLGNLTDLTDLELWNNRLTALPESLGDL 398

Query: 348 SRLRVLRVQENPLEVPPR 365
             L  + +  NP++   R
Sbjct: 399 PDLTWINLSGNPIDADDR 416



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 167/299 (55%), Gaps = 24/299 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+S+  L+ L  LDLSEN +  +P+++  L +L +L+L AN +  + D++GDL++L  L
Sbjct: 35  IPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVL 94

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL-----------IVE 216
           DLR N +S  P +L  L+ L EL+L  N LS+LPD++ +L +L +L              
Sbjct: 95  DLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFP 154

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           T  L  LP  +G  + L EL +  NRL ALPE +G +  L +L++  N +  LP T+ +L
Sbjct: 155 TLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNL 214

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           +SL +L +  N+L ++PE+L   T L ++++ +N   L  LP ++GNL  L  L +  NQ
Sbjct: 215 ASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNR--LTTLPDTLGNLASLTMLSLYGNQ 272

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPR---NIVEMGA--------QAVVQYMADLVE 384
           +  LP++   L+ L  L +  N L   P    N+ ++           AV +++ D+ +
Sbjct: 273 LTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITD 331



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/274 (34%), Positives = 152/274 (55%), Gaps = 13/274 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  +P S+  L +L  L+L  N +  V  T+G L +L+ LDL  N + + PDS+G+L+
Sbjct: 53  NNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVLDLRENGLSQAPDSLGNLI 112

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGS-----------NNLSSLPDSIGSLISLK 211
           +L  L+L  N +SALP  L  L  L  L+L S             L++LP+ +G+L  L 
Sbjct: 113 ALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEWLGNLTDLT 172

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  +G  + L  L +  NRL  LP+ +G + +L  LS+  N +  LP 
Sbjct: 173 ELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYGNQLTALPE 232

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           T+ +L+ L ELD+S N L ++P++L    +L  +++  N   L ALP ++GNL  L ELD
Sbjct: 233 TLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGN--QLTALPETLGNLTNLTELD 290

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           +S+N++  LP+    L+ L      +N L   P 
Sbjct: 291 LSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPE 324



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/313 (30%), Positives = 154/313 (49%), Gaps = 36/313 (11%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATI--------------------------------- 135
           PDS+G L +L  L+LSEN + A+P T+                                 
Sbjct: 105 PDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFPTLGLTTLPEW 164

Query: 136 -GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            G L+ L +LDL +NR+  LP+ +G+L  L  L+L GN+++ LP  L  L  L +L L  
Sbjct: 165 LGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNLASLTKLSLYG 224

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N L++LP+++G+L  L +L + +N L  LP T+G  +SL  L +  N+L ALPE +G + 
Sbjct: 225 NQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTALPETLGNLT 284

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L  L +  N +  LP  + +L+ L       N L +VPE L   T L  + +  N   L
Sbjct: 285 NLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSGNR--L 342

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             LP ++GNL  L  L +  NQ+  LP++   L+ L  L +  N L   P ++ ++    
Sbjct: 343 TTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALPESLGDLPDLT 402

Query: 375 VVQYMADLVEKRD 387
            +    + ++  D
Sbjct: 403 WINLSGNPIDADD 415



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 55/107 (51%), Gaps = 2/107 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           + ++P ++S L+ L  LD+S N L  +P SL     L ++N+  NF  L  +  ++G+L 
Sbjct: 32  LSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANF--LETVSDTLGDLV 89

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            LE LD+  N +   PDS   L  L  L + EN L   P  +  + A
Sbjct: 90  TLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTA 136


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  164 bits (416), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/341 (32%), Positives = 171/341 (50%), Gaps = 47/341 (13%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           LIE ++      L+L N     +  LP  IG L+ L  L L  N++  +P  IG L++LK
Sbjct: 9   LIEQAANDKVTSLDLHNH---QLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLK 65

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL  N++  LP+ IG+L +L  L L  NQ++ALP  +  L  L  L L SN L++LP+
Sbjct: 66  ELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPE 125

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG LI+L +L + +N L  LP  IG  + L  L  D N+L  LP+ +G    L  LS+ 
Sbjct: 126 EIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLSLD 185

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN------------ 310
            N +++LP  + +L++L  L +  N+L S+P+ +   T L ++++ NN            
Sbjct: 186 NNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDNNKLTELLKEIGNL 245

Query: 311 --------------------------------FADLRALPRSIGNLEMLEELDISNNQIR 338
                                              L +LP +IGNL  L +L + +NQ+ 
Sbjct: 246 THLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLTHLTKLSLYSNQLT 305

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            LP    +L+ L  L +  NPL  PP  I++ G QA++ Y+
Sbjct: 306 ALPKEIGILTNLTSLSLDNNPLTSPPSEIIQQGTQAILAYL 346


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  164 bits (416), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 97/264 (36%), Positives = 145/264 (54%), Gaps = 4/264 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L  N++  +P  IG L +L  LDL  N++  LP  IG L +L  L
Sbjct: 272 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 331

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+ELDL +N L++LP  IG L +L+ L +  N L   P  I
Sbjct: 332 GLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 391

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L++L + YNRL  LP+ +G++  L+ LS+ YN +  LP  +  L +L  L++S N
Sbjct: 392 GQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSEN 451

Query: 288 ELESVPESLCFATTLVKMNIGNN-FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            L ++P+ +     L K+++  N FA     P+ IG L+ L  LD+ NNQ+  LP     
Sbjct: 452 RLATLPKEIGQLQNLQKLDLDTNRFA---TFPKEIGQLQNLYNLDLGNNQLTALPKEIAQ 508

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           L  L  L +  N L   P+ I ++
Sbjct: 509 LKNLYDLDLNTNQLTTLPKEIGQL 532



 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/290 (35%), Positives = 158/290 (54%), Gaps = 6/290 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  +DL+L     + +  LP  IG+L +L +LDL  N++  +P  IG 
Sbjct: 268 QLATLPAEIGQLKKLQDLSLG---RNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQ 324

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L  L L  N++   P  IG L +L  LDL  N+++ALP  + +L  LE L+L  N L
Sbjct: 325 LKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQL 384

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++ P  IG L  L+ L +  N L  LP  IGQ  +L+ L + YNRL  LP+ +G++  LE
Sbjct: 385 TTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLE 444

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +L++LD+  N   + P+ +     L  +++GNN   L AL
Sbjct: 445 NLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNN--QLTAL 502

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P+ I  L+ L +LD++ NQ+  LP     L  L  L +  N L   P+ I
Sbjct: 503 PKEIAQLKNLYDLDLNTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 552



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 160/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L +L LSEN++   P  IG L +L++L
Sbjct: 114 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 170

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  LP  IG L +L  L+L  NQ++  P  + +L +L++L LG N L++ P  I
Sbjct: 171 NLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 230

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +   IGQ  +L +L + YN+L  LP  +G++  L+ LS+  N
Sbjct: 231 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 290

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  LD+  N+L ++P+ +     L  + +G N   L   P+ IG L
Sbjct: 291 QLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN--QLTTFPKEIGQL 348

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           E L+ELD+ NN++  LP     L  L  L + EN L   P+ I ++
Sbjct: 349 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 394



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 149/268 (55%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I KL +L +L+L +N++  +P  IG L +L+KL+L  NR+  LP  IG L 
Sbjct: 60  QNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQ 119

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L+ NQ++ LPV + +L  L+ L L  N L++ P  IG L +L++L ++ N L  
Sbjct: 120 NLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTA 179

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L  L +  N+L   P+ +G++  L+ L +  N +   P  +  L +L+ L
Sbjct: 180 LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQML 239

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+ +N+ ++V + +     L+++N+   +  L  LP  IG L+ L++L +  NQ+  LP 
Sbjct: 240 DLCYNQFKTVSKEIGQLKNLLQLNLS--YNQLATLPAEIGQLKKLQDLSLGRNQLTTLPK 297

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L  L +  N L   P+ I ++
Sbjct: 298 EIGQLKNLYNLDLGTNQLTTLPKEIGQL 325



 Score =  138 bits (347), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 150/286 (52%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  +DL L     + +   P  IG+L +L  LDL  N+   V   IG L +L +L
Sbjct: 206 EIGQLKKLQDLGLG---RNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 262

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L  L  L L  NQ++ LP  + +L  L  LDLG+N L++LP  I
Sbjct: 263 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 322

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  L +  N L   P  IGQ  +L+EL +  NRL ALP+ +G++  LE L +  N
Sbjct: 323 GQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN 382

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L  L++L +S+N L  +P+ +     L  +++   +  L  LP+ IG L
Sbjct: 383 QLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLS--YNRLTTLPKEIGQL 440

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LE L++S N++  LP     L  L+ L +  N     P+ I ++
Sbjct: 441 KNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFPKEIGQL 486



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 119/215 (55%), Gaps = 2/215 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  IG+L +L  LDL  NR+ A+P  IG L +L+ L+L  N++   P  IG L  L  L
Sbjct: 341 FPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDL 400

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++  LP  + +L  L+ L L  N L++LP  IG L +L+ L +  N L  LP  I
Sbjct: 401 GLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEI 460

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +D NR    P+ +G++  L  L +  N +  LP  ++ L +L +LD++ N
Sbjct: 461 GQLQNLQKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTN 520

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           +L ++P+ +     L  + +G N   L  LP+ IG
Sbjct: 521 QLTTLPKEIGQLKNLYNLGLGTN--QLTTLPKEIG 553



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 25/250 (10%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  
Sbjct: 55  LNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 114

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L++++
Sbjct: 115 IGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKW 174

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L  L++S N+L + P+ +     L  + +G N   L   P+ IG 
Sbjct: 175 NRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRN--QLTTFPKEIGQ 232

Query: 324 LEMLEELDI-----------------------SNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           L+ L+ LD+                       S NQ+  LP     L +L+ L +  N L
Sbjct: 233 LKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQL 292

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 293 TTLPKEIGQL 302



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 108/201 (53%), Gaps = 2/201 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L++  L+L G   + LP  + +L  L+ L+L  N L++LP  IG L +L+K
Sbjct: 41  DLTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEK 100

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +  N +   P  
Sbjct: 101 LNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKE 160

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL++ +N L ++P+ +     L  + +  N   L   P+ IG L+ L++L +
Sbjct: 161 IGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSEN--QLTTFPKEIGQLKKLQDLGL 218

Query: 333 SNNQIRVLPDSFRMLSRLRVL 353
             NQ+   P     L  L++L
Sbjct: 219 GRNQLTTFPKEIGQLKNLQML 239


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/325 (33%), Positives = 173/325 (53%), Gaps = 13/325 (4%)

Query: 54  FRNKVPI---MIMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLMDNI 105
           FRN   I   +++C CC  +  E      L   ++  +       G R+    N   D +
Sbjct: 12  FRNIGVIFSTILLCFCCTIEAKENGVYYNLTEALQHPTDVQYLYLGPRERKNSN---DPL 68

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IGKL +L  LDLS N+++ +P  IG L  L+KL+L  NR+  LP+ IG L +L 
Sbjct: 69  WTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQ 128

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L L  NQ++ LP  + +L  L+EL+LG N L++LP  I  L  L++L + +N L  LP 
Sbjct: 129 ELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPE 188

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG+  +L++L +  N+L ALP+ + K+  L+ L +  N +  LP  +  L +LR+L + 
Sbjct: 189 EIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLE 248

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++ + +     L  + +G N   L  LP+ IG L+ L+ L +  +Q+  LP    
Sbjct: 249 GNQLTTLSKEIGKLQNLRDLYLGGN--QLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGIE 306

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  LR L ++ N L   P+ I ++
Sbjct: 307 KLQNLRDLYLENNQLTTLPKGIEKL 331



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/283 (34%), Positives = 165/283 (58%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L+L+N   + +  LP+ IGKL +L  L+L  N++ A+P  I  L  L++L
Sbjct: 120 EIGKLQNLQELHLEN---NQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQEL 176

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L++NR+  LP+ IG L +L  L+L  NQ++ALP  + +L +L++L L SN L++LP+ I
Sbjct: 177 HLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEI 236

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +E N L  L   IG+  +LR+L +  N+L  LP+ +GK+  L+ L +  +
Sbjct: 237 EKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGS 296

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +LR+L +  N+L ++P+ +     L ++ + +N   L  LP  I  L
Sbjct: 297 QLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSN--KLTTLPEEIEKL 354

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L+ LD+S N++  LP     L +LR L +  N L+  P  I
Sbjct: 355 QKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEI 397



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 101/287 (35%), Positives = 159/287 (55%), Gaps = 7/287 (2%)

Query: 85  EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +  RDL+L  N+LM     LP  IGKL  L  L+L+ NR+  +P  IG L +L++
Sbjct: 74  EIGKLQNLRDLDLSSNQLMT----LPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQE 129

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++  LP+ IG L +L  L+L  NQ++ALP  + +L +L+EL L SN L++LP+ 
Sbjct: 130 LHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEE 189

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L+KL +  N L  LP  I +   L++L +  NRL  LPE + K+  L  L +  
Sbjct: 190 IGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEG 249

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  L   +  L +LR+L +  N+L ++P+ +     L  +++    + L  LP+ I  
Sbjct: 250 NQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEG--SQLTTLPKGIEK 307

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L +L + NNQ+  LP     L  L+ L +  N L   P  I ++
Sbjct: 308 LQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKL 354



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 144/253 (56%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L+L  N++ A+P  I  L  L++L L++NR+  LP+ I  L +L  L
Sbjct: 186 LPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDL 245

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ L   + +L  L +L LG N L++LP  IG L  L+ L +E + L  LP  I
Sbjct: 246 YLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLTTLPKGI 305

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +LR+L ++ N+L  LP+ + K+  L+ L +  N +  LP  +  L  L+ LD+S N
Sbjct: 306 EKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKN 365

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + +N   L+ LP  IGNL+ LE L++  N +   P+    L
Sbjct: 366 KLTTLPKEIGKLQKLRGLYLDHN--QLKTLPEEIGNLQSLESLNLRGNSLTSFPEEIGKL 423

Query: 348 SRLRVLRVQENPL 360
            +L+ L +  NP 
Sbjct: 424 QKLQQLYLGGNPF 436


>gi|224144293|ref|XP_002325250.1| predicted protein [Populus trichocarpa]
 gi|222866684|gb|EEF03815.1| predicted protein [Populus trichocarpa]
          Length = 345

 Score =  164 bits (415), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 113/284 (39%), Positives = 159/284 (55%), Gaps = 11/284 (3%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSL 200
           +++DL    +  +P+   +L ++  L+L  N +  +P +L+ R++ L  LD+ SN L SL
Sbjct: 11  EEVDLSGMSLETIPNPSLNLAAICKLNLSNNDLQMIPESLTARMLNLVVLDVHSNQLKSL 70

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  LK L V  N L  LP TI  C SL EL V++N+L  LP+ +G ++  L+ L
Sbjct: 71  PNSIGCLSKLKALNVSCNLLVSLPRTIENCRSLEELNVNFNKLSRLPDTIGFELVNLKKL 130

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP + S ++SL+ LD   N L S+PE L     L  +N+  NF  L  LP 
Sbjct: 131 SVNSNKLVFLPMSTSYITSLKTLDARLNNLRSLPEDLENLINLEVLNVSQNFQYLETLPY 190

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           SIG L  L ELD+S N+I  LPDS   L +L+ L V+ NPL  PP  +VE G   V +Y+
Sbjct: 191 SIGLLLSLVELDVSYNKITTLPDSMGCLRKLQKLSVEGNPLVSPPMEVVERGVHFVKEYL 250

Query: 380 ADLVEKRDAKTQPVKQKKSWVEM-----CFFSRSNKRK-RNGMD 417
           +   EK +A  +   +KKSWV        F  R   RK R G D
Sbjct: 251 S---EKMNAGHKSPTKKKSWVGKLVKYGTFSGRIGSRKDREGFD 291



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 109/165 (66%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP+SIG LS L +L++S N +V++P TI    SL++L+++ N++  LPD+IG +L
Sbjct: 65  NQLKSLPNSIGCLSKLKALNVSCNLLVSLPRTIENCRSLEELNVNFNKLSRLPDTIGFEL 124

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           ++L  L +  N++  LP++ S +  L+ LD   NNL SLP+ + +LI+L+ L V  N   
Sbjct: 125 VNLKKLSVNSNKLVFLPMSTSYITSLKTLDARLNNLRSLPEDLENLINLEVLNVSQNFQY 184

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           LE LP++IG   SL EL V YN++  LP+++G +  L+ LSV  N
Sbjct: 185 LETLPYSIGLLLSLVELDVSYNKITTLPDSMGCLRKLQKLSVEGN 229



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           ++N+  LP+ +  L +L  L++S+N   +  +P +IG L SL +LD+  N+I  LPDS+G
Sbjct: 157 LNNLRSLPEDLENLINLEVLNVSQNFQYLETLPYSIGLLLSLVELDVSYNKITTLPDSMG 216

Query: 160 DLLSLVYLDLRGNQISALPV 179
            L  L  L + GN + + P+
Sbjct: 217 CLRKLQKLSVEGNPLVSPPM 236


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 108/302 (35%), Positives = 168/302 (55%), Gaps = 31/302 (10%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L+NK +  +   P  IGKL  L  LDL  N+I  +P  IG L  L+ LDL  ++I  L
Sbjct: 55  LSLKNKGLKKV---PKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYL 111

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD+IG+L+ L +L +  N++  LP ++ +L +L+ +DL  N L+ +P  IG+L SL+ L 
Sbjct: 112 PDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLD 171

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +E N +  +P  +G  S L  L +D N++K +P A+G + +L+ L +R N I  LP  + 
Sbjct: 172 LEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELK 231

Query: 275 S--------------------------LSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           +                          L SL+ LD+S N+L  +P+ +     L  + + 
Sbjct: 232 NMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILH 291

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NN   L+ALP S+G +E LEELD+ NNQ+ VLP S   L++L+ L ++ N L V P  I 
Sbjct: 292 NN--QLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIA 349

Query: 369 EM 370
           +M
Sbjct: 350 QM 351



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/259 (35%), Positives = 146/259 (56%), Gaps = 5/259 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D I +LPD+IG L  L  L +  N++V +P +I  L+ L+ +DL  N++  +P  IG L 
Sbjct: 106 DKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALK 165

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LDL  N IS +P  L  L +LE LDL SN +  +P +IG L SLK L +  N ++ 
Sbjct: 166 SLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDS 225

Query: 223 LPHTIGQCSSLRELRVDYNRLK---ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           LP  +     L  L V  NRL    A    +GK+ +L+ L +  N + +LP  +  L +L
Sbjct: 226 LPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNL 285

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + L +  N+L+++P+SL     L ++++ NN   L  LP+S+  L  L++L + NNQ+ V
Sbjct: 286 KTLILHNNQLQALPDSLGEIENLEELDLRNN--QLTVLPKSVLQLAKLKKLILRNNQLTV 343

Query: 340 LPDSFRMLSRLRVLRVQEN 358
           LP+    +  L+ L ++ N
Sbjct: 344 LPEEIAQMKNLKELDLRGN 362



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/208 (39%), Positives = 125/208 (60%), Gaps = 3/208 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG L SL  LDL +N I  +P+ +G LS L+ LDL +N+I ++P +IG L SL YL
Sbjct: 157 IPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYL 216

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNL-SSLPDS--IGSLISLKKLIVETNDLEELP 224
            LR N I +LP  L  +V+LE L + +N L SS   S  +G L SLK L +  N L  LP
Sbjct: 217 YLRNNLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLP 276

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  +L+ L +  N+L+ALP+++G+I  LE L +R N +  LP ++  L+ L++L +
Sbjct: 277 QDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLIL 336

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFA 312
             N+L  +PE +     L ++++  NF 
Sbjct: 337 RNNQLTVLPEEIAQMKNLKELDLRGNFT 364



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 83/145 (57%), Gaps = 6/145 (4%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI---VAVPATIGGLSSLKKLDLHANRI 151
           L L+N L+D+   LPD +  +  L  L +S NR+    A    +G L SLK LDL  N++
Sbjct: 216 LYLRNNLIDS---LPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKL 272

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           + LP  I  L +L  L L  NQ+ ALP +L  +  LEELDL +N L+ LP S+  L  LK
Sbjct: 273 VRLPQDIVQLKNLKTLILHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLK 332

Query: 212 KLIVETNDLEELPHTIGQCSSLREL 236
           KLI+  N L  LP  I Q  +L+EL
Sbjct: 333 KLILRNNQLTVLPEEIAQMKNLKEL 357


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  164 bits (415), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 103/260 (39%), Positives = 156/260 (60%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++IG+L +L  L+L EN +  +P +IG L SL+KLDL  N++  LP SIG L SL  L
Sbjct: 215 LPNNIGQLKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKL 274

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP ++ +L  L++L L  N L+SL D IG L  LK L +  N L  LP++I
Sbjct: 275 DLGANQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSI 334

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SLR L +  N+L  LP++ G++  LE L++  N  + + T +  L SL++L ++ N
Sbjct: 335 GRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASN 394

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++PE++     L  + +  N  D   LP SIG L+ L+ LD+  N++  LP+S   L
Sbjct: 395 NLTTLPENIGQLPELQYLTLVRNKLD--RLPESIGQLQELQYLDLRRNRLSTLPESLGQL 452

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L  L +  NPL   P +I
Sbjct: 453 KKLEELNIGANPLVTLPNSI 472



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 165/280 (58%), Gaps = 8/280 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I    SL  L ++++ +  +P     L +LK L+L ++ ++ LP++IG L +L  L
Sbjct: 169 LPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTIL 228

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR N ++ LP ++ +L  LE+LDL  N L+ LP SIG L SLKKL +  N L  LP +I
Sbjct: 229 NLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSI 288

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L ++ N L +L + +GK+  L+VL++R N +  LP ++  L SLR L +S N
Sbjct: 289 GQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSN 348

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           +L  +P+S      L ++N+ GN F  +  +   +G L+ L++L +++N +  LP++   
Sbjct: 349 KLTRLPKSFGQLKKLEELNLEGNYFQTMLTI---LGQLKSLKKLYLASNNLTTLPENIGQ 405

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L  L+ L +  N L+  P +I   G    +QY+ DL   R
Sbjct: 406 LPELQYLTLVRNKLDRLPESI---GQLQELQYL-DLRRNR 441



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 159/292 (54%), Gaps = 26/292 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP SIG+L +L  L L  N + ++   IG L  LK L+L  NR+  LP+SIG L 
Sbjct: 279 NQLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLK 338

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL +L L  N+++ LP +  +L +LEEL+L  N   ++   +G L SLKKL + +N+L  
Sbjct: 339 SLRWLSLSSNKLTRLPKSFGQLKKLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLTT 398

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ   L+ L +  N+L  LPE++G++  L+ L +R N +  LP ++  L  L EL
Sbjct: 399 LPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEEL 458

Query: 283 DVSFNELESVPESL-------------------CFA-----TTLVKMNIGNNFADLRALP 318
           ++  N L ++P S+                    FA     T+L ++ +  N  D   LP
Sbjct: 459 NIGANPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVNRLD--TLP 516

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            SI  L+ L++L++  NQI ++P+S   L  L+ L +  N L V  +NI ++
Sbjct: 517 TSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQL 568



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 171/342 (50%), Gaps = 56/342 (16%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D IGKL  L  L+L  NR+  +P +IG L SL+ L L +N++  LP S G L  L  L+L
Sbjct: 309 DDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRLPKSFGQLKKLEELNL 368

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
            GN    +   L +L  L++L L SNNL++LP++IG L  L+ L +  N L+ LP +IGQ
Sbjct: 369 EGNYFQTMLTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQ 428

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP------------------- 270
              L+ L +  NRL  LPE++G++  LE L++  N +  LP                   
Sbjct: 429 LQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSIGKLKNLKKLYLATANQ 488

Query: 271 -----TTMSSLSSLRELDV-----------------------SFNELESVPESLCFATTL 302
                 +++ ++SL EL +                        +N++  VPES+     L
Sbjct: 489 TPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNL 548

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + +GNN   L  L ++IG LE +  LD+S+N++  LP S   L +L+ L +  N L+ 
Sbjct: 549 QALILGNN--KLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLKS 606

Query: 363 PPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQK-KSWVEMC 403
            P +I ++      + + DL  +++  +   K+K K W+  C
Sbjct: 607 LPEHIGQL------KNLKDLNLRKNPISATEKEKIKKWLPKC 642



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 150/295 (50%), Gaps = 50/295 (16%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+L  N++  +PA IG L +LKKL+L  N++  LP S   L +L  L+L  N+ + LP +
Sbjct: 42  LNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPAS 101

Query: 181 LSRLVRLEELDLGSN-NLSSLPDSIGSL-----------ISLKKL--------------- 213
           +++L  LEEL+L  N +L  LPD+I  L           +SLKKL               
Sbjct: 102 VTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNL 161

Query: 214 -------------------IVETND--LEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
                              I+  ND  L  LP    Q  +L+ L +  + L ALP  +G+
Sbjct: 162 NGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQ 221

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  L +L++R N + +LPT++  L SL +LD+  N+L  +P S+    +L K+++G N  
Sbjct: 222 LKNLTILNLRENYLTKLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGAN-- 279

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LP SIG L+ L++L +  N +  L D    L +L+VL ++ N L   P +I
Sbjct: 280 QLTTLPTSIGQLKNLQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSI 334



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 121/214 (56%), Gaps = 24/214 (11%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + ++ LP+SIG+L  L  LDL  NR+  +P ++G L  L++L++ AN ++ LP+SIG   
Sbjct: 417 NKLDRLPESIGQLQELQYLDLRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSIGKLK 476

Query: 160 ---------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
                                 + SL  L L  N++  LP ++ +L  L++L+L  N +S
Sbjct: 477 NLKKLYLATANQTPKSFASITQITSLEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQIS 536

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +P+SIG L +L+ LI+  N L  L   IGQ  S+  L +  N+L  LP+++GK+  L+ 
Sbjct: 537 IVPESIGKLKNLQALILGNNKLTVLTQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQ 596

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L++ YNN+K LP  +  L +L++L++  N + + 
Sbjct: 597 LNLSYNNLKSLPEHIGQLKNLKDLNLRKNPISAT 630



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/213 (30%), Positives = 120/213 (56%), Gaps = 6/213 (2%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           +L  AL    ++ +L+L  N L++LP +IG L +LKKL +E N L  LP +  +  +L E
Sbjct: 28  SLTEALKTPEQVYKLNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEE 87

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTMSSLSSLRELDVSFN-ELESVP 293
           L +  N+   LP +V K+  LE L++  N ++K+LP  +  L +L++L+++ N  L+ +P
Sbjct: 88  LNLTRNKFTTLPASVTKLQNLEELNLTDNLSLKKLPDNIEQLKNLQKLNLTSNLSLKKLP 147

Query: 294 ESLCFATTLVKMNIGN-NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           E++   T L K+ + N N +    LP +I   E L  L ++++ +  LP++F  L  L+V
Sbjct: 148 ENI---TQLKKLKVLNLNGSSRIILPANIQLPESLRILHMNDHLLTTLPENFSQLHNLKV 204

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           L ++ + L   P NI ++    ++    + + K
Sbjct: 205 LNLKSSGLVALPNNIGQLKNLTILNLRENYLTK 237


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 104/286 (36%), Positives = 162/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R+L L N   + +  LP  IG L +L  L L  N++  +P  IG L +L+ L
Sbjct: 39  EIWQLKNLRELRLDN---NQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYL 95

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L +L  L L  NQ++ LP  + +L  LE+LDL  N+ + LP  I
Sbjct: 96  DLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEI 155

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  LI+  N L+ LP  IGQ  +L EL +++++LK LP+ +G++  L+ LS+R N
Sbjct: 156 GRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNN 215

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  L    N+L  +P+ +     LV +++ NN   L+ LP+ +G L
Sbjct: 216 QLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNN--QLKTLPKEVGQL 273

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L EL +S NQ++ LP     L  LR L +  N LE  P+ + ++
Sbjct: 274 KNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQL 319



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 103/180 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SL +  N++  +P  IG L +L +L L  +++  LP  IG L  L +L
Sbjct: 151 LPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHL 210

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR NQ++ LP  + +L  L  L   +N L+ LP  IG L +L  L +  N L+ LP  +
Sbjct: 211 SLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEV 270

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +LREL +  N+LK LP+ VG++  L  LS+  N ++ LP  +  L +LR L +  N
Sbjct: 271 GQLKNLRELYLSANQLKTLPKEVGQLKNLRDLSLDNNQLETLPKEVGQLKNLRWLFLDAN 330



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 120/217 (55%), Gaps = 2/217 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           L  ++ + L +  LDLR  +++ LP  + +L  L EL L +N L++LP  IG L +LK L
Sbjct: 13  LTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKIL 72

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IGQ  +L  L ++ N+L  LP+ +G +  L++L +  N +  LP  +
Sbjct: 73  HLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEI 132

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L +LD+S N    +P+ +     L  + + +N   L+ LP+ IG L+ L EL + 
Sbjct: 133 WQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHN--QLKTLPKEIGQLKNLGELILE 190

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++Q++ LP     L  L+ L ++ N L + P+ I ++
Sbjct: 191 HSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQL 227



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 2/224 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL   ++  LP  I  L +L  L L  NQ++ LP  +  L  L+ L L +N L+ LP  
Sbjct: 26  LDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKE 85

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L+ L +  N L  LP  IG   +L+ L +  N+L  LP+ + ++  LE L +  
Sbjct: 86  IGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSG 145

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N+   LP  +  L +L  L +  N+L+++P+ +     L ++ +    + L+ LP+ IG 
Sbjct: 146 NSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELIL--EHSQLKTLPKEIGQ 203

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L+ L + NNQ+ +LP     L  L  L    N L V P+ I
Sbjct: 204 LKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEI 247



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 109/211 (51%), Gaps = 7/211 (3%)

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           G    AL  AL   + +  LDL    L+ LP  I  L +L++L ++ N L  LP  IG  
Sbjct: 7   GTYYKALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLL 66

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+ L +  N+L  LP+ +G++  LE L +  N +  LP  +  L +L+ L +  N+L 
Sbjct: 67  QNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLT 126

Query: 291 SVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            +P+ +     L  +++ GN+F     LP+ IG L+ L  L + +NQ++ LP     L  
Sbjct: 127 VLPKEIWQLKNLEDLDLSGNSFT---ILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKN 183

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           L  L ++ + L+  P+   E+G    +Q+++
Sbjct: 184 LGELILEHSQLKTLPK---EIGQLKDLQHLS 211


>gi|255554408|ref|XP_002518243.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
 gi|223542590|gb|EEF44129.1| leucine-rich repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/280 (39%), Positives = 160/280 (57%), Gaps = 6/280 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP    +L ++  LDL  N + ++P +L+ RL+ +  LD+ SN L S
Sbjct: 34  LEIVDLSGMSLDTLPSPSLNLATICKLDLSNNNLQSIPESLTARLLNIVILDVHSNQLKS 93

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N L  LP TI  C SL EL  ++N+L  LP  +G ++  L+ 
Sbjct: 94  LPNSIGCLSKLKVLNVAGNLLACLPKTIENCRSLEELNANFNKLSVLPNTIGFELVNLKK 153

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP +++ L+SL+ LD   N L S+PE L     L  +N+  NF  L  LP
Sbjct: 154 LSVNSNKLVFLPHSITHLTSLKTLDARLNNLRSLPEDLENLINLKVLNVSQNFQYLETLP 213

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELDIS N+I  LP+S   L +L+ L V+ NPL  PP  +VE G   V +Y
Sbjct: 214 YSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPPMEVVEQGLHTVKEY 273

Query: 379 MADLVEKRDAKTQPVKQKKSWV-EMCFFSRSNKRKRNGMD 417
           ++   EK +A  +  ++KKSWV ++  +   N   RN ++
Sbjct: 274 LS---EKMNAGHKSPQKKKSWVGKLVKYGTFNGSTRNQIN 310



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 98/174 (56%), Gaps = 6/174 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LP +I    SL  L+ + N++  +P TIG  L +LKKL +++N+++ LP SI  L SL  
Sbjct: 117 LPKTIENCRSLEELNANFNKLSVLPNTIGFELVNLKKLSVNSNKLVFLPHSITHLTSLKT 176

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDLEELP 224
           LD R N + +LP  L  L+ L+ L++  N   L +LP SIG L SL +L +  N +  LP
Sbjct: 177 LDARLNNLRSLPEDLENLINLKVLNVSQNFQYLETLPYSIGLLFSLIELDISYNRITSLP 236

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAV--GKIHTL-EVLSVRYNNIKQLPTTMSS 275
           ++IG    L++L V+ N L + P  V    +HT+ E LS + N   + P    S
Sbjct: 237 NSIGCLRKLQKLSVEGNPLVSPPMEVVEQGLHTVKEYLSEKMNAGHKSPQKKKS 290



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 34/51 (66%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP 155
           +E LP SIG L SL+ LD+S NRI ++P +IG L  L+KL +  N ++  P
Sbjct: 209 LETLPYSIGLLFSLIELDISYNRITSLPNSIGCLRKLQKLSVEGNPLVSPP 259


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/249 (37%), Positives = 152/249 (61%), Gaps = 4/249 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL+   M+ +E LP  +GKL  L  LDL  NR+  VP  +G L++LKKL
Sbjct: 249 EIGDLQQLKKLNLK---MNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKL 305

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  + +  +L  L+LRGN ++ LP  L  L +L+ L+L +N L  LP+S+
Sbjct: 306 DLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESL 365

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L++LP ++G    L+ L++  N L  LPE++GK+  LE L    N
Sbjct: 366 GKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGN 425

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++ LP ++  L  L+++++++N+L  +PESL     L  +N+ NN + L+ LP+S+GNL
Sbjct: 426 ALEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNN-STLQKLPKSLGNL 484

Query: 325 EMLEELDIS 333
           + L+   + 
Sbjct: 485 KNLQSFKMQ 493



 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 118/348 (33%), Positives = 181/348 (52%), Gaps = 6/348 (1%)

Query: 13  RLRYTIPLSNPVPFLVSFIPLFSSFCLLLTDF-LILQLGSIIFRNKVPIMIMCMCCVGQD 71
           +L+Y   + NP+  L + +   S    L  D  L++Q   +  +NK+   +         
Sbjct: 128 KLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQ 187

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDN-IEWLPDSIGKLSSLVSLDLSENRIVA 130
             KL L  L   I V   K  ++L +  KL +N +  LP  +G L SL  L L  N +  
Sbjct: 188 VYKLELHSLRQ-IPVQKLKKLKNLEVL-KLNNNALRTLPKELGSLKSLKELHLQNNLLKT 245

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           VP  IG L  LKKL+L  NR+  LP  +G L  L  LDL  N++  +P  L +L  L++L
Sbjct: 246 VPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKL 305

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DL  N L +LP  + +  +L+KL +  N L +LP  +G    L+ L +D NRL  LPE++
Sbjct: 306 DLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESL 365

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GK+  LE L +R N +K+LP ++  L  L+ L +  N L  +PES+     L  ++   N
Sbjct: 366 GKLKNLESLDLRENALKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQNLESLDSWGN 425

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  LP SIG L+ L++++++ NQ+  LP+S   L  L+ L +  N
Sbjct: 426 A--LEGLPESIGGLKKLKKMNLAYNQLTELPESLGKLENLQTLNLWNN 471



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 162/319 (50%), Gaps = 56/319 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ + KL  L +L+L+ N+I  +P  I  L+ LK L++  N I +LP  +  L  L  L
Sbjct: 96  LPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATL 155

Query: 168 D----------------------------------LRGNQISALPV-ALSRLVRLEELDL 192
                                              L  + +  +PV  L +L  LE L L
Sbjct: 156 KADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLKL 215

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            +N L +LP  +GSL SLK+L ++ N L+ +P  IG    L++L +  NR++ LP+ +GK
Sbjct: 216 NNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGK 275

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GN-- 309
           +  LE L +  N +K +P  +  L++L++LD+S N L+++P+ L  A  L K+N+ GN  
Sbjct: 276 LKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNAL 335

Query: 310 -----NFADLR-------------ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
                N  +L+              LP S+G L+ LE LD+  N ++ LP+S   L +L+
Sbjct: 336 TQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLEKLK 395

Query: 352 VLRVQENPLEVPPRNIVEM 370
            L++++N L   P +I ++
Sbjct: 396 NLQLRKNALTKLPESIGKL 414



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 25/258 (9%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
             + KL +L  L L+ N +  +P  +G L SLK+L L  N +  +P  IGDL  L  L+L
Sbjct: 202 QKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNL 261

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
           + N++  LP  L +L +LE+LDL +N L ++P  +G L                      
Sbjct: 262 KMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKL---------------------- 299

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            ++L++L +  NRL+ LP+ +     LE L++R N + QLP  + +L  L+ L++  N L
Sbjct: 300 -TALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRL 358

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
             +PESL     L  +++  N   L+ LP S+G LE L+ L +  N +  LP+S   L  
Sbjct: 359 VGLPESLGKLKNLESLDLRENA--LKKLPESLGGLEKLKNLQLRKNALTKLPESIGKLQN 416

Query: 350 LRVLRVQENPLEVPPRNI 367
           L  L    N LE  P +I
Sbjct: 417 LESLDSWGNALEGLPESI 434



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/323 (28%), Positives = 154/323 (47%), Gaps = 60/323 (18%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D ++ +   +  L++L  +DLS N++  +P  +  L  L  L+L  N+I ELP  I  L 
Sbjct: 68  DQLDSINSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLN 127

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEEL-------------------------------- 190
            L YL++ GN I  LP  L++L +L  L                                
Sbjct: 128 KLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQ 187

Query: 191 --DLGSNNLSSLP-DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD-------- 239
              L  ++L  +P   +  L +L+ L +  N L  LP  +G   SL+EL +         
Sbjct: 188 VYKLELHSLRQIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVP 247

Query: 240 ---------------YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
                           NR++ LP+ +GK+  LE L +  N +K +P  +  L++L++LD+
Sbjct: 248 KEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDL 307

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L+++P+ L  A  L K+N+  N   L  LP+++GNL+ L+ L++  N++  LP+S 
Sbjct: 308 SRNRLQNLPQELTNAQALEKLNLRGNA--LTQLPKNLGNLQQLKRLNLDANRLVGLPESL 365

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             L  L  L ++EN L+  P ++
Sbjct: 366 GKLKNLESLDLRENALKKLPESL 388



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/282 (29%), Positives = 152/282 (53%), Gaps = 26/282 (9%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           +I   + L  L L+++++ ++ + +  L++L+ +DL  N++ +LP+ +  L  L  L+L 
Sbjct: 53  NIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLA 112

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL------KKLIVET------- 217
            NQI  LP  ++RL +L+ L++  N +  LP  +  L  L      KKL+V+        
Sbjct: 113 HNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKN 172

Query: 218 ---NDLEELPHTIGQCSSLRELRVDYNRLKALP-EAVGKIHTLEVLSVRYNNIKQLPTTM 273
               +LEE   T  Q       +++ + L+ +P + + K+  LEVL +  N ++ LP  +
Sbjct: 173 KLFTNLEEALKTPAQV-----YKLELHSLRQIPVQKLKKLKNLEVLKLNNNALRTLPKEL 227

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            SL SL+EL +  N L++VP+ +     L K+N+  N  +   LP+ +G L+ LE+LD+ 
Sbjct: 228 GSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVE--GLPKELGKLKQLEQLDLY 285

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           NN+++ +P     L+ L+ L +  N L+  P+ +    AQA+
Sbjct: 286 NNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELT--NAQAL 325



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/231 (26%), Positives = 114/231 (49%), Gaps = 24/231 (10%)

Query: 157 SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
           ++ D   +  LDL G ++ A+   +    RL+EL L  + L S+   + +L +L+ + + 
Sbjct: 30  ALKDPTKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLS 89

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N L +LP  + +   L  L + +N++K LP  + +++ L+ L++  N IK+LP  ++ L
Sbjct: 90  HNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQL 149

Query: 277 SS----------------LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP-R 319
           S                 LR+ +  F  LE   E+L     + K+ +      LR +P +
Sbjct: 150 SQLATLKADKKLLVQWEMLRKKNKLFTNLE---EALKTPAQVYKLEL----HSLRQIPVQ 202

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +  L+ LE L ++NN +R LP     L  L+ L +Q N L+  P+ I ++
Sbjct: 203 KLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDL 253



 Score = 43.1 bits (100), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K +   +   + L+EL ++ ++L+S+   +   T L  +++ +N   L  LP  +  L 
Sbjct: 47  LKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDLSHN--QLGKLPEFLFKLR 104

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
            L  L++++NQI+ LP     L++L+ L +  NP++  P  + ++   A ++
Sbjct: 105 HLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATLK 156


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 159/276 (57%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  N++  +P  IG L +L+ L
Sbjct: 87  EIGQLKNLRKLNLYD---NQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N+   +P  IG L +L  L+L  NQ++ALP  + +L  L+ L LGSN L++LP+ I
Sbjct: 144 ELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP+ IGQ  +L+ L +  N+L  LP  +G++  L+ L +RYN
Sbjct: 204 GQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
               LP  +  L +L+ L++++N+L+++P+ +     L  +++G  +     LP  IG L
Sbjct: 264 QFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLG--YNQFTILPEEIGKL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+EL + +NQ+  +P+    L  L+ L +++N L
Sbjct: 322 KNLQELYLRDNQLTTIPEEIGQLQNLQELYLRDNQL 357



 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 164/286 (57%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 64  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKEL 120

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP+ IG L +L  L+L  NQ   +P  + +L  L+ L+LG N L++LP+ I
Sbjct: 121 YLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEI 180

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  LP+ IGQ  +L+ L +  NRL  LP  +G++  L+ L +  N
Sbjct: 181 GQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSN 240

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L + +N+  ++P+ +     L ++ +  N+  L+ LP+ IG L
Sbjct: 241 QLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLEL--NYNQLKTLPKGIGQL 298

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+  NQ  +LP+    L  L+ L +++N L   P  I ++
Sbjct: 299 QNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIPEEIGQL 344



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 141/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L + Y
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G++  L+ L +  N +  LP  +  L +L+ L +S N L ++P  +    
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + +G+N   L  LP  IG L+ L+ L +  NQ   LP     L  L+ L +  N L
Sbjct: 231 NLQSLYLGSN--QLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQL 288

Query: 361 EVPPRNIVEM 370
           +  P+ I ++
Sbjct: 289 KTLPKGIGQL 298



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 119/207 (57%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  LP+ IG+L +L SL L  N++ A+P  IG L +L+ L
Sbjct: 156 EIGQLKNLQTLNLG---YNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L L  N  ++LP  I
Sbjct: 213 YLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L+ LP  IGQ  +L+ L + YN+   LPE +GK+  L+ L +R N
Sbjct: 273 GKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  +P  +  L +L+EL +  N+L S
Sbjct: 333 QLTTIPEEIGQLQNLQELYLRDNQLSS 359



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  N+L  LP  +G++  L VL + +N  K +P  
Sbjct: 97  LNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++ +N+L ++P  +     L  + +G+N   L ALP  IG L+ L+ L +
Sbjct: 157 IGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSN--QLTALPNEIGQLQNLQSLYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP+    L  L+ L +  N L + P  I ++
Sbjct: 215 STNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQL 252


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  163 bits (413), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/361 (32%), Positives = 188/361 (52%), Gaps = 41/361 (11%)

Query: 54  FRNK---VPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLMDNI 105
           FRN    + I+++C CC  +  EK     L   ++  +       G R+    N   D +
Sbjct: 68  FRNIGVILSIILLCFCCTIEAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSN---DPL 124

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG------ 159
             LP  IGKL +L  LDLS N+++ +P  IG L +L+KL+L  NR+  LP+ IG      
Sbjct: 125 WTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQ 184

Query: 160 -----------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
                             L +L +L L  NQ++ LP  + +L +LE L L +N L++LP 
Sbjct: 185 ELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPK 244

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IG+   L+EL ++ N+L  LP+ +GK+  L+ L + 
Sbjct: 245 EIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLD 304

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN +  LP  +  L  L++L  S N+  +VPE +     L  +N+ +N   L +LP+ IG
Sbjct: 305 YNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN--QLTSLPKEIG 362

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ--YMA 380
           NL+ L+ L +S+NQ+  LP     L  L++L + +N L   P+   E+G    +Q  Y++
Sbjct: 363 NLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPK---EIGKLQNLQELYLS 419

Query: 381 D 381
           D
Sbjct: 420 D 420



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 145/274 (52%), Gaps = 12/274 (4%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N++WL          P  IGKL  L +L L  N++  +P  IG L +L+ L L  N++
Sbjct: 203 LQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQL 262

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L  L  L L  NQ++ LP  + +L  L+EL L  N L++LP+ I  L  LK
Sbjct: 263 TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLK 322

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           KL    N    +P  I    +L+ L +  N+L +LP+ +G +  L++L +  N +  LP 
Sbjct: 323 KLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPK 382

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ L +S N+L ++P+ +     L ++ + +N   L  LP+ I NL+ LE L 
Sbjct: 383 EIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDN--QLATLPKEIENLQSLEYLY 440

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           +S+N +   P+    L  L+ LR++  P  +P +
Sbjct: 441 LSDNPLTSFPEEIGKLQHLKWLRLENIPTLLPQK 474


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 167/283 (59%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV + +  R+LNL+N   + +  LP+ IG+L +L  L L  NR+  +P  +G L +L++L
Sbjct: 56  EVGTLQNLRELNLEN---NQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLREL 112

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP+ IG L +L  L+L  N++ +LP  + +L +LE L LG N L +LP  I
Sbjct: 113 NLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEI 172

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L  L++L +  + L+  P  IG+  SL+ L +D N+L  L + +GK+ +LE L +  N
Sbjct: 173 GTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENN 232

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L EL++S N+L ++P+ +     L  +++ +N    R LP+ I  L
Sbjct: 233 QLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN--QFRTLPKQIWQL 290

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L++L +++NQ+ VLP     L  L+ L +  N L+  P+ I
Sbjct: 291 QNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEI 333



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/265 (37%), Positives = 149/265 (56%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D ++  P+ IGKL SL  L L  N++V +   IG L SL++L L  N++  LP+ IG L 
Sbjct: 186 DQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQ 245

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ+  LP  +  L  L+ L L SN   +LP  I  L +L+ L +  N L  
Sbjct: 246 NLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTV 305

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+LK+LP+ +GK+  L+ L +  N +  LP  +  L  L +L
Sbjct: 306 LPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDL 365

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P+ +     L  +++ NN   LR LP  IG L+ LE LD+SNNQ+R+LP 
Sbjct: 366 YLEDNQLTTLPKEIWKLEKLKYLDLANN--QLRLLPEEIGKLQKLEYLDLSNNQLRLLPQ 423

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L +L+ L +  N L   P+ I
Sbjct: 424 KIGKLEKLKYLDLSNNQLATLPKEI 448



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L LS +++   P  IG L SLK+L L +N+++ L   IG L SL  L
Sbjct: 168 LPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERL 227

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  LEEL+L +N L +LP  IG+L +L+ L + +N    LP  I
Sbjct: 228 ILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQI 287

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L++L + +N+L  LP+ +G++  L+ L +  N +K LP  +  L  L+ L ++ N
Sbjct: 288 WQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANN 347

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  + + +N   L  LP+ I  LE L+ LD++NNQ+R+LP+    L
Sbjct: 348 QLTVLPQEIGQLEKLEDLYLEDN--QLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKL 405

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L  L +  N L + P+ I
Sbjct: 406 QKLEYLDLSNNQLRLLPQKI 425



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  L   +G L +L  L+L  N++  +P  IG L +L+ L L+ NR+  LP  +G L 
Sbjct: 48  DQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQ 107

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP  + +L  L+ L+L +N L SLP  IG L  L++L +  N L  
Sbjct: 108 NLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLYLGGNQLRT 167

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L EL +  ++LK  PE +GK+ +L+ L +  N +  L   +  L SL  L
Sbjct: 168 LPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERL 227

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P  +     L ++N+ NN   L  LP+ IG LE L+ L + +NQ R LP 
Sbjct: 228 ILENNQLATLPNEIGKLQNLEELNLSNN--QLVTLPQEIGALENLQNLHLYSNQFRTLPK 285

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L V P+ I ++
Sbjct: 286 QIWQLQNLQDLHLAHNQLTVLPQEIGQL 313



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 132/234 (56%), Gaps = 2/234 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L+LS N++V +P  IG L +L+ L L++N+   LP  I  L +L  L
Sbjct: 237 LPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNLQDL 296

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L L  N L SLP  IG L  LK LI+  N L  LP  I
Sbjct: 297 HLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLPQEI 356

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L +L ++ N+L  LP+ + K+  L+ L +  N ++ LP  +  L  L  LD+S N
Sbjct: 357 GQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLPEEIGKLQKLEYLDLSNN 416

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           +L  +P+ +     L  +++ NN   L  LP+ IG LE LE+LD+S N     P
Sbjct: 417 QLRLLPQKIGKLEKLKYLDLSNN--QLATLPKEIGKLEKLEDLDLSGNPFTTFP 468



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/318 (31%), Positives = 168/318 (52%), Gaps = 31/318 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV + +  R+LNL+N   + +  LP+ IG+L +L +L+L  NR+ ++P  IG L  L++L
Sbjct: 102 EVGTLQNLRELNLEN---NQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERL 158

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALP-------------------VALS--- 182
            L  N++  LP  IG L  L  L L  +Q+   P                   V LS   
Sbjct: 159 YLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI 218

Query: 183 -RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            +L  LE L L +N L++LP+ IG L +L++L +  N L  LP  IG   +L+ L +  N
Sbjct: 219 GKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN 278

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           + + LP+ + ++  L+ L + +N +  LP  +  L +L+ L ++ N+L+S+P+ +     
Sbjct: 279 QFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQK 338

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  + + NN   L  LP+ IG LE LE+L + +NQ+  LP     L +L+ L +  N L 
Sbjct: 339 LKWLILANN--QLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLR 396

Query: 362 VPPRNIVEMGAQAVVQYM 379
           + P    E+G    ++Y+
Sbjct: 397 LLPE---EIGKLQKLEYL 411



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 134/273 (49%), Gaps = 45/273 (16%)

Query: 143 KLDLHANRII-ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K D   N++  +L  ++ + + +  L L  +Q+  L   +  L  L EL+L +N L++LP
Sbjct: 18  KCDAEDNKVYRDLDAALKNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLP 77

Query: 202 DSI-----------------------GSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           + I                       G+L +L++L +E N L  LP+ IGQ  +L+ L +
Sbjct: 78  NEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNL 137

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             NRLK+LP+ +GK+  LE L +  N ++ LP  + +L  L EL +S ++L++ PE +  
Sbjct: 138 HNNRLKSLPKEIGKLQKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGK 197

Query: 299 ATTLVKMNIGNN--------FADLRA-------------LPRSIGNLEMLEELDISNNQI 337
             +L ++ + +N           LR+             LP  IG L+ LEEL++SNNQ+
Sbjct: 198 LRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQL 257

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP     L  L+ L +  N     P+ I ++
Sbjct: 258 VTLPQEIGALENLQNLHLYSNQFRTLPKQIWQL 290


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 151/260 (58%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L LS N++   P  IG L +L++L L  N++  LP+ IG L +L  L
Sbjct: 103 LPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVL 162

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L +LE L L  N L +L   IG L  L+ L +  N L  LP  I
Sbjct: 163 DLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEI 222

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LREL +  N+LK LP  +G++  L+VL +  N +K LP  +  L +L+EL +  N
Sbjct: 223 GELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTN 282

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  +++  +  +L+ LP+ IG L+ L  LD+ NN+++ LP     L
Sbjct: 283 QLKTLPKEIGELQNLTVLDL--HINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGEL 340

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L VL ++ N L+  P  I
Sbjct: 341 QSLTVLDLRNNELKTLPNEI 360



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/321 (33%), Positives = 173/321 (53%), Gaps = 6/321 (1%)

Query: 57  KVPIMIMCMCCVGQDGEKLSLIKLASLIE-VSSKKGTRDLNLQNKLMDNIEWLPDSIGKL 115
           K+  +I+ + C     +   +    +L E + +    R L+L NK    +  LP  IG+L
Sbjct: 8   KIGTLILILLCFLSQLKAQEIGTYHNLTEALQNPTDVRILDLSNK---RLTTLPKEIGEL 64

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
            +L  L+L  N++  +P  IG L +L+ L+L  N+   LP+ IG L +L  L L  NQ++
Sbjct: 65  QNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLT 124

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
             P  + +L  L EL L  N L++LP+ IG L +L+ L +E N L  LP+ IG+   L  
Sbjct: 125 TFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLER 184

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+LK L + +G +  L+VL +  N +  LP  +  L +LREL +  N+L+++P  
Sbjct: 185 LSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPND 244

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L  ++IG+N   L+ LP+ IG L+ L+EL +  NQ++ LP     L  L VL +
Sbjct: 245 IGELKNLQVLHIGSN--QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDL 302

Query: 356 QENPLEVPPRNIVEMGAQAVV 376
             N L+  P+ I E+    V+
Sbjct: 303 HINELKTLPKEIGELQNLTVL 323



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 138/258 (53%), Gaps = 25/258 (9%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP+ IG+L +L  LDL  N++  +P  IG L  L++L L  N++  L   IG L
Sbjct: 143 VNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYL 202

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDL GNQ++ LP  +  L  L EL L  N L +LP+ IG L +L+ L + +N L+
Sbjct: 203 KELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLK 262

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L+EL +  N+LK LP+ +G++  L VL +  N +K LP  +  L +L  
Sbjct: 263 TLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTV 322

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+  NE                         L+ LP+ IG L+ L  LD+ NN+++ LP
Sbjct: 323 LDLRNNE-------------------------LKTLPKEIGELQSLTVLDLRNNELKTLP 357

Query: 342 DSFRMLSRLRVLRVQENP 359
           +    L  LR L + + P
Sbjct: 358 NEIGKLKELRKLHLDDIP 375


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 171/299 (57%), Gaps = 9/299 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I  L++L  LDL +N+I  +P  I  L++L +LDL  N+I E+P +I +L 
Sbjct: 182 NQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLT 241

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L +L L  NQI+ +P A++ L  L +LDL  N ++ +P +I +L +L +L++  N + E
Sbjct: 242 NLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITE 301

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I   ++L +L +  N++  +PE +  +  L  L   YN I Q+   ++ L++L EL
Sbjct: 302 IPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTEL 361

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N++  +PE++   T L ++ +  N+  +  +  +I  L  L EL +  NQI  +P+
Sbjct: 362 HLSSNQITQIPEAIANLTNLTELYL--NYNKITQIAEAIAKLTNLTELHLDGNQITQIPE 419

Query: 343 SFRMLSRLRVLRVQENPLEVPPR---NIVEMGA-QAVVQYMADLVEKRDAKTQPVKQKK 397
           +   L +L  L ++ NPL + P    ++ E+G+ + +  Y+  L   R  + +P+ + K
Sbjct: 420 ALESLPKLEKLDLRGNPLPISPEILGSVYEVGSVEEIFNYLRLL---RSGEVRPLNEAK 475



 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 155/252 (61%), Gaps = 2/252 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P++I KL++L  LDLS+N+I  +P  I  L++L  L L +N+I E+P++I +L +L  LD
Sbjct: 142 PEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLD 201

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQI+ +P A++ L  L +LDLG N ++ +P +I +L +L  LI+ +N + E+P  I 
Sbjct: 202 LGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIA 261

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
             ++L +L + YN++  +P+A+  +  L  L +  N I ++P  +++L++L +LD+S N+
Sbjct: 262 NLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNK 321

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           +  +PE++   T L ++    N+  +  +  +I  L  L EL +S+NQI  +P++   L+
Sbjct: 322 ITEIPETIANLTNLTELYF--NYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLT 379

Query: 349 RLRVLRVQENPL 360
            L  L +  N +
Sbjct: 380 NLTELYLNYNKI 391



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 92/304 (30%), Positives = 171/304 (56%), Gaps = 14/304 (4%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  +P +I  L++L  LDL +N+I  +P  I  L++L  L L +N+I E+P++I 
Sbjct: 202 LGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIA 261

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           +L +L+ LDL  NQI+ +P A++ L  L +L L  N ++ +P++I +L +L +L +  N 
Sbjct: 262 NLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNK 321

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P TI   ++L EL  +YN++  + EA+ K+  L  L +  N I Q+P  +++L++L
Sbjct: 322 ITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNL 381

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            EL +++N++  + E++   T L ++++  N   +  +P ++ +L  LE+LD+  N + +
Sbjct: 382 TELYLNYNKITQIAEAIAKLTNLTELHLDGN--QITQIPEALESLPKLEKLDLRGNPLPI 439

Query: 340 LPDSF----------RMLSRLRVLRVQE-NPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
            P+             + + LR+LR  E  PL      ++  G+      +  L+  +  
Sbjct: 440 SPEILGSVYEVGSVEEIFNYLRLLRSGEVRPLNEAKLLLIGQGSVGKTSLIERLIHNKYD 499

Query: 389 KTQP 392
           K QP
Sbjct: 500 KNQP 503



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 154/266 (57%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P++I  L++L  L L  N+I   P  I  L++L +LDL  N+I E+P++I +L +L
Sbjct: 115 ITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNL 174

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +L L  NQI+ +P A++ L  L +LDLG N ++ +P +I +L +L +L +  N + E+P
Sbjct: 175 THLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIP 234

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I   ++L  L +  N++  +PEA+  +  L  L + YN I ++P  +++L++L +L +
Sbjct: 235 KAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVL 294

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N++  +PE++   T L ++++ +N   +  +P +I NL  L EL  + N+I  + ++ 
Sbjct: 295 SDNKITEIPEAIANLTNLTQLDLSDN--KITEIPETIANLTNLTELYFNYNKITQIAEAI 352

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L+ L  L +  N +   P  I  +
Sbjct: 353 AKLTNLTELHLSSNQITQIPEAIANL 378



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 149/256 (58%), Gaps = 2/256 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +PD + ++  L  L L    I  +P  I  L++L  L L +N+I E P++I  L +L
Sbjct: 92  LERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNL 151

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQI+ +P A++ L  L  L L SN ++ +P++I +L +L +L +  N + E+P
Sbjct: 152 TQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIP 211

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I   ++L +L +  N++  +P+A+  +  L  L +  N I ++P  +++L++L +LD+
Sbjct: 212 KAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDL 271

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S+N++  +P+++   T L ++ + +N   +  +P +I NL  L +LD+S+N+I  +P++ 
Sbjct: 272 SYNQITEIPKAIANLTNLTQLVLSDN--KITEIPEAIANLTNLTQLDLSDNKITEIPETI 329

Query: 345 RMLSRLRVLRVQENPL 360
             L+ L  L    N +
Sbjct: 330 ANLTNLTELYFNYNKI 345



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/329 (27%), Positives = 171/329 (51%), Gaps = 46/329 (13%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSL------------------DLS 124
           LIE ++ +G R+L+L  + +     LP  IGKL  L SL                   +S
Sbjct: 9   LIEQAATEGWRELDLSGQELTE---LPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVS 65

Query: 125 ENRIVAVPATIGGLSSLKKLDLHAN-----------------------RIIELPDSIGDL 161
            N +  +P  + GL +L+KLD+  N                        I E+P++I +L
Sbjct: 66  GNNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANL 125

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L +L L  NQI+  P A+++L  L +LDL  N ++ +P++I +L +L  LI+ +N + 
Sbjct: 126 TNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQIT 185

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E+P  I   ++L +L +  N++  +P+A+  +  L  L +  N I ++P  +++L++L  
Sbjct: 186 EIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTH 245

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N++  +PE++   T L+++++  N   +  +P++I NL  L +L +S+N+I  +P
Sbjct: 246 LILFSNQITEIPEAIANLTNLMQLDLSYN--QITEIPKAIANLTNLTQLVLSDNKITEIP 303

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++   L+ L  L + +N +   P  I  +
Sbjct: 304 EAIANLTNLTQLDLSDNKITEIPETIANL 332


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 165/263 (62%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I +L++L  L LS+N+I  +P  +  L++L +L L +N+I E+P+++ +L 
Sbjct: 251 NQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLT 310

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GNQI+ +P AL+ L  L  L L SN ++ +P+++ +L +L +L++ +N + E
Sbjct: 311 NLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAE 370

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P T+   ++L +L +  N++  +PE + K+  L  L +R+N I Q+P  +++L++L EL
Sbjct: 371 IPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTEL 430

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N++  +PE+L   T L ++   +N   +  +P +I  L  L +LD+S NQI  +P+
Sbjct: 431 HLSSNQITQIPEALANLTNLTQLYFSSN--QITQIPGAIAKLTNLTQLDLSGNQITEIPE 488

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
           +   LS+L  L ++ NPL + P 
Sbjct: 489 AIESLSKLEKLDLRGNPLPISPE 511



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/268 (30%), Positives = 155/268 (57%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I  L++L  L+LS N+I  +P  I  L++L  L L  N+I E+P++I  L 
Sbjct: 159 NKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLT 218

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+I+ +P A+++   L  LDL SN ++ +P++I  L +LK L +  N + E
Sbjct: 219 NLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITE 278

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +   ++L +L +  N++  +PEA+  +  L  L +  N I ++P  +++L +L  L
Sbjct: 279 IPEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRL 338

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N++  +PE+L   T L+++ + +N   +  +P ++ NL  L +L + +NQI  +P+
Sbjct: 339 YLYSNQITEIPEALANLTNLIQLVLFSN--QIAEIPETLANLTNLIQLVLFSNQIAEIPE 396

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +   L+ L  L ++ N +   P+ I  +
Sbjct: 397 TLAKLTNLTRLDLRFNQITQIPKVIANL 424



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 149/248 (60%), Gaps = 2/248 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I KLS+L  L  S+N+I  +P  I  L++L +L+L +N+I ++P+ I  L 
Sbjct: 136 NQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLT 195

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GNQI+ +P A+++L  L  LDL  N ++ +P++I    +L  L + +N + +
Sbjct: 196 NLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITK 255

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q ++L+ L +  N++  +PEA+  +  L  L +  N I ++P  +++L++L +L
Sbjct: 256 IPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTNLTQL 315

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N++  +PE+L     L ++ + +N   +  +P ++ NL  L +L + +NQI  +P+
Sbjct: 316 YLSGNQITEIPEALANLPNLTRLYLYSN--QITEIPEALANLTNLIQLVLFSNQIAEIPE 373

Query: 343 SFRMLSRL 350
           +   L+ L
Sbjct: 374 TLANLTNL 381



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 143/243 (58%), Gaps = 2/243 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD+I  L++L  L LS N+I  +P  I  LS+L  L    N+I ++P++I +L +L  L
Sbjct: 118 IPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRL 177

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQI+ +P  +++L  L  L L  N ++ +P++I  L +L  L +  N + E+P  I
Sbjct: 178 NLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAI 237

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q ++L  L +  N++  +PEA+ ++  L++L +  N I ++P  +++L++L +L +S N
Sbjct: 238 TQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSN 297

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  +PE+L   T L ++ +  N   +  +P ++ NL  L  L + +NQI  +P++   L
Sbjct: 298 QITEIPEALANLTNLTQLYLSGN--QITEIPEALANLPNLTRLYLYSNQITEIPEALANL 355

Query: 348 SRL 350
           + L
Sbjct: 356 TNL 358



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 84/289 (29%), Positives = 158/289 (54%), Gaps = 21/289 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+ I KL++L  L LS N+I  +P  I  L++L  LDL  N+I E+P++I    
Sbjct: 182 NQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQST 241

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  NQI+ +P A+++L  L+ L L  N ++ +P+++ +L +L +L + +N + E
Sbjct: 242 NLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITE 301

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +   ++L +L +  N++  +PEA+  +  L  L +  N I ++P  +++L++L +L
Sbjct: 302 IPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQL 361

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSI 321
            +  N++  +PE+L   T L+++ + +N                     F  +  +P+ I
Sbjct: 362 VLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVI 421

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NL  L EL +S+NQI  +P++   L+ L  L    N +   P  I ++
Sbjct: 422 ANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQIPGAIAKL 470



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/260 (30%), Positives = 147/260 (56%), Gaps = 3/260 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +PD + ++  L  L L    +  +P  I  L++L +L L  N+I ++P++I  L +L
Sbjct: 92  LESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNL 151

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L    N+I+ +P A++ L  L  L+L SN ++ +P+ I  L +L  L +  N + E+P
Sbjct: 152 TVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIP 211

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q ++L  L +  N++  +PEA+ +   L VL +  N I ++P  ++ L++L+ L +
Sbjct: 212 EAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYL 271

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N++  +PE+L   T L+++++ +N   +  +P ++ NL  L +L +S NQI  +P++ 
Sbjct: 272 SDNQITEIPEALANLTNLMQLHLSSN--QITEIPEALANLTNLTQLYLSGNQITEIPEAL 329

Query: 345 RMLSRLRVLRVQENPL-EVP 363
             L  L  L +  N + E+P
Sbjct: 330 ANLPNLTRLYLYSNQITEIP 349



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/258 (29%), Positives = 133/258 (51%), Gaps = 21/258 (8%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYL------------------DLRGNQISALPVALSR 183
           ++LDL    + ELP  IG L  L  L                   + GN +  LP+ L  
Sbjct: 19  RELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLKTLPLELLG 78

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L  L +LD+  N L S+PD +  ++ L++LI+   +L E+P  I   ++L +L + YN++
Sbjct: 79  LPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILSYNQI 138

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +PEA+ K+  L VL    N I Q+P  +++L++L  L++S N++  +PE +   T L 
Sbjct: 139 TQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLT 198

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            + +  N   +  +P +I  L  L  LD+S+N+I  +P++    + L VL +  N +   
Sbjct: 199 LLYLSGN--QITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKI 256

Query: 364 PRNIVEMGAQAVVQYMAD 381
           P  I ++    ++ Y++D
Sbjct: 257 PEAIAQLTNLKLL-YLSD 273



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 113/188 (60%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+++  L++L+ L L  N+I  +P T+  L++L +L L +N+I E+P+++  L 
Sbjct: 343 NQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLT 402

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDLR NQI+ +P  ++ L  L EL L SN ++ +P+++ +L +L +L   +N + +
Sbjct: 403 NLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLTQLYFSSNQITQ 462

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I + ++L +L +  N++  +PEA+  +  LE L +R N +   P  + S   +  +
Sbjct: 463 IPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPISPEILGSSDDVGSV 522

Query: 283 DVSFNELE 290
           +  FN L+
Sbjct: 523 EDIFNYLQ 530



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 61/194 (31%), Positives = 112/194 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+++  L +L  L L  N+I  +P  +  L++L +L L +N+I E+P+++ +L 
Sbjct: 320 NQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLT 379

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L+ L L  NQI+ +P  L++L  L  LDL  N ++ +P  I +L +L +L + +N + +
Sbjct: 380 NLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQ 439

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +   ++L +L    N++  +P A+ K+  L  L +  N I ++P  + SLS L +L
Sbjct: 440 IPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKL 499

Query: 283 DVSFNELESVPESL 296
           D+  N L   PE L
Sbjct: 500 DLRGNPLPISPEIL 513



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 32/250 (12%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD-LRGNQISALPV 179
           LDLS   +  +P  IG L  L+ L L   + +E  + +GD     +L+ + GN +  LP+
Sbjct: 21  LDLSGQELTELPVEIGKLQQLESLIL--GKKVEGYERVGDH----FLEKVSGNNLKTLPL 74

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            L  L  L +LD+  N L S+PD +  ++ L++LI+   +L E+P  I   ++L +L + 
Sbjct: 75  ELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLILS 134

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++  +PEA+ K+  L VL    N I Q+P  +++L++L  L++S N++  +PE +   
Sbjct: 135 YNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAKL 194

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           T L                           L +S NQI  +P++   L+ L +L + +N 
Sbjct: 195 TNLTL-------------------------LYLSGNQITEIPEAIAQLTNLTLLDLSDNK 229

Query: 360 LEVPPRNIVE 369
           +   P  I +
Sbjct: 230 ITEIPEAITQ 239



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 47/144 (32%), Positives = 86/144 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+++ KL++L  LDL  N+I  +P  I  L++L +L L +N+I ++P+++ +L 
Sbjct: 389 NQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLT 448

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L    NQI+ +P A+++L  L +LDL  N ++ +P++I SL  L+KL +  N L  
Sbjct: 449 NLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPI 508

Query: 223 LPHTIGQCSSLRELRVDYNRLKAL 246
            P  +G    +  +   +N L+ L
Sbjct: 509 SPEILGSSDDVGSVEDIFNYLQLL 532


>gi|356530354|ref|XP_003533747.1| PREDICTED: leucine-rich repeat protein lrrA-like [Glycine max]
          Length = 355

 Score =  162 bits (411), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/278 (38%), Positives = 156/278 (56%), Gaps = 6/278 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L  +DL    +  LP    DL ++  LDL  N +  +P +L+ RL+ +E LD+ SN L S
Sbjct: 36  LHVMDLSGMSLEFLPKPSLDLATICKLDLSNNNLQEIPESLTARLLNVEVLDVRSNQLKS 95

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N +E LP TI  C +L EL  ++N+L  LP+ +G ++  L+ 
Sbjct: 96  LPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFELVNLKK 155

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP++ S L++L+ LD   N L ++PE L     L  +N+  NF  L  LP
Sbjct: 156 LSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQYLDTLP 215

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD+S N I+ LP+S   L  L+ L V+ NPL  PP  +VE G   V++Y
Sbjct: 216 YSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLSVEGNPLTCPPMEVVEQGLHVVMEY 275

Query: 379 MADLVEKRDAKTQPVKQKKSWV-EMCFFSRSNKRKRNG 415
           M     K ++  Q   +K+ W+ ++      NK+ R G
Sbjct: 276 MH---HKMNSSDQNKTKKRWWIGKIVKCGTFNKQMRGG 310



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 105/165 (63%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP+SIG LS L  L++S N I ++P TI    +L++L+ + N++ +LPD+IG +L
Sbjct: 91  NQLKSLPNSIGCLSKLKVLNVSGNFIESLPKTIENCRALEELNANFNKLSKLPDTIGFEL 150

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           ++L  L +  N++  LP + S L  L+ LD   N L +LP+ + +LI+L+ L V  N   
Sbjct: 151 VNLKKLSVNSNKLVFLPSSTSHLTALKVLDARLNCLRALPEDLENLINLETLNVSQNFQY 210

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           L+ LP++IG   SL EL V YN +K LPE++G +  L+ LSV  N
Sbjct: 211 LDTLPYSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQKLSVEGN 255



 Score = 42.7 bits (99), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 2/74 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP+ +  L +L +L++S+N   +  +P +IG L SL +LD+  N I  LP+SIG L +L 
Sbjct: 189 LPEDLENLINLETLNVSQNFQYLDTLPYSIGLLLSLIELDVSYNNIKTLPESIGCLKNLQ 248

Query: 166 YLDLRGNQISALPV 179
            L + GN ++  P+
Sbjct: 249 KLSVEGNPLTCPPM 262


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/267 (40%), Positives = 152/267 (56%), Gaps = 9/267 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++I  L+ L  LDLS N++ A+PA I  LS L+ LDL AN+I ELP+ IG  + L  L
Sbjct: 194 LPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQEL 253

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  L  A+  L  L+ LDL  N LS LP SIG L  L+KL +E N L  LP +I
Sbjct: 254 SLSRNLLINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESI 313

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+   +  N+L  LPE++G +  L  L    N +  LP T+  L+ L +L++S N
Sbjct: 314 GGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGN 373

Query: 288 ELESVPES---LCFATT----LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +L ++PE    LC A +    L  +N+ +N   +  LP +IG L  L+EL +  N ++ L
Sbjct: 374 QLATLPEGLTVLCEALSSLLQLHYLNLSHN--QIAQLPEAIGALTQLKELVLVCNHLKDL 431

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P S   L++L+ L V  NPL   P  I
Sbjct: 432 PASIGSLTQLQFLYVSHNPLTHLPETI 458



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 148/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++I  L+ L  LDLS N   ++P  IG L+ L+ L LHAN++ +LP  IG L+ L  L
Sbjct: 102 LPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKEL 161

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N  + LPVA++ L +L+ LDL  N+ + LP++I  L  L KL +  N L  +P  I
Sbjct: 162 DLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVI 221

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              S L+ L +  N++  LPE +G    L+ LS+  N +  L   + SL++L+ LD+S N
Sbjct: 222 SSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQN 281

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+S+ + T L K+ I  N   L  LP SIG L  L+   +  NQ+ +LP+S   L
Sbjct: 282 QLSHLPKSIGYLTQLQKLYIERN--KLITLPESIGGLSNLQTFHLYRNQLTILPESIGDL 339

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +LR L   +N L   P  I
Sbjct: 340 IQLRELFAYQNQLTNLPGTI 359



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S+    RDL+L     +++  LP  I  L+ L  LDL EN++  +P  I  L+ LKKL
Sbjct: 59  EISALTQLRDLDL---FSNSLSALPLGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKL 115

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N    LP  IGDL  L  L L  N+++ LP  +  LV L+ELDL +N  + LP +I
Sbjct: 116 DLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSNNAFTDLPVAI 175

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +L  L+ L +  N   +LP  I   + L +L + YN+L A+P  +  +  L+ L +  N
Sbjct: 176 ANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCAN 235

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I +LP  + S   L+EL +S N L ++  ++   T L  +++  N   L  LP+SIG L
Sbjct: 236 QITELPELIGSCIELQELSLSRNLLINLSAAIGSLTNLKVLDLSQN--QLSHLPKSIGYL 293

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L++L I  N++  LP+S   LS L+   +  N L + P +I ++
Sbjct: 294 TQLQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDL 339



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 147/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +IG L+ L  LDLS N +  +P  I  L+ L+ LDL +N +  LP  I  L  L  L
Sbjct: 33  LPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQLEVL 92

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP A+S L +L++LDL +N+ +SLP  IG L  L+ L +  N L +LP  I
Sbjct: 93  DLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEI 152

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+EL +  N    LP A+  ++ L+ L +  N+   LP  ++ L+ L +LD+S+N
Sbjct: 153 GCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYN 212

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +   + L  +++  N   +  LP  IG+   L+EL +S N +  L  +   L
Sbjct: 213 KLTAIPAVISSLSQLQTLDLCAN--QITELPELIGSCIELQELSLSRNLLINLSAAIGSL 270

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + L+VL + +N L   P++I
Sbjct: 271 TNLKVLDLSQNQLSHLPKSI 290



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 144/250 (57%), Gaps = 10/250 (4%)

Query: 83  LIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL 141
           LI +S+  G+  +L + +   + +  LP SIG L+ L  L +  N+++ +P +IGGLS+L
Sbjct: 260 LINLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIERNKLITLPESIGGLSNL 319

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           +   L+ N++  LP+SIGDL+ L  L    NQ++ LP  +  L RLE+L+L  N L++LP
Sbjct: 320 QTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLP 379

Query: 202 D-------SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           +       ++ SL+ L  L +  N + +LP  IG  + L+EL +  N LK LP ++G + 
Sbjct: 380 EGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLT 439

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ L V +N +  LP T++ LS L++L++  N L  +P ++   T L ++ +  N    
Sbjct: 440 QLQFLYVSHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSEN--KF 497

Query: 315 RALPRSIGNL 324
             LP +IG L
Sbjct: 498 TVLPTAIGAL 507



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/215 (37%), Positives = 121/215 (56%), Gaps = 2/215 (0%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           +  +P TIG L+ L+KLDL  N +  LP+ I  L  L  LDL  N +SALP+ +  L +L
Sbjct: 30  LTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQL 89

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           E LDL  N L++LP++I  L  LKKL +  N    LP  IG  + L+ L +  N+L  LP
Sbjct: 90  EVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLP 149

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
             +G +  L+ L +  N    LP  +++L+ L+ LD+S N    +PE++     L K+++
Sbjct: 150 AEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDL 209

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
             N   L A+P  I +L  L+ LD+  NQI  LP+
Sbjct: 210 SYN--KLTAIPAVISSLSQLQTLDLCANQITELPE 242



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/215 (35%), Positives = 119/215 (55%), Gaps = 5/215 (2%)

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           + ELP +IG L  L  LDL  N ++ LP  +S L +L +LDL SN+LS+LP  I SL  L
Sbjct: 30  LTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQL 89

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           + L +  N L  LP  I   + L++L +  N   +LP  +G +  L+VL +  N + +LP
Sbjct: 90  EVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLP 149

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFADLRALPRSIGNLEMLEE 329
             +  L  L+ELD+S N    +P ++     L  +++  N+F D   LP +I  L  L +
Sbjct: 150 AEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTD---LPEAINGLAHLCK 206

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           LD+S N++  +P     LS+L+ L +  N + E+P
Sbjct: 207 LDLSYNKLTAIPAVISSLSQLQTLDLCANQITELP 241



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 104/182 (57%), Gaps = 7/182 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD------ 156
           + +  LP+SIG L  L  L   +N++  +P TI  L+ L+KL+L  N++  LP+      
Sbjct: 327 NQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLC 386

Query: 157 -SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
            ++  LL L YL+L  NQI+ LP A+  L +L+EL L  N+L  LP SIGSL  L+ L V
Sbjct: 387 EALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYV 446

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N L  LP TI   S L++L +++N L  LP A+  +  L+ L +  N    LPT + +
Sbjct: 447 SHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGA 506

Query: 276 LS 277
           L+
Sbjct: 507 LT 508



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 106/202 (52%), Gaps = 4/202 (1%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L LR   ++ LP  +  L +L++LDL +N L++LP+ I +L  L+ L + +N L  LP  
Sbjct: 23  LTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLG 82

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           I   + L  L +  N+L  LPEA+  +  L+ L +  N+   LP  +  L+ L+ L +  
Sbjct: 83  ICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHA 142

Query: 287 NELESVPESLCFATTLVKMNIGNN-FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           N+L  +P  +     L ++++ NN F D   LP +I NL  L+ LD+S N    LP++  
Sbjct: 143 NKLTKLPAEIGCLVHLKELDLSNNAFTD---LPVAIANLNQLQTLDLSRNHFTDLPEAIN 199

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L+ L  L +  N L   P  I
Sbjct: 200 GLAHLCKLDLSYNKLTAIPAVI 221



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 2/131 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L++R   + +LPTT+ +L+ L++LD+S N L ++PE +   T L  +++ +N   L ALP
Sbjct: 23  LTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSN--SLSALP 80

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
             I +L  LE LD+  NQ+  LP++   L++L+ L +  N     P  I ++    V+  
Sbjct: 81  LGICSLTQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGL 140

Query: 379 MADLVEKRDAK 389
            A+ + K  A+
Sbjct: 141 HANKLTKLPAE 151


>gi|432957990|ref|XP_004085962.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog, partial [Oryzias latipes]
          Length = 845

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/278 (36%), Positives = 155/278 (55%), Gaps = 2/278 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            +G+L +L  L +S N+I ++PA IG L +L++LD+  N +  LP S   L  L  LD  
Sbjct: 1   GLGQLRALKKLCVSHNKIQSLPAQIGALQALEELDISFNLLHGLPRSFSSLTRLRALDAD 60

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ+S  PV +  L +LEELDL  N   +LP +I  L S+K L + +  +  LP T  + 
Sbjct: 61  HNQLSQFPVEILALGQLEELDLSGNRFVALPANIWRLTSIKVLWLSSLRMASLPETFCRL 120

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L  L +D NRL ALP + G +  L+++++  N ++  P  +  +  L EL +S N L 
Sbjct: 121 QNLESLMLDGNRLSALPPSFGLLQRLKMMNLSSNQLQVFPQALLGVCGLEELYLSRNRLS 180

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            VPE +     LV + + NN   +  LP SI +LE LEEL +  N I VLPD+F  LSR+
Sbjct: 181 HVPEEISQLGRLVNLWLDNN--SITRLPDSIVDLENLEELVLQGNHIAVLPDNFGKLSRV 238

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
            + +V++NPL  PP  +   G   +  Y  +L + + A
Sbjct: 239 NIWKVKDNPLIQPPYEVCMKGIPYIALYQQELAQSQLA 276



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 100/190 (52%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I  L  L  LDLS NR VA+PA I  L+S+K L L + R+  LP++   L +L  L
Sbjct: 67  FPVEILALGQLEELDLSGNRFVALPANIWRLTSIKVLWLSSLRMASLPETFCRLQNLESL 126

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN++SALP +   L RL+ ++L SN L   P ++  +  L++L +  N L  +P  I
Sbjct: 127 MLDGNRLSALPPSFGLLQRLKMMNLSSNQLQVFPQALLGVCGLEELYLSRNRLSHVPEEI 186

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L  L +D N +  LP+++  +  LE L ++ N+I  LP     LS +    V  N
Sbjct: 187 SQLGRLVNLWLDNNSITRLPDSIVDLENLEELVLQGNHIAVLPDNFGKLSRVNIWKVKDN 246

Query: 288 ELESVPESLC 297
            L   P  +C
Sbjct: 247 PLIQPPYEVC 256



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 53/110 (48%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L + N   + ++  P ++  +  L  L LS NR+  VP  I  L  L  L L  N I  L
Sbjct: 146 LKMMNLSSNQLQVFPQALLGVCGLEELYLSRNRLSHVPEEISQLGRLVNLWLDNNSITRL 205

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           PDSI DL +L  L L+GN I+ LP    +L R+    +  N L   P  +
Sbjct: 206 PDSIVDLENLEELVLQGNHIAVLPDNFGKLSRVNIWKVKDNPLIQPPYEV 255


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/300 (34%), Positives = 165/300 (55%), Gaps = 10/300 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + RL  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------FADLRAL 317
            +K LP  +  L  L +L++  N++ ++P+     T   ++    N       +  L  L
Sbjct: 243 QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATL 302

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           PR IG L+ L+ LD+  NQ+  LP     L  L+ L +  N L + P+ I E+    ++Q
Sbjct: 303 PREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQ 362



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 11/259 (4%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L++LDL  N++   P  I +L  L  LDL  N++  LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L+EL L  N L + P  IG L +L+ L ++ N L  LP  IG+  +L +L +  
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRK 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  LP+ +G++  L+ L+++ N +  LP  +  L +L+ L +S N+L + P+ +    
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM---------LSRLR 351
            L ++++  N   L+ LP+ IG L+ LE+L++  NQI  LP   ++         L  L+
Sbjct: 233 NLQELDLNGN--QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQ 290

Query: 352 VLRVQENPLEVPPRNIVEM 370
           +L +  N L   PR I ++
Sbjct: 291 ILSLSYNRLATLPREIGQL 309



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 242 NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 301

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 362 QLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 422 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 456

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 457 NNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I +L +L SL L +  +VA+P  I  L  L+ L L  N++  LP  IG L +L  LD
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 658 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYEN 717



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 50/313 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 362 QLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 422 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 481

Query: 288 -------------------ELESVPE-------SLCFATTLVKMNIGNNFA--------- 312
                              +L  V E       +L     L  +++   +          
Sbjct: 482 PLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSLSLEYQQFSLFPKEI 541

Query: 313 ----DLRAL----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV-QE 357
               +LR+L          P+ I  L+ LE L +  NQ++ LP    +L  LR L +   
Sbjct: 542 LRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGAN 601

Query: 358 NPLEVPPRNIVEM 370
           N  EV P+ I  +
Sbjct: 602 NEFEVLPKEIARL 614



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 137/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 414 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 473

Query: 165 VYLDL----------------------------RGNQISALPVALSRLVRLEELDLGSNN 196
             L+L                             G     L +AL + +++  L L    
Sbjct: 474 EVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGGTYRNLNLALEQPLKILSLSLEYQQ 533

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 534 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 593

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 651

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N +++ P  I  +
Sbjct: 652 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARL 706



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 103/214 (48%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 658 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 692

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I++LP+    L  LR L + ENP  +PP+ +
Sbjct: 693 YNRIKMLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L   +    P  I  L +L+ L L+   ++ LP  I  L  L +L L  NQ+ +
Sbjct: 523 KILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKS 582

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 583 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 642

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++ +PE 
Sbjct: 643 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEE 702

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 703 IARLQNLRKLTLYEN 717



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 64/116 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 602 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 661

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N +  LP+ I  L +L+KL +  N
Sbjct: 662 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKMLPEEIARLQNLRKLTLYEN 717


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  162 bits (410), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 160/264 (60%), Gaps = 3/264 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ ++ LP  I +L+SL SL+L  N+I  +P  IG L+SL+ LDL  N+I ELP  IG L
Sbjct: 85  LNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQL 144

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLG-SNNLSSLPDSIGSLISLKKLIVETNDL 220
            SL  L+L GN I  LP  + +L  L+ LDL   NN+  LP  I  L SL+ L +  N +
Sbjct: 145 TSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKI 204

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           +ELP  I Q +SL+ L + +N+++ LP  + ++ +L+ L + +N I++LP  +  L+SL+
Sbjct: 205 QELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQ 264

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            L++  N ++ +P  +   T+L  +N+G N  +++ LP  I  L  L+ L++ +N I+ L
Sbjct: 265 SLNLYSNNIQELPPEILQLTSLQSLNLGGN--NIQELPPEILQLTSLQSLNLRSNNIQEL 322

Query: 341 PDSFRMLSRLRVLRVQENPLEVPP 364
           P   R L  L+ L ++ NPL +PP
Sbjct: 323 PPEIRQLPNLKKLDLRSNPLPIPP 346



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 146/255 (57%), Gaps = 12/255 (4%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             LDLS N +  +P  IG L+ LKKL L   +     D  GD+   +     GN++SALP
Sbjct: 19  TELDLSGNDLTVLPPDIGKLTHLKKLILGKYQY----DDEGDIAGFI-----GNKLSALP 69

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +LEEL +  N L  LP  I  L SL+ L +  N ++ELP  IGQ +SL+ L +
Sbjct: 70  REIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDL 129

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS-FNELESVPESLC 297
            YN+++ LP  +G++ +L+ L++  NNI++LP  +  L++L+ LD+S FN ++ +P  + 
Sbjct: 130 RYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIF 189

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
             T+L  +++   F  ++ LP  I  L  L+ L +S N+I+ LP     L+ L+ L +  
Sbjct: 190 QLTSLQSLHLS--FNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSF 247

Query: 358 NPLEVPPRNIVEMGA 372
           N ++  P  I+++ +
Sbjct: 248 NKIQELPAEILQLTS 262



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 117/195 (60%), Gaps = 1/195 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSE-NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +NI+ LP  IG+L++L SLDLS  N I  +P  I  L+SL+ L L  N+I ELP  I  L
Sbjct: 155 NNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQL 214

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L L  N+I  LP  + +L  L+ L L  N +  LP  I  L SL+ L + +N+++
Sbjct: 215 TSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQ 274

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP  I Q +SL+ L +  N ++ LP  + ++ +L+ L++R NNI++LP  +  L +L++
Sbjct: 275 ELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKK 334

Query: 282 LDVSFNELESVPESL 296
           LD+  N L   PE L
Sbjct: 335 LDLRSNPLPIPPEIL 349



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 130/229 (56%), Gaps = 3/229 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL-HANRIIELPDSIGD 160
            + I+ LP  IG+L+SL SL+LS N I  +P  IG L++L+ LDL   N I ELP  I  
Sbjct: 131 YNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQ 190

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L SL  L L  N+I  LP  + +L  L+ L L  N +  LP  I  L SL+ L +  N +
Sbjct: 191 LTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKI 250

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           +ELP  I Q +SL+ L +  N ++ LP  + ++ +L+ L++  NNI++LP  +  L+SL+
Sbjct: 251 QELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQ 310

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
            L++  N ++ +P  +     L K+++ +N   L   P  +G+ E  E+
Sbjct: 311 SLNLRSNNIQELPPEIRQLPNLKKLDLRSN--PLPIPPEILGSKEWYED 357



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 101/175 (57%)

Query: 101 LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
             +NI+ LP  I +L+SL SL LS N+I  +PA I  L+SL+ L L  N+I ELP  I  
Sbjct: 177 FFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQ 236

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L SL  L L  N+I  LP  + +L  L+ L+L SNN+  LP  I  L SL+ L +  N++
Sbjct: 237 LTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNI 296

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           +ELP  I Q +SL+ L +  N ++ LP  + ++  L+ L +R N +   P  + S
Sbjct: 297 QELPPEILQLTSLQSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPIPPEILGS 351


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  162 bits (409), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/324 (33%), Positives = 176/324 (54%), Gaps = 11/324 (3%)

Query: 51  SIIFRNK--VPIMIMCMCC--VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIE 106
           SI F+ +  +P++++C  C    Q  E      L   ++     G  DL+  +KL+    
Sbjct: 7   SIRFKKRFTIPLIMICFFCELQAQTNEGQIYRNLTEALKNPMDVGVLDLS--SKLLTTF- 63

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
             P  I K  +L  LDLS N++ A+P  IG L +L+KL++  N +IELP  IG L +L  
Sbjct: 64  --PKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQEIGQLQNLEQ 121

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L+L GN+++ LP  + +L +LE L +  N L+ LP  IG L +L++LI+  N L  LP  
Sbjct: 122 LNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEE 181

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IGQ     +L +  N+L  LP+ + K+  LE + +  N +  LP  +  L  L  L +  
Sbjct: 182 IGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYS 241

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           NEL ++PE +     L ++++  N  +L  LP+ IG L+ L+ LD+S+NQ+ ++P     
Sbjct: 242 NELTTLPEEIGQLQNLRQLSLKLN--NLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQ 299

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           L  L++L +  N L   P+ I ++
Sbjct: 300 LQNLKLLDLSGNSLTTLPKEIGQL 323



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/278 (34%), Positives = 153/278 (55%), Gaps = 3/278 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP  IG+L +L  L+LS NR+  +P  IG L  L+ L ++ NR+  LP  IG L
Sbjct: 103 VNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQL 162

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L GN +++LP  + +L + E+L L  N L++LP  +  L +L+++ +  N L 
Sbjct: 163 QNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLT 222

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +  N L  LPE +G++  L  LS++ NN+  LP  +  L +L  
Sbjct: 223 SLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLTTLPKEIGQLQNLDN 282

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+S N+L  +P+ +     L  +++  N   L  LP+ IG L+ L+ LD+S N +  LP
Sbjct: 283 LDLSDNQLTLIPKEIGQLQNLKLLDLSGN--SLTTLPKEIGQLQNLKLLDLSGNSLTTLP 340

Query: 342 DSFRMLSRLRVLRVQENP-LEVPPRNIVEMGAQAVVQY 378
                L  L  L ++  P L +   NI ++   A++ +
Sbjct: 341 KEIGQLKNLYFLAMKGIPDLILQKENIRKLIPNAILNF 378


>gi|426256334|ref|XP_004021795.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Ovis aries]
          Length = 1029

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/289 (37%), Positives = 166/289 (57%), Gaps = 7/289 (2%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+++G L  L  L+LS N++  +PA +G L  L++LD+  NR+  LPDS+  L  L  LD
Sbjct: 126 PEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSRLRTLD 185

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           +  NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    
Sbjct: 186 VDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFC 245

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           + +SL  L +D N L+ALP    ++  L++L++  N +++ P  +  L+ L EL +S N+
Sbjct: 246 ELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQ 305

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LS
Sbjct: 306 LTSVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLS 363

Query: 349 RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           R+ + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 364 RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 407



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 153/322 (47%), Gaps = 37/322 (11%)

Query: 93  RDLNLQ-NKLMDNIEWLP-DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           RD  L+  KL  N+  L   S G       LD  +   + +PA IG    ++ L+L  N 
Sbjct: 16  RDAALRARKLRSNLRQLTLSSAGGCPGTDQLDSPDAPQLVLPANIG---DIEVLNLGNNG 72

Query: 151 IIELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSL-PDSIGSL 207
           + E+PD +G  L SL  L LR N+ + LP A++ L   L ELD+  N LS L P+++G+L
Sbjct: 73  LEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRLSVLGPEAVGAL 132

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
                                    LR+L + +N+L  LP  +G +  LE L V +N + 
Sbjct: 133 -----------------------RELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLA 169

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP +++ LS LR LDV  N+L + P  L     L ++++ +N   LR LP  I  L  L
Sbjct: 170 HLPDSLAGLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVSSN--RLRGLPEDISALRAL 227

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
           + L +S  ++  LP  F  L+ L  L +  N L   P     +    ++   ++L+E+  
Sbjct: 228 KILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFP 287

Query: 388 AKTQPVKQKKSWVEMCFFSRSN 409
           A   P+    + +E  + SR+ 
Sbjct: 288 AALLPL----AGLEELYLSRNQ 305


>gi|449465350|ref|XP_004150391.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Cucumis
           sativus]
          Length = 362

 Score =  162 bits (409), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/262 (41%), Positives = 151/262 (57%), Gaps = 5/262 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L ++  LDL  N + ++P +L +RL+ +  LD+ SN L  
Sbjct: 42  LEIVDLSGISLNSLPNPNLNLTTICKLDLSNNNLQSIPESLIARLLNVVVLDVHSNQLKC 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP SIG L  LK L V  N +  LP T+  C SL EL V++N+L  LP+A+G ++  L+ 
Sbjct: 102 LPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEELNVNFNKLMKLPDALGFELTNLKK 161

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP ++S L++LR LD   N L S+P+ L     L  +N+  NF  L+ LP
Sbjct: 162 LSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPDDLENLIKLEVLNVSQNFHHLQTLP 221

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELDIS N I  LP+S   L RL  L V  NPL  PP  + E G  AV +Y
Sbjct: 222 YSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLCVDGNPLSSPPSLVFEQGLHAVKEY 281

Query: 379 MADLVEKRDAKTQPVKQKKSWV 400
           ++   EK +A  Q   +KKSWV
Sbjct: 282 LS---EKMNAGHQNSHKKKSWV 300



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 105/172 (61%), Gaps = 3/172 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP SIG L  L +L++S N I ++P T+    SL++L+++ N++++LPD++G +L
Sbjct: 97  NQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLVDCRSLEELNVNFNKLMKLPDALGFEL 156

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N++  LP ++S L  L  LD   N L+SLPD + +LI L+ L V  N   
Sbjct: 157 TNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLNCLTSLPDDLENLIKLEVLNVSQNFHH 216

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           L+ LP++IG   SL EL + YN +  LPE++G +  L  L V  N +   P+
Sbjct: 217 LQTLPYSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLCVDGNPLSSPPS 268



 Score = 39.7 bits (91), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 29/48 (60%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
             +++ LP SIG L SLV LD+S N I  +P +IG L  L KL +  N
Sbjct: 214 FHHLQTLPYSIGLLLSLVELDISYNGITTLPESIGCLKRLHKLCVDGN 261


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  161 bits (408), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 148/261 (56%), Gaps = 2/261 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I  L  L  L LS +++   P  IG L SLK+L L +N+++ L   IG L SL  L
Sbjct: 168 LPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERL 227

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  LEEL+L +N L +LP  IG+L +L+ L + +N    LP  I
Sbjct: 228 ILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQI 287

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L++L + +N+L  LP+ +GK+  LE L +  N +  LP  +  L  L+ LD++ N
Sbjct: 288 WQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANN 347

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +PE +     L  +++ NN   LR LP+ IG LE L+ LD+SNNQ+  LP     L
Sbjct: 348 QLRLLPEEIGKLEKLKYLDLSNN--QLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKL 405

Query: 348 SRLRVLRVQENPLEVPPRNIV 368
            +L  L +  NP    P+ IV
Sbjct: 406 EKLEDLDLSGNPFTTFPKEIV 426



 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 152/272 (55%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L +L  L+L  N++  +P  IG L +L+ L+LH NR+  LP  IG L  L  L
Sbjct: 99  LPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRL 158

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+  LP  +  L  LEEL L  + L + P+ IG L SLK+LI+++N L  L   I
Sbjct: 159 YLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEI 218

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SL  L ++ N+L  LP  +GK+  LE L++  N +  LP  + +L +L+ L +  N
Sbjct: 219 GKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN 278

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  ++P+ +     L  +++ +N   L  LP+ IG LE LE+L + +NQ+  LP     L
Sbjct: 279 QFRTLPKQIWQLQNLQDLHLAHN--QLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKL 336

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +L+ L +  N L + P    E+G    ++Y+
Sbjct: 337 EKLKYLDLANNQLRLLPE---EIGKLEKLKYL 365



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  L   +G L +L  L+L  N++  +P  IG L +L+ L L+ NR+  LP  +G L 
Sbjct: 48  DQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQ 107

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP  + +L  L+ L+L +N L SLP  IG L  LK+L +  N L  
Sbjct: 108 NLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRT 167

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L EL +  ++LK  PE +GK+ +L+ L +  N +  L   +  L SL  L
Sbjct: 168 LPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERL 227

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P  +     L ++N+ NN   L  LP+ IG LE L+ L + +NQ R LP 
Sbjct: 228 ILENNQLATLPNEIGKLQNLEELNLSNN--QLVTLPQEIGALENLQNLHLYSNQFRTLPK 285

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L +  N L V P+ I
Sbjct: 286 QIWQLQNLQDLHLAHNQLTVLPQEI 310



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 139/251 (55%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           SL L+ +++  +   +G L +L++L+L  N++  LP+ IG L +L  L L  N++  LP 
Sbjct: 42  SLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQ 101

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            +  L  L EL+L +N L++LP+ IG L +L+ L +  N L+ LP  IG+   L+ L + 
Sbjct: 102 EVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLG 161

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L+ LP+ +  +  LE L +  + +K  P  +  L SL+ L +  N+L  + + +   
Sbjct: 162 GNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKL 221

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            +L ++ + NN   L  LP  IG L+ LEEL++SNNQ+  LP     L  L+ L +  N 
Sbjct: 222 RSLERLILENN--QLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQ 279

Query: 360 LEVPPRNIVEM 370
               P+ I ++
Sbjct: 280 FRTLPKQIWQL 290


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 113/348 (32%), Positives = 181/348 (52%), Gaps = 37/348 (10%)

Query: 48  QLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLM 102
           ++G +I    +  +++C CC  +  EK     L   ++  +       G R+    N   
Sbjct: 103 KIGGVI----LSTILLCFCCTIEAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSN--- 155

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           D +  LP  IGKL +L  LDLS N+++ +P  IG L +L+KL+L  NR+  LP+ IG   
Sbjct: 156 DPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQ 215

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L +L L  NQ++ LP  + +L +LE L L +N L++
Sbjct: 216 NLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTT 275

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG L +L+ L +  N L  LP  IG+   L+EL ++ N+L  LP+ +GK+  L+ L
Sbjct: 276 LPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQEL 335

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            + YN +  LP  +  L  L++L  S N+  +VPE +     L  +N+ +N   L +LP+
Sbjct: 336 RLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSN--QLTSLPK 393

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            IGNL+ L+ L +S+NQ+  LP     L  L++L + +N L   P+ I
Sbjct: 394 EIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTTLPKEI 441



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 144/274 (52%), Gaps = 12/274 (4%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N++WL          P  IGKL  L +L L  N++  +P  IG L +L+ L L  N++
Sbjct: 237 LQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQL 296

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L  L  L L  NQ++ LP  + +L  L+EL L  N L++LP+ I  L  LK
Sbjct: 297 TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLK 356

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           KL    N    +P  I    +L+ L +  N+L +LP+ +G +  L++L +  N +  LP 
Sbjct: 357 KLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPK 416

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ L +S N+L ++P+ +     L ++ + +N   L  LP+ I NL+ LE L 
Sbjct: 417 EIGKLQNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDN--QLTTLPKEIENLQSLEYLY 474

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           +S+N +   P+    L  L+  R++  P  +P +
Sbjct: 475 LSDNPLTSFPEEIGKLQHLKWFRLENIPTLLPQK 508



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 104/195 (53%), Gaps = 2/195 (1%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  + +L  L +LDL SN L +LP  IG L +L+KL +  N L  LP  IG+  +L+E
Sbjct: 160 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 219

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L  LP+ + K+  L+ L +  N +  LP  +  L  L  L +  N+L ++P+ 
Sbjct: 220 LHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 279

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L  + + NN   L  LP+ IG L+ L+EL + NNQ+  LP     L  L+ LR+
Sbjct: 280 IGKLQNLQWLGLSNN--QLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRL 337

Query: 356 QENPLEVPPRNIVEM 370
             N L   P  I ++
Sbjct: 338 DYNRLTTLPEEIEKL 352


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/266 (36%), Positives = 150/266 (56%), Gaps = 2/266 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  LP+ IGKL SL  L+LS N++  +P  I  L  L+ L L  N++  LP  IG L
Sbjct: 92  FNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKL 151

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  NQ++ +P  +  L  L+EL L  NNL++LP  +G L +L+KLI++ N L 
Sbjct: 152 QNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLT 211

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +LR L +  N+   LP+ +G +  L+ L++  N +  LP  + +L  L+E
Sbjct: 212 TLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQE 271

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N+L ++P+ +     L  +N+ +N   L  +P+ IGNL+ LE L++S+NQ+  LP
Sbjct: 272 LRLDHNQLTTLPKEIGNLQNLKDLNLRSN--QLTTIPQEIGNLQNLEYLNLSSNQLTALP 329

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNI 367
                L  L  L +  NPL   P  I
Sbjct: 330 KEIENLQSLESLDLSGNPLTSFPEEI 355



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 152/272 (55%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L +L  L+L EN++  +P  IG L  L+KLDL  N+I  LP+ IG L SL  L
Sbjct: 52  LPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQEL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ +P  +  L  L+ L L  N L++LP  IG L +L++L +  N L  +P  I
Sbjct: 112 NLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL + +N L  LP+ VG++  L+ L +  N +  LP  +  L +LR L ++ N
Sbjct: 172 GNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  ++P+ +     L  + +  N   L  LP+ IGNL+ L+EL + +NQ+  LP     L
Sbjct: 232 QFTTLPKEIGNLQNLQGLALTRN--QLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNL 289

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L+ L ++ N L   P+   E+G    ++Y+
Sbjct: 290 QNLKDLNLRSNQLTTIPQ---EIGNLQNLEYL 318



 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 163/284 (57%), Gaps = 7/284 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+ + +  ++LNL +N+L      +P  IG L  L  LDL  N+I  +P  IG L SL++
Sbjct: 55  EIGNLQNLQELNLWENQLTT----IPQEIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQE 110

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N++  +P  I +L  L  L L  NQ++ LP  + +L  L+EL L  N L+++P  
Sbjct: 111 LNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWENQLTTIPQE 170

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L +LK+L +  N+L  LP  +GQ  +L++L +D N+L  LP+ +GK+  L  L++  
Sbjct: 171 IGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTG 230

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N    LP  + +L +L+ L ++ N+L ++P+ +     L ++ + +N   L  LP+ IGN
Sbjct: 231 NQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHN--QLTTLPKEIGN 288

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L++L++ +NQ+  +P     L  L  L +  N L   P+ I
Sbjct: 289 LQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEI 332



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 136/258 (52%), Gaps = 25/258 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L EN++  +P  IG L +LK+L L  N +  LP  +G L +L  L
Sbjct: 144 LPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKL 203

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L  L L  N  ++LP  IG+L +L+ L +  N L  LP  I
Sbjct: 204 ILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEI 263

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ELR+D+N+L  LP+ +G +  L+ L++R N +  +P  + +L +L  L++S N
Sbjct: 264 GNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSN 323

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +                         L ALP+ I NL+ LE LD+S N +   P+    L
Sbjct: 324 Q-------------------------LTALPKEIENLQSLESLDLSGNPLTSFPEEIGKL 358

Query: 348 SRLRVLRVQENPLEVPPR 365
             L+ LR++  P  +P +
Sbjct: 359 QHLKRLRLENIPTLLPQK 376



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 143/248 (57%), Gaps = 4/248 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  +++A+P  IG L +L++L+L  N++  +P  IG+L  L  LDL  N+I+ LP  
Sbjct: 42  LYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLDLGFNKITVLPNE 101

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL+L  N L+++P  I  L  L+ L +  N L  LP  IG+  +L+EL +  
Sbjct: 102 IGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKEIGKLQNLQELHLWE 161

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  +P+ +G +  L+ L + +NN+  LP  +  L +L++L +  N+L ++P+ +    
Sbjct: 162 NQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQ 221

Query: 301 TLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            L  + + GN F     LP+ IGNL+ L+ L ++ NQ+  LP     L +L+ LR+  N 
Sbjct: 222 NLRGLALTGNQFT---TLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQ 278

Query: 360 LEVPPRNI 367
           L   P+ I
Sbjct: 279 LTTLPKEI 286



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 107/193 (55%), Gaps = 5/193 (2%)

Query: 101 LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
           + +N+  LP  +G+L +L  L L +N++  +P  IG L +L+ L L  N+   LP  IG+
Sbjct: 183 MHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGN 242

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L +L  L L  NQ++ LP  +  L +L+EL L  N L++LP  IG+L +LK L + +N L
Sbjct: 243 LQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQL 302

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
             +P  IG   +L  L +  N+L ALP+ +  + +LE L +  N +   P  +  L  L+
Sbjct: 303 TTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFPEEIGKLQHLK 362

Query: 281 ELDVSFNELESVP 293
            L      LE++P
Sbjct: 363 RL-----RLENIP 370



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 108/202 (53%), Gaps = 2/202 (0%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +  L     S L  AL    ++  L L +  L +LP  IG+L +L++L +  N L  +P 
Sbjct: 18  FYKLDAEDYSKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQ 77

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG    L++L + +N++  LP  +GK+ +L+ L++ +N +  +P  +  L  L+ L + 
Sbjct: 78  EIGNLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLV 137

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           +N+L ++P+ +     L ++++  N   L  +P+ IGNL+ L+EL + +N +  LP    
Sbjct: 138 YNQLTTLPKEIGKLQNLQELHLWEN--QLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVG 195

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L  L+ L + +N L   P+ I
Sbjct: 196 QLQNLQKLILDKNQLTTLPQEI 217



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 96/179 (53%), Gaps = 2/179 (1%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L + + S L +++ +   ++ L +    L  LP  IG   +L+EL +  N+L  +P+ +G
Sbjct: 21  LDAEDYSKLNEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIG 80

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            +  L+ L + +N I  LP  +  L SL+EL++SFN+L ++P+ +     L  +++   +
Sbjct: 81  NLQHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLV--Y 138

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  LP+ IG L+ L+EL +  NQ+  +P     L  L+ L +  N L   P+ + ++
Sbjct: 139 NQLTTLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQL 197


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/317 (33%), Positives = 172/317 (54%), Gaps = 14/317 (4%)

Query: 48  QLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKK-----GTRDLNLQNKLM 102
           ++G +I    +  +++C CC  +  EK     L   ++  +       G R+    N   
Sbjct: 70  KIGGVI----LSTILLCFCCTIEAKEKGVYYNLTEALQHPTDVQYLYLGPRERKNSN--- 122

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  LP  IGKL +L  LDLS N+++ +P  IG L +L+KLDL  N++  LP  IG L 
Sbjct: 123 DPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQ 182

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ L   +  L  L+ LDLG N L++LP+ I +L +L+ L +  N L  
Sbjct: 183 NLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTT 242

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    +L+ L +  N+L  LPE +G +  L+ L +  N +  LP  + +L +L++L
Sbjct: 243 LPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKL 302

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L ++P+ +     L K+ + NN   L  LP  IGNL+ L+ L + +NQ+  LP 
Sbjct: 303 DLEGNQLTTLPKEIGKLQKLKKLYLYNN--RLTTLPIEIGNLQKLQTLSLGHNQLTTLPK 360

Query: 343 SFRMLSRLRVLRVQENP 359
               L +L++L +  NP
Sbjct: 361 EIGNLQKLKMLDLGGNP 377



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 108/192 (56%), Gaps = 2/192 (1%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  + +L  L +LDL SN L +LP  IG L +L+KL +  N L  LP  IGQ  +L++
Sbjct: 127 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQK 186

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L ++ N+L  L + +G +  L+ L +  N +  LP  + +L +L+ LD+  N+L ++PE 
Sbjct: 187 LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEE 246

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L  +++G N   L  LP  IGNL+ L+ LD+  NQ+  LP+    L  L+ L +
Sbjct: 247 IWNLQNLQTLDLGRN--QLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQKLDL 304

Query: 356 QENPLEVPPRNI 367
           + N L   P+ I
Sbjct: 305 EGNQLTTLPKEI 316



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 9/96 (9%)

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIG-----NNFADLRALPRSIGNLEMLEELDISN 334
           +E  V +N    + E+L   T +  + +G     N+   L  LP+ IG L+ L +LD+S+
Sbjct: 90  KEKGVYYN----LTEALQHPTDVQYLYLGPRERKNSNDPLWTLPKEIGKLQNLRDLDLSS 145

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NQ+  LP     L  L+ L +  N L   P+ I ++
Sbjct: 146 NQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQL 181


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  161 bits (408), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IGKL++L++L LS N++  VP  IG L++L +L LH NR+ E+P+ IG L SL  L
Sbjct: 58  VPKEIGKLTNLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTEL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ +P  + +L+ L EL L  N L  +P  +  LISL KL +  N L E P  +
Sbjct: 118 SLFQNQLTEVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKEL 177

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL +  N+L  +P+  G++ +L  L++  N +  +P  +  L SL EL +S N
Sbjct: 178 GKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQN 237

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VP+ L   T L  ++I  N   L  +P  IG L  L EL +S+NQ++ +P     L
Sbjct: 238 KLMEVPKELGKLTNLTWLHIDQN--QLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQL 295

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           +RL    + +N L   P+ I
Sbjct: 296 ARLTRFSLSQNQLIEIPKEI 315



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 152/274 (55%), Gaps = 6/274 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L +    +P   G+L+SL+ L+LS+NR+  VP  +G L SL +L L  N+++E+P  
Sbjct: 190 QNQLTE----VPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKE 245

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G L +L +L +  NQ++ +P  + +L +L EL L  N L  +P  +G L  L +  +  
Sbjct: 246 LGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQ 305

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L E+P  IG+ + L  LR+D N+L  +P  + ++  L  L +  N + ++P  +  ++
Sbjct: 306 NQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVT 365

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L EL +S N+L  VP+ L     LV++ +  N   L  +P+ +G L  L  L +S N++
Sbjct: 366 KLTELSLSQNQLIEVPKELGQLINLVELRLNQN--QLTKVPKELGKLTNLTRLHLSYNKL 423

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
             +P     L+ LR L + +N L   P+ + ++ 
Sbjct: 424 IEVPKELGKLASLRELDLDQNQLTKVPKELGKLA 457



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 139/246 (56%), Gaps = 20/246 (8%)

Query: 85  EVSSKKGTRDLNL-QNKLMD---------NIEWL----------PDSIGKLSSLVSLDLS 124
           E+   K   +L+L QNKLM+         N+ WL          P+ IG+L+ L  L LS
Sbjct: 222 ELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLS 281

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  VP  +G L+ L +  L  N++IE+P  IG +  L++L +  NQ++ +P  LS+L
Sbjct: 282 HNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQL 341

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           V L  L L  N L+ +P  +G +  L +L +  N L E+P  +GQ  +L ELR++ N+L 
Sbjct: 342 VNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLT 401

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            +P+ +GK+  L  L + YN + ++P  +  L+SLRELD+  N+L  VP+ L     LV 
Sbjct: 402 KVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASLRELDLDQNQLTKVPKELGKLAKLVI 461

Query: 305 MNIGNN 310
           +++ NN
Sbjct: 462 LDLSNN 467



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDL   ++  VP  IG L++L  L L  N++ E+P  IG L +L+ L L GNQ++ +P 
Sbjct: 24  TLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTNLIALSLSGNQLTEVPK 83

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L +L L  N L+ +P+ IG L SL +L +  N L E+P  IGQ  +L EL + 
Sbjct: 84  EIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTELYLS 143

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L  +P+ + ++ +L  L +  N + + P  +  L +L EL +S N+L  VP+     
Sbjct: 144 QNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQL 203

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           T+L+K+N+  N   L  +P+ +G L+ L EL +S N++  +P     L+ L  L + +N 
Sbjct: 204 TSLIKLNLSQN--RLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQ 261

Query: 360 LEVPPRNIVEM 370
           L   P  I ++
Sbjct: 262 LTEIPEEIGQL 272



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 162/298 (54%), Gaps = 20/298 (6%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +LASL E+S          QN+L +    +P  IG+L +L  L LS+N+++ +P  +  L
Sbjct: 110 QLASLTELSL--------FQNQLTE----VPKEIGQLINLTELYLSQNQLMKIPKDLERL 157

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            SL KL L  N++ E P  +G L++L+ L L  NQ++ +P    +L  L +L+L  N L+
Sbjct: 158 ISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLT 217

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +P  +G L SL +L +  N L E+P  +G+ ++L  L +D N+L  +PE +G++  L  
Sbjct: 218 GVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTE 277

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+ +N +K++P  +  L+ L    +S N+L  +P+ +     L+ + I  N   L  +P
Sbjct: 278 LSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQN--QLTEVP 335

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR-----NIVEM 370
           R +  L  L  L +  NQ+  +P     +++L  L + +N L EVP       N+VE+
Sbjct: 336 RELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVEL 393



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 146/267 (54%), Gaps = 7/267 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L +     P  +GKL +L+ L LS+N++  VP   G L+SL KL+L  NR+  +P  
Sbjct: 167 QNQLTE----APKELGKLINLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQE 222

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G+L SL  L L  N++  +P  L +L  L  L +  N L+ +P+ IG L  L +L +  
Sbjct: 223 LGELKSLTELHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSH 282

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L+E+P  +GQ + L    +  N+L  +P+ +GKI  L  L +  N + ++P  +S L 
Sbjct: 283 NQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLV 342

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  L +  N+L  +P+ L   T L ++++  N   L  +P+ +G L  L EL ++ NQ+
Sbjct: 343 NLTRLHLHQNQLTKIPKELGKVTKLTELSLSQN--QLIEVPKELGQLINLVELRLNQNQL 400

Query: 338 RVLPDSFRMLSRLRVLRVQENPL-EVP 363
             +P     L+ L  L +  N L EVP
Sbjct: 401 TKVPKELGKLTNLTRLHLSYNKLIEVP 427



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 25/221 (11%)

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS- 231
           Q++   +A ++ +    LDL S  L+ +P  IG L +L  L +  N L E+P  IG+ + 
Sbjct: 8   QVAKQRIAEAKRIAAPTLDLCSLKLTEVPKEIGQLTNLIALSLSGNQLTEVPKEIGKLTN 67

Query: 232 ----------------------SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
                                 +L +LR+  NRL  +PE +G++ +L  LS+  N + ++
Sbjct: 68  LIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEV 127

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  +  L +L EL +S N+L  +P+ L    +L K+ +  N   L   P+ +G L  L E
Sbjct: 128 PKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQN--QLTEAPKELGKLINLME 185

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L +S NQ+  +P  F  L+ L  L + +N L   P+ + E+
Sbjct: 186 LYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGEL 226



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 4/101 (3%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L++    +P  +G+L +LV L L++N++  VP  +G L++L +L L  N++IE+P  
Sbjct: 374 QNQLIE----VPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKE 429

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           +G L SL  LDL  NQ++ +P  L +L +L  LDL +N+L+
Sbjct: 430 LGKLASLRELDLDQNQLTKVPKELGKLAKLVILDLSNNSLN 470


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 100/278 (35%), Positives = 155/278 (55%), Gaps = 8/278 (2%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +   P  I +L  L SLDLSENR+V +P  IG L +L++L L+ N++I  P  IG
Sbjct: 78  LFDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L+ NQ++ LPV + RL  LE+L+L  N L+ LP  IG L +L+ L ++ N 
Sbjct: 138 QLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N +K LP  +  L  L
Sbjct: 198 LATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNN-------FADLRALPRSIGNLEMLEELDI 332
            +L++  N++ ++P+     T   ++    N       +  L  LPR IG L+ L+ LD+
Sbjct: 258 EKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDL 317

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             NQ+  LP     L  L+ L +  N L + P+ I E+
Sbjct: 318 GGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWEL 355



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 146/266 (54%), Gaps = 14/266 (5%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L+L +NR+  +P  IG L +L+ L
Sbjct: 135 EIGQLQNLQTLNLQD---NQLATLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L L  NQ++  P  + +L  L+ELDL  N L +LP  I
Sbjct: 192 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEI 251

Query: 205 GSLISLKKL---------IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           G L  L+KL         + + N L  LP  IGQ  +L+ L + YNRL  LP  +G++  
Sbjct: 252 GQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQN 311

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ L +  N +  LP  ++ L +L+EL ++ N+L  VP+ +     L  + + NN   + 
Sbjct: 312 LKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNN--RIS 369

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLP 341
            LP+ I   + L+EL++  N++  LP
Sbjct: 370 TLPKEIEKSKNLQELNLRGNRLVTLP 395



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 139/259 (53%), Gaps = 11/259 (4%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  N++   P  I +L  L  LDL  N++  LP  
Sbjct: 53  LDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L+EL L  N L + P  IG L +L+ L ++ N L  LP  IG+  +L +L +  
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRK 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  LP+ +G++  L+ L+++ N +  LP  +  L +L+ L +S N+L + P+ +    
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLE 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM---------LSRLR 351
            L ++++  N   L+ LP+ IG L+ LE+L++  NQI  LP   ++         L  L+
Sbjct: 233 NLQELDLNGN--QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQ 290

Query: 352 VLRVQENPLEVPPRNIVEM 370
           +L +  N L   PR I ++
Sbjct: 291 ILSLSYNRLATLPREIGQL 309



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 242 NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 301

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 422 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 456

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 457 NNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I +L +L SL L +  +VA+P  I  L  L++L L  N++  LP  IG L +L  LD
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 658 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 93/313 (29%), Positives = 146/313 (46%), Gaps = 50/313 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 422 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 481

Query: 288 ELESVPESLCFA---------------TTLVKMNIG--------------NNFA------ 312
            L S       A                T   +N+                 F+      
Sbjct: 482 PLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEI 541

Query: 313 ----DLRAL----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV-QE 357
               +LR+L          P+ I  L+ LE L +  NQ++ LP    +L  LR L +   
Sbjct: 542 LRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGAN 601

Query: 358 NPLEVPPRNIVEM 370
           N  EV P+ I  +
Sbjct: 602 NEFEVLPKEIARL 614



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 137/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 414 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 473

Query: 165 VYL------------------------DLR----GNQISALPVALSRLVRLEELDLGSNN 196
             L                        DLR    G     L +AL + +++  L L    
Sbjct: 474 EVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQ 533

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 534 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 593

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 651

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N ++  P  I  +
Sbjct: 652 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 706



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 658 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 692

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I+ LP+    L  LR L + ENP  +PP+ +
Sbjct: 693 YNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L   +    P  I  L +L+ L L+   ++ LP  I  L  L  L L  NQ+ +
Sbjct: 523 KILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKS 582

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 583 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 642

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++++PE 
Sbjct: 643 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEE 702

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 703 IARLQNLRKLTLYEN 717



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 602 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 661

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N + +LP+ I  L +L+KL +  N
Sbjct: 662 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 2/139 (1%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           ++R L +       LP+ + K+  L+ L +  N +   P  +  L  L  LD+S N L  
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQKLESLDLSENRLVM 108

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P  +     L ++ +  N   L   P+ IG L+ L+ L++ +NQ+  LP     L  L 
Sbjct: 109 LPNEIGRLQNLQELGLYKN--KLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLE 166

Query: 352 VLRVQENPLEVPPRNIVEM 370
            L +++N L V P+ I ++
Sbjct: 167 KLNLRKNRLTVLPKEIGQL 185


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score =  161 bits (408), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 101/243 (41%), Positives = 149/243 (61%), Gaps = 2/243 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I +LP+ IG LS L  LDLS+     +P +IG L+SLKKL+L +N +  LP+SIG+L SL
Sbjct: 220 IPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSL 279

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N ++ LP ++  L RL+    GSN LS LP+SIG+L SL++L +   DL  LP
Sbjct: 280 EELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLP 339

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG   SL  L ++ + L ALP+++G + +LE L++  N +  LP ++ +L+ L  LD+
Sbjct: 340 ESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDL 399

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L ++PES+   T+L +  + NN   L  LP SIGNL  L  L +  N +  LP+S 
Sbjct: 400 QGNKLTTLPESIGNLTSLDEFILNNN--ALTVLPESIGNLIKLSALYLFGNDLTTLPESI 457

Query: 345 RML 347
             L
Sbjct: 458 GSL 460



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 131/220 (59%), Gaps = 2/220 (0%)

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
           A+ I  LP+ IG L  L  LDL     + LP ++  L  L++L+L SNNL++LP+SIG+L
Sbjct: 217 AHPIPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGNL 276

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            SL++L +  N+L  LP +IG  S L+      N+L  LPE++G + +LE L +R  ++ 
Sbjct: 277 TSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLT 336

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP ++ +L SL  L ++ + L ++P+S+   T+L K+N+  N   L  LP SIGNL  L
Sbjct: 337 TLPESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGN--RLTTLPESIGNLTRL 394

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + LD+  N++  LP+S   L+ L    +  N L V P +I
Sbjct: 395 DLLDLQGNKLTTLPESIGNLTSLDEFILNNNALTVLPESI 434



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/231 (37%), Positives = 135/231 (58%), Gaps = 33/231 (14%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N + +N+  LP+SIG L+SL  L L +N +  +P +IG LS LK     +N++  LP+SI
Sbjct: 260 NLVSNNLTTLPESIGNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESI 319

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G+L S                       LEEL L   +L++LP+SIG+LISL++L +  +
Sbjct: 320 GNLTS-----------------------LEELFLRETDLTTLPESIGNLISLERLYLNES 356

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           +L  LP +IG  +SL +L +D NRL  LPE++G +  L++L ++ N +  LP ++ +L+S
Sbjct: 357 NLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTTLPESIGNLTS 416

Query: 279 LRELDVSFNELESVPESLCFATTLVKMN----IGNNFADLRALPRSIGNLE 325
           L E  ++ N L  +PES+     L+K++     GN   DL  LP SIG+L+
Sbjct: 417 LDEFILNNNALTVLPESIG---NLIKLSALYLFGN---DLTTLPESIGSLK 461



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 122/198 (61%), Gaps = 2/198 (1%)

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
           + + I  LP  +  L +LEELDL     ++LP+SIG+L SLKKL + +N+L  LP +IG 
Sbjct: 216 KAHPIPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPESIGN 275

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL EL +  N L  LPE++G +  L+      N +  LP ++ +L+SL EL +   +L
Sbjct: 276 LTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDL 335

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            ++PES+    +L ++ +  N ++L ALP+SIGNL  LE+L++  N++  LP+S   L+R
Sbjct: 336 TTLPESIGNLISLERLYL--NESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTR 393

Query: 350 LRVLRVQENPLEVPPRNI 367
           L +L +Q N L   P +I
Sbjct: 394 LDLLDLQGNKLTTLPESI 411



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 54/155 (34%), Positives = 84/155 (54%), Gaps = 2/155 (1%)

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           +I + + +  LP  IG  S L EL +       LPE++G + +L+ L++  NN+  LP +
Sbjct: 213 VITKAHPIPYLPEEIGSLSKLEELDLSQCGFTTLPESIGNLTSLKKLNLVSNNLTTLPES 272

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           + +L+SL EL +  N L ++PES+   + L     G+N   L  LP SIGNL  LEEL +
Sbjct: 273 IGNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSN--KLSVLPESIGNLTSLEELFL 330

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
               +  LP+S   L  L  L + E+ L   P++I
Sbjct: 331 RETDLTTLPESIGNLISLERLYLNESNLTALPQSI 365


>gi|432117302|gb|ELK37689.1| Malignant fibrous histiocytoma-amplified sequence 1 [Myotis
           davidii]
          Length = 968

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 164/288 (56%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+
Sbjct: 42  DVVSALHELRKLNLSHNQLPALPAQLGSLAHLEELDVSFNRLAHLPDSLSCLCRLRTLDV 101

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 102 DHNQLTAFPGQLLQLAALEELDVSSNRLRGLPEGISALRALKILWLSGAELGTLPEGFCE 161

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D NRL+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L
Sbjct: 162 LASLESLMLDNNRLQALPTQFSHLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQL 221

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            +VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 222 TAVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 279

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 280 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 322


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 153/257 (59%), Gaps = 2/257 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L  L+L+ N++  +   IG L +L+ LDL  N++  LP+ IG+L 
Sbjct: 198 NQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQ 257

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL GNQ++ALP  +  L  L+ LDL  N L++LP+ IG+L +L+ L +E N L  
Sbjct: 258 NLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTT 317

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+   L++L +  NRL  LP+ +GK+  L+ LS+ +N +K LP  +  L +L+ L
Sbjct: 318 LPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKIL 377

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P+ +     L+ +++  N   L  LP+ IG L+ L+ LD+  NQ+  LP 
Sbjct: 378 SLGSNQLTTLPKEVGKLQNLIMLDLHGN--QLTTLPKEIGKLQNLKMLDLHGNQLMTLPK 435

Query: 343 SFRMLSRLRVLRVQENP 359
               L  L+ L +  NP
Sbjct: 436 EIGKLQNLKELNLVGNP 452



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 153/291 (52%), Gaps = 25/291 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG L +L +L+L+ N+   +P  IG L  L+KLDL  N++  LP  IG L 
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQ 211

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ L   +  L  L+ LDLG N L++LP+ IG+L +L+ L +E N L  
Sbjct: 212 NLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAA 271

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP------------ 270
           LP  IG   +L+ L ++ N+L  LPE +G +  L+ L +  N +  LP            
Sbjct: 272 LPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKL 331

Query: 271 -------TTM----SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
                  TT+      L  L+ L +  N+L+++P+ +     L  +++G+N   L  LP+
Sbjct: 332 YLYNNRLTTLPKEIGKLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSN--QLTTLPK 389

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +G L+ L  LD+  NQ+  LP     L  L++L +  N L   P+ I ++
Sbjct: 390 EVGKLQNLIMLDLHGNQLTTLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKL 440


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 120/345 (34%), Positives = 186/345 (53%), Gaps = 38/345 (11%)

Query: 75  LSLIKLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  KL +L  E+      R L+L+N   + +  LP  IGKL +L SL+L++N++ A+P 
Sbjct: 23  LSFKKLETLPPEIGKLTALRYLDLRN---NKLTTLPSEIGKLINLTSLNLTDNQLTALPP 79

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIG-----------------------DLLSLVYLDLR 170
            IG LS+L +L L  N++  LP  IG                       +L+ +  L L 
Sbjct: 80  EIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRLSLS 139

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP A+  L+RL  LDL +N L++LP  IG L SL +L V  N L  LP  IGQ 
Sbjct: 140 YNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQL 199

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L  + V YN+L +LP  +G++  L+ L++  N +  LP  +  LS+L  L++S+N+L 
Sbjct: 200 LNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNKLS 259

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS-- 348
           S+P  +   T L+++ + +N   L+ LP  IG+L  L  L + NNQ+  LP  F ++   
Sbjct: 260 SLPPEIGQLTKLIQLRLSHN--QLQELPAEIGHLTQLTSLVLKNNQLLTLP--FELIQLV 315

Query: 349 ---RLRVLRVQENPLEVPPRNIVEMGAQAVVQ--YMADLVEKRDA 388
              +L  L +QEN L +PP  I       ++   Y+  LVEK+ +
Sbjct: 316 QFFKLTQLDLQENLLSIPPEIIWRKDEPDLIVNFYLHQLVEKKQS 360



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 138/251 (54%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS  ++  +P  IG L++L+ LDL  N++  LP  IG L++L  L+L  NQ++ALP 
Sbjct: 20  TLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALPP 79

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L  L L  N L+SLP  IG L  L +L +  N LE LP TI     +  L + 
Sbjct: 80  EIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRLSLS 139

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN+L  LP A+  +  L  L +  N +  LP  +  L+SL +LDV +N+L ++P  +   
Sbjct: 140 YNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPPEIGQL 199

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L+ +++  N   L +LP  IG L  L+ L ISNNQ+ +LP     LS L  L +  N 
Sbjct: 200 LNLISIDVSYN--KLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNLSYNK 257

Query: 360 LEVPPRNIVEM 370
           L   P  I ++
Sbjct: 258 LSSLPPEIGQL 268



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 96/185 (51%), Gaps = 2/185 (1%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           + E LDL    L +LP  IG L +L+ L +  N L  LP  IG+  +L  L +  N+L A
Sbjct: 17  KAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTA 76

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP  +GK+  L  L + YN +  LP  +  L+ L EL +S N LE++P ++     + ++
Sbjct: 77  LPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISRL 136

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L  LP +I  L  L  LD++NNQ+  LP     L+ L  L V  N L   P 
Sbjct: 137 SLSYN--QLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLPP 194

Query: 366 NIVEM 370
            I ++
Sbjct: 195 EIGQL 199


>gi|359485043|ref|XP_002266645.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Vitis
           vinifera]
          Length = 351

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 153/262 (58%), Gaps = 5/262 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L ++  LDL  N +  +P +L+ RL+ +  LD+ SN L S
Sbjct: 36  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 95

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L +  N ++ LP TI  C SL EL  ++N+L  LP+ +G ++  ++ 
Sbjct: 96  LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKK 155

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP++ S L+SL+ LD   N L ++PE L     L  +N+  NF  L  LP
Sbjct: 156 LSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLP 215

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD S N+I  LPDS   L +L+ L V+ NPL  PP  +VE G QAV +Y
Sbjct: 216 YSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEY 275

Query: 379 MADLVEKRDAKTQPVKQKKSWV 400
           ++   EK  A  +   +KKSW+
Sbjct: 276 LS---EKMTAAHRCSPKKKSWI 294



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKL 144
           SS      L + +  ++ +  LP+ +  L +L  L++S+N   +  +P +IG L SL +L
Sbjct: 168 SSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVEL 227

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           D   NRI  LPDS+G L  L  L + GN + + P+
Sbjct: 228 DASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPM 262


>gi|147771824|emb|CAN71340.1| hypothetical protein VITISV_043793 [Vitis vinifera]
          Length = 355

 Score =  161 bits (407), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/262 (40%), Positives = 153/262 (58%), Gaps = 5/262 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L ++  LDL  N +  +P +L+ RL+ +  LD+ SN L S
Sbjct: 40  LEIVDLSGMSLDALPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKS 99

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L +  N ++ LP TI  C SL EL  ++N+L  LP+ +G ++  ++ 
Sbjct: 100 LPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKK 159

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP++ S L+SL+ LD   N L ++PE L     L  +N+  NF  L  LP
Sbjct: 160 LSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLP 219

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD S N+I  LPDS   L +L+ L V+ NPL  PP  +VE G QAV +Y
Sbjct: 220 YSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEY 279

Query: 379 MADLVEKRDAKTQPVKQKKSWV 400
           ++   EK  A  +   +KKSW+
Sbjct: 280 LS---EKMTAAHRCSPKKKSWI 298



 Score = 43.1 bits (100), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKL 144
           SS      L + +  ++ +  LP+ +  L +L  L++S+N   +  +P +IG L SL +L
Sbjct: 172 SSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVEL 231

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           D   NRI  LPDS+G L  L  L + GN + + P+
Sbjct: 232 DASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPM 266


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 152/265 (57%), Gaps = 3/265 (1%)

Query: 107 W-LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           W LP  IGKL +L  LDLS N+++ +P  IG L +L+KLDL  N++  LP  IG L +L 
Sbjct: 25  WTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQ 84

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L+L  NQ++ L   +  L  L+ LDLG N L++LP+ I +L +L+ L +  N L  LP 
Sbjct: 85  KLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPE 144

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I    +L+ L +  N+L  LPE +G +  L+ L +  N +  LP  + +L +L+ LD+ 
Sbjct: 145 EIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLE 204

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +     L K+ + NN   L  LP+ +G L+ L+EL + NN++  LP    
Sbjct: 205 GNQLTTLPKEIGKLQNLKKLYLYNNR--LTTLPKEVGKLQNLQELYLYNNRLTTLPKEIE 262

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L++L +  N L   P+ + ++
Sbjct: 263 DLQNLKILSLGSNQLTTLPKEVGKL 287



 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 148/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I  L +L +LDL  N++  +P  I  L +L+ LDL  N++  LP+ IG+L +L  L
Sbjct: 119 LPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTL 178

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ++ LP  +  L  L+ LDL  N L++LP  IG L +LKKL +  N L  LP  +
Sbjct: 179 DLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEV 238

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+EL +  NRL  LP+ +  +  L++LS+  N +  LP  +  L +L+EL +  N
Sbjct: 239 GKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNN 298

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  +N+ +N      LP+ I NL+ L++L +  NQ+  LP+    L
Sbjct: 299 RLTTLPKEIGNLQNLQDLNLNSN--QFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNL 356

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L ++ N L   P  I
Sbjct: 357 QNLKTLDLEGNQLATLPEEI 376



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 150/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG L +L +LDL  N++  +P  I  L +L+ LDL  N++  LP+ I +L +L  L
Sbjct: 96  LSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTL 155

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  +  L  L+ LDL  N L++LP+ IG+L +L+ L +E N L  LP  I
Sbjct: 156 DLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEI 215

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L++L +  NRL  LP+ VGK+  L+ L +  N +  LP  +  L +L+ L +  N
Sbjct: 216 GKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSN 275

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L ++ + NN   L  LP+ IGNL+ L++L++++NQ   LP     L
Sbjct: 276 QLTTLPKEVGKLQNLQELYLYNNR--LTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNL 333

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L+ L +  N L   P  I
Sbjct: 334 QKLQKLSLGRNQLTTLPEEI 353



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 148/273 (54%), Gaps = 21/273 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG L +L +LDL  N++  +P  IG L +LKKL L+ NR+  LP  +G L +L  L
Sbjct: 188 LPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQEL 247

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP  +  L  L+ L LGSN L++LP  +G L +L++L +  N L  LP  I
Sbjct: 248 YLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEI 307

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L++L ++ N+   LP+ +  +  L+ LS+  N +  LP  + +L +L+ LD+  N
Sbjct: 308 GNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGN 367

Query: 288 ELESVPESLCFATTLVKMNI-GNNFAD--------------------LRALPRSIGNLEM 326
           +L ++PE +     L K+++ GN                        L  LP  IGNL+ 
Sbjct: 368 QLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPIEIGNLQK 427

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           L+ L + +NQ+  LP     L +L++L +  NP
Sbjct: 428 LQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNP 460



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/247 (33%), Positives = 138/247 (55%), Gaps = 2/247 (0%)

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           S + +  +P  IG L +L+ LDL +N+++ LP  IG L +L  LDL  NQ++ LP  + +
Sbjct: 20  SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQ 79

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L  L++L+L SN L++L   IG+L +L+ L +  N L  LP  I    +L+ L +  N+L
Sbjct: 80  LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQL 139

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             LPE +  +  L+ L +  N +  LP  + +L +L+ LD+  N+L ++PE +     L 
Sbjct: 140 TTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQ 199

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++  N   L  LP+ IG L+ L++L + NN++  LP     L  L+ L +  N L   
Sbjct: 200 TLDLEGN--QLTTLPKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTL 257

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 258 PKEIEDL 264



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           RE +   + L  LP+ +GK+  L  L +  N +  LP  +  L +L++LD+S N+L ++P
Sbjct: 15  RERKNSNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLP 74

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + +     L K+N+ +N   L  L + IGNL+ L+ LD+  NQ+  LP+    L  L+ L
Sbjct: 75  KEIGQLQNLQKLNLNSN--QLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTL 132

Query: 354 RVQENPLEVPPRNI 367
            +  N L   P  I
Sbjct: 133 DLGRNQLTTLPEEI 146


>gi|327403779|ref|YP_004344617.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327319287|gb|AEA43779.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 575

 Score =  160 bits (406), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/290 (35%), Positives = 160/290 (55%), Gaps = 22/290 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N   +P  I +LS L  LD SEN +  +P  IG LS LK+L+L  N+I EL +++G+L 
Sbjct: 248 NNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELS 307

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLE 221
            L  L+L  N    LP A+ +L  LEEL +G N+ L+ +P+SIG L  L++L V  + L 
Sbjct: 308 KLTKLNLTKNAFQQLPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLI 367

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP +IG+ + L  L +  NR++ LPE+ G + +L+ L +  N + QLP +  +L  L+E
Sbjct: 368 SLPESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKE 427

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRS 320
           LD+S N L ++P S+ +   L  + + NN                        ++ LP S
Sbjct: 428 LDLSENRLTTLPASIEYMENLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPSS 487

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +G L+ LE L++S N I+ LP S R LS L VL + +N     P+ I  +
Sbjct: 488 LGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIFRL 537



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/297 (34%), Positives = 156/297 (52%), Gaps = 26/297 (8%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD------------------ 145
           +++  P SI  L+ L  L L  N  ++VPA I  LS LK LD                  
Sbjct: 226 DLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEIGRLSD 285

Query: 146 -----LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN-LSS 199
                L  N+I EL +++G+L  L  L+L  N    LP A+ +L  LEEL +G N+ L+ 
Sbjct: 286 LKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNAIGQLKLLEELHIGFNDFLTK 345

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P+SIG L  L++L V  + L  LP +IG+ + L  L +  NR++ LPE+ G + +L+ L
Sbjct: 346 IPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDLESLKYL 405

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N + QLP +  +L  L+ELD+S N L ++P S+ +   L  + + NN  +L  LP 
Sbjct: 406 RIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNN--ELTTLPF 463

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           SIG LE L  L    N I+ LP S   L  L  L +  N ++  PR+I  + +  V+
Sbjct: 464 SIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVL 520



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/208 (39%), Positives = 127/208 (61%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  +P+SIG LS L  L + ++ ++++P +IG L+ L+ L +  NRI  LP+S GDL 
Sbjct: 341 DFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNNRIRVLPESFGDLE 400

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL YL +  N+++ LP +   L  L+ELDL  N L++LP SI  + +L  L+++ N+L  
Sbjct: 401 SLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYMENLTILVLDNNELTT 460

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IGQ   L  L    N +K LP ++GK+  LE L++ YNNI++LP ++  LSSL  L
Sbjct: 461 LPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQKLPRSIRHLSSLFVL 520

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNN 310
           D+S N+    P+ +     L K N+  N
Sbjct: 521 DISDNKFSRFPKVIFRLHQLKKCNLEEN 548



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 143/269 (53%), Gaps = 12/269 (4%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           S +  LDLS    +  P      + LK L+L    + E P SI  L  L YL L  N   
Sbjct: 192 SIVYHLDLSVQFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFL 251

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           ++P  +++L  L+ LD   NNL+++P  IG L  LK+L +  N ++EL   +G+ S L +
Sbjct: 252 SVPAEIAQLSHLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTK 311

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPE 294
           L +  N  + LP A+G++  LE L + +N+ + ++P ++  LS LR L V  + L S+PE
Sbjct: 312 LNLTKNAFQQLPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPE 371

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           S+     L  +++ NN   +R LP S G+LE L+ L I  N++  LPDSF  L  L+ L 
Sbjct: 372 SIGKLNQLELLSMFNN--RIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELD 429

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           + EN L   P         A ++YM +L 
Sbjct: 430 LSENRLTTLP---------ASIEYMENLT 449



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 136/263 (51%), Gaps = 3/263 (1%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P      + L +L+LS   +   P +I  L+ L+ L L  N  + +P  I  L  L YLD
Sbjct: 208 PLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLD 267

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
              N ++ +P  + RL  L+EL+L  N +  L +++G L  L KL +  N  ++LP+ IG
Sbjct: 268 FSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNAIG 327

Query: 229 QCSSLRELRVDYNR-LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           Q   L EL + +N  L  +PE++G +  L  L+V  + +  LP ++  L+ L  L +  N
Sbjct: 328 QLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPKSGLISLPESIGKLNQLELLSMFNN 387

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            +  +PES     +L  + I  N   L  LP S GNL +L+ELD+S N++  LP S   +
Sbjct: 388 RIRVLPESFGDLESLKYLRIHKN--KLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYM 445

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L +L +  N L   P +I ++
Sbjct: 446 ENLTILVLDNNELTTLPFSIGQL 468



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 152/337 (45%), Gaps = 62/337 (18%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L+   +DN   LP S   L+ L  L +  N+   +P  +  L  L+ L
Sbjct: 85  EIDKLENLKFLDLKGNSLDN---LPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRIL 141

Query: 145 DLHANRIIELPD-----------SIGDL---------------------LSLVY-LDLRG 171
            +  N+I  LP+            I D+                      S+VY LDL  
Sbjct: 142 KIRENQIHSLPEFREGFTALSMLYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLDLSV 201

Query: 172 NQISALPVALSRLVRLEELD-----------------------LGSNNLSSLPDSIGSLI 208
                 P+  S    L+ L+                       LG NN  S+P  I  L 
Sbjct: 202 QFTLPRPLDFSSFTELKTLNLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLS 261

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            LK L    N+L  +P  IG+ S L+EL + +N++K L E +G++  L  L++  N  +Q
Sbjct: 262 HLKYLDFSENNLTTIPQEIGRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQ 321

Query: 269 LPTTMSSLSSLRELDVSFNE-LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
           LP  +  L  L EL + FN+ L  +PES+   + L ++ +    + L +LP SIG L  L
Sbjct: 322 LPNAIGQLKLLEELHIGFNDFLTKIPESIGDLSHLRRLTVPK--SGLISLPESIGKLNQL 379

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           E L + NN+IRVLP+SF  L  L+ LR+ +N L   P
Sbjct: 380 ELLSMFNNRIRVLPESFGDLESLKYLRIHKNKLTQLP 416



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 81/289 (28%), Positives = 140/289 (48%), Gaps = 37/289 (12%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           S +  L L+   I   P +I  + +L++L L +N I  +P+ I  L +L +LDL+GN + 
Sbjct: 44  SDVYKLFLNSQSIKNFPISILSMKNLEELHLSSNLIPVIPEEIDKLENLKFLDLKGNSLD 103

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP +   L +LE L + +N    LPD +  L  L+ L +  N +  LP      ++L  
Sbjct: 104 NLPASFRNLNKLEHLSIETNKFKELPDELSLLKKLRILKIRENQIHSLPEFREGFTALSM 163

Query: 236 LRVD-------------YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L +D             Y  LK   E+   ++ L+ LSV++   +  P   SS + L+ L
Sbjct: 164 LYIDDINLSSDWQKYKVYTNLKKAKESPSIVYHLD-LSVQFTLPR--PLDFSSFTELKTL 220

Query: 283 DVSFNELESVPESLCFATTLVKMNIG-NNF--------------------ADLRALPRSI 321
           ++S+ +L+  P S+   T L  +++G NNF                     +L  +P+ I
Sbjct: 221 NLSYCDLKEFPMSIMTLTHLEYLHLGRNNFLSVPAEIAQLSHLKYLDFSENNLTTIPQEI 280

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L  L+EL+++ NQI+ L ++   LS+L  L + +N  +  P  I ++
Sbjct: 281 GRLSDLKELNLAFNQIKELSENLGELSKLTKLNLTKNAFQQLPNAIGQL 329



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 93/163 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+S G L SL  L + +N++  +P + G L  LK+LDL  NR+  LP SI  + 
Sbjct: 387 NRIRVLPESFGDLESLKYLRIHKNKLTQLPDSFGNLRLLKELDLSENRLTTLPASIEYME 446

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N+++ LP ++ +L  L  L    N + +LP S+G L +L+ L +  N++++
Sbjct: 447 NLTILVLDNNELTTLPFSIGQLECLTSLSAYINTIKTLPSSLGKLKNLENLNLSYNNIQK 506

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           LP +I   SSL  L +  N+    P+ + ++H L+  ++  N+
Sbjct: 507 LPRSIRHLSSLFVLDISDNKFSRFPKVIFRLHQLKKCNLEEND 549



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 26/60 (43%), Positives = 33/60 (55%), Gaps = 3/60 (5%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K   +LNL     +NI+ LP SI  LSSL  LD+S+N+    P  I  L  LKK +L  N
Sbjct: 492 KNLENLNLS---YNNIQKLPRSIRHLSSLFVLDISDNKFSRFPKVIFRLHQLKKCNLEEN 548


>gi|345781592|ref|XP_532819.3| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Canis lupus
           familiaris]
          Length = 1043

 Score =  160 bits (406), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 166/288 (57%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +++  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  LL L  LD+
Sbjct: 120 EAVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLLRLRTLDV 179

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 180 DHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCE 239

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L
Sbjct: 240 LASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQL 299

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 300 TSVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 357

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 358 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 400



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 138/283 (48%), Gaps = 33/283 (11%)

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGD-LLSLVYLDLRGNQISALPVALSRL-VR 186
           +A+PA+   L+ ++ L+L  N+  E+PD +G  L SL  L LR N+ + LP A++ L  R
Sbjct: 47  LALPAS---LADVEVLNLGNNKXDEVPDGLGAALCSLRVLVLRRNRFARLPAAVAELGPR 103

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L ELD+  N LS+L    G+                    +     LR+L + +N+L AL
Sbjct: 104 LTELDVSHNRLSAL----GA------------------EAVSALRELRKLNLSHNQLPAL 141

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P  +G +  LE L V +N +  LP ++S L  LR LDV  N+L + P  L     L +++
Sbjct: 142 PAQLGALAHLEELDVSFNRLAHLPDSLSCLLRLRTLDVDHNQLTAFPRQLLQLAALEELD 201

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + +N   LR LP  I  L  L+ L +S  ++  LP  F  L+ L  L +  N L   P  
Sbjct: 202 VSSN--RLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRALPAQ 259

Query: 367 IVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
              +    ++   ++L E+  A   P+    + +E  + SR+ 
Sbjct: 260 FSRLQRLKMLNLSSNLFEEFPAALLPL----AGLEELYLSRNQ 298


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/263 (38%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  L    N +  +P  I  L +L+ LDLH+N++  L   IG L  L  L
Sbjct: 298 LPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQEL 357

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+EL LG N L++LP+ IG L  LKKL +  N L  LP  I
Sbjct: 358 HLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEI 417

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    LR L +  N+L ALP  +G +  L+ L + +N +K LP  + +L  LR LD+S N
Sbjct: 418 GNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQKLRGLDLSDN 477

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +++ +N   L  LP+ IGNL+ LE L +S NQ+  LP     L
Sbjct: 478 QLTTIPEEIGNLQKLRGLDLSDN--QLTTLPKEIGNLQDLEVLYLSGNQLTTLPKEIENL 535

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L +  NPL   P  I ++
Sbjct: 536 QSLESLNLSNNPLTSFPEEIGKL 558



 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 158/283 (55%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + ++ LP  IGKL +L  L L+ N++  +P  IG L +L+ L
Sbjct: 232 EIGKLQNLQGLHLNN---NQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGL 288

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            LH N++  LP  IG L  L  L    N+++ LP  + +L  L+ LDL SN L++L   I
Sbjct: 289 GLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEI 348

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L++L + +N L  LP  IG+   L+EL +  N+L  LPE +GK+  L+ L +  N
Sbjct: 349 GKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNN 408

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  + +L  LR LD+  N+L ++P  +     L  + +   F  L+ LP+ IGNL
Sbjct: 409 RLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYL--TFNQLKTLPKEIGNL 466

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L  LD+S+NQ+  +P+    L +LR L + +N L   P+ I
Sbjct: 467 QKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEI 509



 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/321 (32%), Positives = 167/321 (52%), Gaps = 8/321 (2%)

Query: 54  FRNKVPIM---IMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDN-IEWLP 109
           FRN   I+   ++C CC  +  EK     L   ++  +    R L+LQ K  ++ +  LP
Sbjct: 12  FRNIGVILSTILLCFCCTIEAKEKGKYYNLTKALQHPT--DVRYLDLQAKDSNHKLTNLP 69

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
             IG L +L  L L  N++  +P  IG L  L+ LDL+ N +  LP  IG L  L  L L
Sbjct: 70  KEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRL 129

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++  P  + +L +L++L L  N L++LP  IG L  LK L ++ N    LP  I +
Sbjct: 130 PNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEIEK 189

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
              L+EL +  N+   LP+ + K+  L+ L +  N +K LP  +  L +L+ L ++ N+L
Sbjct: 190 LQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQL 249

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           +++P+ +     L  +++ NN   L  LP+ IG L+ L+ L +  NQ+  LP     L +
Sbjct: 250 KTLPKEIGKLQNLQGLHLNNN--QLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQK 307

Query: 350 LRVLRVQENPLEVPPRNIVEM 370
           L+VL    N L   P+ I ++
Sbjct: 308 LQVLSFYSNELTTLPKEIKKL 328



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  L L  N++   P  I  L  L+KL L  N++  LP  IG L  L  L
Sbjct: 114 LPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVL 173

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ + LP  + +L +L+EL LGSN  ++LP  I  L +L+ L +  N L+ LP  I
Sbjct: 174 NLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQLKTLPKEI 233

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L ++ N+LK LP+ +GK+  L+ L +  N +  LP  +  L +L+ L + +N
Sbjct: 234 GKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYN 293

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  ++  +N  +L  LP+ I  L+ L+ LD+ +NQ+  L      L
Sbjct: 294 QLTTLPKEIGKLQKLQVLSFYSN--ELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKL 351

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 352 QKLQELHLSSNQLTTLPKEIGKL 374



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/260 (35%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I KL +L  L L+ N++  +P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 206 LPKEIKKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGL 265

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L L  N L++LP  IG L  L+ L   +N+L  LP  I
Sbjct: 266 HLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEI 325

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L +  N+L  L + +GK+  L+ L +  N +  LP  +  L  L+EL +  N
Sbjct: 326 KKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDN 385

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ + NN   L  LP+ IGNL+ L  LD+ NN++  LP     L
Sbjct: 386 QLTTLPEEIGKLQKLKKLYLYNN--RLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNL 443

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L+ L +  N L+  P+ I
Sbjct: 444 QKLKWLYLTFNQLKTLPKEI 463



 Score =  101 bits (252), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 99/186 (53%), Gaps = 5/186 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL  L  L L  NR+  +P  IG L  L+ LDL  N++  LP  IG+L  L +L
Sbjct: 390 LPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWL 449

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  +  L +L  LDL  N L+++P+ IG+L  L+ L +  N L  LP  I
Sbjct: 450 YLTFNQLKTLPKEIGNLQKLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEI 509

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N+L  LP+ +  + +LE L++  N +   P  +  L  L+ L     
Sbjct: 510 GNLQDLEVLYLSGNQLTTLPKEIENLQSLESLNLSNNPLTSFPEEIGKLQHLKWL----- 564

Query: 288 ELESVP 293
            LE++P
Sbjct: 565 RLENIP 570


>gi|125548711|gb|EAY94533.1| hypothetical protein OsI_16309 [Oryza sativa Indica Group]
          Length = 517

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 101/240 (42%), Positives = 141/240 (58%), Gaps = 13/240 (5%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL----PVA--------LSRLVRLEELDLGSNNLSSL 200
            LP++ G +  L  LD+  NQ+  +    P A          RL  LEEL L SN L SL
Sbjct: 212 HLPEAFGRIQGLRVLDVSRNQLEMIRNIGPYAKCVRYSKCYRRLDHLEELRLASNALISL 271

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           PDSIG L++L+ L V +N L  LP +I +C SL EL   YN L  LP  +G ++  L  L
Sbjct: 272 PDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKL 331

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V  N ++ LP+++  + SL  LD  FNEL  +P ++   ++L  +N+ +NF+DL+ LP 
Sbjct: 332 WVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPA 391

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S G+L  L ELD+SNNQI  LPD+F  L +L  L +++NPL +PP  IV  G  AV +YM
Sbjct: 392 SFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPPMEIVNKGVDAVKEYM 451



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 100/169 (59%), Gaps = 8/169 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DLLSLVY 166
           LPDSIG L +L  L++  NR+ ++P +I    SL +LD   N +  LP +IG +L++L  
Sbjct: 271 LPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRK 330

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--DLEELP 224
           L +  N++ +LP ++  +  L  LD   N L  LP +IG L SL+ L + +N  DL++LP
Sbjct: 331 LWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLP 390

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + G   +LREL +  N++ ALP+  G++  LE L     N++Q P +M
Sbjct: 391 ASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKL-----NLEQNPLSM 434



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 13/178 (7%)

Query: 29  SFIPLFSSFCLLLTDFLILQLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSS 88
           + I L  S  LLL +  IL +GS   R+    +  C   +  D     L  L + I    
Sbjct: 267 ALISLPDSIGLLL-NLRILNVGSNRLRSLPDSISKCRSLIELDASYNGLAYLPTNI---- 321

Query: 89  KKGTRDLNLQNKL---MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
             G   +NL+ KL   M+ +  LP SI ++ SL  LD   N +  +P+ IG LSSL+ L+
Sbjct: 322 --GYELVNLR-KLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILN 378

Query: 146 LHAN--RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           L +N   + +LP S GDLL+L  LDL  NQI ALP    RL +LE+L+L  N LS  P
Sbjct: 379 LSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPP 436



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/91 (40%), Positives = 54/91 (59%), Gaps = 2/91 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANR 150
           R L L +   + +  LP +IGKLSSL  L+LS N   +  +PA+ G L +L++LDL  N+
Sbjct: 349 RSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQ 408

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           I  LPD+ G L  L  L+L  N +S  P+ +
Sbjct: 409 IHALPDNFGRLDKLEKLNLEQNPLSMPPMEI 439


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 152/262 (58%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L +L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ+++LP  + +L  LE LDL  N  +SLP  IG L +L+ L +  N L  LP  I
Sbjct: 92  NLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +  N+  +LP+ +G++  LE L++ +N     P  +    SL+ L +S +
Sbjct: 152 GQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGD 211

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  +++ +N   L +LP+ IG L+ L EL++ +N+++ LP     L
Sbjct: 212 QLKTLPKEILLLQNLQSLHLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQL 269

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
            +L VLR+  N   +  +  ++
Sbjct: 270 QKLEVLRLYSNSFSLKEKQKIQ 291



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/197 (31%), Positives = 99/197 (50%), Gaps = 21/197 (10%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQ 120

Query: 311 FA--------------------DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           F                      L +LP+ IG L+ LE LD++ NQ   LP     L +L
Sbjct: 121 FTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 180

Query: 351 RVLRVQENPLEVPPRNI 367
             L +  N   + P+ I
Sbjct: 181 EALNLDHNRFTIFPKEI 197



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/153 (34%), Positives = 83/153 (54%), Gaps = 2/153 (1%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           ++LE LP  IG   +L +L +D N+L +LP+ +G++  L VL++  N    LP  +  L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  LD+  N+  S+P+ +     L  +N+  N   L +LP+ IG L+ LE LD+  NQ 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGN--QLTSLPKEIGQLQNLERLDLDGNQF 121

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP     L  LRVL +  N L   P+ I ++
Sbjct: 122 TSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQL 154


>gi|357479483|ref|XP_003610027.1| Leucine rich repeat protein [Medicago truncatula]
 gi|355511082|gb|AES92224.1| Leucine rich repeat protein [Medicago truncatula]
          Length = 343

 Score =  160 bits (405), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/262 (40%), Positives = 154/262 (58%), Gaps = 5/262 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L ++  LDL  N +  +P +L+ RL+ +  LD+ SN L S
Sbjct: 28  LEIVDLSGMSLESLPNPSLNLATICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRS 87

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N +  LP TI  C +L +L +++N+L  LP+ +G ++  L+ 
Sbjct: 88  LPNSIGCLSRLKLLNVSGNLIHTLPKTIENCRALEDLNLNFNKLSQLPDTIGYELINLKK 147

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP + S L+SL+ LD   N L S+PE L     L  +N+  NF  L ++P
Sbjct: 148 LSVNSNKLIFLPRSTSHLTSLKVLDARLNCLRSLPEDLENLINLEILNVSQNFQYLTSIP 207

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S+G L  L ELD+S N+IR LPDS   L++L+ L V+ NPL  PP  +VE G   V +Y
Sbjct: 208 YSVGLLLSLTELDVSYNKIRSLPDSIGCLNKLQKLSVEGNPLTSPPPEVVERGLHIVKEY 267

Query: 379 MADLVEKRDAKTQPVKQKKSWV 400
           + +   K +A  Q   +KKSWV
Sbjct: 268 LCN---KMNAGHQSPTKKKSWV 286



 Score = 45.8 bits (107), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 2/73 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP+ +  L +L  L++S+N   + ++P ++G L SL +LD+  N+I  LPDSIG L  L 
Sbjct: 181 LPEDLENLINLEILNVSQNFQYLTSIPYSVGLLLSLTELDVSYNKIRSLPDSIGCLNKLQ 240

Query: 166 YLDLRGNQISALP 178
            L + GN +++ P
Sbjct: 241 KLSVEGNPLTSPP 253



 Score = 39.7 bits (91), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)

Query: 103 DNIEWL---PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
            N ++L   P S+G L SL  LD+S N+I ++P +IG L+ L+KL +  N +   P  +
Sbjct: 198 QNFQYLTSIPYSVGLLLSLTELDVSYNKIRSLPDSIGCLNKLQKLSVEGNPLTSPPPEV 256


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/297 (35%), Positives = 163/297 (54%), Gaps = 6/297 (2%)

Query: 75  LSLIKLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  KL +L  ++      R L+L+N   + +  LP  IGKL  L SL+L++N++ A+P 
Sbjct: 23  LSFKKLETLPPQIEQLTHLRYLDLRN---NKLTTLPPQIGKLKKLTSLNLTDNQLSALPP 79

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            IG L++L +L L  N++  LP+ IG L  L  L L  N +  LP  L+ LV +  L L 
Sbjct: 80  EIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLS 139

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            N  +SLP  I  LISL    +  N L  LP  IGQ  SL +L + YN+L  LP  +G++
Sbjct: 140 YNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGEL 199

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
           + L  L V YN +  LP  +  L +L  L +S N+L ++P  + F + L+ +N+  N   
Sbjct: 200 YRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLSYN--Q 257

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L ++P  IG L  L +  +S+N+I  LP   R L++L  L ++ N L   P  ++++
Sbjct: 258 LTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPLELIQL 314



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 134/271 (49%), Gaps = 25/271 (9%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS  ++  +P  I  L+ L+ LDL  N++  LP  IG L  L  L+L  NQ+SALP 
Sbjct: 20  TLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSALPP 79

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L  L L  N L++LP+ IG L  L +L +  N LE LP T+    ++  L + 
Sbjct: 80  EIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRLSLS 139

Query: 240 Y-----------------------NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           Y                       N+L  LP  +G++ +L  L + YN +  LP  +  L
Sbjct: 140 YNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPPEIGEL 199

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             L  LDVS+N+L S+P  + F   L  + + NN   L  LP  IG L  L  L++S NQ
Sbjct: 200 YRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNN--QLATLPPEIGFLSNLISLNLSYNQ 257

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +  +P     L++L   R+  N +E  P  I
Sbjct: 258 LTSIPPEIGQLTKLIQFRLSHNKIETLPPEI 288



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/201 (36%), Positives = 108/201 (53%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP ++  L ++  L LS N+  ++P  I GL SL   DL+ N++  LP  IG L SL
Sbjct: 120 LETLPTTLNHLVNINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSL 179

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQ++ LP  +  L RL  LD+  N L SLP  I  LI+L  L +  N L  LP
Sbjct: 180 NQLDLGYNQLTTLPPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLP 239

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG  S+L  L + YN+L ++P  +G++  L    + +N I+ LP  +  L+ L  L +
Sbjct: 240 PEIGFLSNLISLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLML 299

Query: 285 SFNELESVPESLCFATTLVKM 305
             N+L ++P  L       K+
Sbjct: 300 KNNQLLALPLELIQLVQFFKL 320



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 91/185 (49%), Gaps = 2/185 (1%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           + E LDL    L +LP  I  L  L+ L +  N L  LP  IG+   L  L +  N+L A
Sbjct: 17  KAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSA 76

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP  +G+++ L  L + YN +  LP  +  L+ L EL +S N LE++P +L     + ++
Sbjct: 77  LPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFLETLPTTLNHLVNINRL 136

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N     +LP  I  L  L   D++NNQ+  LP     L  L  L +  N L   P 
Sbjct: 137 SLSYN--QFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPP 194

Query: 366 NIVEM 370
            I E+
Sbjct: 195 EIGEL 199


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/237 (38%), Positives = 144/237 (60%), Gaps = 2/237 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           SIG LS+L  L +S N+  +VPA IG L+SL+ L+LH N++  +P  IG L SL +L+L 
Sbjct: 156 SIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLH 215

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           GNQ+++LP  + +L  L  L L  N L+SLP  IG L SL++L +  N L  LP  IGQ 
Sbjct: 216 GNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQL 275

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           +SL  L ++ N+L +LP  +G++ +L  L +  N +  LP  +  L+SL+ L +++N+L 
Sbjct: 276 ASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLT 335

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           SVP  +     L ++ +  N   L ++P  IG L +LE L++ +N++   P + R L
Sbjct: 336 SVPAEIGQLAALRELGLFEN--QLTSVPAEIGQLTLLEGLELRHNRLTSEPAAIREL 390



 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 153/263 (58%), Gaps = 6/263 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+L SLV L L  N++ ++PA IG L SL +L L  N++  LP  IG L+SL  L
Sbjct: 42  VPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEGL 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  L  L+L  N L+S+P+ IG L SL++L +  N L     +I
Sbjct: 102 FLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLT----SI 157

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+LR L V  N+  ++P  +G++ +LEVL + YN +  +P  +  L+SL+ L++  N
Sbjct: 158 GLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGN 217

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T+L  + + +N   L +LP  IG L  LE L + +NQ+  LP     L
Sbjct: 218 QLTSLPAGIGQLTSLTYLFLDDN--RLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQL 275

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L ++ N L   P  I ++
Sbjct: 276 ASLEWLYLEGNQLTSLPAGIGQL 298



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/282 (36%), Positives = 155/282 (54%), Gaps = 21/282 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L SL  L L+ N++ +VPA I  L+SL+ L+L+ N++  +P+ IG L SL  L
Sbjct: 88  LPAEIGQLMSLEGLFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRL 147

Query: 168 DLRGNQISAL-------------------PVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
            L GNQ++++                   P  + +L  LE L+L  N L+S+P  IG L 
Sbjct: 148 FLSGNQLTSIGLLSALRGLGVSGNQRTSVPAEIGQLTSLEVLELHYNQLTSVPAEIGQLA 207

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           SLK L +  N L  LP  IGQ +SL  L +D NRL +LP  +G++ +LE L +R+N +  
Sbjct: 208 SLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLTS 267

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP  +  L+SL  L +  N+L S+P  +   T+L  + +  N   L +LP  IG L  L+
Sbjct: 268 LPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNEN--QLTSLPAEIGQLTSLK 325

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L ++ NQ+  +P     L+ LR L + EN L   P  I ++
Sbjct: 326 ALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQL 367



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 116/212 (54%), Gaps = 23/212 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L+L  N++ +VPA IG L+SLK L+LH N++  LP  IG L SL YL
Sbjct: 176 VPAEIGQLTSLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYL 235

Query: 168 -----------------------DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                                   LR NQ+++LP  + +L  LE L L  N L+SLP  I
Sbjct: 236 FLDDNRLTSLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGI 295

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL  L +  N L  LP  IGQ +SL+ L ++YN+L ++P  +G++  L  L +  N
Sbjct: 296 GQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFEN 355

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  +P  +  L+ L  L++  N L S P ++
Sbjct: 356 QLTSVPAEIGQLTLLEGLELRHNRLTSEPAAI 387



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 76/192 (39%), Positives = 113/192 (58%), Gaps = 3/192 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      + LNL    + +   LP  IG+L+SL  L L +NR+ ++PA IG L+SL++L
Sbjct: 202 EIGQLASLKWLNLHGNQLTS---LPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERL 258

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L SL +L L GNQ+++LP  + +L  L  L L  N L+SLP  I
Sbjct: 259 YLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEI 318

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SLK L +  N L  +P  IGQ ++LREL +  N+L ++P  +G++  LE L +R+N
Sbjct: 319 GQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHN 378

Query: 265 NIKQLPTTMSSL 276
            +   P  +  L
Sbjct: 379 RLTSEPAAIREL 390


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/284 (36%), Positives = 156/284 (54%), Gaps = 25/284 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LD+S N +  +P  IG L SLK+L+L  N +I LP+ IG L +L  L
Sbjct: 191 LPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEEL 250

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  LP  + +L  LE L L  N L +LP  IG+L  L+ L ++ N LE LP+ I
Sbjct: 251 NLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEI 310

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SL+ L +++N+L  LP+ +G +  L  L V  N++  LP  +  L SL+ L++  N
Sbjct: 311 GKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENN 370

Query: 288 ELESVPESLC--------------FAT---------TLVKMNIGNNFADLRALPRSIGNL 324
           +L ++P+ +                AT          L  +N+ NN   L+ LP  IG L
Sbjct: 371 QLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENN--QLKTLPNEIGQL 428

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           E L+ L++ NNQ++ LP+    L  L+VL +  N L   P+ IV
Sbjct: 429 ENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLVTLPQEIV 472



 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/260 (37%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL  L  L+LS NR+  +P  IG L +L++LDL  NR+   P+ I  L  L +L
Sbjct: 53  LPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  +  L +L+ L L +N+L++LP  IG L  LK+L +  N L  LP  I
Sbjct: 113 YLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L +L ++ N+L  LP+ +G++  L+ L V  N++  LP  +  L SL+ L++S N
Sbjct: 173 GKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  +     L ++N+ NN   L  LP+ IG L+ LE L + +NQ+  LP     L
Sbjct: 233 LLITLPNEIGKLQNLEELNLSNN--QLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L  L ++ N LE  P  I
Sbjct: 291 QKLEYLYLKNNHLETLPNEI 310



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDL  NR+   P  I  L  LK L L  N+++ LP  IG L  L +L
Sbjct: 76  LPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHL 135

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N ++ LP  + RL RL+ L L +N+L +LP  IG L +L++L +E N L  LP  I
Sbjct: 136 YLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEI 195

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L V  N L  LP  +GK+ +L+ L++  N +  LP  +  L +L EL++S N
Sbjct: 196 GQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNN 255

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++ +N   L  LP+ IG L+ LE L + NN +  LP+    L
Sbjct: 256 QLITLPQEIGQLQELEWLHLEHN--QLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKL 313

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L ++ N L   P+ I
Sbjct: 314 RSLKRLHLEHNQLITLPQEI 333



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/259 (37%), Positives = 146/259 (56%), Gaps = 5/259 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L LS+N++  +P  IG L  L+ L+L  NR+  LP+ IG L +L  LDL  N+++  P  
Sbjct: 43  LYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNE 102

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL RL+ L L  N L +LP  IG+L  L+ L ++ N L  LP  IG+   L+ L +  
Sbjct: 103 IVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYN 162

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N L  LP+ +GK+  LE L +  N +  LP  +  L +L++LDVS N L ++P  +    
Sbjct: 163 NHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLR 222

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +L ++N+ NN   L  LP  IG L+ LEEL++SNNQ+  LP     L  L  L ++ N L
Sbjct: 223 SLKRLNLSNNL--LITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQL 280

Query: 361 EVPPRNIVEMGAQAVVQYM 379
              P+   E+G    ++Y+
Sbjct: 281 ITLPQ---EIGTLQKLEYL 296



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 147/281 (52%), Gaps = 21/281 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L +N++  +P  IG L +L+ LD+  N +  LP+ IG L SL  L
Sbjct: 168 LPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRL 227

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N +  LP  + +L  LEEL+L +N L +LP  IG L  L+ L +E N L  LP  I
Sbjct: 228 NLSNNLLITLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEI 287

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L +  N L+ LP  +GK+ +L+ L + +N +  LP  + +L +L  LDVS N
Sbjct: 288 GTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNN 347

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
            L ++P  +    +L ++N+ NN                        L  LP  IG LE 
Sbjct: 348 HLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLEN 407

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L++ NNQ++ LP+    L  L+ L ++ N L+  P  I
Sbjct: 408 LQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEI 448



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 155/275 (56%), Gaps = 5/275 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL N L+     LP+ IGKL +L  L+LS N+++ +P  IG L  L+ L
Sbjct: 217 EIGKLRSLKRLNLSNNLLIT---LPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWL 273

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++I LP  IG L  L YL L+ N +  LP  + +L  L+ L L  N L +LP  I
Sbjct: 274 HLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEI 333

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L +L  L V  N L  LP+ IG+  SL+ L ++ N+L  LP+ +GK+  L  L++  N
Sbjct: 334 GTLQNLPSLDVSNNHLVTLPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNN 393

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L++  N+L+++P  +     L  +N+ NN   L+ LP  IG L
Sbjct: 394 QLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENN--QLKTLPNEIGRL 451

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L+ L++  NQ+  LP     L  L++L+++  P
Sbjct: 452 QNLKVLNLGGNQLVTLPQEIVGLKHLQILKLKNIP 486



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 2/169 (1%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++ + + ++ L +  N L  LP+ IG+   L  L +  NRL  LP  +G++  LE L +
Sbjct: 32  EALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELDL 91

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +N +   P  +  L  L+ L ++ N+L ++P+ +     L  + + NN   L  LP  I
Sbjct: 92  FHNRLTTFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNH--LATLPSEI 149

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L+ L+ L + NN +  LP     L  L  L +++N L   P+ I ++
Sbjct: 150 GRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQL 198


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  160 bits (404), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I K  +L  LDLS+N++  +P  IG L +L+ L+L AN +I LP  I  L +L  L
Sbjct: 62  LPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQNLKRL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GN+++ LP  + +L +LE L +  N L+ LP  IG L +LK+L++  N L  LP  I
Sbjct: 122 NLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ      L +  N+L  LP+ + K+  LE + +  N +  LP  +  L  L  L +  N
Sbjct: 182 GQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL ++PE +     L ++N+  N  +L  LP+ IG L+ L+ LD+S+NQ+  +P     L
Sbjct: 242 ELTTLPEEIGQLQNLRQLNLKLN--NLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQL 299

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             LR L +  NPL + P+ I ++
Sbjct: 300 QNLRWLDLSGNPLVILPKEIGQL 322



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/317 (30%), Positives = 173/317 (54%), Gaps = 15/317 (4%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N ++ +P  I  L +LK+L+L  NR+  LP  IG
Sbjct: 77  LSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIG 136

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L +L +  N+++ LP  + +L  L+EL L  N+L++LP+ IG L   ++L +  N 
Sbjct: 137 QLKKLEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQ 196

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP  + +  +L ++ +  NRL +LP+ +G++  L  L +  N +  LP  +  L +L
Sbjct: 197 LTTLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNL 256

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R+L++  N L ++P+ +     L  +++ +N   L ++P+ IG L+ L  LD+S N + +
Sbjct: 257 RQLNLKLNNLTTLPKEIGQLQKLDNLDLSDN--QLTSIPKEIGQLQNLRWLDLSGNPLVI 314

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPR-NIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS 398
           LP     L  L  L ++  P  +P +  I ++   A++ +      KR  +T   +Q+KS
Sbjct: 315 LPKEIGQLKNLYFLAMKGIPDLIPQKEKIRKLVPNAIMDFGEGPKLKR--RTTQSRQRKS 372

Query: 399 WVEMCFFSRSNKRKRNG 415
                     N+R+ +G
Sbjct: 373 ---------QNRRENHG 380



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 113/217 (52%), Gaps = 2/217 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           L ++  + + +  L+L   Q++ LP  + +   L++LDL  N L  LP  IG L +L+ L
Sbjct: 39  LTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVL 98

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N+L  LP  I Q  +L+ L +  NRL  LP+ +G++  LE L V +N +  LP  +
Sbjct: 99  NLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEI 158

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L+EL +  N L ++PE +       ++ + +N   L  LP+ +  L+ LE++ + 
Sbjct: 159 GQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDN--QLTTLPQGLCKLQNLEQIYLH 216

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            N++  LP     L +L  L +  N L   P  I ++
Sbjct: 217 QNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQL 253



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 95/202 (47%), Gaps = 2/202 (0%)

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           G     L  A    + +  L+L    L+ LP  I    +LK+L +  N L+ LP  IGQ 
Sbjct: 33  GQTYRTLTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQL 92

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+ L +  N L  LP+ + ++  L+ L++  N +  LP  +  L  L  L VS N L 
Sbjct: 93  QNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLT 152

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P+ +     L ++ +  N   L  LP  IG L+  E L + +NQ+  LP     L  L
Sbjct: 153 VLPKEIGQLQNLKELLLYGN--SLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNL 210

Query: 351 RVLRVQENPLEVPPRNIVEMGA 372
             + + +N L   P+ I ++G 
Sbjct: 211 EQIYLHQNRLTSLPQEIGQLGK 232



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/87 (39%), Positives = 55/87 (63%), Gaps = 3/87 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL+   ++N+  LP  IG+L  L +LDLS+N++ ++P  IG L +L+ L
Sbjct: 249 EIGQLQNLRQLNLK---LNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWL 305

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRG 171
           DL  N ++ LP  IG L +L +L ++G
Sbjct: 306 DLSGNPLVILPKEIGQLKNLYFLAMKG 332


>gi|308080012|ref|NP_001183644.1| uncharacterized protein LOC100502238 [Zea mays]
 gi|238013634|gb|ACR37852.1| unknown [Zea mays]
 gi|414585564|tpg|DAA36135.1| TPA: leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 148/261 (56%), Gaps = 7/261 (2%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
           KKLD+ +  +  LP     L ++  LDL  N + ++P ++ +RL+ +  LD+ SN L SL
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  LK L V  N L+ELP TI +C +L EL  ++N+L  LP+ +G ++H L  L
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP++ S +++LR LD   N L ++P+ L     L  +N+  NF  LR LP 
Sbjct: 162 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPY 221

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG L  L ELD+S N I  LPDS   L++L       NPL  PP ++VE    A+  Y+
Sbjct: 222 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 281

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +     R   T   K KKSWV
Sbjct: 282 S----ARMNGTAKAK-KKSWV 297



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 4/211 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++ LP     L ++ +LDLS N + ++P +I   L ++  LD+ +N++  LP+SIG L 
Sbjct: 50  SMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLS 109

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLE 221
            L  L++ GN +  LP  +     LEEL+   N L+ LPD++G  L  L++L V +N L 
Sbjct: 110 KLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRLSVNSNKLA 169

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN--NIKQLPTTMSSLSSL 279
            LP +    ++LR L    N L+ALP+ +  +  LE L+V  N   +++LP  +  L SL
Sbjct: 170 YLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPYGIGLLVSL 229

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNN 310
           RELDVS+N + ++P+S+   T L + +   N
Sbjct: 230 RELDVSYNSIAALPDSMGCLTKLARFSAAGN 260



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  LPD +  L  L +L++S+N   +  +P  IG L SL++LD+  N I  LPDS+G L 
Sbjct: 191 LRALPDGLENLGGLEALNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLT 250

Query: 163 SLVYLDLRGNQISALPV 179
            L      GN +   P+
Sbjct: 251 KLARFSAAGNPLVCPPM 267


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 155/276 (56%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  NR+  +P  IG L +L+ L
Sbjct: 87  EIGQLKNLRKLNLHD---NQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N+   +P  IG L +L  L+L  NQ++ALP  + +L  L+ LDLGSN L++LP+ I
Sbjct: 144 KLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L + TN L  LP+ IGQ  +L+EL +  N+L  LP  +G++  L+ L +R N
Sbjct: 204 GQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP+ IG L
Sbjct: 264 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPKEIGQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+  +++NNQ+  LP     L  L+ L + +N L
Sbjct: 322 KNLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 357



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 158/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 64  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKEL 120

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +NR+  LP+ IG L +L  L L  NQ   +P  + +L  L+ L+LG+N L++LP+ I
Sbjct: 121 SLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEI 180

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L + +N L  LP+ IGQ   L++L +  NRL  LP  +G++  L+ L +  N
Sbjct: 181 GQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSN 240

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +  N L ++ + +     L  +++ NN   L   P+ I  L
Sbjct: 241 QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQL 298

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP     L  L+V  +  N L   P+ I ++
Sbjct: 299 KNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 344



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 141/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L +  
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G++  L+ L +  N +  LP  +  L  L++L +S N L ++P  +    
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ +G+N   L  LP  IG L+ L+ L + +N++  L      L  L+ L +  N L
Sbjct: 231 NLQELYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQL 288

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 289 TTFPKEIEQL 298



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 114/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP+ IG+L +L SLDL  NR+  +P  IG L  L+ L
Sbjct: 156 EIGQLKNLQTLNLGN---NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L L SN L++L   I
Sbjct: 213 YLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N L   P  I Q  +L+ L +  N+L  LP+ +G++  L+V  +  N
Sbjct: 273 EQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL +  N+L S
Sbjct: 333 QLTTLPKEIGQLQNLQELYLIDNQLSS 359



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  NRL  LP  +G++  L VL + +N  K +P  
Sbjct: 97  LNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++  N+L ++P  +     L  +++G+N   L  LP  IG L+ L++L +
Sbjct: 157 IGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSN--RLTTLPNEIGQLQKLQDLYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP+    L  L+ L +  N L + P  I ++
Sbjct: 215 STNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQL 252


>gi|351698002|gb|EHB00921.1| Malignant fibrous histiocytoma-amplified sequence 1, partial
           [Heterocephalus glaber]
          Length = 1023

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N +  +PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 112 VSALRELRKLNLSHNHLPCLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHRLRTLDVDH 171

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L ++K L +   +L  LP+   Q +
Sbjct: 172 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRAIKILWLSGAELGTLPNGFCQLA 231

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALPE    +  L++L++  N  ++ P T+  L+ L EL +S N+L S
Sbjct: 232 SLESLMLDNNGLQALPEQFSHLQRLKMLNLSSNLFEEFPATLLPLAGLEELYLSRNQLTS 291

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 292 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 349

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 350 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 390



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ LI+  N    LP  + +    L EL + +NRL 
Sbjct: 46  IEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFARLPPAVAELGHHLTELDLSHNRLT 105

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N++  LP  + +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 106 ALGAEVVSALRELRKLNLSHNHLPCLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHRLR 165

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  +++L +    L   
Sbjct: 166 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRAIKILWLSGAELGTL 223

Query: 364 PRNIVEMGA 372
           P    ++ +
Sbjct: 224 PNGFCQLAS 232


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L V P  + ++
Sbjct: 325 QRLQTLYLGNNQLNVLPNKVEQL 347



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|195613110|gb|ACG28385.1| leucine-rich repeat-containing protein 40 [Zea mays]
          Length = 363

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 148/261 (56%), Gaps = 7/261 (2%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
           KKLD+ +  +  LP     L ++  LDL  N + ++P ++ +RL+ +  LD+ SN L SL
Sbjct: 42  KKLDMSSMSMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 101

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  LK L V  N L+ELP TI +C +L EL  ++N+L  LP+ +G ++H L  L
Sbjct: 102 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP++ S +++LR LD   N L ++P+ L     L  +N+  NF  LR LP 
Sbjct: 162 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPY 221

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG L  L ELD+S N I  LPDS   L++L       NPL  PP ++VE    A+  Y+
Sbjct: 222 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 281

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +     R   T   K KKSWV
Sbjct: 282 S----ARMNGTAKAK-KKSWV 297



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 122/211 (57%), Gaps = 4/211 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++ LP     L ++ +LDLS N + ++P +I   L ++  LD+ +N++  LP+SIG L 
Sbjct: 50  SMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSLPNSIGCLS 109

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLE 221
            L  L++ GN +  LP  +     LEEL+   N L+ LPD++G  L  L++L V +N L 
Sbjct: 110 KLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRLSVNSNKLA 169

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN--NIKQLPTTMSSLSSL 279
            LP +    ++LR L    N L+ALP+ +  +  LE L+V  N   +++LP  +  L SL
Sbjct: 170 YLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLEALNVSQNFQYLRELPYGIGLLVSL 229

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNN 310
           RELDVS+N + ++P+S+   T L + +   N
Sbjct: 230 RELDVSYNSIAALPDSMGCLTKLARFSAAGN 260



 Score = 44.7 bits (104), Expect = 0.097,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  LPD +  L  L +L++S+N   +  +P  IG L SL++LD+  N I  LPDS+G L 
Sbjct: 191 LRALPDGLENLGGLEALNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLT 250

Query: 163 SLVYLDLRGNQISALPV 179
            L      GN +   P+
Sbjct: 251 KLARFSAAGNPLVCPPM 267


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS+N+++ +P  I  L +L+ LDLH+N++I LP  I  L +L  L
Sbjct: 63  LPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQML 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ++ LP  + +L  L+EL L +N L++ P  IG L  L+ L +  N ++ +P  I
Sbjct: 123 DLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ +GK+  L+ L++ YN IK LP  +  L  L+ L +  N
Sbjct: 183 EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  LP+ IG L+ L+ L ++NNQ+  +P     L
Sbjct: 243 QLTTLPQEIEKLQKLESLGLDNN--QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 301 QNLQDLYLVSNQLTTIPKEIGQL 323



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L+L  N+I  LP  I  L 
Sbjct: 173 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQ 232

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 233 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 292

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+ L
Sbjct: 293 IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTL 352

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 353 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 410

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 411 EIGQLQNLQTLYLRNNQFSIEEK 433



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++   P  IG L  L+ L+L AN+I  +P  I  L  L  L
Sbjct: 132 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L+L  N + +LP  I  L  L+ L +  N L  LP  I
Sbjct: 192 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L +D N+L  LP+ +G++  L+VL +  N +  +P  +  L +L++L +  N
Sbjct: 252 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++GNN   L  LP+ IG L+ L+ L +SNNQ+  +P     L
Sbjct: 312 QLTTIPKEIGQLQNLQMLDLGNN--QLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQL 369

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 370 QNLQELYLSNNQLTTIPKEIGQL 392



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 152/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L L N   + +   P  IGKL  L  L+LS N+I  +P  I  L  L+ L
Sbjct: 135 EIGKLQNLQELYLSN---NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L  L +L+L  NQI  LP  + +L +L+ L L  N L++LP  I
Sbjct: 192 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L+ L ++ N L  LP  IGQ  +L+ L ++ N+L  +P+ +G +  L+ L +  N
Sbjct: 252 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L +L+ LD+  N+L  +P+ +     L  + + NN   L  +P+ IG L
Sbjct: 312 QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNN--QLTTIPKEIGQL 369

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +SNNQ+  +P     L  L+ L +  N L   P+ I ++
Sbjct: 370 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 415



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 136/245 (55%), Gaps = 2/245 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++ A+P  IG L +L+ LDL  N++I LP  I  L +L  LDL  NQ+  LP  + 
Sbjct: 55  LSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIR 114

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ LDL SN L+ LP  IG L +L++L +  N L   P  IG+   L+ L +  N+
Sbjct: 115 QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 174

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           +K +P+ + K+  L+ L +  N +  LP  +  L  L+ L++S+N+++++P+ +     L
Sbjct: 175 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKL 234

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + +  N   L  LP+ I  L+ LE L + NNQ+  LP     L  L+VL +  N L  
Sbjct: 235 QWLYLHKN--QLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 292

Query: 363 PPRNI 367
            P+ I
Sbjct: 293 IPQEI 297



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 119/225 (52%), Gaps = 2/225 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L   ++  LP  IG L +L  LDL  NQ+  LP  + +L  L+ LDL SN L  LP  I 
Sbjct: 55  LSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIR 114

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +L+ L + +N L  LP  IG+  +L+EL +  N+L   P+ +GK+  L+ L++  N 
Sbjct: 115 QLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQ 174

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           IK +P  +  L  L+ L +  N+L ++P+ +     L  +N+   +  ++ LP+ I  L+
Sbjct: 175 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLS--YNQIKTLPQEIEKLQ 232

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L+ L +  NQ+  LP     L +L  L +  N L   P+ I ++
Sbjct: 233 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQL 277



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 2/216 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L ++  + L +  L L   ++ ALP  + +L  L+ LDL  N L  LP  I  L +L+
Sbjct: 38  MDLTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L + +N L  LP  I Q  +L+ L +  N+L  LP+ +GK+  L+ L +  N +   P 
Sbjct: 98  MLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L  L+ L++S N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ L+
Sbjct: 158 EIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNN--QLTTLPQEIGKLQKLQWLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +S NQI+ LP     L +L+ L + +N L   P+ I
Sbjct: 216 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 251


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P+ I ++
Sbjct: 325 QRLQTLYLGNNQLNFLPKEIGQL 347



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 155/276 (56%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL +   + +  LP+ I +L  L +L L  N+  ++   IG L +L+ L
Sbjct: 136 EIGQLQNLQELNLAH---NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESL 192

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L L  NQ++ LP  + +L  L+ L L +N L++LP  I
Sbjct: 193 GLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEI 252

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+KL++  N L  LP  IGQ  +L++L++  N+L  LP+ +G++  L+ L +  N
Sbjct: 253 GQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGN 312

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L  L+ L +  N+L  +P+ +     L  +++ +N   L ALP+ IG L
Sbjct: 313 QLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHN--QLNALPKEIGKL 370

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++  NQ+  LP+  + L  L+ L +  NPL
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 115/212 (54%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L++
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP  IGQ  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|297735442|emb|CBI17882.3| unnamed protein product [Vitis vinifera]
          Length = 308

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/249 (41%), Positives = 147/249 (59%), Gaps = 5/249 (2%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           LP+   +L ++  LDL  N +  +P +L+ RL+ +  LD+ SN L SLP+SIG L  LK 
Sbjct: 6   LPNPSLNLAAICKLDLCNNNLQNIPESLTARLLNVVILDVHSNQLKSLPNSIGCLSKLKV 65

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPT 271
           L +  N ++ LP TI  C SL EL  ++N+L  LP+ +G ++  ++ LSV  N +  LP+
Sbjct: 66  LNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFELLNIKKLSVNSNKLMLLPS 125

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           + S L+SL+ LD   N L ++PE L     L  +N+  NF  L  LP SIG L  L ELD
Sbjct: 126 STSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVELD 185

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S N+I  LPDS   L +L+ L V+ NPL  PP  +VE G QAV +Y++   EK  A  +
Sbjct: 186 ASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPMEVVEQGMQAVKEYLS---EKMTAAHR 242

Query: 392 PVKQKKSWV 400
              +KKSW+
Sbjct: 243 CSPKKKSWI 251



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 101/165 (61%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP+SIG LS L  L++S N I  +P TI    SL++L+ + N++  LPD+IG +L
Sbjct: 48  NQLKSLPNSIGCLSKLKVLNISGNLIQNLPKTIENCRSLEELNANFNQLTMLPDTIGFEL 107

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           L++  L +  N++  LP + S L  L+ LD   N L +LP+ + +LI+L+ L V  N   
Sbjct: 108 LNIKKLSVNSNKLMLLPSSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQY 167

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           LE LP++IG   SL EL   YNR+  LP+++G +  L+ L V  N
Sbjct: 168 LETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGN 212



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 24/51 (47%), Positives = 32/51 (62%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP 155
           +E LP SIG L SLV LD S NRI  +P ++G L  L+KL +  N ++  P
Sbjct: 168 LETLPYSIGLLMSLVELDASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPP 218



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKL 144
           SS      L + +  ++ +  LP+ +  L +L  L++S+N   +  +P +IG L SL +L
Sbjct: 125 SSTSHLTSLQVLDARLNCLRALPEDLENLINLQVLNVSQNFQYLETLPYSIGLLMSLVEL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           D   NRI  LPDS+G L  L  L + GN + + P+
Sbjct: 185 DASYNRITTLPDSMGCLKKLQKLCVEGNPLVSPPM 219


>gi|115458964|ref|NP_001053082.1| Os04g0476700 [Oryza sativa Japonica Group]
 gi|113564653|dbj|BAF14996.1| Os04g0476700, partial [Oryza sativa Japonica Group]
          Length = 271

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/204 (45%), Positives = 128/204 (62%), Gaps = 1/204 (0%)

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           +P A+  L  LEEL L SN L SLPDSIG L++L+ L V +N L  LP +I +C SL EL
Sbjct: 2   IPDAIGGLDHLEELRLASNALISLPDSIGLLLNLRILNVGSNRLRSLPDSISKCRSLIEL 61

Query: 237 RVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
              YN L  LP  +G ++  L  L V  N ++ LP+++  + SL  LD  FNEL  +P +
Sbjct: 62  DASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYLLDAHFNELCGLPSA 121

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +   ++L  +N+ +NF+DL+ LP S G+L  L ELD+SNNQI  LPD+F  L +L  L +
Sbjct: 122 IGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALPDNFGRLDKLEKLNL 181

Query: 356 QENPLEVPPRNIVEMGAQAVVQYM 379
           ++NPL +PP  IV  G  AV +YM
Sbjct: 182 EQNPLSMPPMEIVNKGVDAVKEYM 205



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 74/146 (50%), Gaps = 26/146 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPDSI K  SL+ LD S N +  +P  IG  L +L+KL +H N++  LP SI ++ SL  
Sbjct: 48  LPDSISKCRSLIELDASYNGLAYLPTNIGYELVNLRKLWVHMNKLRSLPSSICEMRSLYL 107

Query: 167 LDLRGNQISALPVALSRLVRLE-------------------------ELDLGSNNLSSLP 201
           LD   N++  LP A+ +L  LE                         ELDL +N + +LP
Sbjct: 108 LDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFGDLLNLRELDLSNNQIHALP 167

Query: 202 DSIGSLISLKKLIVETNDLEELPHTI 227
           D+ G L  L+KL +E N L   P  I
Sbjct: 168 DNFGRLDKLEKLNLEQNPLSMPPMEI 193



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/102 (46%), Positives = 63/102 (61%), Gaps = 2/102 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--RIIELPDSIG 159
           M+ +  LP SI ++ SL  LD   N +  +P+ IG LSSL+ L+L +N   + +LP S G
Sbjct: 89  MNKLRSLPSSICEMRSLYLLDAHFNELCGLPSAIGKLSSLEILNLSSNFSDLKDLPASFG 148

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           DLL+L  LDL  NQI ALP    RL +LE+L+L  N LS  P
Sbjct: 149 DLLNLRELDLSNNQIHALPDNFGRLDKLEKLNLEQNPLSMPP 190


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 162/293 (55%), Gaps = 10/293 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------FADLRAL 317
            +K LP  +  L  L +L++  N++ ++P+     T   ++    N       +  L  L
Sbjct: 243 QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATL 302

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           PR IG L+ L+ LD+  NQ+  LP     L  L+ L +  N L + P+ I E+
Sbjct: 303 PREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWEL 355



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 2/222 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDL  NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           LE L+ELD++ NQ++ LP     L +L  L +  N +   P+
Sbjct: 231 LENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPK 272



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 242 NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 301

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 422 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 456

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 457 NNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 96/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I +L +L SL L +  +VA+P  I  L  L+ L L  N++  LP  IG L +L  LD
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 658 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 50/313 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 422 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 481

Query: 288 -------------------ELESVPE-------SLCFATTLVKMNIGNNFA--------- 312
                              +L  V E       +L     L  +++   +          
Sbjct: 482 PLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQFSLFPKEI 541

Query: 313 ----DLRAL----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV-QE 357
               +LR+L          P+ I  L+ LE L +  NQ++ LP    +L  LR L +   
Sbjct: 542 LRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGAN 601

Query: 358 NPLEVPPRNIVEM 370
           N  EV P+ I  +
Sbjct: 602 NEFEVLPKEIARL 614



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 414 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 473

Query: 165 VYLDL----------------------------RGNQISALPVALSRLVRLEELDLGSNN 196
             L+L                             G     L +AL + +++  L L    
Sbjct: 474 EVLNLLINPLLSKERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQQ 533

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 534 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNL 593

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 651

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N ++  P  I  +
Sbjct: 652 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 706



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 103/195 (52%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L   +    P  I  L +L+ L L+   ++ LP  I  L  L +L L  NQ+ +
Sbjct: 523 KILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKS 582

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 583 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 642

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++++PE 
Sbjct: 643 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEE 702

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 703 IARLQNLRKLTLYEN 717



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 658 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 692

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I+ LP+    L  LR L + ENP  +PP+ +
Sbjct: 693 YNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 602 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 661

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N + +LP+ I  L +L+KL +  N
Sbjct: 662 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  159 bits (402), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 162/293 (55%), Gaps = 10/293 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------FADLRAL 317
            +K LP  +  L  L +L++  N++ ++P+     T   ++    N       +  L  L
Sbjct: 243 QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATL 302

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           PR IG L+ L+ LD+  NQ+  LP     L  L+ L +  N L + P+ I E+
Sbjct: 303 PREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWEL 355



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 2/222 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDL  NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           LE L+ELD++ NQ++ LP     L +L  L +  N +   P+
Sbjct: 231 LENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPK 272



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 242 NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 301

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 422 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 456

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 457 NNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I KL +L SL L +  +VA+P  I  L  L++L L  N++  LP  IG L +L  LD
Sbjct: 538 PKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 658 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 15/272 (5%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 422 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 481

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALP--RSIGNLEM-LEE------LDISNNQIR 338
            L S  E       L   NI     DLR +   R+  NL + LE+      L +   Q  
Sbjct: 482 PLLS-EERKKIQALLPNCNI-----DLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFS 535

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + P     L  LR L + +  L   P+ IV +
Sbjct: 536 LFPKEILKLKNLRSLSLYDTSLVALPKEIVRL 567



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 414 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 473

Query: 165 VYLDL----------------------------RGNQISALPVALSRLVRLEELDLGSNN 196
             L+L                             G     L +AL + +++  L L    
Sbjct: 474 EVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQ 533

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 534 FSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 593

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 651

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N ++  P  I  +
Sbjct: 652 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 706



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 538 PKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 658 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 692

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I+ LP+    L  LR L + ENP  +PP+ +
Sbjct: 693 YNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L   +    P  I  L +L+ L L+   ++ LP  I  L  L  L L  NQ+ +
Sbjct: 523 KILSLSLEYQQFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKS 582

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 583 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 642

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++++PE 
Sbjct: 643 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEE 702

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 703 IARLQNLRKLTLYEN 717



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 602 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 661

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N + +LP+ I  L +L+KL +  N
Sbjct: 662 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 160/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L +L LSEN++   P  IG L +L++L
Sbjct: 181 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  LP  IG L +L  L+L  NQ++  P  + +L +L++L LG N L++ P  I
Sbjct: 238 NLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +   IGQ  +L +L + YN+L  LP  +G++  L+ LS+  N
Sbjct: 298 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  LD+  N+L ++P+ +     L  + +G N   L   P+ IG L
Sbjct: 358 QLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN--QLTTFPKEIGQL 415

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           E L+ELD+ NN++  LP     L  L  L + EN L   P+ I ++
Sbjct: 416 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 461



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 166/309 (53%), Gaps = 28/309 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L++   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLRD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L++++N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  L++S N+L + P+ +     L  + +G N   L   P+ IG L
Sbjct: 243 RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRN--QLTTFPKEIGQL 300

Query: 325 EMLEELDI-----------------------SNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           + L+ LD+                       S NQ+  LP     L +L+ L +  N L 
Sbjct: 301 KNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLT 360

Query: 362 VPPRNIVEM 370
             P+ I ++
Sbjct: 361 TLPKEIGQL 369



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L  N++  +P  IG L +L  LDL  N++  LP  IG L +L  L
Sbjct: 339 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 398

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+ELDL +N L++LP  IG L +L+ L +  N L   P  I
Sbjct: 399 GLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 458

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L++L + YNRL  LP+ +G++  L+ L + YN +  LP  +  L +L+ LD+ +N
Sbjct: 459 GQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 518

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + ++V + +     L+++N+  ++  L  LP  IG L+ L  LD+  NQ+  LP     L
Sbjct: 519 QFKTVSKEIGQLKNLLQLNL--SYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQL 576

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L +  N L   P+ I
Sbjct: 577 KNLYNLGLGTNQLTTLPKEI 596



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 157/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L+L +NR+  +P  IG L +L+ L
Sbjct: 135 EIGQLRNLQTLNLQD---NQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L L  NQ++  P  + +L  L+EL+L  N L++LP  I
Sbjct: 192 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L   P  IGQ   L++L +  N+L   P+ +G++  L++L + YN
Sbjct: 252 GQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  LP+ IG L
Sbjct: 312 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN--QLTTLPKEIGQL 369

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L  LD+  NQ+  LP     L  L  L +  N L   P+ I ++
Sbjct: 370 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQL 415



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 149/264 (56%), Gaps = 6/264 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  +DL+L     + +  LP  IG+L +L +LDL  N++  +P  IG 
Sbjct: 335 QLATLPAEIGQLKKLQDLSLGR---NQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQ 391

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L  L L  N++   P  IG L +L  LDL  N+++ALP  + +L  LE L+L  N L
Sbjct: 392 LKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQL 451

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++ P  IG L  L+ L +  N L  LP  IGQ   L++L + YNRL  LP+ +G++  L+
Sbjct: 452 TTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQ 511

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           +L + YN  K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  L
Sbjct: 512 MLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTN--QLTTL 569

Query: 318 PRSIGNLEMLEELDISNNQIRVLP 341
           P+ IG L+ L  L +  NQ+  LP
Sbjct: 570 PKEIGQLKNLYNLGLGTNQLTTLP 593



 Score =  141 bits (355), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  LDL +N++   PA I  L  L+ LDL  NR++ LP+ IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQ 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++   P  + +L  L+ L+L  N L++LP  IG L +L+KL +  N L  
Sbjct: 118 NLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTV 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +  N +   P  +  L +L+EL
Sbjct: 178 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++ +N L ++P+ +     L  + +  N   L   P+ IG L+ L++L +  NQ+   P 
Sbjct: 238 NLKWNRLTALPKEIGQLKNLENLELSEN--QLTTFPKEIGQLKKLQDLGLGRNQLTTFPK 295

Query: 343 SFRMLSRLRVL 353
               L  L++L
Sbjct: 296 EIGQLKNLQML 306



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 5/256 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  +DL L     + +   P  IG+L +L  LDL  N+   V   IG L +L +L
Sbjct: 273 EIGQLKKLQDLGLGR---NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 329

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L  L  L L  NQ++ LP  + +L  L  LDLG+N L++LP  I
Sbjct: 330 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 389

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  L +  N L   P  IGQ  +L+EL +  NRL ALP+ +G++  LE L +  N
Sbjct: 390 GQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN 449

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L  L++L +S+N L  +P+ +     L   ++G ++  L  LP+ IG L
Sbjct: 450 QLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL--QDLGLSYNRLVILPKEIGQL 507

Query: 325 EMLEELDISNNQIRVL 340
           + L+ LD+  NQ + +
Sbjct: 508 KNLQMLDLCYNQFKTV 523



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 119/227 (52%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDLR NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LE L+EL++  N++  LP     L  L  L + EN L   P+ I ++
Sbjct: 231 LENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 277



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/219 (30%), Positives = 118/219 (53%), Gaps = 2/219 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  L+L G   + LP  + +L  L+ELDL  N L++ P  I  L  L+
Sbjct: 38  MDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLE 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L  LP+ IG+  +L+EL +  N+L   P+ +G++  L+ L+++ N +  LP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPV 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L +L++  N L  +P+ +     L  +N+ +N   L  LP  IG L+ L+ L 
Sbjct: 158 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDN--QLATLPVEIGQLQNLQTLG 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +S NQ+   P     L  L+ L ++ N L   P+ I ++
Sbjct: 216 LSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQL 254


>gi|124007588|ref|ZP_01692292.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986886|gb|EAY26651.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 318

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 172/305 (56%), Gaps = 13/305 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  L + IG+L +L  LDLS N + ++P ++G L SL+KLDL  N+  ELP+ IG L 
Sbjct: 19  ENLTALSEKIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEVIGQLT 78

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  +QI++ P ++  L +L  L+L +   + LP +I  + SL+KL VE   L +
Sbjct: 79  SLQRLVLTHSQITSFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVEAGSLTK 138

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+ ++L EL++++N+L +LPE++G +  L+ L +  N +K LP T+  L +L  L
Sbjct: 139 LPKNIGKLTNLIELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELL 198

Query: 283 DV----SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
            +      NEL  +PES+    +L ++++  N   L  LP+SIG L+ L EL +    + 
Sbjct: 199 SLGDFRGTNELTVLPESIGQLKSLRELHLTGN--RLTKLPKSIGQLKSLRELHLMGCGLT 256

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS 398
            LPDS   L  L VL +  N L   P++I ++     + Y    +EK  AK +       
Sbjct: 257 DLPDSIGQLENLEVLYLSGNKLAKLPKSIGKLNRLKKI-YAPKSLEKEKAKIE------K 309

Query: 399 WVEMC 403
           W+  C
Sbjct: 310 WLPNC 314



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 100/185 (54%), Gaps = 2/185 (1%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           R   L L   NL++L + IG L +L+ L +  N L  LP ++G   SL +L +  N+   
Sbjct: 10  RTTTLYLNKENLTALSEKIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTE 69

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPE +G++ +L+ L + ++ I   P ++ +L  L  L++S  +   +P ++   T+L K+
Sbjct: 70  LPEVIGQLTSLQRLVLTHSQITSFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKL 129

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            +      L  LP++IG L  L EL +++NQ+  LP+S   L  L+ L +  N L+  P 
Sbjct: 130 QV--EAGSLTKLPKNIGKLTNLIELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPA 187

Query: 366 NIVEM 370
            I ++
Sbjct: 188 TIGQL 192


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 162/293 (55%), Gaps = 10/293 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------FADLRAL 317
            +K LP  +  L  L +L++  N++ ++P+     T   ++    N       +  L  L
Sbjct: 243 QLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATL 302

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           PR IG L+ L+ LD+  NQ+  LP     L  L+ L +  N L + P+ I E+
Sbjct: 303 PREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWEL 355



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 117/222 (52%), Gaps = 2/222 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDL  NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           LE L+ELD++ NQ++ LP     L +L  L +  N +   P+
Sbjct: 231 LENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPK 272



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 242 NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 301

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 422 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 456

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 457 NNQLKTLPRQMEKLQDLEVLNLLINPL 483



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/180 (37%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I +L +L SL L +  +VA+P  I  L  L++L L  N++  LP  IG L +L  LD
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 658 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 139/272 (51%), Gaps = 15/272 (5%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 302 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 361

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 362 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 421

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 422 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 481

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALP--RSIGNLEM-LEE------LDISNNQIR 338
            L S  E       L   NI     DLR +   R+  NL + LE+      L +   Q  
Sbjct: 482 PLLS-EERKKIQALLPNCNI-----DLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQFS 535

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + P     L  LR L + +  L   P+ IV +
Sbjct: 536 LFPKEILRLKNLRSLSLYDTSLVALPKEIVRL 567



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 414 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 473

Query: 165 VYLDL----------------------------RGNQISALPVALSRLVRLEELDLGSNN 196
             L+L                             G     L +AL + +++  L L    
Sbjct: 474 EVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGRTYRNLNLALEQPLKILSLSLEYQQ 533

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 534 FSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 593

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 594 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 651

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N ++  P  I  +
Sbjct: 652 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 706



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 538 PKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 597

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 598 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 657

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 658 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 692

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I+ LP+    L  LR L + ENP  +PP+ +
Sbjct: 693 YNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 724



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 102/195 (52%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L   +    P  I  L +L+ L L+   ++ LP  I  L  L  L L  NQ+ +
Sbjct: 523 KILSLSLEYQQFSLFPKEILRLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKS 582

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 583 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 642

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++++PE 
Sbjct: 643 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEE 702

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 703 IARLQNLRKLTLYEN 717



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 602 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 661

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N + +LP+ I  L +L+KL +  N
Sbjct: 662 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 717


>gi|242077088|ref|XP_002448480.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
 gi|241939663|gb|EES12808.1| hypothetical protein SORBIDRAFT_06g027760 [Sorghum bicolor]
          Length = 363

 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/261 (39%), Positives = 147/261 (56%), Gaps = 7/261 (2%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
           KKLD+    +  LP     L ++  LDL  N + ++P ++ +RL+ +  LD+ SN L SL
Sbjct: 44  KKLDMSGMCMDTLPHLTTPLGNITTLDLSNNNLQSIPESIIARLLNVVVLDVRSNQLKSL 103

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  LK L V  N L+ELP TI +C +L EL  ++N+L  LP+ +G ++H L  L
Sbjct: 104 PNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGLRRL 163

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP++ S +++LR LD   N L ++P+ L     L  +N+  NF  LR LP 
Sbjct: 164 SVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLETLNVSQNFQYLRELPY 223

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG L  L ELD+S N I  LPDS   L++L       NPL  PP ++VE    A+  Y+
Sbjct: 224 GIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGNPLVCPPMDVVEQSLDAMRAYL 283

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +     R   T   K KKSWV
Sbjct: 284 S----ARMNGTAKAK-KKSWV 299



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/222 (34%), Positives = 126/222 (56%), Gaps = 7/222 (3%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRI 151
           + L++    MD +  L   +G +++L   DLS N + ++P +I   L ++  LD+ +N++
Sbjct: 44  KKLDMSGMCMDTLPHLTTPLGNITTL---DLSNNNLQSIPESIIARLLNVVVLDVRSNQL 100

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISL 210
             LP+SIG L  L  L++ GN +  LP  +     LEEL+   N L+ LPD++G  L  L
Sbjct: 101 KSLPNSIGCLSKLKVLNVSGNLLQELPATIEECRALEELNANFNQLTRLPDTLGFELHGL 160

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN--NIKQ 268
           ++L V +N L  LP +    ++LR L    N L+ALP+ +  +  LE L+V  N   +++
Sbjct: 161 RRLSVNSNKLAYLPSSTSHMTALRSLDARLNCLRALPDGLENLGGLETLNVSQNFQYLRE 220

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           LP  +  L SLRELDVS+N + ++P+S+   T L + +   N
Sbjct: 221 LPYGIGLLVSLRELDVSYNSIAALPDSMGCLTKLARFSAAGN 262



 Score = 44.7 bits (104), Expect = 0.085,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  LPD +  L  L +L++S+N   +  +P  IG L SL++LD+  N I  LPDS+G L 
Sbjct: 193 LRALPDGLENLGGLETLNVSQNFQYLRELPYGIGLLVSLRELDVSYNSIAALPDSMGCLT 252

Query: 163 SLVYLDLRGNQISALPV 179
            L      GN +   P+
Sbjct: 253 KLARFSAAGNPLVCPPM 269


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 148/252 (58%), Gaps = 2/252 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L LS N++   P  IG L +L++L L  N++  LP+ IG L  L  L
Sbjct: 103 LPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERL 162

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  L   +  L  L+ LDL  N L++LP  IG L +L++L +  N L+ LP+ I
Sbjct: 163 SLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDI 222

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+LK LP+ +G++  L+ L +  N +K LP  +  L +L  LD+  N
Sbjct: 223 GELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHIN 282

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL+++P+ +     L  +++ NN  +L+ LP+ IG L+ L  LD+ NN+++ LP+    L
Sbjct: 283 ELKTLPKEIGELQNLTVLDLRNN--ELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKL 340

Query: 348 SRLRVLRVQENP 359
             LR L + + P
Sbjct: 341 KELRKLHLDDIP 352



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/283 (35%), Positives = 160/283 (56%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL     + +  LP+ IGKL +L  L+L +N+  A+P  IG L +L++L
Sbjct: 60  EIGELQNLRILNL---YRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQEL 116

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++   P+ IG L +L  L L  NQ++ LP  + +L +LE L L  N L +L   I
Sbjct: 117 HLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEI 176

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  LP  IG+  +LREL +  N+LK LP  +G++  L+VL +  N
Sbjct: 177 GYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSN 236

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K LP  +  L +L+EL +  N+L+++P+ +     L  +++  +  +L+ LP+ IG L
Sbjct: 237 QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDL--HINELKTLPKEIGEL 294

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L  LD+ NN+++ LP     L  L VL ++ N L+  P  I
Sbjct: 295 QNLTVLDLRNNELKTLPKEIGELQSLTVLDLRNNELKTLPNEI 337



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/256 (36%), Positives = 148/256 (57%), Gaps = 2/256 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS  R+  +P  IG L +L+ L+L+ N++  LP+ IG L +L  L+L  NQ +ALP  
Sbjct: 47  LDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQFTALPND 106

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL L  N L++ P+ IG L +L++L +  N L  LP+ IG+   L  L +  
Sbjct: 107 IGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQKLERLSLIE 166

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+LK L + +G +  L+VL +  N +  LP  +  L +LREL +  N+L+++P  +    
Sbjct: 167 NQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELK 226

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  ++IG+N   L+ LP+ IG L+ L+EL +  NQ++ LP     L  L VL +  N L
Sbjct: 227 NLQVLHIGSN--QLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINEL 284

Query: 361 EVPPRNIVEMGAQAVV 376
           +  P+ I E+    V+
Sbjct: 285 KTLPKEIGELQNLTVL 300



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 79/206 (38%), Positives = 120/206 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP+ IGKL  L  L L EN++  +   IG L  L+ LDL+ N++  LP  IG+L
Sbjct: 143 VNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGEL 202

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  NQ+  LP  +  L  L+ L +GSN L +LP  IG L +L++L + TN L+
Sbjct: 203 KNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLK 262

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L  L +  N LK LP+ +G++  L VL +R N +K LP  +  L SL  
Sbjct: 263 TLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSLTV 322

Query: 282 LDVSFNELESVPESLCFATTLVKMNI 307
           LD+  NEL+++P  +     L K+++
Sbjct: 323 LDLRNNELKTLPNEIGKLKELRKLHL 348


>gi|148703508|gb|EDL35455.1| mCG19212, isoform CRA_b [Mus musculus]
          Length = 1046

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 127 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 187 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELA 246

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 247 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 306

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 307 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 364

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 365 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 405



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 61  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 120

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 121 ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 180

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A P+ +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 181 TLDVDHN--QLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 364 PRNIVEMGA 372
           PR   E+ +
Sbjct: 239 PRGFCELAS 247


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 158/265 (59%), Gaps = 4/265 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L +N++ +VPA IG L +L+ L LH N++  +P  +G L SL  L
Sbjct: 510 VPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKL 569

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL+ NQ++++PV + +L  L  L+LG+N L+S+P  IG L SL +L +  N+L  +P  I
Sbjct: 570 DLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEI 629

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q +SLREL +  N+L ++P  +G++ +L+ L +  N +  +P  +  L+SL  LD+  N
Sbjct: 630 WQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDN 689

Query: 288 ELESVPESLCFA-TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV-LPDSFR 345
           +L SVP  +    T+L  + +G+N   L + P  IG L  L+EL +  N++   +P    
Sbjct: 690 KLTSVPADILQQLTSLESLELGDNH--LTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIG 747

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L+ L+ L ++ N L   P  I ++
Sbjct: 748 QLTSLKTLDLRCNQLTSVPAEIGQL 772



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 165/299 (55%), Gaps = 28/299 (9%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L N  + ++   P  IG+L+SL+SL L +N++ +VPA IG L+++ +L L+AN++  L
Sbjct: 362 LDLNNNQLTSV---PAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSL 418

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS---------------- 198
           P  I  L  L  L L GNQ++++P  + +L  L EL+L SN L+                
Sbjct: 419 PAEIWQLTPLTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFG 478

Query: 199 -------SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
                  S+P  IG L SL++  +  N L  +P  IG+ +SL  L ++ N+L ++P  +G
Sbjct: 479 LSGNQLTSVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIG 538

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  LE L +  N +  +P  +  L+SL +LD+  N+L SVP  +   T+L+ +N+GNN 
Sbjct: 539 RLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNN- 597

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L ++P  IG L  L EL + +N++  +P     L+ LR L +  N L   P  I ++
Sbjct: 598 -RLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIGQL 655



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/264 (36%), Positives = 146/264 (55%), Gaps = 5/264 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L SL  L L  N++ +VPA I  L+SLK LDL+ N++  +P  IG L SL+ L
Sbjct: 326 LPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISL 385

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++++P  + +L  + EL L +N L+SLP  I  L  L +L +  N L  +P  I
Sbjct: 386 HLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEI 445

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL EL +  N+L  +P  +G++ +     +  N +  +P  +  L+SL E  +S N
Sbjct: 446 GQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTSLEEFGLSGN 505

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L ++ + +N   L ++P  IG L  LE L +  NQ+  +P     L
Sbjct: 506 QLTSVPAEIGRLTSLERLWLEDN--KLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQL 563

Query: 348 SRLRVLRVQENPLEVPPRNIVEMG 371
           + L  L +Q N L   P   VE+G
Sbjct: 564 TSLEKLDLQHNQLTSVP---VEVG 584



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 151/286 (52%), Gaps = 21/286 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+L++L  L +  N + +VPA IG L+SL++L L  NR+  +P+ IG L ++  L
Sbjct: 257 VPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTEL 316

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LPV + +L  LE L LG N L+S+P  I  L SLK L +  N L  +P  I
Sbjct: 317 YLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEI 376

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N+L ++P  +G++  +  L +  N +  LP  +  L+ L EL +  N
Sbjct: 377 GQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGN 436

Query: 288 ELESVPESLCFATTLVKMNIGNN-----------------FA----DLRALPRSIGNLEM 326
           +L SVP  +    +L ++N+ +N                 F      L ++P  IG L  
Sbjct: 437 QLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLSGNQLTSVPAEIGQLTS 496

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LEE  +S NQ+  +P     L+ L  L +++N L   P  I  + A
Sbjct: 497 LEEFGLSGNQLTSVPAEIGRLTSLERLWLEDNKLTSVPAEIGRLRA 542



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 72/172 (41%), Positives = 114/172 (66%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            LP  IG+L+SL  L L+EN++ +VPA IG L+SL++L L+ N++  +P  IG L +L  L
Sbjct: 913  LPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALARL 972

Query: 168  DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +LR NQ+++LP  + +L  LE+L L SN L+S+P  IG L SLK L +  N L  +P  I
Sbjct: 973  ELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSDNMLTSVPADI 1032

Query: 228  GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
            GQ +SL+ELR+  N+L ++PE +G++ +L+ L +  N +  +P  +  L ++
Sbjct: 1033 GQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAAIRELRAV 1084



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 73/192 (38%), Positives = 116/192 (60%), Gaps = 2/192 (1%)

Query: 130  AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
            AVPA +G LS+L+ L LH N++  LP  IG L SL  L L  NQ++++P  + +L  L E
Sbjct: 889  AVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRE 948

Query: 190  LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
            L L  N L+S+P  IG L +L +L +  N L  LP  IGQ ++L +L +D N+L ++P  
Sbjct: 949  LYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAE 1008

Query: 250  VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
            +G++ +L+ L +  N +  +P  +  L+SL+EL +  N+L SVPE +   T+L  + +  
Sbjct: 1009 IGQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQ 1068

Query: 310  NFADLRALPRSI 321
            N   L ++P +I
Sbjct: 1069 N--RLTSVPAAI 1078



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 144/254 (56%), Gaps = 3/254 (1%)

Query: 118 LVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +V L+L+E  +  AVPA +G L++L++L +  N +  +P  IG L SL  L L GN++++
Sbjct: 243 VVQLELNEFGLTGAVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTS 302

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           +P  + +L  + EL L +N L+SLP  IG L SL+ L +  N L  +P  I Q +SL+ L
Sbjct: 303 VPEEIGQLTAMTELYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCL 362

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            ++ N+L ++P  +G++ +L  L +  N +  +P  +  L+++ EL ++ N+L S+P  +
Sbjct: 363 DLNNNQLTSVPAEIGQLTSLISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEI 422

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
              T L ++ +  N   L ++P  IG L  L EL++S+NQ+  +P     L   R   + 
Sbjct: 423 WQLTPLTELYLYGN--QLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIGQLRSRREFGLS 480

Query: 357 ENPLEVPPRNIVEM 370
            N L   P  I ++
Sbjct: 481 GNQLTSVPAEIGQL 494



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 99/320 (30%), Positives = 169/320 (52%), Gaps = 39/320 (12%)

Query: 85   EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
            E+      ++L L+ NKL  ++   P  IG+L+SL +LDL  N++ +VPA IG L+SL+ 
Sbjct: 721  EIGQLTSLKELTLRGNKLTTSV---PAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRW 777

Query: 144  LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL------VRLEE---LDLGS 194
            L L+ NR+  +P  +G L SL  L L+GNQ++ +P  +  L      V L++   +D G 
Sbjct: 778  LWLNDNRLTSVPAELGQLTSLEGLWLKGNQLTIVPAEIRELKAAGCRVDLDDGVTMDEGD 837

Query: 195  NN------LSSLPDSIGSLIS------LKKLIVETN------DLE------ELPHTIGQC 230
            +        +  PD  G            ++ +E +      +LE       +P  +G+ 
Sbjct: 838  DARALRTWRAMCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRL 897

Query: 231  SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            S+LR L +  N++ +LP  +G++ +LEVL +  N +  +P  +  L+SLREL +  N+L 
Sbjct: 898  SALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLT 957

Query: 291  SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            SVP  +   T L ++ + +N   L +LP  IG L  LE+L + +NQ+  +P     L+ L
Sbjct: 958  SVPAEIGQLTALARLELRDN--QLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIGQLTSL 1015

Query: 351  RVLRVQENPLEVPPRNIVEM 370
            + L + +N L   P +I ++
Sbjct: 1016 KTLGLSDNMLTSVPADIGQL 1035



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 116/189 (61%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            +P  +G+LS+L  L L  N++ ++PA IG L+SL+ L L  N++  +P  IG L SL  L
Sbjct: 890  VPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLREL 949

Query: 168  DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
             L  NQ++++P  + +L  L  L+L  N L+SLP  IG L +L+KL +++N L  +P  I
Sbjct: 950  YLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEI 1009

Query: 228  GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            GQ +SL+ L +  N L ++P  +G++ +L+ L +  N +  +P  +  L+SL+ L +  N
Sbjct: 1010 GQLTSLKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQN 1069

Query: 288  ELESVPESL 296
             L SVP ++
Sbjct: 1070 RLTSVPAAI 1078



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 150/305 (49%), Gaps = 43/305 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +P  IG+L+SL +LDL +N++ +VPA I   L+SL+ L+L  N +   P+ IG L SL  
Sbjct: 671 VPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKE 730

Query: 167 LDLRGNQIS-ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           L LRGN+++ ++P  + +L  L+ LDL  N L+S+P  IG L SL+ L +  N L  +P 
Sbjct: 731 LTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPA 790

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-----------NIKQLPT--- 271
            +GQ +SL  L +  N+L  +P    +I  L+    R +           + + L T   
Sbjct: 791 ELGQLTSLEGLWLKGNQLTIVP---AEIRELKAAGCRVDLDDGVTMDEGDDARALRTWRA 847

Query: 272 ---------------------TMSSLSSLRELDVS-FNELESVPESLCFATTLVKMNIGN 309
                                TM +   + +L++  F    +VP  L   + L  +++  
Sbjct: 848 MCPDLQGMWPEDEQPEDWYRVTMENDGRVVQLELEVFGLTGAVPAELGRLSALRWLSLHG 907

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   + +LP  IG L  LE L ++ NQ+  +P     L+ LR L + EN L   P  I +
Sbjct: 908 N--QVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQ 965

Query: 370 MGAQA 374
           + A A
Sbjct: 966 LTALA 970


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 160/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L +L LSEN++   P  IG L +L++L
Sbjct: 183 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 239

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  LP  IG L +L  L+L  NQ++  P  + +L +L++L LG N L++ P  I
Sbjct: 240 NLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEI 299

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +   IGQ  +L +L + YN+L  LP  +G++  L+ LS+  N
Sbjct: 300 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 359

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  LD+  N+L ++P+ +     L  + +G N   L   P+ IG L
Sbjct: 360 QLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN--QLATFPKEIGQL 417

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           E L+ELD+ NN++  LP     L  L  L + EN L   P+ I ++
Sbjct: 418 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 463



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/294 (33%), Positives = 158/294 (53%), Gaps = 26/294 (8%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +   P  I +L  L SLDLSENR+V +P  IG L +L++L L+ N++I  P  IG
Sbjct: 80  LRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIG 139

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  IG L +L+ L ++ N 
Sbjct: 140 QLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQ 199

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L++++N +  LP  +  L +L
Sbjct: 200 LATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNL 259

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI------- 332
             L++S N+L + P+ +     L  + +G N   L   P+ IG L+ L+ LD+       
Sbjct: 260 ENLELSENQLTTFPKEIGQLKKLQDLGLGRN--QLTTFPKEIGQLKNLQMLDLCYNQFKT 317

Query: 333 ----------------SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                           S NQ+  LP     L +L+ L +  N L   P+ I ++
Sbjct: 318 VSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQL 371



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L  N++  +P  IG L +L  LDL  N++  LP  IG L +L  L
Sbjct: 341 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 400

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+ELDL +N L++LP  IG L +L+ L +  N L   P  I
Sbjct: 401 GLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L++L + YNRL  LP+ +G++  L+ L + YN +  LP  +  L +L+ LD+ +N
Sbjct: 461 GQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 520

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + ++V + +     L+++N+  ++  L  LP  IG L+ L  LD+  NQ+  LP     L
Sbjct: 521 QFKTVSKEIGQLKNLLQLNL--SYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQL 578

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L +  N L   P+ I
Sbjct: 579 KNLYNLGLGTNQLTTLPKEI 598



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 157/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L+L +NR+  +P  IG L +L+ L
Sbjct: 137 EIGQLRNLQTLNLQD---NQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTL 193

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L L  NQ++  P  + +L  L+EL+L  N L++LP  I
Sbjct: 194 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI 253

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L   P  IGQ   L++L +  N+L   P+ +G++  L++L + YN
Sbjct: 254 GQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 313

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  LP+ IG L
Sbjct: 314 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN--QLTTLPKEIGQL 371

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L  LD+  NQ+  LP     L  L  L +  N L   P+ I ++
Sbjct: 372 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQL 417



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 149/264 (56%), Gaps = 6/264 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  +DL+L     + +  LP  IG+L +L +LDL  N++  +P  IG 
Sbjct: 337 QLATLPAEIGQLKKLQDLSLGR---NQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQ 393

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L  L L  N++   P  IG L +L  LDL  N+++ALP  + +L  LE L+L  N L
Sbjct: 394 LKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQL 453

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++ P  IG L  L+ L +  N L  LP  IGQ   L++L + YNRL  LP+ +G++  L+
Sbjct: 454 TTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQ 513

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           +L + YN  K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  L
Sbjct: 514 MLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTN--QLTTL 571

Query: 318 PRSIGNLEMLEELDISNNQIRVLP 341
           P+ IG L+ L  L +  NQ+  LP
Sbjct: 572 PKEIGQLKNLYNLGLGTNQLTTLP 595



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  LDL +N++   PA I  L  L+ LDL  NR++ LP+ IG L 
Sbjct: 60  QNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQ 119

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++   P  + +L  L+ L+L  N L++LP  IG L +L+KL +  N L  
Sbjct: 120 NLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTV 179

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +  N +   P  +  L +L+EL
Sbjct: 180 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 239

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++ +N L ++P+ +     L  + +  N   L   P+ IG L+ L++L +  NQ+   P 
Sbjct: 240 NLKWNRLTALPKEIGQLKNLENLELSEN--QLTTFPKEIGQLKKLQDLGLGRNQLTTFPK 297

Query: 343 SFRMLSRLRVL 353
               L  L++L
Sbjct: 298 EIGQLKNLQML 308



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/256 (35%), Positives = 138/256 (53%), Gaps = 5/256 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  +DL L     + +   P  IG+L +L  LDL  N+   V   IG L +L +L
Sbjct: 275 EIGQLKKLQDLGLGR---NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 331

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L  L  L L  NQ++ LP  + +L  L  LDLG+N L++LP  I
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 391

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  L +  N L   P  IGQ  +L+EL +  NRL ALP+ +G++  LE L +  N
Sbjct: 392 GQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN 451

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L  L++L +S+N L  +P+ +     L   ++G ++  L  LP+ IG L
Sbjct: 452 QLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL--QDLGLSYNRLVILPKEIGQL 509

Query: 325 EMLEELDISNNQIRVL 340
           + L+ LD+  NQ + +
Sbjct: 510 KNLQMLDLCYNQFKTV 525


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  159 bits (401), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/301 (36%), Positives = 169/301 (56%), Gaps = 8/301 (2%)

Query: 73  EKLSLI--KLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV 129
           EKL+L+  +L+ L+ E+ + +    L+L+N   + +E LP+ IGKL  L  L+L  N++ 
Sbjct: 64  EKLNLVNNQLSVLVQEIGTLQKLEWLSLKN---NRLESLPNKIGKLRKLEHLNLENNQLA 120

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
            +   IG L  L+ L L  NR+  LP+ IG L  L +L+L  NQ++ L   +  L +LE 
Sbjct: 121 VLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEW 180

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L L +N L SLP+ IG L  L+ L +E N L  L   IG    L  L ++ N+L  LP+ 
Sbjct: 181 LSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQE 240

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +GK+  LEVL ++ N +  LP  + +L  LR L +  N L+++P  +     L  + +G+
Sbjct: 241 IGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGD 300

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N    R LP+ I  L+ LE LD+SNNQ+  LP+    L  L+ L + +N L V P+ I +
Sbjct: 301 N--QFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQ 358

Query: 370 M 370
           +
Sbjct: 359 L 359



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 144/250 (57%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS+N++  +P  IG L +L+KL+L  N++  L   IG L  L +L L+ N++ +LP  
Sbjct: 43  LDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNK 102

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L +LE L+L +N L+ L   IG+L  L+ L ++ N LE LP+ IG+   L  L +++
Sbjct: 103 IGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEH 162

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  L + +G +  LE LS++ N ++ LP  +  L  L  L++  N+L  + + +    
Sbjct: 163 NQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQ 222

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ NN   L  LP+ IG L+ LE L + NN++  LP     L RLR L +  N L
Sbjct: 223 KLEWLSLENN--QLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRL 280

Query: 361 EVPPRNIVEM 370
           +  PR I ++
Sbjct: 281 KTLPREIWKL 290



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 147/276 (53%), Gaps = 8/276 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG L  L  L L  NR+ ++P  IG L  L+ L+L  N++  L   IG L  L +L
Sbjct: 168 LVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWL 227

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +LE L L +N L SLP  IG+L  L+ L +  N L+ LP  I
Sbjct: 228 SLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREI 287

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L++L +  N+ + LP+ + ++  LE L V  N +  LP  +  L +L+ L +  N
Sbjct: 288 WKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDN 347

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  + + NN   L  LP+ IG L+ L+ L++SNNQ+R LP     L
Sbjct: 348 QLTVLPQEIGQLENLESLILSNN--QLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTL 405

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
             L  L ++ N L   P+ I ++      Q + DL+
Sbjct: 406 QELEWLNLEHNQLAALPQEIDQL------QNLEDLI 435



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 144/284 (50%), Gaps = 25/284 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  L L  N++ ++P  IG L  L+ L L  NR+  LP  I  L +L  L
Sbjct: 237 LPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDL 296

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD-----------------------SI 204
            L  NQ   LP  + +L  LE LD+ +N L +LP+                        I
Sbjct: 297 YLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEI 356

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ LI+  N L  LP  IG    L+ L +  N+L+ LP+ +G +  LE L++ +N
Sbjct: 357 GQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHN 416

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L +L +S N L+++P+ +     L  + + NN   L +LP+ I  L
Sbjct: 417 QLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNN--KLGSLPKEIDQL 474

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           + LE LD+SNNQ+R LP+    L  L  L +  NP    P+ IV
Sbjct: 475 QNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNPFATFPKEIV 518



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG L  L  L L  N++  +P  IG L  L+ L L  N++  LP  IG L  L +L
Sbjct: 214 LVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFL 273

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++  LP  + +L  L++L LG N   +LP  I  L +L+ L V  N L  LP+ I
Sbjct: 274 SLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEI 333

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L +D N+L  LP+ +G++  LE L +  N +  LP  + +L  L+ L++S N
Sbjct: 334 WKLQNLKWLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNN 393

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L ALP+ I  L+ LE+L +SNN+++ LP     L
Sbjct: 394 QLRTLPQEIGTLQELEWLNLEHN--QLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKL 451

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L  L ++ N L   P+ I ++
Sbjct: 452 RKLEWLYLKNNKLGSLPKEIDQL 474



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/293 (34%), Positives = 154/293 (52%), Gaps = 6/293 (2%)

Query: 79  KLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA L+ E+ + +    L+L+N   + +E LP+ IGKL  L  L+L  N++  +   IG 
Sbjct: 164 QLAVLVQEIGTLQKLEWLSLKN---NRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGT 220

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L  L+ L L  N++  LP  IG L  L  L L+ N++ +LP  +  L RL  L L +N L
Sbjct: 221 LQKLEWLSLENNQLTVLPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRL 280

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
            +LP  I  L +LK L +  N    LP  I Q  +L  L V  N+L  LP  + K+  L+
Sbjct: 281 KTLPREIWKLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLK 340

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +L  L +S N+L ++P+ +     L  +N+ NN   LR L
Sbjct: 341 WLYLDDNQLTVLPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNN--QLRTL 398

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ LE L++ +NQ+  LP     L  L  L +  N L+  P+ I ++
Sbjct: 399 PQEIGTLQELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKL 451



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 129/235 (54%), Gaps = 3/235 (1%)

Query: 143 KLDLHANRII-ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K D   N++  +  D++ + +++  LDL  NQ++ LP  + +L  LE+L+L +N LS L 
Sbjct: 18  KRDAEKNKVYHDFSDALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLV 77

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
             IG+L  L+ L ++ N LE LP+ IG+   L  L ++ N+L  L + +G +  LE LS+
Sbjct: 78  QEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSL 137

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           + N ++ LP  +  L  L  L++  N+L  + + +     L  +++ NN   L +LP  I
Sbjct: 138 KNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNN--RLESLPNKI 195

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           G L  LE L++ +NQ+ VL      L +L  L ++ N L V P+ I ++    V+
Sbjct: 196 GKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEVL 250


>gi|357165652|ref|XP_003580452.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Brachypodium
           distachyon]
          Length = 365

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/261 (38%), Positives = 147/261 (56%), Gaps = 5/261 (1%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA-LSRLVRLEELDLGSNNLSSL 200
           KKLD+    +  LP     L  +  LDL  N + ++P + ++RL+ +  LD+ SN L SL
Sbjct: 41  KKLDMSGMSMDTLPHITMSLGHITTLDLSNNNLESIPESVIARLLNVVVLDVRSNQLKSL 100

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  L+ L V  N LE LP TI +C +L EL  ++N+L  LP+ +G ++H+L  L
Sbjct: 101 PNSIGCLSKLRVLNVSGNLLESLPATIEECRALEELNANFNQLTRLPDTLGFELHSLRKL 160

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP + S +++LR LD   N + ++P+ L     L  +N+  NF  LR LP 
Sbjct: 161 SVNSNKLASLPFSTSHMTALRALDARLNCIRALPDGLENLINLEVLNVSQNFHFLRELPY 220

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++G L  L ELD+S N I VLPDS   L++L       NPL  PP +IVE    A+  Y+
Sbjct: 221 AVGLLTSLRELDVSYNSISVLPDSMGCLTKLAKFSAVGNPLVCPPMDIVEQSLDAMRAYL 280

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +    + +      K+KK WV
Sbjct: 281 S---SRMNGTGVNAKKKKGWV 298



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 36/104 (34%), Positives = 55/104 (52%), Gaps = 6/104 (5%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR--IVAVPATI 135
           KLASL    S     R L+ +   ++ I  LPD +  L +L  L++S+N   +  +P  +
Sbjct: 166 KLASLPFSTSHMTALRALDAR---LNCIRALPDGLENLINLEVLNVSQNFHFLRELPYAV 222

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           G L+SL++LD+  N I  LPDS+G L  L      GN +   P+
Sbjct: 223 GLLTSLRELDVSYNSISVLPDSMGCLTKLAKFSAVGNPLVCPPM 266


>gi|302794859|ref|XP_002979193.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
 gi|302821302|ref|XP_002992314.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300139857|gb|EFJ06590.1| hypothetical protein SELMODRAFT_135145 [Selaginella moellendorffii]
 gi|300152961|gb|EFJ19601.1| hypothetical protein SELMODRAFT_110183 [Selaginella moellendorffii]
          Length = 437

 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 102/239 (42%), Positives = 153/239 (64%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           KL L + R+  LP+S+G + SL  ++L  N + ALP +LS+L  L  LD+ SN L++LPD
Sbjct: 133 KLLLSSRRVACLPESLGRIKSLSLINLSTNCLEALPDSLSQLSNLITLDVSSNQLTTLPD 192

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SI SL  L+ L V  N L+ LP ++  C SL EL   +N+L+ LP  +G +  LE LS++
Sbjct: 193 SIRSLKKLRFLNVSGNALKSLPDSLALCFSLVELNASFNQLEKLPPNIGSLFNLEKLSLQ 252

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N +  LP ++  L+SL+ L++ FN+L ++P S+     L  +N  +NF  L  +P S+G
Sbjct: 253 LNKLSMLPASIGDLTSLKVLEIHFNKLVALPSSIGNLKDLEVLNCSSNFNSLTTVPSSLG 312

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           +L  L ELD+S NQIR LP SF  L +LR L++ +NPL VPP  +V+   +AV++YMA+
Sbjct: 313 DLYCLRELDLSYNQIRELPLSFGRLQKLRKLKLDQNPLVVPPPEVVDHSLEAVLEYMAE 371



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 160/297 (53%), Gaps = 13/297 (4%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  LP+S+G++ SL  ++LS N + A+P ++  LS+L  LD+ +N++  LPDSI  L  L
Sbjct: 141 VACLPESLGRIKSLSLINLSTNCLEALPDSLSQLSNLITLDVSSNQLTTLPDSIRSLKKL 200

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +L++ GN + +LP +L+    L EL+   N L  LP +IGSL +L+KL ++ N L  LP
Sbjct: 201 RFLNVSGNALKSLPDSLALCFSLVELNASFNQLEKLPPNIGSLFNLEKLSLQLNKLSMLP 260

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL--SVRYNNIKQLPTTMSSLSSLREL 282
            +IG  +SL+ L + +N+L ALP ++G +  LEVL  S  +N++  +P+++  L  LREL
Sbjct: 261 ASIGDLTSLKVLEIHFNKLVALPSSIGNLKDLEVLNCSSNFNSLTTVPSSLGDLYCLREL 320

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S+N++  +P S      L K+ +  N   +        +LE +         +  + +
Sbjct: 321 DLSYNQIRELPLSFGRLQKLRKLKLDQNPLVVPPPEVVDHSLEAV---------LEYMAE 371

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSW 399
            +R  S +++    +      P  +V  G   V+ ++  +        +P  +  SW
Sbjct: 372 KWR--SSMKLDDEHDRAGSNTPARVVTNGGSRVISWLGGMCAAGTEFRRPSSKVLSW 426



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 95/158 (60%), Gaps = 5/158 (3%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           + S K  R LN+    + +   LPDS+    SLV L+ S N++  +P  IG L +L+KL 
Sbjct: 194 IRSLKKLRFLNVSGNALKS---LPDSLALCFSLVELNASFNQLEKLPPNIGSLFNLEKLS 250

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS--NNLSSLPDS 203
           L  N++  LP SIGDL SL  L++  N++ ALP ++  L  LE L+  S  N+L+++P S
Sbjct: 251 LQLNKLSMLPASIGDLTSLKVLEIHFNKLVALPSSIGNLKDLEVLNCSSNFNSLTTVPSS 310

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           +G L  L++L +  N + ELP + G+   LR+L++D N
Sbjct: 311 LGDLYCLRELDLSYNQIRELPLSFGRLQKLRKLKLDQN 348


>gi|74205668|dbj|BAE21119.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 55  VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 114

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 115 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELA 174

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 175 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 234

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 235 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 292

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 293 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 333



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)

Query: 153 ELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLISL 210
           ++P+ +G  L SL  L LR N+ + LP A++ L   L ELD+  N L+ L   + S +  
Sbjct: 1   DVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALR- 59

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
                                 LR+L + +N+L ALP  +G +  LE L V +N +  LP
Sbjct: 60  ---------------------ELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLP 98

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            + S L+ LR LDV  N+L + P+ L     L ++++ +N   LR LP  I  L  L+ L
Sbjct: 99  DSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSN--RLRGLPEDISALRALKIL 156

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            +S  ++  LP  F  L+ L  L +  N L+  P     +    ++   ++L E+  A  
Sbjct: 157 WLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAAL 216

Query: 391 QPVKQKKSWVEMCFFSRSN 409
            P+    + +E  + SR+ 
Sbjct: 217 LPL----AGLEELYLSRNQ 231


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP   G+L++L SLDL  N++ ++P  IG L+ L+ LDL  N++  LP  I  L  L  L
Sbjct: 146 LPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSL 205

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ+S+LP    +L +L+ LDLGSN LSSLP  I  L  L+ L + +N L  LP  I
Sbjct: 206 DLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEI 265

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q ++L+ L +  N+L +LP  + ++  L+ L +  N +  LP  +  L+ L+ LD+  N
Sbjct: 266 VQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSN 325

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T L  +++G+N   L +LP  I  L  L+ LD+S+NQ+  LP     L
Sbjct: 326 QLSSLPPEIVQLTKLQSLDLGSN--QLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQL 383

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           ++L+ L +  N L   P  IV++
Sbjct: 384 TKLQSLYLSSNQLSSLPPEIVQL 406



 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/277 (36%), Positives = 160/277 (57%), Gaps = 4/277 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ   +D+  +  LP  IG+L++L +L L  N++ ++P  IG L++L+ L L  N++  
Sbjct: 40  NLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSS 99

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  L L  NQ+S+LP  + +L  L+ LDL SN LSSLP   G L +L+ L
Sbjct: 100 LPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSL 159

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + +N L  LP  IGQ + L+ L +  N+L +LP  + ++  L+ L +R N +  LP   
Sbjct: 160 DLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEF 219

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L+ L+ LD+  N+L S+P  +   T L  +++G+N   L +LP  I  L  L+ LD+S
Sbjct: 220 GQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSN--QLSSLPPEIVQLTNLQSLDLS 277

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +NQ+  LP     L++L+ L +  N L   P  IV++
Sbjct: 278 SNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQL 314



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/319 (34%), Positives = 168/319 (52%), Gaps = 32/319 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+ L SLDLS N++ ++P  I  L+ L+ LDL +N++  LP   G L  L  L
Sbjct: 169 LPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSL 228

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+S+LP  + +L +L+ LDLGSN LSSLP  I  L +L+ L + +N L  LP  I
Sbjct: 229 DLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEI 288

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q + L+ L +  N+L +LP  + ++  L+ L +  N +  LP  +  L+ L+ LD+  N
Sbjct: 289 VQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSN 348

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
           +L S+P  +   T L  +++ +N                        L +LP  I  L  
Sbjct: 349 QLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTK 408

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L+ LD+ +NQ+  LP   R LS L+ L ++ NP+ +PP     +G +A  Q   D+ E  
Sbjct: 409 LQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPVPIPPE---ILGPKADYQDPGDVNEIL 465

Query: 387 D--------AKTQPVKQKK 397
           D        A+T+P  + K
Sbjct: 466 DFYFRVQDPAETEPFYEAK 484



 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/292 (34%), Positives = 165/292 (56%), Gaps = 5/292 (1%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +L  +IE + K    +L+L  K    +  LP  IG+L++L +L L  N++ ++P  IG L
Sbjct: 5   ELLQIIEQAVKDEVTELDLSYK---GLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQL 61

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           ++L+ L L +N++  LP  IG L +L  L L  NQ+S+LP  + +L  L+ L L  N LS
Sbjct: 62  TNLQTLHLRSNQLSSLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLS 121

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           SLP  IG L +L+ L +++N L  LP   GQ ++L+ L +  N+L +LP  +G++  L+ 
Sbjct: 122 SLPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQS 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N +  LP  +  L+ L+ LD+  N+L S+P      T L  +++G+N   L +LP
Sbjct: 182 LDLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSN--QLSSLP 239

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             I  L  L+ LD+ +NQ+  LP     L+ L+ L +  N L   P  IV++
Sbjct: 240 PEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQL 291



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L++L SLDL  N++ ++P   G L++L+ LDL +N++  LP  IG L  L  L
Sbjct: 123 LPPEIGQLTNLQSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSL 182

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+S+LP  + +L +L+ LDL SN LSSLP   G L  L+ L + +N L  LP  I
Sbjct: 183 DLSRNQLSSLPPEIVQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEI 242

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q + L+ L +  N+L +LP  + ++  L+ L +  N +  LP  +  L+ L+ L +S N
Sbjct: 243 VQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSN 302

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T L  +++G+N   L +LP  I  L  L+ LD+ +NQ+  LP     L
Sbjct: 303 QLSSLPPEIVQLTKLQSLDLGSN--QLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQL 360

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  N L   P  IV++
Sbjct: 361 TNLQSLDLSSNQLSSLPPEIVQL 383



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L++L +L L  N++ ++P  IG L++L+ L L  N++  LP  IG L +L  L
Sbjct: 77  LPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSL 136

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+S+LP    +L  L+ LDLGSN LSSLP  IG L  L+ L +  N L  LP  I
Sbjct: 137 DLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEI 196

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q + L+ L +  N+L +LP   G++  L+ L +  N +  LP  +  L+ L+ LD+  N
Sbjct: 197 VQLTKLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSN 256

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T L  +++ +N   L +LP  I  L  L+ L +S+NQ+  LP     L
Sbjct: 257 QLSSLPPEIVQLTNLQSLDLSSN--QLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQL 314

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           ++L+ L +  N L   P  IV++
Sbjct: 315 TKLQSLDLGSNQLSSLPPEIVQL 337


>gi|157823447|ref|NP_001100786.1| malignant fibrous histiocytoma amplified sequence 1 [Rattus
           norvegicus]
 gi|149057953|gb|EDM09196.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_a [Rattus norvegicus]
          Length = 1046

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 127 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 187 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 246

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 247 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 306

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 307 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 364

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 365 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 405



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 61  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 120

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 121 ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 180

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A P+ +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 181 TLDVDHN--QLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 239 PSGFCELAS 247


>gi|124486881|ref|NP_001074748.1| malignant fibrous histiocytoma-amplified sequence 1 homolog [Mus
           musculus]
 gi|160013372|sp|Q3V1N1.2|MFHA1_MOUSE RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1
           homolog
 gi|148703507|gb|EDL35454.1| mCG19212, isoform CRA_a [Mus musculus]
          Length = 1048

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 127 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 187 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELA 246

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 247 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 306

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 307 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 364

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 365 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 405



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 104/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 61  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 120

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 121 ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 180

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A P+ +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 181 TLDVDHN--QLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 364 PRNIVEMGA 372
           PR   E+ +
Sbjct: 239 PRGFCELAS 247


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  158 bits (400), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/252 (39%), Positives = 147/252 (58%), Gaps = 3/252 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D IG L  L  L L  N + ++P  IG L+ L  L L  N+I++L  + G+L++L  L+L
Sbjct: 315 DGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNL 374

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
            GN I+ LP  +  L +L+EL L  NNL  LPDSIG+L SL  L +  N + ELP TIG 
Sbjct: 375 NGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGN 434

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             ++ +L +  NRL  LPE +  + ++  L ++ N IK LP  M +L++L++L +  N L
Sbjct: 435 LHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRL 494

Query: 290 ESVPESLC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
             +PES+   A  L  + I NN   LR LP SIGNL  L  LD +NN +  +P +   ++
Sbjct: 495 RCLPESIGNLAANLQSLKIRNN--RLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNIT 552

Query: 349 RLRVLRVQENPL 360
            L+ L + +NPL
Sbjct: 553 NLKTLNLTKNPL 564



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 108/270 (40%), Positives = 154/270 (57%), Gaps = 6/270 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           NKL+ N     +SIGKL +L  L+LS N++  +   IG L  L +L L  N +  LP++I
Sbjct: 284 NKLLRNRS---ESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPENI 340

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L  L  L L  N+I  L      LV L +L+L  NN++ LPD IG+L  LK+L +  N
Sbjct: 341 GKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWKN 400

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           +LE+LP +IG  +SL  L +  N++  LP+ +G +H +E L +  N +  LP T+S+L S
Sbjct: 401 NLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQS 460

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM-LEELDISNNQI 337
           +  L +  N ++ +PE +   T L K+ I NN   LR LP SIGNL   L+ L I NN++
Sbjct: 461 ISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNN--RLRCLPESIGNLAANLQSLKIRNNRL 518

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           R LP+S   L  L  L    N L   P+NI
Sbjct: 519 RCLPESIGNLVNLNSLDCTNNLLTDIPKNI 548



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 166/329 (50%), Gaps = 73/329 (22%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +G  S+L  L ++ + IV +P +IG LS L  LDL  NR+  LP+SIG L +LV+L+L
Sbjct: 199 EQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNL 258

Query: 170 RGNQISALPVALSRLVR------------------------------------------- 186
           + N I+ LP+++  LV                                            
Sbjct: 259 KCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIG 318

Query: 187 ----LEELDLGSNNLSSLPDSI-----------------------GSLISLKKLIVETND 219
               L EL LG+N L+SLP++I                       G+L++L+KL +  N+
Sbjct: 319 NLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNN 378

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +  LP  IG    L+EL +  N L+ LP+++G + +L +L +  N I +LP T+ +L ++
Sbjct: 379 INRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNI 438

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD+  N L  +PE++    ++  + +  N+  ++ LP  +GNL  L++L I NN++R 
Sbjct: 439 EKLDLYKNRLTCLPETISNLQSISHLYLQRNY--IKLLPEGMGNLTNLKKLKIWNNRLRC 496

Query: 340 LPDSF-RMLSRLRVLRVQENPLEVPPRNI 367
           LP+S   + + L+ L+++ N L   P +I
Sbjct: 497 LPESIGNLAANLQSLKIRNNRLRCLPESI 525



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/236 (37%), Positives = 137/236 (58%), Gaps = 3/236 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++IGKL+ L  L L  N+IV +    G L +L+KL+L+ N I  LPD IG+L  L  L
Sbjct: 336 LPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKEL 395

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  LP ++  L  L  LDLG N +S LPD+IG+L +++KL +  N L  LP TI
Sbjct: 396 YLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETI 455

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS-LRELDVSF 286
               S+  L +  N +K LPE +G +  L+ L +  N ++ LP ++ +L++ L+ L +  
Sbjct: 456 SNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRN 515

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           N L  +PES+     L  ++  NN   L  +P++IGN+  L+ L+++ N +  L D
Sbjct: 516 NRLRCLPESIGNLVNLNSLDCTNNL--LTDIPKNIGNITNLKTLNLTKNPLTDLTD 569



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 155/290 (53%), Gaps = 26/290 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SIG LS L  LDLS NR+ ++P +IG L +L  L+L  N I  LP SI  L++L YL
Sbjct: 220 IPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYL 279

Query: 168 DLRGNQ------------------------ISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           +L  N+                        +  L   +  L  L EL LG+N L+SLP++
Sbjct: 280 NLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNELHLGNNCLTSLPEN 339

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L  L  L +  N + +L    G   +LR+L ++ N +  LP+ +G +  L+ L +  
Sbjct: 340 IGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDDIGNLKKLKELYLWK 399

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           NN+++LP ++ +L+SL  LD+  N++  +P+++     + K+++  N   L  LP +I N
Sbjct: 400 NNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKN--RLTCLPETISN 457

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           L+ +  L +  N I++LP+    L+ L+ L++  N L   P +I  + A 
Sbjct: 458 LQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAAN 507



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 164/344 (47%), Gaps = 77/344 (22%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL-HANRIIELPDSIGDLLSLVY 166
           LP+SIG LS+L  LDL+ N I  +P +IG LS+L  L+L HA ++ ELPDSIG+L  L Y
Sbjct: 77  LPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTY 136

Query: 167 LDLRGNQISALPVALSRLVRLEELDLG-SNNLSSLPDSIGSL------------------ 207
           L+L    I+ LP ++  L RL+ L+L   + L  +P +IGSL                  
Sbjct: 137 LNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFK 196

Query: 208 --------ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
                    +L  L + ++ +  +P +IG  S L  L + +NRL +LPE++G +  L  L
Sbjct: 197 TIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWL 256

Query: 260 SVRYNNIKQLPTTM---------------------------------------------- 273
           +++ NNI  LP ++                                              
Sbjct: 257 NLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDG 316

Query: 274 -SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
             +L  L EL +  N L S+PE++   T L  + + NN   +  L ++ GNL  L +L++
Sbjct: 317 IGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINN--KIVDLTKNFGNLVNLRKLNL 374

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           + N I  LPD    L +L+ L + +N LE  P +I  + + +++
Sbjct: 375 NGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSIL 418



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 146/262 (55%), Gaps = 13/262 (4%)

Query: 43  DFLILQLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLI-----EVSSKKGT----R 93
           D L   +G++   N++ +   C+  + ++  KL+ +    LI     +++   G     R
Sbjct: 311 DILFDGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLR 370

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
            LNL     +NI  LPD IG L  L  L L +N +  +P +IG L+SL  LDL  N+I E
Sbjct: 371 KLNLNG---NNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISE 427

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPD+IG+L ++  LDL  N+++ LP  +S L  +  L L  N +  LP+ +G+L +LKKL
Sbjct: 428 LPDTIGNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKL 487

Query: 214 IVETNDLEELPHTIGQ-CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
            +  N L  LP +IG   ++L+ L++  NRL+ LPE++G +  L  L    N +  +P  
Sbjct: 488 KIWNNRLRCLPESIGNLAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKN 547

Query: 273 MSSLSSLRELDVSFNELESVPE 294
           + ++++L+ L+++ N L  + +
Sbjct: 548 IGNITNLKTLNLTKNPLTDLTD 569



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 144/264 (54%), Gaps = 7/264 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ + +LPD+IG L+ L  L ++   + ++P +IG LS L +L +   +I  LP+SIG+L
Sbjct: 25  VNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPESIGNL 84

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLG-SNNLSSLPDSIGSLISLKKLIVETNDL 220
            +L  LDL  N I  LP ++  L  L  L+L  +  L+ LPDSIG+L  L  L +    +
Sbjct: 85  SNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLSAGVI 144

Query: 221 EELPHTIGQCSSLRELRVDY-NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL--- 276
             LP +IG    L+ L + + ++L+ +P A+G +  L  + +  +    +  T+  L   
Sbjct: 145 TTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQLGAQ 204

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           S+L  L ++ + + ++PES+   + L  +++ +N   L +LP SIG L+ L  L++  N 
Sbjct: 205 SNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHN--RLNSLPESIGLLKNLVWLNLKCNN 262

Query: 337 IRVLPDSFRMLSRLRVLRVQENPL 360
           I +LP S   L  L  L +  N L
Sbjct: 263 IAILPISIEHLVNLTYLNLYSNKL 286



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/253 (28%), Positives = 133/253 (52%), Gaps = 26/253 (10%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++  LPD+IGDL  L  L +    +++LP ++  L +L  L + +  ++ LP+S
Sbjct: 21  LRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTKIARLPES 80

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY-NRLKALPEAVGKIHTLEVLSVR 262
           IG+L +LK+L +  N +E LP +IG  S+L  L + +  +L  LP+++G +  L  L++ 
Sbjct: 81  IGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNLSKLTYLNLS 140

Query: 263 YNNIKQLPTTMSSLSSLRELDVSF-NELESVPESLCFATTLVKMNIGN------------ 309
              I  LP ++ +L  L+ L++S+ ++L+ +P ++     L  + +              
Sbjct: 141 AGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQSSIFKTIEQ 200

Query: 310 ------------NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
                       N + +  +P SIGNL  L  LD+S+N++  LP+S  +L  L  L ++ 
Sbjct: 201 LGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKC 260

Query: 358 NPLEVPPRNIVEM 370
           N + + P +I  +
Sbjct: 261 NNIAILPISIEHL 273



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 25/185 (13%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E LPDSIG L+SL  LDL  N+I  +P TIG L +++KLDL+ NR+  LP++I +L 
Sbjct: 400 NNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETISNLQ 459

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSN--------------NLSSL-------- 200
           S+ +L L+ N I  LP  +  L  L++L + +N              NL SL        
Sbjct: 460 SISHLYLQRNYIKLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIRNNRLR 519

Query: 201 --PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
             P+SIG+L++L  L    N L ++P  IG  ++L+ L +  N L  L + +  + T+  
Sbjct: 520 CLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLTDLTD-LSVLQTIPN 578

Query: 259 LSVRY 263
           L+V +
Sbjct: 579 LTVHW 583



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 113/203 (55%), Gaps = 4/203 (1%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           +A ++  R   L LG N L+ LPD+IG L  L +L +    L  LP +IG  S L  L V
Sbjct: 10  IATAKRERWSILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYV 69

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF-NELESVPESLC 297
              ++  LPE++G +  L+ L + +N I+ LPT++  LS+L  L++S   +L  +P+S+ 
Sbjct: 70  RNTKIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIG 129

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN-NQIRVLPDSFRMLSRLRVLRVQ 356
             + L  +N+      +  LP SIGNL+ L+ L++S  +Q++ +P +   L  L  +++ 
Sbjct: 130 NLSKLTYLNLS--AGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLW 187

Query: 357 ENPLEVPPRNIVEMGAQAVVQYM 379
            +      + I ++GAQ+ + ++
Sbjct: 188 GSGQSSIFKTIEQLGAQSNLTHL 210


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGKLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 325 QRLQTLYLGNNQLNFLPNKVEQL 347



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L++
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|149057954|gb|EDM09197.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 1048

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 127 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 186

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 187 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 246

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 247 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 306

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 307 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 364

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 365 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 405



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 103/189 (54%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 61  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 120

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 121 ILGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 180

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A P+ +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 181 TLDVDHN--QLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 239 PSGFCELAS 247


>gi|283132365|dbj|BAI63588.1| leucine rich repeat protein [Lotus japonicus]
          Length = 350

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/278 (38%), Positives = 159/278 (57%), Gaps = 6/278 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L  +  LDL  N +  +P +L+ RL+ +  LD+ SN L S
Sbjct: 33  LEIVDLSGMSLESLPNPSLNLAIICKLDLSNNNLQNIPESLTARLLNMVVLDVHSNQLRS 92

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+S+G L  LK L V  N +E LP +I  C +L EL  ++N+L  LP+ +G ++  L+ 
Sbjct: 93  LPNSVGCLSKLKVLNVSGNLIEYLPKSIENCRALEELNANFNKLSQLPDTMGFELLNLKK 152

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP + S L+SL+ LD   N L S+P+ L     L  +N+  NF  L  LP
Sbjct: 153 LSVNSNKLVFLPRSTSHLTSLKILDARLNCLRSLPDDLENLINLETLNVSQNFQYLDTLP 212

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD+S N+++ LPDS   L +L+ L V+ NPL  PP  +VE G  AV +Y
Sbjct: 213 YSIGLLLSLVELDVSYNRVKSLPDSIGCLKKLQKLSVEGNPLVSPPPEVVEQGLHAVKEY 272

Query: 379 MADLVEKRDAKTQPVKQKKSWV-EMCFFSRSNKRKRNG 415
           + +   K ++  Q   +KKSWV ++  +   N   R+G
Sbjct: 273 LCN---KMNSAHQSPTKKKSWVGKLVKYGTFNGHARSG 307



 Score = 46.6 bits (109), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LPD +  L +L +L++S+N   +  +P +IG L SL +LD+  NR+  LPDSIG L  L 
Sbjct: 186 LPDDLENLINLETLNVSQNFQYLDTLPYSIGLLLSLVELDVSYNRVKSLPDSIGCLKKLQ 245

Query: 166 YLDLRGNQISALP 178
            L + GN + + P
Sbjct: 246 KLSVEGNPLVSPP 258



 Score = 44.7 bits (104), Expect = 0.078,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 35/54 (64%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           ++ LP SIG L SLV LD+S NR+ ++P +IG L  L+KL +  N ++  P  +
Sbjct: 208 LDTLPYSIGLLLSLVELDVSYNRVKSLPDSIGCLKKLQKLSVEGNPLVSPPPEV 261


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  158 bits (400), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 96/266 (36%), Positives = 152/266 (57%), Gaps = 4/266 (1%)

Query: 102 MDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           +DN  +  LP  IG+L +L SLDLS NR+  +P  IG L +L+ LDL  NR+  LP  IG
Sbjct: 124 LDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIG 183

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I  L +LK L + +N 
Sbjct: 184 HLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 243

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N +  LP  +  L +L
Sbjct: 244 LTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNL 303

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + LD+S+N+L+++P+ +     L  + +G  +  L  LP+ IG L+ L+ L ++NNQ+  
Sbjct: 304 QLLDLSYNQLKTLPKEIEQLKNLQTLYLG--YNQLTVLPKEIGQLQNLKVLFLNNNQLTT 361

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPR 365
           LP     L  L+ L +  N L +  +
Sbjct: 362 LPKEIGQLKNLQELYLNNNQLSIEEK 387



 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L +N++  +P  IG L +LK L+L  N+I  +P  I  L  L  L
Sbjct: 63  LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDL +N L++LP  IG L +L+ L + TN L  LP  I
Sbjct: 123 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL +  N+L  LP  +G++  L+ L++R N +  L   +  L +L+ LD+  N
Sbjct: 183 GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L   P+ +     L  +++G+N   L  LP  IG L+ L+ LD+ +NQ+  LP   + L
Sbjct: 243 QLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L++L +  N L+  P+ I ++
Sbjct: 301 KNLQLLDLSYNQLKTLPKEIEQL 323



 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SL+LS N+I  +P  I  L  L+ L L  N++  LP  IG L +L  L
Sbjct: 86  LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ LDL +N L++LP  IG L +L++L + +N L  LP+ I
Sbjct: 146 DLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEI 205

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  NRL  L + + ++  L+ L +R N +   P  +  L +L+ LD+  N
Sbjct: 206 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN 265

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +++ +N   L  LP+ I  L+ L+ LD+S NQ++ LP     L
Sbjct: 266 QLTTLPEGIGQLKNLQTLDLDSN--QLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQL 323

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L V P+ I ++
Sbjct: 324 KNLQTLYLGYNQLTVLPKEIGQL 346



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  LDL  N+++ LP  +  L  L+EL L SN L+ LP+ I
Sbjct: 146 DLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  L   I Q  +L+ L +  N+L   P+ +G++  L+VL +  N
Sbjct: 206 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+  N+L ++P+ +     L  +++   +  L+ LP+ I  L
Sbjct: 266 QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLS--YNQLKTLPKEIEQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  NQ+ VLP     L  L+VL +  N L   P+ I ++
Sbjct: 324 KNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQL 369



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 150/281 (53%), Gaps = 5/281 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  ++LNL NK  + +  LP  IG+L +L  L+LS N+I  +P  I  L  L+ L L  N
Sbjct: 2   KNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNN 58

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           ++  LP  IG L  L +L L  NQ++ LP  + +L  L+ L+L  N + ++P  I  L  
Sbjct: 59  QLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQK 118

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L+ L ++ N L  LP  IGQ  +L+ L +  NRL  LP+ +G++  L+ L +  N +  L
Sbjct: 119 LQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTL 178

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  +  L +L+EL +  N+L  +P  +     L  +N+ NN   L  L + I  L+ L+ 
Sbjct: 179 PQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNN--RLTTLSKEIEQLQNLKS 236

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LD+ +NQ+ + P     L  L+VL +  N L   P  I ++
Sbjct: 237 LDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 277



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 145/256 (56%), Gaps = 2/256 (0%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           + +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L L  NQ+
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           + LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I +   L+
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQ 120

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+
Sbjct: 121 SLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ 180

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +     L ++ + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L 
Sbjct: 181 EIGHLQNLQELYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLD 238

Query: 355 VQENPLEVPPRNIVEM 370
           ++ N L + P+ I ++
Sbjct: 239 LRSNQLTIFPKEIGQL 254


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 89/266 (33%), Positives = 154/266 (57%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+L+ N++  +P  IG L +L+ L+L  N++  LP+ IG L + 
Sbjct: 58  LKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNF 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++ LP  + +L  L EL L +N  ++ P  IG L +L++L +  N L+ LP
Sbjct: 118 QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +LREL + YN+LK L   +G++  L+VL +  N +K LP  +  L +L+ LD+
Sbjct: 178 NEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+ ++VPE +     L  +++G  +   + +   IG L+ L+ L ++NNQ++ L    
Sbjct: 238 NNNQFKTVPEEIGQLKNLQVLDLG--YNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEI 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L++L +  N L   P  I ++
Sbjct: 296 GQLKNLQMLSLNANQLTTLPNEIRQL 321



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 135/234 (57%), Gaps = 2/234 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L+ N+  A P  IG L +L++L+L+AN++  LP+ IG L +L  L
Sbjct: 130 LPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLREL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  L   + +L  L+ LDL  N L +LP  IG L +L+ L +  N  + +P  I
Sbjct: 190 HLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN+ K + E +G++  L++L +  N +K L   +  L +L+ L ++ N
Sbjct: 250 GQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNAN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           +L ++P  +     L ++++   +  L+ L   IG L+ L++L + +NQ+  LP
Sbjct: 310 QLTTLPNEIRQLKNLRELHLS--YNQLKTLSAEIGQLKNLKKLSLRDNQLTTLP 361



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 120/212 (56%), Gaps = 3/212 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + ++ LP+ IG+L +L  L LS N++  + A IG L +L+ L
Sbjct: 156 EIGQLKNLQQLNL---YANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N++  LP  IG L +L  LDL  NQ   +P  + +L  L+ LDLG N   ++ + I
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L+ L   IGQ  +L+ L ++ N+L  LP  + ++  L  L + YN
Sbjct: 273 GQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +K L   +  L +L++L +  N+L ++P+ +
Sbjct: 333 QLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 364



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L+L +N L++LP  IG L +L+ 
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQW 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + TN L  LP  IGQ  + + L +  NRL  LP+ +G++  L  L +  N     P  
Sbjct: 97  LNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L++  N+L+++P  +     L ++++   +  L+ L   IG L+ L+ LD+
Sbjct: 157 IGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLS--YNQLKTLSAEIGQLQNLQVLDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++NQ++ LP     L  L+VL +  N  +  P  I ++
Sbjct: 215 NDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQL 252


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 325 QRLQTLYLGNNQLNFLPNKVEQL 347



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 115/212 (54%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L++
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|194226479|ref|XP_001494647.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Equus caballus]
          Length = 1152

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 164/286 (57%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 231 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLYRLRTLDVDH 290

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 291 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 350

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 351 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 410

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 411 VPSLISGLSRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 468

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 469 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 509



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 165 IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 224

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 225 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLYRLR 284

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 285 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 342

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 343 PSGFCELAS 351


>gi|359462332|ref|ZP_09250895.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 407

 Score =  158 bits (399), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/275 (37%), Positives = 157/275 (57%), Gaps = 4/275 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG LS L SL LSEN ++ +P  +G L+ L+ LDL  NR+  L D +G L  L  L
Sbjct: 35  LPDSIGSLSQLKSLYLSENELMRLPKALGQLTQLQVLDLARNRLPILTDVLGYLSQLQSL 94

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GN +  LP  +    +L  L+L SN L  LP SIG L +L++L +  N + + P  +
Sbjct: 95  DLTGNALVELPEFIGAFSQLRSLNLASNQLVHLPSSIGKLKNLQELQLSYNSMAQWPEEL 154

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + LR L +    L  +P A   +  LE L++ +N++K LP  + +L+ LR LD+SFN
Sbjct: 155 GLLTGLRSLEITSTGLNEIPPAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFN 214

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P +L   T L  ++I +N   L++LP  I NL  L  L   NNQ+  LP+++  L
Sbjct: 215 QLSELPAALGSLTPLTSLDIQSN--QLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRL 272

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           + L  L +  N +   P +I E+  Q + Q++ +L
Sbjct: 273 AALTTLGIAGNRIRQLPESIGEL--QNLKQFIFNL 305



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 113/350 (32%), Positives = 172/350 (49%), Gaps = 20/350 (5%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ----DGEKLSLIKLASLIEVSSKKGTRDLN 96
           LT   +L L     RN++PI+   +  + Q    D    +L++L   I   S+   R LN
Sbjct: 65  LTQLQVLDLA----RNRLPILTDVLGYLSQLQSLDLTGNALVELPEFIGAFSQ--LRSLN 118

Query: 97  L-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP 155
           L  N+L+     LP SIGKL +L  L LS N +   P  +G L+ L+ L++ +  + E+P
Sbjct: 119 LASNQLVH----LPSSIGKLKNLQELQLSYNSMAQWPEELGLLTGLRSLEITSTGLNEIP 174

Query: 156 DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
            +   L  L  L+L  N +  LP  L  L  L  LDL  N LS LP ++GSL  L  L +
Sbjct: 175 PAWRSLEGLESLNLSFNHLKTLPEWLGTLTDLRSLDLSFNQLSELPAALGSLTPLTSLDI 234

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           ++N L+ LP  I    +L  L    N+L  LPEA G++  L  L +  N I+QLP ++  
Sbjct: 235 QSNQLQSLPPQICNLVNLTSLLAYNNQLTHLPEAWGRLAALTTLGIAGNRIRQLPESIGE 294

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA----DLRALPRSIGNLEMLEELD 331
           L +L++   + +  + VP    F   L    +         +LR+LP  IG L  L+ L+
Sbjct: 295 LQNLKQFIFNLDPDQPVPLQ-VFPAALRGCRLLEQLTFVACELRSLPPWIGELTQLKSLN 353

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           +S+N +  LP S   L  L+ L +  NPL      + E G  A+  Y+ +
Sbjct: 354 VSHNNLTDLPLSLGTLDNLKTLNLSNNPLRSELEVLWERGPNAIKNYLQN 403


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/309 (33%), Positives = 160/309 (51%), Gaps = 48/309 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP----------------- 270
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP                 
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 271 -------------------------TTM----SSLSSLRELDVSFNELESVPESLCFATT 301
                                    TT+      L +L+ELD+  N+L ++PE++     
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQR 326

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  + +GNN   L  LP+ IG L  LE LD+ +NQ+  LP     L +L+ L ++ N L 
Sbjct: 327 LQTLYLGNN--QLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLA 384

Query: 362 VPPRNIVEM 370
             P  I ++
Sbjct: 385 TLPEEIKQL 393



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/276 (32%), Positives = 155/276 (56%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL +   + +  LP+ I +L  L +L L  N+  ++   IG L +L+ L
Sbjct: 136 EIGQLQNLQELNLAH---NQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESL 192

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L L  NQ++ LP  + +L  L+ L L +N L++LP  I
Sbjct: 193 GLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEI 252

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+KL++  N L  LP  IGQ  +L++L++  N+L  LP+ +G++  L+ L +  N
Sbjct: 253 GQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGN 312

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L  L+ L +  N+L  +P+ +     L  +++ +N   L ALP+ IG L
Sbjct: 313 QLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHN--QLNALPKEIGKL 370

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++  NQ+  LP+  + L  L+ L +  NPL
Sbjct: 371 QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG   
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L  L L  NQ++ LP  + +L  L+ELDL  N L++
Sbjct: 257 NLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP  IGQ  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|297682314|ref|XP_002818869.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Pongo abelii]
          Length = 1029

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/288 (37%), Positives = 163/288 (56%), Gaps = 7/288 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+
Sbjct: 129 DVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDV 188

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    +
Sbjct: 189 DHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCE 248

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            +SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L
Sbjct: 249 LASLESLMLDNNGLRALPAQFSSLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQL 308

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR
Sbjct: 309 TSVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSR 366

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 367 VGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 128/265 (48%), Gaps = 29/265 (10%)

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLE 188
           +PA +G    ++ L+L  N + E+P+ +G  L SL  L LR N+ + LP A++ L   L 
Sbjct: 58  LPANLG---DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           ELD+  N L++L   + S +                        LR+L + +N+L ALP 
Sbjct: 115 ELDVSHNRLTALGADVVSALR----------------------ELRKLNLSHNQLPALPA 152

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +G +  LE L V +N +  LP ++S LS LR LDV  N+L + P  L     L ++++ 
Sbjct: 153 QLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLAALEELDVS 212

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +N   LR LP  I  L  L+ L +S  ++  LP  F  L+ L  L +  N L   P    
Sbjct: 213 SN--RLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLRALPAQFS 270

Query: 369 EMGAQAVVQYMADLVEKRDAKTQPV 393
            +    ++   ++L E+  A   P+
Sbjct: 271 SLQRLKMLNLSSNLFEEFPAALLPL 295


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  158 bits (399), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/273 (36%), Positives = 156/273 (57%), Gaps = 2/273 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP   G+LS L  LDL EN +  +P   G L +L+K+DL  N++I LP  IG L +L  L
Sbjct: 147 LPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELL 206

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  NQ+++LP  L +L +L++L+L  N LS LP S   LI+LK L + +N   +LP  I
Sbjct: 207 EIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEI 266

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + ++L+ L V  N+L  L   +G++  LE+L +  N +  LPT +  L+SLR   ++ N
Sbjct: 267 SRLTNLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVN 326

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +   T LV +N+  N   L  LP  I  L  LE L +S N+I  LP   + L
Sbjct: 327 HLSNLPKEIGHLTNLVTLNLQEN--QLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQL 384

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           ++L+ L + +NP+ +PP  + E   + +  Y  
Sbjct: 385 TKLKHLDLSKNPISIPPEILKEKPQKILNCYFT 417



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/317 (31%), Positives = 159/317 (50%), Gaps = 28/317 (8%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI--- 135
           +L  +IE + K+G   LNL     +++ +LP  I KL +L  L L  N +  +P  I   
Sbjct: 6   ELLKIIEQTEKEGLTTLNLSG---EDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQL 62

Query: 136 --------------------GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
                                 L++LK L L  N +  LP+ IG+L +L YLDL  NQ++
Sbjct: 63  KKLKLLDLSNNLIKSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLN 122

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP    +L++L+EL L  N L+SLP   G L  LK+L +  N+L  LP   G+  +L++
Sbjct: 123 QLPPEFGKLIKLQELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQK 182

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + +  N+L  LP+ +G++  LE+L +  N +  LP  +  LS L++L++S N+L  +P S
Sbjct: 183 VDLGNNKLITLPKEIGQLANLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLS 242

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                 L  + + +N      LP  I  L  L+ L +  NQ+  L      LS L +L +
Sbjct: 243 QAKLINLKTLYLCSN--QFTKLPAEISRLTNLKSLYVIQNQLNNLTPEIGQLSNLELLDI 300

Query: 356 QENPLEVPPRNIVEMGA 372
            EN L   P  I ++ +
Sbjct: 301 SENKLNSLPTEIEKLTS 317


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  157 bits (398), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 153/266 (57%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L +L L  N++  +P  IG L +L+ L+L  N++  LP+ IG L++L
Sbjct: 58  LKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQ+  LP  +++L  L  L L +N L  LP  IG L +L+ L + TN L+ LP
Sbjct: 118 QTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +L+ L +  N L  LP+ +G++  L  L +  N +K LP  +  L +L+ L +
Sbjct: 178 NEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+L ++P  +     L ++ +G N   L  LP+ +G L+ L+ LD+  NQ +++P+  
Sbjct: 238 SDNQLTTLPNEIGQLKNLYELYLGKNL--LTTLPKEVGQLKNLKMLDLGYNQFKIIPNEI 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  LR LR++ N     P+ I ++
Sbjct: 296 EQLQNLRTLRLRNNQFTALPKEIRQL 321



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 160/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  LP+ IG+L +L +LDL  N++V +P  I  L +L+ L
Sbjct: 87  EIGQLKNLQTLNLD---TNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  LDL  NQ+ ALP  + +L  L+ LDL  N L+ LP  I
Sbjct: 144 GLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L + +N L+ LP  IGQ  +L+ L +  N+L  LP  +G++  L  L +  N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+ +N+ + +P  +     L  + + NN     ALP+ I  L
Sbjct: 264 LLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNN--QFTALPKEIRQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L ++NNQ++ LP+    L  L+VL + +N L+  P  I ++
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKL 367



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 146/253 (57%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L LS N++  +P  IG L +L+ LDL+ N++  LP+ IG L +L  L
Sbjct: 130 LPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N ++ LP  + +L  L EL L SN L +LP  IG L +L+ L +  N L  LP+ I
Sbjct: 190 DLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L EL +  N L  LP+ VG++  L++L + YN  K +P  +  L +LR L +  N
Sbjct: 250 GQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  ++P+ +     L  + + NN   L+ LP  I  L+ L+ LD+++NQ++ LP+    L
Sbjct: 310 QFTALPKEIRQLQNLQVLFLNNN--QLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKL 367

Query: 348 SRLRVLRVQENPL 360
             L+VL ++ N L
Sbjct: 368 QNLQVLDLRNNEL 380



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L +L+L  N++  +P  IG L +L+ LDL  N+++ LP  I  L +L  L
Sbjct: 84  LPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL +N L +LP+ IG L +L+ L +  N L  LP  I
Sbjct: 144 GLSNNQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEI 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +LREL +  N+LK LP+ +G++  L+ L +  N +  LP  +  L +L EL +  N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  +++G  +   + +P  I  L+ L  L + NNQ   LP   R L
Sbjct: 264 LLTTLPKEVGQLKNLKMLDLG--YNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQL 321

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+VL +  N L+  P  I ++
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKL 344



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 142/253 (56%), Gaps = 5/253 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E++  +  R L L N   + ++ LP  IG+L +L +LDL  N++ A+P  IG L +L+ L
Sbjct: 133 EINQLQNLRVLGLSN---NQLKILPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N +  LP  IG L +L  L L  NQ+  LP  + +L  L+ L L  N L++LP+ I
Sbjct: 190 DLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L +L +  N L  LP  +GQ  +L+ L + YN+ K +P  + ++  L  L +R N
Sbjct: 250 GQLKNLYELYLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
               LP  +  L +L+ L ++ N+L+++P  +     L  +++ +N   L+ LP  I  L
Sbjct: 310 QFTALPKEIRQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDN--QLKTLPNEIEKL 367

Query: 325 EMLEELDISNNQI 337
           + L+ LD+ NN++
Sbjct: 368 QNLQVLDLRNNEL 380



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 124/218 (56%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L L +N L++LP+ IG L +L+ 
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQT 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L ++TN L  LP+ IGQ  +L+ L + +N+L  LP+ + ++  L VL +  N +K LP  
Sbjct: 97  LNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ LD+  N+L+++P  +     L  +++  N   L  LP+ IG L+ L EL +
Sbjct: 157 IGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNI--LTILPKEIGQLKNLRELYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ++ LP     L  L+ L + +N L   P  I ++
Sbjct: 215 SSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQL 252



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 104/184 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L L  N++  LP+ IG L +L  L
Sbjct: 199 LPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYEL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP  + +L  L+ LDLG N    +P+ I  L +L+ L +  N    LP  I
Sbjct: 259 YLGKNLLTTLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L ++ N+LK LP  + K+  L+VL +  N +K LP  +  L +L+ LD+  N
Sbjct: 319 RQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNN 378

Query: 288 ELES 291
           EL S
Sbjct: 379 ELSS 382


>gi|345319947|ref|XP_001520433.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence
           1-like, partial [Ornithorhynchus anatinus]
          Length = 461

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/283 (37%), Positives = 158/283 (55%), Gaps = 3/283 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +++G L  L  L L  N++ A+PA +G L  L++LDL  NR+  LPDS+  L  L  LD+
Sbjct: 102 EAVGALGQLRKLCLGHNQLAALPARLGALVHLEELDLSFNRLAGLPDSLACLRRLRTLDV 161

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++A P  L  L  LEELD+  N L  LP+ IG+L +LK L +   +L ELP    +
Sbjct: 162 DHNQLTAFPRPLLALAALEELDVSGNRLGRLPEEIGALRALKILWLSGAELAELPGGFCE 221

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            + L  L +D NRL+ALP     +H L+ L +  N +++ P  +  L+ L EL +S N L
Sbjct: 222 LAGLESLMLDNNRLRALPPRFSLLHRLKTLDLSSNLLEEFPGALLPLAGLEELYLSRNRL 281

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            +VP  +     L+ + + +N   LR LP +I  L  LEEL +  NQI VLP+ F  L+R
Sbjct: 282 SAVPALIAGLGRLLALWLDHN--RLRYLPDAIVELAGLEELVLQGNQIAVLPEDFGQLTR 339

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
           + + ++++NPL  PP  +   G   +  Y  +L   R A  QP
Sbjct: 340 VGLWKIRDNPLIQPPYEVCMKGIPYIAAYQKELAHSRPA-VQP 381



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/189 (34%), Positives = 99/189 (52%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG N L  LP+ +G +L  L+ L +  N L  LP  + +    L EL + +NRL 
Sbjct: 38  VEVLNLGHNGLEWLPEGLGPALGGLRVLNLRRNRLPRLPPALAELGGHLTELDLSHNRLS 97

Query: 245 ALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  EAVG +  L  L + +N +  LP  + +L  L ELD+SFN L  +P+SL     L 
Sbjct: 98  GLGDEAVGALGQLRKLCLGHNQLAALPARLGALVHLEELDLSFNRLAGLPDSLACLRRLR 157

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S N++  LP+    L  L++L +    L   
Sbjct: 158 TLDVDHN--QLTAFPRPLLALAALEELDVSGNRLGRLPEEIGALRALKILWLSGAELAEL 215

Query: 364 PRNIVEMGA 372
           P    E+  
Sbjct: 216 PGGFCELAG 224



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/83 (44%), Positives = 49/83 (59%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E  P ++  L+ L  L LS NR+ AVPA I GL  L  L L  NR+  LPD+I +L  L
Sbjct: 258 LEEFPGALLPLAGLEELYLSRNRLSAVPALIAGLGRLLALWLDHNRLRYLPDAIVELAGL 317

Query: 165 VYLDLRGNQISALPVALSRLVRL 187
             L L+GNQI+ LP    +L R+
Sbjct: 318 EELVLQGNQIAVLPEDFGQLTRV 340


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  157 bits (398), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 159/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L +L LSEN++   P  IG L +L++L
Sbjct: 183 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 239

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  LP  IG L +L  L+L  NQ++  P  + +L +L +L LG N L++ P  I
Sbjct: 240 NLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEI 299

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +   IGQ  +L +L + YN+L  LP  +G++  L+ LS+  N
Sbjct: 300 GQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN 359

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  LD+  N+L ++P+ +     L  + +G N   L   P+ IG L
Sbjct: 360 QLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRN--QLATFPKEIGQL 417

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           E L+ELD+ NN++  LP     L  L  L + EN L   P+ I ++
Sbjct: 418 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 463



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 165/309 (53%), Gaps = 28/309 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 68  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 124

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 125 GLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 184

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L++++N
Sbjct: 185 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWN 244

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  L++S N+L + P+ +     L  + +G N   L   P+ IG L
Sbjct: 245 RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRN--QLTTFPKEIGQL 302

Query: 325 EMLEELDI-----------------------SNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           + L+ LD+                       S NQ+  LP     L +L+ L +  N L 
Sbjct: 303 KNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLT 362

Query: 362 VPPRNIVEM 370
             P+ I ++
Sbjct: 363 TLPKEIGQL 371



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L  N++  +P  IG L +L  LDL  N++  LP  IG L +L  L
Sbjct: 341 LPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNL 400

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+ELDL +N L++LP  IG L +L+ L +  N L   P  I
Sbjct: 401 GLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEI 460

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L++L + YNRL  LP+ +G++  L+ L + YN +  LP  +  L +L+ LD+ +N
Sbjct: 461 GQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQMLDLCYN 520

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + ++V + +     L+++N+  ++  L  LP  IG L+ L  LD+  NQ+  LP     L
Sbjct: 521 QFKTVSKEIGQLKNLLQLNL--SYNQLATLPAEIGQLKNLYNLDLGTNQLTTLPKEIGQL 578

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L +  N L   P+ I
Sbjct: 579 KNLYNLGLGTNQLTTLPKEI 598



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 157/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L+L +NR+  +P  IG L +L+ L
Sbjct: 137 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTL 193

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L L  NQ++  P  + +L  L+EL+L  N L++LP  I
Sbjct: 194 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEI 253

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L   P  IGQ   LR+L +  N+L   P+ +G++  L++L + YN
Sbjct: 254 GQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNLQMLDLCYN 313

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  LP+ IG L
Sbjct: 314 QFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRN--QLTTLPKEIGQL 371

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L  LD+  NQ+  LP     L  L  L +  N L   P+ I ++
Sbjct: 372 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQL 417



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 94/264 (35%), Positives = 149/264 (56%), Gaps = 6/264 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L  E+   K  +DL+L     + +  LP  IG+L +L +LDL  N++  +P  IG 
Sbjct: 337 QLATLPAEIGQLKKLQDLSLGR---NQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEIGQ 393

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L  L L  N++   P  IG L +L  LDL  N+++ALP  + +L  LE L+L  N L
Sbjct: 394 LKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQL 453

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++ P  IG L  L+ L +  N L  LP  IGQ   L++L + YNRL  LP+ +G++  L+
Sbjct: 454 TTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNLQ 513

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           +L + YN  K +   +  L +L +L++S+N+L ++P  +     L  +++G N   L  L
Sbjct: 514 MLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTN--QLTTL 571

Query: 318 PRSIGNLEMLEELDISNNQIRVLP 341
           P+ IG L+ L  L +  NQ+  LP
Sbjct: 572 PKEIGQLKNLYNLGLGTNQLTTLP 595



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  LDL +N++   PA I  L  L+ LDL  NR++ LP+ IG L 
Sbjct: 60  QNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQ 119

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++   P  + +L  L+ L+L  N L++LP  IG L +L+KL +  N L  
Sbjct: 120 NLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTV 179

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +  N +   P  +  L +L+EL
Sbjct: 180 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 239

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++ +N L ++P+ +     L  + +  N   L   P+ IG L+ L +L +  NQ+   P 
Sbjct: 240 NLKWNRLTALPKEIGQLKNLENLELSEN--QLTTFPKEIGQLKKLRDLGLGRNQLTTFPK 297

Query: 343 SFRMLSRLRVL 353
               L  L++L
Sbjct: 298 EIGQLKNLQML 308



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/256 (35%), Positives = 138/256 (53%), Gaps = 5/256 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  RDL L     + +   P  IG+L +L  LDL  N+   V   IG L +L +L
Sbjct: 275 EIGQLKKLRDLGLGR---NQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQL 331

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L  L  L L  NQ++ LP  + +L  L  LDLG+N L++LP  I
Sbjct: 332 NLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTLPKEI 391

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  L +  N L   P  IGQ  +L+EL +  NRL ALP+ +G++  LE L +  N
Sbjct: 392 GQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSEN 451

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L  L++L +S+N L  +P+ +     L   ++G ++  L  LP+ IG L
Sbjct: 452 QLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL--QDLGLSYNRLVILPKEIGQL 509

Query: 325 EMLEELDISNNQIRVL 340
           + L+ LD+  NQ + +
Sbjct: 510 KNLQMLDLCYNQFKTV 525



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 118/227 (51%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDL  NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 55  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 114

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 115 IGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 174

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 175 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 232

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LE L+EL++  N++  LP     L  L  L + EN L   P+ I ++
Sbjct: 233 LENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 279



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L +++ + L++  L+L G   + LP  + +L  L+ELDLG N L++ P  I  L  L+ 
Sbjct: 41  DLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLES 100

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP+ IG+  +L+EL +  N+L   P+ +G++  L+ L+++ N +  LP  
Sbjct: 101 LDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVE 160

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L +L++  N L  +P+ +     L  +N+ +N   L  LP  IG L+ L+ L +
Sbjct: 161 IGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDN--QLATLPVEIGQLQNLQTLGL 218

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S NQ+   P     L  L+ L ++ N L   P+ I ++
Sbjct: 219 SENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQL 256



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 94/181 (51%), Gaps = 5/181 (2%)

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           L +++ + ++++ L +   +   LP  I Q  +L+EL +  N+L   P  + ++  LE L
Sbjct: 42  LTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESL 101

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L+EL +  N+L + P+ +     L  +N+ +N   L  LP 
Sbjct: 102 DLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDN--QLATLPV 159

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            IG L+ LE+L++  N++ VLP     L  L+ L +Q+N L   P   VE+G    +Q +
Sbjct: 160 EIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLP---VEIGQLQNLQTL 216

Query: 380 A 380
            
Sbjct: 217 G 217


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  157 bits (398), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 92/258 (35%), Positives = 155/258 (60%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  I +L +L  L L +N++  +P  IG L +L++L L  N+++ LP+ IG L 
Sbjct: 123 NQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLK 182

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ALP  + +L  L+EL LGSN L++LP+ IG L  L++L + TN L  
Sbjct: 183 NLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLTT 242

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ  +L++L +  N+L  LP  +G++  L+ L +R N +  L   +  L +L+ L
Sbjct: 243 LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 302

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L + P+ +     L  +++G+N   L  LP+ IG L+ L+  +++NNQ+  LP 
Sbjct: 303 DLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPK 360

Query: 343 SFRMLSRLRVLRVQENPL 360
               L  L+ L + +N L
Sbjct: 361 EIGQLQNLQELYLIDNQL 378



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 147/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I +L  L  L LS N++  +P  I  L +L++L L  N++  LP  IG L 
Sbjct: 100 NQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLK 159

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ+  LP  + +L  L+ L+LG N L++LP+ IG L +L++L + +N L  
Sbjct: 160 NLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTA 219

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ   L+EL +  NRL  LP  +G++  L+ L +  N +  LP  +  L +L+ L
Sbjct: 220 LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTL 279

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++ + +     L  +++ NN   L   P+ I  L+ L+ LD+ +NQ+  LP 
Sbjct: 280 YLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPK 337

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+V  +  N L   P+ I ++
Sbjct: 338 EIGQLKNLQVFELNNNQLTTLPKEIGQL 365



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 145/266 (54%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ I +L +L  L LS N++  +P  IG L +L+ L+L  N++  LP+ I  L  L
Sbjct: 56  LKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLETLPNEIEQLKDL 115

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ+  LP  + +L  L+EL L  N L++LP  IG L +L++L +  N L  LP
Sbjct: 116 QRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLQLWNNQLMTLP 175

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IGQ  +L+ L + YN+L ALP  +G++  L+ L +  N +  LP  +  L  L+EL +
Sbjct: 176 EEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSL 235

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L ++P  +     L  + +G+N   L  LP  IG L+ L+ L + +N++  L    
Sbjct: 236 STNRLTTLPNEIGQLQNLQDLYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI 293

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L+ L +  N L   P+ I ++
Sbjct: 294 EQLQNLKSLDLWNNQLTTFPKEIEQL 319



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 122/219 (55%), Gaps = 2/219 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L ++I + L +  LDL   ++  LP  + +L  L+ L L  N L +LP  IG L +L+
Sbjct: 34  MDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLR 93

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N LE LP+ I Q   L+ L + YN+LK LP+ + ++  L+ L +R N +  LPT
Sbjct: 94  VLELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPT 153

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ L +  N+L ++PE +     L  +N+G  +  L ALP  IG L+ L+EL 
Sbjct: 154 EIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLG--YNQLTALPNEIGQLQNLQELY 211

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + +NQ+  LP+    L +L+ L +  N L   P  I ++
Sbjct: 212 LGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQL 250



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  LP+ IG+L +L  L L  N++ A+P  IG L  L++L
Sbjct: 177 EIGQLKNLQTLNLG---YNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQEL 233

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L L SN L++L   I
Sbjct: 234 SLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDI 293

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N L   P  I Q  +L+ L +  N+L  LP+ +G++  L+V  +  N
Sbjct: 294 EQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNN 353

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL +  N+L S
Sbjct: 354 QLTTLPKEIGQLQNLQELYLIDNQLSS 380


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  157 bits (397), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 97/268 (36%), Positives = 160/268 (59%), Gaps = 2/268 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP SIG L +L  LDL+ N + ++P T+G L  + +L  +AN++  +P +IG+  +L
Sbjct: 77  LKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTAL 136

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N ISALP+ + RL ++++L L +N L S+P SIG++  L++L +  N L+ LP
Sbjct: 137 RQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLP 196

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G    L+ L VD N+L+ LP  +G +  L  L +  N I+ LP ++ SL+SL  L +
Sbjct: 197 TELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLIL 256

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P  + + T L  +++  N   + +LP  IG L  L  L+++ N +  LP S 
Sbjct: 257 TDNNLPEIPAEIGYLTNLTFLSLSGN--PITSLPLEIGGLSALRALNLAKNSLISLPVSI 314

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L+ L+VL + EN LE  P +I ++ A
Sbjct: 315 GDLALLQVLHLHENELEALPESIGDLSA 342



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/284 (36%), Positives = 159/284 (55%), Gaps = 12/284 (4%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP +IG L  L  L L +NRI  +PA+IG L+SL  L L  N + E+P  IG L
Sbjct: 212 VNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYL 271

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L +L L GN I++LP+ +  L  L  L+L  N+L SLP SIG L  L+ L +  N+LE
Sbjct: 272 TNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELE 331

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP +IG  S+L +LR+D+N L +LP  VG + +L  L +  N +  LP ++  L+ L+ 
Sbjct: 332 ALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQV 391

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L++  N L  +P  +   T L ++ + +N   L  +P  I +L  L  L +SNN++ VLP
Sbjct: 392 LNLDGNRLSLLPPEVAGMTALRELWVHDN--KLSVVPEGIADLTNLNVLTLSNNELTVLP 449

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRN----------IVEMGAQAV 375
            +   L  L  L +++N L+  P            +V+MG + V
Sbjct: 450 ANMTRLVSLNELWIKDNNLKSHPFRQGLLPNLRVLLVDMGVKVV 493



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 104/257 (40%), Positives = 153/257 (59%), Gaps = 3/257 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           +L DN IE LP SIG L+SL +L L++N +  +PA IG L++L  L L  N I  LP  I
Sbjct: 232 QLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEI 291

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L +L  L+L  N + +LPV++  L  L+ L L  N L +LP+SIG L +L  L ++ N
Sbjct: 292 GGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHN 351

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           +L  LP  +G  SSL EL +D N+L  LP ++G++  L+VL++  N +  LP  ++ +++
Sbjct: 352 NLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPPEVAGMTA 411

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LREL V  N+L  VPE +   T L  + + NN  +L  LP ++  L  L EL I +N ++
Sbjct: 412 LRELWVHDNKLSVVPEGIADLTNLNVLTLSNN--ELTVLPANMTRLVSLNELWIKDNNLK 469

Query: 339 VLPDSFRMLSRLRVLRV 355
             P    +L  LRVL V
Sbjct: 470 SHPFRQGLLPNLRVLLV 486



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 155/268 (57%), Gaps = 2/268 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP  IG+L+ +  L L+ NR+ ++PA+IG ++ L++L+L  N +  LP  +G++  L
Sbjct: 146 ISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKL 205

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  NQ+  LP  +  L +L EL LG N + +LP SIGSL SL  LI+  N+L E+P
Sbjct: 206 KTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIP 265

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG  ++L  L +  N + +LP  +G +  L  L++  N++  LP ++  L+ L+ L +
Sbjct: 266 AEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALLQVLHL 325

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             NELE++PES+   + L  + + +N  +L +LP  +G +  L EL +  NQ+  LP S 
Sbjct: 326 HENELEALPESIGDLSALTDLRLDHN--NLTSLPPEVGVMSSLTELLLDGNQLNTLPLSI 383

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L+ L+VL +  N L + P  +  M A
Sbjct: 384 GRLTELQVLNLDGNRLSLLPPEVAGMTA 411



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/262 (35%), Positives = 151/262 (57%), Gaps = 3/262 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP SIG LSSL +L +  N+I  +P +IG L++++ L L  N++  LP+  GD+ 
Sbjct: 6   NQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMT 65

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +LV L +  N +  LP ++  L  L  LDL  N L SLP ++G L  + +L    N L  
Sbjct: 66  ALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTT 125

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P TIG+C++LR+L + +N + ALP  +G++  ++ L +  N +  +P ++ +++ L+EL
Sbjct: 126 VPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQEL 185

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++  N L+ +P  L     L  + +  N   LR LP +IG L  L EL + +N+I  LP 
Sbjct: 186 NLFENPLKGLPTELGNIQKLKTLVVDVN--QLRTLPATIGALGQLRELQLGDNRIENLPA 243

Query: 343 SFRMLSRLRVLRVQENPL-EVP 363
           S   L+ L  L + +N L E+P
Sbjct: 244 SIGSLTSLNTLILTDNNLPEIP 265



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 104/311 (33%), Positives = 164/311 (52%), Gaps = 8/311 (2%)

Query: 86  VSSKKGTRDLNLQNKLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           + +  GT  L  +  L +N ++ LP  +G +  L +L +  N++  +PATIG L  L++L
Sbjct: 172 IPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLREL 231

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NRI  LP SIG L SL  L L  N +  +P  +  L  L  L L  N ++SLP  I
Sbjct: 232 QLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEI 291

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP +IG  + L+ L +  N L+ALPE++G +  L  L + +N
Sbjct: 292 GGLSALRALNLAKNSLISLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHN 351

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           N+  LP  +  +SSL EL +  N+L ++P S+   T L  +N+  N   L  LP  +  +
Sbjct: 352 NLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGN--RLSLLPPEVAGM 409

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
             L EL + +N++ V+P+    L+ L VL +  N L V P N+  +     V      ++
Sbjct: 410 TALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTVLPANMTRL-----VSLNELWIK 464

Query: 385 KRDAKTQPVKQ 395
             + K+ P +Q
Sbjct: 465 DNNLKSHPFRQ 475



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 145/247 (58%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           + +++N+IV +PA+IG LSSL  L +  N+I ELP SIG L ++  L L  NQ+++LP  
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
              +  L  L +  N L  LP SIG+L +L+ L +  N L  LP T+G    + EL+ + 
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNA 120

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  +P  +G+   L  L + +N I  LP  +  L+ +++L ++ N L+S+P S+   T
Sbjct: 121 NQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMT 180

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++N+  N   L+ LP  +GN++ L+ L +  NQ+R LP +   L +LR L++ +N +
Sbjct: 181 LLQELNLFEN--PLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRI 238

Query: 361 EVPPRNI 367
           E  P +I
Sbjct: 239 ENLPASI 245



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 136/241 (56%), Gaps = 2/241 (0%)

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N+I+ LP SIG L SL  L +  NQIS LP ++ +L  ++ L L  N L+SLP+  G + 
Sbjct: 6   NQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMT 65

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +L  L +  N L+ LP +IG   +LR L +++N L++LP+ VG +  +  L    N +  
Sbjct: 66  ALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTT 125

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +PTT+   ++LR+LD+SFN + ++P  +   T + ++ + NN  D  ++P SIG + +L+
Sbjct: 126 VPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLD--SIPASIGTMTLLQ 183

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           EL++  N ++ LP     + +L+ L V  N L   P  I  +G    +Q   + +E   A
Sbjct: 184 ELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPA 243

Query: 389 K 389
            
Sbjct: 244 S 244



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 110/204 (53%), Gaps = 5/204 (2%)

Query: 84  IEVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           +E+      R LNL +N L+     LP SIG L+ L  L L EN + A+P +IG LS+L 
Sbjct: 289 LEIGGLSALRALNLAKNSLIS----LPVSIGDLALLQVLHLHENELEALPESIGDLSALT 344

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L L  N +  LP  +G + SL  L L GNQ++ LP+++ RL  L+ L+L  N LS LP 
Sbjct: 345 DLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPP 404

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            +  + +L++L V  N L  +P  I   ++L  L +  N L  LP  + ++ +L  L ++
Sbjct: 405 EVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSNNELTVLPANMTRLVSLNELWIK 464

Query: 263 YNNIKQLPTTMSSLSSLRELDVSF 286
            NN+K  P     L +LR L V  
Sbjct: 465 DNNLKSHPFRQGLLPNLRVLLVDM 488


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 169/286 (59%), Gaps = 6/286 (2%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +L  +IE ++++G  +L+L  K +  I   P+ IG+L++L  LDL EN+I  +P  IG L
Sbjct: 6   ELLEIIEKAAREGVTELDLSGKGITEI---PECIGQLTNLQELDLRENQITEIPECIGQL 62

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           ++LKKL +  N+I E+P  I  L +L +L L  NQI+ +P  + +L  L++L L +N ++
Sbjct: 63  TNLKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQIT 122

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +P  IG L +L+ L +  N + E+P  I Q ++L+ L +  N++  +PE +G++  L+ 
Sbjct: 123 EIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQN 182

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I ++P  +  L++L+ L ++ N++  +PE +   T L  +  G N   +  +P
Sbjct: 183 LVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGN--QITEMP 240

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
             IG L  L+ L++  NQI  +P+    L+ L++L + +N + E+P
Sbjct: 241 ECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIP 286



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 161/277 (58%), Gaps = 2/277 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ IG+L++L  L LS N+I  +P  IG L++L+ L L  N+I E+P+ I  L +L  L
Sbjct: 101 IPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNL 160

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+I+ +P  + +L  L+ L L  N ++ +P+ IG L +L+ L +  N + E+P  I
Sbjct: 161 YLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFI 220

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ ++L+ L    N++  +PE +G+++ L++L++  N I ++P  +  L++L+ L++  N
Sbjct: 221 GKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKN 280

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  +PE +     L ++++ +N   +  +P  IG L  L+EL ++ NQI  +P+    L
Sbjct: 281 QITEIPECIGQLNNLQELDLDDN--KITEIPECIGQLINLQELSLTENQITEIPECIGQL 338

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
           + L+ L +  NPL    R+  + G   +  Y+  + E
Sbjct: 339 TNLQKLILDNNPLNPVVRSAYQSGLDELKAYLKSIQE 375



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 136/236 (57%), Gaps = 13/236 (5%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ I +L++L +L L +N+I  +P  IG L++L+ L L  N+I E+P+ IG L +L  L
Sbjct: 147 IPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIPEFIGKLTNLQNL 206

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQI+ +P  + +L  L+ L  G N ++ +P+ IG L +L+ L +  N + E+P  I
Sbjct: 207 GLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQILNLWKNQITEMPECI 266

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L +  N++  +PE +G+++ L+ L +  N I ++P  +  L +L+EL ++ N
Sbjct: 267 GQLNNLQILNLWKNQITEIPECIGQLNNLQELDLDDNKITEIPECIGQLINLQELSLTEN 326

Query: 288 ELESVPESLCFATTLVKMNIGNN-------------FADLRALPRSIGNLEMLEEL 330
           ++  +PE +   T L K+ + NN               +L+A  +SI   E  EE 
Sbjct: 327 QITEIPECIGQLTNLQKLILDNNPLNPVVRSAYQSGLDELKAYLKSIQEPEQREEF 382



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 47/135 (34%), Positives = 78/135 (57%), Gaps = 5/135 (3%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +L + N   + I  +P+ IG+L++L  L+L +N+I  +P  IG L++L++LDL  N+I E
Sbjct: 248 NLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLNNLQELDLDDNKITE 307

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL-----SSLPDSIGSLI 208
           +P+ IG L++L  L L  NQI+ +P  + +L  L++L L +N L     S+    +  L 
Sbjct: 308 IPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPLNPVVRSAYQSGLDELK 367

Query: 209 SLKKLIVETNDLEEL 223
           +  K I E    EE 
Sbjct: 368 AYLKSIQEPEQREEF 382



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 2/103 (1%)

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I ++P  +  L++L+ELD+  N++  +PE +   T L K+ IG N   +  +P  I  L
Sbjct: 28  GITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKN--KITEIPGCISQL 85

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             L  L +  NQI  +P+    L+ L+ L +  N +   P+ I
Sbjct: 86  TNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFI 128


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 325 QRLQTLYLGNNQLNFLPNKVEQL 347



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408



 Score = 51.6 bits (122), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + + +LP+ + +L +L SLDL  N++ A+P  IG L  L+ L+L  N++  LP+ I  L 
Sbjct: 335 NQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLK 394

Query: 163 SLVYLDLRGNQISALPVALSR 183
           +L  L L  N + +  +A  R
Sbjct: 395 NLKKLYLHNNPLPSEKIARIR 415


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 192

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 193 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 252

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 253 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 310

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 311 QRLQTLYLGNNQLNFLPNKVEQL 333



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 168 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 227

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 228 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 287

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 288 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 345

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 346 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 382

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 383 KKLYLHNNPL 392



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 183 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 242

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 243 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 302

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 303 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 362

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 363 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 394


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L +L+L  N++  +P  IG L +L+ LDL  N+++ LP  I  L +L  L
Sbjct: 84  LPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL +N L +LP+ IG L +L+ L +  N L  LP  I
Sbjct: 144 GLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEI 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +LREL +  N+LK LP+ +G++  L+ L +  N +  LP  +  L +L EL +  N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L  +++ NN   L  LP+ IG L+ L EL +  NQ   LP   R L
Sbjct: 264 LLTTLPKEVGQLKNLPTLDLSNN--RLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQL 321

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+VL +  N L+  P  I ++
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKL 344



 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/286 (35%), Positives = 162/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  LP+ IG+L +L +LDL  N++V +P  I  L +L+ L
Sbjct: 87  EIGQLKNLQTLNLD---TNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  LDL  NQ+ ALP  + +L  L+ LDL  N L+ LP  I
Sbjct: 144 GLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L + +N L+ LP  IGQ  +L+ L +  N+L  LP  +G++  L  L +  N
Sbjct: 204 GQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  LD+S N L ++P+ +     L ++ +G N     ALP+ I  L
Sbjct: 264 LLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTN--QFTALPKEIRQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L ++NNQ++ LP+    L  L+VL + +N L+  P+ I ++
Sbjct: 322 QNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKL 367



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/266 (34%), Positives = 150/266 (56%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L +L L  N++  +P  IG L +L+ L+L  N++  LP+ IG L++L
Sbjct: 58  LKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTNQLTTLPNEIGQLINL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQ+  LP  +++L  L  L L +N L  LP  IG L +L+ L +  N L+ LP
Sbjct: 118 QTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +L+ L +  N L  LP+ +G++  L  L +  N +K LP  +  L +L+ L +
Sbjct: 178 NEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+L ++P  +     L ++ +G N   L  LP+ +G L+ L  LD+SNN++  LP   
Sbjct: 238 SDNQLTTLPNEIGQLKNLYELYLGKNL--LTTLPKEVGQLKNLPTLDLSNNRLTTLPKEI 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  LR L +  N     P+ I ++
Sbjct: 296 GQLKNLRELYLGTNQFTALPKEIRQL 321



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 143/253 (56%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L LS N++  +P  IG L +L+ LDL+AN++  LP+ IG L +L  L
Sbjct: 130 LPKEINQLQNLRVLGLSNNQLKILPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N ++ LP  + +L  L EL L SN L +LP  IG L +L+ L +  N L  LP+ I
Sbjct: 190 DLSKNILTILPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L EL +  N L  LP+ VG++  L  L +  N +  LP  +  L +LREL +  N
Sbjct: 250 GQLKNLYELYLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  ++P+ +     L  + + NN   L+ LP  I  L+ L+ LD+++NQ++ LP     L
Sbjct: 310 QFTALPKEIRQLQNLQVLFLNNN--QLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKL 367

Query: 348 SRLRVLRVQENPL 360
             L+ L +Q N L
Sbjct: 368 QNLQRLYLQYNQL 380



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/184 (38%), Positives = 108/184 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L L  N++  LP+ IG L +L  L
Sbjct: 199 LPKEIGQLKNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYEL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP  + +L  L  LDL +N L++LP  IG L +L++L + TN    LP  I
Sbjct: 259 YLGKNLLTTLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L ++ N+LK LP  + K+  L+VL +  N +K LP  +  L +L+ L + +N
Sbjct: 319 RQLQNLQVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYN 378

Query: 288 ELES 291
           +L S
Sbjct: 379 QLSS 382



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 124/218 (56%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L L +N L++LP+ IG L +L+ 
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQT 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L ++TN L  LP+ IGQ  +L+ L + +N+L  LP+ + ++  L VL +  N +K LP  
Sbjct: 97  LNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ LD+  N+L+++P  +     L  +++  N   L  LP+ IG L+ L EL +
Sbjct: 157 IGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNI--LTILPKEIGQLKNLRELYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ++ LP     L  L+ L + +N L   P  I ++
Sbjct: 215 SSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQL 252


>gi|374990821|ref|YP_004966316.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
 gi|297161473|gb|ADI11185.1| small GTP-binding protein domain-containing protein [Streptomyces
           bingchenggensis BCW-1]
          Length = 370

 Score =  157 bits (397), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 156/265 (58%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD +G L+ L  L LS+NR+  +P ++G LS+L +  L+ NR+ ++P  +  L  L  L
Sbjct: 70  VPDFLGDLTGLTHLSLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDL 129

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+++ LP  L  L +L  LD+GSN +S++P S+G L +L +L +  N L E+P T+
Sbjct: 130 ALRDNKLTELPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTL 189

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ ++L EL +D+NRL  LP ++G++  L  L +  N + +LP  +S L++LR L++  N
Sbjct: 190 GKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRN 249

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P      T L  +N+G  F  L ALP ++G L  L  L +  N++  LP S   L
Sbjct: 250 ELTELPPWAGGFTALTGINLG--FNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGL 307

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
           + L  L + +N L   P  + ++ A
Sbjct: 308 TALTSLDLGDNELTDLPAWVGDLPA 332



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 138/231 (59%), Gaps = 8/231 (3%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            NKL +    LP+ +G L  L SLD+  NRI AVP+++G L++L +LDL  NR++E+P +
Sbjct: 133 DNKLTE----LPEFLGGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRT 188

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G L +L  L+L  N+++ LP +L  L  L  L LGSN L+ LP  +  L +L+ L ++ 
Sbjct: 189 LGKLTALTELNLDFNRLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDR 248

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N+L ELP   G  ++L  + + +NRL ALPE +G +  L  LS+R N + +LP +M+ L+
Sbjct: 249 NELTELPPWAGGFTALTGINLGFNRLTALPETLGGLTALTSLSLRGNRLTELPASMAGLT 308

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEML 327
           +L  LD+  NEL  +P  +     L  + + GN F+     PR + + E L
Sbjct: 309 ALTSLDLGDNELTDLPAWVGDLPALTSLRLDGNRFSH---APRWLADHERL 356



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 148/271 (54%), Gaps = 3/271 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
            L DN +E LP+S+G LS+L    L+ NR+  +P  +  L+ L  L L  N++ ELP+ +
Sbjct: 84  SLSDNRLEELPESLGNLSALTEFVLNGNRLAQIPIWVRQLTELTDLALRDNKLTELPEFL 143

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L  L  LD+  N+ISA+P +L  L  L ELDL  N L  +P ++G L +L +L ++ N
Sbjct: 144 GGLKKLASLDVGSNRISAVPSSLGDLAALSELDLSGNRLVEIPRTLGKLTALTELNLDFN 203

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L ELP ++G+ ++L  L +  NRL  LP  +  +  L  L++  N + +LP      ++
Sbjct: 204 RLAELPASLGELANLSHLLLGSNRLTRLPAELSGLTALRWLNLDRNELTELPPWAGGFTA 263

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  +++ FN L ++PE+L   T L  +++  N   L  LP S+  L  L  LD+ +N++ 
Sbjct: 264 LTGINLGFNRLTALPETLGGLTALTSLSLRGN--RLTELPASMAGLTALTSLDLGDNELT 321

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
            LP     L  L  LR+  N     PR + +
Sbjct: 322 DLPAWVGDLPALTSLRLDGNRFSHAPRWLAD 352


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 154/262 (58%), Gaps = 2/262 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP SIG+L +L  LDL   ++  +P  +G L +L+ L+L AN++ ELP SIG L +L
Sbjct: 117 IKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQAL 176

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
              DL  N++  LP   S+L +LEEL L +N LS LP + G L++LK L++  N L++LP
Sbjct: 177 KMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLP 236

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            ++GQ   L  L +  N L  LP  +G++ +L  L +  N ++QLP  +  L +L+ L +
Sbjct: 237 ASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFI 296

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + NEL+ +P        L ++ +  N   L ALPR+ G L  LEEL +S N++  LP S 
Sbjct: 297 TENELQQLPAEFAQLKNLQELQLQEN--KLTALPRNFGKLSQLEELQLSENKLEALPKSI 354

Query: 345 RMLSRLRVLRVQENPLEVPPRN 366
           + L +L  L +  N + + P+N
Sbjct: 355 KRLKKLSSLNLSNNEIYLFPKN 376



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 147/261 (56%), Gaps = 3/261 (1%)

Query: 108 LPDSIGKLSSLVSLDL-SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LP +IG+ S L  L L  +  +  +P  IG L +L+ L L++  I  LP SIG L +L  
Sbjct: 73  LPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRI 132

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LDL   Q+  LP  L +L  LE L+L +N L  LP SIG L +LK   + +N L+ELP+ 
Sbjct: 133 LDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNE 192

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
             Q + L EL ++ N L  LP   G +  L+ L +  N + QLP ++  L  L  L++  
Sbjct: 193 FSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQD 252

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L  +P  +    +LV++++ +NF  L+ LP  IG L+ L+ L I+ N+++ LP  F  
Sbjct: 253 NDLGQLPAQIGQLQSLVELDLSDNF--LQQLPPEIGQLQALKSLFITENELQQLPAEFAQ 310

Query: 347 LSRLRVLRVQENPLEVPPRNI 367
           L  L+ L++QEN L   PRN 
Sbjct: 311 LKNLQELQLQENKLTALPRNF 331



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/291 (34%), Positives = 153/291 (52%), Gaps = 25/291 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVA-----------------------VPATIGGLS 139
           + +E LP SIG+L +L   DLS NR+                         +P+  GGL 
Sbjct: 161 NQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLV 220

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK L L  N++ +LP S+G L  L  L+L+ N +  LP  + +L  L ELDL  N L  
Sbjct: 221 ALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQ 280

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG L +LK L +  N+L++LP    Q  +L+EL++  N+L ALP   GK+  LE L
Sbjct: 281 LPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEEL 340

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N ++ LP ++  L  L  L++S NE+   P++      L+ +++  N+  +  LP 
Sbjct: 341 QLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPKNASGIKNLIALDLEGNY--IEELPE 398

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            I  L+ LE L + +N++R LP   + LS LR L + +N  E  P  + +M
Sbjct: 399 EIQELQNLEFLILYDNELRNLPPYLQDLSALRRLDISDNEFEAFPEVLYQM 449



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 141/272 (51%), Gaps = 21/272 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+   +L+ L  L L  N +  +P+  GGL +LK L L  N++ +LP S+G L 
Sbjct: 184 NRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLK 243

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L+ N +  LP  + +L  L ELDL  N L  LP  IG L +LK L +  N+L++
Sbjct: 244 QLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQ 303

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP    Q  +L+EL++  N+L ALP   GK+  LE L +  N ++ LP ++  L  L  L
Sbjct: 304 LPAEFAQLKNLQELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSL 363

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFAD---------------------LRALPRSI 321
           ++S NE+   P++      L+ +++  N+ +                     LR LP  +
Sbjct: 364 NLSNNEIYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYL 423

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            +L  L  LDIS+N+    P+    + +L+ L
Sbjct: 424 QDLSALRRLDISDNEFEAFPEVLYQMRQLKDL 455



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/196 (35%), Positives = 108/196 (55%), Gaps = 4/196 (2%)

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL-ISLKKLIVETNDLEELPHTIGQCSS 232
           +SA P   ++ V+ + LDL         + +  L IS + L++E  +L  LP TIGQ S 
Sbjct: 23  MSAAPSGQAKAVKEQYLDLEDGRRLLQAERLADLDISYQALVLEEEELSSLPATIGQYSE 82

Query: 233 LRELRV-DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           LR L +     L+ LPE +G++  LEVL +    IK+LP ++  L +LR LD+   +L+ 
Sbjct: 83  LRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQ 142

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +PE L     L  +N+  N   L  LP SIG L+ L+  D+S+N+++ LP+ F  L++L 
Sbjct: 143 LPEGLGQLQALEALNLSAN--QLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLE 200

Query: 352 VLRVQENPLEVPPRNI 367
            L ++ N L   P N 
Sbjct: 201 ELALENNLLSFLPSNF 216


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPEEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 325 QRLQTLYLGNNQLNFLPNKVEQL 347



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 135/250 (54%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP+ IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP       
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           + IG L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 257 NLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+++   + +  LD+ +NR+  VP  +   ++L KL+L  N++ ELP  +G L  L +L
Sbjct: 135 LPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHL 194

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N +  LP  +  L  L EL+L  N L +LPDS+ +L  L  L +  N L  LP +I
Sbjct: 195 NLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESI 254

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L  L    NRL +LPE++G +  L  LS+ +N + +LP   S L  L  LD+S+N
Sbjct: 255 GALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYN 314

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +C  + L  +++ +N  +L  LP  IG L  LE LD+SNN +  LPDS   L
Sbjct: 315 NLMTLPDFVCNFSRLTNLHLAHN--ELTMLPMHIGYLGELEILDVSNNDLGSLPDSVAKL 372

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L  L +  N +   P+ I  +
Sbjct: 373 DKLTTLNLSGNQIPFLPKFIANL 395



 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 148/256 (57%), Gaps = 2/256 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +   ++L  L+L+ N++  +PA +G L+ L  L+L AN + +LPD IG+L +L  L
Sbjct: 158 VPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTEL 217

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ+  LP +LS L +L  LD+G N L++LP+SIG+L +L  L    N L  LP +I
Sbjct: 218 ELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESI 277

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L + +N+L  LPE    +  L  L + YNN+  LP  + + S L  L ++ N
Sbjct: 278 GNLQRLSCLSLAHNKLTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHN 337

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P  + +   L  +++ NN  DL +LP S+  L+ L  L++S NQI  LP     L
Sbjct: 338 ELTMLPMHIGYLGELEILDVSNN--DLGSLPDSVAKLDKLTTLNLSGNQIPFLPKFIANL 395

Query: 348 SRLRVLRVQENPLEVP 363
           + L +L V+   ++VP
Sbjct: 396 THLCILDVRNTRMKVP 411



 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 148/257 (57%), Gaps = 2/257 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P    +L+ L  LDLS  R+ ++P  IG L  L +LDL  N +  LP+SIG+L  L  L
Sbjct: 43  IPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRL 102

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL+ N++ ALP +L  L RL +L+ G N L+ LP+++     + +L +  N L  +PH +
Sbjct: 103 DLKWNRLEALPNSLKNLTRLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYL 162

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++L +L +  N+L+ LP  +GK+  L  L++  N +KQLP  +  L++L EL++  N
Sbjct: 163 SNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGN 222

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+SL     L  ++IG N   L  LP SIG LE L  LD  NN++  LP+S   L
Sbjct: 223 QLGTLPDSLSNLHQLYHLDIGGNL--LTTLPESIGALENLSVLDAHNNRLTSLPESIGNL 280

Query: 348 SRLRVLRVQENPLEVPP 364
            RL  L +  N L   P
Sbjct: 281 QRLSCLSLAHNKLTRLP 297



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LPD+IG L  L  LDL  N +  +P +IG L+ LK+LDL  NR+  LP+S+ +L  L
Sbjct: 63  LQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRL 122

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+   NQ++ LP  L+   ++ ELD+G N L+ +P  + +  +L KL +  N LEELP
Sbjct: 123 SKLEFGYNQLTRLPETLAGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELP 182

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G+ + L  L +  N LK LP+ +G++  L  L +  N +  LP ++S+L  L  LD+
Sbjct: 183 AFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDI 242

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L ++PES+     L  ++  NN   L +LP SIGNL+ L  L +++N++  LP+  
Sbjct: 243 GGNLLTTLPESIGALENLSVLDAHNN--RLTSLPESIGNLQRLSCLSLAHNKLTRLPEQT 300

Query: 345 RMLSRLRVLRVQENPLEVPP 364
             L RL  L +  N L   P
Sbjct: 301 SHLLRLSTLDLSYNNLMTLP 320



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 132/237 (55%), Gaps = 2/237 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP  +GKL+ L  L+LS N +  +P  IG L++L +L+L+ N++  LPDS+ +L 
Sbjct: 176 NQLEELPAFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLH 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +LD+ GN ++ LP ++  L  L  LD  +N L+SLP+SIG+L  L  L +  N L  
Sbjct: 236 QLYHLDIGGNLLTTLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLTR 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP        L  L + YN L  LP+ V     L  L + +N +  LP  +  L  L  L
Sbjct: 296 LPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGELEIL 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           DVS N+L S+P+S+     L  +N+  N   +  LP+ I NL  L  LD+ N +++V
Sbjct: 356 DVSNNDLGSLPDSVAKLDKLTTLNLSGN--QIPFLPKFIANLTHLCILDVRNTRMKV 410



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 81/152 (53%), Gaps = 4/152 (2%)

Query: 215 VETNDLEE--LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
            E N++ E  +P    + + L  L + + RL++LP+ +G +  L  L +R N ++ LP +
Sbjct: 33  AEENNIGEDRIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPES 92

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           + +L+ L+ LD+ +N LE++P SL   T L K+  G  +  L  LP ++     + ELDI
Sbjct: 93  IGNLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEFG--YNQLTRLPETLAGFTQITELDI 150

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            +N++  +P      + L  L +  N LE  P
Sbjct: 151 GDNRLTRVPHYLSNFTNLTKLNLARNQLEELP 182



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 27/117 (23%)

Query: 264 NNIKQ--LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           NNI +  +P   S L+ L  LD+SF  L+S+P+                         +I
Sbjct: 36  NNIGEDRIPRDASELAGLGRLDLSFRRLQSLPD-------------------------NI 70

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
           G+L  L ELD+  N++  LP+S   L+ L+ L ++ N LE  P ++  +   + +++
Sbjct: 71  GDLIHLTELDLRGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEF 127


>gi|82780768|gb|ABB90553.1| leucine-rich repeat protein 2 [Triticum aestivum]
          Length = 362

 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 147/261 (56%), Gaps = 5/261 (1%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
           KKLD+    +  +P     L  +  LDL  N + ++P ++ +RL+++  LD+ SN L SL
Sbjct: 42  KKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLKVVVLDVRSNQLKSL 101

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  L+ L V  N L+ LP TI +C +L EL  ++N+L  LP+ +G ++H+L  L
Sbjct: 102 PNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELNANFNQLTRLPDTLGFELHSLRRL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP + S +++LR LD   N + ++PE L     L  +N+  NF  LR LP 
Sbjct: 162 SVNSNKLTSLPFSTSHMTALRALDARLNCIRALPEGLENLVNLEVLNVSQNFHFLRELPY 221

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +G L  L ELDIS N I VLPDS   L++L       NPL  PP +IVE    A+  Y+
Sbjct: 222 GLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFSAVGNPLVCPPMDIVEQSLDAMRTYL 281

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +    + +      K+KK W+
Sbjct: 282 S---SRMNGTGVNAKKKKGWL 299


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 148/261 (56%), Gaps = 2/261 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LD+S N++V +P  I  L +LK L L  N++  LP  IG L +L  L
Sbjct: 214 LPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLENLDSL 273

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  +  L +L+ L+L +N L +LP  IG+L  L+ L +E N L  LP  I
Sbjct: 274 ILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAALPQEI 333

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L +  NRLK LP+ + K+  LE L + + ++  LP  + +L  L+ L +S N
Sbjct: 334 DQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKLQRLFLSNN 393

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+++P+ +     L  + + NN   L +LP+ I  L+ LE LD+SNNQ+R LP+    L
Sbjct: 394 RLKTLPKEIWKLRKLEWLYLKNN--KLGSLPKEIDQLQNLEYLDLSNNQLRTLPNEIGQL 451

Query: 348 SRLRVLRVQENPLEVPPRNIV 368
             L  L +  NP    P+ IV
Sbjct: 452 QSLEDLDLSGNPFTTFPQEIV 472



 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/260 (38%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L+L  N++  +   IG L  L+ L L  NR+  LP+ IG L  L +L
Sbjct: 53  LPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ L   +  L +LE L L +N L+ LP  IG L  L+KL +  N L  LP+ I
Sbjct: 113 NLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL+ L +  NRLK LP+ + K+  L+ L +  N  + LP  +  L +L +LDVS N
Sbjct: 173 GQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNN 232

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L  + + +N   L  LP+ IG LE L+ L +SNNQ+  LP     L
Sbjct: 233 QLVTLPNEIWKLQNLKWLYLDDN--QLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTL 290

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L+ L +  N L   P+ I
Sbjct: 291 QKLQYLNLSNNQLRTLPQEI 310



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/284 (34%), Positives = 147/284 (51%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL  L  LDLS+N++  +P  IG L SL+ L L  NR+  LP  I  L  L  L
Sbjct: 145 LPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRL 204

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ   LP  + +L  LE+LD+ +N L +LP+ I  L +LK L ++ N L  LP  I
Sbjct: 205 YLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEI 264

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +  N+L  LP+ +G +  L+ L++  N ++ LP  + +L  L  L++  N
Sbjct: 265 GQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHN 324

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
           +L ++P+ +     L  +N+ NN                      A L  LP  IG L+ 
Sbjct: 325 QLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQK 384

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L +SNN+++ LP     L +L  L ++ N L   P+ I ++
Sbjct: 385 LQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQL 428



 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG L  L  L L  N++  +P  IG L  L+KLDL  N++  LP+ IG L SL YL
Sbjct: 122 LVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYL 181

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++  LP  + +L +L+ L LG N   +LP  I  L +L+ L V  N L  LP+ I
Sbjct: 182 SLVNNRLKTLPKEIWKLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEI 241

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  + +L  L+ L++S N
Sbjct: 242 WKLQNLKWLYLDDNQLTVLPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNN 301

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L ALP+ I  L+ LE+L++SNN+++ LP     L
Sbjct: 302 QLRTLPQEIGTLQELEWLNLEHN--QLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKL 359

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            RL  L ++   L   P  I
Sbjct: 360 QRLEWLYLEHAHLTTLPNEI 379


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 12/274 (4%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N++WL          P  IG+L  L  LDL  N++  +P  IG L +L  L L  N++
Sbjct: 70  LKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQL 129

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  IG L +L +L+L  NQ + LP    +L  L++L LG N   +LP  IG L +L+
Sbjct: 130 TALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQ 189

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N    LP    Q  +L  L + YN+L  LP+ + ++  L  L +  N +  LP 
Sbjct: 190 ELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPK 249

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L  L+ LD+ +N+L ++P+ +     L  + +GNN   L ALP+ IG L+ L+EL+
Sbjct: 250 EIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNN--QLTALPKEIGQLKNLQELN 307

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           + NNQ+  LP     L  L+ L ++ N   +  +
Sbjct: 308 LWNNQLTTLPIEIGQLQNLQTLYLRNNQFSIEEK 341



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           L E ++  VP  I  L +L+ L L+ N++  LP  IG L  L +LDL  NQ++ LP  + 
Sbjct: 55  LREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKEIG 114

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L  L LG N L++LP  IG L +L+ L ++ N    LP    Q  SL++L + YN+
Sbjct: 115 QLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQ 174

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
            K LP+ +G++  L+ L +  N    LP     L +L  L++ +N+L ++P+ +     L
Sbjct: 175 FKTLPKEIGQLKNLQELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNL 234

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + + NN   L ALP+ IG L  L+ LD+  NQ+  LP     L  L+ L +  N L  
Sbjct: 235 HTLYLNNN--QLTALPKEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTA 292

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 293 LPKEIGQL 300



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 25/218 (11%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           EL  ++ + L +  L LR  ++  +P  + +L  L+ L L +N L+ LP  IG L  L+ 
Sbjct: 39  ELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHDLQW 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L ++ N L  LP  IGQ  +L  L + YN+L ALP+ +G++  L+ L++  N    LP  
Sbjct: 99  LDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTLPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
              L SL++L + +N+                          + LP+ IG L+ L+EL +
Sbjct: 159 FEQLQSLQKLTLGYNQ-------------------------FKTLPKEIGQLKNLQELYL 193

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++NQ  +LP  F  L  L VL +  N L   P+ I ++
Sbjct: 194 NDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQL 231


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 132

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 133 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 192

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 193 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 252

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 253 KLTTLPKEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 310

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L V P  + ++
Sbjct: 311 QRLQTLYLGNNQLNVLPNKLEQL 333



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 168 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 227

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP  IG L +L+KL +  N L  LP  IGQ 
Sbjct: 228 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQL 287

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 288 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQ-- 345

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 346 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 382

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 383 KKLYLHNNPL 392



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG   
Sbjct: 183 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 242

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 243 NLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 302

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 303 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 362

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 363 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 394


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/284 (35%), Positives = 161/284 (56%), Gaps = 7/284 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +  ++LNL +NKL      LP  IG L  L  LDL  N+I  +P  IG L SL++
Sbjct: 55  EIGKLQNLQELNLWENKLTT----LPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQE 110

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N++  LP  IG+L  L  L L  NQ +ALP  + +L  L+E++   N L++LP  
Sbjct: 111 LNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKE 170

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L +L++L +  N L  LP  IG   +L++L ++ N+L ALP  +G +  L+ L +  
Sbjct: 171 IGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNR 230

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  + +L +L+ L++  N+L ++P+ +     L  +++GNN   L ALP  IGN
Sbjct: 231 NQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNN--KLTALPIEIGN 288

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L+ L ++ NQ+  +P     L  L+ L +  N L   P+ I
Sbjct: 289 LQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEI 332



 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 148/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L+L EN++  +P  IG L  L+KLDL  N+I  LP  IG L SL  L
Sbjct: 52  LPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQEL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  +  L  L+ L LG N  ++LP+ IG L +L+++    N L  LP  I
Sbjct: 112 NLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL ++ N+L ALP  +G +  L+ L +  N +  LP  + +L +L++L ++ N
Sbjct: 172 GNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L  +N+  N   L  LP+ I  L+ L+ L + NN++  LP     L
Sbjct: 232 QLTALPIEIGNLQNLQGLNLDKN--QLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNL 289

Query: 348 SRLRVLRVQENPLEVPPRNI 367
            +L+ L + +N L   P+ I
Sbjct: 290 QKLKWLGLNKNQLTTIPKEI 309



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/275 (34%), Positives = 155/275 (56%), Gaps = 5/275 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL     + +  LP  IG L  L  L L  N+  A+P  IG L +L+++
Sbjct: 101 EIGQLQSLQELNLS---FNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEM 157

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +   N++  LP  IG+L +L  L L  NQ++ALP+ +  L  L++L L  N L++LP  I
Sbjct: 158 ESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEI 217

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L +L+KL++  N L  LP  IG   +L+ L +D N+L  LP+ + K+  L+ L +  N
Sbjct: 218 GNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNN 277

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  + +L  L+ L ++ N+L ++P+ +     L ++N+ +N   L  +P+ I NL
Sbjct: 278 KLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSN--QLTTIPKEIENL 335

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + LE LD+ NNQ+  LP     L  L+ L +  NP
Sbjct: 336 QKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGNP 370



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 147/260 (56%), Gaps = 5/260 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  ++ A+P  IG L +L++L+L  N++  LP  IG+L  L  LDL  N+I+ LP  
Sbjct: 42  LYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKITVLPKE 101

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL+L  N L++LP  IG+L  LK+L +  N    LP  IG+  +L+E+    
Sbjct: 102 IGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSK 161

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G +  L+ L +  N +  LP  + +L +L++L ++ N+L ++P  +    
Sbjct: 162 NQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQ 221

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+ +  N   L ALP  IGNL+ L+ L++  NQ+  LP   R L  L+ L +  N L
Sbjct: 222 NLQKLVLNRN--QLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKL 279

Query: 361 EVPPRNIVEMGAQAVVQYMA 380
              P   +E+G    ++++ 
Sbjct: 280 TALP---IEIGNLQKLKWLG 296



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 128/229 (55%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ L L+  ++  LP+ IG L +L  L+L  N+++ LP  +  L  L++LDLG N ++
Sbjct: 37  TQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLDLGFNKIT 96

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L SL++L +  N L  LP  IG    L+ L +  N+  ALPE +GK+  L+ 
Sbjct: 97  VLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQE 156

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           +    N +  LP  + +L +L+EL ++ N+L ++P  +     L K+ +  N   L ALP
Sbjct: 157 MESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRN--QLTALP 214

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             IGNL+ L++L ++ NQ+  LP     L  L+ L + +N L   P+ I
Sbjct: 215 IEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEI 263



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 116/225 (51%), Gaps = 8/225 (3%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +  L     S L  AL    ++  L L    L++LP+ IG L +L++L +  N L  LP 
Sbjct: 18  FYKLDAEDYSKLNEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQ 77

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG    L++L + +N++  LP+ +G++ +L+ L++ +N +  LP  + +L  L+ L + 
Sbjct: 78  EIGNLQYLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLG 137

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+  ++PE +     L +M    N   L  LP+ IGNL+ L+EL ++ NQ+  LP    
Sbjct: 138 LNQFTALPEEIGKLQNLQEMESSKN--QLTTLPKEIGNLQNLQELYLNENQLTALPIEIG 195

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            L  L+ L +  N L   P   +E+G    +Q +  LV  R+  T
Sbjct: 196 NLQNLQKLVLNRNQLTALP---IEIGN---LQNLQKLVLNRNQLT 234


>gi|124009683|ref|ZP_01694354.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123984287|gb|EAY24631.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 373

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/284 (34%), Positives = 158/284 (55%), Gaps = 5/284 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +E  ++  T DL L    + +   LP  IG+L+ L S+D   N + ++P +IG L  LKK
Sbjct: 58  VEAITRLNTEDLKLPKYQLAH---LPKQIGELAQLQSIDACNNFLTSLPESIGQLKQLKK 114

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++ +LP S   LL L  L+L  N  S LP  +     L EL L  N  + L ++
Sbjct: 115 LYLQDNQLSDLPKSFAQLLQLTLLNLDQNSFSDLPSGIQSFECLLELSLNHNKFTQLAEN 174

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I     L+KL +  N L+ LP  IGQC  L++L + +N+L  LPE++G++  L  L   +
Sbjct: 175 IVQFTQLQKLYINHNQLKTLPKNIGQCGQLQKLYLAHNQLTTLPESIGQLTQLNELKASH 234

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N + +LP ++  ++ L  L + +N+L  +P+S+     L  ++I +N   L  LP SIG+
Sbjct: 235 NRLAELPKSIGQITGLYNLRLEYNQLIQLPKSIGQLNWLYHLHIDHN--QLTELPESIGH 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +  L  L +S+NQ+  LP+S   L++L+VL V  N L   P++I
Sbjct: 293 MNWLYYLHVSHNQLDTLPESIGQLAQLQVLEVSHNRLTTLPKSI 336



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 1/206 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I     L+ L L+ N+   +   I   + L+KL ++ N++  LP +IG    L  L
Sbjct: 148 LPSGIQSFECLLELSLNHNKFTQLAENIVQFTQLQKLYINHNQLKTLPKNIGQCGQLQKL 207

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP ++ +L +L EL    N L+ LP SIG +  L  L +E N L +LP +I
Sbjct: 208 YLAHNQLTTLPESIGQLTQLNELKASHNRLAELPKSIGQITGLYNLRLEYNQLIQLPKSI 267

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ + L  L +D+N+L  LPE++G ++ L  L V +N +  LP ++  L+ L+ L+VS N
Sbjct: 268 GQLNWLYHLHIDHNQLTELPESIGHMNWLYYLHVSHNQLDTLPESIGQLAQLQVLEVSHN 327

Query: 288 ELESVPESLCFATTLVKMNI-GNNFA 312
            L ++P+S+     L  + + GNN A
Sbjct: 328 RLTTLPKSIGRLRQLKSLGLTGNNIA 353


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L V P  + ++
Sbjct: 325 QRLQTLYLGNNQLNVLPNKLEQL 347



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP  IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG   
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 257 NLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L   P  + ++
Sbjct: 325 QRLQTLYLGNNQLNFLPNKVEQL 347



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP  IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 114/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG   
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L  L L  NQ++ LP  + +L  L+ELDL  N L++
Sbjct: 257 NLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 159/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS+N+++A+P  IG L +L+KL L+ N++  +P  IG L +L  L
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQEL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L RL+ L LG N  +S+   IG L +L+ L ++ N L  LP  I
Sbjct: 147 NLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +D+N+L  LP+ +G++  L++L +R N +  LP  +  L +L++L ++ N
Sbjct: 207 GQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+ +  N   L  LP+ IG L+ L+ELD+  NQ+  LP++   L
Sbjct: 267 KLTTLPKEIGQLQNLQKLKLYEN--QLTTLPKEIGQLQNLQELDLDGNQLITLPENIGQL 324

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            RL+ L +  N L V P  + ++
Sbjct: 325 QRLQTLYLGNNQLNVLPNKLEQL 347



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 134/250 (53%), Gaps = 25/250 (10%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG L +L  L LR
Sbjct: 182 EIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLR 241

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++ LP  + +L  L++L L  N L++LP  IG L +L+KL +  N L  LP  IGQ 
Sbjct: 242 NNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQL 301

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L+EL +D N+L  LPE +G++  L+ L +  N +  LP  +  L +L  LD+  N+  
Sbjct: 302 QNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQ-- 359

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                  L ALP+ IG L+ L+ L++  NQ+  LP+  + L  L
Sbjct: 360 -----------------------LNALPKEIGKLQKLQTLNLKYNQLATLPEEIKQLKNL 396

Query: 351 RVLRVQENPL 360
           + L +  NPL
Sbjct: 397 KKLYLHNNPL 406



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 23/212 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           + +  LP  IG+L +L SL L  N++  +P  IG L +L+ L L  N++  LP  IG   
Sbjct: 197 NQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQ 256

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L +L  L L  NQ++ LP  + +L  L+ELDL  N L +
Sbjct: 257 NLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLIT 316

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP++IG L  L+ L +  N L  LP+ + Q  +L  L +++N+L ALP+ +GK+  L+ L
Sbjct: 317 LPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTL 376

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +++YN +  LP  +  L +L++L +  N L S
Sbjct: 377 NLKYNQLATLPEEIKQLKNLKKLYLHNNPLPS 408


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  157 bits (396), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  +D S N+++ +P  IG L  L++L L+ N++  +P  IG+L +L  L
Sbjct: 145 LPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRL 204

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ +P  + +L  L+ L L  N L ++P  IG L +L+ L + +N L  +P  I
Sbjct: 205 DLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEI 264

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+ L +D+N+L  +P+ +G + +L+VL++  N +  LP  +  L +L+ L ++ N
Sbjct: 265 GNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVN 324

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L ++N+ +N   L  LP+ IG L+ L+EL +  NQ++ LP     L
Sbjct: 325 ALTTLPKEIGNLQNLKELNLTSN--RLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKL 382

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L +  NPL   P  I ++
Sbjct: 383 QSLEYLNLNGNPLTSFPEEIGKL 405



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 148/252 (58%), Gaps = 2/252 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L+ N++  VP  IG L +L++LDL  N++  +P  IG L SL  L
Sbjct: 168 LPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGL 227

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  +P  + +L  L+ L L SN L+++P  IG+L +LK L ++ N L  +P  I
Sbjct: 228 TLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEI 287

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   SL+ L +D N L  LP+ +GK+  L+ L++  N +  LP  + +L +L+EL+++ N
Sbjct: 288 GNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSN 347

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+ +     L ++++  ++  L+ LP+ IG L+ LE L+++ N +   P+    L
Sbjct: 348 RLTTLPKEIGKLQNLQELHL--DYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKL 405

Query: 348 SRLRVLRVQENP 359
             L+VL +  NP
Sbjct: 406 QNLKVLSLVGNP 417



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 156/274 (56%), Gaps = 6/274 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L +N++  +P  IG L  L+KLDL  N+I  LP+ IG L SL+ L
Sbjct: 52  LPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           +L  NQ++ +P  +  L  L+ L LG N+ L +LP  IG L +L+++    N L  LP  
Sbjct: 112 NLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPKE 171

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IG+   L+ L +++N+L  +P+ +G +  L+ L +  N +  +P  +  L SL+ L +SF
Sbjct: 172 IGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSF 231

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L ++P+ +     L  + + +N   L  +P+ IGNL+ L+ L + +N++  +P     
Sbjct: 232 NQLRTIPKEIGKLQNLQGLTLTSN--GLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGN 289

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           L  L+VL +  N L   P+   E+G    +Q +A
Sbjct: 290 LQSLQVLTLDRNLLAPLPK---EIGKLQNLQRLA 320



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 162/296 (54%), Gaps = 9/296 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN-RIVAVPATIGGLSSLKK 143
           E+   +   DLNL     + +  +P  IG+L  L  L L  N +++A+P  IG L +L++
Sbjct: 101 EIGQLQSLLDLNLS---FNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQE 157

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           +D   N++I LP  IG+L  L  L L  NQ++ +P  +  L  L+ LDL  N L+++P  
Sbjct: 158 MDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKE 217

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L SL+ L +  N L  +P  IG+  +L+ L +  N L  +P+ +G +  L+VL + +
Sbjct: 218 IGQLQSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDH 277

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  +P  + +L SL+ L +  N L  +P+ +     L ++ +  N   L  LP+ IGN
Sbjct: 278 NKLATIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVN--ALTTLPKEIGN 335

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           L+ L+EL++++N++  LP     L  L+ L +  N L+  P+   E+G    ++Y+
Sbjct: 336 LQNLKELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPK---EIGKLQSLEYL 388



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 154/275 (56%), Gaps = 3/275 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  L +++   + +  L L+  ++ A+P  IG L +L+ L+L  N++  +P  IG+L 
Sbjct: 24  EDVHTLNEALQNPTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQ 83

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN-DLE 221
            L  LDL  N+I+ LP  + +L  L +L+L  N L+++P  IG L  L++L +  N  L 
Sbjct: 84  HLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLI 143

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L+E+    N+L  LP+ +G++  L+ L + +N +  +P  + +L +L+ 
Sbjct: 144 ALPKEIGKLQNLQEMDSSRNQLITLPKEIGELQHLQRLFLNFNQLTTVPQEIGNLQNLQR 203

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+  N+L ++P+ +    +L  + +   F  LR +P+ IG L+ L+ L +++N +  +P
Sbjct: 204 LDLDKNQLTTIPKEIGQLQSLQGLTLS--FNQLRTIPKEIGKLQNLQGLTLTSNGLATIP 261

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
                L  L+VL +  N L   P+ I  + +  V+
Sbjct: 262 KEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVL 296



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 110/186 (59%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + +  +P  IGKL +L  L L+ N +  +P  IG L +LK L L  N++  +P  IG+L
Sbjct: 231 FNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNL 290

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L L  N ++ LP  + +L  L+ L L  N L++LP  IG+L +LK+L + +N L 
Sbjct: 291 QSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLT 350

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+  +L+EL +DYN+LK LP+ +GK+ +LE L++  N +   P  +  L +L+ 
Sbjct: 351 TLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKV 410

Query: 282 LDVSFN 287
           L +  N
Sbjct: 411 LSLVGN 416


>gi|255079004|ref|XP_002503082.1| predicted protein [Micromonas sp. RCC299]
 gi|226518348|gb|ACO64340.1| predicted protein [Micromonas sp. RCC299]
          Length = 333

 Score =  156 bits (395), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/268 (38%), Positives = 153/268 (57%), Gaps = 5/268 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+LS L +L L+ N +  +P+ IG L+SLK L L+ NR+  LP+ +G L SL+ L
Sbjct: 11  LPAEIGQLSDLSTLRLTGNMLFTLPSEIGFLTSLKILKLNDNRLRSLPEEVGFLASLILL 70

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLS---SLPDSIGSLISLKKLIVETNDLEELP 224
           DL GNQ+++L   L+RL  L  L +G+N LS   SLP  IG L SL +L ++ N L +LP
Sbjct: 71  DLSGNQLTSLNAELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLP 130

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q   L  L +D N+L  LP  +G+   L  L++ +N +  LP  +  + +L  L++
Sbjct: 131 AEIVQLERLNRLNLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNL 190

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P     AT L K+++  N   L  LP  IG  + L  LD+S NQ+  LP   
Sbjct: 191 DNNQLTSLPLENWPATYLEKLHLSGN--KLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEI 248

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L+ L+VLR+  N L   P  I ++ +
Sbjct: 249 GQLTSLQVLRLLVNKLTSLPAEIGQLAS 276



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 139/276 (50%), Gaps = 25/276 (9%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E++  K    L++ N  + ++  LP  IG+L+SL  L L  N++  +PA I  L  L +L
Sbjct: 83  ELARLKSLGYLHVGNNQLSSLTSLPAEIGQLTSLTELYLDNNKLTDLPAEIVQLERLNRL 142

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG    L  L L  NQ++ LP  + ++  L  L+L +N L+SLP   
Sbjct: 143 NLDNNKLTTLPPEIGQFRDLGELTLSHNQLTTLPAEIGQIYTLGLLNLDNNQLTSLPLEN 202

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                L+KL +  N L  LP  IGQ   L  L +  N+L  LP  +G++ +L+VL +  N
Sbjct: 203 WPATYLEKLHLSGNKLTTLPAKIGQFKDLWLLDLSRNQLTTLPAEIGQLTSLQVLRLLVN 262

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L+SLR+L +S+NEL S                         LP  IG L
Sbjct: 263 KLTSLPAEIGQLASLRKLYLSWNELTS-------------------------LPAEIGQL 297

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
             LE LD+  NQ+  +PD    L+ L +L + EN L
Sbjct: 298 TSLEMLDLQYNQLTSVPDEIGQLTSLELLGLGENQL 333


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/309 (32%), Positives = 159/309 (51%), Gaps = 7/309 (2%)

Query: 61  MIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQ--NKLMDNIEWLPDSIGKLSSL 118
           +++C CC  +  EK     L   ++  +   T DL  Q  N  + N   LP  IG L +L
Sbjct: 22  ILLCFCCTIEAKEKGVYYNLTEALQHPTDVRTLDLQAQDSNHKLTN---LPKEIGNLQNL 78

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             L L   ++  +P  IG L  L+ LDL+ N +  LP  IG L  L  L L  NQ++  P
Sbjct: 79  QKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFP 138

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +L++L L  N L++LP+ IG L  LK+L ++ N    LP  I +   L+EL +
Sbjct: 139 KEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKELHL 198

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             NR   LP+ + K+  L+ L++  N    LP  +  L +L+ L++  N   ++P+ +  
Sbjct: 199 GSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKK 258

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +N+ +N      LP+ IGNL+ L++L +++NQ+  LP     L  L+ L + EN
Sbjct: 259 LQNLQWLNLDSN--RFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWEN 316

Query: 359 PLEVPPRNI 367
            L   P+ I
Sbjct: 317 QLTTLPKEI 325



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/293 (30%), Positives = 144/293 (49%), Gaps = 35/293 (11%)

Query: 100 KLMDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K + N++WL          P  I KL +L  L+L  NR   +P  I  L +L+ L+L +N
Sbjct: 211 KKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSN 270

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG---- 205
           R   LP  IG+L  L  L L  NQ++ LP  + +L  L+ L L  N L++LP  IG    
Sbjct: 271 RFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQN 330

Query: 206 -------------------SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
                               L +L++L +  N    LP  IG   +L++L + YN+L  L
Sbjct: 331 LQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLTTL 390

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P+ +G +  L+ L +  N +  LP  + +L SL  LD+S+N+L ++P+ +          
Sbjct: 391 PKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYNDLTTLPKEI--GKLQKLKK 448

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           +   +  L+ LP+ I  L+ LE L +  NQ+  LP+    L +L+ L + +NP
Sbjct: 449 LELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQKLQELDLGDNP 501



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I KL +L  L+L  NR   +P  I  L +L+ L+L +NR   LP  I  L +L +L
Sbjct: 206 LPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWL 265

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+ + LP  +  L +L++L L  N L++LP  IG L SL++L +  N L  LP  I
Sbjct: 266 NLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEI 325

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L++L ++ N L  LP+ +GK+  L+ L +  N    LP  + +L +L++LD+ +N
Sbjct: 326 GNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYN 385

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+++ NN   L  LP+ IGNL+ LE LD+S N +  LP     L
Sbjct: 386 KLTTLPKEIGNLQNLQKLDLYNN--QLTTLPKEIGNLQSLESLDLSYNDLTTLPKEIGKL 443

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L+  P+ I ++
Sbjct: 444 QKLKKLELYYNQLKTLPKEIEKL 466



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 47/153 (30%), Positives = 79/153 (51%), Gaps = 2/153 (1%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           + L  LP  IG   +L++L +   +L  LP+ +GK+  LE L + YN++  LP  +  L 
Sbjct: 63  HKLTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQ 122

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L +L +  N+L + P+ +     L K+++ +N   L  LP  IG L+ L+EL +  NQ 
Sbjct: 123 KLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHN--QLTTLPEEIGKLQKLKELHLDGNQF 180

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP     L +L+ L +  N     P+ I ++
Sbjct: 181 TTLPKEIEKLQKLKELHLGSNRFTTLPKEIKKL 213



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 10/115 (8%)

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDV----SFNELESVPESLCFATTLVKMNIGNNFADLR 315
            V YN    L   +   + +R LD+    S ++L ++P+ +     L K+++      L 
Sbjct: 36  GVYYN----LTEALQHPTDVRTLDLQAQDSNHKLTNLPKEIGNLQNLQKLSLYG--KQLT 89

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP+ IG L+ LE LD++ N +  LP     L +L  LR+  N L   P+ I ++
Sbjct: 90  TLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKL 144


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 161/263 (61%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L++N++ +VPA IG L+SL +L L  N++  LP  IG L SL +L
Sbjct: 13  VPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAEIGQLASLEWL 72

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++++P  + +L  L+ L LG N L+S+P  IG L SL  L ++ N L  +P  I
Sbjct: 73  CLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEI 132

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ ++L+ L +  N+L ++P  VG++ +LE L +++N +  +P  +  L+SL +L V+ N
Sbjct: 133 GRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADN 192

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T+L ++ + +N   L +LP  IG L +L+EL +++N++  LP     L
Sbjct: 193 QLTSMPAEIWRLTSLRELYLEDN--RLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQL 250

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + LR L +  N L   P  I ++
Sbjct: 251 TSLRGLYLYGNQLTSVPAEIGQL 273



 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L  N++ +VPA IG L++LK LDL  N++  +P  +G L SL  L
Sbjct: 105 VPAEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEAL 164

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+++++P  + +L  LE+L +  N L+S+P  I  L SL++L +E N L  LP  I
Sbjct: 165 RLQHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEI 224

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ + L+EL ++ N L  LP  +G++ +L  L +  N +  +P  +  L SLREL +  N
Sbjct: 225 GQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGN 284

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L  +N+  N   L ++P  IG L  L  LD+S N +  LP     L
Sbjct: 285 QLTSVPAEIGQLTSLDVLNLSGN--QLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQL 342

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             LR+L + +N L   P  I ++
Sbjct: 343 MSLRLLDLDDNRLASVPAEIGQL 365



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L++L  LDL +N++ +VPA +G L+SL+ L L  NR+  +P  IG L SL  L
Sbjct: 128 VPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKL 187

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ++++P  + RL  L EL L  N L+SLP  IG L  LK+L +  N+L  LP  I
Sbjct: 188 YVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEI 247

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SLR L +  N+L ++P  +G++ +L  L ++ N +  +P  +  L+SL  L++S N
Sbjct: 248 GQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGN 307

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T L  +++  N+  L +LP  IG L  L  LD+ +N++  +P     L
Sbjct: 308 QLTSVPAEIGQLTFLGCLDLSYNY--LTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQL 365

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             LR L +  N L   P  I ++
Sbjct: 366 RSLRELFLNGNLLTSVPAEIGQL 388



 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 101/271 (37%), Positives = 157/271 (57%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L+DN +  +P  IG+L+SL  L L +N++ +VPA IG L+SL  L L  N++  +P  IG
Sbjct: 74  LIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDNNQLSSVPAEIG 133

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  LDL+ NQ++++P  + +L  LE L L  N L+S+P  IG L SL+KL V  N 
Sbjct: 134 RLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQLASLEKLYVADNQ 193

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  +P  I + +SLREL ++ NRL +LP  +G++  L+ L +  N +  LP  +  L+SL
Sbjct: 194 LTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSL 253

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R L +  N+L SVP  +    +L ++ +  N   L ++P  IG L  L+ L++S NQ+  
Sbjct: 254 RGLYLYGNQLTSVPAEIGQLMSLRELYLQGN--QLTSVPAEIGQLTSLDVLNLSGNQLTS 311

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +P     L+ L  L +  N L   P  I ++
Sbjct: 312 VPAEIGQLTFLGCLDLSYNYLTSLPAEIGQL 342



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 153/283 (54%), Gaps = 6/283 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV        L LQ+  + ++   P  IG+L+SL  L +++N++ ++PA I  L+SL++L
Sbjct: 154 EVGQLTSLEALRLQHNRLTSV---PAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLREL 210

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  LP  IG L  L  L L  N+++ LP  + +L  L  L L  N L+S+P  I
Sbjct: 211 YLEDNRLTSLPAEIGQLALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEI 270

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L+SL++L ++ N L  +P  IGQ +SL  L +  N+L ++P  +G++  L  L + YN
Sbjct: 271 GQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYN 330

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L SLR LD+  N L SVP  +    +L ++ +  N   L ++P  IG L
Sbjct: 331 YLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNL--LTSVPAEIGQL 388

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             + EL + NNQ+  +P     L+ L  L +  N L   P  I
Sbjct: 389 -TVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEI 430



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 146/248 (58%), Gaps = 8/248 (3%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IG+L+SL  L L  N++ +VPA IG L SL++L L  N++  +P  IG
Sbjct: 235 LNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIG 294

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L SL  L+L GNQ++++P  + +L  L  LDL  N L+SLP  IG L+SL+ L ++ N 
Sbjct: 295 QLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNR 354

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  +P  IGQ  SLREL ++ N L ++P  +G++ T+  L +  N +  +P  +  L++L
Sbjct: 355 LASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL-TVRELYLENNQLTSVPAEVGQLAAL 413

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L++S N+L SVP  +   T+L  + +  N   L ++P  IG L  L  L +S+ +   
Sbjct: 414 EQLNLSRNKLTSVPAEIGLLTSLRWLLLNGN--QLTSVPGEIGQLTSLRLLFLSSGE--- 468

Query: 340 LPDSFRML 347
            P + R L
Sbjct: 469 -PAAIRKL 475



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/204 (36%), Positives = 120/204 (58%), Gaps = 4/204 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      R+L LQ   + ++   P  IG+L+SL  L+LS N++ +VPA IG L+ L  L
Sbjct: 269 EIGQLMSLRELYLQGNQLTSV---PAEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCL 325

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N +  LP  IG L+SL  LDL  N+++++P  + +L  L EL L  N L+S+P  I
Sbjct: 326 DLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEI 385

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L ++++L +E N L  +P  +GQ ++L +L +  N+L ++P  +G + +L  L +  N
Sbjct: 386 GQL-TVRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGN 444

Query: 265 NIKQLPTTMSSLSSLRELDVSFNE 288
            +  +P  +  L+SLR L +S  E
Sbjct: 445 QLTSVPGEIGQLTSLRLLFLSSGE 468



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 108/192 (56%), Gaps = 3/192 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L+L  N L+S+P  IG L SL++L +  N L  +P  IG+ +SL EL ++ N+L +LP  
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPAE 62

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++ +LE L +  N +  +P  +  L+SL  L +  N+L SVP  +   T+L  + + N
Sbjct: 63  IGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGLDN 122

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L ++P  IG L  L+ LD+  NQ+  +P     L+ L  LR+Q N L   P  I +
Sbjct: 123 N--QLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLTSVPAEIGQ 180

Query: 370 MGAQAVVQYMAD 381
           + +   + Y+AD
Sbjct: 181 LASLEKL-YVAD 191



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%), Gaps = 2/113 (1%)

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL++  N +  +P  +  L+SL  L ++ N+L SVP  +    +L ++ + +N   L +L
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDN--QLTSL 59

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P  IG L  LE L + +NQ+  +P     L+ L  L + +N L   P  I ++
Sbjct: 60  PAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQL 112



 Score = 45.8 bits (107), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 3/85 (3%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R+L L+N  + ++   P  +G+L++L  L+LS N++ +VPA IG L+SL+ L L+ N++ 
Sbjct: 391 RELYLENNQLTSV---PAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLT 447

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL 177
            +P  IG L SL  L L   + +A+
Sbjct: 448 SVPGEIGQLTSLRLLFLSSGEPAAI 472


>gi|410956147|ref|XP_003984706.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Felis catus]
          Length = 1222

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 162/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA  G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 311 VSALRELRKLNLSHNQLPALPAQXGALAHLEELDVSFNRLAHLPDSLSCLFRLRTLDVDH 370

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 371 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 430

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 431 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 490

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 491 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 548

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 549 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 589



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 245 IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 304

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP    +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 305 ALGAEVVSALRELRKLNLSHNQLPALPAQXGALAHLEELDVSFNRLAHLPDSLSCLFRLR 364

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 365 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 422

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 423 PSGFCELAS 431


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 152/251 (60%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD I KL ++  L+LS N+I  +P ++  L  L +L +  N +  +PD IG L SL  L
Sbjct: 52  IPDEISKLKNMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNIL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+I+ +P +L  L +L EL +GS+ L+++PD+IG L S+K L ++ N++E++P ++
Sbjct: 112 KLNNNKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSL 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L EL + YN L A+P+ +GK+ ++++L++R N   ++P ++ +L  L EL++  N
Sbjct: 172 CALEQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P+ +    ++  +N+  N   +  +P S+  LE L EL++  N +  +PD    L
Sbjct: 232 ALTSIPDEISKLKSMKTLNLSANT--IEKIPDSLCALEQLTELNMKYNALTAIPDEIGKL 289

Query: 348 SRLRVLRVQEN 358
             +++L ++ N
Sbjct: 290 KSMKILNLKSN 300



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 148/258 (57%), Gaps = 4/258 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+   L  L+LS N+I  +P ++  L  L +L++  N +  +PD I  L ++  L
Sbjct: 6   VPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLKNMKIL 65

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+I+ +P +L  L +L EL +  N L+++PD IG L SL  L +  N + ++P ++
Sbjct: 66  NLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSL 125

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L EL +  + L A+P+A+GK+ ++++L +  N I+++P ++ +L  L EL++ +N
Sbjct: 126 CALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYN 185

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            L ++P+ +    ++  +N+  N FA    +P S+  LE L EL++ +N +  +PD    
Sbjct: 186 ALTAIPDEIGKLKSMKILNLRSNKFA---KIPDSLCALEQLTELNMKSNALTSIPDEISK 242

Query: 347 LSRLRVLRVQENPLEVPP 364
           L  ++ L +  N +E  P
Sbjct: 243 LKSMKTLNLSANTIEKIP 260



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 150/260 (57%), Gaps = 2/260 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N +  VP  IG    L+KL+L +N+I ++P+S+  L  L  L++R N ++A+P  +S+L 
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTAIPDEISKLK 60

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            ++ L+L SN ++ +PDS+ +L  L +L +E N L  +P  IG+  SL  L+++ N++  
Sbjct: 61  NMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAK 120

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +P+++  +  L  L +  + +  +P  +  L S++ L +  NE+E +P+SLC    L ++
Sbjct: 121 IPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTEL 180

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+  N   L A+P  IG L+ ++ L++ +N+   +PDS   L +L  L ++ N L   P 
Sbjct: 181 NMKYNA--LTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPD 238

Query: 366 NIVEMGAQAVVQYMADLVEK 385
            I ++ +   +   A+ +EK
Sbjct: 239 EISKLKSMKTLNLSANTIEK 258



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 61/170 (35%), Positives = 106/170 (62%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  +PD+IGKL S+  L L EN I  +P ++  L  L +L++  N +  +PD IG L 
Sbjct: 139 DALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLK 198

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           S+  L+LR N+ + +P +L  L +L EL++ SN L+S+PD I  L S+K L +  N +E+
Sbjct: 199 SMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANTIEK 258

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           +P ++     L EL + YN L A+P+ +GK+ ++++L+++ N   ++P +
Sbjct: 259 IPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIPDS 308



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 112/193 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +PDS+  L  L  L +  + + A+P  IG L S+K L L  N I ++PDS+  L 
Sbjct: 116 NKIAKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALE 175

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+++ N ++A+P  + +L  ++ L+L SN  + +PDS+ +L  L +L +++N L  
Sbjct: 176 QLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTS 235

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I +  S++ L +  N ++ +P+++  +  L  L+++YN +  +P  +  L S++ L
Sbjct: 236 IPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKIL 295

Query: 283 DVSFNELESVPES 295
           ++  N+   +P+S
Sbjct: 296 NLKSNKFAKIPDS 308


>gi|296221908|ref|XP_002756980.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Callithrix jacchus]
          Length = 1072

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/269 (34%), Positives = 158/269 (58%), Gaps = 2/269 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  IG+L +L  LDLS N +  +P  +G L +L++L+L++ ++  LP  IG L
Sbjct: 80  FNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQL 139

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  NQ++ALP  + +L  L+ L L +N L++LP  I  L +L+ L +  N L 
Sbjct: 140 KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 199

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+EL + YN+L  LP+ +G++  L+ L++    +  LP  +  L +L+ 
Sbjct: 200 ILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQW 259

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+SFN L ++P+ +     L ++++  N   L  LP  IG L+ L+ELD+++N++  LP
Sbjct: 260 LDLSFNSLTTLPKEVGQLENLQRLDLHQN--RLATLPMEIGQLKNLQELDLNSNKLTTLP 317

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              R L  L+ L +  N L   P+ I ++
Sbjct: 318 KEIRQLRNLQELDLHRNQLTTLPKEIGQL 346



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 151/269 (56%), Gaps = 2/269 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  LP  +G+L +L  L+L+  ++  +P  IG L +L+ L L+ N++  LP  IG L
Sbjct: 103 FNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLKNLQLLILYYNQLTALPKEIGQL 162

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  NQ++ LP  + +L  L+ LDLG+N L+ LP  IG L +L++L +  N L 
Sbjct: 163 KNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLT 222

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ  +L+ L ++  +L  LP+ +G++  L+ L + +N++  LP  +  L +L+ 
Sbjct: 223 ILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQR 282

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+  N L ++P  +     L ++++ +N   L  LP+ I  L  L+ELD+  NQ+  LP
Sbjct: 283 LDLHQNRLATLPMEIGQLKNLQELDLNSN--KLTTLPKEIRQLRNLQELDLHRNQLTTLP 340

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L  L+ L +    L   P+ I E+
Sbjct: 341 KEIGQLQNLKTLNLIVTQLTTLPKEIGEL 369



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS N +  +P  +G L +L++LDLH NR+  LP  IG L +L  L
Sbjct: 247 LPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQEL 306

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ELDL  N L++LP  IG L +LK L +    L  LP  I
Sbjct: 307 DLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEI 366

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +   +L  LP+ +G++  L+ L++    +  LP  +  L +L+ L++  N
Sbjct: 367 GELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 426

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + +  N   + ALP+ IG L+ L+ L +  NQ+  LP     L
Sbjct: 427 QLTTLPKEIGELQNLEILVLREN--RITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQL 484

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 485 QNLQRLDLHQNQLTTLPKEIGQL 507



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 154/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL   ++  +  LP  IG+L +L +L+L   ++  +P  IG L +LK L
Sbjct: 365 EIGELQNLKTLNL---IVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTL 421

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG+L +L  L LR N+I+ALP  + +L  L+ L L  N L++LP  I
Sbjct: 422 NLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEI 481

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+EL +D N+L  LP+ + ++  L VL +  N
Sbjct: 482 GQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNN 541

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L SL+ L +  N L ++P+ +     L  + + +N   L  LP+ IG L
Sbjct: 542 QLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISN--QLMTLPKEIGQL 599

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+EL +  NQ+   P   R L  L+ L +  NPL
Sbjct: 600 QNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPL 635



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 166/296 (56%), Gaps = 8/296 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L N   + +  LP  IG+L +L  L LS N++  +P  IG L +L++L
Sbjct: 181 EIRQLKNLQMLDLGN---NQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L++ ++  LP  IG L +L +LDL  N ++ LP  + +L  L+ LDL  N L++LP  I
Sbjct: 238 NLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L + +N L  LP  I Q  +L+EL +  N+L  LP+ +G++  L+ L++   
Sbjct: 298 GQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVT 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L++   +L ++P+ +     L  +N+      L  LP+ IG L
Sbjct: 358 QLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLI--VTQLTTLPKEIGEL 415

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           + L+ L++ +NQ+  LP     L  L +L ++EN +   P+   E+G    +Q++ 
Sbjct: 416 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPK---EIGQLQNLQWLG 468



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/306 (32%), Positives = 165/306 (53%), Gaps = 6/306 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL   ++  +  LP  IG+L +L +L+L   ++  +P  IG L +LK L
Sbjct: 342 EIGQLQNLKTLNL---IVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTL 398

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L   ++  LP  IG+L +L  L+L  NQ++ LP  +  L  LE L L  N +++LP  I
Sbjct: 399 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 458

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L+ L +  N
Sbjct: 459 GQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN 518

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +LR LD+  N+L ++P+ +    +L  + +G+N   L  LP+ IG L
Sbjct: 519 QLTTLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSN--RLSTLPKEIGQL 576

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAVVQYMADLV 383
           + L+ L + +NQ+  LP     L  L+ L + EN L   P+ I ++   Q +  Y+  L 
Sbjct: 577 QNLQVLGLISNQLMTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLS 636

Query: 384 EKRDAK 389
            K   +
Sbjct: 637 SKEKKR 642



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+  ++  +P  IG L +L+ LDL  N +  LP  +G L +L  L
Sbjct: 224 LPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRL 283

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP+ + +L  L+ELDL SN L++LP  I  L +L++L +  N L  LP  I
Sbjct: 284 DLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEI 343

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +   +L  LP+ +G++  L+ L++    +  LP  +  L +L+ L++   
Sbjct: 344 GQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVT 403

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +N+ +N   L  LP+ IG L+ LE L +  N+I  LP     L
Sbjct: 404 QLTTLPKEIGELQNLKTLNLLDN--QLTTLPKEIGELQNLEILVLRENRITALPKEIGQL 461

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 462 QNLQWLGLHQNQLTTLPKEIGQL 484



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 173/327 (52%), Gaps = 9/327 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   K  ++L+L +   + +  LP  I +L +L  LDL  N++  +P  IG 
Sbjct: 289 RLATLPMEIGQLKNLQELDLNS---NKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQ 345

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +LK L+L   ++  LP  IG+L +L  L+L   Q++ LP  +  L  L+ L+L    L
Sbjct: 346 LQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQL 405

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  IG L +LK L +  N L  LP  IG+  +L  L +  NR+ ALP+ +G++  L+
Sbjct: 406 TTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQ 465

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L +L+ LD+  N+L ++P+ +     L ++ +  N   L  L
Sbjct: 466 WLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDEN--QLTTL 523

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+ I  L+ L  LD+ NNQ+  LP     L  L+VL +  N L   P+   E+G    +Q
Sbjct: 524 PKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPK---EIGQLQNLQ 580

Query: 378 YMADLVEKRDAKTQPVKQKKSWVEMCF 404
            +  +  +     + + Q ++  E+C 
Sbjct: 581 VLGLISNQLMTLPKEIGQLQNLQELCL 607



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 148/268 (55%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  I +L +L  LDL  N++  +P  IG L +L++L L  N++  LP  IG L 
Sbjct: 173 NQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLE 232

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L   +++ LP  + +L  L+ LDL  N+L++LP  +G L +L++L +  N L  
Sbjct: 233 NLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLAT 292

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+EL ++ N+L  LP+ + ++  L+ L +  N +  LP  +  L +L+ L
Sbjct: 293 LPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 352

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++   +L ++P+ +     L  +N+      L  LP+ IG L+ L+ L++   Q+  LP 
Sbjct: 353 NLIVTQLTTLPKEIGELQNLKTLNLI--VTQLTTLPKEIGELQNLKTLNLIVTQLTTLPK 410

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L + +N L   P+ I E+
Sbjct: 411 EIGELQNLKTLNLLDNQLTTLPKEIGEL 438



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 170/318 (53%), Gaps = 14/318 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L +L+L   ++  +P  IG L +LK L+L   ++  LP  IG+L 
Sbjct: 334 NQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQ 393

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L   Q++ LP  +  L  L+ L+L  N L++LP  IG L +L+ L++  N +  
Sbjct: 394 NLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITA 453

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  +  L +L+EL
Sbjct: 454 LPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQEL 513

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P+ +     L  +++ NN   L  LP+ +  L+ L+ L + +N++  LP 
Sbjct: 514 CLDENQLTTLPKEIEQLQNLRVLDLDNN--QLTTLPKEVLRLQSLQVLALGSNRLSTLPK 571

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSWV 400
               L  L+VL +  N L   P+   E+G    +Q +   +++    T P  ++Q K+  
Sbjct: 572 EIGQLQNLQVLGLISNQLMTLPK---EIGQLQNLQELC--LDENQLTTFPKEIRQLKNLQ 626

Query: 401 EMCFF-----SRSNKRKR 413
           E+  +     S+  KR R
Sbjct: 627 ELHLYLNPLSSKEKKRIR 644


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 152/278 (54%), Gaps = 3/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +P  +G+L SL  L L+ N++  VPA +G L SL++L L  N++  +P  +G L 
Sbjct: 64  NQLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLR 123

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L GNQ+  +P  L +L  L  LDL  N L  +P  +G L  L  L +  N L E
Sbjct: 124 GLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLRE 183

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +GQ S L +L +  N+L+ +P  +G++  L+ L +  N ++++PT +  L  L+EL
Sbjct: 184 VPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQEL 243

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N+L  +P  L     L  + +  N   LR +P  +G L  L  LD+S NQ+R +P 
Sbjct: 244 DLSGNQLTGIPTELGQLCGLQDLYLAGN--QLREVPAELGQLRDLHMLDLSGNQLREVPA 301

Query: 343 SFRMLSRLRVLRVQEN-PLEVPPRNIVEMGAQAVVQYM 379
               LSRL    +++N  L  PP  IV  G  A++ ++
Sbjct: 302 ELGQLSRLHAFCIEDNDQLLTPPSEIVSQGTIAILTFL 339



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 142/250 (56%), Gaps = 3/250 (1%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L +L++LD+S+  +  VPA +G L SL++L L  N++ E+P  +G L SL  L L GNQ+
Sbjct: 30  LGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQL 89

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
             +P  L +L  L+EL L  N L+ +P  +G L  L++L +  N L E+P  +GQ   L 
Sbjct: 90  REVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLH 149

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +  N+L+ +P  +G++  L +L +  N ++++P  +  LS L +L ++ N+L  VP 
Sbjct: 150 MLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPA 209

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            L     L ++ +  N   LR +P  +G L  L+ELD+S NQ+  +P     L  L+ L 
Sbjct: 210 ELGQLRGLQELYLSGN--QLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLY 267

Query: 355 VQENPL-EVP 363
           +  N L EVP
Sbjct: 268 LAGNQLREVP 277



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/255 (31%), Positives = 134/255 (52%), Gaps = 2/255 (0%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
            ++V L +S  +++        L +L  LD+    + ++P  +G L SL  L L GNQ+ 
Sbjct: 8   QAIVELLISIYKVIPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLR 67

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            +P  L +L  L+EL L  N L  +P  +G L SL++L +  N L  +P  +GQ   L+E
Sbjct: 68  EVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQE 127

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L+ +P  +G++  L +L +  N ++++P  +  L  L  LD+S N+L  VP  
Sbjct: 128 LYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAE 187

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L   + L K+ +  N   LR +P  +G L  L+EL +S NQ+R +P     L  L+ L +
Sbjct: 188 LGQLSRLEKLYLAGN--QLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDL 245

Query: 356 QENPLEVPPRNIVEM 370
             N L   P  + ++
Sbjct: 246 SGNQLTGIPTELGQL 260



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 104/185 (56%), Gaps = 1/185 (0%)

Query: 82  SLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
            L EV ++ G  RDL++ +   + +  +P  +G+L  L  LDLS N++  VPA +G LS 
Sbjct: 134 QLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSR 193

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L+KL L  N++ E+P  +G L  L  L L GNQ+  +P  L +L  L+ELDL  N L+ +
Sbjct: 194 LEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGI 253

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  +G L  L+ L +  N L E+P  +GQ   L  L +  N+L+ +P  +G++  L    
Sbjct: 254 PTELGQLCGLQDLYLAGNQLREVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLHAFC 313

Query: 261 VRYNN 265
           +  N+
Sbjct: 314 IEDND 318


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 162/288 (56%), Gaps = 11/288 (3%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LP  I +L +   L +S N++ ++P  I  L +LK+LD+  N++  LP  I  L +
Sbjct: 27  NLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKN 86

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L++R NQ+++LP  +S+L  L++LD+  N L+SLP  I  L  L +L +  N L  L
Sbjct: 87  LTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSL 146

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  I +  +L++L +  N+L +LP  + ++ +L  +++  N +  LP  +S L SL +L 
Sbjct: 147 PPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHEISELKSLTQLS 206

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +S N+L S+P  +    +L +++I  N   L +LP  I  L+ L +LDIS+N++  LP  
Sbjct: 207 ISGNQLTSLPSEIANLESLTQLDISRN--QLTSLPLEITELKNLTQLDISSNKLTSLPPE 264

Query: 344 FRML---------SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
              L         S  + + ++ NPLE PP  IV+ G +AV+ Y   L
Sbjct: 265 ILKLGIDIEWGNNSAEKGIFLEGNPLEKPPIEIVKQGREAVINYFKSL 312


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 155/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ IG+L+SL  L L  N++ ++PA IG L++L +L+L  N++  +P  IG L SLV L
Sbjct: 112 VPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEIGQLTSLVKL 171

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ +P    RL  L EL L  N L+S+P  IG L SL  L +  N L  +P  I
Sbjct: 172 NLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEI 231

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  LR+  N+L ++P  + ++ +LE L +  N +  +P  +  L+++ EL +S+N
Sbjct: 232 GQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYN 291

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   T+L K+ +G+N   L ++P  IG L  L  L +++NQ+  +P     L
Sbjct: 292 QLTSLPAEIGQLTSLEKLYLGDN--RLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQL 349

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L + +++ N L   P  + ++
Sbjct: 350 TSLEIFQLERNQLTSLPTEVGQL 372



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 158/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      R+L L    + ++   P  IG+L+SL  L L  NR+ +VPA IG  ++L +L
Sbjct: 46  EIGQLTSLRELCLTGNQLTSV---PADIGQLTSLERLWLHGNRLTSVPAEIGQFAALIEL 102

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  +P+ IG L SL YL L  NQ+++LP  + +L  L EL+L  N L+++P  I
Sbjct: 103 WLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLTNVPAEI 162

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL KL +  N L  +P    + +SL EL +D NRL ++P  +G++ +L  L +  N
Sbjct: 163 GQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGN 222

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L+SL  L +S N+L SVP  +    +L ++++  N   L ++P  IG L
Sbjct: 223 QLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGN--QLTSVPLEIGQL 280

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             + EL +S NQ+  LP     L+ L  L + +N L   P  I ++
Sbjct: 281 TAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQL 326



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 149/260 (57%), Gaps = 5/260 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+       +LNL    + N+   P  IG+L+SLV L+L++N++  VPA    L+SL +L
Sbjct: 138 EIGQLTALTELNLTENQLTNV---PAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGEL 194

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  +P  IG L SL +L L GNQ++++P  + +L  LE L L SN L+S+P  I
Sbjct: 195 YLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEI 254

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L SL++L +  N L  +P  IGQ +++ EL + YN+L +LP  +G++ +LE L +  N
Sbjct: 255 RQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLEKLYLGDN 314

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L+SL  L ++ N+L SVP  +   T+L    +  N   L +LP  +G L
Sbjct: 315 RLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERN--QLTSLPTEVGQL 372

Query: 325 EMLEELDISNNQIRVLPDSF 344
             L E  + +NQ+  +P + 
Sbjct: 373 TSLVEFRLRSNQLTSVPAAI 392



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 149/265 (56%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+L++L  L+++ N +  +PA IG L+SL++L L  N++  +P  IG L SL  L
Sbjct: 20  VPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERL 79

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN+++++P  + +   L EL L  N L+S+P+ IG L SL  L + +N L  LP  I
Sbjct: 80  WLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEI 139

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L EL +  N+L  +P  +G++ +L  L++  N +  +P     L+SL EL +  N
Sbjct: 140 GQLTALTELNLTENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDN 199

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L SVP  +   T+L  + +  N   L ++P  IG L  LE L +S+NQ+  +P   R L
Sbjct: 200 RLTSVPADIGQLTSLTWLGLYGN--QLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQL 257

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
             L  L +  N L   P  I ++ A
Sbjct: 258 RSLERLDLSGNQLTSVPLEIGQLTA 282



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 136/241 (56%), Gaps = 2/241 (0%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA +G L++L++L++  N +  LP  IG L SL  L L GNQ++++P  + +L  LE 
Sbjct: 19  AVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLER 78

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L L  N L+S+P  IG   +L +L +  N L  +P  IGQ +SL  L +  N+L +LP  
Sbjct: 79  LWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAE 138

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++  L  L++  N +  +P  +  L+SL +L+++ N+L +VP      T+L ++ + +
Sbjct: 139 IGQLTALTELNLTENQLTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDD 198

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L ++P  IG L  L  L +  NQ+  +P     L+ L +LR+  N L   P  I +
Sbjct: 199 N--RLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQ 256

Query: 370 M 370
           +
Sbjct: 257 L 257



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/231 (35%), Positives = 132/231 (57%), Gaps = 5/231 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL    + N+   P    +L+SL  L L +NR+ +VPA IG L+SL  L L+ N++  +
Sbjct: 171 LNLTKNQLTNV---PAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSV 227

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  IG L SL  L L  NQ++++P  + +L  LE LDL  N L+S+P  IG L ++ +L 
Sbjct: 228 PAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELY 287

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  LP  IGQ +SL +L +  NRL ++P  +G++ +L  L +  N +  +P  + 
Sbjct: 288 LSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIG 347

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
            L+SL    +  N+L S+P  +   T+LV+  + +N   L ++P +I  LE
Sbjct: 348 QLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSN--QLTSVPAAILELE 396



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 66/171 (38%), Positives = 103/171 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L LS N++ +VPA I  L SL++LDL  N++  +P  IG L ++  L
Sbjct: 227 VPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTEL 286

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP  + +L  LE+L LG N L+S+P  IG L SL  L +  N L  +P  I
Sbjct: 287 YLSYNQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEI 346

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           GQ +SL   +++ N+L +LP  VG++ +L    +R N +  +P  +  L +
Sbjct: 347 GQLTSLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSNQLTSVPAAILELEA 397


>gi|82780766|gb|ABB90552.1| leucine-rich repeat protein 1 [Triticum aestivum]
          Length = 365

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 5/261 (1%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSL 200
           KKLD+    +  +P     L  +  LDL  N + ++P ++ +RL+ +  LD+ SN L SL
Sbjct: 45  KKLDMSGLSMDTIPHLTMSLGHITTLDLSNNNLESIPESMIARLLNVVVLDVRSNQLKSL 104

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVL 259
           P+SIG L  L+ L V  N L+ LP TI +C +L EL  ++N+L  LP+ +G ++H+L  L
Sbjct: 105 PNSIGCLSKLRVLNVSGNLLQSLPATIEECRALEELNANFNQLTRLPDTLGFELHSLRRL 164

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           SV  N +  LP + S +++LR LD   N + ++PE L     L  +N+  NF  LR LP 
Sbjct: 165 SVNSNKLTSLPFSTSHMTALRALDARLNCIRALPEGLENLVNLEVLNVSQNFHFLRELPY 224

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +G L  L ELDIS N I VLPDS   L++L       NPL  PP +IVE    A+  Y+
Sbjct: 225 GLGLLTSLRELDISYNSISVLPDSMGCLAKLNKFSAVGNPLVCPPMDIVEQSLDAMRTYL 284

Query: 380 ADLVEKRDAKTQPVKQKKSWV 400
           +    + +      K+KK W+
Sbjct: 285 S---SRMNGTGVNAKKKKGWL 302


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  156 bits (394), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 164/313 (52%), Gaps = 24/313 (7%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  + L+LQ    + +  LP  + +L+ L  L L  N +  +P ++G L+ LK L++H N
Sbjct: 110 KQLKKLDLQG---NELAQLPPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNN 166

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            +  LP +IG L SL+ L+L  NQ+S L      LV L++L+L  N LS LP +IG L +
Sbjct: 167 DLFRLPSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTA 226

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L+KL++  N++  LP  I Q +SL+ L +  N L+ LP  + K+ +L  L + YN ++QL
Sbjct: 227 LQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQL 286

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF------------------ 311
           P  +  L  L++L++S+NEL+ +P  +   T L ++N+G N                   
Sbjct: 287 PIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQNLLTKLPPEIGQLNCLENLW 346

Query: 312 ---ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
                L  +P ++G L  L+   +SNNQ+  LP     LS L  L ++ N L   P  I 
Sbjct: 347 VYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLATLPLEIK 406

Query: 369 EMGAQAVVQYMAD 381
           ++     +Q   +
Sbjct: 407 QLSKLKSLQLTGN 419



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 157/276 (56%), Gaps = 25/276 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP S+G L+ L  L++  N +  +P+TIG L+SL KL+L  N++ EL     +L++L  L
Sbjct: 148 LPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLSELSKMTENLVNLQQL 207

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L+ NQ+S LP+A+ +L  L++L L  NN++ LP +I  L SLK L +  N LE+LP TI
Sbjct: 208 NLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGGNTLEQLPPTI 267

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD---- 283
            +  SL EL +DYN L+ LP  +  +  L+ L + YN +K+LP  +  L+ L++L+    
Sbjct: 268 CKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLTQLKQLNLGQN 327

Query: 284 -------------------VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
                              V  N+L ++P ++   T L +  + NN   L +LP  IG+L
Sbjct: 328 LLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNN--QLTSLPIEIGHL 385

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
             L  L + NNQ+  LP   + LS+L+ L++  NP+
Sbjct: 386 SHLSTLSLENNQLATLPLEIKQLSKLKSLQLTGNPM 421



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 174/325 (53%), Gaps = 44/325 (13%)

Query: 65  MCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLS 124
           +CC  + GE+++             K  R+ ++ + L +N+E L        +L++ DLS
Sbjct: 31  LCCGVEYGEEVT-------------KELRENHILSCLKNNLEVL-----YCQTLIACDLS 72

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
           +  +  +P  +  L +L++LDL  N I  L   I  L  L  LDL+GN+++ LP  + +L
Sbjct: 73  DKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQL 132

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS------------ 232
             LEEL LG N L+ LP S+G+L  LK L V  NDL  LP TIG+ +S            
Sbjct: 133 TGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLS 192

Query: 233 -----------LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
                      L++L + +N+L  LP A+G++  L+ L +  NN+  LP  +  L+SL+ 
Sbjct: 193 ELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKH 252

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N LE +P ++C   +L ++ +  N+  L+ LP  I  L+ L++L++S N+++ LP
Sbjct: 253 LSLGGNTLEQLPPTICKLKSLTELFLDYNY--LQQLPIEIKYLKHLQKLELSYNELKELP 310

Query: 342 DSFRMLSRLRVLRVQENPL-EVPPR 365
                L++L+ L + +N L ++PP 
Sbjct: 311 AEIGQLTQLKQLNLGQNLLTKLPPE 335



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 95/180 (52%), Gaps = 5/180 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP +I KL SL  L L  N +  +P  I  L  L+KL+L  N + ELP  IG L 
Sbjct: 258 NTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQLT 317

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L  N ++ LP  + +L  LE L +  N L+++P ++G L +L++ ++  N L  
Sbjct: 318 QLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTS 377

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG  S L  L ++ N+L  LP  + ++  L+ L +  N     P   S +   R+L
Sbjct: 378 LPIEIGHLSHLSTLSLENNQLATLPLEIKQLSKLKSLQLTGN-----PMAQSEIEKARKL 432


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  155 bits (393), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/274 (35%), Positives = 158/274 (57%), Gaps = 2/274 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  LDLS+NR+ +VPA IG L+SL+ L L+ N++  +P  I  L SL  L
Sbjct: 245 VPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVL 304

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LRGNQ++++P  + +L  L EL+L +N L+S+P  I  L SL+ L +  N L  +P  I
Sbjct: 305 GLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEI 364

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ +SL EL ++ N+L ++P  + ++ +L  L +  N +  +P  +  L+SL+ L +  N
Sbjct: 365 GRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLKGLALYGN 424

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T L ++++  N   L+++P  IG L  L+EL +++N +  +P     L
Sbjct: 425 QLTSVPAEIGQLTALTELSLQRN--KLKSVPAEIGQLATLKELWLNDNLLTSVPAEIGQL 482

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             L  L +  N L   P  I E+ A      + D
Sbjct: 483 RALTSLNLDRNRLTSVPAAIRELRAAGFYVQLDD 516



 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+L++L  LDL+ N++ +VP  IG L+SL K  L  N +  +P  IG L SL +L
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQWL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++++P  + +L  LE L L  N L+S+P  I  L SLK L +  N L  +P  I
Sbjct: 259 DLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL EL ++ N+L ++P  + ++ +L  L +  N +  +P  +  L+SL EL+++ N
Sbjct: 319 GQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNNN 378

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L  + +G N   L ++P  IG L  L+ L +  NQ+  +P     L
Sbjct: 379 QLTSVPAEIWQLTSLRGLFLGGN--RLTSVPAEIGRLTSLKGLALYGNQLTSVPAEIGQL 436

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L +Q N L+  P  I ++
Sbjct: 437 TALTELSLQRNKLKSVPAEIGQL 459



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 4/120 (3%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G++  LE+  V       +P  +  L++LRELD++ N+L SVP  +   T+LVK  +G N
Sbjct: 183 GRVVELELEDVGLTGA--VPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGN 240

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +L ++P  IG L  L+ LD+S+N++  +P     L+ L  L +  N L   P  I ++
Sbjct: 241 --ELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQL 298



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 3/68 (4%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +L+LQ   + ++   P  IG+L++L  L L++N + +VPA IG L +L  L+L  NR+  
Sbjct: 441 ELSLQRNKLKSV---PAEIGQLATLKELWLNDNLLTSVPAEIGQLRALTSLNLDRNRLTS 497

Query: 154 LPDSIGDL 161
           +P +I +L
Sbjct: 498 VPAAIREL 505


>gi|291240350|ref|XP_002740092.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1630

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/273 (36%), Positives = 158/273 (57%), Gaps = 17/273 (6%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           PD I KL +L  LDLS N I  +P TI  L +L++LDLH N +  +P  +G L+ L  L+
Sbjct: 111 PD-ISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLSTIPCEVGQLVHLTDLN 169

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQ++ LP+ L  L RL+ L +  N L S+   IG L+ L+ L +  N++ E+P +IG
Sbjct: 170 LSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTLDLSKNEIVEIPSSIG 229

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           +  SL+ L +D N+L  LP  +GK+  L+ +++  N I   P ++  L +L+ L+   N+
Sbjct: 230 KLKSLKMLHIDRNKLTNLPIDIGKLKNLQEINMSMNKILDFPESIGGLVNLQFLNAKNNQ 289

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS----- 343
           L+ +P S    + L ++N+ NN+  + +LPRSIG L+ L+ LDIS+N +  LP S     
Sbjct: 290 LKCLPVSFVNLSKLREVNVSNNY--IESLPRSIGKLKDLKYLDISHNHLESLPPSIGECI 347

Query: 344 ---------FRMLSRLRVLRVQENPLEVPPRNI 367
                    ++ML  L  L++  N ++V PR I
Sbjct: 348 LVSKHVITCWKMLRELTSLKMMRNQIKVLPREI 380



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/276 (29%), Positives = 146/276 (52%), Gaps = 24/276 (8%)

Query: 121  LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
            +D +   +  +P  IG  + LKKL+L +N +  LP+ + +L SL  L+L  N     P  
Sbjct: 816  IDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNSFENYPSV 875

Query: 181  LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS--------- 231
            LS L  L  L+L  N L+++     SL+++K+L    N+L  +P+T+ Q S         
Sbjct: 876  LSHLENLVTLNLNHNKLTAMH---ISLVNIKELDASHNNLVAIPNTVSQASQLTNKINDD 932

Query: 232  --------SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
                    SL+ LR+ +N+L ++P +V  +  L VL +  N ++++P  +  L +L+EL 
Sbjct: 933  PSITLDLKSLKVLRLTHNKLTSIP-SVDSLLELTVLDISDNKLQKIPKQIRILKNLKELY 991

Query: 284  VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
            +S NE+++VP  +   T L +++I NN  +L  LP  I N+  L+ L I  N++  LP +
Sbjct: 992  LSNNEIKTVPCEITHLTELHELDISNN--ELEHLPPEIDNMTNLQSLYIQRNRLMELPRT 1049

Query: 344  FRMLSRLRVLRVQEN-PLEVPPRNIVEMGAQAVVQY 378
               +  L+ +    N  +  PP ++ ++G   +++Y
Sbjct: 1050 IVHIDNLKYIDASGNSSMREPPADVCDLGINKIIEY 1085



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/289 (31%), Positives = 148/289 (51%), Gaps = 32/289 (11%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-----GLSSL------------ 141
           K+M N I+ LP  IG LSSL +L + +N I   P  I      GL               
Sbjct: 367 KMMRNQIKVLPREIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYWQKKDQELLKNV 426

Query: 142 ----KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
               +K+ L  N +  +P SI     +  LDL  N++S LP+ + +L +LE LD+ +NNL
Sbjct: 427 KPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLDISNNNL 486

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
             LP   GS   LK L +  N+L E P  +    +++++ +  N L+ +   +  +  L 
Sbjct: 487 IDLP---GSFSDLKILNLSRNNLTEFPDNL---ENIQQIDISQNCLQNIHIGMN-LSKLT 539

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            +++R   +K  P  + S S L  L++S N +E +P  +C    L  +++  N   +R++
Sbjct: 540 HVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCEN--KIRSI 597

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR 365
           P+ IGN+  L+EL ISNN+I  +P+    L  L +L ++ N L E+PP+
Sbjct: 598 PKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQ 646



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/288 (29%), Positives = 132/288 (45%), Gaps = 72/288 (25%)

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS------ 203
           ++  LP SI +      L+LR N  S LP  +S L +L EL+L  N + ++P S      
Sbjct: 35  KLASLPPSIAEYKDCERLNLRCNSFSTLPPEISHLKKLNELNLSENCIENIPMSLYKLTA 94

Query: 204 ------------------IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
                             I  L++L+KL +  N++EE+P TI    +L+EL + YN L  
Sbjct: 95  LTVLNMNGNEIIGKLQPDISKLVNLQKLDLSVNNIEEIPRTILNLCALQELDLHYNMLST 154

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS-----------------------SLREL 282
           +P  VG++  L  L++  N + +LP T+ +L                         LR L
Sbjct: 155 IPCEVGQLVHLTDLNLSQNQLTELPITLGNLKRLQSLRVSDNKLLSVSMEIGMLVELRTL 214

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS--------- 333
           D+S NE+  +P S+    +L  ++I  N   L  LP  IG L+ L+E+++S         
Sbjct: 215 DLSKNEIVEIPSSIGKLKSLKMLHIDRN--KLTNLPIDIGKLKNLQEINMSMNKILDFPE 272

Query: 334 --------------NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
                         NNQ++ LP SF  LS+LR + V  N +E  PR+I
Sbjct: 273 SIGGLVNLQFLNAKNNQLKCLPVSFVNLSKLREVNVSNNYIESLPRSI 320



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 137/305 (44%), Gaps = 43/305 (14%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NIE +P  I  L  L  +D+ EN+I ++P  IG ++ LK+L +  N+I  +P+ +  L 
Sbjct: 569 NNIEEIPPGICNLQRLAIIDVCENKIRSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLR 628

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LD+R N +  LP     L  L+ L L  N  +  P +I  L  L KL +  N++  
Sbjct: 629 ELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTS 688

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE- 281
           +P TIG+  SL E+ +D N +  LP  + ++  +++  +       L   ++ LS L++ 
Sbjct: 689 IPSTIGRLKSLEEMSIDGNIITELPAELLELQIIKLQLIENQQDTPLKDFVAELSRLKQN 748

Query: 282 -----LDVSFNELESVPESLC-------FATTLVKMNI---GNN---------------- 310
                +        S   S+C        ++T V  N+   G N                
Sbjct: 749 GSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQNAIKKMWDELDIETLRR 808

Query: 311 ---------FA--DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
                    FA  DL+ LP  IG    L++L++ +N +  LP+    L+ L  L + +N 
Sbjct: 809 LEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLADNS 868

Query: 360 LEVPP 364
            E  P
Sbjct: 869 FENYP 873



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 145/326 (44%), Gaps = 70/326 (21%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG--------------L 138
           R++N+ N     IE LP SIGKL  L  LD+S N + ++P +IG               L
Sbjct: 304 REVNVSNNY---IESLPRSIGKLKDLKYLDISHNHLESLPPSIGECILVSKHVITCWKML 360

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYL------------------------------- 167
             L  L +  N+I  LP  IG L SL  L                               
Sbjct: 361 RELTSLKMMRNQIKVLPREIGYLSSLSTLVIDDNPIREPPMVICNEGILGLQKYWQKKDQ 420

Query: 168 -------------DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
                         L+ N ++ +P ++S+   +++LDL  N LS LP  +  L  L+ L 
Sbjct: 421 ELLKNVKPNSEKVSLKQNDLTYIPKSISQYTHIQQLDLSRNKLSYLPLEMCQLTQLENLD 480

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N+L +LP   G  S L+ L +  N L   P+ +  I  +++     N ++ +   M+
Sbjct: 481 ISNNNLIDLP---GSFSDLKILNLSRNNLTEFPDNLENIQQIDI---SQNCLQNIHIGMN 534

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            LS L  +++   +L++ P  LC A+ L  +N+  N  ++  +P  I NL+ L  +D+  
Sbjct: 535 -LSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCN--NIEEIPPGICNLQRLAIIDVCE 591

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL 360
           N+IR +P     ++RL+ L +  N +
Sbjct: 592 NKIRSIPKEIGNMNRLKELHISNNKI 617



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 103/199 (51%), Gaps = 1/199 (0%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           LS L  +++ + ++   P  +   S L  L+L  N I E+P  I +L  L  +D+  N+I
Sbjct: 535 LSKLTHVNMRDTKLKNFPLQLCSASELYHLNLSCNNIEEIPPGICNLQRLAIIDVCENKI 594

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
            ++P  +  + RL+EL + +N + ++P+ +  L  L  L +  N+L+ELP   G+   L+
Sbjct: 595 RSIPKEIGNMNRLKELHISNNKIGNIPEPLCKLRELTLLDIRNNNLKELPPQFGELHELQ 654

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L++  N     P A+ K+  L  L +  NN+  +P+T+  L SL E+ +  N +  +P 
Sbjct: 655 ILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMTSIPSTIGRLKSLEEMSIDGNIITELPA 714

Query: 295 SLCFATTLVKMNIGNNFAD 313
            L     ++K+ +  N  D
Sbjct: 715 EL-LELQIIKLQLIENQQD 732



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 87/304 (28%), Positives = 139/304 (45%), Gaps = 52/304 (17%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R+L L +   +N++ LP   G+L  L  L LS N     P  I  L+ L KL L  N + 
Sbjct: 628 RELTLLDIRNNNLKELPPQFGELHELQILQLSGNVFNEFPPAISKLTKLVKLYLSGNNMT 687

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS-LPDSIGSLISLK 211
            +P +IG L SL  + + GN I+ LP  L  L ++ +L L  N   + L D +  L  LK
Sbjct: 688 SIPSTIGRLKSLEEMSIDGNIITELPAELLEL-QIIKLQLIENQQDTPLKDFVAELSRLK 746

Query: 212 ---------------------------KLIVETNDLEELPHTIGQCS-----------SL 233
                                      K  V + D+ +     GQ +           +L
Sbjct: 747 QNGSTVAISPRIINRNSKLNSICVTGIKTGVSSTDVCKNVCMKGQNAIKKMWDELDIETL 806

Query: 234 RELRVDY------NR-LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           R L  D       NR L+ LP  +G+   L+ L+++ N++  LP  +S+L+SL  L+++ 
Sbjct: 807 RRLEEDTSDIDFANRDLQKLPGVIGRFAELKKLNLKSNHLDTLPEEVSNLTSLESLNLAD 866

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N  E+ P  L     LV +N+ +N   L A+  S+ N   ++ELD S+N +  +P++   
Sbjct: 867 NSFENYPSVLSHLENLVTLNLNHN--KLTAMHISLVN---IKELDASHNNLVAIPNTVSQ 921

Query: 347 LSRL 350
            S+L
Sbjct: 922 ASQL 925



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 81/167 (48%), Gaps = 18/167 (10%)

Query: 115  LSSLVSLDLSENRIVAVPATIG-----------------GLSSLKKLDLHANRIIELPDS 157
            L ++  LD S N +VA+P T+                   L SLK L L  N++  +P S
Sbjct: 899  LVNIKELDASHNNLVAIPNTVSQASQLTNKINDDPSITLDLKSLKVLRLTHNKLTSIP-S 957

Query: 158  IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
            +  LL L  LD+  N++  +P  +  L  L+EL L +N + ++P  I  L  L +L +  
Sbjct: 958  VDSLLELTVLDISDNKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISN 1017

Query: 218  NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            N+LE LP  I   ++L+ L +  NRL  LP  +  I  L+ +    N
Sbjct: 1018 NELEHLPPEIDNMTNLQSLYIQRNRLMELPRTIVHIDNLKYIDASGN 1064



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 74/153 (48%), Gaps = 5/153 (3%)

Query: 103  DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            + ++ +P  I  L +L  L LS N I  VP  I  L+ L +LD+  N +  LP  I ++ 
Sbjct: 972  NKLQKIPKQIRILKNLKELYLSNNEIKTVPCEITHLTELHELDISNNELEHLPPEIDNMT 1031

Query: 163  SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE- 221
            +L  L ++ N++  LP  +  +  L+ +D   N+    P +    + + K+I   N+ E 
Sbjct: 1032 NLQSLYIQRNRLMELPRTIVHIDNLKYIDASGNSSMREPPADVCDLGINKIIEYWNNKEK 1091

Query: 222  ---ELPHTIGQCSSLRELR-VDYNRLKALPEAV 250
               +L  T+  C     +  +D  RLK L ++V
Sbjct: 1092 EKQQLVFTLQPCQDDTYIDLLDGFRLKVLNKSV 1124


>gi|260819644|ref|XP_002605146.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
 gi|229290477|gb|EEN61156.1| hypothetical protein BRAFLDRAFT_80919 [Branchiostoma floridae]
          Length = 844

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/306 (36%), Positives = 165/306 (53%), Gaps = 16/306 (5%)

Query: 76  SLIKLASLIEVSSK----------KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
           S+ KL S + VS+           KGT  +N+ +   + I  LP+ + KL  LVSL+LS 
Sbjct: 177 SIYKLHSSVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSH 236

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRL 184
           N++  +P TIG L  L+ LDL  N++  LPD I +L   LV L    N+++ LP  +  L
Sbjct: 237 NQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNL 296

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            ++  LDL  N L+SLP   G   S+  L +  N L  L    G    L  L   YN L 
Sbjct: 297 RKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSHNQLSSLERLAG-LGKLESLNASYNVLT 355

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           +LPE VG + +L VL + +N IK++P  +  L  L+ +DVS N+LE++P++L     L +
Sbjct: 356 SLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSR 415

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV-- 362
           +N  +N   L ALP ++  L  L+ LD+S N++  LP+ F  L  L  L V +N L V  
Sbjct: 416 LNASHNA--LTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLT 473

Query: 363 PPRNIV 368
            PR++ 
Sbjct: 474 APRSLT 479



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 106/344 (30%), Positives = 169/344 (49%), Gaps = 61/344 (17%)

Query: 103 DNIEWLPDSIGKLSS-LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + +++LPD I  L   LV+L  S NR+  +P  I  L  +  LDL  N++  LP   G  
Sbjct: 260 NQLDFLPDDICNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKT 319

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            S+V LDL  NQ+S+L   L+ L +LE L+   N L+SLP+ +GSL+SL+ L +  N+++
Sbjct: 320 DSVVSLDLSHNQLSSLE-RLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIK 378

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E+P  IG    L+ + V +N+L+ LP+ +G    L  L+  +N +  LPT M  L +L  
Sbjct: 379 EMPAKIGGLRHLKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDA 438

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN------------------------------- 310
           LDVS N+LE++PE   F  +L  +++ +N                               
Sbjct: 439 LDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDN 498

Query: 311 -------FADLRA-------------LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                    DLR+             LP +I NL  LE+ +  NN++  LP +F  L +L
Sbjct: 499 KSLIVRIGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQL 558

Query: 351 RVLRVQENPL-EVPPR-------NIVEMGAQAVVQYMADLVEKR 386
           + L +  N L  +PP+       + ++     V ++M  LV+ R
Sbjct: 559 QHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLR 602



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 5/202 (2%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K LD   NR+  +P  IG L SL  LD+  N + A+P ++SRL  L  ++  +N + SLP
Sbjct: 70  KYLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLP 129

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
            +I    +L  +    N L+ LP  IG  SS+  +    N +K LP+++ K+H+   ++V
Sbjct: 130 KTIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHS--SVNV 187

Query: 262 RYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
             N ++ LP  ++  + S+  +D S N + ++PE L     LV +N+ +N  D   +P +
Sbjct: 188 SNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQRLVSLNLSHNQLD--CIPPT 245

Query: 321 IGNLEMLEELDISNNQIRVLPD 342
           IG L  LE LD+S+NQ+  LPD
Sbjct: 246 IGTLRYLEFLDLSHNQLDFLPD 267



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 46/315 (14%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L++ N   + +  +P S+ +L  L S++ S N+I ++P TI   S+L  ++   N++ 
Sbjct: 93  RSLDVTN---NTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLK 149

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRL----------------------VRLEEL 190
            LP +IG   S+ Y+D   N I  LP ++ +L                        +  +
Sbjct: 150 TLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHSSVNVSNNQLRTLPAVIAKGTCSINVI 209

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           D   N + +LP+ +  L  L  L +  N L+ +P TIG    L  L + +N+L  LP+ +
Sbjct: 210 DASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDFLPDDI 269

Query: 251 GKI-HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
             + H L  L   +N + QLP  + +L  +  LD+S N+L S+P       ++V +++ +
Sbjct: 270 CNLRHCLVTLHASHNRLTQLPDQIHNLRKIHVLDLSENKLTSLPAKFGKTDSVVSLDLSH 329

Query: 310 N--------------------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           N                    +  L +LP  +G+L  L  LDI++N+I+ +P     L  
Sbjct: 330 NQLSSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRH 389

Query: 350 LRVLRVQENPLEVPP 364
           L+ + V  N LE  P
Sbjct: 390 LKNVDVSHNKLETLP 404



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 133/267 (49%), Gaps = 10/267 (3%)

Query: 104 NIEWLPDSIGKLSSLV----SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           N++ LP+ + +   L      LD   NR+  VP  IG L SL+ LD+  N +  +P S+ 
Sbjct: 51  NMKALPEEVYENEELAMKTKYLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVS 110

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L  ++   NQI +LP  + +   L  ++   N L +LP +IGS  S+  +   +N 
Sbjct: 111 RLKYLTSIEASTNQIKSLPKTIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNS 170

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEVLSVRYNNIKQLPTTMSSLSS 278
           ++ LP +I +  S   + V  N+L+ LP  + K   ++ V+    N I  LP  +  L  
Sbjct: 171 IKTLPKSIYKLHS--SVNVSNNQLRTLPAVIAKGTCSINVIDASRNLIHTLPEGLDKLQR 228

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL-EMLEELDISNNQI 337
           L  L++S N+L+ +P ++     L  +++ +N  D   LP  I NL   L  L  S+N++
Sbjct: 229 LVSLNLSHNQLDCIPPTIGTLRYLEFLDLSHNQLDF--LPDDICNLRHCLVTLHASHNRL 286

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPP 364
             LPD    L ++ VL + EN L   P
Sbjct: 287 TQLPDQIHNLRKIHVLDLSENKLTSLP 313



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 33/319 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRI------------------VAVPATIGG------- 137
           + +E LP+    L SL  LD+S+N++                  + +P  + G       
Sbjct: 444 NKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPRSLTCLKVAGNPLRLPTRVAGDNKSLIV 503

Query: 138 -----LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
                L SL +LD+    +  LP +I +L  L   + R N++++LP    RL +L+ LDL
Sbjct: 504 RIGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNARNNKLNSLPANFHRLRQLQHLDL 563

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N L++LP  +G    L  L    N +EE   ++ +  SL+ L    N+L +LP+  G 
Sbjct: 564 AHNELTALPPKLGDFAYLSHLDTSNNQVEEFMPSLVKLRSLQYLNFSNNKLTSLPDNFGT 623

Query: 253 IHTLEVLSVRYNNIKQLPTT-MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           +  L  L +  N + +LP   +  L+SL  L+ S N++ ++P  + +   +  +N+  N 
Sbjct: 624 LSQLTTLDLSANQLPELPNDRIDILASLLVLNASGNQVTAIPMDMPYLYRIQVLNLSANV 683

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
             ++ALP  I  ++ L  LD+S+N +  +P++   L  ++ + +  N L   P+ +  + 
Sbjct: 684 --IKALPGDIWRMKSLTTLDLSDNMLEGIPETITKLPSIKSVDISNNKLRSFPKTMERLR 741

Query: 372 AQAVVQYMADLVEKRDAKT 390
            +A V        K++ +T
Sbjct: 742 QKASVNTSDQDPNKKEPET 760



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 145/330 (43%), Gaps = 46/330 (13%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
           C V        L +L   I    K    DL+ +NKL      LP   GK  S+VSLDLS 
Sbjct: 275 CLVTLHASHNRLTQLPDQIHNLRKIHVLDLS-ENKLTS----LPAKFGKTDSVVSLDLSH 329

Query: 126 NRI----------------------VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++                       ++P  +G L SL+ LD+  N I E+P  IG L  
Sbjct: 330 NQLSSLERLAGLGKLESLNASYNVLTSLPEGVGSLVSLRVLDIAHNEIKEMPAKIGGLRH 389

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  +D+  N++  LP  L     L  L+   N L++LP ++  L +L  L V  N LE L
Sbjct: 390 LKNVDVSHNKLETLPDTLGDDQLLSRLNASHNALTALPTNMRKLRTLDALDVSRNKLEAL 449

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS-------- 275
           P       SL  L V  N+L  L        +L  L V  N ++ LPT ++         
Sbjct: 450 PEPFHFLRSLSFLDVSDNKLPVLTAP----RSLTCLKVAGNPLR-LPTRVAGDNKSLIVR 504

Query: 276 ----LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L SL ELD+S  EL ++P ++C    L K N  NN   L +LP +   L  L+ LD
Sbjct: 505 IGDDLRSLTELDISNIELTTLPTTICNLRFLEKFNARNN--KLNSLPANFHRLRQLQHLD 562

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           +++N++  LP      + L  L    N +E
Sbjct: 563 LAHNELTALPPKLGDFAYLSHLDTSNNQVE 592



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 107/205 (52%), Gaps = 3/205 (1%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           YLD + N++  +P  + RL  L  LD+ +N + ++P S+  L  L  +   TN ++ LP 
Sbjct: 71  YLDAQNNRLRRVPKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPK 130

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           TI + S+L  +    N+LK LP+ +G   ++  +    N+IK LP ++  L S   ++VS
Sbjct: 131 TIHKASALTTINAAGNKLKTLPKNIGSSSSITYIDASSNSIKTLPKSIYKLHS--SVNVS 188

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P  +   T  + + I  +   +  LP  +  L+ L  L++S+NQ+  +P +  
Sbjct: 189 NNQLRTLPAVIAKGTCSINV-IDASRNLIHTLPEGLDKLQRLVSLNLSHNQLDCIPPTIG 247

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L  L +  N L+  P +I  +
Sbjct: 248 TLRYLEFLDLSHNQLDFLPDDICNL 272



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 81/303 (26%), Positives = 143/303 (47%), Gaps = 33/303 (10%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI------- 151
           N   + +  LP ++ KL +L +LD+S N++ A+P     L SL  LD+  N++       
Sbjct: 417 NASHNALTALPTNMRKLRTLDALDVSRNKLEALPEPFHFLRSLSFLDVSDNKLPVLTAPR 476

Query: 152 -----------IELPDSIG------------DLLSLVYLDLRGNQISALPVALSRLVRLE 188
                      + LP  +             DL SL  LD+   +++ LP  +  L  LE
Sbjct: 477 SLTCLKVAGNPLRLPTRVAGDNKSLIVRIGDDLRSLTELDISNIELTTLPTTICNLRFLE 536

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           + +  +N L+SLP +   L  L+ L +  N+L  LP  +G  + L  L    N+++    
Sbjct: 537 KFNARNNKLNSLPANFHRLRQLQHLDLAHNELTALPPKLGDFAYLSHLDTSNNQVEEFMP 596

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP-ESLCFATTLVKMNI 307
           ++ K+ +L+ L+   N +  LP    +LS L  LD+S N+L  +P + +    +L+ +N 
Sbjct: 597 SLVKLRSLQYLNFSNNKLTSLPDNFGTLSQLTTLDLSANQLPELPNDRIDILASLLVLNA 656

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   + A+P  +  L  ++ L++S N I+ LP     +  L  L + +N LE  P  I
Sbjct: 657 SGN--QVTAIPMDMPYLYRIQVLNLSANVIKALPGDIWRMKSLTTLDLSDNMLEGIPETI 714

Query: 368 VEM 370
            ++
Sbjct: 715 TKL 717



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 10/124 (8%)

Query: 266 IKQLPTT----MSSLSSLRELDVSFNELESVPESLC----FATTLVKMNIGNNFADLRAL 317
           IK LP T    M +      ++ S   ++++PE +      A     ++  NN   LR +
Sbjct: 25  IKSLPRTVLQFMDTSDGHIRMNFSTCNMKALPEEVYENEELAMKTKYLDAQNN--RLRRV 82

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+ IG LE L  LD++NN +R +P S   L  L  +    N ++  P+ I +  A   + 
Sbjct: 83  PKGIGRLESLRSLDVTNNTVRAIPGSVSRLKYLTSIEASTNQIKSLPKTIHKASALTTIN 142

Query: 378 YMAD 381
              +
Sbjct: 143 AAGN 146


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 150/280 (53%), Gaps = 2/280 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  +P  +  L+ L  LDLS N +  +P  I  L +L  L L  N I  LPD+I  L 
Sbjct: 35  DKLTEIPAEVFALTWLEELDLSRNEMTTLPDAIAKLQNLSTLYLSHNGITTLPDAIAQLQ 94

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N I+ LP A+++L  L  L+L  N +++LPD+I  L +L  L +  N +  
Sbjct: 95  NLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKITTLPDAIAKLHNLTTLNLSVNRIRT 154

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +  +L  L ++ NR+  LP+A+ K+H L  L +  N I  LP  ++ L +L  L
Sbjct: 155 LPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSL 214

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N + ++P+++     L  +++  N   +  LP +I  L+ L  LD+  N+I  LPD
Sbjct: 215 SLWNNGITTLPDAIAKLHNLTSLDLSGN--RITTLPDAIAKLQNLSTLDLRGNEITTLPD 272

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           +   L  L  L ++ NP+E PP  +V+ G +A+  Y   L
Sbjct: 273 AIAQLHNLTSLDLRRNPIEKPPLEVVKKGIEAIRDYFRQL 312


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  155 bits (393), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  NR+  +P  IG L +L+ L
Sbjct: 87  EIGQLKNLRKLNLYD---NQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N+   +P  IG L +L  L L  NQ++ALP  + ++  L+ L LGSN L+ LP  I
Sbjct: 144 ELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+KL +  N    LP  + +  +L+EL +  NRL  LP  +G++  L VL + +N
Sbjct: 204 GQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +   +  L +L+ L++ +N+L ++P  +     L  + +GNN   L ALP  IG L
Sbjct: 264 QFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNN--QLTALPNEIGQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L + NNQ+  LP+    L +L+ L +  N L   P  I ++
Sbjct: 322 QNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQL 367



 Score =  155 bits (392), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 150/253 (59%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+L+ N+   +   IG L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 245 LPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSL 304

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ALP  + +L  L+ L LG+N L++LP+ IG L  L++L + TN L  LP+ I
Sbjct: 305 YLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEI 364

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LP  +G++  L+ L +R N +  L   +  L +L+ LD+  N
Sbjct: 365 GQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN 424

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +++G+N   L  LP+ IG L+ L+  +++NNQ+  LP     L
Sbjct: 425 QLTTFPKEIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 482

Query: 348 SRLRVLRVQENPL 360
             L+ L + +N L
Sbjct: 483 QNLQELYLIDNQL 495



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 161/286 (56%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 64  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKEL 120

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +NR+  LP+ IG L +L  L+L  NQ   +P  + +L  L+ L LG+N L++LP+ I
Sbjct: 121 YLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEI 180

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G + +L+ L + +N L  LP  IGQ  +LR+L +  N+   LP+ V K+  L+ L +  N
Sbjct: 181 GQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSN 240

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +LR L+++ N+ +++ + +     L  +N+G  +  L ALP  IG L
Sbjct: 241 RLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLG--YNQLTALPNEIGQL 298

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L + NNQ+  LP+    L  L+ L +  N L   P  I ++
Sbjct: 299 QNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQL 344



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 152/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  NR+  +P  IG L +L+ L
Sbjct: 202 EIGQLKNLRKLNLYD---NQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVL 258

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N+   +   IG L +L  L+L  NQ++ALP  + +L  L+ L LG+N L++LP+ I
Sbjct: 259 ELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEI 318

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP+ IGQ   L+EL +  NRL  LP  +G++  L+ L +  N
Sbjct: 319 GQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSN 378

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +  N L ++ + +     L  +++ NN   L   P+ I  L
Sbjct: 379 QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQL 436

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP     L  L+V  +  N L   P+ I ++
Sbjct: 437 KNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQL 482



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L +N+   +P  +  L +LK+L L +NR+  LP+ IG L +L  L
Sbjct: 199 LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ   +   + +L  L+ L+LG N L++LP+ IG L +L+ L +  N L  LP+ I
Sbjct: 259 ELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+L ALP  +G++  L+ L +  N +  LP  +  L +L+EL +  N
Sbjct: 319 GQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSN 378

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P  +     L  + + +N   L  L + I  L+ L+ LD+ NNQ+   P     L
Sbjct: 379 QLTILPNEIGQLKNLQTLYLRSN--RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQL 436

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+VL +  N L   P+ I ++
Sbjct: 437 KNLQVLDLGSNQLTTLPKEIGQL 459



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 142/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L +  
Sbjct: 111 VEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGN 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G+I  L+ L +  N +  LP  +  L +LR+L++  N+   +P+ +    
Sbjct: 171 NQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLE 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ +G+N   L  LP  IG L+ L  L++++NQ + +      L  L+ L +  N L
Sbjct: 231 NLKELYLGSN--RLTTLPNEIGQLKNLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQL 288

Query: 361 EVPPRNIVEM 370
              P  I ++
Sbjct: 289 TALPNEIGQL 298



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 151/291 (51%), Gaps = 25/291 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  + +P  IG+L +L +L L  N++ A+P  IG + +L+ L L +NR+  LP  IG L 
Sbjct: 148 NQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTILPKEIGQLK 207

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK----------- 211
           +L  L+L  NQ + LP  + +L  L+EL LGSN L++LP+ IG L +L+           
Sbjct: 208 NLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKT 267

Query: 212 ------------KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
                        L +  N L  LP+ IGQ  +L+ L +  N+L ALP  +G++  L+ L
Sbjct: 268 ISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSL 327

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L  L+EL +S N L ++P  +     L ++ +G+N   L  LP 
Sbjct: 328 YLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSN--QLTILPN 385

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG L+ L+ L + +N++  L      L  L+ L +  N L   P+ I ++
Sbjct: 386 EIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQL 436



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 112/198 (56%), Gaps = 2/198 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+  + N  +  LP+ IG+L +L SL L  N++ A+P  IG L  L++L L  NR+  
Sbjct: 300 NLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTT 359

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+ IG L +L  L L  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L
Sbjct: 360 LPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 419

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L   P  I Q  +L+ L +  N+L  LP+ +G++  L+V  +  N +  LP  +
Sbjct: 420 DLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEI 479

Query: 274 SSLSSLRELDVSFNELES 291
             L +L+EL +  N+L S
Sbjct: 480 GQLQNLQELYLIDNQLSS 497



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 116/218 (53%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  NRL  LP  +G++  L VL + +N  K +P  
Sbjct: 97  LNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L +  N+L ++P  +     L  + +G+N   L  LP+ IG L+ L +L++
Sbjct: 157 IGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSN--RLTILPKEIGQLKNLRKLNL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ  +LP     L  L+ L +  N L   P  I ++
Sbjct: 215 YDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQL 252



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 78/147 (53%), Gaps = 5/147 (3%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +  NR K LP+ +GK+  L+ L++  N +  LP  +  L +LR+L++  N+   +
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           P+ +     L ++ +G+N   L  LP  IG L+ L  L++++NQ + +P     L  L+ 
Sbjct: 108 PKEVEKLENLKELYLGSN--RLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           L +  N L   P    E+G    +Q++
Sbjct: 166 LYLGNNQLTALPN---EIGQIQNLQFL 189


>gi|443290345|ref|ZP_21029439.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
 gi|385886672|emb|CCH17513.1| putative Leucine-rich repeat protein [Micromonospora lupini str.
           Lupac 08]
          Length = 1135

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 159/278 (57%), Gaps = 6/278 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD++   ++L  L +  NR+  +P  + G ++L +L++  N++ ELPD++    +L  L
Sbjct: 106 LPDAVAAWTALKRLVMDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERL 165

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+  NQ+ ALP A++   RL+ L L  N L++LPD++ +  +L +L +++N L  LP  +
Sbjct: 166 DMDYNQVRALPDAVAAWTRLDVLYLDDNELTALPDAVAAWTALNELHLDSNQLTALPDAV 225

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++L EL +D N+L  LPEAV     L  L +R N +  LP  +++ ++L  LD+  N
Sbjct: 226 AAWTALNELHLDDNQLTVLPEAVAAWTELSGLHLRSNRLTALPDAVAAWTALTLLDLYDN 285

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+++   T L  + + +N   L ALP ++G    L +L +  N +  LP +   L
Sbjct: 286 QLTVLPDAVAAWTDLTDLYLESN--RLTALPDAVGGWNALTDLFMEGNDLTALPGAIGRL 343

Query: 348 SRLRVLRVQENPLEVPPRNIVE--MGAQAVVQYMADLV 383
           ++LR+L V  NPL  PP  +     G +A++ ++ D+ 
Sbjct: 344 AKLRMLVVDGNPL--PPEVLAAETEGTEALLAFLRDVA 379



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 131/251 (52%), Gaps = 7/251 (2%)

Query: 123 LSENRIVA----VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           + + RIV     + A   G  +L  L L    + EL         +V LDL  N +  LP
Sbjct: 1   MDDGRIVEARQRIDAATTGHVNLGGLGLTPEDLTELLRDTPAFADVVSLDLANNNLGTLP 60

Query: 179 VAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
            A+ +    L  LDL SN L++LPD++ +  +L++L++  N L  LP  +   ++L+ L 
Sbjct: 61  DAVAAAWTSLIVLDLSSNGLTALPDTVAAWTALERLVLSGNRLTALPDAVAAWTALKRLV 120

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           +D NRL  LP AV     L  L+V  N + +LP  +++ ++L  LD+ +N++ ++P+++ 
Sbjct: 121 MDRNRLGELPHAVAGWTALTQLNVDRNKLGELPDAVAAWTALERLDMDYNQVRALPDAVA 180

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
             T L  + + +N  +L ALP ++     L EL + +NQ+  LPD+    + L  L + +
Sbjct: 181 AWTRLDVLYLDDN--ELTALPDAVAAWTALNELHLDSNQLTALPDAVAAWTALNELHLDD 238

Query: 358 NPLEVPPRNIV 368
           N L V P  + 
Sbjct: 239 NQLTVLPEAVA 249



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 30/108 (27%), Positives = 57/108 (52%), Gaps = 5/108 (4%)

Query: 275 SLSSLRELDVSFNELESVPESLCFA-TTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           + + +  LD++ N L ++P+++  A T+L+ +++ +N   L ALP ++     LE L +S
Sbjct: 42  AFADVVSLDLANNNLGTLPDAVAAAWTSLIVLDLSSN--GLTALPDTVAAWTALERLVLS 99

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
            N++  LPD+    + L+ L +  N L   P  +   G  A+ Q   D
Sbjct: 100 GNRLTALPDAVAAWTALKRLVMDRNRLGELPHAVA--GWTALTQLNVD 145


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 154/258 (59%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  I +L +L  L L +N++  +P  IG L +L++L L  N+++ LP+ IG L 
Sbjct: 125 NQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLK 184

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQI  +P  + +L +L+ L LG+N L++LP+ IG L  L++L + TN L  
Sbjct: 185 NLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTT 244

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ  +L++L +  N+L  LP  +G++  L+ L +R N +  L   +  L +L+ L
Sbjct: 245 LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 304

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L + P+ +     L  +++G+N   L  LP+ IG L+ L+  +++NNQ+  LP+
Sbjct: 305 DLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPN 362

Query: 343 SFRMLSRLRVLRVQENPL 360
               L  L+ L + +N L
Sbjct: 363 EIGQLQNLQELYLIDNQL 380



 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L+L  N++  LP+ I  L +L  L
Sbjct: 61  LPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+EL L  N L++LP  IG L +L++L +  N L  LP  I
Sbjct: 121 YLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN++K +P+ + K+  L+ L +  N +  LP  +  L  L+EL +S N
Sbjct: 181 GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  +     L  + +G+N   L  LP  IG L+ L+ L + +N++  L      L
Sbjct: 241 RLTTLPNEIGQLQNLQDLYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQL 298

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 299 QNLKSLDLWNNQLTTFPKEIEQL 321



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 140/268 (52%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+ I +L +L  L LS N++  +P  I  L +L++L L  N++  LP  IG L 
Sbjct: 102 NQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLK 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ+  LP  + +L  L+ L+L  N + ++P  I  L  L+ L +  N L  
Sbjct: 162 NLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTA 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ   L+EL +  NRL  LP  +G++  L+ L +  N +  LP  +  L +L+ L
Sbjct: 222 LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTL 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++ + +     L  +++ NN   L   P+ I  L+ L+ LD+ +NQ+  LP 
Sbjct: 282 YLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPK 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+V  +  N L   P  I ++
Sbjct: 340 EIGQLKNLQVFELNNNQLTTLPNEIGQL 367



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 25/242 (10%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L ++I + L +  LDL   ++  LP  + RL  L+EL L  N L +LP  IG L +L+
Sbjct: 36  MDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L+ LP  I Q  +L+ L + YN+LK LP+ + ++  L+ L +R N +  LPT
Sbjct: 96  VLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPT 155

Query: 272 TMSSLSSLRE-----------------------LDVSFNELESVPESLCFATTLVKMNIG 308
            +  L +L+                        L++S+N+++++P+ +     L  + +G
Sbjct: 156 EIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLG 215

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NN   L ALP  IG L+ L+EL +S N++  LP+    L  L+ L +  N L + P  I 
Sbjct: 216 NN--QLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 273

Query: 369 EM 370
           ++
Sbjct: 274 QL 275



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 105/189 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++ A+P  IG L  L++L L  NR+  LP+ IG L 
Sbjct: 194 NQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  
Sbjct: 254 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTT 313

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  I Q  +L+ L +  N+L  LP+ +G++  L+V  +  N +  LP  +  L +L+EL
Sbjct: 314 FPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPNEIGQLQNLQEL 373

Query: 283 DVSFNELES 291
            +  N+L S
Sbjct: 374 YLIDNQLSS 382


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 160/270 (59%), Gaps = 3/270 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L++L +L+L+ N++ ++PA IG L+SL++L+L +N++  +P  IG L SL  L
Sbjct: 78  LPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQL 137

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++++P  + +L  L+EL L    L SLP  I  L SL+ L ++ N L  +P  I
Sbjct: 138 HLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEI 197

Query: 228 GQCSSLRELRVDYN-RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           GQ +SLREL +  N RL ++P  +G++ +L+VL +  N +   P  +  L+SL EL +  
Sbjct: 198 GQLTSLRELHLGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHD 257

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+  SVP  +   T+L ++ +G N   L ++P  IG L  L+EL + +N++  +P     
Sbjct: 258 NQFTSVPAEIGQLTSLRELRLGGN--QLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQ 315

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           L+ L+ L +++N L   P  + E+ A    
Sbjct: 316 LTSLKKLYLRDNLLTSVPTVVRELRAAGCT 345



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 118/208 (56%), Gaps = 2/208 (0%)

Query: 164 LVYLDLRG-NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +V L+L G   I ALP  + RL  L  L+L SN L SLP  IG L SL++L + +N L  
Sbjct: 64  VVELELEGFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTS 123

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG  +SLR+L +  N+L ++P  +G++ +L+ LS+    ++ LP  +  L+SL  L
Sbjct: 124 VPAEIGLLTSLRQLHLICNQLTSVPAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVL 183

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++  N L SVP  +   T+L ++++G N+  L ++P  IG L  L+ LD+S NQ+   P 
Sbjct: 184 ELQNNHLTSVPAEIGQLTSLRELHLGGNW-RLTSVPAEIGQLTSLQVLDLSRNQLTSAPA 242

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L+ L  L + +N     P  I ++
Sbjct: 243 EIGQLASLTELFLHDNQFTSVPAEIGQL 270


>gi|354471549|ref|XP_003498004.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Cricetulus griseus]
          Length = 1036

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 115 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 174

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++  P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 175 NQLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 234

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 235 SLESLMLDNNGLQALPPEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 294

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 295 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 352

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 353 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 393



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 49  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 108

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 109 VLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 168

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L   PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 169 TLDVDHN--QLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 226

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 227 PSGFCELAS 235


>gi|344240334|gb|EGV96437.1| Malignant fibrous histiocytoma-amplified sequence 1-like
           [Cricetulus griseus]
          Length = 1025

 Score =  155 bits (392), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 114 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 173

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++  P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 174 NQLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 233

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 234 SLESLMLDNNGLQALPPEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 293

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 294 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 351

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 352 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 392



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 102/189 (53%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 48  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 107

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            L  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+S      L 
Sbjct: 108 VLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLR 167

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L   PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 168 TLDVDHN--QLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 225

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 226 PSGFCELAS 234


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/232 (37%), Positives = 138/232 (59%), Gaps = 2/232 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L E+++  +P  IG L +L +LDL  N++  LP  IG L +L   
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L EL LG N L+ LP  IG L +L++ +++ N    LP  I
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL + YN+L   P+ +GK+  L+ L++  N +  LP  +  L +L+ L++S N
Sbjct: 296 GQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 355

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L+++P+ +     L  +++ NN   L  LP+ IG L+ L+EL ++NNQ  +
Sbjct: 356 QLKTIPQEIGQLQNLKSLDLRNN--QLTILPKEIGQLKNLQELYLNNNQFSI 405



 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 158/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L L N   + +  LP  I +L +L  LDL  N++  +P  IG L +L++L
Sbjct: 110 EIGQLKNLKVLFLNN---NQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQEL 166

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L L  +Q++ LP  + +L  L ELDL  N L+ LP  I
Sbjct: 167 YLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEI 226

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++ +++ N L  LP  IG+  +L EL + +N+L  LP+ +G++  L+   +  N
Sbjct: 227 GQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNN 286

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
               LP  +  L +L+EL +S+N+L + P+ +     L  +N+ NN   L  LP  I  L
Sbjct: 287 QFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNN--QLTTLPEEIEQL 344

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L++S NQ++ +P     L  L+ L ++ N L + P+ I ++
Sbjct: 345 KNLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQL 390



 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 152/281 (54%), Gaps = 5/281 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L N   + +  LP  IG+L +L  L LS N++  +P  IG L +L+ L
Sbjct: 133 EIRQLKNLQMLDLGN---NQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ +++  LP  IG L +L  LDL  NQ++ LP  + +L  L+   L +N L+ LP  I
Sbjct: 190 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L +L +  N L  LP  IGQ  +L+   +D N+   LP+ +G++  L+ L + YN
Sbjct: 250 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L  L+ L++  N+L ++PE +     L  +N+  N   L+ +P+ IG L
Sbjct: 310 QLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQL 367

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           + L+ LD+ NNQ+ +LP     L  L+ L +  N   +  +
Sbjct: 368 QNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQFSIEEK 408



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L+ LP  IG L +L++L +  N L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  ++L  LP+ +GK+  L  L + +N +  LP  +  L +L+   +  N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L ++ +G+N   L  LP+ IG L+ L+   + NNQ  +LP     L
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHN--QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQL 298

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L   P+ I
Sbjct: 299 QNLQELYLSYNQLTTFPKEI 318



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  L L  NQ++ALP  + 
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L L +N L++LP  I  L +L+ L +  N L  LP  IGQ  +L+EL + YN+
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQ 172

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP+ +GK+  L++LS+  + +  LP  +  L +L ELD+S N+L  +P+ +     L
Sbjct: 173 LTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNL 232

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            +  + NN   L  LP+ IG L+ L EL + +NQ+ +LP     L  L+   +  N   +
Sbjct: 233 QRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 290

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 291 LPKEIGQL 298



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 26/300 (8%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  L L  N++ A+P  IG L +LK L L+ N++
Sbjct: 68  LQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQL 127

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  I  L +L  LDL  NQ++ LP  + +L  L+EL L  N L++LP  IG L +L+
Sbjct: 128 TTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQ 187

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  + L  LP  IG+  +L EL + +N+L  LP+ +G++  L+   +  N +  LP 
Sbjct: 188 LLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 247

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN--------------------- 310
            +  L +L EL +  N+L  +P+ +     L +  + NN                     
Sbjct: 248 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 307

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  L   P+ IG L+ L+ L++ NNQ+  LP+    L  L+ L + EN L+  P+ I ++
Sbjct: 308 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 367



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 122/215 (56%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L L   +++ LP  + +L  L+ LDLG N L++LP  IG L +L+ 
Sbjct: 37  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQL 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           LI+  N L  LP  IGQ  +L+ L ++ N+L  LP  + ++  L++L +  N +  LP  
Sbjct: 97  LILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL +S+N+L ++P+ +     L  +++    + L  LP+ IG L+ L ELD+
Sbjct: 157 IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYE--SQLTILPQEIGKLQNLHELDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S+NQ+ +LP     L  L+   +  N L + P+ I
Sbjct: 215 SHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS+N+++ +P  I  L +L+ LDL +N++I LP  I  L +L  L
Sbjct: 42  LPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQML 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ++ LP  + +L  L+EL L +N L++ P  IG L  L+ L +  N ++ +P  I
Sbjct: 102 DLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 161

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ +GK+  L+ L + YN IK LP  +  L  L+ L +  N
Sbjct: 162 EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKN 221

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  LP+ IG L+ L+ L ++NNQ+  +P     L
Sbjct: 222 QLTTLPQEIEKLQKLESLGLDNN--QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHL 279

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 280 QNLQDLYLVSNQLTTIPKEIGQL 302



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L L  N+I  LP  I  L 
Sbjct: 152 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQ 211

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 212 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 271

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+EL
Sbjct: 272 IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQEL 331

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 332 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 389

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 390 EIGQLQNLQTLYLRNNQFSIEEK 412



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++   P  IG L  L+ L+L AN+I  +P  I  L  L  L
Sbjct: 111 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L L  N + +LP  I  L  L+ L +  N L  LP  I
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L +D N+L  LP+ +G++  L+VL +  N +  +P  +  L +L++L +  N
Sbjct: 231 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++GNN   L  LP+ IG L+ L+EL +SNNQ+  +P     L
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGNN--QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 348

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 349 QNLQELYLSNNQLTTIPKEIGQL 371



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 142/262 (54%), Gaps = 2/262 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IGKL  L  L+LS N+I  +P  I  L  L+ L L  N++  LP  IG L  L +L 
Sbjct: 135 PKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLY 194

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQI  LP  + +L +L+ L L  N L++LP  I  L  L+ L ++ N L  LP  IG
Sbjct: 195 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 254

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+ L ++ N+L  +P+ +G +  L+ L +  N +  +P  +  L +L+ LD+  N+
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L  +P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P     L 
Sbjct: 315 LTILPKEIGKLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
            L+ L +  N L   P+ I ++
Sbjct: 373 NLQELYLSNNQLITIPKEIGQL 394



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 116/215 (53%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++ ALP  + +L  L+ LDL  N L  LP  I  L +L+ 
Sbjct: 18  DLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQM 77

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + +N L  LP  I Q  +L+ L +  N+L  LP+ +GK+  L+ L +  N +   P  
Sbjct: 78  LDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKE 137

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L  L+ L++S N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ L +
Sbjct: 138 IGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNN--QLTTLPQEIGKLQKLQWLYL 195

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S NQI+ LP     L +L+ L + +N L   P+ I
Sbjct: 196 SYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 230


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 152/257 (59%), Gaps = 3/257 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIG+L  L  L L  N++  +P +IG L  L  L+L  N +IELP+SI  L +L  L
Sbjct: 107 LPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP ++  L  L+ LD  SN L S+P+ IG L +LK L V+ N L  +P +I
Sbjct: 167 YLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+EL + +NRL  LP ++ ++ TL+ L + YN +  LP     L  L+++++S N
Sbjct: 227 GELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            + + P ++   T L  + + +N   L +LP ++GNLE LE L +++NQ+  LP S   L
Sbjct: 287 RITTFPIAITKLTQLKSLALDSN--QLTSLPANVGNLEQLEVLSLNDNQLIKLPKSIGKL 344

Query: 348 SRLRVLRVQENPL-EVP 363
           + L  L +  N L +VP
Sbjct: 345 TNLTTLSLINNKLTDVP 361



 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 152/265 (57%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP +I KL  L  L  + N +  +P +IG L  L +L L+ N + +LP+SIG+L 
Sbjct: 56  NKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELD 115

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ++ LP ++ +L  L  L+LG N+L  LP+SI  L +LK L +  N L  
Sbjct: 116 HLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAV 175

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   +L+ L    NRL+++PE +G++  L+ LSV  N++  +P ++  L  L+EL
Sbjct: 176 LPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKEL 235

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L  +P S+    TL  + +   +  L  LP   G L+ L+++++S+N+I   P 
Sbjct: 236 HLSHNRLTFLPASIAQLKTLKDLYLL--YNKLTGLPPGFGKLQHLKDINLSHNRITTFPI 293

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L++L+ L +  N L   P N+
Sbjct: 294 AITKLTQLKSLALDSNQLTSLPANV 318



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 150/253 (59%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIGKL  L  L+L  N ++ +P +I  L +LK L L+ N++  LP+SIG L +L YL
Sbjct: 130 LPESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D + N++ ++P  + +L  L+ L +  N+L+ +P+SIG L  LK+L +  N L  LP +I
Sbjct: 190 DAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L++L + YN+L  LP   GK+  L+ +++ +N I   P  ++ L+ L+ L +  N
Sbjct: 250 AQLKTLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P ++     L  +++ +N   L  LP+SIG L  L  L + NN++  +P   + L
Sbjct: 310 QLTSLPANVGNLEQLEVLSLNDN--QLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQNL 367

Query: 348 SRLRVLRVQENPL 360
             L  L ++ NP+
Sbjct: 368 PNLEYLVLEGNPI 380



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 139/256 (54%), Gaps = 3/256 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D++    ++  L++S  ++ ++P  I  L  L  L +  N+I  LP +I  L  L  L  
Sbjct: 17  DALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWF 76

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             N +  LP ++ +L +L EL L  N+L+ LP+SIG L  L+ L ++ N L  LP +IG+
Sbjct: 77  NHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGK 136

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
              L  L + +N L  LPE++ K+  L+ L +  N +  LP ++  L +L+ LD   N L
Sbjct: 137 LEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRL 196

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           +S+PE +     L  +++  N   L  +P SIG LE L+EL +S+N++  LP S   L  
Sbjct: 197 QSIPEEIGQLKNLKYLSVDGNH--LAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKT 254

Query: 350 LRVLRVQENPLE-VPP 364
           L+ L +  N L  +PP
Sbjct: 255 LKDLYLLYNKLTGLPP 270



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 129/231 (55%), Gaps = 25/231 (10%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           ++ KL++   ++  LP  I  L  L+ L + GN+I  LP  + +L +LEEL    N+L +
Sbjct: 24  AVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHT 83

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP+SIG L  L +L +  N L +LP +IG+   L +L +D+N+L  LPE++GK+  L +L
Sbjct: 84  LPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGIL 143

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++ +N++ +LP ++S L +L+ L ++ N+L  +PES                        
Sbjct: 144 NLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPES------------------------ 179

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG L+ L+ LD  +N+++ +P+    L  L+ L V  N L V P +I E+
Sbjct: 180 -IGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGEL 229



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/201 (34%), Positives = 112/201 (55%), Gaps = 5/201 (2%)

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           AL     + +L++ +  L+SLP  I  L  L  L V  N +E LP TI +   L EL  +
Sbjct: 18  ALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWFN 77

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           +N L  LPE++GK+  L  L + +N++ +LP ++  L  L +L +  N+L  +PES+   
Sbjct: 78  HNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKL 137

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  +N+G+N  DL  LP SI  L+ L+ L ++ N++ VLP+S  +L  L+ L  Q N 
Sbjct: 138 EHLGILNLGHN--DLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNR 195

Query: 360 LEVPPRNIVEMGAQAVVQYMA 380
           L+  P    E+G    ++Y++
Sbjct: 196 LQSIPE---EIGQLKNLKYLS 213



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 103/183 (56%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ +P+ IG+L +L  L +  N +  VP +IG L  LK+L L  NR+  LP SI  L +L
Sbjct: 196 LQSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTL 255

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++ LP    +L  L++++L  N +++ P +I  L  LK L +++N L  LP
Sbjct: 256 KDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTSLP 315

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G    L  L ++ N+L  LP+++GK+  L  LS+  N +  +P  + +L +L  L +
Sbjct: 316 ANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQNLPNLEYLVL 375

Query: 285 SFN 287
             N
Sbjct: 376 EGN 378



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/181 (31%), Positives = 93/181 (51%), Gaps = 5/181 (2%)

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           S+ D++ +  ++ KL +    L  LP  I +   L  L V  N+++ LP  + K+  LE 
Sbjct: 14  SMKDALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEE 73

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L   +N++  LP ++  L  L EL ++ N L  +PES+     L  + + +N   L  LP
Sbjct: 74  LWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHN--QLTVLP 131

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG LE L  L++ +N +  LP+S   L  L+ L + +N L V P +I   G    +QY
Sbjct: 132 ESIGKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESI---GLLQNLQY 188

Query: 379 M 379
           +
Sbjct: 189 L 189


>gi|403307215|ref|XP_003944101.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Saimiri boliviensis boliviensis]
          Length = 1052

 Score =  155 bits (391), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALHALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP    ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  +  L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALHALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 160/265 (60%), Gaps = 3/265 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  +P+++ KL++L  L+LS N+I  +P  +  L++L +L+L  N+I E+P+++ 
Sbjct: 133 LSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALA 192

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+LRGNQ + +P AL++L  L  L+L  N  + +P+++  L +L +LI+  N 
Sbjct: 193 KLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQ 252

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           ++E+P TI + ++L  L +  N++K +PE + K+  L  L +  N IK++P  ++ L++L
Sbjct: 253 IKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNL 312

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L +  N+++ +PE++   T L  + +  N   ++ +P +I  L  L +L +S+NQI  
Sbjct: 313 TQLGLDGNQIKEIPEAITKLTNLTHLILSGN--QIKEIPETIAKLTNLTQLALSSNQITE 370

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPP 364
           +P+    L+ L  L +  N +   P
Sbjct: 371 IPEVLAQLTNLTQLFLSSNQITQIP 395



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/265 (31%), Positives = 160/265 (60%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+++ KL++L  L+LS N+I  +P  +  L++L +L+L  N+  E+P+++  L 
Sbjct: 159 NQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLT 218

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ + +P AL++L  L +L L  N +  +P++I  L +L  LI+  N ++E
Sbjct: 219 NLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKE 278

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P TI + ++L +L +D N++K +PEA+ K+  L  L +  N IK++P  ++ L++L  L
Sbjct: 279 IPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHL 338

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+++ +PE++   T L ++ + +N   +  +P  +  L  L +L +S+NQI  +P+
Sbjct: 339 ILSGNQIKEIPETIAKLTNLTQLALSSN--QITEIPEVLAQLTNLTQLFLSSNQITQIPE 396

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L+ L  L ++ N +   P  I
Sbjct: 397 ALAPLTNLTTLHLRVNQITQIPEAI 421



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 77/266 (28%), Positives = 154/266 (57%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +PD + ++  L  L L   ++  +P  +  L++L +L L  N+I E+P+++  L +L
Sbjct: 92  LEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNL 151

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  NQI+ +P AL++L  L +L+L  N ++ +P+++  L +L +L +  N   E+P
Sbjct: 152 TQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIP 211

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             + + ++L  L + YN+   +PEA+ K+  L  L +  N IK++P T++ L++L  L +
Sbjct: 212 EALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLIL 271

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+++ +PE++   T L ++ +  N   ++ +P +I  L  L +L +  NQI+ +P++ 
Sbjct: 272 SGNQIKEIPETIAKLTNLTQLGLDGN--QIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAI 329

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L+ L  L +  N ++  P  I ++
Sbjct: 330 TKLTNLTHLILSGNQIKEIPETIAKL 355



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 168/310 (54%), Gaps = 23/310 (7%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE------------- 125
           +L  LIE ++ +G R+L+L  + +     LP  IGKL  L SL L +             
Sbjct: 5   ELLVLIEQAATEGWRELDLSGQELTE---LPGEIGKLQQLESLILGKQVGGYEKVGYRIF 61

Query: 126 -----NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
                N +  +P  +  L +L+KLD+  N +  +PD +  +L L  L L   Q++ +P A
Sbjct: 62  QKALGNNLKTLPIELLSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEA 121

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L++L  L +L L  N ++ +P+++  L +L +L +  N + E+P  + + ++L +L + Y
Sbjct: 122 LAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSY 181

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++  +PEA+ K+  L  L++R N   ++P  ++ L++L  L++S+N+   +PE+L   T
Sbjct: 182 NQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLT 241

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + +N   ++ +P +I  L  L  L +S NQI+ +P++   L+ L  L +  N +
Sbjct: 242 NLTQLILSDN--QIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQI 299

Query: 361 EVPPRNIVEM 370
           +  P  I ++
Sbjct: 300 KEIPEAIAKL 309



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 166/302 (54%), Gaps = 5/302 (1%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLN---LQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           GE   L +L SLI      G   +     Q  L +N++ LP  +  L +L  LD+S N +
Sbjct: 33  GEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIELLSLPNLRKLDISGNPL 92

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
             +P  +  +  L++L L   ++ E+P+++  L +L  L L  NQI+ +P AL++L  L 
Sbjct: 93  EGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLT 152

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           +L+L  N ++ +P+++  L +L +L +  N + E+P  + + ++L +L +  N+   +PE
Sbjct: 153 QLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPE 212

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           A+ K+  L  L++ YN   ++P  ++ L++L +L +S N+++ +PE++   T L  + + 
Sbjct: 213 ALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILS 272

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            N   ++ +P +I  L  L +L +  NQI+ +P++   L+ L  L +  N ++  P  I 
Sbjct: 273 GN--QIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAIT 330

Query: 369 EM 370
           ++
Sbjct: 331 KL 332



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 117/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I+ +P++I KL++L  L LS N+I  +P TI  L++L +L L  N+I E+P++I 
Sbjct: 248 LSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIA 307

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L GNQI  +P A+++L  L  L L  N +  +P++I  L +L +L + +N 
Sbjct: 308 KLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQ 367

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P  + Q ++L +L +  N++  +PEA+  +  L  L +R N I Q+P  + SL  L
Sbjct: 368 ITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPLTNLTTLHLRVNQITQIPEAIESLPKL 427

Query: 280 RELDVSFNELESVPESL 296
             LD+  N L   PE L
Sbjct: 428 ELLDLRGNPLPISPEIL 444



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 110/187 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P++I KL++L  L L  N+I  +P  I  L++L +L L  N+I E+P++I  L 
Sbjct: 274 NQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLT 333

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L +L L GNQI  +P  +++L  L +L L SN ++ +P+ +  L +L +L + +N + +
Sbjct: 334 NLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQ 393

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +   ++L  L +  N++  +PEA+  +  LE+L +R N +   P  + S+  +  +
Sbjct: 394 IPEALAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISPEILGSVYQVGSV 453

Query: 283 DVSFNEL 289
           +  FN L
Sbjct: 454 EEIFNYL 460



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 92/165 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P++I KL++L  L L  N+I  +P  I  L++L  L L  N+I E+P++I  L 
Sbjct: 297 NQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIAKLT 356

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQI+ +P  L++L  L +L L SN ++ +P+++  L +L  L +  N + +
Sbjct: 357 NLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPLTNLTTLHLRVNQITQ 416

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
           +P  I     L  L +  N L   PE +G ++ +  +   +N ++
Sbjct: 417 IPEAIESLPKLELLDLRGNPLPISPEILGSVYQVGSVEEIFNYLR 461


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 158/283 (55%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L+L +NR+  +P  IG L +L+ L
Sbjct: 135 EIGQLRNLQTLNLQD---NQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L L  NQ++  P  + +L  L+ELDL +N L++LP  I
Sbjct: 192 NLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTALPKEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L   P  IGQ   L++L + YNRL  LP+ +G++  L+ L + YN
Sbjct: 252 GQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+ +N+ ++V + +     L+++N+  ++  L  LP  IG L
Sbjct: 312 RLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNL--SYNQLATLPAEIGQL 369

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + L  LD+  NQ+  LP     L  L  L +  N L   P+ I
Sbjct: 370 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEI 412



 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 157/269 (58%), Gaps = 5/269 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L +   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLGD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++I  P  IG L +L  L+L+ NQ++ LPV + +L  LE+L+L  N L+ LP  I
Sbjct: 123 GLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+ L +  N+L   P+ +G++  L+ L +  N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L  L++S N+L + P+ +     L   ++G ++  L  LP+ IG L
Sbjct: 243 RLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKL--QDLGLSYNRLVILPKEIGQL 300

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E L++L +S N++ +LP     L  L++L
Sbjct: 301 EKLQDLGLSYNRLVILPKEIGQLKNLQML 329



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 146/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  LDL +N++   PA I  L  L+ LDL  NR++ LP+ IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQ 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++   P  + +L  L+ L+L  N L++LP  IG L +L+KL +  N L  
Sbjct: 118 NLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTV 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +  N +   P  +  L +L+EL
Sbjct: 178 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N L ++P+ +     L  + +  N   L   P+ IG L+ L++L +S N++ +LP 
Sbjct: 238 DLWNNRLTALPKEIGQLKNLENLELSEN--QLTTFPKEIGQLKKLQDLGLSYNRLVILPK 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L +L+ L +  N L + P+ I ++
Sbjct: 296 EIGQLEKLQDLGLSYNRLVILPKEIGQL 323



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 119/227 (52%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  LDL  NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L+ L +  N+L  LP  +G++  LE L++R 
Sbjct: 113 IGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRK 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++P  +     L  + +  N   L   P+ IG 
Sbjct: 173 NRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSEN--QLTTFPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LE L+ELD+ NN++  LP     L  L  L + EN L   P+ I ++
Sbjct: 231 LENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 277


>gi|74152736|dbj|BAE42636.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 162/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  +  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS   L  L  LD+  
Sbjct: 55  VSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDH 114

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 115 NQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELA 174

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP+   ++  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 175 SLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 234

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LS + 
Sbjct: 235 VPSLIAGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSPVG 292

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 293 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 333



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 123/259 (47%), Gaps = 30/259 (11%)

Query: 153 ELPDSIGDLL-SLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLISL 210
           ++P+ +G  L SL  L LR N+ + LP A++ L   L ELD+  N L+ L   + S +  
Sbjct: 1   DVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSALR- 59

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
                                 +R+L + +N+L ALP  +G +  LE L V +N +  LP
Sbjct: 60  ---------------------EMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLP 98

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            + S L+ LR LDV  N+L + P+ L     L ++++ +N   LR LP  I  L  L+ L
Sbjct: 99  DSFSCLNHLRTLDVDHNQLTAFPQQLLQLAALEELDVSSN--RLRGLPEDISALRALKIL 156

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            +S  ++  LP  F  L+ L  L +  N L+  P     +    ++   ++L E+  A  
Sbjct: 157 WLSGAELGTLPRGFCELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSNLFEEFPAAL 216

Query: 391 QPVKQKKSWVEMCFFSRSN 409
            P+    + +E  + SR+ 
Sbjct: 217 LPL----AGLEELYLSRNQ 231


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  155 bits (391), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L+++  LDLS  ++  +P  +  L+ L+ LDL +N +  LP  +G L ++ +L
Sbjct: 84  LPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL   Q+  LP  + RL +LE LDL SN L +LP  +G L +L+KL + +N L+ LP  +
Sbjct: 144 DLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEV 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G C++++ L + + +L+ LP  V K+  LE L +R N ++ LPT +  L++++ L++S  
Sbjct: 204 GHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDC 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P  +   T L K+++ +N   L+ LP  +G+   ++ LD+S+ Q+R LP     L
Sbjct: 264 QLHILPPEVGRLTQLEKLDLCSN--PLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKL 321

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           ++L  L +  NPL+  P  + ++
Sbjct: 322 TQLEWLSLSSNPLQTLPAEVGQL 344



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/295 (31%), Positives = 162/295 (54%), Gaps = 28/295 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L+ L  LDLS N +  +PA +G L++L+KLDL +N +  LP  +G   ++ +L
Sbjct: 153 LPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHL 212

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK---------------- 211
           DL   Q+  LP  + +L +LE LDL SN L +LP  +G L ++K                
Sbjct: 213 DLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHLTNVKYLNLSDCQLHILPPEV 272

Query: 212 -------KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                  KL + +N L+ LP  +G C++++ L + + +L+ LP  V K+  LE LS+  N
Sbjct: 273 GRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++ LP  +  L+++++L++S  +L ++P  +   T L ++++ +N   L+ LP  +G L
Sbjct: 333 PLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSN--PLQTLPAEVGQL 390

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             ++ LD+S   +  LP     L++L  L ++ NPL   P    E+G    V+++
Sbjct: 391 TNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALP---AEVGQLTNVKHL 442



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +GKL+ L  LDLS N +  +PA +G L+++K L+L   ++  LP  +G L  L +L
Sbjct: 15  LPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQLEWL 74

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N +  LP  + +L  ++ LDL    L +LP  +  L  L+ L + +N L+ LP  +
Sbjct: 75  DLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEV 134

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++++ L +   +L+ LP  VG++  LE L +  N ++ LP  +  L++L +LD+  N
Sbjct: 135 GQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSN 194

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+++P  +   T +  +++ +    LR LP  +  L  LE LD+ +N ++ LP     L
Sbjct: 195 PLQTLPAEVGHCTNVKHLDLSH--CQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHL 252

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + ++ L + +  L + P  +
Sbjct: 253 TNVKYLNLSDCQLHILPPEV 272



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 155/272 (56%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L+++  L+LS  ++  +P  +G L+ L+ LDL +N +  LP  +G L ++ +L
Sbjct: 38  LPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHL 97

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL   Q+  LP+ + +L +LE LDL SN L +LP  +G L ++K L +    L  LP  +
Sbjct: 98  DLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEV 157

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ + L  L +  N L+ LP  VG +  LE L +  N ++ LP  +   ++++ LD+S  
Sbjct: 158 GRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHC 217

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +   T L  +++ +N   L+ LP  +G+L  ++ L++S+ Q+ +LP     L
Sbjct: 218 QLRTLPFEVWKLTQLEWLDLRSN--PLQTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRL 275

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++L  L +  NPL+  P    E+G    V+++
Sbjct: 276 TQLEKLDLCSNPLQTLP---AEVGHCTNVKHL 304



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 147/260 (56%), Gaps = 5/260 (1%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            LDLS+ ++  +P  +G L+ L+ LDL +N +  LP  +G L ++ +L+L   Q+  LP 
Sbjct: 4   HLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPP 63

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + RL +LE LDL SN L +LP  +G L ++K L +    L  LP  + + + L  L + 
Sbjct: 64  EVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLS 123

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N L+ LP  VG++  ++ L +    ++ LP+ +  L+ L  LD+S N L+++P  +   
Sbjct: 124 SNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHL 183

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           T L K+++ +N   L+ LP  +G+   ++ LD+S+ Q+R LP     L++L  L ++ NP
Sbjct: 184 TNLEKLDLCSN--PLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNP 241

Query: 360 LEVPPRNIVEMGAQAVVQYM 379
           L+  P    E+G    V+Y+
Sbjct: 242 LQTLP---TEVGHLTNVKYL 258



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 60/186 (32%), Positives = 106/186 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L+ L  LDL  N +  +PA +G  +++K LDL   ++  LP  +  L  L +L
Sbjct: 268 LPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWL 327

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  LP  + +L  +++L+L    L +LP  +G L  L++L + +N L+ LP  +
Sbjct: 328 SLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEV 387

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++++ L +    L  LP  VG++  LE L +R N +  LP  +  L++++ LD+S  
Sbjct: 388 GQLTNVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHLDLSHC 447

Query: 288 ELESVP 293
           +L ++P
Sbjct: 448 QLHTLP 453



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 25/243 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L+++  L+LS+ ++  +P  +G L+ L+KLDL +N +  LP  +G   ++ +L
Sbjct: 245 LPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHL 304

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL   Q+  LP  + +L +LE L L SN L +LP  +G L ++K+L             +
Sbjct: 305 DLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVKQL------------NL 352

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
             C           +L  LP  VGK+  LE L +  N ++ LP  +  L++++ LD+S  
Sbjct: 353 SDC-----------QLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQC 401

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  +   T L  +++ +N   L ALP  +G L  ++ LD+S+ Q+  LP     L
Sbjct: 402 LLHTLPPEVGRLTQLEWLDLRSN--PLHALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRL 459

Query: 348 SRL 350
           ++L
Sbjct: 460 TQL 462


>gi|156717734|ref|NP_001096407.1| malignant fibrous histiocytoma-amplified sequence 1 homolog
           [Xenopus (Silurana) tropicalis]
 gi|160012388|sp|A4IIK1.1|MFHA1_XENTR RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1
           homolog
 gi|134026210|gb|AAI36051.1| LOC100125009 protein [Xenopus (Silurana) tropicalis]
          Length = 997

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/266 (36%), Positives = 145/266 (54%), Gaps = 3/266 (1%)

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           S N++  +P  +G L  L++LD+  N+I  LPD++  L SL  LDL  N++ + P  L  
Sbjct: 132 SHNQLRTLPRQLGMLVDLEELDVSFNQITHLPDTMQGLPSLRTLDLDHNELCSFPQQLFH 191

Query: 184 LVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +  LEELD   N  L SLP+ I S+ SLK L + +  L  LP +I +  +L  L +D N 
Sbjct: 192 VPALEELDFSGNKMLGSLPEGIRSMQSLKILWLSSTSLCLLPDSICELVNLESLMLDNNN 251

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LPE  G +  L++L+V  N  +  P  +  L  L EL +S N L  +PE +   T L
Sbjct: 252 LHTLPEGFGALQKLKMLNVSSNAFQDFPVPLLQLVDLEELYMSRNRLVVLPEVISCMTKL 311

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           V + + NN   +R LP SI  L  LEEL +  NQI +LPD F  LS++ + ++++NPL  
Sbjct: 312 VTLWLDNN--RIRYLPDSIVELSFLEELVLQGNQIAILPDDFGKLSKVNIWKIKDNPLIQ 369

Query: 363 PPRNIVEMGAQAVVQYMADLVEKRDA 388
           PP  +   G   +  Y  +L   + A
Sbjct: 370 PPYEVCMKGISYIAAYQKELAHSQPA 395



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 138/260 (53%), Gaps = 10/260 (3%)

Query: 116 SSLVSLDLS--ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS--LVYLDLRG 171
           SSL  L LS  + R + +PA +G    ++ L+L  N + E+PD +  L +  L  L LR 
Sbjct: 31  SSLRQLTLSCVDKRKLILPADLG---DVEVLNLGNNSLEEVPDGLQSLSAGNLHVLILRR 87

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N+   +P A+  L RL ELD+  N LS L +++G L  LKKL +  N L  LP  +G   
Sbjct: 88  NKFLNVPTAVYHLGRLTELDISYNRLSCLTEAVGLLGKLKKLCLSHNQLRTLPRQLGMLV 147

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE-LE 290
            L EL V +N++  LP+ +  + +L  L + +N +   P  +  + +L ELD S N+ L 
Sbjct: 148 DLEELDVSFNQITHLPDTMQGLPSLRTLDLDHNELCSFPQQLFHVPALEELDFSGNKMLG 207

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           S+PE +    +L  + + +    L  LP SI  L  LE L + NN +  LP+ F  L +L
Sbjct: 208 SLPEGIRSMQSLKILWLSS--TSLCLLPDSICELVNLESLMLDNNNLHTLPEGFGALQKL 265

Query: 351 RVLRVQENPLEVPPRNIVEM 370
           ++L V  N  +  P  ++++
Sbjct: 266 KMLNVSSNAFQDFPVPLLQL 285



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 54/163 (33%), Positives = 84/163 (51%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I  + SL  L LS   +  +P +I  L +L+ L L  N +  LP+  G L  L  L
Sbjct: 209 LPEGIRSMQSLKILWLSSTSLCLLPDSICELVNLESLMLDNNNLHTLPEGFGALQKLKML 268

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  N     PV L +LV LEEL +  N L  LP+ I  +  L  L ++ N +  LP +I
Sbjct: 269 NVSSNAFQDFPVPLLQLVDLEELYMSRNRLVVLPEVISCMTKLVTLWLDNNRIRYLPDSI 328

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
            + S L EL +  N++  LP+  GK+  + +  ++ N + Q P
Sbjct: 329 VELSFLEELVLQGNQIAILPDDFGKLSKVNIWKIKDNPLIQPP 371


>gi|431902291|gb|ELK08792.1| Malignant fibrous histiocytoma-amplified sequence 1 [Pteropus
           alecto]
          Length = 738

 Score =  154 bits (390), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 163/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ ++PA +G L+ L++LD+  NR++ LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLVHLPDSLSCLYRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPDGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 105/189 (55%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAWLPPAVAKLGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 125 ALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLVHLPDSLSCLYRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PDGFCELAS 251


>gi|224090495|ref|XP_002309000.1| predicted protein [Populus trichocarpa]
 gi|222854976|gb|EEE92523.1| predicted protein [Populus trichocarpa]
          Length = 336

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/262 (40%), Positives = 149/262 (56%), Gaps = 6/262 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP    +L ++  L L  N +  +P +L+ R++ L  LD+ SN L S
Sbjct: 22  LEVVDLSGMSLETLPHPSLNLATICKLYLSNNDLQMIPESLTARMLNLVVLDVHSNQLKS 81

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N +E LP TI  C  L EL  ++N+L  LP+ +G ++  L+ 
Sbjct: 82  LPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLEELNANFNKLSRLPDTIGFELVNLKK 141

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP + S L+SL+ LD   N L S+PE L     L  +N+  NF  L ALP
Sbjct: 142 LSVNSNKLVFLPMSTSHLTSLKILDARLNNLRSLPEDLENLINLEVLNVSQNFQYLEALP 201

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            +IG L  L ELD+S N+I  LPDS   L +L+ L V+ NPL  PP  +VE G   V +Y
Sbjct: 202 YAIGVLISLVELDVSYNKITTLPDSMGCLRKLQKLYVEGNPLISPPMEVVERGLHVVKEY 261

Query: 379 MADLVEKRDAKTQPVKQKKSWV 400
           ++   EK +A  +    KKSWV
Sbjct: 262 LS---EKMNAGHKS-PTKKSWV 279



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 103/165 (62%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + ++ LP+SIG LS L  L++S N I ++P TI     L++L+ + N++  LPD+IG +L
Sbjct: 77  NQLKSLPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLEELNANFNKLSRLPDTIGFEL 136

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           ++L  L +  N++  LP++ S L  L+ LD   NNL SLP+ + +LI+L+ L V  N   
Sbjct: 137 VNLKKLSVNSNKLVFLPMSTSHLTSLKILDARLNNLRSLPEDLENLINLEVLNVSQNFQY 196

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           LE LP+ IG   SL EL V YN++  LP+++G +  L+ L V  N
Sbjct: 197 LEALPYAIGVLISLVELDVSYNKITTLPDSMGCLRKLQKLYVEGN 241



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 49/80 (61%), Gaps = 2/80 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           ++N+  LP+ +  L +L  L++S+N   + A+P  IG L SL +LD+  N+I  LPDS+G
Sbjct: 169 LNNLRSLPEDLENLINLEVLNVSQNFQYLEALPYAIGVLISLVELDVSYNKITTLPDSMG 228

Query: 160 DLLSLVYLDLRGNQISALPV 179
            L  L  L + GN + + P+
Sbjct: 229 CLRKLQKLYVEGNPLISPPM 248



 Score = 43.9 bits (102), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 8/132 (6%)

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
           +++ +R KA+ E       LEV+ +   +++ LP    +L+++ +L +S N+L+ +PESL
Sbjct: 8   KINGDRRKAIEEE-----RLEVVDLSGMSLETLPHPSLNLATICKLYLSNNDLQMIPESL 62

Query: 297 CFAT-TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                 LV +++ +N   L++LP SIG L  L+ L++S N I  LP +      L  L  
Sbjct: 63  TARMLNLVVLDVHSN--QLKSLPNSIGCLSKLKVLNVSGNLIESLPRTIENCRCLEELNA 120

Query: 356 QENPLEVPPRNI 367
             N L   P  I
Sbjct: 121 NFNKLSRLPDTI 132


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 151/253 (59%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +G+L +L  L+L  N++  +P  IG L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQIL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           + +GNQ++  P  + +L +L+EL+LG N L++L + +  L +L+ L + +N L  LP  I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L++L +  N+L  LPE +G++  L+ L +  N ++ LP  +  L  L+ L +  N
Sbjct: 252 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L ++N+G  F  L  LP+ IG L+ L+EL++  NQ+  LP     L
Sbjct: 312 QITTFPKEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQL 369

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 370 QKLRKLNLYNNPI 382



 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 147/250 (58%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS +++  +   IG L +L+KL L+ N++  LP+ IG L +L  LDL  N+++ LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L+LG N L+ LPD +G L +L+ L ++ N L  LP  IGQ  +L+ L +D 
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LPE +G++  L++L+ + N +   P  +  L  L+EL++ FN L ++ E +    
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ +N   L  LP+ IG L  L++L +  NQ+  LP+    L +L+ L +  NPL
Sbjct: 233 NLQILDLISN--PLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 290

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 291 RTLPKEIEQL 300



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 149/268 (55%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ IG+L +L  LDL  N +  +P  IG L +L+ L+L  NR+  LPD +G L 
Sbjct: 81  NQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQ 140

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  N+++ LP  + +L  L+ L+L  N L+ LP+ IG L +L+ L  + N L  
Sbjct: 141 NLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTT 200

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  IGQ   L+EL + +NRL  L E V ++  L++L +  N +  LP  +  LS L++L
Sbjct: 201 FPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKL 260

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++PE +     L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P 
Sbjct: 261 YLYGNQLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPK 318

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L   P+ I ++
Sbjct: 319 EIGQLQNLQELNLGFNQLTTLPQEIGQL 346



 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 166/311 (53%), Gaps = 5/311 (1%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L+ L+L  N L+ LP+ IG L +L+ L ++ N L  LP  IGQ  +L+ L   
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQ 194

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L   P+ +G++  L+ L++ +N +  L   +  L +L+ LD+  N L ++P+ +   
Sbjct: 195 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQL 254

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L K+ +  N   L  LP  IG L+ L+EL + NN +R LP     L +L+ L ++ N 
Sbjct: 255 SKLQKLYLYGN--QLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQ 312

Query: 360 LEVPPRNIVEM 370
           +   P+ I ++
Sbjct: 313 ITTFPKEIGQL 323



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 123/209 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP+ IG+L +L  L+   N++   P  IG L  L++L+L  NR+  L + +  L
Sbjct: 172 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQL 231

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  N ++ LP  + +L +L++L L  N L++LP+ IG L  L++L +  N L 
Sbjct: 232 QNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLR 291

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  I Q   L+ L ++ N++   P+ +G++  L+ L++ +N +  LP  +  L +L+E
Sbjct: 292 TLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQE 351

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN 310
           L++ FN+L ++P+ +     L K+N+ NN
Sbjct: 352 LNLEFNQLATLPKEVGQLQKLRKLNLYNN 380



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +   P  IG+L  L  L+L  NR+  +   +  L +L+ LDL +N + 
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L L GNQ++ LP  + +L +L+EL LG+N L +LP  I  L  L+ 
Sbjct: 246 TLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQT 305

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +E N +   P  IGQ  +L+EL + +N+L  LP+ +G++  L+ L++ +N +  LP  
Sbjct: 306 LYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKE 365

Query: 273 MSSLSSLRELDVSFNELES 291
           +  L  LR+L++  N + S
Sbjct: 366 VGQLQKLRKLNLYNNPIAS 384


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 153/258 (59%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  I +L +L  L L +N++  +P  IG L +L++L L  N+++ LP+ IG L 
Sbjct: 125 NQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLK 184

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQI  +P  + +L +L+ L LG+N L++LP+ IG L  L++L + TN L  
Sbjct: 185 NLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTT 244

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ  +L++L +  N+L  LP  +G++  L+ L +R N +  L   +  L +L+ L
Sbjct: 245 LPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSL 304

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L + P+ +     L  +++G+N   L  LP+ IG L+ L+  +++NNQ+  LP 
Sbjct: 305 DLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPKEIGQLKNLQVFELNNNQLTTLPK 362

Query: 343 SFRMLSRLRVLRVQENPL 360
               L  L+ L + +N L
Sbjct: 363 EIGQLQNLQELYLIDNQL 380



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L+L  N++  LP+ I  L +L  L
Sbjct: 61  LPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQLKTLPEEIEQLKNLQRL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+EL L  N L++LP  IG L +L++L +  N L  LP  I
Sbjct: 121 YLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLMTLPEEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN++K +P+ + K+  L+ L +  N +  LP  +  L  L+EL +S N
Sbjct: 181 GQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  +     L  + +G+N   L  LP  IG L+ L+ L + +N++  L      L
Sbjct: 241 RLTTLPNEIGQLQNLQDLYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQL 298

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 299 QNLKSLDLWNNQLTTFPKEIEQL 321



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+ I +L +L  L LS N++  +P  I  L +L++L L  N++  LP  IG L 
Sbjct: 102 NQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLK 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ+  LP  + +L  L+ L+L  N + ++P  I  L  L+ L +  N L  
Sbjct: 162 NLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTA 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IGQ   L+EL +  NRL  LP  +G++  L+ L +  N +  LP  +  L +L+ L
Sbjct: 222 LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTL 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++ + +     L  +++ NN   L   P+ I  L+ L+ LD+ +NQ+  LP 
Sbjct: 282 YLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQLKNLQVLDLGSNQLTTLPK 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+V  +  N L   P+ I ++
Sbjct: 340 EIGQLKNLQVFELNNNQLTTLPKEIGQL 367



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/242 (30%), Positives = 127/242 (52%), Gaps = 25/242 (10%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L ++I + L +  LDL   ++  LP  + RL  L+EL L  N L +LP  IG L +L+
Sbjct: 36  MDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLR 95

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L+ LP  I Q  +L+ L + YN+LK LP+ + ++  L+ L +R N +  LPT
Sbjct: 96  VLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPT 155

Query: 272 TMSSLSSLRE-----------------------LDVSFNELESVPESLCFATTLVKMNIG 308
            +  L +L+                        L++S+N+++++P+ +     L  + +G
Sbjct: 156 EIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLG 215

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NN   L ALP  IG L+ L+EL +S N++  LP+    L  L+ L +  N L + P  I 
Sbjct: 216 NN--QLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 273

Query: 369 EM 370
           ++
Sbjct: 274 QL 275



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 105/189 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++ A+P  IG L  L++L L  NR+  LP+ IG L 
Sbjct: 194 NQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQ 253

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  
Sbjct: 254 NLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTT 313

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  I Q  +L+ L +  N+L  LP+ +G++  L+V  +  N +  LP  +  L +L+EL
Sbjct: 314 FPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQEL 373

Query: 283 DVSFNELES 291
            +  N+L S
Sbjct: 374 YLIDNQLSS 382


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/285 (37%), Positives = 163/285 (57%), Gaps = 27/285 (9%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LP+SIG+L+ L  L L +N++  +P +IG L+ L +L LH N++  LP+SI  L  
Sbjct: 29  NLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQ 88

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  NQ++ LP ++S+L +L ELDL +N L+ LP+SIG L  L +L + TN L  L
Sbjct: 89  LTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVL 148

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P +IGQ + L  L +  N+L  LPE++G+                       L+ L ELD
Sbjct: 149 PESIGQLTQLTRLDLSNNQLTDLPESIGQ-----------------------LTQLTELD 185

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +  N+L  +PES+   T L ++++ NN  +L  LP SIG L  L EL +  N++ VLP S
Sbjct: 186 LPNNQLTDLPESIGQLTQLTELDLRNN--ELTTLPESIGQLTQLRELSLHTNELTVLPKS 243

Query: 344 FRMLSRLRVLRVQENP-LEVPPRNIVE-MGAQAVVQYMADLVEKR 386
            + L+ LR+L ++ N  L +PP  I +   +  ++ Y   L+E R
Sbjct: 244 LQHLTLLRLLDLRGNTDLGIPPEVIEDRFDSDRILDYYFRLLEDR 288


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L L +N++  +P  IG L +LK L+L  N+I  +P  I  L  L  L
Sbjct: 9   LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 68

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDL +N L++LP  IG L +L+ L + TN L  LP  I
Sbjct: 69  GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 128

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L+EL +  N+L  LP  +G++  L+ L++R N +  L   +  L +L+ LD+  N
Sbjct: 129 GHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L   P+ +     L  +++G+N   L  LP  IG L+ L+ LD+ +NQ+  LP   + L
Sbjct: 189 QLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQL 246

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L++L +  N L+  P+ I ++
Sbjct: 247 KNLQLLDLSYNQLKTLPKEIEQL 269



 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SL+LS N+I  +P  I  L  L+ L L  N++  LP  IG L +L  L
Sbjct: 32  LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ LDL +N L++LP  IG L +L++L + +N L  LP+ I
Sbjct: 92  DLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  NRL  L + + ++  L+ L +R N +   P  +  L +L+ LD+  N
Sbjct: 152 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN 211

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +++ +N   L  LP+ I  L+ L+ LD+S NQ++ LP     L
Sbjct: 212 QLTTLPEGIGQLKNLQTLDLDSN--QLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQL 269

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L V P+ I ++
Sbjct: 270 KNLQTLYLGYNQLTVLPKEIGQL 292



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/269 (34%), Positives = 146/269 (54%), Gaps = 5/269 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 35  EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 91

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  LDL  N+++ LP  +  L  L+EL L SN L+ LP+ I
Sbjct: 92  DLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILPNEI 151

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  L   I Q  +L+ L +  N+L   P+ +G++  L+VL +  N
Sbjct: 152 GQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN 211

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+  N+L ++P+ +     L  +++   +  L+ LP+ I  L
Sbjct: 212 QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLS--YNQLKTLPKEIEQL 269

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + L+ L +  NQ+ VLP     L  L+VL
Sbjct: 270 KNLQTLYLGYNQLTVLPKEIGQLQNLKVL 298


>gi|426358776|ref|XP_004046670.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Gorilla gorilla gorilla]
          Length = 1035

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 107/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 114 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 173

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 174 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 233

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 234 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 293

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 294 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 351

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 352 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 392



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 48  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 107

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 108 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 167

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 168 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 225

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 226 PAGFCELAS 234


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 141/244 (57%), Gaps = 2/244 (0%)

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           VPA +G LS+L+KL LH N +  LP  IG L SL  L L GNQ++++P  + +L  L EL
Sbjct: 20  VPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALREL 79

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
            L +N L S+P  IG L SL++L + +N L  +P  IGQ +SL  LR+  NRL ++PE +
Sbjct: 80  SLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEI 139

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G++ +L VL +  N    +P  +  L++LREL +  N L SVP  +   T+L ++++  N
Sbjct: 140 GQLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGN 199

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              L ++P  IG L +L+ L++  NQ+  LP     L+ L  L +  N L   P  I E+
Sbjct: 200 --QLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIREL 257

Query: 371 GAQA 374
            A  
Sbjct: 258 RAAG 261



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 43/306 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SL  L L  N++ +VPA IG L++L++L L ANR++ +P  IG L SL  L
Sbjct: 43  LPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQLTSLREL 102

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ +P  + +L  LE L L  N L+S+P+ IG L SL  L++  N    +P  I
Sbjct: 103 NLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEI 162

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++LRELR+D NRL ++P  +G++ +L  LS+  N +  +P  +  L+ L+ L++ +N
Sbjct: 163 GQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYN 222

Query: 288 ELESVPESLCFATTLVKMNIGNN------------------------------------- 310
           +L S+P  +   T+L  + + NN                                     
Sbjct: 223 QLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTMENGRVV 282

Query: 311 ------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
                 F  + ALP  +G L  L  L +  N +  +P     L+ L    + +N L   P
Sbjct: 283 KLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVP 342

Query: 365 RNIVEM 370
             I ++
Sbjct: 343 AEIGQL 348



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 135/240 (56%), Gaps = 2/240 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L  L L  N + ++PA IG L+SL+ L L  N++  +P  IG L +L  L
Sbjct: 20  VPAELGRLSALRKLSLHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALREL 79

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++ ++P  + +L  L EL+L SN L+++P  IG L SL+ L +  N L  +P  I
Sbjct: 80  SLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEI 139

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N+  ++P  +G++  L  L +  N +  +P  +  L+SL EL +S N
Sbjct: 140 GQLTSLVVLVLGGNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGN 199

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T L  + +   +  L +LP  IG L  LE L + NNQ+  +P   R L
Sbjct: 200 QLTSVPAEIGQLTLLKGLEL--YYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIREL 257



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/352 (30%), Positives = 162/352 (46%), Gaps = 69/352 (19%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      R+L L    + ++   P  IG+L+SL  L LS N++ +VPA IG L+ LK L
Sbjct: 161 EIGQLTALRELRLDGNRLTSV---PAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGL 217

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ------------------------------- 173
           +L+ N++  LP  IG L SL +L L  NQ                               
Sbjct: 218 ELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIRELRAAGCRVDLDDGHWEGVTME 277

Query: 174 --------------ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
                         I ALP  + RL  L  L LG NNL+S+P  IG L SL    +  N 
Sbjct: 278 NGRVVKLDLVEFGLIGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNK 337

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  +P  IGQ +SL  L +D+NRL ++P  +G++ +L  L +  N +  +P  +  L+SL
Sbjct: 338 LTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSL 397

Query: 280 RELDVSFNELESVPESL------------CFATTLVKMNIGNNFA---------DLRALP 318
           + L +S N+L SVP ++            C  T L+   IG   A         +L ++P
Sbjct: 398 KGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVP 457

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             IG L  LE L++S N++  +P     L+ L  L +  N L   P  I ++
Sbjct: 458 AEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEIGQL 509



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/272 (34%), Positives = 143/272 (52%), Gaps = 14/272 (5%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP  +G+LS+L  L L  N + +VPA IG L+SL    L  N++  +P  IG L SL
Sbjct: 292 IGALPAEVGRLSALRWLQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSL 351

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N+++++P  + RL  L  L L SN L+S+P  IG L SLK L +  N L  +P
Sbjct: 352 EVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVP 411

Query: 225 HTIGQCSSLRELRVDYNRLKA------LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             I      R+LR    RL+       LP  +G +  L +L +  N +  +P  +  L+S
Sbjct: 412 AAI------RDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTS 465

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  L++S N+L SVP  +   T+L ++ + +N   L +LP  IG L  L+ L + +NQ+ 
Sbjct: 466 LEVLELSRNKLTSVPVEIGQLTSLERLYLSSN--RLTSLPAEIGQLTSLKRLYLDHNQLT 523

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P     L+ L+   +Q N L   P  I ++
Sbjct: 524 SVPAEIGQLAALQWFDLQRNELTSVPAEIGQL 555



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 143/250 (57%), Gaps = 2/250 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  +P  IG+L+SL++  LS+N++ +VPA IG L+SL+ L L  NR+  +P  IG L 
Sbjct: 313 NNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLT 372

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N+++++P  + +L  L+ L L  N L+S+P +I  L +    + + +    
Sbjct: 373 SLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGL 432

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG   +LR L++  N L ++P  +G++ +LEVL +  N +  +P  +  L+SL  L
Sbjct: 433 LPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERL 492

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L S+P  +   T+L ++ + +N   L ++P  IG L  L+  D+  N++  +P 
Sbjct: 493 YLSSNRLTSLPAEIGQLTSLKRLYLDHN--QLTSVPAEIGQLAALQWFDLQRNELTSVPA 550

Query: 343 SFRMLSRLRV 352
               L R R+
Sbjct: 551 EIGQLLRGRL 560



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 119/217 (54%), Gaps = 24/217 (11%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  +P  IG+L+SL  L L  NR+ ++PA IG L+SL  L L +NR+  +P  IG
Sbjct: 333 LSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIGRLTSLTTLFLSSNRLTSVPAEIG 392

Query: 160 DLLSLVYLDLRGNQISALPVALSRL----VRLEELDL-------------------GSNN 196
            L SL  L L  NQ++++P A+  L     RLE+ DL                     N 
Sbjct: 393 QLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDCDLTGLLPAEIGCLGALRLLQLAGNE 452

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+S+P  IG L SL+ L +  N L  +P  IGQ +SL  L +  NRL +LP  +G++ +L
Sbjct: 453 LTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLTSLERLYLSSNRLTSLPAEIGQLTSL 512

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           + L + +N +  +P  +  L++L+  D+  NEL SVP
Sbjct: 513 KRLYLDHNQLTSVPAEIGQLAALQWFDLQRNELTSVP 549


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  154 bits (390), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  IG L +L++L L  N++  LP  IG L +L  L
Sbjct: 130 LPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  +Q++ LP  + +L  L ELDL  N L+ LP  IG L +L++ +++ N L  LP  I
Sbjct: 190 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N    LP  +  L +L+EL +S+N
Sbjct: 250 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +N+ NN   L  LP  I  L+ L+ L++S NQ++ +P     L
Sbjct: 310 QLTTFPKEIGKLQKLQTLNLWNN--QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 367

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L++L +  N L   P+ I ++
Sbjct: 368 QNLKLLDLSNNQLTTLPKEIEQL 390



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L L+ +++  LP  IG L +L  L
Sbjct: 153 LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHEL 212

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+   L +N L+ LP  IG L +L +L +  N L  LP  I
Sbjct: 213 DLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI 272

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+   +D N+   LP+ +G++  L+ L + YN +   P  +  L  L+ L++  N
Sbjct: 273 GQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNN 332

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +N+  N   L+ +P+ IG L+ L+ LD+SNNQ+  LP     L
Sbjct: 333 QLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQL 390

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 391 KNLQTLNLWNN 401



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 135/230 (58%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L E+++  +P  IG L +L +LDL  N++  LP  IG L +L   
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L EL LG N L+ LP  IG L +L++ +++ N    LP  I
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL + YN+L   P+ +GK+  L+ L++  N +  LP  +  L +L+ L++S N
Sbjct: 296 GQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 355

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L+++P+ +     L  +++ NN   L  LP+ I  L+ L+ L++ NNQ 
Sbjct: 356 QLKTIPQEIGQLQNLKLLDLSNN--QLTTLPKEIEQLKNLQTLNLWNNQF 403



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L+ LP  IG L +L++L +  N L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  ++L  LP+ +GK+  L  L + +N +  LP  +  L +L+   +  N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L ++ +G+N   L  LP+ IG L+ L+   + NNQ  +LP     L
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHN--QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQL 298

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L   P+ I
Sbjct: 299 QNLQELYLSYNQLTTFPKEI 318



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  L L  NQ++ALP  + 
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L L +N L++LP  I  L +L+ L +  N L  LP  IGQ  +L+EL + YN+
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQ 172

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP+ +GK+  L++LS+  + +  LP  +  L +L ELD+S N+L  +P+ +     L
Sbjct: 173 LTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNL 232

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            +  + NN   L  LP+ IG L+ L EL + +NQ+ +LP     L  L+   +  N   +
Sbjct: 233 QRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 290

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 291 LPKEIGQL 298



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 26/300 (8%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  L L  N++ A+P  IG L +LK L L+ N++
Sbjct: 68  LQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQL 127

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  I  L +L  LDL  NQ++ LP  + +L  L+EL L  N L++LP  IG L +L+
Sbjct: 128 TTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQ 187

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  + L  LP  IG+  +L EL + +N+L  LP+ +G++  L+   +  N +  LP 
Sbjct: 188 LLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 247

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN--------------------- 310
            +  L +L EL +  N+L  +P+ +     L +  + NN                     
Sbjct: 248 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 307

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  L   P+ IG L+ L+ L++ NNQ+  LP+    L  L+ L + EN L+  P+ I ++
Sbjct: 308 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 367



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 122/215 (56%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L L   +++ LP  + +L  L+ LDLG N L++LP  IG L +L+ 
Sbjct: 37  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQL 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           LI+  N L  LP  IGQ  +L+ L ++ N+L  LP  + ++  L++L +  N +  LP  
Sbjct: 97  LILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL +S+N+L ++P+ +     L  +++    + L  LP+ IG L+ L ELD+
Sbjct: 157 IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYE--SQLTILPQEIGKLQNLHELDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S+NQ+ +LP     L  L+   +  N L + P+ I
Sbjct: 215 SHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 100/184 (54%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L    L  N++  +P  IG L +L +L L  N++  LP  IG L +L   
Sbjct: 222 LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRF 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ + LP  + +L  L+EL L  N L++ P  IG L  L+ L +  N L  LP  I
Sbjct: 282 VLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+LK +P+ +G++  L++L +  N +  LP  +  L +L+ L++  N
Sbjct: 342 EQLKNLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401

Query: 288 ELES 291
           +  S
Sbjct: 402 QFSS 405


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS+N+++ +P  I  L +L+ LDL  N++I LP  I  L +L  L
Sbjct: 62  LPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ++ LP  + +L  L+EL L +N L++ P  IG L  L+ L +  N ++ +P  I
Sbjct: 122 DLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ +GK+  L+ L++ YN IK LP  +  L  L+ L +  N
Sbjct: 182 EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  LP+ IG L+ L+ L ++NNQ+  +P     L
Sbjct: 242 QLTTLPQEIEKLQKLESLGLDNN--QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHL 299

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 300 QNLQDLYLVSNQLTTIPKEIGQL 322



 Score =  154 bits (389), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L+L  N+I  LP  I  L 
Sbjct: 172 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQ 231

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 232 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 291

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+EL
Sbjct: 292 IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQEL 351

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 352 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 409

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 410 EIGQLQNLQTLYLRNNQFSIEEK 432



 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++   P  IG L  L+ L+L AN+I  +P  I  L  L  L
Sbjct: 131 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 190

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L+L  N + +LP  I  L  L+ L +  N L  LP  I
Sbjct: 191 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 250

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L +D N+L  LP+ +G++  L+VL +  N +  +P  +  L +L++L +  N
Sbjct: 251 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 310

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++GNN   L  LP+ IG L+ L+EL +SNNQ+  +P     L
Sbjct: 311 QLTTIPKEIGQLQNLQMLDLGNN--QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 368

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 369 QNLQELYLSNNQLTTIPKEIGQL 391



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 153/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L L N   + +   P  IGKL  L  L+LS N+I  +P  I  L  L+ L
Sbjct: 134 EIGKLQNLQELYLSN---NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 190

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L  L +L+L  NQI  LP  + +L +L+ L L  N L++LP  I
Sbjct: 191 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 250

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L+ L ++ N L  LP  IGQ  +L+ L ++ N+L  +P+ +G +  L+ L +  N
Sbjct: 251 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 310

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L +L+ LD+  N+L  +P+ +     L ++ + NN   L  +P+ IG L
Sbjct: 311 QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN--QLTTIPKEIGQL 368

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +SNNQ+  +P     L  L+ L +  N L   P+ I ++
Sbjct: 369 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 414


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  154 bits (390), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/310 (37%), Positives = 165/310 (53%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ +P  I     LV LD+S N I+ +P +I    +L+  D   N + +LP+S  
Sbjct: 66  LSDNEIQIIPAEIANFMQLVELDVSRNDILGIPDSISHCKALQVADFSGNPLTKLPESFT 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +LV L+LR N ++ LP +LS+L +LEELDLG+N 
Sbjct: 126 ELRNLTCLSINDISLQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L SLP SIG L+SLK L ++ N L E+P  +G   SL  L V  N+L+ LPE +G + +L
Sbjct: 186 LYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  NNI  LP ++  L  L  L V  N+L  +PES+    +L ++ +  N   L++
Sbjct: 246 TDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTEN--QLQS 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LPRSIG L+ L  L+   NQ+  LP      S L V  V+EN L   P  +    +QA  
Sbjct: 304 LPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSEL----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVSGNR 369



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 144/254 (56%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP +IG LS+LVSL+L EN +  +P ++  L  L++LDL  N +  LP SIG L+SL
Sbjct: 140 LQLLPGNIGNLSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GN ++ +P  L  +  L  LD+  N L  LP+ +G L+SL  L+V  N+++ LP
Sbjct: 200 KDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG+   L  L+VD N+L  LPE++G   +L  L +  N ++ LP ++  L  L  L+ 
Sbjct: 260 ESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNC 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +   ++L    +  N   L  +P  +     L  LD+S N++  LP S 
Sbjct: 320 DRNQLLSLPKEIGGCSSLNVFCVREN--RLTRIPSELSQATELHVLDVSGNRLTHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + EN
Sbjct: 378 TTL-QLKALWLSEN 390



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 132/232 (56%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP+S+ +L  L  LDL  N + ++P +IG L SLK L L  N + E+P  +G++ SL
Sbjct: 163 LTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +  LV L +L +  NN+ SLP+SIG L  L  L V+ N L  LP
Sbjct: 223 LCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLRKLSILKVDQNQLAYLP 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG C SL EL +  N+L++LP ++GK+  L  L+   N +  LP  +   SSL    V
Sbjct: 283 ESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  L  AT L  +++  N   L  LP S+  L+ L+ L +S NQ
Sbjct: 343 RENRLTRIPSELSQATELHVLDVSGN--RLTHLPLSLTTLQ-LKALWLSENQ 391



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 145/272 (53%), Gaps = 6/272 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP    +L  L  L LS+N I  +PA I     L +LD+  N I+ +PDSI
Sbjct: 46  NQLRD----LPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDILGIPDSI 101

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
               +L   D  GN ++ LP + + L  L  L +   +L  LP +IG+L +L  L +  N
Sbjct: 102 SHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLVSLELREN 161

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP ++ Q   L EL +  N L +LP+++G + +L+ L +  N++ ++P  + ++ S
Sbjct: 162 VLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKS 221

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  LDVS N+LE +PE +    +L  + +  N  D  +LP SIG L  L  L +  NQ+ 
Sbjct: 222 LLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNID--SLPESIGKLRKLSILKVDQNQLA 279

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP+S      L  L + EN L+  PR+I ++
Sbjct: 280 YLPESIGNCESLSELVLTENQLQSLPRSIGKL 311



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 1/116 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + + +LP+SIG   SL  L L+EN++ ++P +IG L  L  L+   N+++ LP  IG   
Sbjct: 276 NQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCS 335

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           SL    +R N+++ +P  LS+   L  LD+  N L+ LP S+ +L  LK L +  N
Sbjct: 336 SLNVFCVRENRLTRIPSELSQATELHVLDVSGNRLTHLPLSLTTL-QLKALWLSEN 390



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +P+       L K+ + +N  +++ +P  I N   L ELD+S N I
Sbjct: 37  SLEELLLDANQLRDLPKQFFQLVKLRKLGLSDN--EIQIIPAEIANFMQLVELDVSRNDI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +PDS      L+V     NPL   P +  E+
Sbjct: 95  LGIPDSISHCKALQVADFSGNPLTKLPESFTEL 127


>gi|148230653|ref|NP_001085672.1| leucine-rich repeat-containing protein 40 [Xenopus laevis]
 gi|82236544|sp|Q6GPJ5.1|LRC40_XENLA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|49257387|gb|AAH73124.1| MGC84527 protein [Xenopus laevis]
          Length = 605

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 169/290 (58%), Gaps = 4/290 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + I  L +LV LD+ +N+I ++P  I  L++L+KL++  N+I +LP+ +  L 
Sbjct: 92  NKLQALSEDISLLPALVVLDIHDNQIASLPCAIRELTNLQKLNISHNKIKQLPNELQHLQ 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L    L+ NQ+  LP ++  L  LEELD+ +N L S+  S+G L  L K  + +N L  
Sbjct: 152 NLKSFLLQHNQLEELPDSIGHLSILEELDVSNNCLRSVSSSVGQLTGLVKFNLSSNKLTA 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +LR+L    N L+ +P +V  + +LE L +R N +  LP  +  L+ L+EL
Sbjct: 212 LPTEIGKMKNLRQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N+++++ PE L   ++L  + +   +  L+ LP+ I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGNNQIQTLGPEHLQNLSSLSVLEL--RYNKLKVLPKEISLLKGLERLDLSNNDIGSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
           D+   L  L+ L++  NPL    R+I+  G Q +++Y+   V+  D  TQ
Sbjct: 329 DTLGSLPNLKSLQLDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQ 378



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 143/320 (44%), Gaps = 51/320 (15%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+ +  LSSL  L+L  N++  +P  I  L  L++LDL  N I  LPD++G L +L  L 
Sbjct: 282 PEHLQNLSSLSVLELRYNKLKVLPKEISLLKGLERLDLSNNDIGSLPDTLGSLPNLKSLQ 341

Query: 169 LRGNQISA-----LPVALSRLV-----RLEELDLGSNNLSSLPDSIGSL----------- 207
           L GN +       L      L+     R++  D+ +   ++ PD+  +L           
Sbjct: 342 LDGNPLRGIRRDILNKGTQELLKYLKGRVQTPDMTTQEAANPPDTAMTLPSDSVINAHAI 401

Query: 208 ISLK---------KLIVET-----------------NDLEELPHTIGQCS-SLRELRVDY 240
           ++LK          LI E                  N L E+P  I +   S+ ++ + +
Sbjct: 402 MTLKTLEYCEKQASLIPEAVFNAAASSPITTVNFSKNQLTEVPARIVEMKDSVYDVNLGF 461

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++ ++   +  +  L  L +R N +  LP  M +L+ L+ + +SFN  +  P+ L    
Sbjct: 462 NKISSISLNLCMLLKLTHLDMRNNALASLPPEMEALTRLQSIILSFNRFKHFPDVLYTIP 521

Query: 301 TLVKMNIGNNFADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            L  + I +N   + ++ P  +  +  L  LD+ NN +  +P +      LR L ++ NP
Sbjct: 522 NLETILISSN--QIGSIDPIQLKKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNP 579

Query: 360 LEVPPRNIVEMGAQAVVQYM 379
              P   I+  G  A+++Y+
Sbjct: 580 FRNPRATILAKGTVAILEYL 599


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  154 bits (389), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS+N+++ +P  I  L +L+ LDL  N++I LP  I  L +L  L
Sbjct: 42  LPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQML 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ++ LP  + +L  L+EL L +N L++ P  IG L  L+ L +  N ++ +P  I
Sbjct: 102 DLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEI 161

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ +GK+  L+ L++ YN IK LP  +  L  L+ L +  N
Sbjct: 162 EKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKN 221

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  LP+ IG L+ L+ L ++NNQ+  +P     L
Sbjct: 222 QLTTLPQEIEKLQKLESLGLDNN--QLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHL 279

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 280 QNLQDLYLVSNQLTTIPKEIGQL 302



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L+L  N+I  LP  I  L 
Sbjct: 152 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQ 211

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 212 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 271

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+EL
Sbjct: 272 IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQEL 331

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 332 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 389

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 390 EIGQLQNLQTLYLRNNQFSIEEK 412



 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++   P  IG L  L+ L+L AN+I  +P  I  L  L  L
Sbjct: 111 LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L+L  N + +LP  I  L  L+ L +  N L  LP  I
Sbjct: 171 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L +D N+L  LP+ +G++  L+VL +  N +  +P  +  L +L++L +  N
Sbjct: 231 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 290

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++GNN   L  LP+ IG L+ L+EL +SNNQ+  +P     L
Sbjct: 291 QLTTIPKEIGQLQNLQMLDLGNN--QLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQL 348

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 349 QNLQELYLSNNQLTTIPKEIGQL 371



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IGKL  L  L+LS N+I  +P  I  L  L+ L L  N++  LP  IG L  L +L+
Sbjct: 135 PKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLN 194

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQI  LP  + +L +L+ L L  N L++LP  I  L  L+ L ++ N L  LP  IG
Sbjct: 195 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 254

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+ L ++ N+L  +P+ +G +  L+ L +  N +  +P  +  L +L+ LD+  N+
Sbjct: 255 QLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 314

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L  +P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P     L 
Sbjct: 315 LTILPKEIGKLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 372

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
            L+ L +  N L   P+ I ++
Sbjct: 373 NLQELYLSNNQLITIPKEIGQL 394


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 143/247 (57%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS NR+  +P  IG L  L+ LDL  N++  LP  I  L  L  L L  N+++ LP  
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKE 60

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L  L+EL+L SN  ++LP+ IG+L  L+KL +  + L  LP  IG   +L+EL ++ 
Sbjct: 61  IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS 120

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+   LPE +G +  L+ L + Y+ +  LP  +  L  L++L++  N+L+++P+ +    
Sbjct: 121 NQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQ 180

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++  N  +L  LP+ IGNL+ L+EL + +NQ+  LP+    L +L+ L +  N L
Sbjct: 181 NLKNLSLNGN--ELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRL 238

Query: 361 EVPPRNI 367
           +  P+ I
Sbjct: 239 KTLPKEI 245



 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 141/237 (59%), Gaps = 2/237 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L +LDL++N++  +P  I  L  L+ L L  N +  LP  IG+L +L  L
Sbjct: 11  LPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQEL 70

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ + LP  +  L +L++L L  + L++LP  IG+L +L++L + +N    LP  I
Sbjct: 71  NLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEI 130

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ L ++Y+RL  LP+ +GK+  L+ L++  N +K LP  +  L +L+ L ++ N
Sbjct: 131 GNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGN 190

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           EL ++P+ +     L ++++G+N   L  LP  IGNL+ L+EL ++ N+++ LP   
Sbjct: 191 ELTTLPKEIGNLQNLQELSLGSN--QLTTLPEKIGNLQKLQELSLAGNRLKTLPKEI 245



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 152/281 (54%), Gaps = 25/281 (8%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + ++ LP  I KL  L +L L  N +  +P  IG L +L++L+L++N+   LP+ IG+L
Sbjct: 28  QNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNL 87

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L L  ++++ LP  +  L  L+EL+L SN  ++LP+ IG+L  L+ L +  + L 
Sbjct: 88  QKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLT 147

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+   L++L +  N+LK LP+ +GK+  L+ LS+  N +  LP  + +L +L+E
Sbjct: 148 TLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQNLQE 207

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG------------------- 322
           L +  N+L ++PE +     L ++++  N   L+ LP+ IG                   
Sbjct: 208 LSLGSNQLTTLPEKIGNLQKLQELSLAGN--RLKTLPKEIGNLQNLQELNLNNNQLTTLP 265

Query: 323 ----NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
               NL+ LE L++S N +   P+    L +L+ L +  NP
Sbjct: 266 KEIENLQSLESLNLSGNSLISFPEEIGKLQKLKWLYLGGNP 306


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  154 bits (389), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 150/253 (59%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L  NR+  +P  +G L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 109 LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQIL 168

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           + +GNQ++  P  + +L +L+EL+LG N L++L + +  L +L+ L + +N L  LP  I
Sbjct: 169 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 228

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L++L +  N+L  LPE +G++  L+ L +  N ++ LP  +  L  L+ L +  N
Sbjct: 229 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 288

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L ++N+G  F  L  LP+ IG L+ L+EL++  NQ+  LP     L
Sbjct: 289 QITTFPKEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQL 346

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 347 QKLRKLNLYNNPI 359



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 163/311 (52%), Gaps = 5/311 (1%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L+ L+L  N L+ LP+ IG L +L+ L  + N L   P  IGQ   L+EL + 
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLG 194

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           +NRL  L E V ++  L++L +  N +  LP  +  LS L++L +  N+L ++PE +   
Sbjct: 195 FNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQL 254

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P     L  L+ L +  N 
Sbjct: 255 KKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 312

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 313 LTTLPQEIGQL 323



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 130/226 (57%), Gaps = 3/226 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL    ++ +  LP+ IG+L +L  L+   N++   P  IG L  L++L
Sbjct: 135 EVGQLQNLQVLNLD---LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQEL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  L + +  L +L  LDL  N ++ LP  + +L +L++L L  N L++LP+ I
Sbjct: 192 NLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L++L +  N L  LP  I Q   L+ L ++ N++   P+ +G++  L+ L++ +N
Sbjct: 252 GQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  LP  +  L +L+EL++ FN+L ++P+ +     L K+N+ NN
Sbjct: 312 QLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 69/199 (34%), Positives = 113/199 (56%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +   P  IG+L  L  L+L  NR+  +   +  L +L+ LDL +N + 
Sbjct: 163 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 222

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L L GNQ++ LP  + +L +L+EL LG+N L +LP  I  L  L+ 
Sbjct: 223 TLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQT 282

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +E N +   P  IGQ  +L+EL + +N+L  LP+ +G++  L+ L++ +N +  LP  
Sbjct: 283 LYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKE 342

Query: 273 MSSLSSLRELDVSFNELES 291
           +  L  LR+L++  N + S
Sbjct: 343 VGQLQKLRKLNLYNNPIAS 361


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  154 bits (388), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 168/293 (57%), Gaps = 9/293 (3%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +DL + N     +  +P  IG+   L  LDLS N+I  +P ++  L  L +L++ +N + 
Sbjct: 206 KDLRILNLKHSELTIVPSEIGECHELQKLDLSFNKISKIPESLYALEQLTELNMRSNALT 265

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            +PD IG L S+  L+L  N+I  +P +L  L +L EL++GSN L+S+PD IG L S++ 
Sbjct: 266 SVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMET 325

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++++P ++     L EL ++ N L ++P+ +GK+ +++ L++  N I+++P +
Sbjct: 326 LDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPAS 385

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           + +L  L ELD+ +N L ++P+ +    ++  +N+ NN   +  +P S+  L+ L ELD+
Sbjct: 386 LCTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNN--KMEKIPDSLCALQQLTELDM 443

Query: 333 SN------NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++      N +  +PD    L  +++L +  N ++  P ++  +  Q    YM
Sbjct: 444 NDXXXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCAL-QQLTELYM 495



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 164/288 (56%), Gaps = 28/288 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD I KL S+  L+L  N++  +PA++  L  L +L ++ N +  +PD IG L S+  L
Sbjct: 549 IPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETL 608

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+I  +P +L  L +L EL++ SN L+S+PD IG L S+K L + +N +E++P ++
Sbjct: 609 NLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASL 668

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV--- 284
                L EL +  N L A+P+ + K+ ++++L++  N ++++P ++ +L  L ELD+   
Sbjct: 669 CALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSN 728

Query: 285 --------------------SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
                                 N++E +P+SLC    L  +N+ +N   L A+P  IG L
Sbjct: 729 ALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNA--LTAIPDEIGKL 786

Query: 325 EMLEELDISNNQIRVLPDSF-RMLSRLRV--LRVQENPLEVPPRNIVE 369
           + +  L++S N+I  +PDS    + +L++  LR+ EN L+  P  ++E
Sbjct: 787 KSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIE 834



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 156/263 (59%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD I KL S+  L+L  N++  +PA++  L  L +L ++ N +  +PD I  L S+  L
Sbjct: 457 IPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKIL 516

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+I  +P +L  L +L EL++ SN L+S+PD I  L S+K L ++ N ++++P ++
Sbjct: 517 NLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASL 576

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L EL ++ N L ++P+ +GK+ ++E L++ +N I+++P ++ +L  L EL++  N
Sbjct: 577 CALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSN 636

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L SVP+ +    ++  +N+ +N   +  +P S+  L+ L EL + +N +  +PD    L
Sbjct: 637 ALTSVPDEIGKLKSMKTLNLSSN--KIEKIPASLCALDQLTELIMRSNALTAIPDEISKL 694

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             +++L +  N +E  P ++  +
Sbjct: 695 KSMKILNLDNNKMEKIPDSLCAL 717



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 162/298 (54%), Gaps = 31/298 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD IGKL S+ +L+LS N+I  +PA++  L  L +L++ +N +  +PD IG L S+  L
Sbjct: 267 VPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETL 326

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  +P +L  L +L EL +  N L+S+PD IG L S+K L + +N +E++P ++
Sbjct: 327 DLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASL 386

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS-- 285
                L EL + YN L A+P+ + K+ ++ +L++  N ++++P ++ +L  L ELD++  
Sbjct: 387 CTLEQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDX 446

Query: 286 ---------------------------FNELESVPESLCFATTLVKMNIGNNFADLRALP 318
                                       N+++ +P SLC    L ++ +  N   L ++P
Sbjct: 447 XXMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNA--LTSIP 504

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
             I  L+ ++ L++  N+I  +PDS   L +L  L +  N L   P  I ++ +  ++
Sbjct: 505 DEISKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKIL 562



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/301 (29%), Positives = 170/301 (56%), Gaps = 5/301 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S  K  + LNL     + I+ +PDS+  L  L  L+++ N + ++P  I  L S+K L
Sbjct: 506 EISKLKSMKILNL---YFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKIL 562

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++ ++P S+  L  L  L + GN ++++P  + +L  +E L+L  N +  +PDS+
Sbjct: 563 NLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSL 622

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +L  L +L + +N L  +P  IG+  S++ L +  N+++ +P ++  +  L  L +R N
Sbjct: 623 CALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSN 682

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +S L S++ L++  N++E +P+SLC    L +++I +N   L ++P  IG L
Sbjct: 683 ALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNA--LTSIPDEIGKL 740

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
           + ++ L++ NN++  +PDS   L +L  L ++ N L   P  I ++ +   +    + +E
Sbjct: 741 KSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIE 800

Query: 385 K 385
           K
Sbjct: 801 K 801



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/307 (29%), Positives = 171/307 (55%), Gaps = 11/307 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE------NRIVAVPATIGGL 138
           E+S  K    LNL N  M+ I   PDS+  L  L  LD+++      N + ++P  I  L
Sbjct: 408 EISKLKSMNILNLDNNKMEKI---PDSLCALQQLTELDMNDXXXMASNALTSIPDEISKL 464

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            S+K L+L  N++ ++P S+  L  L  L + GN ++++P  +S+L  ++ L+L  N + 
Sbjct: 465 KSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKID 524

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +PDS+ +L  L +L + +N L  +P  I +  S++ L +D N++K +P ++  +  L  
Sbjct: 525 KIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTE 584

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N +  +P  +  L S+  L++SFN++E +P+SLC    L ++N+ +N   L ++P
Sbjct: 585 LYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNA--LTSVP 642

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
             IG L+ ++ L++S+N+I  +P S   L +L  L ++ N L   P  I ++ +  ++  
Sbjct: 643 DEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNL 702

Query: 379 MADLVEK 385
             + +EK
Sbjct: 703 DNNKMEK 709



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 83/271 (30%), Positives = 152/271 (56%), Gaps = 4/271 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL     + IE +PDS+  L  L  L++  N + +VP  IG L S+K L
Sbjct: 598 EIGKLKSMETLNLS---FNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLKSMKTL 654

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L +N+I ++P S+  L  L  L +R N ++A+P  +S+L  ++ L+L +N +  +PDS+
Sbjct: 655 NLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLKSMKILNLDNNKMEKIPDSL 714

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +L  L +L + +N L  +P  IG+  S++ L +D N+++ +P+++  +  L  L++ +N
Sbjct: 715 CALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLTDLNMEHN 774

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM-NIGNNFADLRALPRSIGN 323
            +  +P  +  L S+  L++SFN++E +P+SLC     +K+ ++  N   L+  P  +  
Sbjct: 775 ALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENKLKEFPWQVIE 834

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
              L EL +  N+++ +PD    L R    R
Sbjct: 835 ELPLCELSLCGNKLQTVPDHIGRLLRYHPCR 865



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 153/317 (48%), Gaps = 33/317 (10%)

Query: 85   EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
            E+S  K  + LNL N  M+ I   PDS+  L  L  LD+  N + ++P  IG L S+K L
Sbjct: 690  EISKLKSMKILNLDNNKMEKI---PDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKIL 746

Query: 145  DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +L  N++ ++PDS+  L  L  L++  N ++A+P  + +L  +  L+L  N +  +PDS+
Sbjct: 747  NLDNNKMEKIPDSLCALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSL 806

Query: 205  GSLISLKKLI---VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG---------K 252
             + I   KLI   +  N L+E P  + +   L EL +  N+L+ +P+ +G         K
Sbjct: 807  CAGIKKLKLIHLRLNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRK 866

Query: 253  IHTLEVLSVRYNNI-----------------KQLPTTMSSLSSLRELDVSFNELESVPES 295
               + ++  R   I                   L T  ++     +LD+S+ + +S+  S
Sbjct: 867  CKHVSLMHYRKTCIYFGYSTKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLS 926

Query: 296  LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
               +   ++M +     +L  +P  IG    L++L++S N+I  +PDS   L +L  + +
Sbjct: 927  RLGSYKHLRM-LNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINM 985

Query: 356  QENPLEVPPRNIVEMGA 372
              N L   P  I ++ +
Sbjct: 986  GSNALTSIPDEISKLKS 1002



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 113/198 (57%), Gaps = 3/198 (1%)

Query: 189 ELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           ELDL      S+  S +G    L+ L ++ ++L  +P  IG+C  L++L + +N++  +P
Sbjct: 186 ELDLSHKKHKSIDLSRLGLYKDLRILNLKHSELTIVPSEIGECHELQKLDLSFNKISKIP 245

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           E++  +  L  L++R N +  +P  +  L S++ L++S N++E +P SLC    L ++N+
Sbjct: 246 ESLYALEQLTELNMRSNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNM 305

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           G+N   L ++P  IG L+ +E LD+S N+I  +PDS   L +L  L + +N L   P  I
Sbjct: 306 GSNA--LTSIPDEIGKLKSMETLDLSFNKIDKIPDSLCALEKLTELYMNDNALTSVPDEI 363

Query: 368 VEMGAQAVVQYMADLVEK 385
            ++ +   +   ++ +EK
Sbjct: 364 GKLKSMKTLNLSSNKIEK 381



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 160/334 (47%), Gaps = 67/334 (20%)

Query: 94   DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLK--KLDLHANR 150
            DLN+++  +  I   PD IGKL S+ +L+LS N+I  +P ++  G+  LK   L L+ N+
Sbjct: 768  DLNMEHNALTAI---PDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLRLNENK 824

Query: 151  IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE---------------------- 188
            + E P  + + L L  L L GN++  +P  + RL+R                        
Sbjct: 825  LKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLRYHPCRKCKHVSLMHYRKTCIYFGY 884

Query: 189  ---------------------------ELDLGSNNLSSLPDS-IGSLISLKKLIVETNDL 220
                                       +LDL      S+  S +GS   L+ L +E  +L
Sbjct: 885  STKWRMRRRRGMTTDLSTKDTATHVGMKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGEL 944

Query: 221  EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
              +P  IG+C  L++L + +N++  +P+++  +  L  +++  N +  +P  +S L S++
Sbjct: 945  TIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMK 1004

Query: 281  ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
             L++SFN++  +P+SLC    L  +N+  N   L A+P     L+  + LDI +N   V 
Sbjct: 1005 TLNLSFNKIAKIPDSLCALEQLRILNMNGNA--LTAIPSV--KLQH-QTLDI-DNGASVF 1058

Query: 341  PDSFRM---LSRLRVLRVQ--ENPLEVPPRNIVE 369
               F M   + +L+++R+Q  +N L+  P  I+E
Sbjct: 1059 SLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIE 1092



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 102/204 (50%), Gaps = 26/204 (12%)

Query: 119  VSLDLSENRIVAVP-ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
            + LDLS  +  ++  + +G    L+ L+L    +  +P  IG+   L  L+L  N+I+ +
Sbjct: 911  MKLDLSYGKHKSIDLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKI 970

Query: 178  PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
            P +L  L +L E+++GSN L+S+PD I  L S+K L +  N + ++P ++     LR L 
Sbjct: 971  PDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILN 1030

Query: 238  VDYNRLKALPEAVGKIHTLEV------------------------LSVRYNNIKQLP-TT 272
            ++ N L A+P    +  TL++                        L +  N +K+ P   
Sbjct: 1031 MNGNALTAIPSVKLQHQTLDIDNGASVFSLCFGMSERIKKLKLIRLQLNDNKLKEFPWQI 1090

Query: 273  MSSLSSLRELDVSFNELESVPESL 296
            +  L SL +L +  NEL++VP+ +
Sbjct: 1091 IEELHSLYKLSLCGNELQTVPDHI 1114



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 103/204 (50%), Gaps = 21/204 (10%)

Query: 83   LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
            L  + S K  R LNL++     +  +P  IG+   L  L+LS N+I  +P ++  L  L 
Sbjct: 925  LSRLGSYKHLRMLNLEH---GELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLT 981

Query: 143  KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
            ++++ +N +  +PD I  L S+  L+L  N+I+ +P +L  L +L  L++  N L+++P 
Sbjct: 982  EINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPS 1041

Query: 203  SIGSLISLKKLIVETNDLEELPHTIGQCSSLRE---------LRVDYNRLKALP-EAVGK 252
                     KL  +T D++        C  + E         L+++ N+LK  P + + +
Sbjct: 1042 V--------KLQHQTLDIDNGASVFSLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIEE 1093

Query: 253  IHTLEVLSVRYNNIKQLPTTMSSL 276
            +H+L  LS+  N ++ +P  +  L
Sbjct: 1094 LHSLYKLSLCGNELQTVPDHIGRL 1117



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/167 (28%), Positives = 78/167 (46%), Gaps = 25/167 (14%)

Query: 103  DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            + I  +PDS+  L  L  +++  N + ++P  I  L S+K L+L  N+I ++PDS+  L 
Sbjct: 965  NKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALE 1024

Query: 163  SLVYLDLRGNQISALP-VALS-----------------------RLVRLEELDLGSNNLS 198
             L  L++ GN ++A+P V L                        + ++L  L L  N L 
Sbjct: 1025 QLRILNMNGNALTAIPSVKLQHQTLDIDNGASVFSLCFGMSERIKKLKLIRLQLNDNKLK 1084

Query: 199  SLP-DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
              P   I  L SL KL +  N+L+ +P  IG+        V  +RL+
Sbjct: 1085 EFPWQIIEELHSLYKLSLCGNELQTVPDHIGRLLRYHPCEVCEHRLR 1131


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 150/268 (55%), Gaps = 5/268 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  NR+  +P  IG L +L+ L
Sbjct: 85  EIGQLKNLRKLNLHD---NQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVL 141

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N+   +P  IG L +L  L+L  NQ++ALP  + +L  L+ LDLGSN L++LP+ I
Sbjct: 142 KLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 201

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L + TN L  LP+ IGQ  +L++L +  N+L  LP  +G++  L+ L +R N
Sbjct: 202 GQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSN 261

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  I  L
Sbjct: 262 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPEEIEQL 319

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRV 352
           + L+ LD+ +NQ+  LP+    L  L++
Sbjct: 320 KNLQVLDLGSNQLTTLPEGIGQLQNLQL 347



 Score =  151 bits (381), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 159/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 62  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKEL 118

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +NR+  LP+ IG L +L  L L  NQ   +P  + +L  L+ L+LG+N L++LP+ I
Sbjct: 119 SLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEI 178

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L + +N L  LP+ IGQ   L++L +  NRL  LP  +G++  L+ L +  N
Sbjct: 179 GQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSN 238

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +  N L ++ + +     L  +++ NN   L   P+ I  L
Sbjct: 239 QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQL 296

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP+    L  L+VL +  N L   P  I ++
Sbjct: 297 KNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQL 342



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 140/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 49  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 108

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L +  
Sbjct: 109 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 168

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G++  L+ L +  N +  LP  +  L  L++L +S N L ++P  +    
Sbjct: 169 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 228

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + +G+N   L  LP  IG L+ L+ L + +N++  L      L  L+ L +  N L
Sbjct: 229 NLQDLYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQL 286

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 287 TTFPKEIEQL 296



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 35  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 94

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  NRL  LP  +G++  L VL + +N  K +P  
Sbjct: 95  LNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKE 154

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++  N+L ++P  +     L  +++G+N   L  LP  IG L+ L++L +
Sbjct: 155 IGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSN--RLTTLPNEIGQLQKLQDLYL 212

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP+    L  L+ L +  N L + P  I ++
Sbjct: 213 STNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQL 250


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 142/260 (54%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD IG   SLV+L   +N +  +P +IG L  L++L L  NR+ +LP SIGD+ SL  L
Sbjct: 176 LPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ NQ+  LP ++  L  L+ L L  N+L  LP S+  L  L +L +  N L  +P  I
Sbjct: 236 YLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ +SL +L + YNRL  LP ++G +  L  L V  N++  LP +   L++L  L+++ N
Sbjct: 296 GRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQN 355

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P S+     L  +++   + DL  LP  +G L  LE LD+  N +R LP     L
Sbjct: 356 PLTSLPSSVGALKRLTWLSLA--YCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGL 413

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L +  N L   PR +
Sbjct: 414 GALTTLNLASNQLSWVPRTL 433



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 149/256 (58%), Gaps = 2/256 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP SIG LS L +L LS N +  +PA++  LS L +L+L  N +  +P++IG L 
Sbjct: 240 NQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLA 299

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N+++ LP +L  L  L  LD+  N+L  LPDS   L +L  L +  N L  
Sbjct: 300 SLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTS 359

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++G    L  L + Y  L+ LP  +G +H LE L +  NN++ LP  +S L +L  L
Sbjct: 360 LPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGALTTL 419

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           +++ N+L  VP +L     LV +++ +N  +L +LPR++G LE L +LD++ NQ+  +P 
Sbjct: 420 NLASNQLSWVPRTLGLLRNLVNLDLADN--ELSSLPRALGGLESLRKLDVAENQLTWIPR 477

Query: 343 SFRMLSRLRVLRVQEN 358
           S   L +L  L ++ N
Sbjct: 478 SVCDLPKLETLVLRGN 493



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/263 (36%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SIG ++SL  L L +N++  +PA+IG LS L+ L L  N + ELP S+ DL  L  L
Sbjct: 222 LPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTEL 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N ++ +P A+ RL  L++L L  N L+ LP S+G+L  L  L V  N L +LP + 
Sbjct: 282 NLADNWLTHVPEAIGRLASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSLHDLPDSF 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++L  L +  N L +LP +VG +  L  LS+ Y +++ LP  +  L  L  LD+  N
Sbjct: 342 DGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGN 401

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P  L     L  +N+ +N   L  +PR++G L  L  LD+++N++  LP +   L
Sbjct: 402 NLRDLPFQLSGLGALTTLNLASN--QLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGL 459

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             LR L V EN L   PR++ ++
Sbjct: 460 ESLRKLDVAENQLTWIPRSVCDL 482



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 150/288 (52%), Gaps = 26/288 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G LSSL  L L +N++  +P ++G   SL  L L  N + ELPD IGD  SLV L
Sbjct: 131 LPEVVGHLSSLTQLYLQKNQLPGLPDSLGA-PSLHTLVLDGNHLAELPDWIGDTQSLVAL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
               N ++ LP ++  L+RL+EL L  N L  LP SIG + SL KL ++ N L+ LP +I
Sbjct: 190 SADDNVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASI 249

Query: 228 GQCSSLRELRVDYNRLKALP-----------------------EAVGKIHTLEVLSVRYN 264
           G  S L+ L +  N L+ LP                       EA+G++ +L+ LS+ YN
Sbjct: 250 GNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP ++ +L  L  LDVS N L  +P+S      L  +N+  N   L +LP S+G L
Sbjct: 310 RLTELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQN--PLTSLPSSVGAL 367

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           + L  L ++   +  LP     L RL  L +  N L   P  +  +GA
Sbjct: 368 KRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGA 415



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 144/263 (54%), Gaps = 6/263 (2%)

Query: 108 LPDSIGKLSSL---VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           LP   G+L  L     L+LS NR+  +P T+G ++ L++L L +N   ELP  +  L  L
Sbjct: 36  LPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGELPPQVALLGGL 95

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           V L L GN ++ LP   +RL RL  L L  N  ++LP+ +G L SL +L ++ N L  LP
Sbjct: 96  VELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLP 155

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            ++G   SL  L +D N L  LP+ +G   +L  LS   N + +LP ++ +L  L+EL +
Sbjct: 156 DSLG-APSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSL 214

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+    +L K+ +  N   L+ LP SIGNL  L+ L +S N +  LP S 
Sbjct: 215 TGNRLRKLPTSIGDMASLTKLYLQKN--QLQTLPASIGNLSELQTLALSGNHLEELPASV 272

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             LSRL  L + +N L   P  I
Sbjct: 273 ADLSRLTELNLADNWLTHVPEAI 295



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/204 (38%), Positives = 115/204 (56%), Gaps = 5/204 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           +N L D    LPDS   L++L +L+L++N + ++P+++G L  L  L L    +  LP  
Sbjct: 331 RNSLHD----LPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWLSLAYCDLETLPAG 386

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G L  L  LDL GN +  LP  LS L  L  L+L SN LS +P ++G L +L  L +  
Sbjct: 387 LGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTLGLLRNLVNLDLAD 446

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N+L  LP  +G   SLR+L V  N+L  +P +V  +  LE L +R N +  LPT+     
Sbjct: 447 NELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVLRGNRLADLPTSNWQKL 506

Query: 278 SLRELDVSFNE-LESVPESLCFAT 300
           +L+ELD+S N  L +VPE+    T
Sbjct: 507 TLKELDLSDNPLLSAVPENWDVGT 530



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 115/229 (50%), Gaps = 27/229 (11%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP S+G L  L +LD+S N +  +P +  GL++L  L+L  N +  LP S+G L  L +L
Sbjct: 314 LPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLTWL 373

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP  L  L RLE LDL  NNL  LP  +  L +L  L + +N L  +P T+
Sbjct: 374 SLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSWVPRTL 433

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L  L +  N L +LP A+G                        L SLR+LDV+ N
Sbjct: 434 GLLRNLVNLDLADNELSSLPRALG-----------------------GLESLRKLDVAEN 470

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNN 335
           +L  +P S+C    L  + + GN  AD   LP S      L+ELD+S+N
Sbjct: 471 QLTWIPRSVCDLPKLETLVLRGNRLAD---LPTSNWQKLTLKELDLSDN 516



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 46/224 (20%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLI---VETNDLEELPHTIGQCSSLRELRVDY------ 240
           LDL +  L+ LP   G L  L  +    +  N L  LP T+G+ + LR L +D       
Sbjct: 26  LDLSNLGLTGLPAEFGRLPELGPVTFLNLSGNRLATLPETLGEVTGLRRLWLDSNGFGEL 85

Query: 241 -----------------NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
                            N L  LPE   ++  L  L +  N    LP  +  LSSL +L 
Sbjct: 86  PPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLY 145

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFAD--------------------LRALPRSIGN 323
           +  N+L  +P+SL   +    +  GN+ A+                    L  LP SIG 
Sbjct: 146 LQKNQLPGLPDSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGA 205

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L  L+EL ++ N++R LP S   ++ L  L +Q+N L+  P +I
Sbjct: 206 LIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASI 249


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  LP  IGKL SL  L L +N++  +P     L  L++L L  N++  +P  I  L 
Sbjct: 155 DPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQ 214

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  +D   NQ+  LP  +  L  L++L L SN ++ LP  IG+L  L+KL + +N +  
Sbjct: 215 NLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITI 274

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L  L ++ N+L  LP+ +G++  L+VL + +NN+  +P  + +L +L+ L
Sbjct: 275 LPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNLQTL 334

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D++ N+L ++P+ +     L  +++ NN   L  LP+ IGNL+ LE LD+S+N +   P+
Sbjct: 335 DLNNNKLTTLPKEIGNLQNLQTLDLNNN--KLTTLPQEIGNLQSLESLDLSDNPLTSFPE 392

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ LR++  P  +P +
Sbjct: 393 EIGKLQHLKWLRLENIPTLLPQK 415



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 92/155 (59%), Gaps = 3/155 (1%)

Query: 217 TND-LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           +ND L  LP  IG+  SL+EL +  N+L  +P+   ++  L+ LS+ +N +  +P  +  
Sbjct: 153 SNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQ 212

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +L+E+D + N+L+++P+ +     L K+ + +N   +  LP+ IGNL+ L++L +S+N
Sbjct: 213 LQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSN--KITILPKEIGNLQHLQKLYLSSN 270

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +I +LP     L +L  L ++ N L   P+ I ++
Sbjct: 271 KITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQL 305



 Score = 39.3 bits (90), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 308 GNNFAD-LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           G N  D L  LP+ IG L+ L+EL +  NQ+  +P  F  L  L+ L +  N L   P+ 
Sbjct: 150 GENSNDPLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKE 209

Query: 367 IVEM 370
           I ++
Sbjct: 210 IEQL 213


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 5/268 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL +   +    LP  + KL +L  L L  NR+  +P  IG L +L+ L
Sbjct: 87  EIGQLKNLRKLNLHD---NQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N+   +P  IG L +L  L+L  NQ++ALP  + +L  L+ LDLGSN L++LP+ I
Sbjct: 144 KLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L + TN L  LP+ IGQ  +L+EL +  N+L  LP  +G++  L+ L +R N
Sbjct: 204 GQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  I  L
Sbjct: 264 RLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPEEIEQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRV 352
           + L+ LD+ +NQ+  +P     L  L++
Sbjct: 322 KNLQVLDLGSNQLTTIPKEIGQLQNLQL 349



 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/286 (33%), Positives = 160/286 (55%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 64  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKEL 120

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +NR+  LP+ IG L +L  L L  NQ   +P  + +L  L+ L+LG+N L++LP+ I
Sbjct: 121 SLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEI 180

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L + +N L  LP+ IGQ   L++L +  NRL  LP  +G++  L+ L +  N
Sbjct: 181 GQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSN 240

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L +  N L ++ + +     L  +++ NN   L   P+ I  L
Sbjct: 241 QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNN--QLTTFPKEIEQL 298

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP+    L  L+VL +  N L   P+ I ++
Sbjct: 299 KNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQL 344



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 141/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L +  
Sbjct: 111 VEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGN 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G++  L+ L +  N +  LP  +  L  L++L +S N L ++P  +    
Sbjct: 171 NQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQ 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ +G+N   L  LP  IG L+ L+ L + +N++  L      L  L+ L +  N L
Sbjct: 231 NLQELYLGSN--QLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQL 288

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 289 TTFPKEIEQL 298



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  NRL  LP  +G++  L VL + +N  K +P  
Sbjct: 97  LNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++  N+L ++P  +     L  +++G+N   L  LP  IG L+ L++L +
Sbjct: 157 IGQLKNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSN--RLTTLPNEIGQLQKLQDLYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP+    L  L+ L +  N L + P  I ++
Sbjct: 215 STNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQL 252


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 5/280 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R LNL    + ++   P  IG+L+SL  L L  N++ +VPA IG L+SL+ L L +N++ 
Sbjct: 53  RKLNLGRNQLTSV---PAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLT 109

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            +P  IG L SL    L  NQ+++LP  + +L  LE L L  N L+S+P  I  + +L+ 
Sbjct: 110 SVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEA 169

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ +SL+EL +  N+L ++P  +G++  LE LS+  N +  +P  
Sbjct: 170 LWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAE 229

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SL+ L +  N+L SVP  +   T L  +N+ +N   L ++P  IG L  L+ L +
Sbjct: 230 IGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESN--QLTSVPAEIGQLASLKRLIL 287

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           S NQ+  +P     LS L  L ++ N L   P  I ++ +
Sbjct: 288 SRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAEIGQLAS 327



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 79/189 (41%), Positives = 124/189 (65%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SL  L L  N++ +VPA IG L+ L+ L L +N++  +P  IG L SL +L
Sbjct: 180 LPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFL 239

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+GNQ++++P  + +L  LE L+L SN L+S+P  IG L SLK+LI+  N L  +P  I
Sbjct: 240 HLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEI 299

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ SSL  L ++ N+L ++P  +G++ +L++L + YN +  +P  +  L+SL  L ++ N
Sbjct: 300 GQLSSLDGLNLERNQLTSVPAEIGQLASLKLLHLSYNQLTSVPAEIWQLASLEWLWLNNN 359

Query: 288 ELESVPESL 296
           EL SVP ++
Sbjct: 360 ELTSVPAAI 368



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/240 (35%), Positives = 143/240 (59%), Gaps = 2/240 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+ L  L L+ N++ +VPA I  +++L+ L L+ N++  LP  IG L SL  L
Sbjct: 134 LPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKEL 193

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  LE L L SN L+S+P  IG L SLK L ++ N L  +P  I
Sbjct: 194 GLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEI 253

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ + L  L ++ N+L ++P  +G++ +L+ L +  N +  +P  +  LSSL  L++  N
Sbjct: 254 GQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERN 313

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +    +L  +++  ++  L ++P  I  L  LE L ++NN++  +P + R L
Sbjct: 314 QLTSVPAEIGQLASLKLLHL--SYNQLTSVPAEIWQLASLEWLWLNNNELTSVPAAIREL 371



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 135/243 (55%), Gaps = 2/243 (0%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA +G LS+L+KL+L  N++  +P  IG L SL  L L  NQ++++P  + +L  LE 
Sbjct: 41  AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEV 100

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L L SN L+S+P  IG L SL+   +  N L  LP  IGQ + L  L +  N+L ++P  
Sbjct: 101 LYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE 160

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           + +I  LE L +  N +  LP  +  L+SL+EL +  N+L SVP  +   T L  +++ +
Sbjct: 161 IWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLTSVPADIGQLTLLEGLSLDS 220

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L ++P  IG L  L+ L +  NQ+  +P     L+ L  L ++ N L   P  I +
Sbjct: 221 N--QLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEGLNLESNQLTSVPAEIGQ 278

Query: 370 MGA 372
           + +
Sbjct: 279 LAS 281


>gi|397467362|ref|XP_003805390.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           paniscus]
          Length = 995

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L++S N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 74  VSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 133

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 134 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 193

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 194 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 253

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 254 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 311

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 312 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 352



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/169 (35%), Positives = 92/169 (54%), Gaps = 4/169 (2%)

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLKAL-PEAVGKIHTLEVLSVRY 263
           +L SL+ L++  N    LP  + +    L EL V +NRL AL  E V  +  L  L+V +
Sbjct: 28  ALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALRELRKLNVSH 87

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  + +L+ L ELDVSFN L  +P+SL   + L  +++ +N   L A PR +  
Sbjct: 88  NQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHN--QLTAFPRQLLQ 145

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L  LEELD+S+N++R LP+    L  L++L +    L   P    E+ +
Sbjct: 146 LAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELAS 194



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 68/205 (33%), Positives = 100/205 (48%), Gaps = 25/205 (12%)

Query: 161 LLSLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           L SL  L LR N+ + LP A++ L   L ELD+  N L++L   + S +           
Sbjct: 29  LGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALR---------- 78

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
                        LR+L V +N+L ALP  +G +  LE L V +N +  LP ++S LS L
Sbjct: 79  ------------ELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRL 126

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R LDV  N+L + P  L     L ++++ +N   LR LP  I  L  L+ L +S  ++  
Sbjct: 127 RTLDVDHNQLTAFPRQLLQLAALEELDVSSN--RLRGLPEDISALRALKILWLSGAELGT 184

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPP 364
           LP  F  L+ L  L +  N L+  P
Sbjct: 185 LPAGFCELASLESLMLDNNGLQALP 209


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  153 bits (387), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 151/267 (56%), Gaps = 6/267 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L+L NKL    + LP  IGKL  L  LDL  N++  +P  I  L +L +L+L+ N+  
Sbjct: 46  RILSLHNKL----KTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFT 101

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            +P+ IG L +L  L + GNQ+  LP  + +L  L+ L L +N L++LP+ I  L +L+K
Sbjct: 102 TIPNEIGYLKNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQK 161

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IG+  +L +L ++YN L  LP  +GK+  L+ L++ YN +  LP  
Sbjct: 162 LYLSENQLTILPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKE 221

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L  L  L +S+N+ +++P+ +     L  + + +N   L+  P  IG L+ LE LD+
Sbjct: 222 IRELQKLTVLYLSYNQFKTLPKEIGELQKLTVLYLRSN--QLKMFPNEIGKLKELESLDL 279

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENP 359
           S+NQ+  LP     L  LR L + + P
Sbjct: 280 SHNQLTTLPKEIGELQNLRKLYLDDIP 306



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/233 (34%), Positives = 124/233 (53%), Gaps = 26/233 (11%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L LH N++  LP  IG L  L  LDLRGNQ++ LP  + +L  L EL+L  N  +++P+ 
Sbjct: 48  LSLH-NKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNE 106

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L                        +L+EL +  N+LK LP+ +GK+  L+VL +  
Sbjct: 107 IGYL-----------------------KNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSN 143

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L++L +S N+L  +PE +     L K+++  N+ +L  LP  IG 
Sbjct: 144 NKLATLPNEIRKLQNLQKLYLSENQLTILPEEIGKLKNLTKLDL--NYNELTTLPNEIGK 201

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           L+ L+EL +  NQ+ VLP   R L +L VL +  N  +  P+ I E+    V+
Sbjct: 202 LQNLQELTLGYNQLTVLPKEIRELQKLTVLYLSYNQFKTLPKEIGELQKLTVL 254


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/262 (36%), Positives = 155/262 (59%), Gaps = 2/262 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           NI+ LP S G L +L  L+L  N++  +P + G L++L+ L L+ N++  LP S G+L  
Sbjct: 281 NIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQ 340

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L+L  NQ+  LP     L  L +L L +N L  LP S G L  LKKL +  N L+ L
Sbjct: 341 LNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSL 400

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P       +L+ L ++ N L+ LP++ G ++ L VL++  N ++ LP +  +L+ LR+L 
Sbjct: 401 PELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLH 460

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +++N+L+S+P SL     L  +++ NN  +L+ LP S GNL  +  L+++NNQ   LP+S
Sbjct: 461 IAYNQLQSLPGSLTNLVNLQTLDLNNN--NLQTLPNSFGNLNQINYLNLANNQFHSLPES 518

Query: 344 FRMLSRLRVLRVQENPLEVPPR 365
           F  L++L+ L +  N +++ P 
Sbjct: 519 FGNLTKLQCLYLYNNQIQILPE 540



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 25/306 (8%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG---------------------- 136
           N + + ++ LPDS G L++L  L L  N++  +P + G                      
Sbjct: 299 NLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLANNQLQILPQFF 358

Query: 137 -GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
             L++L KL L+ N++  LP S G L  L  L +  NQ+ +LP   + L+ L+ LDL +N
Sbjct: 359 GNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNN 418

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           NL +LPDS G+L  L  L +  N L+ LPH+ G  + LR+L + YN+L++LP ++  +  
Sbjct: 419 NLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLVN 478

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ L +  NN++ LP +  +L+ +  L+++ N+  S+PES    T L  + + NN   ++
Sbjct: 479 LQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNN--QIQ 536

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
            LP +  NL  L EL ++ NQ++ LP++F  L+ LR L +  N  E  P  +  + ++  
Sbjct: 537 ILPETFSNLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPECLFHLSSECE 596

Query: 376 VQYMAD 381
           +   A+
Sbjct: 597 IYLEAN 602



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 171/366 (46%), Gaps = 79/366 (21%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +LA   ++     TR ++L  K   N+  LP S G L+ L  LDL+ N++  +P +   L
Sbjct: 116 ELAQFCKIFEIYNTRIISLAEK---NLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENL 172

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN------------------------QI 174
           ++L+ L+L  N+  E+PD +  L S   ++L+ N                        Q+
Sbjct: 173 TNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILDQLNQRVNQTNYQGPKFQV 232

Query: 175 SA---------------------LPVALSRLVRLEELD------LGSNNLSSLPDSIGSL 207
           S+                     L  AL++  R  E+       L   N+  LP S G+L
Sbjct: 233 SSPTPSFCSELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQLLPSSFGNL 292

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL-----------------------K 244
           I+L  L +  N L+ LP + G  ++L+ L +  N+L                       +
Sbjct: 293 INLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKLNLANNQLQ 352

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP+  G +  L  L +  N ++ LPT+   L+ L++L +++N+L+S+PE       L  
Sbjct: 353 ILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQT 412

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++ NN  +LR LP S GNL  L  L++SNNQ++VLP SF  L++LR L +  N L+  P
Sbjct: 413 LDLNNN--NLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLP 470

Query: 365 RNIVEM 370
            ++  +
Sbjct: 471 GSLTNL 476



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 107/187 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LPDS G L+ L  L+LS N++  +P + G L+ L+ L +  N++  LP S+ +L+
Sbjct: 418 NNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLV 477

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N +  LP +   L ++  L+L +N   SLP+S G+L  L+ L +  N ++ 
Sbjct: 478 NLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQI 537

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP T     +L EL ++YN+L+ LPE    +  L  L++  NN + +P  +  LSS  E+
Sbjct: 538 LPETFSNLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFETIPECLFHLSSECEI 597

Query: 283 DVSFNEL 289
            +  N L
Sbjct: 598 YLEANPL 604



 Score = 45.1 bits (105), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 55/104 (52%), Gaps = 3/104 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N   +    LP+S G L+ L  L L  N+I  +P T   L +L +L L+ N++  L
Sbjct: 505 LNLAN---NQFHSLPESFGNLTKLQCLYLYNNQIQILPETFSNLINLTELHLNYNQLQTL 561

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           P++  +L +L  L+L GN    +P  L  L    E+ L +N LS
Sbjct: 562 PETFTNLTNLRNLNLTGNNFETIPECLFHLSSECEIYLEANPLS 605


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  IG L +L++L L  N++  LP  IG L +L  L
Sbjct: 130 LPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  +Q++ LP  + +L  L ELDL  N L+ LP  IG L +L++ +++ N L  LP  I
Sbjct: 190 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N    LP  +  L +L+EL +S+N
Sbjct: 250 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +N+ NN   L  LP  I  L+ L+ L++S NQ++ +P     L
Sbjct: 310 QLTTFPKEIGKLQKLQTLNLWNN--QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 367

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 368 QNLKSLDLSNNQLTTLPKEIEQL 390



 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 140/251 (55%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++  +P  IG L +L+ L L+ +++  LP  IG L +L  L
Sbjct: 153 LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHEL 212

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+   L +N L+ LP  IG L +L +L +  N L  LP  I
Sbjct: 213 DLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI 272

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+   +D N+   LP+ +G++  L+ L + YN +   P  +  L  L+ L++  N
Sbjct: 273 GQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNN 332

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +N+  N   L+ +P+ IG L+ L+ LD+SNNQ+  LP     L
Sbjct: 333 QLTTLPEEIEQLKNLKTLNLSEN--QLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQL 390

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 391 KNLQTLNLWNN 401



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 135/230 (58%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L E+++  +P  IG L +L +LDL  N++  LP  IG L +L   
Sbjct: 176 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRF 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L EL LG N L+ LP  IG L +L++ +++ N    LP  I
Sbjct: 236 VLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL + YN+L   P+ +GK+  L+ L++  N +  LP  +  L +L+ L++S N
Sbjct: 296 GQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSEN 355

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L+++P+ +     L  +++ NN   L  LP+ I  L+ L+ L++ NNQ 
Sbjct: 356 QLKTIPQEIGQLQNLKSLDLSNN--QLTTLPKEIEQLKNLQTLNLWNNQF 403



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L+ LP  IG L +L++L +  N L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  ++L  LP+ +GK+  L  L + +N +  LP  +  L +L+   +  N
Sbjct: 181 GKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L ++ +G+N   L  LP+ IG L+ L+   + NNQ  +LP     L
Sbjct: 241 QLTILPKEIGKLQNLHELYLGHN--QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQL 298

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L   P+ I
Sbjct: 299 QNLQELYLSYNQLTTFPKEI 318



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 2/248 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  L L  NQ++ALP  + 
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L L +N L++LP  I  L +L+ L +  N L  LP  IGQ  +L+EL + YN+
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQ 172

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP+ +GK+  L++LS+  + +  LP  +  L +L ELD+S N+L  +P+ +     L
Sbjct: 173 LTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNL 232

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            +  + NN   L  LP+ IG L+ L EL + +NQ+ +LP     L  L+   +  N   +
Sbjct: 233 QRFVLDNN--QLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 290

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 291 LPKEIGQL 298



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 156/300 (52%), Gaps = 26/300 (8%)

Query: 97  LQN-KLMD----NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           LQN KL+D     +  LP  IG+L +L  L L  N++ A+P  IG L +LK L L+ N++
Sbjct: 68  LQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQL 127

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP  I  L +L  LDL  NQ++ LP  + +L  L+EL L  N L++LP  IG L +L+
Sbjct: 128 TTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQ 187

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  + L  LP  IG+  +L EL + +N+L  LP+ +G++  L+   +  N +  LP 
Sbjct: 188 LLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPK 247

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN--------------------- 310
            +  L +L EL +  N+L  +P+ +     L +  + NN                     
Sbjct: 248 EIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLS 307

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  L   P+ IG L+ L+ L++ NNQ+  LP+    L  L+ L + EN L+  P+ I ++
Sbjct: 308 YNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 367



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 122/215 (56%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L L   +++ LP  + +L  L+ LDLG N L++LP  IG L +L+ 
Sbjct: 37  DLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQL 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           LI+  N L  LP  IGQ  +L+ L ++ N+L  LP  + ++  L++L +  N +  LP  
Sbjct: 97  LILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL +S+N+L ++P+ +     L  +++    + L  LP+ IG L+ L ELD+
Sbjct: 157 IGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYE--SQLTILPQEIGKLQNLHELDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S+NQ+ +LP     L  L+   +  N L + P+ I
Sbjct: 215 SHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 249



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 99/184 (53%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L    L  N++  +P  IG L +L +L L  N++  LP  IG L +L   
Sbjct: 222 LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRF 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ + LP  + +L  L+EL L  N L++ P  IG L  L+ L +  N L  LP  I
Sbjct: 282 VLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+LK +P+ +G++  L+ L +  N +  LP  +  L +L+ L++  N
Sbjct: 342 EQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401

Query: 288 ELES 291
           +  S
Sbjct: 402 QFSS 405


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 87  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 144 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 204 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +N+G+N   L  LP  IG L
Sbjct: 264 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSN--QLTTLPEGIGQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 141/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P  
Sbjct: 51  LDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + Y
Sbjct: 111 IEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSY 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +    
Sbjct: 171 NQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQ 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L ++ N L
Sbjct: 231 NLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQL 288

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 289 TTFPKEIGQL 298



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 151/284 (53%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L
Sbjct: 61  LPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I
Sbjct: 121 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N
Sbjct: 181 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 240

Query: 288 ELESVPESLCFATTLVKMNIGNN----------------FADLRA-----LPRSIGNLEM 326
           +L  +P  +     L  +N+ NN                  DLR+      P+ IG L+ 
Sbjct: 241 QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKN 300

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L++ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 301 LQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 344



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 156 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 273 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLDLDSN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 333 QLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 97  LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++S+N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ LD+
Sbjct: 157 IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP     L  L+ L +  N L + P  I ++
Sbjct: 215 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQL 252


>gi|356562028|ref|XP_003549277.1| PREDICTED: leucine-rich repeat and calponin homology
           domain-containing protein 1-like [Glycine max]
          Length = 360

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 107/263 (40%), Positives = 152/263 (57%), Gaps = 3/263 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ +DL    +  LP+   +L ++  LDL  N +  +P +L+ RL+ +  LD+ SN L S
Sbjct: 37  LEIVDLSGMSLDSLPNPSLNLATICKLDLSNNNLLNIPESLTARLLNMVVLDVHSNQLRS 96

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N +E LP TI  C SL EL  ++N+L  LP+ +G ++  L+ 
Sbjct: 97  LPNSIGCLYKLKVLNVSGNLIEYLPKTIENCRSLEELNANFNKLIQLPDTIGYELKNLKK 156

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LSV  N +  LP + S L++LR LD   N L S+PE L     L  +N+  NF  L +LP
Sbjct: 157 LSVNSNKLVFLPRSTSHLTALRILDARLNCLRSLPEDLENLINLETLNVSQNFQYLDSLP 216

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S+G L  L ELD+S N+IR LPDS   L +L+ + V+ NPL  PP  +VE G  AV +Y
Sbjct: 217 YSVGFLLSLVELDVSYNKIRALPDSIGCLKKLQKISVEGNPLSSPPPELVEQGLHAVKEY 276

Query: 379 MAD-LVEKRDAKTQPVKQKKSWV 400
           +   +     + T   K+ KSWV
Sbjct: 277 LCQKMNAGHQSPTTNNKKSKSWV 299



 Score = 45.4 bits (106), Expect = 0.053,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP+ +  L +L +L++S+N   + ++P ++G L SL +LD+  N+I  LPDSIG L  L 
Sbjct: 190 LPEDLENLINLETLNVSQNFQYLDSLPYSVGFLLSLVELDVSYNKIRALPDSIGCLKKLQ 249

Query: 166 YLDLRGNQISALPVAL 181
            + + GN +S+ P  L
Sbjct: 250 KISVEGNPLSSPPPEL 265



 Score = 41.2 bits (95), Expect = 0.90,   Method: Compositional matrix adjust.
 Identities = 21/45 (46%), Positives = 31/45 (68%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           ++ LP S+G L SLV LD+S N+I A+P +IG L  L+K+ +  N
Sbjct: 212 LDSLPYSVGFLLSLVELDVSYNKIRALPDSIGCLKKLQKISVEGN 256


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L L  N+I  LP  I  L 
Sbjct: 149 NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQ 208

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 209 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 268

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+EL
Sbjct: 269 IPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQEL 328

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 329 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 386

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 387 EIGQLQNLQTLYLRNNQFSIEEK 409



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDLS+N+++ +P  I  L +L+ LDL +N++  LP  IG L +L  L
Sbjct: 62  LPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L +L+ L+L +N + ++P  I  L  L+ L +  N L  LP  I
Sbjct: 122 YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + YN++K LP+ + K+  L+ L +  N +  LP  +  L  L  L +  N
Sbjct: 182 GKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  +P+ IG+L+ L++L + +NQ+  +P     L
Sbjct: 242 QLTTLPQEIGQLQNLKVLFLNNN--QLTTIPQEIGHLQNLQDLYLVSNQLTTIPKEIGQL 299

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L + P+ I
Sbjct: 300 QNLQMLDLGNNQLTILPKEI 319



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/286 (32%), Positives = 152/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L L N   + +   P  IGKL  L  L+LS N+I  +P  I  L  L+ L
Sbjct: 111 EIGKLQNLQELYLSN---NQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 167

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L  L +L L  NQI  LP  + +L +L+ L L  N L++LP  I
Sbjct: 168 YLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 227

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L+ L ++ N L  LP  IGQ  +L+ L ++ N+L  +P+ +G +  L+ L +  N
Sbjct: 228 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVSN 287

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  +P  +  L +L+ LD+  N+L  +P+ +     L ++ + NN   L  +P+ IG L
Sbjct: 288 QLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNN--QLTTIPKEIGQL 345

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +SNNQ+  +P     L  L+ L +  N L   P+ I ++
Sbjct: 346 QNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLITIPKEIGQL 391



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 25/135 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +   +LKALP+ +G++  L++L +  N +  LP  +  L +L+ LD+  N+L   
Sbjct: 49  VRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQL--- 105

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                   LP+ IG L+ L+EL +SNNQ+   P     L +L+ 
Sbjct: 106 ----------------------TILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQW 143

Query: 353 LRVQENPLEVPPRNI 367
           L +  N ++  P+ I
Sbjct: 144 LNLSANQIKTIPKEI 158


>gi|449508231|ref|XP_004163257.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Cucumis
           sativus]
          Length = 367

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/233 (42%), Positives = 135/233 (57%), Gaps = 5/233 (2%)

Query: 170 RGNQISALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           +   + ++P +L +RL+ +  LD+ SN L  LP SIG L  LK L V  N +  LP T+ 
Sbjct: 76  KATDLESIPESLIARLLNVVVLDVHSNQLKCLPHSIGCLGKLKTLNVSGNLIASLPKTLV 135

Query: 229 QCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            C SL EL V++N+L  LP+A+G ++  L+ LSV  N +  LP ++S L++LR LD   N
Sbjct: 136 DCRSLEELNVNFNKLMKLPDALGFELTNLKKLSVNSNKLIYLPHSISHLTNLRVLDARLN 195

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P+ L     L  +N+  NF  L+ LP SIG L  L ELDIS N I  LP+S   L
Sbjct: 196 CLTSLPDDLENLIKLEVLNVSQNFHHLQTLPYSIGLLLSLVELDISYNGITTLPESIGCL 255

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
            RL  L V  NPL  PP  + E G  AV +Y++   EK +A  Q   +KKSWV
Sbjct: 256 KRLHKLCVDGNPLSSPPSLVFEQGLHAVKEYLS---EKMNAGHQNSHKKKSWV 305


>gi|410213424|gb|JAA03931.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410267242|gb|JAA21587.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410301698|gb|JAA29449.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L++S N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L+V +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 101/278 (36%), Positives = 159/278 (57%), Gaps = 2/278 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +N+  + + I  L +L  L L  N +  +   I  L +L KLDL  N++  LPDS+  L
Sbjct: 57  YNNLSCISEYIYCLINLKELYLYCNNLTILSNHITDLVNLTKLDLSHNQLTSLPDSLTHL 116

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           ++L  LDL  NQ+++LP +L+RLV L  LDL  N L+SLPDS+  L++L  L +  N L 
Sbjct: 117 VNLTKLDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLT 176

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP ++ +  +L  L +  N+L +L  ++ ++  L  L + +N +  LP +++ L +L E
Sbjct: 177 SLPDSLTRLVNLIYLYLGRNQLSSLLNSLTRLVNLTELDLSFNQLTSLPDSLTPLVNLTE 236

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+S N+L S P+SL     L ++ +  N   L +LP S+  L  L  L++S NQ+  LP
Sbjct: 237 LDLSDNQLSSFPDSLTSLVNLTELYLTGN--QLSSLPDSLTRLAKLSRLNLSRNQLSNLP 294

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           DS   L  L  L ++ NPLE PP  I + G +A+ +Y 
Sbjct: 295 DSLTRLVNLTYLYLKGNPLETPPLEIAQQGIEAIREYF 332


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 151/260 (58%), Gaps = 4/260 (1%)

Query: 102 MDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           +DN  ++ LP  IGKL  L  L L++N++  +P  I  L  L++LD   N +  LP  IG
Sbjct: 116 LDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIG 175

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  N+++ LP  + +L  L+ L LG++ L++LP+ IG L +L+KL + T  
Sbjct: 176 YLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGR 235

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP+ IG   +L+EL +  N+LK LP  +GK+  L+VL +  N +  LP     L SL
Sbjct: 236 LTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSL 295

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           REL++S N+L ++P+      +L ++N+  N   L  LP+ IG L+ L EL++S NQ+  
Sbjct: 296 RELNLSGNQLTTLPKEFGKLQSLRELNLSGN--QLTTLPKEIGKLQSLRELNLSGNQLTT 353

Query: 340 LPDSFRMLSRLRVLRVQENP 359
           LP     L  L+ L + + P
Sbjct: 354 LPKEIGHLKNLQELYLDDIP 373



 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 144/264 (54%), Gaps = 2/264 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + N E LP  IG+L +L  L LS N++ A+P  IG L  L+ L L+ N++  +P+ IG+L
Sbjct: 49  LHNNETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGEL 108

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L L  NQ+ ALP  + +L +L+ L L  N L +LP  I  L  L++L    N L 
Sbjct: 109 KKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLT 168

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG   +L EL +  N L  LP+ +GK+  L+VL +  + +  LP  +  L +L++
Sbjct: 169 TLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQK 228

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L ++   L ++P  + +   L ++ + +N   L+ LP  IG L+ L+ L +S NQ+  LP
Sbjct: 229 LYLNTGRLTTLPNDIGYLKNLQELYLSDN--QLKTLPNDIGKLKNLQVLHLSGNQLTTLP 286

Query: 342 DSFRMLSRLRVLRVQENPLEVPPR 365
             F  L  LR L +  N L   P+
Sbjct: 287 KEFGKLQSLRELNLSGNQLTTLPK 310



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IGKL  L  L L+ N++  +P  IG L  L+ L L  N++  LP  IG L 
Sbjct: 73  NQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLK 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ+  LP  +  L +L ELD  +N L++LP  IG L +L++LI+  N+L  
Sbjct: 133 KLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTT 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L+ L +  + L  LP  +G +  L+ L +    +  LP  +  L +L+EL
Sbjct: 193 LPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQEL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L+++P  +     L  +++  N   L  LP+  G L+ L EL++S NQ+  LP 
Sbjct: 253 YLSDNQLKTLPNDIGKLKNLQVLHLSGN--QLTTLPKEFGKLQSLRELNLSGNQLTTLPK 310

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            F  L  LR L +  N L   P+ I ++
Sbjct: 311 EFGKLQSLRELNLSGNQLTTLPKEIGKL 338



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 92/170 (54%), Gaps = 2/170 (1%)

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I+  ++ E LP  IG+  +L +L +  N+L+ALP+ +GK+  L+VL++  N +  +P  +
Sbjct: 46  ILSLHNNETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEI 105

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ L +  N+L+++P+ +     L  + + +N   L+ LP+ I  L+ L ELD +
Sbjct: 106 GELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDN--QLKTLPKEIEYLQKLRELDST 163

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           NN +  LP     L  L  L +  N L   P+ I ++    V+   ADL+
Sbjct: 164 NNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLL 213



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 4/87 (4%)

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            ++ E+L  AT +  +++ NN      LP+ IG L+ L +L +SNNQ++ LP     L +
Sbjct: 32  HNLTEALRNATDVRILSLHNN----ETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKK 87

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVV 376
           L+VL +  N L   P  I E+    V+
Sbjct: 88  LQVLTLNNNQLTTIPNEIGELKKLQVL 114


>gi|114623461|ref|XP_528066.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/286 (37%), Positives = 161/286 (56%), Gaps = 7/286 (2%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L++S N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 131 VSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDH 190

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 191 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELA 250

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 251 SLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 310

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD F  LSR+ 
Sbjct: 311 VPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVG 368

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 409



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 106/189 (56%), Gaps = 5/189 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L+V +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 185 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 364 PRNIVEMGA 372
           P    E+ +
Sbjct: 243 PAGFCELAS 251


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L+ N++  +P  I  L +L+ LDL  N++  LP  IG L +L  L
Sbjct: 107 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  +Q++ LP  + +L  L ELDL  N L+ LP  IG L +L++ +++ N L  LP  I
Sbjct: 167 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N    LP  +  L +L+EL +S+N
Sbjct: 227 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +N+ NN   L  LP  I  L+ L+ L++S NQ++ +P     L
Sbjct: 287 QLTTFPKEIGKLQKLQTLNLWNN--QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 344

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 345 QNLKSLDLSNNQLTTLPKEIEQL 367



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 150/284 (52%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L++LP  IG L +L+ L +  + L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N +  LP  +  L +L EL +  N
Sbjct: 181 GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHN 240

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
           +L  +P+ +     L +  + NN                     +  L   P+ IG L+ 
Sbjct: 241 QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQK 300

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L++ NNQ+  LP+    L  L+ L + EN L+  P+ I ++
Sbjct: 301 LQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 344



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 145/253 (57%), Gaps = 5/253 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L N   + +  LP  IGKL +L  L L E+++  +P  IG L +L +L
Sbjct: 133 EIRQLKNLQMLDLGN---NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHEL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  LP  IG L +L    L  NQ++ LP  + +L  L EL LG N L+ LP  I
Sbjct: 190 DLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++ +++ N    LP  IGQ  +L+EL + YN+L   P+ +GK+  L+ L++  N
Sbjct: 250 GQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L++S N+L+++P+ +     L  +++ NN   L  LP+ I  L
Sbjct: 310 QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNN--QLTTLPKEIEQL 367

Query: 325 EMLEELDISNNQI 337
           + L+ L++ NNQ 
Sbjct: 368 KNLQTLNLWNNQF 380



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 132/245 (53%), Gaps = 2/245 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  L L  NQ++ALP  + 
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L L +N L++LP  I  L +L+ L +  N L  LP  IG+  +L+ L +  ++
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQ 172

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP+ +GK+  L  L + +N +  LP  +  L +L+   +  N+L  +P+ +     L
Sbjct: 173 LTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNL 232

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            ++ +G+N   L  LP+ IG L+ L+   + NNQ  +LP     L  L+ L +  N L  
Sbjct: 233 HELYLGHN--QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTT 290

Query: 363 PPRNI 367
            P+ I
Sbjct: 291 FPKEI 295



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 2/225 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L   ++  LP  I  L +L  LDL  NQ++ALP  + +L  L+ L L  N L++LP  IG
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L  LP  I Q  +L+ L +  N+L  LP+ +GK+  L++LS+  + 
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQ 172

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L ELD+S N+L  +P+ +     L +  + NN   L  LP+ IG L+
Sbjct: 173 LTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN--QLTILPKEIGKLQ 230

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L EL + +NQ+ +LP     L  L+   +  N   + P+ I ++
Sbjct: 231 NLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQL 275



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/184 (34%), Positives = 99/184 (53%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L    L  N++  +P  IG L +L +L L  N++  LP  IG L +L   
Sbjct: 199 LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRF 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ + LP  + +L  L+EL L  N L++ P  IG L  L+ L +  N L  LP  I
Sbjct: 259 VLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+LK +P+ +G++  L+ L +  N +  LP  +  L +L+ L++  N
Sbjct: 319 EQLKNLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 378

Query: 288 ELES 291
           +  S
Sbjct: 379 QFSS 382



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R L +   +L  LP+ + ++  L++L + +N +  LP  +  L +L+ L + +N+L ++P
Sbjct: 49  RVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALP 108

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + +     L  + + NN   L  LP  I  L+ L+ LD+ NNQ+  LP     L  L++L
Sbjct: 109 KEIGQLKNLKVLFLNNN--QLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLL 166

Query: 354 RVQENPLEVPPRNI 367
            + E+ L + P+ I
Sbjct: 167 SLYESQLTILPQEI 180


>gi|357408264|ref|YP_004920187.1| hypothetical protein SCAT_p0896 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|386352737|ref|YP_006050984.1| hypothetical protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|337763213|emb|CCB71921.1| Leucine Rich Repeat (LRR)-containing protein [Streptomyces cattleya
           NRRL 8057 = DSM 46488]
 gi|365810816|gb|AEW99031.1| hypothetical protein SCATT_p08380 [Streptomyces cattleya NRRL 8057
           = DSM 46488]
          Length = 320

 Score =  152 bits (385), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 90/297 (30%), Positives = 165/297 (55%), Gaps = 14/297 (4%)

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
            W P  + ++++L  +DL  N +  +PA +  L +L  L L+AN++  +PD++GD  +L 
Sbjct: 26  RW-PTGLARMTALRRIDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPALR 84

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +L L GN+++ +P +L RL  L  L+L  N L++LP  +G L  L+ L +  N L  +P 
Sbjct: 85  HLSLGGNRLTRVPDSLCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPD 144

Query: 226 TIGQCSSLRE-LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +G   +L + L +  N   ++P ++G++  L+ L++ +N++  LP T+  +++LREL +
Sbjct: 145 ALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELRL 204

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L ++P +L   T L ++++ +N   L  LP ++G+L  L  LD+ NN +R LPD+ 
Sbjct: 205 YDNHLATLPSTLGRLTRLRELHLADNH--LTVLPHTLGDLHDLRHLDLRNNPLRHLPDTL 262

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
             L RLR L ++   L   P  +  + +          +EK D +   + Q   W++
Sbjct: 263 GTLHRLRHLDLRATHLRHLPDTLATLPS----------LEKLDLRWTKLDQLPPWIQ 309



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 106/184 (57%), Gaps = 1/184 (0%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVS-LDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           DL + +   + +  +PD++G L +L   L LS+N   +VPA++G L+ L  L+L  N + 
Sbjct: 128 DLRMLDLGHNRLHHIPDALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLT 187

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LPD++GD+ +L  L L  N ++ LP  L RL RL EL L  N+L+ LP ++G L  L+ 
Sbjct: 188 TLPDTLGDMAALRELRLYDNHLATLPSTLGRLTRLRELHLADNHLTVLPHTLGDLHDLRH 247

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP T+G    LR L +    L+ LP+ +  + +LE L +R+  + QLP  
Sbjct: 248 LDLRNNPLRHLPDTLGTLHRLRHLDLRATHLRHLPDTLATLPSLEKLDLRWTKLDQLPPW 307

Query: 273 MSSL 276
           + +L
Sbjct: 308 IQAL 311



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 45/148 (30%), Positives = 75/148 (50%), Gaps = 2/148 (1%)

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           +S +P +  +    + L+     L   P  + + ++LR + +D N L  LP  V  +  L
Sbjct: 1   MSDVPRAAPNATETRDLVRPRAGLTRWPTGLARMTALRRIDLDGNALPHLPAEVAALPAL 60

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             LS+  N +  +P  +    +LR L +  N L  VP+SLC  TTL  +N+  N   L A
Sbjct: 61  ATLSLYANQLTHVPDALGDAPALRHLSLGGNRLTRVPDSLCRLTTLRSLNLAENL--LTA 118

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSF 344
           LP  +G+L  L  LD+ +N++  +PD+ 
Sbjct: 119 LPPRLGDLTDLRMLDLGHNRLHHIPDAL 146



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 97/191 (50%), Gaps = 22/191 (11%)

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L+  P  +  + +L+++ ++ N L  LP  +    +L  L +  N+L  +P+A+G    
Sbjct: 23  GLTRWPTGLARMTALRRIDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPA 82

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN----- 310
           L  LS+  N + ++P ++  L++LR L+++ N L ++P  L   T L  +++G+N     
Sbjct: 83  LRHLSLGGNRLTRVPDSLCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHI 142

Query: 311 ---FADL--------------RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                DL               ++P S+G L  L+ L++++N +  LPD+   ++ LR L
Sbjct: 143 PDALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALREL 202

Query: 354 RVQENPLEVPP 364
           R+ +N L   P
Sbjct: 203 RLYDNHLATLP 213


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L+L  N+I  LP  I  L 
Sbjct: 99  NQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQ 158

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N L++LP  IG L +LK L +  N L  
Sbjct: 159 KLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTT 218

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG   +L++L +  N+L  +P+ +G++  L++L +  N +  LP  +  L +L+ L
Sbjct: 219 LPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWL 278

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++ + NN   L  +P+ IG L+ L+EL +SNNQ+  +P 
Sbjct: 279 YLSNNQLTTIPKEIGQLQNLQELYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLITIPK 336

Query: 343 SFRMLSRLRVLRVQENPLEVPPR 365
               L  L+ L ++ N   +  +
Sbjct: 337 EIGQLQNLQTLYLRNNQFSIEEK 359



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L LS N++   P  IG L  L+ L+L AN+I  +P  I  L  L  L
Sbjct: 58  LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L+L  N + +LP  I  L  L+ L +  N L  LP  I
Sbjct: 118 YLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEI 177

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L +D N+L  LP+ +G++  L+VL +  N +  LP  +  L +L++L +  N
Sbjct: 178 EKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSN 237

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++GNN   L  LP+ IG L+ L+ L +SNNQ+  +P     L
Sbjct: 238 QLTTIPKEIGQLQNLQMLDLGNN--QLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQL 295

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 296 QNLQELYLSNNQLTTIPKEIGQL 318



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 142/262 (54%), Gaps = 2/262 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IGKL  L  L+LS N+I  +P  I  L  L+ L L  N++  LP  IG L  L +L+
Sbjct: 82  PKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLN 141

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQI  LP  + +L +L+ L L  N L++LP  I  L  L+ L ++ N L  LP  IG
Sbjct: 142 LSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIG 201

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+ L ++ N+L  LP+ +G +  L+ L +  N +  +P  +  L +L+ LD+  N+
Sbjct: 202 QLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQ 261

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L  +P+ +     L  + + NN   L  +P+ IG L+ L+EL +SNNQ+  +P     L 
Sbjct: 262 LTILPKEIGKLQNLQWLYLSNN--QLTTIPKEIGQLQNLQELYLSNNQLTTIPKEIGQLQ 319

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
            L+ L +  N L   P+ I ++
Sbjct: 320 NLQELYLSNNQLITIPKEIGQL 341



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 151/272 (55%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDLS+N+I+ +P  I  L +L+ LDL +N++  LP  IG L +L  L
Sbjct: 12  LPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQEL 71

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L +L+ L+L +N + ++P  I  L  L+ L +  N L  LP  I
Sbjct: 72  YLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 131

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + YN++K LP+ + K+  L+ L +  N +  LP  +  L  L  L +  N
Sbjct: 132 GKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNN 191

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + + NN   L  LP+ IG+L+ L++L + +NQ+  +P     L
Sbjct: 192 QLTTLPQEIGQLQNLKVLFLNNN--QLTTLPQEIGHLQNLQDLYLVSNQLTTIPKEIGQL 249

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L++L +  N L + P+   E+G    +Q++
Sbjct: 250 QNLQMLDLGNNQLTILPK---EIGKLQNLQWL 278



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 142/250 (56%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS+N+++ +P  I  L +L+ LDL  N+II LP  I  L +L  LDLR NQ++ LP  
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKE 61

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL L +N L++ P  IG L  L+ L +  N ++ +P  I +   L+ L +  
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPN 121

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +GK+  L+ L++ YN IK LP  +  L  L+ L +  N+L ++P+ +    
Sbjct: 122 NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQ 181

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + NN   L  LP+ IG L+ L+ L ++NNQ+  LP     L  L+ L +  N L
Sbjct: 182 KLESLGLDNN--QLTTLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVSNQL 239

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 240 TTIPKEIGQL 249


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 94/263 (35%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L+ LP  IG L +L++L +  N L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  ++L  LP+ +GK+  L++LS+  + +  LP  +  L +L ELD+S N
Sbjct: 181 GKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  + +  N   L  LP+ IG L+ L+ L++S NQI+ +P     L
Sbjct: 241 QLTILPKEIGQLQKLQWLYLPKN--QLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKL 298

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 299 QKLQSLYLPNNQLTTLPQEIGQL 321



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 142/253 (56%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  LDLS N++  +P  IG L  L+ L L  N++  LP  IG L +L  L
Sbjct: 222 LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQI  +P  + +L +L+ L L +N L++LP  IG L +L+ L + TN L  LP  I
Sbjct: 282 NLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L++L +  N+L  LP  +G++  L+ L++R N +  L   +  L +L+ LD+  N
Sbjct: 342 GHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN 401

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L   P+ +     L  +++G+N   L  LP  IG L+ L+ LD+ +NQ+  LP     L
Sbjct: 402 QLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 459

Query: 348 SRLRVLRVQENPL 360
             L+ L +  N L
Sbjct: 460 QNLQELFLNNNQL 472



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 156/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L N   + +  LP  IG+L +L  L LS N++  +P  IG L +L+ L
Sbjct: 133 EIRQLKNLQMLDLGN---NQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ +++  LP  IG L +L  L L  +Q++ LP  + +L  L ELDL  N L+ LP  I
Sbjct: 190 SLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  LP  IGQ  +L+ L + YN++K +P+ + K+  L+ L +  N
Sbjct: 250 GQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+S N L ++P+ +     L  + + +N   L  LP  IG L
Sbjct: 310 QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN--QLTILPNEIGQL 367

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L++ NN++  L      L  L+ L ++ N L + P+ I ++
Sbjct: 368 KNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQL 413



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 151/268 (56%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L  L L+ N++  +P  I  L +L+ LDL  N++  LP  IG L 
Sbjct: 102 NQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQ 161

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ LP  + +L  L+ L L  + L++LP  IG L +L+ L +  + L  
Sbjct: 162 NLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTI 221

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L EL + +N+L  LP+ +G++  L+ L +  N +  LP  +  L +L+ L
Sbjct: 222 LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 281

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S+N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ LD+S N++  LP 
Sbjct: 282 NLSYNQIKTIPKEIEKLQKLQSLYLPNN--QLTTLPQEIGQLQNLQSLDLSTNRLTTLPQ 339

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L + P  I ++
Sbjct: 340 EIGHLQNLQDLYLVSNQLTILPNEIGQL 367



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 142/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L L E+++  +P  IG L +L +LDL  N++  LP  IG L  L +L
Sbjct: 199 LPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L+L  N + ++P  I  L  L+ L +  N L  LP  I
Sbjct: 259 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  NRL  LP+ +G +  L+ L +  N +  LP  +  L +L+ L++  N
Sbjct: 319 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 378

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++ + +     L  +++ +N   L   P+ IG L+ L+ LD+ +NQ+  LP+    L
Sbjct: 379 RLTTLSKEIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 436

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 437 KNLQTLDLDSNQLTTLPQEIGQL 459



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 138/245 (56%), Gaps = 2/245 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  I  L +LK LDL  N++  LP  IG L +L  L L  NQ++ALP  + 
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L L +N L++LP  I  L +L+ L +  N L  LP  IGQ  +L+EL + YN+
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQ 172

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LP+ +GK+  L++LS+  + +  LP  +  L +L+ L +  ++L  +P+ +     L
Sbjct: 173 LTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNL 232

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            ++++ +N   L  LP+ IG L+ L+ L +  NQ+  LP     L  L+ L +  N ++ 
Sbjct: 233 HELDLSHN--QLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKT 290

Query: 363 PPRNI 367
            P+ I
Sbjct: 291 IPKEI 295



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 271 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQNLQSL 327

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 328 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 387

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 388 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 447

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 448 QLTTLPQEIGQLQNLQELFLNNNQLSS 474



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 2/225 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L   ++  LP  I  L +L  LDL  NQ++ALP  + +L  L+ L L  N L++LP  IG
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L  LP  I Q  +L+ L +  N+L  LP+ +G++  L+ L + YN 
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQ 172

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L+ L +  ++L ++P+ +     L  +++    + L  LP+ IG L+
Sbjct: 173 LTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYE--SQLTILPQEIGKLQ 230

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L ELD+S+NQ+ +LP     L +L+ L + +N L   P+ I ++
Sbjct: 231 NLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQL 275



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 70/134 (52%), Gaps = 2/134 (1%)

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R L +   +L  LP+ + ++  L++L + +N +  LP  +  L +L+ L + +N+L ++P
Sbjct: 49  RVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALP 108

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + +     L  + + NN   L  LP  I  L+ L+ LD+ NNQ+ +LP     L  L+ L
Sbjct: 109 KEIGQLKNLKVLFLNNN--QLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQEL 166

Query: 354 RVQENPLEVPPRNI 367
            +  N L   P+ I
Sbjct: 167 YLSYNQLTTLPKEI 180


>gi|297798998|ref|XP_002867383.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313219|gb|EFH43642.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 369

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/262 (41%), Positives = 149/262 (56%), Gaps = 6/262 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ ++L    +  LP+   +L ++  LDL  N I  +P +L+ RL+ L  LD+ SN + +
Sbjct: 51  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 110

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N L  LP TI  C SL EL  ++N L  LP+ +G ++  L  
Sbjct: 111 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLELTNLRK 170

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L V  N +  LPTT++ L+SLR LD   N L  +PE L     L  +N+  NF  L ALP
Sbjct: 171 LCVNSNKLISLPTTITYLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQYLSALP 230

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELDIS N+I VLP+S   + RLR L  + NPL  PP  +VE   QAV +Y
Sbjct: 231 SSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLQAVREY 290

Query: 379 MADLVEKRDAK-TQPVKQKKSW 399
           ++   +K + K      +KK+W
Sbjct: 291 LS---QKMNGKLVNSAAKKKTW 309



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + I+ LP+SIG LS L  L++S N +V++P TI    SL++L+ + N +I LPD+IG +L
Sbjct: 106 NQIKALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLEL 165

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N++ +LP  ++ L  L  LD   N L  LP+ + +LI+L+ L V  N   
Sbjct: 166 TNLRKLCVNSNKLISLPTTITYLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQY 225

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--SSLS 277
           L  LP +IG   +L EL + YN++  LPE++G +  L  LS   N +   P  +   SL 
Sbjct: 226 LSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLQ 285

Query: 278 SLRE 281
           ++RE
Sbjct: 286 AVRE 289


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/253 (34%), Positives = 154/253 (60%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SI +L +L  LDLS N++  VP +I  L +L KL+L  N++ ++P+SI  L++L  L
Sbjct: 37  VPESISQLVNLTQLDLSHNQLTQVPESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKL 96

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++ +  ++S+LV L +L L  N L+  P+SI  L++L +L +  N L ++P +I
Sbjct: 97  NLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESI 156

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L + YN+L  +PE++ ++  L  L +  N + Q+P ++S L +L +L++S+N
Sbjct: 157 SQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYN 216

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  V ES+     L ++++  N   L  +  SI  L  L +L +S N++  +P+S   L
Sbjct: 217 QLTQVSESISQLVNLTQLSLSGN--KLTQVSESISQLVNLTQLSLSGNKLTQVPESISQL 274

Query: 348 SRLRVLRVQENPL 360
             L  L + +N L
Sbjct: 275 VNLTQLSLSDNQL 287



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 158/263 (60%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SI +L +L  LDLS N++  VP +I  L +L +LDL  N++ ++P+SI  L++L  L
Sbjct: 14  VPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPESITQLVNLTKL 73

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ +P ++S+LV L +L+L  N L+ + +SI  L++L +L +  N L + P +I
Sbjct: 74  NLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESI 133

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L +  N+L  +PE++ ++  L  L++ YN + Q+P ++S L +L +LD+S N
Sbjct: 134 SQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVN 193

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VPES+     L ++N+   +  L  +  SI  L  L +L +S N++  + +S   L
Sbjct: 194 KLTQVPESISQLVNLTQLNLS--YNQLTQVSESISQLVNLTQLSLSGNKLTQVSESISQL 251

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L +  N L   P +I ++
Sbjct: 252 VNLTQLSLSGNKLTQVPESISQL 274



 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/258 (33%), Positives = 154/258 (59%), Gaps = 2/258 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SI +L +L  LDLS N++  VP +I  L +L +L+L  N++ ++ +SI  L++L  L
Sbjct: 175 VPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQL 234

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN+++ +  ++S+LV L +L L  N L+ +P+SI  L++L +L +  N L ++  +I
Sbjct: 235 SLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESI 294

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L +  N+L  + E++ ++  L  L +  N + Q+  ++S L +L +L++S N
Sbjct: 295 SQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSIN 354

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VPES+     L  +N+ +N   L  +P SI  L  L +LD+  N+I  +PD    L
Sbjct: 355 KLTQVPESISQLVNLTWLNLSDN--QLTQVPESISQLVNLTQLDLFGNKITEIPDWLEEL 412

Query: 348 SRLRVLRVQENPLEVPPR 365
             L+ L +++NPL + P 
Sbjct: 413 PNLKELDLRQNPLPISPE 430



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 147/243 (60%), Gaps = 2/243 (0%)

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           +  L+LS N++  VP +I  L +L +LDL  N++ ++P+SI  L++L  LDL  NQ++ +
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P ++++LV L +L+L  N L+ +P+SI  L++L KL +  N L ++  +I Q  +L +L 
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLS 120

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           +  N+L   PE++ ++  L  LS+  N + Q+P ++S L +L +L++S+N+L  VPES+ 
Sbjct: 121 LSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESIS 180

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
               L ++++  N   L  +P SI  L  L +L++S NQ+  + +S   L  L  L +  
Sbjct: 181 QLVNLTQLDLSVN--KLTQVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSG 238

Query: 358 NPL 360
           N L
Sbjct: 239 NKL 241



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 151/253 (59%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+SI +L +L  L+LS N++  V  +I  L +L +L L  N++ + P+SI  L++L  L
Sbjct: 83  VPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQL 142

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ +P ++S+LV L +L+L  N L+ +P+SI  L++L +L +  N L ++P +I
Sbjct: 143 SLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESI 202

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L + YN+L  + E++ ++  L  LS+  N + Q+  ++S L +L +L +S N
Sbjct: 203 SQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGN 262

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VPES+     L ++++ +N   L  +  SI  L  L +LD+S+NQ+  + +S   L
Sbjct: 263 KLTQVPESISQLVNLTQLSLSDN--QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQL 320

Query: 348 SRLRVLRVQENPL 360
             L  L +  N L
Sbjct: 321 VNLTQLDLSSNQL 333



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 153/261 (58%), Gaps = 2/261 (0%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +SI +L +L  L LS N++   P +I  L +L +L L  N++ ++P+SI  L++L  L+L
Sbjct: 108 ESISQLVNLTQLSLSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNL 167

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++ +P ++S+LV L +LDL  N L+ +P+SI  L++L +L +  N L ++  +I Q
Sbjct: 168 SYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLTQVSESISQ 227

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L +L +  N+L  + E++ ++  L  LS+  N + Q+P ++S L +L +L +S N+L
Sbjct: 228 LVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQL 287

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
             V ES+     L ++++ +N   L  +  SI  L  L +LD+S+NQ+  + +S   L  
Sbjct: 288 TQVSESISQLVNLTQLDLSSN--QLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVN 345

Query: 350 LRVLRVQENPLEVPPRNIVEM 370
           L  L +  N L   P +I ++
Sbjct: 346 LTQLNLSINKLTQVPESISQL 366



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 113/187 (60%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +SI +L +L  L LS N++  VP +I  L +L +L L  N++ ++ +SI  L++L  LDL
Sbjct: 246 ESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLVNLTQLDL 305

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ++ +  ++S+LV L +LDL SN L+ + +SI  L++L +L +  N L ++P +I Q
Sbjct: 306 SSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQVPESISQ 365

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L  L +  N+L  +PE++ ++  L  L +  N I ++P  +  L +L+ELD+  N L
Sbjct: 366 LVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLKELDLRQNPL 425

Query: 290 ESVPESL 296
              PE L
Sbjct: 426 PISPEIL 432



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 104/172 (60%), Gaps = 3/172 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  + +SI +L +L  LDLS N++  V  +I  L +L +LDL +N++ ++ +SI 
Sbjct: 282 LSDNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESIS 341

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L++L  L+L  N+++ +P ++S+LV L  L+L  N L+ +P+SI  L++L +L +  N 
Sbjct: 342 QLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNK 401

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR--YNNIKQL 269
           + E+P  + +  +L+EL +  N L   PE +G  +  E  S+   +N  +QL
Sbjct: 402 ITEIPDWLEELPNLKELDLRQNPLPISPEILGSPYHQEPGSIEKIFNYCRQL 453


>gi|58332470|ref|NP_001011310.1| leucine-rich repeat-containing protein 40 [Xenopus (Silurana)
           tropicalis]
 gi|82232111|sp|Q5M8G4.1|LRC40_XENTR RecName: Full=Leucine-rich repeat-containing protein 40
 gi|56789102|gb|AAH88034.1| hypothetical LOC496765 [Xenopus (Silurana) tropicalis]
          Length = 605

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/290 (34%), Positives = 169/290 (58%), Gaps = 4/290 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + I  L +LV LD+ +N+IV++P  I  L++L+KL++  N+I +LP  +  L 
Sbjct: 92  NKLQLLSEDISLLPALVVLDIHDNQIVSLPCAIKELTNLQKLNISHNKIKQLPKELQHLQ 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ NQ+  LP ++  L  LEELD+ +N L S+  S+G L  L K  + +N L  
Sbjct: 152 NLKSLLLQHNQLEELPDSIGHLSILEELDVSNNCLRSISSSVGQLTGLVKFNLSSNKLTA 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L++L    N L+ +P +V  + +LE L +R N +  LP  +  L+ L+EL
Sbjct: 212 LPTEIGKMKNLKQLDCTSNLLENVPASVAGMESLEQLYLRQNKLTYLP-ELPFLTKLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N+++++ PE L   ++L  + +   +  L+ LP  I  L  LE LD+SNN +  LP
Sbjct: 271 HVGNNQIQTLGPEHLQNLSSLSVLEL--RYNKLKVLPEEISLLNGLERLDLSNNDLGSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            +   L  L+ L+++ NPL    R+I+  G Q +++Y+   V+  D KTQ
Sbjct: 329 CTLGSLPNLKSLQLEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQ 378



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 137/319 (42%), Gaps = 49/319 (15%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+ +  LSSL  L+L  N++  +P  I  L+ L++LDL  N +  LP ++G L +L  L 
Sbjct: 282 PEHLQNLSSLSVLELRYNKLKVLPEEISLLNGLERLDLSNNDLGSLPCTLGSLPNLKSLQ 341

Query: 169 LRGNQISA----------------------------------------LP----VALSRL 184
           L GN +                                          LP    V    +
Sbjct: 342 LEGNPLRGIRRDILNKGTQELLKYLKGRVQVPDVKTQEDENSTATAMTLPSESVVNTHAI 401

Query: 185 VRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCS-SLRELRVDY 240
           V L+ L+      S +P+++ +      +  +    N L E+P  I +   S+ ++ + +
Sbjct: 402 VTLKTLEYCEKQASLIPEAVFNATGSSFITTVNFSKNQLTEVPARIVEMKDSVCDVNLGF 461

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++ ++   +  +  L  + +R N +  LP+ M +++ L+ + +SFN  +  P+ L    
Sbjct: 462 NKISSISLNLCMLLKLTHIDMRNNVLTSLPSEMEAMTRLQSVILSFNRFKHFPDVLYRIP 521

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           TL  + I +N       P  +  +  L  LD+ NN +  +P +      LR L ++ NP 
Sbjct: 522 TLETILISSNQIG-SIDPTQLIKMTKLSTLDLQNNDLLQIPPALGNCESLRALHLEGNPF 580

Query: 361 EVPPRNIVEMGAQAVVQYM 379
             P   I+  G  AV++Y+
Sbjct: 581 RNPRAAILAKGTVAVLEYL 599


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  152 bits (384), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/264 (37%), Positives = 154/264 (58%), Gaps = 5/264 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL +N +  +P  IG L+ LKKL+L   ++  LP +I  L  L  L
Sbjct: 352 LPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSL 411

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GNQ+S+LP+ +++++ L+EL+L  N LS LP  IG L +L++L +  N L+ LP  I
Sbjct: 412 DFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEI 471

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L + +N+L  LP  +G++  L+ LS+  N +  LP  +  LSSL+ L +  N
Sbjct: 472 GQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSN 531

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +     L  +N+  N   L +LP  +  L+ L ELD+ NN++R LP     L
Sbjct: 532 RLSSLPPEIGKLHNLNSLNLVEN--QLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQL 589

Query: 348 SRLRVLRVQENPLEVPPRNIVEMG 371
             L ++ + +N L   P+   EMG
Sbjct: 590 KSLGLVDLSDNQLSNLPK---EMG 610



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/276 (36%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ +    + LNL    + N   LP +I KL  L SLD S N++ ++P  I  + SLK+L
Sbjct: 378 EIGTLTHLKKLNLSKTQLTN---LPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLKEL 434

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++ +LP  IG L +L  LDLR N++ +LP  + +L  L+ L L  N L++LP  I
Sbjct: 435 NLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDI 494

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +LK L +  N L  LP  IG+ SSL+ L +  NRL +LP  +GK+H L  L++  N
Sbjct: 495 GQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVEN 554

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  M  L +LRELD+  N L ++P  +    +L  +++ +N   L  LP+ +G L
Sbjct: 555 QLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDN--QLSNLPKEMGQL 612

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
             L  L +  NQ+  LP     L     + V+ NPL
Sbjct: 613 YNLTVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPL 648



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 143/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  + +L  L SLDL+ N++  +P+++  L  L+ LDL  N +  LP  I  L 
Sbjct: 117 NQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLN 176

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LDL  NQ+S LP  + +L  L+ L LG N LSSLP +I  L +LKKL +    L+ 
Sbjct: 177 KLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKR 236

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q + L+EL +  N+L +LP  + ++  L+ L +++  +   P  +S L+ L+EL
Sbjct: 237 LPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQEL 296

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N L S+P  +  A       +  ++  LR LP  I  L  L  LD+ + Q+  LP 
Sbjct: 297 DLSGNSLSSLPREM--AKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPP 354

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L+ L + +NPL   P+ I
Sbjct: 355 EIAQLINLQSLDLYDNPLTHLPQEI 379



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 151/271 (55%), Gaps = 7/271 (2%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           D + LSL +L   +E+   K    LNL++   + +  LP  IG+L  L +LDL  NR+  
Sbjct: 44  DLQGLSLTQLP--LEIGQLKHLEVLNLRD---NQLSRLPPEIGQLIHLTTLDLCSNRLNR 98

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +PA +  L++L KL L  N++  LP  +  L  L  LDL  NQ++ LP ++++L  L+ L
Sbjct: 99  LPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTL 158

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DL +N L SLP  I  L  L++L +  N L  LP  I + ++L+ L + +N L +LP  +
Sbjct: 159 DLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATI 218

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            K+  L+ L +R  ++K+LP  +  L+ L+ELD+S N+L S+P  +     L  + +   
Sbjct: 219 AKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLK-- 276

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           F  L   P  +  L  L+ELD+S N +  LP
Sbjct: 277 FTQLSHPPAELSQLTHLQELDLSGNSLSSLP 307



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 144/269 (53%), Gaps = 2/269 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  I KL++L +L L  N + ++PATI  L++LKKLDL A  +  LP  I  L 
Sbjct: 186 NQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLT 245

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LDL  N++S+LP  +++LV L+ L L    LS  P  +  L  L++L +  N L  
Sbjct: 246 KLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSS 305

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + +   L++L + YN L+ LP  + ++ TL  L +R   +  LP  ++ L +L+ L
Sbjct: 306 LPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSL 365

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N L  +P+ +   T L K+N+      L  LP +I  L+ L+ LD S NQ+  LP 
Sbjct: 366 DLYDNPLTHLPQEIGTLTHLKKLNLSK--TQLTNLPPAIMKLKRLQSLDFSGNQLSSLPI 423

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
               +  L+ L +  N L   P +I ++ 
Sbjct: 424 EITQIISLKELNLSFNQLSKLPADIGQLN 452



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/291 (30%), Positives = 145/291 (49%), Gaps = 25/291 (8%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  I +L+ L  LDLS+N++ ++P  I  L +L+ L L   ++   P  +  L  L
Sbjct: 234 LKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHL 293

Query: 165 VYLDLRGNQISALP-----------------------VALSRLVRLEELDLGSNNLSSLP 201
             LDL GN +S+LP                         +++L  L  LDL S  L+SLP
Sbjct: 294 QELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLP 353

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
             I  LI+L+ L +  N L  LP  IG  + L++L +   +L  LP A+ K+  L+ L  
Sbjct: 354 PEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIMKLKRLQSLDF 413

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +  LP  ++ + SL+EL++SFN+L  +P  +     L ++++  N  D  +LP+ I
Sbjct: 414 SGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKLD--SLPKEI 471

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           G L  L+ L +  NQ+  LP     L  L+ L +  N L   P  I ++ +
Sbjct: 472 GQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSS 522



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 144/257 (56%), Gaps = 3/257 (1%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  + +L+ L  LDLS N + ++P  +  L  L+KLDL  N +  LP  I  L +L  LD
Sbjct: 284 PAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQKLDLSYNSLRNLPTVITQLTTLRSLD 343

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           LR  Q+++LP  +++L+ L+ LDL  N L+ LP  IG+L  LKKL +    L  LP  I 
Sbjct: 344 LRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLTHLKKLNLSKTQLTNLPPAIM 403

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           +   L+ L    N+L +LP  + +I +L+ L++ +N + +LP  +  L++L+ELD+  N+
Sbjct: 404 KLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENK 463

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L+S+P+ +     L  + +   F  L  LP  IG L+ L+ L I  N +  LP     LS
Sbjct: 464 LDSLPKEIGQLNNLKSLVL--RFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLS 521

Query: 349 RLRVLRVQENPL-EVPP 364
            L+ L ++ N L  +PP
Sbjct: 522 SLKSLILRSNRLSSLPP 538



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 144/291 (49%), Gaps = 49/291 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP  I +L++L SLDL   ++ ++P  I  L +L+ LDL+ N +  LP  IG L 
Sbjct: 324 NSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTLT 383

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L   Q++ LP A+ +L RL+ LD   N LSSLP  I  +ISLK           
Sbjct: 384 HLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQLSSLPIEITQIISLK----------- 432

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                       EL + +N+L  LP  +G+++ L+ L +R N +  LP  +  L++L+ L
Sbjct: 433 ------------ELNLSFNQLSKLPADIGQLNNLQELDLRENKLDSLPKEIGQLNNLKSL 480

Query: 283 DVSFNELESVPESLCFATTLVKMNI-GNNFAD--------------------LRALPRSI 321
            + FN+L ++P  +     L  ++I GN  +                     L +LP  I
Sbjct: 481 VLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEI 540

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI-VEMG 371
           G L  L  L++  NQ+  LP   R L  LR L ++ N L    RN+ +EMG
Sbjct: 541 GKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRL----RNLPLEMG 587



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/250 (32%), Positives = 133/250 (53%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL    +  +P  IG L  L+ L+L  N++  LP  IG L+ L  LDL  N+++ LP  
Sbjct: 43  LDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAE 102

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +++L  L +L L  N LS LP  +  L  L+ L +  N L  LP ++ Q   L+ L +  
Sbjct: 103 VTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSN 162

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N LK+LP  + +++ L  L +  N +  LP  +  L++L+ L +  N L S+P ++   T
Sbjct: 163 NWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLT 222

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+++      L+ LP  I  L  L+ELD+S+N++  LP     L  L+ LR++   L
Sbjct: 223 NLKKLDL--RATSLKRLPPEILQLTKLQELDLSDNKLSSLPPEIAQLVNLQSLRLKFTQL 280

Query: 361 EVPPRNIVEM 370
             PP  + ++
Sbjct: 281 SHPPAELSQL 290



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 130/247 (52%), Gaps = 7/247 (2%)

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           +++RI    AT        +LDL    + +LP  IG L  L  L+LR NQ+S LP  + +
Sbjct: 28  AQHRIQQALATQAS-----QLDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQ 82

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L+ L  LDL SN L+ LP  +  L +L KL +  N L  LP  + Q   L+ L +  N+L
Sbjct: 83  LIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQL 142

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             LP +V ++  L+ L +  N +K LP  ++ L+ LR LD+  N+L  +P  +     L 
Sbjct: 143 TNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQ 202

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            + +G+N   L +LP +I  L  L++LD+    ++ LP     L++L+ L + +N L   
Sbjct: 203 TLGLGHN--TLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSL 260

Query: 364 PRNIVEM 370
           P  I ++
Sbjct: 261 PPEIAQL 267



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 108/189 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IG+L++L SL L  N++  +P  IG L +LK L +H N +  LP  IG L 
Sbjct: 462 NKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLS 521

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N++S+LP  + +L  L  L+L  N LSSLP  +  L +L++L +  N L  
Sbjct: 522 SLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRN 581

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +GQ  SL  + +  N+L  LP+ +G+++ L VLS+  N +  LP  +  L    ++
Sbjct: 582 LPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQLWPSTKI 641

Query: 283 DVSFNELES 291
            V  N L S
Sbjct: 642 TVEGNPLPS 650


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/282 (34%), Positives = 155/282 (54%), Gaps = 7/282 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+ + +  +DLNL +N+L      LP  IGKL SL  L L EN++  +P  IG L SL++
Sbjct: 78  EIGNLQSLQDLNLWENELTT----LPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQE 133

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++  +P     L  L  L L  NQ++A+P  + +L  L+E+D  +N L +LP  
Sbjct: 134 LILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKE 193

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L  L+KL + +N +  LP  IG    L++L +  N++  LP+ +G +  LE L +  
Sbjct: 194 IGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEV 253

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L +  N L ++P+ +     L  +++  N   L  LP+ I N
Sbjct: 254 NQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRN--KLTTLPKEIEN 311

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           L+ LE LD+SNN +   P+    L  L+ LR++  P  +P +
Sbjct: 312 LQSLESLDLSNNPLTSFPEEIGKLQHLKWLRLENIPTLLPEK 353



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 138/247 (55%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  ++ A+P  IG L  L+KLDL  N I  LP  IG+L SL  L+L  N+++ LP  
Sbjct: 42  LHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKE 101

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L  N L++LP  IG L SL++LI+  N L  +P    Q   L+ L + +
Sbjct: 102 IGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSF 161

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L A+P+ + ++  L+ +    N +K LP  + +L  L++L +S N++  +P+ +    
Sbjct: 162 NQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 221

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+ + +N   +  LP+ IGNL+ LE L +  NQ+  LP     L  L+VL +  N L
Sbjct: 222 HLQKLYLSSN--KITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNL 279

Query: 361 EVPPRNI 367
              P+ I
Sbjct: 280 ANIPKEI 286



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  LDLS N I  +P  IG L SL+ L+L  N +  LP  IG L SL  L
Sbjct: 52  LPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+EL LG N L+++P     L  L++L +  N L  +P  I
Sbjct: 112 TLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+E+  + N+LK LP+ +G +  L+ L +  N I  LP  + +L  L++L +S N
Sbjct: 172 EQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  +P+ +     L  + +  N   L  LP+ IG L  L+ L + +N +  +P     L
Sbjct: 232 KITILPKEIGNLQKLEYLYLEVN--QLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKL 289

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L   P+ I
Sbjct: 290 QNLQTLSLDRNKLTTLPKEI 309



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 137/232 (59%), Gaps = 2/232 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ L L+A ++  LP  IG+L  L  LDL  N I+ LP  +  L  L++L+L  N L+
Sbjct: 37  TQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQEIGNLQSLQDLNLWENELT 96

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP  IG L SL++L +  N L  LP  IG+  SL+EL +  N+L  +P+   ++  L+ 
Sbjct: 97  TLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLTTIPKEFWQLQYLQR 156

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+ +N +  +P  +  L +L+E+D + N+L+++P+ +     L K+ + +N   +  LP
Sbjct: 157 LSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSN--KITILP 214

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + IGNL+ L++L +S+N+I +LP     L +L  L ++ N L   P+ I ++
Sbjct: 215 KEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQL 266



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 108/202 (53%), Gaps = 2/202 (0%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +  L       L  AL    ++  L L +  L++LP  IG+L  L+KL +  N +  LP 
Sbjct: 18  FYKLDAEDFHTLNEALQNPTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNTITVLPQ 77

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG   SL++L +  N L  LP+ +GK+ +L+ L++  N +  LP  +  L SL+EL + 
Sbjct: 78  EIGNLQSLQDLNLWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILG 137

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+       L ++++   F  L A+P+ I  L+ L+E+D +NNQ++ LP    
Sbjct: 138 KNQLTTIPKEFWQLQYLQRLSLS--FNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIG 195

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L  L+ L +  N + + P+ I
Sbjct: 196 NLQHLQKLYLSSNKITILPKEI 217


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  152 bits (383), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/267 (36%), Positives = 149/267 (55%), Gaps = 2/267 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LPDSIG L +L  L LS N++ ++P  +G L  L++L L  N+++ LP SIG+++
Sbjct: 120 NQLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMV 179

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L+ L+L  N+++ LP  + ++  L  L L  NNL S+P  IG L +L++L +  N L +
Sbjct: 180 NLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVK 239

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +    +L+EL +  NR++  PE + ++  LE L    N I  LP  +  L  LREL
Sbjct: 240 LPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLREL 299

Query: 283 DVSFNELESVPESLCFATTLVKMNIG--NNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            ++ NE E  PE +   T+L K+ +G          +P  IG L  L  L + +N  R +
Sbjct: 300 SIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNV 359

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           PDS   L  LR L +  N LE  P NI
Sbjct: 360 PDSIENLRHLRELYLDHNKLEALPDNI 386



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/288 (33%), Positives = 156/288 (54%), Gaps = 4/288 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ +    R LN+ N     +E LPD +G    L  + L    +  +PA +  L  L  L
Sbjct: 35  EIGTLPNLRYLNVSNN--HRLEDLPDEVGNAQKLAHISLIHCSLQQIPAVVLSLKGLDIL 92

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  +PD I +L  L  L L GNQ+ +LP ++  L+ L++L L  N L+SLPD +
Sbjct: 93  DLDRNKLQSIPDDISNLQVLRELWLTGNQLESLPDSIGLLMNLQKLGLSRNKLTSLPDEL 152

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L+ L++L +  N L  LP +IG+  +L  L ++ N+L  LPE +GK+ +L VL +  N
Sbjct: 153 GNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLTYLPEEMGKMESLLVLRLEGN 212

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           N++ +P  +  LS+L EL +S N+L  +PE +C    L ++ +G N   +   P  +  L
Sbjct: 213 NLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKN--RIEEFPEGLSRL 270

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             LE L  + N+I  LP     L  LR L +  N  E  P  ++++ +
Sbjct: 271 SNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTS 318



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/235 (31%), Positives = 122/235 (51%), Gaps = 27/235 (11%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + + +LP+ +GK+ SL+ L L  N + ++PA IG LS+L++L L  N++++LP+ + +L 
Sbjct: 189 NKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLE 248

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N+I   P  LSRL  LE L    N ++ LP  IG L  L++L + +N+ E+
Sbjct: 249 NLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFED 308

Query: 223 ---------------------------LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
                                      +P  IG    LR L +D N  + +P+++  +  
Sbjct: 309 FPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRH 368

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           L  L + +N ++ LP  +S L +LR LDV  N L+ +P  L   T L K N+  N
Sbjct: 369 LRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLKRLPTCLDKLTRLKKFNVEKN 423



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 121/223 (54%), Gaps = 28/223 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  +P  IG+LS+L  L LSEN++V +P  +  L +LK+L +  NRI E P+ +  L 
Sbjct: 212 NNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLS 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSN----------NLSSL------------ 200
           +L  L    N+I+ LP  + +L  L EL + SN          +L+SL            
Sbjct: 272 NLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGE 331

Query: 201 -----PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
                P+ IG+L+ L+ L +++N    +P +I     LREL +D+N+L+ALP+ +  +  
Sbjct: 332 KFTVIPEEIGTLVRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRN 391

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN-ELESVPESLC 297
           L  L V  N +K+LPT +  L+ L++ +V  N +L   P+ +C
Sbjct: 392 LRSLDVGTNRLKRLPTCLDKLTRLKKFNVEKNPQLVYPPQDVC 434



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 135/270 (50%), Gaps = 28/270 (10%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ--------- 173
           LS   +  +P  +  +  ++ L L  N +  LP  IG L +L YL++  N          
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 174 ---------------ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
                          +  +P  +  L  L+ LDL  N L S+PD I +L  L++L +  N
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            LE LP +IG   +L++L +  N+L +LP+ +G +  L  L +R N +  LP ++  + +
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVN 180

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQI 337
           L  L++  N+L  +PE +    +L+ + + GNN   LR++P  IG L  LEEL +S N++
Sbjct: 181 LLRLNLEENKLTYLPEEMGKMESLLVLRLEGNN---LRSIPAQIGQLSNLEELGLSENKL 237

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L + +N +E  P  +
Sbjct: 238 VKLPEDVCNLENLKELAMGKNRIEEFPEGL 267



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/210 (31%), Positives = 113/210 (53%), Gaps = 3/210 (1%)

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND-LEELPHTI 227
           L    +  +P  +  +  +E L L  N+L SLP  IG+L +L+ L V  N  LE+LP  +
Sbjct: 1   LSNKNLETIPQEVFEIKEIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEV 60

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  + + +  L+ +P  V  +  L++L +  N ++ +P  +S+L  LREL ++ N
Sbjct: 61  GNAQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LES+P+S+     L K+ +  N   L +LP  +GNL  L EL + +N++  LP S   +
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRN--KLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEM 178

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
             L  L ++EN L   P  + +M +  V++
Sbjct: 179 VNLLRLNLEENKLTYLPEEMGKMESLLVLR 208


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 167/286 (58%), Gaps = 20/286 (6%)

Query: 96  NLQNKLM---DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           NL N L    + ++ LPDSIG LS+L  + LS N++  +P +I  L +L  L L  N++ 
Sbjct: 140 NLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTNLSLSDNKLN 199

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+SIG+L  L  L L GNQ++ LP ++  L +L EL L  NNL+ +P+ IG+LI+L  
Sbjct: 200 ILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPECIGNLINLTS 259

Query: 213 LIV-------------ETND-LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           L +             E+ND L++LP +IG    L+   +   +L  LPE++G +  L  
Sbjct: 260 LSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESIGNLTNLRE 319

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N + +LP ++ +L+ L +L +S+N+L  +P+ +   T L ++ + NN   L  LP
Sbjct: 320 LFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENN--QLIDLP 377

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
            SIGN+  L EL +S+NQ+  LP+S   L++L  L++  N L E+P
Sbjct: 378 ESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIP 423



 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 168/309 (54%), Gaps = 41/309 (13%)

Query: 95  LNLQN-KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +NL N  L DN +  LP+SIG L+ L SL LS N++  +P +IG L  L +L L  N + 
Sbjct: 186 INLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLT 245

Query: 153 ELPDSIGDLLSLVYLDL----RG----------NQISALPVALSRLVRLEELDLGSNNLS 198
           E+P+ IG+L++L  L L    RG          + +  LP ++  L  L+   +GS  L+
Sbjct: 246 EVPECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLT 305

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP----------- 247
            LP+SIG+L +L++L +E N L ELP +IG  + L +LR+ YN+L  LP           
Sbjct: 306 KLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKR 365

Query: 248 ------------EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
                       E++G +  L  L +  N + +LP ++ +L+ L  L ++ N L  +PE+
Sbjct: 366 IILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEA 425

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +   T L +++IG+N   +  LP SIGNL  L  L +  NQI  LP+SF  L +L+ L +
Sbjct: 426 IGNLTKLTRLSIGDN--QIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYL 483

Query: 356 QENPLEVPP 364
             NP++  P
Sbjct: 484 NSNPIKYLP 492



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 106/302 (35%), Positives = 166/302 (54%), Gaps = 26/302 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLSLVY 166
           LP+SIG L+ L  L L  N++  +P +IG L++L   L L  N++ +LPDSIG+L +L  
Sbjct: 108 LPESIGNLTRLTDLYLQFNKLSDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTG 167

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           + L GNQ++ LP ++S+L+ L  L L  N L+ LP+SIG+L  L+ L +  N L +LP +
Sbjct: 168 IILSGNQLTELPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKS 227

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV--------------RYNNIKQLPTT 272
           IG    L EL +  N L  +PE +G +  L  LS+                + +K+LP +
Sbjct: 228 IGNLRKLSELSLAGNNLTEVPECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPES 287

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           + +L  L+   +   +L  +PES+   T L ++ + NN   L  LP SIGNL  L++L +
Sbjct: 288 IGNLKMLKSFSIGSTQLTKLPESIGNLTNLRELFLENN--QLIELPESIGNLTKLDDLRL 345

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
           S NQ+  LPD    L++L+ + ++ N L   P +I           M +LVE R +  Q 
Sbjct: 346 SYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESI---------GNMTNLVELRLSDNQL 396

Query: 393 VK 394
           +K
Sbjct: 397 IK 398



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/261 (34%), Positives = 136/261 (52%), Gaps = 37/261 (14%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL  LDL  N++ E+PD IG L++L  LDL  NQ++ LP ++  L RL +L L  N LS 
Sbjct: 71  SLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKLSD 130

Query: 200 L------------------------PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           L                        PDSIG+L +L  +I+  N L ELP +I +  +L  
Sbjct: 131 LPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISKLINLTN 190

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L  LPE++G +  L  L++  N + +LP ++ +L  L EL ++ N L  VPE 
Sbjct: 191 LSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNLTEVPEC 250

Query: 296 LCFATTLVKMNIGNNFAD------------LRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +     L  +++G+                L+ LP SIGNL+ML+   I + Q+  LP+S
Sbjct: 251 IGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKMLKSFSIGSTQLTKLPES 310

Query: 344 FRMLSRLRVLRVQENPL-EVP 363
              L+ LR L ++ N L E+P
Sbjct: 311 IGNLTNLRELFLENNQLIELP 331



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/198 (35%), Positives = 112/198 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIG L++L  L L  N+++ +P +IG L+ L  L L  N++I+LPD IG+L  L  +
Sbjct: 307 LPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRI 366

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP ++  +  L EL L  N L  LP+S+G+L  L+ L +  N L E+P  I
Sbjct: 367 ILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNHNRLVEIPEAI 426

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L  L +  N++  LPE++G +  L  L +  N I +LP +   L  L++L ++ N
Sbjct: 427 GNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSN 486

Query: 288 ELESVPESLCFATTLVKM 305
            ++ +P  L     + K 
Sbjct: 487 PIKYLPAELSHLIKITKF 504


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 88/235 (37%), Positives = 148/235 (62%), Gaps = 2/235 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ IG+L +L  L+L+ N+   +P  IG L +L+ L+L  N++  LP+ IG L 
Sbjct: 125 NQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ++ALP  + +L  L+ L L +N L++LP+ IG L +L+ L + +N L  
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTT 244

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L++L +DYNRL  LP+ +G++  L  LS+  N +K LP  +  L +L+ L
Sbjct: 245 LPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRL 304

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            +S+N+L+++P  +     L ++++ NN   L  LP+ IG L+ L++LD+ NN++
Sbjct: 305 HLSYNQLKTLPNEIEQLQNLQELDLRNNL--LTTLPKGIGQLKNLQKLDLRNNEL 357



 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 165/286 (57%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+L +N+   +P  +  L +LK+L
Sbjct: 64  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKEL 120

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP+ IG L +L  L+L  NQ   +P  + +L  L+ L+LG N L++LP+ I
Sbjct: 121 YLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEI 180

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  LP+ IGQ  +L+ L +  NRL  LP  +G++  L+ L +  N
Sbjct: 181 GQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSN 240

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L++L++ +N L ++P+ +     L  +++  N   L+ LP  IG L
Sbjct: 241 LLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGN--RLKTLPNEIGQL 298

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +S NQ++ LP+    L  L+ L ++ N L   P+ I ++
Sbjct: 299 KNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNNLLTTLPKGIGQL 344



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 144/271 (53%), Gaps = 21/271 (7%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQ + LP  
Sbjct: 51  LNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL LGSN L++LP+ IG L +L+ L +  N  + +P  IGQ  +L+ L + Y
Sbjct: 111 VEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGY 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L ALP  +G++  L+ L +  N +  LP  +  L +L+ L +S N L ++P  +    
Sbjct: 171 NQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQ 230

Query: 301 TLVKMNIGNN---------------------FADLRALPRSIGNLEMLEELDISNNQIRV 339
            L  + +G+N                     +  L  LP+ IG L+ L  L +  N+++ 
Sbjct: 231 NLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKT 290

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LP+    L  L+ L +  N L+  P  I ++
Sbjct: 291 LPNEIGQLKNLQRLHLSYNQLKTLPNEIEQL 321



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 120/207 (57%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  LP+ IG+L +L SL L  N++ A+P  IG L +L+ L
Sbjct: 156 EIGQLKNLQTLNLG---YNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+  LP+ IG L +L  L L  N ++ LP  + +L  L++L+L  N L +LP  I
Sbjct: 213 YLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L+ LP+ IGQ  +L+ L + YN+LK LP  + ++  L+ L +R N
Sbjct: 273 GRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDLRNN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L++LD+  NEL S
Sbjct: 333 LLTTLPKGIGQLKNLQKLDLRNNELFS 359



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 117/215 (54%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +I + L +  L+L  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N    LP  + +  +L+EL +  N+L  LP  +G++  L VL + +N  K +P  
Sbjct: 97  LNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++ +N+L ++P  +     L  + +G+N   L ALP  IG L+ L+ L +
Sbjct: 157 IGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSN--QLTALPNEIGQLQNLQSLYL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S N++  LP+    L  L+ L +  N L   P+ I
Sbjct: 215 STNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEI 249



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 74/138 (53%), Gaps = 2/138 (1%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +  NR K LP+ +GK+  L+ L++  N +  LP  +  L +LR+L++  N+   +
Sbjct: 48  VRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTIL 107

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           P+ +     L ++ +G+N   L  LP  IG L+ L  L++++NQ + +P     L  L+ 
Sbjct: 108 PKEVEKLENLKELYLGSN--QLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQT 165

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L   P  I ++
Sbjct: 166 LNLGYNQLTALPNEIGQL 183


>gi|410904062|ref|XP_003965512.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Takifugu rubripes]
          Length = 1024

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 152/281 (54%), Gaps = 2/281 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L + +G+L  L  L +S N+I  +P  I  L  L++LD+  N + ++P     L++L  L
Sbjct: 128 LSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFNDLHDIPRFFSSLVNLRTL 187

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D   N+++  P  +  L  LEELD   N   SLP  I  L  LK L + +  +  LP T 
Sbjct: 188 DADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKFLKILWLSSLHIPILPDTF 247

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L  L +D N L ALP   G++ +L++L++  N  +  P  + S++ L EL +S N
Sbjct: 248 CQLQNLESLMLDGNNLSALPVNFGQLQSLKMLNLSSNKFESFPDVILSITGLEELYLSRN 307

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +PE +     L  + + NN  ++  LP SI +LEMLEEL +  NQI +LPD+F  L
Sbjct: 308 KLSHIPEEIGHLEKLDNLWLDNN--NITYLPDSIVDLEMLEELVLQGNQIAILPDNFGKL 365

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           SR+ + +V++NPL  PP  +   G   +  Y  +L   + A
Sbjct: 366 SRVNIWKVKDNPLIQPPYEVCMKGIPYIAAYQKELANSQLA 406


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/274 (36%), Positives = 156/274 (56%), Gaps = 4/274 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+  +DN  +  LP +I +L++L SL LS N++  + A IG L++L+ L L  N++  
Sbjct: 569 NLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSS 628

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  L L  N++S+LP  + +L  L+ L L +N LSSLP  IG L +L+ L
Sbjct: 629 LPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTL 688

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IGQ ++L+ L +D N+L +LP  +G++  L+ L +  N +  LP  +
Sbjct: 689 YLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEI 748

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L++L+ L +  N+L S+P  +   T L  + + NN   L +LP  IG L  L+ L + 
Sbjct: 749 GQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNN--QLSSLPAEIGQLTNLQSLYLD 806

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           NNQ+  LP     L+ L+ L +  N L   P  I
Sbjct: 807 NNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEI 840



 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 99/279 (35%), Positives = 160/279 (57%), Gaps = 3/279 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG+L++L SL L  N++ ++PA IG L++L+ L L  N++  LP  IG L +L  L
Sbjct: 606 LQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTL 665

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++S+LP  + +L  L+ L L +N LSSLP  IG L +L+ L ++ N L  LP  I
Sbjct: 666 YLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEI 725

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L +  N+L +LP  +G++  L+ L +  N +  LP  +  L++L+ L +  N
Sbjct: 726 GQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNN 785

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF-RM 346
           +L S+P  +   T L  + + NN   L +LP  IG L  L+ L + NNQ+  LP    R+
Sbjct: 786 QLSSLPAEIGQLTNLQSLYLDNN--QLSSLPPGIGQLTNLQTLYLDNNQLNSLPTEIGRL 843

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
            S L+ L +  NPL+  P  I    ++A++ +    +E+
Sbjct: 844 NSSLKNLLLDGNPLKSLPPEIQYQNSKAILNFYKQQLEQ 882



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 97/277 (35%), Positives = 154/277 (55%), Gaps = 4/277 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+  +DN  +  LP  IG+L++L S  L    + ++PA I  L++L+ L L +N++  
Sbjct: 546 NLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSI 605

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           L   IG L +L  L L  N++S+LP  + +L  L+ L L +N LSSLP  IG L +L+ L
Sbjct: 606 LQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTL 665

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IGQ ++L+ L +  N+L +LP  +G++  L+ L +  N +  LP  +
Sbjct: 666 YLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEI 725

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L++L+ L +  N+L S+P  +   T L  + + NN   L +LP  IG L  L+ L + 
Sbjct: 726 GQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNN--QLSSLPAEIGQLTNLQSLYLD 783

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NNQ+  LP     L+ L+ L +  N L   P  I ++
Sbjct: 784 NNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQL 820



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/293 (33%), Positives = 155/293 (52%), Gaps = 6/293 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL+SL  E+      +   L N L+ +   LP  IG+L++L S  L    + ++PA IG 
Sbjct: 510 KLSSLPAEIGQLTNLQSFYLYNTLLSS---LPAEIGQLTNLQSFYLDNTLLSSLPAEIGQ 566

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L++L+   L    +  LP +I  L +L  L L  NQ+S L   + +L  L+ L L +N L
Sbjct: 567 LTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKL 626

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           SSLP  IG L +L+ L +  N L  LP  IGQ ++L+ L +  N+L +LP  +G++  L+
Sbjct: 627 SSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQ 686

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +  LP  +  L++L+ L +  N+L S+P  +   T L  + + NN   L +L
Sbjct: 687 TLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNN--KLSSL 744

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P  IG L  L+ L + NNQ+  LP     L+ L+ L +  N L   P  I ++
Sbjct: 745 PAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQL 797



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L++L SL L  N++ ++PA IG L++L+ L L  N++  LP  IG L +L  L
Sbjct: 422 LPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTL 481

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+S+LP  + +L  L+ L L +N LSSLP  IG L +L+   +    L  LP  I
Sbjct: 482 YLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEI 541

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+   +D   L +LP  +G++  L+   +    +  LP  +  L++L+ L +S N
Sbjct: 542 GQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSN 601

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +   +   T L  + + NN   L +LP  IG L  L+ L + NN++  LP     L
Sbjct: 602 QLSILQAEIGQLTNLQSLYLFNN--KLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQL 659

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  N L   P  I ++
Sbjct: 660 TNLQTLYLFNNKLSSLPAEIGQL 682



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 150/277 (54%), Gaps = 4/277 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ   +DN  +  LP  IG+L++L SL L  N++ ++PA IG L++L+   L+   +  
Sbjct: 477 NLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSS 536

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L    L    +S+LP  + +L  L+   L +  LSSLP +I  L +L+ L
Sbjct: 537 LPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSL 596

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + +N L  L   IGQ ++L+ L +  N+L +LP  +G++  L+ L +  N +  LP  +
Sbjct: 597 YLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEI 656

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L++L+ L +  N+L S+P  +   T L  + + NN   L +LP  IG L  L+ L + 
Sbjct: 657 GQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNN--KLSSLPAEIGQLTNLQTLYLD 714

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NNQ+  LP     L+ L+ L +  N L   P  I ++
Sbjct: 715 NNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQL 751



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 159/302 (52%), Gaps = 9/302 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L++L +L L  N++ ++PA IG L++L+ L L  N++  LP  IG L +L  L
Sbjct: 629 LPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTL 688

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++S+LP  + +L  L+ L L +N LSSLP  IG L +L+ L +  N L  LP  I
Sbjct: 689 YLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEI 748

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ ++L+ L +  N+L +LP  +G++  L+ L +  N +  LP  +  L++L+ L +  N
Sbjct: 749 GQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLDNN 808

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN-NQIRVLPDSFRM 346
           +L S+P  +   T L  + + NN   L +LP  IG L    +  + + N ++ LP   + 
Sbjct: 809 QLSSLPPGIGQLTNLQTLYLDNN--QLNSLPTEIGRLNSSLKNLLLDGNPLKSLPPEIQY 866

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMG------AQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
            +   +L   +  LE    N+ E          A    +A  +E  + K  P ++    +
Sbjct: 867 QNSKAILNFYKQQLEQTIDNLYEAKFLIIGEGGAGKTSLAKKIEDENYKLNPNEESTQGI 926

Query: 401 EM 402
           ++
Sbjct: 927 DV 928



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 134/256 (52%), Gaps = 2/256 (0%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L  +  LDLS N++ A+P  IG L++L+ L L  N++  LP  IG L +L  L L  N++
Sbjct: 406 LEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKL 465

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           S+LP  + +L  L+ L L +N LSSLP  IG L +L+ L +  N L  LP  IGQ ++L+
Sbjct: 466 SSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQ 525

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
              +    L +LP  +G++  L+   +    +  LP  +  L++L+   +    L S+P 
Sbjct: 526 SFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPA 585

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           ++   T L  + + +N   L  L   IG L  L+ L + NN++  LP     L+ L+ L 
Sbjct: 586 NIFQLTNLQSLYLSSN--QLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLY 643

Query: 355 VQENPLEVPPRNIVEM 370
           +  N L   P  I ++
Sbjct: 644 LFNNKLSSLPAEIGQL 659



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/192 (31%), Positives = 99/192 (51%), Gaps = 2/192 (1%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           +A   L  + ELDL +N L++LP  IG L +L+ L ++ N L  LP  IGQ ++L+ L +
Sbjct: 401 IAPQSLEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYL 460

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N+L +LP  +G++  L+ L +  N +  LP  +  L++L+ L +  N+L S+P  +  
Sbjct: 461 FNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQ 520

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            T L    + N    L +LP  IG L  L+   + N  +  LP     L+ L+   +   
Sbjct: 521 LTNLQSFYLYNTL--LSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNT 578

Query: 359 PLEVPPRNIVEM 370
            L   P NI ++
Sbjct: 579 LLSSLPANIFQL 590


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  151 bits (382), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 162/299 (54%), Gaps = 9/299 (3%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 52  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 104

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + RL  L++L 
Sbjct: 105 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLG 164

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++ P  IG L +L+ L +  N L   P  IGQ  +L++L +  NRL ALP+ +G
Sbjct: 165 LYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIG 224

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +     L ++ + NN 
Sbjct: 225 QLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN- 283

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L V P+ I ++
Sbjct: 284 -RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 341



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/279 (33%), Positives = 150/279 (53%), Gaps = 6/279 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 58  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+ L +  N L   P  I
Sbjct: 118 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEI 177

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L++L +  N+L   P+ +G++  L+ L +  N +  LP  +  L +L+ LD+  N
Sbjct: 178 GRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN 237

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +N+ +N   L  LP  IG L+ L+EL + NN++ VLP     L
Sbjct: 238 QFTILPKEIGQLQNLQTLNLQDN--QLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 295

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             L++L   EN L   P+   EMG    +Q + +LV  R
Sbjct: 296 QNLQMLCSPENRLTALPK---EMGQLKNLQTL-NLVNNR 330



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L  L   ENR+ A+P  +G 
Sbjct: 261 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQ 317

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 318 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 377

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 378 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 437

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 438 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 497

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 498 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 555

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 556 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 606



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 118/206 (57%), Gaps = 5/206 (2%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +  +DL L +NKL       P  IG+L +L  L L +N++   P  IG L +L+K
Sbjct: 153 EIGRLQNLQDLGLYKNKLTT----FPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQK 208

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  NR+  LP  IG L +L  LDL+ NQ + LP  + +L  L+ L+L  N L++LP  
Sbjct: 209 LWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVE 268

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L  LP  IGQ  +L+ L    NRL ALP+ +G++  L+ L++  
Sbjct: 269 IGQLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVN 328

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNEL 289
           N +  LP  +  L +L++L++  N L
Sbjct: 329 NRLTVLPKEIGQLQNLQDLELLMNPL 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 311 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 370

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 371 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 430

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 431 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 490

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 491 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 550

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 551 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 608

Query: 356 QEN 358
           Q N
Sbjct: 609 QNN 611



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 432 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 491

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 492 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 551

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 552 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 611

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 612 QFSFEEQERI 621



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/243 (30%), Positives = 127/243 (52%), Gaps = 28/243 (11%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 34  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 93

Query: 213 L-------------IVETNDLEE----------LPHTIGQCSSLRELRVDYNRLKALPEA 249
           L             IVE   LE           LP+ IG+  +L++L +  N+L   P+ 
Sbjct: 94  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 153

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++  L+ L +  N +   P  +  L +L++L +  N+L + P+ +     L K+ +  
Sbjct: 154 IGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 213

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L ALP+ IG L+ L+ LD+ NNQ  +LP     L  L+ L +Q+N L   P   VE
Sbjct: 214 N--RLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLP---VE 268

Query: 370 MGA 372
           +G 
Sbjct: 269 IGQ 271



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 410 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 469

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 470 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 529

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 530 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 588

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 589 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 624



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 151/320 (47%), Gaps = 44/320 (13%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L L  NR+  +P  IG L +L+ L
Sbjct: 245 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQML 301

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
               NR+  LP  +G L +L  L+L  N+++ LP  + +L  L++L+L  N     P S+
Sbjct: 302 CSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSL 356

Query: 205 GSLISLKKLIVETN-DLEE---------------------------------LPHTIGQC 230
                ++KL  ++N DL E                                  P  I + 
Sbjct: 357 KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKF 416

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +LREL +       LP+ + ++  L+ L++  N +K++P+ +  L +L  L++  NELE
Sbjct: 417 RNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELE 476

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P+ +     L ++++  N   L+  P  I  L+ L++LD+S NQ    P     L  L
Sbjct: 477 RLPKEIGQLRNLQRLSLHQN--TLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 534

Query: 351 RVLRVQENPLEVPPRNIVEM 370
           + L +Q N L   P  I ++
Sbjct: 535 QTLNLQRNQLTNLPAEIEQL 554



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 449 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 508

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 509 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 568

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 569 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 613



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 77/153 (50%), Gaps = 2/153 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 27  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 86

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 87  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 144

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N++   P     L  L+ L + +N L   P+ I
Sbjct: 145 NKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEI 177



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 527 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 583

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 584 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 614


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/299 (32%), Positives = 167/299 (55%), Gaps = 9/299 (3%)

Query: 75  LSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  KL +L  E+   +  + L+L N   +  + LP  IG+L +L  L+L  N++  +P 
Sbjct: 55  LSSQKLTTLPKEIKQLQNLKSLDLAN---NQFKTLPKEIGQLQNLQELNLWNNQLTTLPK 111

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            I  L +L+ L L  N++  L   IG L +L  L L  NQ++ LP  + +L  L+ L LG
Sbjct: 112 EIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLG 171

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           +N +  +P+ I  L +L+KL ++ N ++ +P  IGQ  +L+EL +  N+LK LP+ + ++
Sbjct: 172 NNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLKTLPKEIEQL 231

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L+ L +  N +  LP  +  L +L+ LD+ +N+L ++P+ +     L ++++   +  
Sbjct: 232 KNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELSLY--YNQ 289

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L ALP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L ++ N L   P   +E+G 
Sbjct: 290 LTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTTLP---IEIGQ 345



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/232 (37%), Positives = 138/232 (59%), Gaps = 2/232 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L +L L  N+I  +P  I  L +L+KL L  N+I  +P  IG L +L  L
Sbjct: 155 LPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQEL 214

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  LP  + +L  L+ L LGSN L++LP+ I  L +L+ L +  N L  LP  I
Sbjct: 215 NLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEI 274

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL + YN+L ALP+ +G++  L+ L +R N +  LP  +  L +L+ LD+  N
Sbjct: 275 GQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNN 334

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L ++P  +     L  +++ NN   L  LP+ IG L+ L+EL ++NNQ+ +
Sbjct: 335 QLTTLPIEIGQLQNLKSLDLRNN--QLTILPKEIGQLKNLQELYLNNNQLSI 384



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 156/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL N   + +  LP  I +L +L +L L  N++  +   IG L +LK L
Sbjct: 89  EIGQLQNLQELNLWN---NQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++  LP  I  L +L  L L  NQI  +P  + +L  L++L L  N + ++P  I
Sbjct: 146 FLNNNQLTTLPKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L+ LP  I Q  +L+ L +  N+L  LP  + ++  L+ L + YN
Sbjct: 206 GQLQNLQELNLWNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+EL + +N+L ++P+ +     L  +++ NN   L  LP  IG L
Sbjct: 266 QLTTLPQEIGQLQNLQELSLYYNQLTALPKEIGQLQNLKSLDLRNN--QLTTLPIEIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ NNQ+  LP     L  L+ L ++ N L + P+ I ++
Sbjct: 324 QNLKSLDLRNNQLTTLPIEIGQLQNLKSLDLRNNQLTILPKEIGQL 369



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  I Q  +L+ L + YN+L  L + +G++  L+VL +  N +  LP  
Sbjct: 99  LNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L +  N+++ +P  +     L K+ +  ++  ++ +P+ IG L+ L+EL++
Sbjct: 159 IEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYL--DYNQIKTIPKEIGQLQNLQELNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NNQ++ LP     L  L+ L +  N L   P  I ++
Sbjct: 217 WNNQLKTLPKEIEQLKNLQTLHLGSNQLTTLPNEIEQL 254


>gi|125810355|ref|XP_001361460.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
 gi|54636635|gb|EAL26038.1| GA10197 [Drosophila pseudoobscura pseudoobscura]
          Length = 848

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 146/262 (55%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L +LDL+ N IV VP  I     L +LDL  N +  LPD++  L+
Sbjct: 73  NNLESIPQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  L++L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP+ +S+  ++  L
Sbjct: 193 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPSELSNWRNVEVL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 253 SICSNNLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 310

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML  LR L   EN L   P
Sbjct: 311 TIGMLRSLRFLFADENQLRQLP 332



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 164 LNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVSANIGKL 223

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SNNL + P S+G L SL     E+N L 
Sbjct: 224 RELQHFEANGNLLDTLPSELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLT 283

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 284 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADENQLRQLPDELCSCQQLSV 343

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L ++ N+L ++P+++     L  +N+ NN+  + ALP S+ NL  L  L +S+NQ + L
Sbjct: 344 LSMANNQLSALPQNIGNLGKLKVINVVNNY--INALPVSMLNLVNLTSLWLSDNQSQPL 400



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/247 (28%), Positives = 122/247 (49%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LD S   +   P       +L++L L   R+  LP  +     L  L +  N + ++P A
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +L+ LDL  N + ++PD I +   L +L +  N L+ LP  +    SL+EL ++ 
Sbjct: 82  IGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQELLLNE 141

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
             L+ LP   G++  L +L +R NN+  LP +M  L +L+ LD+  NE   +PE +    
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELK 201

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +L ++ I  +F  +R +  +IG L  L+  + + N +  LP        + VL +  N L
Sbjct: 202 SLRELWI--DFNQIRRVSANIGKLRELQHFEANGNLLDTLPSELSNWRNVEVLSICSNNL 259

Query: 361 EVPPRNI 367
           E  P ++
Sbjct: 260 EAFPFSV 266



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ +LP  L     L  L + SNNL S+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQSLPPQLFYCQGLRVLHVNSNNLESI 78

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+AV  + +L+ L 
Sbjct: 79  PQAIGSLRQLQNLDLNRNLIVNVPDEIKACKHLTRLDLSCNSLQRLPDAVTSLISLQELL 138

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N  +   LP  
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGN--EFTELPEV 196

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +G L+ L EL I  NQIR +  +   L  L+      N L+  P
Sbjct: 197 VGELKSLRELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLP 240


>gi|319954347|ref|YP_004165614.1| adenylate cyclase [Cellulophaga algicola DSM 14237]
 gi|319423007|gb|ADV50116.1| Adenylate cyclase [Cellulophaga algicola DSM 14237]
          Length = 606

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 157/272 (57%), Gaps = 3/272 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  +P SIG L  L +LD+S N +  +P  IG L  L+KL  + N++ +LP+ I +L  
Sbjct: 46  NLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKLVANKNKLTQLPEFILNLKE 105

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  NQIS LP  + +L +LE+L L  N LS LP S  +L++LK+L + +N + ++
Sbjct: 106 LKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSFYNLLNLKELDLTSNTITQI 165

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
              I +  SL  L++ +N LK LPE VG + +LE L +    +  LP ++  LS+L++L 
Sbjct: 166 SKDISKLQSLTVLQLQFNPLKELPEKVGNLASLETLWLNKTELSSLPHSIGKLSNLKDLS 225

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
             +N L+S+P ++     L  +++  N   + +LP  IGNL  L+ L+++ N++  +P S
Sbjct: 226 AGYNHLKSIPATITALKNLESLSLEKNL--ISSLPADIGNLTKLKRLNLNTNKLTSIPAS 283

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              L +L  L ++EN +   P  ++ MG   V
Sbjct: 284 LGNL-KLSALYLKENDITELPEAVIAMGCYDV 314



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 115/205 (56%), Gaps = 2/205 (0%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           YLDL    ++ +P ++  L+ L+ LD+ +N L+ LP+ IG+L  L+KL+   N L +LP 
Sbjct: 39  YLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKLVANKNKLTQLPE 98

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I     L++LR+D N++  LP+ + K+  LE L++R N +  LP +  +L +L+ELD++
Sbjct: 99  FILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSFYNLLNLKELDLT 158

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N +  + + +    +L  + +   F  L+ LP  +GNL  LE L ++  ++  LP S  
Sbjct: 159 SNTITQISKDISKLQSLTVLQL--QFNPLKELPEKVGNLASLETLWLNKTELSSLPHSIG 216

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            LS L+ L    N L+  P  I  +
Sbjct: 217 KLSNLKDLSAGYNHLKSIPATITAL 241



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 25/197 (12%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           +L  AL    R+E LDL S NL+ +P SIG+LI L                       + 
Sbjct: 26  SLEEALQTPERIEYLDLSSKNLTEIPSSIGALIHL-----------------------KT 62

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N L  LPE +G +  LE L    N + QLP  + +L  L++L +  N++ ++P+ 
Sbjct: 63  LDISNNLLTQLPEEIGNLKHLEKLVANKNKLTQLPEFILNLKELKDLRLDKNQISTLPKK 122

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L K+ + +N   L  LP+S  NL  L+ELD+++N I  +      L  L VL++
Sbjct: 123 IDKLAKLEKLTLRDN--RLSVLPKSFYNLLNLKELDLTSNTITQISKDISKLQSLTVLQL 180

Query: 356 QENPLEVPPRNIVEMGA 372
           Q NPL+  P  +  + +
Sbjct: 181 QFNPLKELPEKVGNLAS 197


>gi|327267576|ref|XP_003218575.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Anolis
           carolinensis]
          Length = 582

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/273 (34%), Positives = 163/273 (59%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + + KLDL  N +++LPDSIG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDSIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++  +L+EL+L +N +S+LP+ +  SL++L  L +  N  +
Sbjct: 285 SLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEGLLSSLVNLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   LR+LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLNKIPEDVSGLVSLEVLILSNNL--LRSLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 461 ESLPNEIAYLRDLQRLILTNNQLSTLPRGIGHL 493



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 98/336 (29%), Positives = 154/336 (45%), Gaps = 70/336 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +LV+L LSEN + ++P ++  L  L+ +DL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMVDLRHNKLREIPPVVYRLT 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   +  L  L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITAVEKDIKNLSLLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ + +L + +N L  LP+++G + +L+ L +RYN +  +P +++  S L EL
Sbjct: 253 LPKEIGNCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIPRSLAQCSKLDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNIISALPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNN--------FA-------------DLRALPRSIGNLEMLEELDI 332
                A  L K+N+ +N        F               L  +P  +  L  LE L +
Sbjct: 373 GIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLIL 432

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           SNN +R LP     L +LR L ++EN LE  P  I 
Sbjct: 433 SNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIA 468



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 156/332 (46%), Gaps = 79/332 (23%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD- 156
            N+L+D    LPDSIG LSSL SL L  NR+ A+P ++   S L +L+L  N I  LP+ 
Sbjct: 270 HNELLD----LPDSIGNLSSLKSLGLRYNRLSAIPRSLAQCSKLDELNLENNIISALPEG 325

Query: 157 ---SIGDLLSL--------------------VY-------------------------LD 168
              S+ +L SL                    +Y                         L+
Sbjct: 326 LLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLN 385

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           ++ NQ+++LP+       + EL+L +N L+ +P+ +  L+SL+ LI+  N L  LPH IG
Sbjct: 386 MKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRSLPHGIG 445

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               LREL ++ N+L++LP  +                       + L  L+ L ++ N+
Sbjct: 446 NLRKLRELDLEENKLESLPNEI-----------------------AYLRDLQRLILTNNQ 482

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRML 347
           L ++P  +     L  + +G NF  L  LP  IG LE LEEL +++N  +  LP    + 
Sbjct: 483 LSTLPRGIGHLINLTHLGLGENF--LTQLPEEIGTLENLEELYLNDNPHLNSLPFELALC 540

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 541 SKLSIMSIENCPLNTLPAQIVAGGPSFIIQFL 572



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 121/227 (53%), Gaps = 25/227 (11%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL    I  LP S+ +L  L  L L GN++ +LP  +  LV L  L L  N+L+SLPD
Sbjct: 104 RLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPD 163

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+ +L  L+ + +  N L E+P  + + +SL  L + +NR+ A+ + +  +  L +LS+R
Sbjct: 164 SLDNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITAVEKDIKNLSLLTMLSIR 223

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N IKQLP  +  L +L  LDV+ N+LE                          LP+ IG
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEH-------------------------LPKEIG 258

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   + +LD+ +N++  LPDS   LS L+ L ++ N L   PR++ +
Sbjct: 259 NCTQITKLDLQHNELLDLPDSIGNLSSLKSLGLRYNRLSAIPRSLAQ 305



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 109/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N + +LP  +  L +L ELDL  N L SLP+ I  L  L++LI
Sbjct: 418 PEDVSGLVSLEVLILSNNLLRSLPHGIGNLRKLRELDLEENKLESLPNEIAYLRDLQRLI 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG   +L  L +  N L  LPE +G +  LE L +  N ++  LP  +
Sbjct: 478 LTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTLENLEELYLNDNPHLNSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L ++P
Sbjct: 538 ALCSKLSIMSIENCPLNTLP 557



 Score = 46.2 bits (108), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 25/148 (16%)

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++ + + L EL +  N+L++LP  VG +  L  L++  N++  LP ++ +L  LR +
Sbjct: 115 LPSSVKELTQLTELYLYGNKLQSLPPEVGCLVNLVTLALSENSLTSLPDSLDNLKQLRMV 174

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L  +P  +   T+L  + +   F  + A+ + I NL +L               
Sbjct: 175 DLRHNKLREIPPVVYRLTSLTTLYL--RFNRITAVEKDIKNLSLL--------------- 217

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                    +L ++EN ++  P  I E+
Sbjct: 218 --------TMLSIRENKIKQLPAEIGEL 237


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  151 bits (382), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 119/355 (33%), Positives = 183/355 (51%), Gaps = 13/355 (3%)

Query: 56  NKVPIMIMCMCCVGQDGEKLSLIKLASL-IEVSSKKGTRDLNLQ--NKLMDNIEWLPDSI 112
           +K PI       + Q  + + ++KLA+  + V SKK  R  NLQ  N   + +  LP  I
Sbjct: 45  DKKPIYTSLEVALEQPND-VYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEI 103

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
           G L+ L  L LS N++  +P  IG L+ L +L + ANR+  LP  IG L SL YL +  N
Sbjct: 104 GDLTKLQKLILSNNQLEKLPPEIGKLTHLLELRVSANRLTTLPPEIGKLQSLQYLYIPNN 163

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           ++  LP  + +L +L+ L L  N L+ LP SIG L +L+ LI+  N + +LPH IGQ  +
Sbjct: 164 KLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVNQLPHEIGQLKN 223

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L    +  NRLK LP+ +  +  L+ L +  N ++QLP  ++ L  L+ LD+  N    V
Sbjct: 224 LHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLDKLQILDLQKNNFSEV 283

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           P ++   T L K+ + NN   L +L   IG L+ L+ L +  N+I  LP S   +  L+ 
Sbjct: 284 PAAITKLTNLQKLWLNNN--QLTSLNAEIGKLQNLQILYLEENKITELPTSIGSIQSLKH 341

Query: 353 LRVQENPLEVPPRNIVEMGA-QAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFS 406
           L + +N L   P+ I ++   QA+      L +   AK       K W    + +
Sbjct: 342 LSLSDNMLTSLPQEIGQLRKLQALYLRNNQLPKDEKAKI------KEWCSKAYVT 390


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 91/235 (38%), Positives = 139/235 (59%), Gaps = 3/235 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL-HANRIIELPDSIGDLLSLVY 166
            P  I K  +L  LDLSEN    +P  IG L +L++L+L   N  I+LP  IG L +L  
Sbjct: 66  FPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQEIGRLQNLER 125

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L+L GN+++ LP  + RL  L+EL+L SN L  LP  IG L +L++L +  N L  LP  
Sbjct: 126 LNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQE 185

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IGQ   L  L V++NRL  LP+ +G++  L+ L +  N++  LP  +  L   ++L +  
Sbjct: 186 IGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHE 245

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           N+L ++P+ LC    L ++ +  N   L +LP+ IG L+ L+EL +S+NQ++ LP
Sbjct: 246 NQLTTLPQGLCKLQNLERIYLHQN--RLTSLPQEIGQLQNLQELHLSSNQLKTLP 298



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 153/284 (53%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+LS NR+  +P  I  L +L++L+L +N +I+LP  IG L +L  L
Sbjct: 113 LPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQL 172

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GN+++ LP  + +L +LE L +  N L+ LP  IG L +LK+L++  N L  LP  I
Sbjct: 173 NLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEI 232

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ    ++L +  N+L  LP+ + K+  LE + +  N +  LP  +  L +L+EL +S N
Sbjct: 233 GQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSN 292

Query: 288 ELESVPESL------------CFATTLVKMNIGN---------NFADLRALPRSIGNLEM 326
           +L+++P+ +                T +   IG              L  LP+ IG L+ 
Sbjct: 293 QLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEIGQLQN 352

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + +LD+S+NQ+  LP     L +L  L +  N L   P+ I ++
Sbjct: 353 MRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFPKEIGKL 396



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 139/246 (56%), Gaps = 7/246 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L ++ NR+  +P  IG L +LK+L L+ N +  LP+ IG L     L
Sbjct: 182 LPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQL 241

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  L +L  LE + L  N L+SLP  IG L +L++L + +N L+ LP  I
Sbjct: 242 VLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEI 301

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L ++ N L ALP+ +G++  L  L+++ N +  LP  +  L ++R+LD+S N
Sbjct: 302 EKLHNLQILNLNNNELTALPKEIGQLQNLYGLNLKLNKLTILPKEIGQLQNMRDLDLSDN 361

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L  +N+  N   L + P+ IG L+ L+ L     ++R +PD     
Sbjct: 362 QLTTLPSEIGQLKKLHSLNLSGN--SLTSFPKEIGKLQNLKFL-----RLRGIPDLIPQK 414

Query: 348 SRLRVL 353
            ++R L
Sbjct: 415 EKIRKL 420



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 110/205 (53%), Gaps = 3/205 (1%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE-ELPH 225
           L+L    ++  P  + +   L+ LDL  N   +LP  IG L +L++L +  N+   +LP 
Sbjct: 56  LNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNPIDLPQ 115

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG+  +L  L +  NRL  LP+ + ++  L+ L++  N +  LP  +  L +L +L++S
Sbjct: 116 EIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRLQNLEQLNLS 175

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N L ++P+ +     L  +++ +N   L  LP+ IG L+ L+EL + +N +  LP+   
Sbjct: 176 GNRLTTLPQEIGQLKKLEWLHVNHN--RLTVLPKEIGQLQNLKELLLYDNSLTTLPEEIG 233

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L + + L + EN L   P+ + ++
Sbjct: 234 QLQKFKQLVLHENQLTTLPQGLCKL 258


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  151 bits (381), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 160/283 (56%), Gaps = 12/283 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L+ L++ D+S N +  +P+ IG    L  LDL  N +++LPDS+G+L 
Sbjct: 185 NKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLR 244

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
            L  L LR N++ A+P +L   + +EE ++ +NN+SSLP+ +  SL++L  L +  N+  
Sbjct: 245 QLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGLLSSLVNLTSLCLSRNNFN 304

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  IG   Q +++  + +++N +  +P  +  +   L  L+++ N +  LP  + S  
Sbjct: 305 SYP--IGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWM 362

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL++  N+L  +PE +   T+L  + + NN   L+ LPR IGNL+ +  LD+  N++
Sbjct: 363 SMVELNLGTNQLSKLPEDIQALTSLEVLILSNNL--LKKLPRGIGNLQKMRVLDLEENKL 420

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
             LP     L  L+ L +Q N L   PRNI  +G    +QY++
Sbjct: 421 ESLPSEIAYLCSLQRLVLQSNQLSTLPRNIGHLGT---LQYLS 460



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 101/314 (32%), Positives = 152/314 (48%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +++LP+ IG LS+L  L LSEN + ++P ++  L  +K LDL  N++ E+P+ +  L 
Sbjct: 93  NRLQYLPNEIGYLSNLQKLALSENSLTSLPVSLERLKVIKVLDLRHNKLKEIPEVVYRLT 152

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+IS +   LS L  L  L L  N +  LP  IG+L  L    V  N LE 
Sbjct: 153 SLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEH 212

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C  L  L + +N L  LP+++G +  L  L +RYN ++ +P ++ +   + E 
Sbjct: 213 LPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEF 272

Query: 283 DVSFNELESVPE----------SLC----------------FATT--------------- 301
           +V  N + S+PE          SLC                FAT                
Sbjct: 273 NVENNNISSLPEGLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINMEHNHITKIPF 332

Query: 302 --------LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                   L K+N+  N   L ALP  +G+   + EL++  NQ+  LP+  + L+ L VL
Sbjct: 333 GIFTRAKYLTKLNMKEN--QLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQALTSLEVL 390

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  PR I
Sbjct: 391 ILSNNLLKKLPRGI 404



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/295 (31%), Positives = 156/295 (52%), Gaps = 40/295 (13%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDL 146
            + N++N   +NI  LP+  G LSSLV   SL LS N   + P  IGG    +++  +++
Sbjct: 270 EEFNVEN---NNISSLPE--GLLSSLVNLTSLCLSRNNFNSYP--IGGPTQFATVYSINM 322

Query: 147 HANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
             N I ++P  I      L  L+++ NQ++ALP+ +   + + EL+LG+N LS LP+ I 
Sbjct: 323 EHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSMVELNLGTNQLSKLPEDIQ 382

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           +L SL+ LI+  N L++LP  IG    +R L ++ N+L++LP  +  + +L+ L ++ N 
Sbjct: 383 ALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLVLQSNQ 442

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L+ L V  N L S+PE                          IG LE
Sbjct: 443 LSTLPRNIGHLGTLQYLSVGENNLTSLPE-------------------------EIGTLE 477

Query: 326 MLEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            LE+L +++N  +  LP    + S L+++ ++  PL   P+ +V  G   V+QY+
Sbjct: 478 NLEQLYLNDNPNLHNLPFELALCSSLQIMSIENCPLSQLPQEVVAGGPSLVIQYL 532


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 89  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 146 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 206 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +   
Sbjct: 172 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 231

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L +  N 
Sbjct: 232 QNLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQ 289

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 290 LTTFPKEIGQL 300



 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 169/325 (52%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL+      +  
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKTLQNPLKVRTLDLS-----ANRF 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           + LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L 
Sbjct: 61  KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P 
Sbjct: 121 SLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L + 
Sbjct: 181 KIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLV 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L  +P  +     L  +N+ NN   L  L + I  L+ L+ LD+ +NQ+   P    
Sbjct: 241 SNQLTILPNEIGQLKNLQTLNLRNN--RLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+VL +  N L   P  I ++
Sbjct: 299 QLKNLQVLDLGSNQLTTLPEGIGQL 323



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 158 EIGQLKNLKSLNLS---YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 275 EQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 335 QLTTLPQEIGQLQNLQELFLNNNQLSS 361


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 92/234 (39%), Positives = 139/234 (59%), Gaps = 2/234 (0%)

Query: 101 LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
           L +++  LP +IG+L++L +  L  N++ ++P  IG LS L+ LD+ +N++  LP  IG 
Sbjct: 84  LANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQ 143

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L  L  L LR NQ+S+LP  + +L  L  LDLG N LSSLP  IG L +L+ L +  N L
Sbjct: 144 LSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRL 203

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            +LP  IGQ S L  L +  N+L  LP  +G++  L  L +  N +  LP   + L++L+
Sbjct: 204 IDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQ 263

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            LD+SFN+L S+P+ +   T L  + + NN   L +LP  IG L  L  LD+++
Sbjct: 264 RLDLSFNQLSSLPKKIGQLTNLQWLILHNN--QLSSLPSEIGQLTNLRSLDLAD 315



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 141/251 (56%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP  +G L+ L  L +  N +  +P+ IG L++L+   L  N++  LP  IG L 
Sbjct: 63  NNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLS 122

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LD+R NQ+S+LP  + +L  L+ L L SN LSSLP  I  L +L+ L +  N L  
Sbjct: 123 HLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSS 182

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  NRL  LP  +G++  LE L++  N +  LP  +  LS+LR L
Sbjct: 183 LPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSL 242

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L S+P      T L ++++  +F  L +LP+ IG L  L+ L + NNQ+  LP 
Sbjct: 243 GLGENQLSSLPNEFTQLTNLQRLDL--SFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPS 300

Query: 343 SFRMLSRLRVL 353
               L+ LR L
Sbjct: 301 EIGQLTNLRSL 311



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/306 (33%), Positives = 163/306 (53%), Gaps = 19/306 (6%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSL--------------DLS 124
           +L  +IE ++ +G  +L+L     +N+  LP  IGKL+ L  L              D+ 
Sbjct: 5   ELLKVIEQAATEGVTELDLSG---NNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDII 61

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N + A+P  +G L+ L++L + AN +  LP +IG L +L    L+ NQ+S+LP  + +L
Sbjct: 62  GNNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQL 121

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ LD+ SN LSSLP  IG L  L+ L + +N L  LP  I Q ++LR L +  N+L 
Sbjct: 122 SHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLS 181

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           +LP  +G++  L+ L +  N +  LP+ +  LS L  L++  N+L ++P  +   + L  
Sbjct: 182 SLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRS 241

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           + +G N   L +LP     L  L+ LD+S NQ+  LP     L+ L+ L +  N L   P
Sbjct: 242 LGLGEN--QLSSLPNEFTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLP 299

Query: 365 RNIVEM 370
             I ++
Sbjct: 300 SEIGQL 305


>gi|195024930|ref|XP_001985965.1| GH21104 [Drosophila grimshawi]
 gi|193901965|gb|EDW00832.1| GH21104 [Drosophila grimshawi]
          Length = 910

 Score =  151 bits (381), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 107/304 (35%), Positives = 153/304 (50%), Gaps = 25/304 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 74  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLI 133

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L++  NNL +LP S+  L+SL++L +  N+  E
Sbjct: 134 SLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTE 193

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  SLREL +D+N+++ +   +GK+  L+      N +  LP  +S+  ++  L
Sbjct: 194 LPEVIGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDALPNELSNWRNVEVL 253

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN-------- 334
            V  N LE+ P S     +LV     +N   L  LP SI  LE LEEL +S+        
Sbjct: 254 SVCSNNLEAFPFSFGMLKSLVTFKCESN--GLSELPDSISYLEQLEELVLSHNKLMRLPS 311

Query: 335 ---------------NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
                          NQ+R LPD     S+L VL V  N L   P+NI  +G   V+  +
Sbjct: 312 TIGSLVKLRFLFADDNQLRQLPDELCSCSQLSVLSVANNQLSALPQNIGHLGKLKVLNVV 371

Query: 380 ADLV 383
            + +
Sbjct: 372 NNYI 375



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 145/254 (57%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L +L  L++  N ++ +P ++  L SL++LD+  N   ELP+ IG+L SL
Sbjct: 145 LEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVIGELKSL 204

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  NQI  +   + +L  L+  +   N L +LP+ + +  +++ L V +N+LE  P
Sbjct: 205 RELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFP 264

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            + G   SL   + + N L  LP+++  +  LE L + +N + +LP+T+ SL  LR L  
Sbjct: 265 FSFGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFA 324

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L  +P+ LC  + L  +++ NN   L ALP++IG+L  L+ L++ NN I  LP S 
Sbjct: 325 DDNQLRQLPDELCSCSQLSVLSVANN--QLSALPQNIGHLGKLKVLNVVNNYINALPVSM 382

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 383 LSLVNLTSLWLSDN 396



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L SL  LD+  N    +P  IG L SL++L +  N+I  +  +IG L
Sbjct: 165 LNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVIGELKSLRELWIDFNQIRRVAPNIGKL 224

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN + ALP  LS    +E L + SNNL + P S G L SL     E+N L 
Sbjct: 225 RELQHFEANGNLLDALPNELSNWRNVEVLSVCSNNLEAFPFSFGMLKSLVTFKCESNGLS 284

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G +  L  L    N ++QLP  + S S L  
Sbjct: 285 ELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELCSCSQLSV 344

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++     L  +N+ NN+  + ALP S+ +L  L  L +S+NQ + L
Sbjct: 345 LSVANNQLSALPQNIGHLGKLKVLNVVNNY--INALPVSMLSLVNLTSLWLSDNQSQPL 401



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 130/260 (50%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+  +P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 33  FPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIGSLRQLQHL 92

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 93  DLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 152

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR L V  N L  LP+++ ++ +L+ L +  N   +LP  +  L SLREL + FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVIGELKSLRELWIDFN 212

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  V  ++     L       N  D  ALP  + N   +E L + +N +   P SF ML
Sbjct: 213 QIRRVAPNIGKLRELQHFEANGNLLD--ALPNELSNWRNVEVLSVCSNNLEAFPFSFGML 270

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L   + + N L   P +I
Sbjct: 271 KSLVTFKCESNGLSELPDSI 290



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 237 RVDYNRL---KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           ++DY+      A PE      TLE L +    ++ LP  +     LR L V+ N LES+P
Sbjct: 21  KLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIP 80

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +++     L  +++  N   +  +P  I   + L  LD+S N ++ LPD+   L  L+ L
Sbjct: 81  QAIGSLRQLQHLDLNRNL--IVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQEL 138

Query: 354 RVQENPLEVPPRNI 367
            + E  LE  P N 
Sbjct: 139 LLNETYLEFLPANF 152


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  150 bits (380), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 156/279 (55%), Gaps = 21/279 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDSIG L+ L SL + +N++  +P +IG L  L+ LD+ +N +  LP+SIG+L  L +L
Sbjct: 80  LPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSFL 139

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP  +  L  L  L L +N ++++P++IG L+ +K +++  N L  LP + 
Sbjct: 140 ILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESF 199

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L +L + YN L  LP++   +  +++L +  N + Q+P  + SL+ L ++ +  N
Sbjct: 200 GNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQDN 259

Query: 288 ELESVPESLCFAT---TLVKMN---------IG--NNFAD-------LRALPRSIGNLEM 326
           +L  +PES+C  T   +L+ MN         IG  NN  +       L ALP SIG+L  
Sbjct: 260 KLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTALPESIGDLRK 319

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           +  L + NNQ+  LP+ F+ L+ L  L ++ N L   P 
Sbjct: 320 ISILLLKNNQLTTLPEQFQYLTNLNTLTLKNNQLTTLPE 358



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 159/268 (59%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + I +L +L  L L  N+IV++P +IG L+ L+ L +  N++  LP+SIG+L+
Sbjct: 52  NQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLI 111

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LD+R N ++ LP ++  L +L  L L  NNL+ LP++I +L +L  L +  N +  
Sbjct: 112 HLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKITT 171

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  IGQ   ++ + ++ N+L +LPE+ G +  LE L + YN +  LP +  +L +++ L
Sbjct: 172 IPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKIL 231

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           +++ N L  +PE++   T L K+++ +N   L  LP S+ NL +L+ L I NNQ+  LP 
Sbjct: 232 ELNNNRLIQIPENIGSLTLLEKISLQDN--KLTMLPESMCNLTLLKSLIIMNNQLTTLPA 289

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L+ L  L ++ N L   P +I ++
Sbjct: 290 RIGKLNNLENLFLENNLLTALPESIGDL 317



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 151/264 (57%), Gaps = 2/264 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LP S+  L  L  L L  N++  +   I  L +L+ L L  N+I+ LPDSIG+L  
Sbjct: 30  NLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTK 89

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L +  N++  LP ++  L+ LE LD+ SN L+ LP+SIG L  L  LI++ N+L EL
Sbjct: 90  LRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNEL 149

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P TI   S+L  L +  N++  +PE +G++  ++ + +  N +  LP +  +L  L +L 
Sbjct: 150 PETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLF 209

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +++N L ++P+S      +  + + NN   L  +P +IG+L +LE++ + +N++ +LP+S
Sbjct: 210 LTYNMLVTLPKSFDNLINIKILELNNN--RLIQIPENIGSLTLLEKISLQDNKLTMLPES 267

Query: 344 FRMLSRLRVLRVQENPLEVPPRNI 367
              L+ L+ L +  N L   P  I
Sbjct: 268 MCNLTLLKSLIIMNNQLTTLPARI 291



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 143/255 (56%), Gaps = 2/255 (0%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           +++  L LS   +  +P ++  L  LKKL L  N++  L + I +L +L  L L+ N+I 
Sbjct: 19  TNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIV 78

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           +LP ++  L +L  L +G N L  LP+SIG+LI L+ L + +N L  LP +IG+   L  
Sbjct: 79  SLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSF 138

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +D N L  LPE +  +  L  LS+R N I  +P  +  L  ++ + ++ N+L S+PES
Sbjct: 139 LILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPES 198

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                 L K+ +  N   L  LP+S  NL  ++ L+++NN++  +P++   L+ L  + +
Sbjct: 199 FGNLVKLEKLFLTYNM--LVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISL 256

Query: 356 QENPLEVPPRNIVEM 370
           Q+N L + P ++  +
Sbjct: 257 QDNKLTMLPESMCNL 271



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 123/219 (56%), Gaps = 2/219 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP++I  LS+L +L L  N+I  +P  IG L  +K + L+ N++  LP+S G+L+
Sbjct: 144 NNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLV 203

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N +  LP +   L+ ++ L+L +N L  +P++IGSL  L+K+ ++ N L  
Sbjct: 204 KLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTM 263

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++   + L+ L +  N+L  LP  +GK++ LE L +  N +  LP ++  L  +  L
Sbjct: 264 LPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTALPESIGDLRKISIL 323

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +  N+L ++PE   + T L  + + NN   L  LP   
Sbjct: 324 LLKNNQLTTLPEQFQYLTNLNTLTLKNN--QLTTLPEQF 360



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 115/194 (59%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P++IG+L  + ++ L+ N++ ++P + G L  L+KL L  N ++ LP S  +L+++
Sbjct: 169 ITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINI 228

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  N++  +P  +  L  LE++ L  N L+ LP+S+ +L  LK LI+  N L  LP
Sbjct: 229 KILELNNNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLP 288

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+ ++L  L ++ N L ALPE++G +  + +L ++ N +  LP     L++L  L +
Sbjct: 289 ARIGKLNNLENLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQFQYLTNLNTLTL 348

Query: 285 SFNELESVPESLCF 298
             N+L ++PE   +
Sbjct: 349 KNNQLTTLPEQFQY 362



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/183 (30%), Positives = 100/183 (54%), Gaps = 2/183 (1%)

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           R   + +L L   NL++LP S+ +LI LKKL ++ N L+ L   I +  +L+ L +  N+
Sbjct: 17  RNTNVSKLVLSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNK 76

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           + +LP+++G +  L  L++  N +  LP ++ +L  L  LD+  N L  +PES+     L
Sbjct: 77  IVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKL 136

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + + +N  +L  LP +I NL  L  L + NN+I  +P++   L +++ + +  N L  
Sbjct: 137 SFLILDDN--NLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSS 194

Query: 363 PPR 365
            P 
Sbjct: 195 LPE 197


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 149/253 (58%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N++  +P  I  L  L++L+L+ N++I LP  IG L +L  L
Sbjct: 181 LPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKIL 240

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  +P  + +L  L++L+LG N L++L   IG L +LK+L +E N L  LP  I
Sbjct: 241 NLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEI 300

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N L  L   +G++  L+ L +R+N +  LP  +  L +L+ LD+  N
Sbjct: 301 GKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNN 360

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++  ++  L  LP+ IG L+ L +L++++NQ+ +LP     L
Sbjct: 361 QLTTLPKKIGKLQNLKVLDL--DYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQL 418

Query: 348 SRLRVLRVQENPL 360
            +L  L ++ NP+
Sbjct: 419 KKLNTLSLRNNPI 431



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 152/286 (53%), Gaps = 25/286 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+L+  ++  +P  IG L  L+ L L  N    LP  IG L +L  L
Sbjct: 135 LPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEIGQLQNLQIL 194

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR NQ++ LP  +  L +L+EL+L  N L +LP  IG L +LK L +E N L  +P  I
Sbjct: 195 YLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLMIIPKEI 254

Query: 228 -----------------------GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                                  G   +L+EL ++ N+L  LP+ +GK+  L++L++  N
Sbjct: 255 EQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNLKILNLCNN 314

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L++LD+ FN+L ++P+ +     L  +++ NN   L  LP+ IG L
Sbjct: 315 ELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNN--QLTTLPKKIGKL 372

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+  NQ+  LP     L  LR L +  N L + P++I ++
Sbjct: 373 QNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQL 418



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/330 (30%), Positives = 165/330 (50%), Gaps = 47/330 (14%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL     + +  LP+ IG+L +L  L L EN++  +P  IG L  L+ L
Sbjct: 69  EIGKLQNLQELNLN---YNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQIL 125

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP+ IG L +L  L+L G Q+S LP  + +L +L+ L L  N  ++LP  I
Sbjct: 126 HLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEI 185

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP  I     L+EL +++N+L  LP+ +GK+  L++L++  N
Sbjct: 186 GQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDN 245

Query: 265 NIKQLP-------------------TTMSS----LSSLRELDVSFNELESVPESLCFATT 301
            +  +P                   TT++     L +L+EL +  N+L ++P+ +     
Sbjct: 246 QLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQN 305

Query: 302 LVKMNIGNN---------------------FADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L  +N+ NN                     F  L  LP+ IG L+ L+ LD+ NNQ+  L
Sbjct: 306 LKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTL 365

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P     L  L+VL +  N L   P+ I ++
Sbjct: 366 PKKIGKLQNLKVLDLDYNQLTTLPKEIGQL 395



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 102/313 (32%), Positives = 167/313 (53%), Gaps = 7/313 (2%)

Query: 51  SIIFRNKVPIMIMCMC--CVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDN-IEW 107
           +I F+ K  I+++ +C  C  Q       I       + +    R L+L+N   DN +  
Sbjct: 8   NIRFQPKFTILLILICFSCKLQAQSNEEQIHRNLTEALQNPNEVRILDLRNN--DNELTV 65

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L+ N++  +P  IG L +L+ L L  N++  LP  IG L  L  L
Sbjct: 66  LPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEIGQLQRLQIL 125

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP  + +L  L+EL+L    LS+LP  IG L  L+ L ++ N+   LP  I
Sbjct: 126 HLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNERTTLPKEI 185

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+L  LP+ +  +  L+ L++ +N +  LP  +  L +L+ L++  N
Sbjct: 186 GQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDN 245

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L K+N+G N   L  L + IG+L+ L+EL +  NQ+  LP     L
Sbjct: 246 QLMIIPKEIEQLENLQKLNLGRN--QLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKL 303

Query: 348 SRLRVLRVQENPL 360
             L++L +  N L
Sbjct: 304 QNLKILNLCNNEL 316



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 117/208 (56%), Gaps = 5/208 (2%)

Query: 85  EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +  + LNL+ N+LM     +P  I +L +L  L+L  N++  +   IG L +LK+
Sbjct: 230 EIGKLRNLKILNLEDNQLM----IIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKE 285

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  N++  LP  IG L +L  L+L  N+++ L   + RL  L++LDL  N L++LP  
Sbjct: 286 LHLEINQLTTLPKEIGKLQNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKE 345

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +LK L +  N L  LP  IG+  +L+ L +DYN+L  LP+ +G++  L  L++ +
Sbjct: 346 IGKLQNLKVLDLYNNQLTTLPKKIGKLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNH 405

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELES 291
           N +  LP  +  L  L  L +  N + S
Sbjct: 406 NQLTILPKDIEQLKKLNTLSLRNNPIAS 433



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 22/66 (33%), Positives = 41/66 (62%)

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++ NN  +L  LP+ IG L+ L+EL+++ N++  LP+    L  L++L + EN L   P
Sbjct: 54  LDLRNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLP 113

Query: 365 RNIVEM 370
           + I ++
Sbjct: 114 KEIGQL 119


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 102/311 (32%), Positives = 167/311 (53%), Gaps = 5/311 (1%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L+ L+L  N L+ LP+ IG L +L+ L ++ N L  LP  IGQ  +L+ L +D
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLD 194

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L  LPE +G++  L++L+ + N +   P  +  LS L++L +  N+L ++PE +   
Sbjct: 195 LNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQL 254

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P     L  L+ L +  N 
Sbjct: 255 KKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQ 312

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 313 LTTLPQEIGQL 323



 Score =  149 bits (377), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 146/253 (57%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L  NR+  +P  +G L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 109 LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 168

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+++ LP  + +L  L+ L+L  N L+ LP+ IG L +L+ L  + N L   P  I
Sbjct: 169 NLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEI 228

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L++L +  N+L  LPE +G++  L+ L +  N ++ LP  +  L  L+ L +  N
Sbjct: 229 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 288

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L ++N+G  F  L  LP+ IG L+ L+EL++  NQ+  LP     L
Sbjct: 289 QITTFPKEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQL 346

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 347 QKLRKLNLYNNPI 359



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/246 (33%), Positives = 140/246 (56%), Gaps = 7/246 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +G+L +L  L+L  N++  +P  IG L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+++ LP  + +L  L+ L+   N L++ P  IG L  L+KL +  N L  LP  I
Sbjct: 192 NLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L+EL +  N L+ LP+ + ++  L+ L +  N I   P  +  L +L+EL++ FN
Sbjct: 252 GQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L ++N+   F  L  LP+ +G L+ L +L++ NN     P +   +
Sbjct: 312 QLTTLPQEIGQLQNLQELNL--EFNQLATLPKEVGQLQKLRKLNLYNN-----PIASEKI 364

Query: 348 SRLRVL 353
            R+R L
Sbjct: 365 ERIRKL 370



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 135/226 (59%), Gaps = 3/226 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   +  + LNL    ++ +  LP+ IG+L +L  L+L  N++  +P  IG L +L+ L
Sbjct: 135 EVGQLQNLQVLNLD---LNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP+ IG L +L  L+ +GNQ++  P  + +L +L++L L  N L++LP+ I
Sbjct: 192 NLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L++L +  N L  LP  I Q   L+ L ++ N++   P+ +G++  L+ L++ +N
Sbjct: 252 GQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  LP  +  L +L+EL++ FN+L ++P+ +     L K+N+ NN
Sbjct: 312 QLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNLYNN 357



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 112/190 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP+ IG+L +L  L+L  N++  +P  IG L +L+ L+   N++   P  IG L
Sbjct: 172 LNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQL 231

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L L GNQ++ LP  + +L +L+EL LG+N L +LP  I  L  L+ L +E N + 
Sbjct: 232 SKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQIT 291

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
             P  IGQ  +L+EL + +N+L  LP+ +G++  L+ L++ +N +  LP  +  L  LR+
Sbjct: 292 TFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRK 351

Query: 282 LDVSFNELES 291
           L++  N + S
Sbjct: 352 LNLYNNPIAS 361


>gi|440789611|gb|ELR10917.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 911

 Score =  150 bits (380), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/308 (34%), Positives = 161/308 (52%), Gaps = 42/308 (13%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP+ +G+L+SL  LDL  N++  +PATI  L  L KL L  NR+ +LP+ IG L+
Sbjct: 509 NSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLV 568

Query: 163 SLVYLDLRGNQISALPVALS----------------------RLVRLEELDLGSNNLSSL 200
           SL  L +R NQ+  LP  LS                      +L +L++LDL  N L++L
Sbjct: 569 SLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLTTL 628

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTI------------------GQCSSLRELRVDYNR 242
               G+L  L +L V  N LEE P TI                  G  +SLR L +  N+
Sbjct: 629 QGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEVLAPEIGNMTSLRSLYLGRNK 688

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L ALP  +G +  L  L ++ N +K +P  +S+L +L+ LD+S NE ++ P++ CF   L
Sbjct: 689 LIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFPDARCFPPAL 748

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             +N+ +N   ++ L   IG L  L++L++  NQ+  LP    +L+ L  LRV  N L  
Sbjct: 749 NSLNMSDN--QMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLTGLTELRVGYNELLT 806

Query: 363 PPRNIVEM 370
            P  I ++
Sbjct: 807 LPHEIGDI 814



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 125/220 (56%), Gaps = 1/220 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++E L   IG ++SL SL L  N+++A+PA +G L+ L++L L  NR+  +P  +  L++
Sbjct: 665 DLEVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVN 724

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L +LDL  N+    P A      L  L++  N +  L + IG+L +LK+L ++ N L+ L
Sbjct: 725 LKHLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRL 784

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  I   + L ELRV YN L  LP  +G I  ++ L + +N + +LP ++ +LS+L    
Sbjct: 785 PGEISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFV 844

Query: 284 VSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIG 322
           V+ N L  +P  +   T+L ++ + GN F +L A  R  G
Sbjct: 845 VTDNLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAVRGAG 884



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 147/279 (52%), Gaps = 12/279 (4%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
            S  G +  +L+ K    +  +P ++ ++ +L  L+L  N+I ++P  +G L+ LK L L
Sbjct: 450 GSAGGLQSYDLRRK---ELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGL 506

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           + N +  LP+ +G L SL  LDLR N+++ LP  +  LV L +L L  N L  LP+ IG 
Sbjct: 507 NENSLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGC 566

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL+ L V  N L +LP  +   ++L+ L +  N L     +V K+  L+ L ++ N +
Sbjct: 567 LVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKF-RSVEKLCQLKDLDLKQNKL 625

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             L     +L+ L  LDVS N+LE  P ++     L  +       DL  L   IGN+  
Sbjct: 626 TTLQGGWGALTDLMRLDVSQNKLEEFPVTITELPRLETL-------DLEVLAPEIGNMTS 678

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPP 364
           L  L +  N++  LP    ML+ LR L ++ N L+ +PP
Sbjct: 679 LRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPP 717



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 71/213 (33%), Positives = 99/213 (46%), Gaps = 28/213 (13%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+ +    R L L +NKL+     LP  +G L+ L  L L  NR+ A+P  +  L +LK 
Sbjct: 672 EIGNMTSLRSLYLGRNKLI----ALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKH 727

Query: 144 LDLHANRIIELPDS-----------------------IGDLLSLVYLDLRGNQISALPVA 180
           LDL  N     PD+                       IG L +L  L+L  NQ+  LP  
Sbjct: 728 LDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGE 787

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +S L  L EL +G N L +LP  IG +  +K+L +E N + ELP +IG  S+L    V  
Sbjct: 788 ISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHNKMVELPKSIGNLSALELFVVTD 847

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           N L  LP  +  + +L  L V  N    LP  +
Sbjct: 848 NLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAV 880



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 57/117 (48%), Gaps = 2/117 (1%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G    L+   +R   +  +P+ +  + +L  L++  N++ES+P  L   T L  + +  N
Sbjct: 450 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 509

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
              LR LP  +G L  L  LD+  N++  LP + + L  L  L ++ N LE  P  I
Sbjct: 510 --SLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEI 564


>gi|195430322|ref|XP_002063205.1| GK21518 [Drosophila willistoni]
 gi|194159290|gb|EDW74191.1| GK21518 [Drosophila willistoni]
          Length = 831

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD++  L+
Sbjct: 73  NNLESIPQAIGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  L++L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SL+EL +D+N+++ +   +GK+  L+      N +  LP  +S   ++  L
Sbjct: 193 LPEVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDSLPNELSQWRNVEVL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 253 SICSNNLEAFPFSVGMLKSLVTFKCESN--GLSELPDSISYLEQLEELVLSHNKLMRLPS 310

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML RLR L   +N L   P
Sbjct: 311 TIGMLKRLRFLFADDNQLRQLP 332



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 143/254 (56%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L +L  L+L  N ++ +P ++  L +L++LD+  N   ELP+ +G+L SL
Sbjct: 144 LEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSL 203

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  NQI  +   + +L  L+  +   N L SLP+ +    +++ L + +N+LE  P
Sbjct: 204 KELWIDFNQIRRVSANIGKLRELQHFEANGNLLDSLPNELSQWRNVEVLSICSNNLEAFP 263

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            ++G   SL   + + N L  LP+++  +  LE L + +N + +LP+T+  L  LR L  
Sbjct: 264 FSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGMLKRLRFLFA 323

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L  +P+ LC    L  +++ NN   L ALP++IGNL  L  L++ NN I  LP S 
Sbjct: 324 DDNQLRQLPDELCSCQQLSVLSVANN--QLSALPQNIGNLGKLRVLNVVNNYINALPVSM 381

Query: 345 RMLSRLRVLRVQEN 358
             L +L  L + +N
Sbjct: 382 LSLVQLTSLWLSDN 395



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SLK+L +  N+I  +  +IG L
Sbjct: 164 LNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLKELWIDFNQIRRVSANIGKL 223

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN + +LP  LS+   +E L + SNNL + P S+G L SL     E+N L 
Sbjct: 224 RELQHFEANGNLLDSLPNELSQWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLS 283

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G +  L  L    N ++QLP  + S   L  
Sbjct: 284 ELPDSISYLEQLEELVLSHNKLMRLPSTIGMLKRLRFLFADDNQLRQLPDELCSCQQLSV 343

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++     L  +N+ NN+  + ALP S+ +L  L  L +S+NQ + L
Sbjct: 344 LSVANNQLSALPQNIGNLGKLRVLNVVNNY--INALPVSMLSLVQLTSLWLSDNQSQPL 400



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 122/247 (49%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LD S   +   P       +L++L L   R+  LP  +     L  L +  N + ++P A
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +L+ LDL  N + ++PD I S   L  L +  N L+ LP  +    SL+EL ++ 
Sbjct: 82  IGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLISLQELLLNE 141

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
             L+ LP   G++  L +L +R NN+  LP +M  L +L+ LD+  NE   +PE +    
Sbjct: 142 TYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELK 201

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +L ++ I  +F  +R +  +IG L  L+  + + N +  LP+       + VL +  N L
Sbjct: 202 SLKELWI--DFNQIRRVSANIGKLRELQHFEANGNLLDSLPNELSQWRNVEVLSICSNNL 259

Query: 361 EVPPRNI 367
           E  P ++
Sbjct: 260 EAFPFSV 266



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 91/183 (49%), Gaps = 2/183 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LD  +  L+  P+      +L++L + T  L+ LP  +  C  LR L V+ N L+++P+A
Sbjct: 22  LDYSNTPLTDFPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQA 81

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G +  L+ L +  N I  +P  + S   L  LD+S N L+ +P+++    +L ++ +  
Sbjct: 82  IGSLKQLQHLDLNRNLIVNVPDEIKSCKHLTHLDLSCNSLQRLPDAVTSLISLQELLLNE 141

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
            +  L  LP + G L  L  L++  N +  LP S   L  L+ L +  N     P  + E
Sbjct: 142 TY--LEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGE 199

Query: 370 MGA 372
           + +
Sbjct: 200 LKS 202


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/263 (38%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L+ L  L +++NR+ A+ A IG L+ L+KL+L  NR++ LP  IG L  L  L
Sbjct: 143 LPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKL 202

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  NQ++ LP  +S L  LEEL + +N  ++LP  IG+L +LK L V  N L  LP  I
Sbjct: 203 EVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEI 262

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  ++L+EL ++ N+L ALP  +G + +L++L ++ N + +LPT +  +  LR L +  N
Sbjct: 263 GNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEEN 322

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P ++     L ++ I  N  DL ALP  I +L+ L  LDIS N++   P     L
Sbjct: 323 LLTTLPNTIGQLKCLEELRIWKN--DLVALPLEIDSLKNLHTLDISFNKLSTFPLQITQL 380

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L V EN L   P  I ++
Sbjct: 381 EGLQKLNVAENGLTDLPDEINQL 403



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 152/288 (52%), Gaps = 3/288 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L++L  L L+ N +  +PA IG L+ L++L +  NR+  L   IG+L  L  L
Sbjct: 120 LPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N++ ALP  + +L +L++L++GSN L++LP  I  L SL++L ++ N    LP  I
Sbjct: 180 ELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+ L V  N+L  LP  +G + TL+ L +  N +  LP  + +L SL+ L +  N
Sbjct: 240 GTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P  +     L  + +  N   L  LP +IG L+ LEEL I  N +  LP     L
Sbjct: 300 QLSELPTEIGLVGDLRILCLEENL--LTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSL 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEM-GAQAVVQYMADLVEKRDAKTQPVK 394
             L  L +  N L   P  I ++ G Q +      L +  D   Q VK
Sbjct: 358 KNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVK 405



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 142/252 (56%), Gaps = 2/252 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             L+LS   I  +PA I GL+ L+KLD  A  +  LP  +G L +L  L L  N+++ LP
Sbjct: 85  AKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTILPPEVGALTNLYKLRLNRNELTILP 144

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             +  L +L+EL +  N LS+L   IG+L  L+KL +  N L  LP  IG+ + L++L V
Sbjct: 145 AEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLVALPAEIGKLTQLKKLEV 204

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N+L  LP  +  + +LE L +  N    LPT + +LS+L+ L VS N+L ++P  +  
Sbjct: 205 GSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGN 264

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            TTL ++ I  N   L ALP  IG L+ L+ L + +NQ+  LP    ++  LR+L ++EN
Sbjct: 265 LTTLQELYIEEN--QLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRILCLEEN 322

Query: 359 PLEVPPRNIVEM 370
            L   P  I ++
Sbjct: 323 LLTTLPNTIGQL 334



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L++L  L + EN+++A+PA IG L SL+ L L +N++ ELP  IG +  L  L
Sbjct: 258 LPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELPTEIGLVGDLRIL 317

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP  + +L  LEEL +  N+L +LP  I SL +L  L +  N L   P  I
Sbjct: 318 CLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTLDISFNKLSTFPLQI 377

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L V  N L  LP+ + ++  LE L++  NN+  LP  ++ L  L+ LD+ +N
Sbjct: 378 TQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGLAKLQKLQNLDLRYN 437

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           ELE +P  +   + L ++N+  N+  L  +P  I  L+ L+ L + +  I
Sbjct: 438 ELEVLPSEVFALSNLQELNLMGNY--LTTIPVEITKLKKLQYLYLQHGLI 485



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 64/194 (32%), Positives = 106/194 (54%), Gaps = 5/194 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG +  L  L L EN +  +P TIG L  L++L +  N ++ LP  I  L +L  L
Sbjct: 304 LPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLHTL 363

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+  N++S  P+ +++L  L++L++  N L+ LPD I  L+ L++L +  N+L  LP  +
Sbjct: 364 DISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNLTSLPAGL 423

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD---- 283
            +   L+ L + YN L+ LP  V  +  L+ L++  N +  +P  ++ L  L+ L     
Sbjct: 424 AKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEITKLKKLQYLYLQHG 483

Query: 284 -VSFNELESVPESL 296
            +S  ELE V + L
Sbjct: 484 LISEQELERVKKML 497


>gi|326428302|gb|EGD73872.1| leucine rich repeat containing protein 40 [Salpingoeca sp. ATCC
           50818]
          Length = 535

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 156/284 (54%), Gaps = 16/284 (5%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +PD +  L +L  LD   N++  V   +G L  LK L+   N++  +PD +  L 
Sbjct: 74  NEIREIPDDVELLGALTLLDAHNNQLERVSDKLGALQELKALNFAHNKLRAIPDGVYALR 133

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L GNQI  +   +  L  LEELDL  N L SLP+S+G L  L++L +  N+L+ 
Sbjct: 134 HLKSLRLTGNQIQDVDERIGALTDLEELDLAENQLRSLPESLGRLAQLRRLALNKNNLQT 193

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +I Q S + EL + +N L A+P ++  + +L  L +RYN +  LP  + +L +LREL
Sbjct: 194 LPQSIAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTALP-RLCNLKALREL 252

Query: 283 DVSFNEL-------ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
            + FN +        ++P  LC       +++ +N   LR L  SI +L+ LE LD++NN
Sbjct: 253 SLGFNSITTLGDIRATLPSGLCI------LDVRDN--KLRDLSPSIVHLQALERLDVTNN 304

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +  LP    +L +L+ + +  NP+    R+I+  G Q +++Y+
Sbjct: 305 DLATLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYL 348



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 73/339 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           +N++ LP SI +LS +  L++  N + AVP ++  ++SL +LDL  N++  LP       
Sbjct: 189 NNLQTLPQSIAQLSLITELEIIHNSLTAVPLSLENMASLTRLDLRYNKLTALPRLCNLKA 248

Query: 156 -----------DSIGDLLS-----LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                       ++GD+ +     L  LD+R N++  L  ++  L  LE LD+ +N+L++
Sbjct: 249 LRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLRDLSPSIVHLQALERLDVTNNDLAT 308

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTI---GQCSSLRELR---------------VDYN 241
           LP  +G L  LK ++++ N +  L   I   G    L+ LR               V   
Sbjct: 309 LPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGILKYLRSRMTEEQLAELTSGSVQSE 368

Query: 242 RLKALPEAVGKIH-----TLEV-----------------------LSVRYNNIKQLPTTM 273
                 EAV K       TL++                       L +R N ++ LP   
Sbjct: 369 ASAQRQEAVAKAEMKASATLDLSEQKLQLVPSKQLEAAQGAGISKLVLRKNLLQNLPAGT 428

Query: 274 SSL-SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
             L S+L ELD+ FN+++++  S+     L  +++  N   L +LP  + +L  L +L +
Sbjct: 429 DCLASTLTELDLGFNKIDTLSPSIALLGNLTVLDLQGN--QLTSLPSELISLASLRDLIL 486

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPPRNIVEM 370
           S N+ R LP+    L  L  L V +N ++ + P  +  M
Sbjct: 487 SFNRFRQLPECVYDLLALENLVVNDNAIDTLDPHGLTRM 525



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 92/319 (28%), Positives = 149/319 (46%), Gaps = 53/319 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+S+G+L+ L  L L++N +  +P +I  LS + +L++  N +  +P S+ ++ 
Sbjct: 166 NQLRSLPESLGRLAQLRRLALNKNNLQTLPQSIAQLSLITELEIIHNSLTAVPLSLENMA 225

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD-------------------- 202
           SL  LDLR N+++ALP  L  L  L EL LG N++++L D                    
Sbjct: 226 SLTRLDLRYNKLTALP-RLCNLKALRELSLGFNSITTLGDIRATLPSGLCILDVRDNKLR 284

Query: 203 ----SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE---AVGKIHT 255
               SI  L +L++L V  NDL  LP  +G    L+ + +D N +++L     A G    
Sbjct: 285 DLSPSIVHLQALERLDVTNNDLATLPPELGVLPKLKSIVLDGNPMRSLRRDIIARGTQGI 344

Query: 256 LEVLSVRYNNIKQLP-----TTMSSLSSLRE-------------LDVSFNELESVPESLC 297
           L+ L  R    +QL      +  S  S+ R+             LD+S  +L+ VP    
Sbjct: 345 LKYLRSRMTE-EQLAELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQLVPSKQL 403

Query: 298 FATT---LVKMNIGNNFADLRALPRSIGNL-EMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            A     + K+ +  N   L+ LP     L   L ELD+  N+I  L  S  +L  L VL
Sbjct: 404 EAAQGAGISKLVLRKNL--LQNLPAGTDCLASTLTELDLGFNKIDTLSPSIALLGNLTVL 461

Query: 354 RVQENPLEVPPRNIVEMGA 372
            +Q N L   P  ++ + +
Sbjct: 462 DLQGNQLTSLPSELISLAS 480



 Score = 58.2 bits (139), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 117/259 (45%), Gaps = 33/259 (12%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           NKL D    L  SI  L +L  LD++ N +  +P  +G L  LK + L  N +  L   I
Sbjct: 281 NKLRD----LSPSIVHLQALERLDVTNNDLATLPPELGVLPKLKSIVLDGNPMRSLRRDI 336

Query: 159 ---GDLLSLVYLDLR--GNQISAL---------------PVALSRLVRLEELDLGSNNLS 198
              G    L YL  R    Q++ L                VA + +     LDL    L 
Sbjct: 337 IARGTQGILKYLRSRMTEEQLAELTSGSVQSEASAQRQEAVAKAEMKASATLDLSEQKLQ 396

Query: 199 SLPD-----SIGSLISLKKLIVETNDLEELPH-TIGQCSSLRELRVDYNRLKALPEAVGK 252
            +P      + G+ IS  KL++  N L+ LP  T    S+L EL + +N++  L  ++  
Sbjct: 397 LVPSKQLEAAQGAGIS--KLVLRKNLLQNLPAGTDCLASTLTELDLGFNKIDTLSPSIAL 454

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  L VL ++ N +  LP+ + SL+SLR+L +SFN    +PE +     L  + + +N  
Sbjct: 455 LGNLTVLDLQGNQLTSLPSELISLASLRDLILSFNRFRQLPECVYDLLALENLVVNDNAI 514

Query: 313 DLRALPRSIGNLEMLEELD 331
           D    P  +  + ML  LD
Sbjct: 515 DTLD-PHGLTRMPMLACLD 532


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 158/278 (56%), Gaps = 2/278 (0%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L+L  NR+  +P  +G L +L++L+L  N++ 
Sbjct: 94  QNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLT 153

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L  L  LDL GNQ++  P  + +L +L+ L+LG N L++L + +  L +L+ 
Sbjct: 154 ILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQI 213

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + +N L  LP  IGQ   L+EL +   +LK LP+ + ++  L  L++ Y ++  LP  
Sbjct: 214 LNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKE 273

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  LS L++L +  N+L ++PE +     L ++ +GNN   LR LP+ I  L+ L+ L +
Sbjct: 274 IGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLHL 331

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQI   P     L  L+ L +  N L   P+ I ++
Sbjct: 332 ESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQL 369



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 168/311 (54%), Gaps = 5/311 (1%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDVRILNLNG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L+L  N++  +P  +G L +L+ L+L++N++  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  VLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L+EL+L  N L+ LP+ IG L  L+ L +E N L   P  IG+   L+ L + 
Sbjct: 135 EVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQKLQVLNLG 194

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           +N+L  L E V ++  L++L++  N +  LP  +  L  L+EL++   +L+++P+ +   
Sbjct: 195 FNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQL 254

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  +N+  N+  L  LP+ IG L  L++L +  NQ+  LP+    L +L+ L +  NP
Sbjct: 255 QNLRGLNL--NYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNP 312

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 313 LRTLPKEIEQL 323



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 116/199 (58%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N + + +  LP  IG+L  L  L+L + ++  +P  I  L +L+ L+L+   + 
Sbjct: 209 QNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLT 268

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L L GNQ++ LP  + +L +L+EL LG+N L +LP  I  L  L+ 
Sbjct: 269 ILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQT 328

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +E+N +   P  IGQ  +L+EL + +N+L  LP+ +G++  L+ L++++N +  LP  
Sbjct: 329 LHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQLATLPKE 388

Query: 273 MSSLSSLRELDVSFNELES 291
           +     LR+L++  N + S
Sbjct: 389 IGQQQKLRKLNLYNNPIAS 407



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 120/209 (57%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + +  L + + +L +L  L+L  N +  +P  IG L  L++L+L+  ++  LP  I  L
Sbjct: 195 FNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGIIQL 254

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L+L    ++ LP  + +L +L++L L  N L++LP+ IG L  L++L +  N L 
Sbjct: 255 QNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLR 314

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  I Q   L+ L ++ N++   P+ +G++  L+ L++ +N +  LP  +  L +L+E
Sbjct: 315 TLPKEIEQLQKLQTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQE 374

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN 310
           L++ FN+L ++P+ +     L K+N+ NN
Sbjct: 375 LNLKFNQLATLPKEIGQQQKLRKLNLYNN 403


>gi|79490247|ref|NP_194717.2| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
 gi|57868156|gb|AAW57416.1| plant intracellular Ras-group-related LRR protein 7 [Arabidopsis
           thaliana]
 gi|332660288|gb|AEE85688.1| plant intracellular ras group-related LRR 7 [Arabidopsis thaliana]
          Length = 373

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/275 (38%), Positives = 151/275 (54%), Gaps = 2/275 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ ++L    +  LP+   +L ++  LDL  N I  +P +L+ RL+ L  LD+ SN + +
Sbjct: 55  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 114

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N L  LP TI  C SL EL  ++N L  LP+ +G ++  L+ 
Sbjct: 115 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLELTNLKK 174

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L V  N +  LP T++ L+SLR LD   N L  +PE L     L  +N+  NF  L ALP
Sbjct: 175 LCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQYLSALP 234

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELDIS N+I VLP+S   + RLR L  + NPL  PP  +VE    AV +Y
Sbjct: 235 SSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLHAVREY 294

Query: 379 MADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKR 413
           ++  +  +   T   K+   + ++  +   N R R
Sbjct: 295 LSQKMNGKLVNTAAKKKTWGFRKLVKYGTFNGRSR 329



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 108/184 (58%), Gaps = 5/184 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + I+ LP+SIG LS L  L++S N +V++P TI    SL++L+ + N +I LPD+IG +L
Sbjct: 110 NQIKALPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRSLEELNANFNELIRLPDNIGLEL 169

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N++ +LP  ++ L  L  LD   N L  LP+ + +LI+L+ L V  N   
Sbjct: 170 TNLKKLCVNSNKLISLPATITCLTSLRVLDARLNCLMILPEDLENLINLEILNVSQNFQY 229

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--SSLS 277
           L  LP +IG   +L EL + YN++  LPE++G +  L  LS   N +   P  +   SL 
Sbjct: 230 LSALPSSIGLLLNLLELDISYNKITVLPESIGCMRRLRKLSAEGNPLVSPPIEVVEQSLH 289

Query: 278 SLRE 281
           ++RE
Sbjct: 290 AVRE 293


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/299 (33%), Positives = 155/299 (51%), Gaps = 29/299 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++I  L+ L +LDLS N++  +P  I  L+ L++LDL  N++ ELP++I  L  L  L
Sbjct: 58  LPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQEL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR NQ++ LP A++ L RL+ LDL +N L+ LP++I SL  L+   +  N+L ELP+++
Sbjct: 118 NLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSL 177

Query: 228 GQ--------CSS---------------LRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +        C S               L+EL +  N L+ +P  +  +H LE+LS+  N
Sbjct: 178 SRLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGN 237

Query: 265 NIKQLPTTMSSLSSLREL----DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
            I +LP ++  L SL  +    D   N L  +P   C         I  N  +L  LP  
Sbjct: 238 QISELPKSLDKLQSLEFIILGADDGGNPLSKLPP--CIQRIKQIRRIWANNCELHFLPDW 295

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +     LEEL + +N +  LP S   L  L  +++  NPL        E G +AV+QY+
Sbjct: 296 LNEFPQLEELYLGSNCLTDLPASLGQLPHLDDIQLDHNPLNPDLAAAYEQGTEAVLQYL 354



 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 160/288 (55%), Gaps = 11/288 (3%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           K    IE + ++G  +L+L    +  I   P++I  L+ L  LDLS N++  +P  I  L
Sbjct: 9   KAEQRIEKARQEGAIELDLSKIELTEI---PEAIASLTQLQQLDLSRNQVTQLPEAIASL 65

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + L+ LDL  N++ +LP++I  L  L  LDL  NQ++ LP A++ L +L+EL+L +N L+
Sbjct: 66  TQLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLT 125

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP++I SL  L++L +  N L ELP  I   + L+   + +N L  LP ++ ++  LE+
Sbjct: 126 ELPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSLSRLLYLEI 185

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
                N ++Q+P+ +  L  L+EL +  N+LE +P  +C    L  ++IG N   +  LP
Sbjct: 186 FDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGN--QISELP 243

Query: 319 RSIGNLEMLEEL----DISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           +S+  L+ LE +    D   N +  LP   + + ++R  R+  N  E+
Sbjct: 244 KSLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQIR--RIWANNCEL 289



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/146 (34%), Positives = 88/146 (60%), Gaps = 3/146 (2%)

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           +L E+P  I   + L++L +  N++  LPEA+  +  L+ L +  N + QLP  ++SL+ 
Sbjct: 31  ELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLAR 90

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+ LD+S N+L  +PE++     L ++N+ NN   L  LP +I +L  L+ LD+SNNQ+ 
Sbjct: 91  LQRLDLSNNQLTELPEAIASLAQLQELNLRNN--QLTELPEAIASLTRLQRLDLSNNQLT 148

Query: 339 VLPDSFRMLSRLRVLRVQENPL-EVP 363
            LP++   L++L+   +  N L E+P
Sbjct: 149 ELPEAIASLTQLQSFDLSHNELTELP 174



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/136 (33%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           EL +    L  +PEA+  +  L+ L +  N + QLP  ++SL+ L+ LD+S N+L  +PE
Sbjct: 24  ELDLSKIELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPE 83

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           ++     L ++++ NN   L  LP +I +L  L+EL++ NNQ+  LP++   L+RL+ L 
Sbjct: 84  AIASLARLQRLDLSNN--QLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLD 141

Query: 355 VQENPLEVPPRNIVEM 370
           +  N L   P  I  +
Sbjct: 142 LSNNQLTELPEAIASL 157


>gi|195486155|ref|XP_002091384.1| GE13624 [Drosophila yakuba]
 gi|194177485|gb|EDW91096.1| GE13624 [Drosophila yakuba]
          Length = 849

 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 145/262 (55%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 73  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  LI+L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP+ +S+  ++  L
Sbjct: 193 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV +   +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 253 SICSNSLEAFPFSVGMLKSLVTLKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 310

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML  LR L   +N L   P
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLP 332



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 133/239 (55%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 164 LNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVSANIGKL 223

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SN+L + P S+G L SL  L  E+N L 
Sbjct: 224 RDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTLKCESNGLT 283

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 284 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSV 343

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++   + +  +N+ NN+  + ALP S+ NL  L  + +S+NQ + L
Sbjct: 344 LSVANNQLSALPQNIGNLSKMKVLNVVNNY--INALPVSMLNLVNLTSMWLSDNQSQPL 400



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 129/260 (49%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+ A+P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 32  FPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 92  DLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR L +  N L  LP+++ ++  L+ L +  N   +LP  +  L SLREL + FN
Sbjct: 152 GRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFN 211

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  V  ++     L       N  D   LP  + N   +E L I +N +   P S  ML
Sbjct: 212 QIRRVSANIGKLRDLQHFEANGNLLD--TLPSELSNWRNVEVLSICSNSLEAFPFSVGML 269

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L+ + N L   P +I
Sbjct: 270 KSLVTLKCESNGLTELPDSI 289



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ ALP  L     L  L + SNNL S+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+A+  + +L+ L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N  +   LP  
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGN--EFTELPEV 196

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +G L+ L EL I  NQIR +  +   L  L+      N L+  P
Sbjct: 197 VGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLP 240


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 147/262 (56%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L  L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L  LE LDL  N  + LP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  +++  N   L +LP+ IG L+ L EL++ +N+++ LP     L
Sbjct: 212 KLKTLPKEIEQLQNLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQL 269

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+VLR+  N   +  +  ++
Sbjct: 270 QNLQVLRLYSNSFSLKEKQKIQ 291



 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 153/280 (54%), Gaps = 2/280 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +  +E LP  IG   +L  L+L  N++ ++P  IG L +L+ L+L  N+   LP  IG L
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQL 62

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL GNQ ++LP  + +L +L  L+L  N  +SLP  IG L +L++L +  N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +D+NR    P+ + +  +L+ L +  + +K LP  +  L +L+ 
Sbjct: 123 FLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 182

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N+L S+P+ +     L ++N+ +N   L+ LP+ I  L+ L+ L +  NQ+  LP
Sbjct: 183 LHLDGNQLTSLPKEIGQLQNLFELNLQDN--KLKTLPKEIEQLQNLQSLHLDGNQLTSLP 240

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
                L  L  L +Q+N L+  P+ I ++    V++  ++
Sbjct: 241 KEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 280



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L  LR L+++ N+  S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F     LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---FLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 38  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 94

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 95  YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 154

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 155 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 214

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 215 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 272

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 273 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 308



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+LS N+I  +P  I  L  L+ L L  N++  LP  IG L  L +L
Sbjct: 35  LPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 94

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L+L  N + ++P  I  L  L+ L ++ N L  LP  I
Sbjct: 95  YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 154

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  NRL  LP+ +G +  L+ L +  N +  LP  +  L +L+ L++  N
Sbjct: 155 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 214

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++ + +     L  +++ +N   L   P+ IG L+ L+ LD+ +NQ+  LP+    L
Sbjct: 215 RLTTLSKEIEQLQNLKSLDLRSN--QLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQL 272

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 273 KNLQTLDLDSNQLTTLPQEIGQL 295



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 127/230 (55%), Gaps = 2/230 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++ LDL ANR   LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++L
Sbjct: 22  VRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTL 81

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  IG L  L+ L +  N L  LP  IGQ  +L+ L + YN++K +P+ + K+  L+ L 
Sbjct: 82  PQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLG 141

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N +  LP  +  L +L+ LD+S N L ++P+ +     L  + + +N   L  LP  
Sbjct: 142 LDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN--QLTILPNE 199

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           IG L+ L+ L++ NN++  L      L  L+ L ++ N L   P+ I ++
Sbjct: 200 IGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQL 249



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 107 EIGQLKNLKSLNLS---YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 163

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 164 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 223

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 224 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 283

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 284 QLTTLPQEIGQLQNLQELFLNNNQLSS 310



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L +L+L +N + ++P  I  L  L+ 
Sbjct: 11  DLTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQS 70

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ   L+ L +  N+L  LP+ +G++  L+ L++ YN IK +P  
Sbjct: 71  LYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKK 130

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L  L+ L +  N+L ++P+ +     L  +++  N   L  LP+ IG+L+ L++L +
Sbjct: 131 IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTN--RLTTLPQEIGHLQNLQDLYL 188

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+ +LP+    L  L+ L ++ N L    + I ++
Sbjct: 189 VSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 226


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 87  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 143

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 144 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 203

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 204 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 263

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 264 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 321

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 322 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 142/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 50  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 109

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 110 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 169

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +   
Sbjct: 170 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 229

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L ++ N 
Sbjct: 230 QNLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 287

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 288 LTTFPKEIGQL 298



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 151/284 (53%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L
Sbjct: 61  LPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I
Sbjct: 121 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N
Sbjct: 181 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 240

Query: 288 ELESVPESLCFATTLVKMNIGNN----------------FADLRA-----LPRSIGNLEM 326
           +L  +P  +     L  +N+ NN                  DLR+      P+ IG L+ 
Sbjct: 241 QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKN 300

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ LD+ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 301 LQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 344



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 129/231 (55%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++ LDL ANR   LP  IG L +L  L+L  NQ++ LP  + +L  L +L+L +N + +
Sbjct: 47  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 106

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P  I  L  L+ L +  N L  LP  IGQ   L+ L +  N+L  LP+ +G++  L+ L
Sbjct: 107 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 166

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++ YN IK +P  +  L  L+ L +  N+L ++P+ +     L  +++  N   L  LP+
Sbjct: 167 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTN--RLTTLPQ 224

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG+L+ L++L + +NQ+ +LP+    L  L+ L ++ N L    + I ++
Sbjct: 225 EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 275



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 156 EIGQLKNLKSLNLS---YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 273 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 333 QLTTLPQEIGQLQNLQELFLNNNQLSS 359



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 37  DLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 97  LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++S+N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ LD+
Sbjct: 157 IGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP     L  L+ L +  N L + P  I ++
Sbjct: 215 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQL 252


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 150/284 (52%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++ A+P  IG L +L+ L L+ N++  LP  IG L +L  L
Sbjct: 61  LPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ LDLG+N L++LP  IG L +L+ L +  + L  LP  I
Sbjct: 121 FLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N +  LP  +  L +L EL +  N
Sbjct: 181 GKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHN 240

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
           +L  +P+ +     L +  + NN                     +  L   P+ IG L+ 
Sbjct: 241 QLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQK 300

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L++ NNQ+  LP+    L  L+ L + EN L+  P+ I ++
Sbjct: 301 LQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 344



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L+ N++  +P  I  L +L+ LDL  N++  LP  IG L +L  L
Sbjct: 107 LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  +Q++ LP  + +L  L ELDL  N L+ LP  IG L +L++ +++ N L  LP  I
Sbjct: 167 SLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L EL + +N+L  LP+ +G++  L+   +  N    LP  +  L +L+EL +S+N
Sbjct: 227 GKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +N+ NN   L  LP  I  L+ L+ L++S NQ++ +P     L
Sbjct: 287 QLTTFPKEIGKLQKLQTLNLWNN--QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEIGQL 344

Query: 348 SRLR 351
             L+
Sbjct: 345 QNLK 348



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 76/212 (35%), Positives = 124/212 (58%), Gaps = 3/212 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L N   + +  LP  IGKL +L  L L E+++  +P  IG L +L +L
Sbjct: 133 EIRQLKNLQMLDLGN---NQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHEL 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++  LP  IG L +L    L  NQ++ LP  + +L  L EL LG N L+ LP  I
Sbjct: 190 DLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEI 249

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++ +++ N    LP  IGQ  +L+EL + YN+L   P+ +GK+  L+ L++  N
Sbjct: 250 GQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNN 309

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  LP  +  L +L+ L++S N+L+++P+ +
Sbjct: 310 QLTTLPEEIEQLKNLKTLNLSENQLKTIPQEI 341



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 122/225 (54%), Gaps = 2/225 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L   ++  LP  I  L +L  LDL  NQ++ALP  + +L  L+ L L  N L++LP  IG
Sbjct: 53  LSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIG 112

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L  LP  I Q  +L+ L +  N+L  LP+ +GK+  L++LS+  + 
Sbjct: 113 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQ 172

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L ELD+S N+L  +P+ +     L +  + NN   L  LP+ IG L+
Sbjct: 173 LTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNN--QLTILPKEIGKLQ 230

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L EL + +NQ+ +LP     L  L+   +  N   + P+ I ++
Sbjct: 231 NLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQL 275



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 72/134 (53%), Gaps = 2/134 (1%)

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R L +   +L  LP+ + ++  L++L + +N +  LP  +  L +L+ L + +N+L ++P
Sbjct: 49  RVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALP 108

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + +     L  + + NN   L  LP  I  L+ L+ LD+ NNQ+  LP     L  L++L
Sbjct: 109 KEIGQLKNLKVLFLNNN--QLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLL 166

Query: 354 RVQENPLEVPPRNI 367
            + E+ L + P+ I
Sbjct: 167 SLYESQLTILPQEI 180


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  L LS N++  +P  IG L +L+ L+L  N++  LP  IG L +L  L
Sbjct: 61  LPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHNQLTTLPKEIGRLQNLQEL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L L +N L +LP  IG L +L+ L +  N L  LP  I
Sbjct: 121 YLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+   ++ N+L  LPE +GK+  L+VL +  N +  LP  +  L +L+ LD+ +N
Sbjct: 181 GQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +PE +     L  +++ +N    + +P+ IG L+ L+ L + +NQ +++P     L
Sbjct: 241 QFTILPEEIGKLKNLQVLHLHDN--QFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKL 298

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L++L +  N  ++ P+ I ++
Sbjct: 299 KNLKMLSLGYNQFKIIPKEIEQL 321



 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 147/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L+ N++  +P  IG L +L++L L  N+++ LP  IG L +L  L
Sbjct: 107 LPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+  +L +N L++LP+ IG L +L+ L +  N L  LP  I
Sbjct: 167 YLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN+   LPE +GK+  L+VL +  N  K +P  +  L +L+ L +  N
Sbjct: 227 GQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + + +P+ +     L  +++G  +   + +P+ I  L+ L+ L++  NQ+  LP     L
Sbjct: 287 QFKIIPKEIGKLKNLKMLSLG--YNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQL 344

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N  +  P+ I ++
Sbjct: 345 QNLQELYLSYNQFKTLPKEIGQL 367



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 141/253 (55%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L L  N+++ +P  IG L +L+ L L  N++  LP  IG L +L   
Sbjct: 130 LPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVF 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L  L+ L+L +N L++LP  IG L +L+ L +  N    LP  I
Sbjct: 190 ELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+ K +P+ +GK+  L+VL +  N  K +P  +  L +L+ L + +N
Sbjct: 250 GKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + + +P+ +     L  +N+  N   L  LP+ I  L+ L+EL +S NQ + LP     L
Sbjct: 310 QFKIIPKEIEQLQNLQWLNLDAN--QLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQL 367

Query: 348 SRLRVLRVQENPL 360
             L+ L +  + L
Sbjct: 368 KNLKKLYLNNHQL 380



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 127/226 (56%), Gaps = 3/226 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L L N   + +  LP  IG+L +L   +L+ N++  +P  IG L +L+ L
Sbjct: 156 EIGQLKNLQTLYLWN---NQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L+ N++  LP  IG L +L +LDL  NQ + LP  + +L  L+ L L  N    +P  I
Sbjct: 213 ELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEI 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N  + +P  IG+  +L+ L + YN+ K +P+ + ++  L+ L++  N
Sbjct: 273 GKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDAN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  LP  +  L +L+EL +S+N+ +++P+ +     L K+ + N+
Sbjct: 333 QLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNH 378



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 104/184 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL +L  L+L+ N++  +P  IG L +L+ LDL  N+   LP+ IG L +L  L
Sbjct: 199 LPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVL 258

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ   +P  + +L  L+ L L  N    +P  IG L +LK L +  N  + +P  I
Sbjct: 259 HLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLKMLSLGYNQFKIIPKEI 318

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +D N+L  LP+ + ++  L+ L + YN  K LP  +  L +L++L ++ +
Sbjct: 319 EQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNH 378

Query: 288 ELES 291
           +L S
Sbjct: 379 QLSS 382



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 122/239 (51%), Gaps = 25/239 (10%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L ++I + L +  LDL   ++  LP  + +L  L+ L L  N L +LP  IG L +L+
Sbjct: 36  MDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLR 95

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLK-----------------------ALPE 248
            L +  N L  LP  IG+  +L+EL ++YN+L                         LP+
Sbjct: 96  VLELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPK 155

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +G++  L+ L +  N +  LP  +  L +L+  +++ N+L ++PE +     L  + + 
Sbjct: 156 EIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELN 215

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           NN   L  LP+ IG L+ L+ LD+  NQ  +LP+    L  L+VL + +N  ++ P+ I
Sbjct: 216 NN--QLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEI 272


>gi|359461194|ref|ZP_09249757.1| Miro domain-containing protein [Acaryochloris sp. CCMEE 5410]
          Length = 448

 Score =  150 bits (379), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/284 (34%), Positives = 153/284 (53%), Gaps = 19/284 (6%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP  IG+L  L +L+LS   +  +P  IG LS+L+ L+L+ N++  LP  IG L 
Sbjct: 116 NSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPEIGQLSNLQSLNLYKNQLRTLPPEIGQLK 175

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  LD+R N++SALP  +  L  L+ L L  N L +LP  IG L +L+KL V+ N L  
Sbjct: 176 QLQRLDIRNNRLSALPPEIGGLQNLKRLTLHHNQLKTLPPEIGELKNLQKLAVDYNQLHR 235

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L  L + YN+LK LP ++G+++ L+VL + +N +  LP  +S L  L  L
Sbjct: 236 LPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTHLPPEISQLHRLEVL 295

Query: 283 DVSFNELE------------------SVPESLCFATTL-VKMNIGNNFADLRALPRSIGN 323
            ++ N+L+                  + PESL F+    +K      F  + +LP  IG 
Sbjct: 296 SLTSNKLQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKEEYATTFNQVSSLPPEIGQ 355

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L  L++L++ +  +  LP     L  L++L +  N L   P  I
Sbjct: 356 LTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEI 399



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 123/227 (54%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL    + ELP  IG L  +  + L GN +  LP  + +L +L+ L+L   NL+ LP  
Sbjct: 88  LDLQGLGLAELPPDIGQLRHVQIIYLVGNSLQTLPPEIGQLKQLKTLNLSGGNLNRLPPE 147

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L+ L +  N L  LP  IGQ   L+ L +  NRL ALP  +G +  L+ L++ +
Sbjct: 148 IGQLSNLQSLNLYKNQLRTLPPEIGQLKQLQRLDIRNNRLSALPPEIGGLQNLKRLTLHH 207

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K LP  +  L +L++L V +N+L  +P  +     LV  ++G  +  L+ LP SIG 
Sbjct: 208 NQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLV--SLGLPYNKLKHLPVSIGQ 265

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  L+ L ++ NQ+  LP     L RL VL +  N L+  P  I+ +
Sbjct: 266 LNNLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHL 312



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 119/229 (51%), Gaps = 21/229 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IG+L +L  L +  N++  +P  IG L +L  L L  N++  LP SIG L 
Sbjct: 208 NQLKTLPPEIGELKNLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLN 267

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET----- 217
           +L  L L  NQ++ LP  +S+L RLE L L SN L   P  I  L +L+ L +       
Sbjct: 268 NLQVLGLNFNQLTHLPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGASPESL 327

Query: 218 ----------------NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
                           N +  LP  IGQ + L++L +    L  LP  +G++  L++L +
Sbjct: 328 AFSVQFHLKEEYATTFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGL 387

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
             N +  +P  +  L++L+ L++S+N+L+S+P  L   T L  +N+ NN
Sbjct: 388 SNNGLMSVPHEIGRLANLQGLELSYNQLKSLPPELKALTRLEYLNLSNN 436



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 23/219 (10%)

Query: 96  NLQNKLMD--NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ   +D   +  LP  IG+L +LVSL L  N++  +P +IG L++L+ L L+ N++  
Sbjct: 222 NLQKLAVDYNQLHRLPVEIGQLENLVSLGLPYNKLKHLPVSIGQLNNLQVLGLNFNQLTH 281

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS------------------- 194
           LP  I  L  L  L L  N++   P  +  L  LE L LG+                   
Sbjct: 282 LPPEISQLHRLEVLSLTSNKLQRFPTEIIHLTNLEVLHLGASPESLAFSVQFHLKEEYAT 341

Query: 195 --NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N +SSLP  IG L  L+ L + +  L  LP  IGQ  +L+ L +  N L ++P  +G+
Sbjct: 342 TFNQVSSLPPEIGQLTQLQDLNLGSCTLLNLPPEIGQLVNLQMLGLSNNGLMSVPHEIGR 401

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +  L+ L + YN +K LP  + +L+ L  L++S N L +
Sbjct: 402 LANLQGLELSYNQLKSLPPELKALTRLEYLNLSNNPLPA 440


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/263 (37%), Positives = 154/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L+SLV L L+EN++ +VPA IG L+SL+ LDL  N++  LP  IG L +L  L
Sbjct: 44  LPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQEL 103

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  L +L L  N L+S+P  IG L SL+ L +  N L  +P  I
Sbjct: 104 YLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEI 163

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL E  +  NRL ++P  +G + +L  L +  N +  +P  +  L+SL+EL +  N
Sbjct: 164 GQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDN 223

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL SVPE      +L+ +++ +N  +L ++P  +G L  L+ L +  NQ+  +P     L
Sbjct: 224 ELTSVPEETGQLASLMVLSLRDN--ELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQL 281

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L + +N L   P  I ++
Sbjct: 282 TLLTELFLDDNELTSVPAEIGQL 304



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 149/254 (58%), Gaps = 3/254 (1%)

Query: 118 LVSLDLSE-NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +V LDL + +   A+PA +G LS+L++L++  N +  LP  IG L SLV L L  NQ+++
Sbjct: 7   VVELDLEDVDLTAALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTS 66

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           +P  + +L  L  LDL  N L+SLP  IG L +L++L +  N L  +P  I Q +SLR+L
Sbjct: 67  VPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKL 126

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +D N L ++P  +G++ +LEVL +  N +  +P  +  L+SL E  +S N L SVP  +
Sbjct: 127 LLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEI 186

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
               +L ++ +  N   L ++P  IG L  L+EL + +N++  +P+    L+ L VL ++
Sbjct: 187 GLLASLTELFLSGN--QLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLSLR 244

Query: 357 ENPLEVPPRNIVEM 370
           +N L   P  + ++
Sbjct: 245 DNELTSVPAEVGQL 258



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+LS+L  L++S N +  +P  IG L+SL KL L  N++  +P  IG L SL  L
Sbjct: 21  LPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLASLRVL 80

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ+++LP  +  L  L+EL L  N L+S+P  I  L SL+KL+++ N+L  +P  I
Sbjct: 81  DLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSVPAEI 140

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N+L ++P  +G++ +L    +  N +  +P  +  L+SL EL +S N
Sbjct: 141 GQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTELFLSGN 200

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L ++ + +N  +L ++P   G L  L  L + +N++  +P     L
Sbjct: 201 QLTSVPAEIGQLTSLQELWLDDN--ELTSVPEETGQLASLMVLSLRDNELTSVPAEVGQL 258

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  N L   P  I ++
Sbjct: 259 TSLKSLYLYGNQLTSVPAEIGQL 281



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/200 (37%), Positives = 121/200 (60%), Gaps = 2/200 (1%)

Query: 96  NLQNKLMDNIEW--LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +L+  L+D+ E   +P  IG+L+SL  L L++N++ +VPA IG L+SL +  L  NR+  
Sbjct: 122 SLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLAS 181

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L SL  L L GNQ++++P  + +L  L+EL L  N L+S+P+  G L SL  L
Sbjct: 182 VPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVL 241

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N+L  +P  +GQ +SL+ L +  N+L ++P  +G++  L  L +  N +  +P  +
Sbjct: 242 SLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEI 301

Query: 274 SSLSSLRELDVSFNELESVP 293
             L SL +L +  N+L SVP
Sbjct: 302 GQLRSLEKLYLDDNKLTSVP 321



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 128/224 (57%), Gaps = 5/224 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I +L+SL  L L +N + +VPA IG L+SL+ L L  N++  +P  IG L SL   
Sbjct: 113 VPAEIWQLTSLRKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTES 172

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN+++++P  +  L  L EL L  N L+S+P  IG L SL++L ++ N+L  +P   
Sbjct: 173 GLSGNRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEET 232

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N L ++P  VG++ +L+ L +  N +  +P  +  L+ L EL +  N
Sbjct: 233 GQLASLMVLSLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDN 292

Query: 288 ELESVPESLCFATTLVKMNIGNNF-----ADLRALPRSIGNLEM 326
           EL SVP  +    +L K+ + +N      A++R L  +  N+E+
Sbjct: 293 ELTSVPAEIGQLRSLEKLYLDDNKLTSVPAEIRELRAAGCNVEL 336


>gi|194882925|ref|XP_001975560.1| GG20492 [Drosophila erecta]
 gi|190658747|gb|EDV55960.1| GG20492 [Drosophila erecta]
          Length = 849

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 73  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  LI+L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP+ +S+  ++  L
Sbjct: 193 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 253 SICSNSLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 310

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML  LR L   +N L   P
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLP 332



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 164 LNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVSANIGKL 223

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SN+L + P S+G L SL     E+N L 
Sbjct: 224 RDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLT 283

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 284 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSV 343

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++   + +  +N+ NN+  + ALP S+ NL  L  + +S+NQ + L
Sbjct: 344 LSVANNQLSALPQNIGNLSKMKVLNVVNNY--INALPVSMLNLVNLTSMWLSDNQSQPL 400



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 25/260 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+ A+P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 32  FPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 92  DLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR                       +L +R NN+  LP +M  L +L+ LD+  N
Sbjct: 152 GRLVNLR-----------------------ILELRLNNLMTLPKSMVRLINLQRLDIGGN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           E   +PE +    +L ++ I  +F  +R +  +IG L  L+  + + N +  LP      
Sbjct: 189 EFTELPEVVGELKSLRELWI--DFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNW 246

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             + VL +  N LE  P ++
Sbjct: 247 RNVEVLSICSNSLEAFPFSV 266



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ ALP  L     L  L + SNNL S+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+A+  + +L+ L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N  +   LP  
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGN--EFTELPEV 196

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +G L+ L EL I  NQIR +  +   L  L+      N L+  P
Sbjct: 197 VGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLP 240


>gi|148225142|ref|NP_001080350.1| leucine-rich repeat protein SHOC-2 [Xenopus laevis]
 gi|82242622|sp|Q8AVI4.1|SHOC2_XENLA RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|27503220|gb|AAH42263.1| Shoc2-prov protein [Xenopus laevis]
          Length = 577

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/270 (34%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 220 NKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 279

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +LS+   L+EL+L +NN+S+LP+ +  SL+ +  L +  N  +
Sbjct: 280 SLSRLGLRYNRLSAVPRSLSKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQ 339

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q SS+  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 340 SYP--VGGPSQFSSIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 397

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    ++  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 398 SMVELNLATNQLTKIPEDVSGLVSIEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 455

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 456 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 485



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 147/314 (46%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +LV L LSEN + ++P ++  L  L  LDL  N++ E+P  +  L 
Sbjct: 128 NKLQSLPAEVGNLVNLVKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREIPPVVYRLS 187

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   L  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 188 SLTTLFLRFNRITAVEKDLKMLPKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEH 247

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P ++S  S L EL
Sbjct: 248 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAVPRSLSKCSELDEL 307

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 308 NLENNNISTLPEGLLSSLVKVNSLTLARNCFQSYPVGGPSQFSSIYSLNMEHNRINKIPF 367

Query: 299 -----ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  + VL
Sbjct: 368 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSIEVL 425

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 426 ILSNNLLKKLPHGI 439



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 156/294 (53%), Gaps = 40/294 (13%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    SS+  L++ 
Sbjct: 306 ELNLEN---NNISTLPE--GLLSSLVKVNSLTLARNCFQSYP--VGGPSQFSSIYSLNME 358

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 359 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 418

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+S++ LI+  N L++LPH IG    LREL ++ N+L++LP  +                
Sbjct: 419 LVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEI---------------- 462

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
                  + L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE 
Sbjct: 463 -------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLEN 513

Query: 327 LEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 514 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 567



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 227 IGQCSSLRELRVDYNR--LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + +C      R+D  +  +  LP ++  +  +  L +  N ++ LP  + +L +L +L +
Sbjct: 89  LSKCREENSTRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGNLVNLVKLAL 148

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L S+P+SL     L  +++ +N   LR +P  +  L  L  L +  N+I  +    
Sbjct: 149 SENSLTSLPDSLDNLKKLCMLDLRHN--KLREIPPVVYRLSSLTTLFLRFNRITAVEKDL 206

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
           +ML +L +L ++EN ++  P  I E+
Sbjct: 207 KMLPKLTMLSIRENKIKHLPAEIGEL 232



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 8/98 (8%)

Query: 273 MSSLSSLRE-----LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
           +  LS  RE     LD++   +  +P S+   T + ++ +  N   L++LP  +GNL  L
Sbjct: 86  IKELSKCREENSTRLDLAKKSIHMLPVSIKDLTQITELYLYGN--KLQSLPAEVGNLVNL 143

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
            +L +S N +  LPDS   L +L +L ++ N L E+PP
Sbjct: 144 VKLALSENSLTSLPDSLDNLKKLCMLDLRHNKLREIPP 181


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  150 bits (378), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 150/276 (54%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 61  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 117

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 118 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEI 177

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 178 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 237

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 238 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 295

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 296 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 331



 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 142/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 24  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 83

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 84  EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 143

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +   
Sbjct: 144 YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 203

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L ++ N 
Sbjct: 204 QNLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 261

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 262 LTTFPKEIGQL 272



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 151/284 (53%), Gaps = 21/284 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L
Sbjct: 35  LPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 94

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I
Sbjct: 95  YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKI 154

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N
Sbjct: 155 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 214

Query: 288 ELESVPESLCFATTLVKMNIGNN----------------FADLRA-----LPRSIGNLEM 326
           +L  +P  +     L  +N+ NN                  DLR+      P+ IG L+ 
Sbjct: 215 QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKN 274

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ LD+ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 275 LQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 318



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/230 (32%), Positives = 129/230 (56%), Gaps = 2/230 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++ LDL ANR   LP  IG L +L  L+L  NQ++ LP  + +L  L +L+L +N + ++
Sbjct: 22  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTI 81

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  I  L  L+ L +  N L  LP  IGQ   L+ L +  N+L  LP+ +G++  L+ L+
Sbjct: 82  PKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLN 141

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           + YN IK +P  +  L  L+ L +  N+L ++P+ +     L  +++  N   L  LP+ 
Sbjct: 142 LSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTN--RLTTLPQE 199

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           IG+L+ L++L + +NQ+ +LP+    L  L+ L ++ N L    + I ++
Sbjct: 200 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 249



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 130 EIGQLKNLKSLNLS---YNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 186

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 187 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 246

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 247 EQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 306

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 307 QLTTLPQEIGQLQNLQELFLNNNQLSS 333



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 11  DLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 70

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 71  LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 130

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++S+N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ LD+
Sbjct: 131 IGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDL 188

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP     L  L+ L +  N L + P  I ++
Sbjct: 189 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQL 226


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 146/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP  IG+L  L  L+LS NR+V +P  IG L  LK+L L  N++  LP  IG L 
Sbjct: 83  ENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQ 142

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  ++L  N++  LP  + +L +L+EL L  N L++LP  IG L  LK L +  N L  
Sbjct: 143 NLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTI 202

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q   L EL +D N+L  LP+ +G++  L++L +  N    LP  +  L  L  L
Sbjct: 203 LPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEHL 262

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L ++P+ +     L  +++ NN       P++IG L+ L+ L +S+NQ+ +L +
Sbjct: 263 SLDDNQLATLPKGIGKLQKLENLSLSNN--RFVVFPKAIGRLQKLKALYLSDNQLAILSE 320

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L +L  L +  N     P+ + ++
Sbjct: 321 QSLHLQKLEYLHLNHNRFTTFPKEVQQL 348



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 140/255 (54%), Gaps = 2/255 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SL L    +  +P  IG L  L+ L+L  NR++ LP  IG L  L  L
Sbjct: 65  LPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKEL 124

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + RL  L++++L +N L +LP  IG L  LK+L +E N L  LP  I
Sbjct: 125 SLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEI 184

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L +  N+L  LPE V ++  LE LS+  N +  LP  +  L  L+ L +S N
Sbjct: 185 GKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDN 244

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ +N   L  LP+ IG L+ LE L +SNN+  V P +   L
Sbjct: 245 QFVILPKEIGQLQELEHLSLDDN--QLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRL 302

Query: 348 SRLRVLRVQENPLEV 362
            +L+ L + +N L +
Sbjct: 303 QKLKALYLSDNQLAI 317



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/309 (32%), Positives = 143/309 (46%), Gaps = 44/309 (14%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L  ++LS NR+V +P  IG L  LK+L L  N++  LP  IG L 
Sbjct: 129 NQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLK 188

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ++ LP  + +L  LEEL L +N L++LP  IG L  LK L +  N    
Sbjct: 189 KLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVI 248

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ   L  L +D N+L  LP+ +GK+  LE LS+  N     P  +  L  L+ L
Sbjct: 249 LPKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKAL 308

Query: 283 DVSFNELESVPESLCFATTLVKMNI------------------------GNNFA------ 312
            +S N+L  + E       L  +++                        GN F       
Sbjct: 309 YLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGI 368

Query: 313 --------------DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                          L  LP+ IG L+ L+EL + NNQ+ +LP     L +L  L +  N
Sbjct: 369 GQLQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKLQKLEYLNLSNN 428

Query: 359 PLEVPPRNI 367
            L   P+ I
Sbjct: 429 QLTTLPKEI 437



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 141/284 (49%), Gaps = 7/284 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + +NL N   + +  LP  IGKL  L  L L +N++  +P  IG L  LK L
Sbjct: 137 EIGRLQNLQKINLSN---NRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKLKNL 193

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +  N++  LP+ +  L  L  L L  NQ++ LP  + RL +L+ L L  N    LP  I
Sbjct: 194 YICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEI 253

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L ++ N L  LP  IG+   L  L +  NR    P+A+G++  L+ L +  N
Sbjct: 254 GQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDN 313

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGN 323
            +  L      L  L  L ++ N   + P+ +     L  +++ GN F     LP+ IG 
Sbjct: 314 QLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFT---ILPQGIGQ 370

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ LE L + NNQ+ +LP     L +L+ L +  N L + P+ I
Sbjct: 371 LQKLEYLFLDNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGI 414



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 133/268 (49%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ + +L  L  L L  N++  +P  IG L  LK L L  N+ + LP  IG L 
Sbjct: 198 NQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQ 257

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L +L L  NQ++ LP  + +L +LE L L +N     P +IG L  LK L +  N L  
Sbjct: 258 ELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAI 317

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L         L  L +++NR    P+ V ++  L+ L +  N    LP  +  L  L  L
Sbjct: 318 LSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYL 377

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L  +P+ +     L ++++ NN   L  LP+ IG L+ LE L++SNNQ+  LP 
Sbjct: 378 FLDNNQLTILPQGIGKLQKLKELSLDNN--QLTILPKGIGKLQKLEYLNLSNNQLTTLPK 435

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             R L  L  L ++  P     +N +E+
Sbjct: 436 EIRKLQNLHFLGLEGMPALNSQKNKIEI 463



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 141/263 (53%), Gaps = 3/263 (1%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           ++L+L ++++  +P  I  L +L+ L L    +  LP  IG L  L YL+L  N++  LP
Sbjct: 53  LALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLP 112

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +L+EL L  N L++LP  IG L +L+K+ +  N L  LP  IG+   L+EL +
Sbjct: 113 QEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYL 172

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           + N+L  LP+ +GK+  L+ L +  N +  LP  +  L  L EL +  N+L ++P+ +  
Sbjct: 173 EKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGR 232

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  + + +N      LP+ IG L+ LE L + +NQ+  LP     L +L  L +  N
Sbjct: 233 LQKLKLLFLSDN--QFVILPKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNN 290

Query: 359 PLEVPPRNIVEMGAQAVVQYMAD 381
              V P+ I  +     + Y++D
Sbjct: 291 RFVVFPKAIGRLQKLKAL-YLSD 312



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 116/209 (55%), Gaps = 2/209 (0%)

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           L ++ L+L  +Q++ LP  + +L  LE L L   NL++LP  IG L  L+ L +  N L 
Sbjct: 50  LDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLV 109

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L+EL ++ N+L  LP+ +G++  L+ +++  N +  LP  +  L  L+E
Sbjct: 110 TLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKE 169

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N+L ++P+ +     L  + I +N   L  LP  +  L+ LEEL + NNQ+  LP
Sbjct: 170 LYLEKNQLTTLPKEIGKLKKLKNLYICDN--QLTILPEEVIQLQELEELSLDNNQLATLP 227

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L +L++L + +N   + P+ I ++
Sbjct: 228 KKIGRLQKLKLLFLSDNQFVILPKEIGQL 256


>gi|19922294|ref|NP_611007.1| Lap1, isoform A [Drosophila melanogaster]
 gi|320543977|ref|NP_001188938.1| Lap1, isoform B [Drosophila melanogaster]
 gi|51316545|sp|Q9V780.1|LAP1_DROME RecName: Full=Protein lap1
 gi|7303113|gb|AAF58179.1| Lap1, isoform A [Drosophila melanogaster]
 gi|40882491|gb|AAR96157.1| RE64484p [Drosophila melanogaster]
 gi|318068607|gb|ADV37184.1| Lap1, isoform B [Drosophila melanogaster]
          Length = 849

 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 73  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  LI+L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP+ +S+  ++  L
Sbjct: 193 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 253 SICSNSLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 310

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML  LR L   +N L   P
Sbjct: 311 TIGMLRSLRFLFADDNQLRQLP 332



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 164 LNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVSANIGKL 223

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SN+L + P S+G L SL     E+N L 
Sbjct: 224 RDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLT 283

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 284 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSV 343

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++   + +  +N+ NN+  + ALP S+ NL  L  + +S+NQ + L
Sbjct: 344 LSVANNQLSALPQNIGNLSKMKVLNVVNNY--INALPVSMLNLVNLTSMWLSDNQSQPL 400



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 122/257 (47%), Gaps = 25/257 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+ A+P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 32  FPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 92  DLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR                       +L +R NN+  LP +M  L +L+ LD+  N
Sbjct: 152 GRLVNLR-----------------------ILELRLNNLMTLPKSMVRLINLQRLDIGGN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           E   +PE +    +L ++ I  +F  +R +  +IG L  L+  + + N +  LP      
Sbjct: 189 EFTELPEVVGELKSLRELWI--DFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNW 246

Query: 348 SRLRVLRVQENPLEVPP 364
             + VL +  N LE  P
Sbjct: 247 RNVEVLSICSNSLEAFP 263



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/224 (30%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ ALP  L     L  L + SNNL S+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+A+  + +L+ L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N  +   LP  
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGN--EFTELPEV 196

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +G L+ L EL I  NQIR +  +   L  L+      N L+  P
Sbjct: 197 VGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLP 240


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 89  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 146 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 206 GQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSN--QLTTLPEGIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 169/325 (52%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL+      +  
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLS-----ANRF 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           + LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L 
Sbjct: 61  KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P 
Sbjct: 121 SLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L + 
Sbjct: 181 EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLV 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L  +P  +     L  +N+ NN   L  L + I  L+ L+ LD+ +NQ+   P    
Sbjct: 241 SNQLTILPNEIGQLKNLQTLNLRNN--RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIE 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+VL +  N L   P  I ++
Sbjct: 299 QLKNLQVLDLGSNQLTTLPEGIGQL 323



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/207 (34%), Positives = 113/207 (54%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 158 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 215 YLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  I Q  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 275 EQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 335 QLTTLPQEIGQLQNLQELFLNNNQLSS 361


>gi|301627568|ref|XP_002942945.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Xenopus
           (Silurana) tropicalis]
          Length = 582

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKHLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLC 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   L+EL+L +NN+S+LP+ +  SL+ +  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAVPRSLAKCSELDELNLENNNISTLPEGLLSSLVKVNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    ++  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSIEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/294 (31%), Positives = 156/294 (53%), Gaps = 40/294 (13%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++ 
Sbjct: 311 ELNLEN---NNISTLPE--GLLSSLVKVNSLTLARNCFQSYP--VGGPSQFSTIYSLNME 363

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 423

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+S++ LI+  N L++LPH IG    LREL ++ N+L++LP  +                
Sbjct: 424 LVSIEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEI---------------- 467

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
                  + L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE 
Sbjct: 468 -------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLEN 518

Query: 327 LEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 519 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 121/217 (55%), Gaps = 2/217 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP SI  L+ +  L L  N++ ++PA +G L +L KL L  N +  LPDS+ +L  L
Sbjct: 112 IHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLALSENSLTSLPDSLDNLKKL 171

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N++  +P  + RL  L  L L  N ++++   I +L  L  L +  N ++ LP
Sbjct: 172 CMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKDIKTLSKLTMLSIRENKIKHLP 231

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+  +L  L V +N+L+ LP+ +G    +  L +++N +  LP T+ +L SL  L +
Sbjct: 232 AEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGL 291

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +N L +VP SL   + L ++N+ NN  ++  LP  +
Sbjct: 292 RYNRLSAVPRSLAKCSELDELNLENN--NISTLPEGL 326



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 140/298 (46%), Gaps = 46/298 (15%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL----------- 138
           K ++D +L+ K+ D  E   D IG  + +     S +  +  P    G+           
Sbjct: 36  KESKDKDLKTKVKDAKEGKRDPIGAQAGVA---FSVDNTIKRPNPASGMRKKASNAEVIK 92

Query: 139 -------SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
                   +  +LDL    I  LP SI DL  +  L L GN++ +LP  +  LV L +L 
Sbjct: 93  ELSKCREENATRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLA 152

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N+L+SLPDS+ +L  L  L +  N L E+P  + + SSL  L + +NR+ A+ + + 
Sbjct: 153 LSENSLTSLPDSLDNLKKLCMLDLRHNKLREIPAVVYRLSSLTTLFLRFNRITAVEKDIK 212

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            +  L +LS+R N IK LP  +  L +L  LDV+ N+LE                     
Sbjct: 213 TLSKLTMLSIRENKIKHLPAEIGELCNLITLDVAHNQLEH-------------------- 252

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
                LP+ IGN   +  LD+ +N++  LPD+   L  L  L ++ N L   PR++ +
Sbjct: 253 -----LPKEIGNCTQITNLDLQHNELLDLPDTIGNLCSLSRLGLRYNRLSAVPRSLAK 305



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 4/146 (2%)

Query: 227 IGQCSSLRELRVDYNR--LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + +C      R+D  +  +  LP ++  +  +  L +  N ++ LP  +  L +L +L +
Sbjct: 94  LSKCREENATRLDLAKKSIHMLPVSIKDLTQITELYLYGNKLQSLPAEVGCLVNLVKLAL 153

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L S+P+SL     L  +++ +N   LR +P  +  L  L  L +  N+I  +    
Sbjct: 154 SENSLTSLPDSLDNLKKLCMLDLRHN--KLREIPAVVYRLSSLTTLFLRFNRITAVEKDI 211

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LS+L +L ++EN ++  P  I E+
Sbjct: 212 KTLSKLTMLSIRENKIKHLPAEIGEL 237


>gi|195334517|ref|XP_002033924.1| GM21584 [Drosophila sechellia]
 gi|194125894|gb|EDW47937.1| GM21584 [Drosophila sechellia]
          Length = 903

 Score =  149 bits (376), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/258 (37%), Positives = 143/258 (55%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 127 NNLETIPQAIGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLI 186

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  LI+L++L +  N+  E
Sbjct: 187 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 246

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP+ +S+  ++  L
Sbjct: 247 LPEVVGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNWRNVEVL 306

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 307 SICSNSLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 364

Query: 343 SFRMLSRLRVLRVQENPL 360
           +  ML  LR L   +N L
Sbjct: 365 TIGMLRSLRFLFADDNQL 382



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 132/239 (55%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 218 LNNLMTLPKSMVRLINLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVSANIGKL 277

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SN+L + P S+G L SL     E+N L 
Sbjct: 278 RDLQHFEANGNLLDTLPSELSNWRNVEVLSICSNSLEAFPFSVGMLKSLVTFKCESNGLT 337

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 338 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSV 397

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++   + +  +N+ NN+  + ALP S+ NL  L  + +S+NQ + L
Sbjct: 398 LSVANNQLSALPQNIGNLSKMKVLNVVNNY--INALPVSMLNLVNLTSMWLSDNQSQPL 454



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/260 (29%), Positives = 124/260 (47%), Gaps = 25/260 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+ A+P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 86  FPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLETIPQAIGSLRHLQHL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 146 DLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 205

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR                       +L +R NN+  LP +M  L +L+ LD+  N
Sbjct: 206 GRLVNLR-----------------------ILELRLNNLMTLPKSMVRLINLQRLDIGGN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           E   +PE +    +L ++ I  +F  +R +  +IG L  L+  + + N +  LP      
Sbjct: 243 EFTELPEVVGELKSLRELWI--DFNQIRRVSANIGKLRDLQHFEANGNLLDTLPSELSNW 300

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             + VL +  N LE  P ++
Sbjct: 301 RNVEVLSICSNSLEAFPFSV 320



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 2/224 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ ALP  L     L  L + SNNL ++
Sbjct: 73  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLETI 132

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+A+  + +L+ L 
Sbjct: 133 PQAIGSLRHLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 192

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N  +   LP  
Sbjct: 193 LNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGN--EFTELPEV 250

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +G L+ L EL I  NQIR +  +   L  L+      N L+  P
Sbjct: 251 VGELKSLRELWIDFNQIRRVSANIGKLRDLQHFEANGNLLDTLP 294


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 93/289 (32%), Positives = 169/289 (58%), Gaps = 4/289 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + +  L++L  LD+ +N++ ++P+ +G L +L+KLD+  N++  +P+ +  L 
Sbjct: 49  NKLQSLSEDVKLLAALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSIPEELTQLP 108

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N+++ LP    +LV LEELDL +N+L+ +P S   LI+L +L +  N LE 
Sbjct: 109 HLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLTDIPTSFALLINLVRLNLAGNKLES 168

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    SLR+L    N L+ +P  +  + +LE L +R N ++ LP   SS   L+EL
Sbjct: 169 LPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQLYLRKNKLRSLP-EFSSCKLLKEL 227

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E++  E+L    +L  + + +N   ++++P  I  L+ LE LD++NN I  LP
Sbjct: 228 HAGENQIETLNAENLKQLNSLSVLELRDN--KIKSVPDEITLLQKLERLDLANNDISRLP 285

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            +   LS+L+ L ++ NPL    R++++ G Q +++Y+   ++   + T
Sbjct: 286 YTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDEPSPT 334



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/317 (26%), Positives = 147/317 (46%), Gaps = 51/317 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD------ 156
           + +E LP  I  + SL  LD S+N +  VP+ I  ++SL++L L  N++  LP+      
Sbjct: 164 NKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQLYLRKNKLRSLPEFSSCKL 223

Query: 157 -----------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                            ++  L SL  L+LR N+I ++P  ++ L +LE LDL +N++S 
Sbjct: 224 LKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISR 283

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK------- 252
           LP ++G+L  LK L +E N L  +   + Q  +   L+   ++++  P   G+       
Sbjct: 284 LPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMT 343

Query: 253 -----------IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV-----SFNELESVPESL 296
                      I +L++L         +P  M    ++R   V     S N+L  VP  +
Sbjct: 344 LPSESRVNMHAITSLKLLEYSEKQAAVIPDEM--FDAVRSHPVATANFSKNQLSEVPPRI 401

Query: 297 C-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                ++  +N+G  F  + ++   +  L  L  LDI NN +  LP+    L+RL+++ +
Sbjct: 402 VELKDSVCDVNLG--FNRISSISLELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINL 459

Query: 356 QENPLEVPPRNIVEMGA 372
             N  +V P  +  MGA
Sbjct: 460 SFNRFKVFPSVLYRMGA 476



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 161/371 (43%), Gaps = 50/371 (13%)

Query: 54  FRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIG 113
           +   VP  I  M  + Q    L   KL SL E SS K  ++L+     ++ +    +++ 
Sbjct: 188 YLETVPSKIATMASLEQ--LYLRKNKLRSLPEFSSCKLLKELHAGENQIETLN--AENLK 243

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L+SL  L+L +N+I +VP  I  L  L++LDL  N I  LP ++G+L  L +L L GN 
Sbjct: 244 QLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNP 303

Query: 174 ISA-------------------------------------LP----VALSRLVRLEELDL 192
           +                                       LP    V +  +  L+ L+ 
Sbjct: 304 LRTIRRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMTLPSESRVNMHAITSLKLLEY 363

Query: 193 GSNNLSSLPDSIGSLISLKKLIVET---NDLEELPHTIGQCS-SLRELRVDYNRLKALPE 248
                + +PD +   +    +       N L E+P  I +   S+ ++ + +NR+ ++  
Sbjct: 364 SEKQAAVIPDEMFDAVRSHPVATANFSKNQLSEVPPRIVELKDSVCDVNLGFNRISSISL 423

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +  +H L  L +R N +  LP  M +L+ L+ +++SFN  +  P  L     L  + + 
Sbjct: 424 ELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNRFKVFPSVLYRMGALETILLS 483

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NN       P  + N++ L  LD+ NN +  +P        LR L ++ NP   P   I+
Sbjct: 484 NNQVG-SIDPLQLKNMDKLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAIL 542

Query: 369 EMGAQAVVQYM 379
             G  AV++Y+
Sbjct: 543 AKGTAAVLEYL 553


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 149/272 (54%), Gaps = 4/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SL  L L  NR+ +VP  IG L+SL +LDL  N++  +P  I  L SL YL
Sbjct: 90  VPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYL 149

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++++P  + +L  L EL L +N+L+S+P  I  L +L KL V  N L  +P  I
Sbjct: 150 NLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEI 209

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q +SL EL +  N+L ++P  +G++ +L  LS+  N +  +P  +  + SL +L +  N
Sbjct: 210 WQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGN 269

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +     LV+  +  N   L ++P  IG+L  L EL +  NQ+  +P     L
Sbjct: 270 RLTSLPAEIGQLRALVEFELDRNL--LTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQL 327

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + L  L +  N L   P  + E+ A     YM
Sbjct: 328 TSLGELSLSGNQLTSVPAAMRELEAAGC--YM 357



 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I +L+SL  L L  N++ +VPA IG L+SL+ L L ANR+  +P  IG L SL  L
Sbjct: 67  VPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQL 126

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ++++P  + RL  L  L+L  N L+S+P  I  L SL++L +  N L  +P  I
Sbjct: 127 DLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEI 186

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q ++L +L V  N+L ++P  + ++ +L  L +  N +  +P  +  L+SL  L +  N
Sbjct: 187 WQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDN 246

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +    +LVK+++  N   L +LP  IG L  L E ++  N +  +P     L
Sbjct: 247 QLTSVPAEIGQIRSLVKLSLHGN--RLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHL 304

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
           + L  L +  N L   P  I ++
Sbjct: 305 TSLTELSLHGNQLTSVPSEIGQL 327



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 145/254 (57%), Gaps = 3/254 (1%)

Query: 118 LVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +V L+L E  +  AVPA +G LS+L  L+L  N++  LP  IG L SL  L+L  N++++
Sbjct: 7   VVELELKEFGLTGAVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTS 66

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           +PV + +L  LE L LG N L+S+P  IG L SL+ L +E N L  +P  IGQ +SL +L
Sbjct: 67  VPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQL 126

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  N+L ++P  + ++ +L  L++  N +  +P  +  L+SLREL +S N L SVP  +
Sbjct: 127 DLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEI 186

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                LVK+++  N   L ++P  I  L  L EL +  NQ+  +P     L+ L  L + 
Sbjct: 187 WQLAALVKLSVTEN--QLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLY 244

Query: 357 ENPLEVPPRNIVEM 370
           +N L   P  I ++
Sbjct: 245 DNQLTSVPAEIGQI 258



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 156/274 (56%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L+ L+L  N++  +PA IG L+SL+ L+L  N +  +P  I  L SL  L
Sbjct: 21  VPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGL 80

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  LE+L L +N L+S+P  IG L SL +L +  N L  +P  I
Sbjct: 81  YLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEI 140

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + +SL  L ++ N+L ++P  + ++ +L  L +  N++  +P  +  L++L +L V+ N
Sbjct: 141 WRLTSLTYLNLNDNQLTSVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTEN 200

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L ++ +  N   L ++P  IG L  L  L + +NQ+  +P     +
Sbjct: 201 QLTSVPAEIWQLTSLTELYLHGN--QLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQI 258

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             L  L +  N L   P  I ++  +A+V++  D
Sbjct: 259 RSLVKLSLHGNRLTSLPAEIGQL--RALVEFELD 290


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  149 bits (376), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 147/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L +L  LDL+ N++ A+P  I  L  L+ L L  N++  LP  I  L 
Sbjct: 50  NQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKDIEHLK 109

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ++ LP  +  L  L+EL L  N L++LP  IG L  L+ L +  N L  
Sbjct: 110 ELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTT 169

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L+ L +  N+L  LP+ +G +  L+VL +  N +  LP  +  L +L+ L
Sbjct: 170 LPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVL 229

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           +++ N+L+++P+ +     L  +N+ +N   L  LP  IG L+ L+EL ++NNQ+  LP 
Sbjct: 230 ELTNNQLKTLPKEIGQLQNLQVLNLSHN--KLTTLPNDIGKLQNLQELYLTNNQLTTLPK 287

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L++L +  N L+  P+ I ++
Sbjct: 288 DIGYLKELQILELTNNQLKTLPKEIGQL 315



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I  L  L  L L  N++  +P  I  L  L++L L  N++  LP  IG L  L  L
Sbjct: 101 LPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVL 160

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  +  L  L+ L L  N L++LP  IG L  L+ L +  N L  LP  I
Sbjct: 161 HLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEI 220

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+LK LP+ +G++  L+VL++ +N +  LP  +  L +L+EL ++ N
Sbjct: 221 GKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNN 280

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ + +   L  + + NN   L+ LP+ IG L+ L+ L++S+N++  LP     L
Sbjct: 281 QLTTLPKDIGYLKELQILELTNN--QLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKL 338

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L   P++I
Sbjct: 339 QNLQELYLTNNQLTTLPKDI 358



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 141/257 (54%), Gaps = 2/257 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  I  L  L  L L  N++  +P  IG L  L+ L L+ N++  LP  IG L 
Sbjct: 119 NQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLK 178

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  NQ++ LP  +  L  L+ L L  N L++LP  IG L +L+ L +  N L+ 
Sbjct: 179 ELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKT 238

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L + +N+L  LP  +GK+  L+ L +  N +  LP  +  L  L+ L
Sbjct: 239 LPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQIL 298

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           +++ N+L+++P+ +     L  +N+ +N   L  LP+ IG L+ L+EL ++NNQ+  LP 
Sbjct: 299 ELTNNQLKTLPKEIGQLQNLQVLNLSHN--KLTTLPKDIGKLQNLQELYLTNNQLTTLPK 356

Query: 343 SFRMLSRLRVLRVQENP 359
               L  L++L + + P
Sbjct: 357 DIGYLKELQILHLDDIP 373



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 127/224 (56%), Gaps = 2/224 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  IG L +L  LDL  NQ++ALP  +  L  L+ L L  N L+SLP  
Sbjct: 45  LDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKD 104

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L  L++L ++ N L  LP  I     L+EL +DYN+L  LP+ +G +  L+VL +  
Sbjct: 105 IEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYD 164

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L  L+ L +  N+L ++P+ + +   L  +++ +N   L  LP+ IG 
Sbjct: 165 NQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDN--QLTTLPKEIGK 222

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L+ L+++NNQ++ LP     L  L+VL +  N L   P +I
Sbjct: 223 LQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDI 266



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 72/199 (36%), Positives = 118/199 (59%), Gaps = 1/199 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IG L  L  L L +N++  +P  IG L  L+ L L+ N++  LP  IG
Sbjct: 162 LYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIG 221

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L  NQ+  LP  + +L  L+ L+L  N L++LP+ IG L +L++L +  N 
Sbjct: 222 KLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQELYLTNNQ 281

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP  IG    L+ L +  N+LK LP+ +G++  L+VL++ +N +  LP  +  L +L
Sbjct: 282 LTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNL 341

Query: 280 RELDVSFNELESVPESLCF 298
           +EL ++ N+L ++P+ + +
Sbjct: 342 QELYLTNNQLTTLPKDIGY 360



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 104/188 (55%), Gaps = 2/188 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL SN L++LP  IG L +L+ L +  N L  LP  I     L+ L + +N+L +LP+ 
Sbjct: 45  LDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKLTSLPKD 104

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +  +  L+ L + YN +  LP  +  L  L+EL + +N+L ++P+ + +   L  +++ +
Sbjct: 105 IEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKELQVLHLYD 164

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L  LP+ IG L+ L+ L + +NQ+  LP     L  L+VL + +N L   P+ I +
Sbjct: 165 N--QLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGK 222

Query: 370 MGAQAVVQ 377
           +    V++
Sbjct: 223 LQNLQVLE 230


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 143/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 52  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 111

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 112 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 171

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +   
Sbjct: 172 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 231

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L ++ N 
Sbjct: 232 QNLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 289

Query: 360 LEVPPRNIVEM 370
           L + P+ I ++
Sbjct: 290 LTIFPKEIGQL 300



 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 89  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 146 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 206 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L   P+ +     L  +++G+N   L  LP  IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 165/312 (52%), Gaps = 8/312 (2%)

Query: 60  IMIMCMCCV-GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSL 118
            +I   C +  ++ E  +   LA  ++   K  T DL+      +  + LP  IGKL +L
Sbjct: 19  FLIHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLS-----ANRFKTLPKEIGKLKNL 73

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L L  NQ++ LP
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLP 133

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I +   L+ L +
Sbjct: 134 QEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGL 193

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N+L  +P  +  
Sbjct: 194 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 253

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +N+ NN   L  L + I  L+ L+ LD+ +NQ+ + P     L  L+VL +  N
Sbjct: 254 LKNLQTLNLRNN--RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN 311

Query: 359 PLEVPPRNIVEM 370
            L   P  I ++
Sbjct: 312 QLTTLPEGIGQL 323



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 158 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 275 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 335 QLTTLPQEIGQLQNLQELFLNNNQLSS 361


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/263 (36%), Positives = 146/263 (55%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D I  LP +IG+   L  L LS+NR+ ++P  I   + ++ L L  NRI ELP  IG L 
Sbjct: 236 DLINSLPANIGRCEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLT 295

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ++ LPV +  L  LE++ L  N L  +P  I +L SL  L V  N L  
Sbjct: 296 SLKELHLAWNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPS 355

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IG   +L E R  +N+++A+P ++G++  L++L    N +  LP ++  L+SL  L
Sbjct: 356 LPNEIGDLDNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHL 415

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D++ N LE++P ++   T L K+ +  N   L  LP ++G L  LE LD+  N++  LP 
Sbjct: 416 DLAVNNLEALPGTIGNLTALKKLLLYRN--KLTILPLTVGKLTNLETLDLQTNRLTSLPP 473

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
               L  L    + +N L ++PP
Sbjct: 474 GVGNLKNLMKFNLIQNALVKLPP 496



 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/283 (35%), Positives = 162/283 (57%), Gaps = 8/283 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR--IVAVPATIGGLSSLK 142
           E+   +   +L LQN   +++E +P  +GKLS L +L L  N+  I ++PA IG    LK
Sbjct: 196 EIGDLENLIELTLQN---NSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLK 252

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +L L  NR+  +P  I     +  L L GN+I  LP  +  L  L+EL L  N L++LP 
Sbjct: 253 ELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPV 312

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG+L +L+K+++  N L+ +P  I   +SL  L V  NRL +LP  +G +  LE     
Sbjct: 313 EIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTH 372

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           +N I+ +P+++  L  L+ LD S N+L ++P+S+   T+L  +++  N  +L ALP +IG
Sbjct: 373 HNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVN--NLEALPGTIG 430

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           NL  L++L +  N++ +LP +   L+ L  L +Q N L  +PP
Sbjct: 431 NLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPP 473



 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 100/263 (38%), Positives = 149/263 (56%), Gaps = 26/263 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG L++L  + LS NR+  +P  I  L+SL  L++  NR+  LP+ IGDL 
Sbjct: 305 NQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLD 364

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L       NQI A+P ++ RL++L+ LD   N L++LPDSIG L SL  L +  N+LE 
Sbjct: 365 NLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEA 424

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TIG  ++L++L +  N+L  LP  VGK+  LE L ++ N +  LP  + +L +L   
Sbjct: 425 LPGTIGNLTALKKLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNL--- 481

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            + FN +++          LVK            LP SIG+LE L +L +  NQ+ +LP 
Sbjct: 482 -MKFNLIQNA---------LVK------------LPPSIGSLESLTQLSLRENQLAILPA 519

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
           S  ML  L++L +  N L E+PP
Sbjct: 520 SMNMLFNLQILSLSANRLYELPP 542



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 97/295 (32%), Positives = 152/295 (51%), Gaps = 38/295 (12%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+  L+ +  ++ +P  I  L+SL  L++ +NR+ ++P  IG L +L++   H N+I  
Sbjct: 319 NLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQA 378

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P SIG LL L  LD   NQ++ LP ++  L  L  LDL  NNL +LP +IG+L +LKKL
Sbjct: 379 IPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKL 438

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           ++  N L  LP T+G+ ++L  L +  NRL +LP  VG +  L   ++  N + +LP ++
Sbjct: 439 LLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSI 498

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN----------------------- 310
            SL SL +L +  N+L  +P S+     L  +++  N                       
Sbjct: 499 GSLESLTQLSLRENQLAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQVCQDLPQ 558

Query: 311 -----------FAD--LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                       +D  L  LP  IGN   L +L +SNNQ++ LP +      LRV
Sbjct: 559 KSLTPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQLKELPATIGASCILRV 613



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 178/392 (45%), Gaps = 95/392 (24%)

Query: 73  EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVP 132
           +K +++ L  L + +  K T  L+L     + + ++P  + ++++L  L L +N +  +P
Sbjct: 27  DKGAVVILDYLRKFNRAKWTAKLDLS---CNGLTFVPIEVVRMTNLTQLKLFKNNLTNLP 83

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSL---------------------------- 164
           + IGGL  L  L +  N+I  LP  +G LL+L                            
Sbjct: 84  SAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKA 143

Query: 165 ------------VYLDLR--GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
                         LDLR   NQ+ +LP  +  +  L +L L  N L ++P  IG L +L
Sbjct: 144 DNNSITHLIPEFGKLDLRLSNNQLESLPTEMGSMTSLTQLKLPFNLLKTVPKEIGDLENL 203

Query: 211 KKLIVETNDLE-------------------------ELPHTIGQCSSLRELRVDYNRLKA 245
            +L ++ N LE                          LP  IG+C  L+EL +  NRL +
Sbjct: 204 IELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTS 263

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP---------ESL 296
           +P  +     +EVL +  N I++LP  + +L+SL+EL +++N+L ++P         E +
Sbjct: 264 MPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKM 323

Query: 297 CFA--------------TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
             +              T+L  +N+G N   L +LP  IG+L+ LEE    +NQI+ +P 
Sbjct: 324 LLSHNRLQRIPVEIQNLTSLTYLNVGKN--RLPSLPNEIGDLDNLEEFRTHHNQIQAIPS 381

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
           S   L +L++L   EN L   P +I E+ + A
Sbjct: 382 SIGRLLKLKILDASENQLTTLPDSIGELTSLA 413


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  149 bits (375), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/262 (37%), Positives = 150/262 (57%), Gaps = 2/262 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP SIG+L +L  LDL   ++  +P  +G L +L+ L+L AN++ ELP SIG L +L
Sbjct: 117 IKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQAL 176

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
              DL  N++  LP   S+L +LEEL L +N LS LP + G L +LK L +  N L++LP
Sbjct: 177 KMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLP 236

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            ++GQ   L  L +  N L  +P  +G++ +L  L +  N I+QLP  +  L +L+ L +
Sbjct: 237 ASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFI 296

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + NEL  +P        L ++ +  N   L ALP + G L  LEEL +S N++  LP S 
Sbjct: 297 TENELSQLPPEFAQLKNLQELQLQEN--KLIALPINFGKLSQLEELQLSENKLEALPKSI 354

Query: 345 RMLSRLRVLRVQENPLEVPPRN 366
           + L +L  L +  N + + P+N
Sbjct: 355 KRLKKLSSLNLGNNEIYLFPKN 376



 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP+ IG+L +L  L L+   I  +PA+IG L +L+ LDL   ++ ELP+ +G L +L
Sbjct: 94  LEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQELPEELGQLQNL 153

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  NQ+  LP ++ +L  L+  DL SN L  LP+    L  L++L +  N L  LP
Sbjct: 154 EALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLSFLP 213

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
              GQ  +L+ L++  N+L  LP ++G++  LE+L ++ N++ Q+P  +  L SL ELD+
Sbjct: 214 SNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSLVELDL 273

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N ++ +P  +     L  + I  N  +L  LP     L+ L+EL +  N++  LP +F
Sbjct: 274 SDNFIQQLPPEIGQLQALKSLFITEN--ELSQLPPEFAQLKNLQELQLQENKLIALPINF 331

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             LS+L  L++ EN LE  P++I
Sbjct: 332 GKLSQLEELQLSENKLEALPKSI 354



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/249 (36%), Positives = 137/249 (55%), Gaps = 9/249 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIE-LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           PA IG  S L+ L L     +E LP+ IG L +L  L L    I  LP ++ +L  L+ L
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           DLG+  L  LP+ +G L +L+ L +  N LEELP +IGQ  +L+   +  NRL+ LP   
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEF 193

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            ++  LE L++  N +  LP+    L +L+ L +S N+L+ +P SL     L  + + +N
Sbjct: 194 SQLTQLEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDN 253

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP----- 364
             DL  +P  IG L+ L ELD+S+N I+ LP     L  L+ L + EN L ++PP     
Sbjct: 254 --DLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQL 311

Query: 365 RNIVEMGAQ 373
           +N+ E+  Q
Sbjct: 312 KNLQELQLQ 320



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 147/269 (54%), Gaps = 5/269 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E S      +L L N L+    +LP + G+L +L +L LSEN++  +PA++G L  L+ L
Sbjct: 192 EFSQLTQLEELALANNLLS---FLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELL 248

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N + ++P  IG L SLV LDL  N I  LP  + +L  L+ L +  N LS LP   
Sbjct: 249 ELQDNDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEF 308

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L++L ++ N L  LP   G+ S L EL++  N+L+ALP+++ ++  L  L++  N
Sbjct: 309 AQLKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNN 368

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I   P    ++ +L  LD+  N +E +PE +     L  + + +N  +LR LP  + +L
Sbjct: 369 EIYLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDN--ELRNLPPYLQDL 426

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  L+IS+N+    P+    + +L  L
Sbjct: 427 TALRRLEISDNEFETFPEVLYQMRQLNDL 455



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 3/155 (1%)

Query: 224 PHTIGQCSSLRELRV-DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           P  IGQ S LR L +     L+ LPE +G++  LEVL +    IK+LP ++  L +L+ L
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+   +L+ +PE L     L  +N+  N   L  LP SIG L+ L+  D+S+N+++ LP+
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSAN--QLEELPPSIGQLQALKMADLSSNRLQELPN 191

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
            F  L++L  L +  N L   P N  ++ A   +Q
Sbjct: 192 EFSQLTQLEELALANNLLSFLPSNFGQLQALKTLQ 226


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 90  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 146

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 147 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 206

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 207 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 266

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L   P+ +     L  +++G+N   L  LP  IG L
Sbjct: 267 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 324

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 325 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 360



 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 143/251 (56%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 113 EIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ LD+S N L ++P+ +   
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHL 232

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP  IG L+ L+ L++ NN++  L      L  L+ L ++ N 
Sbjct: 233 QNLQDLYLVSN--QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQ 290

Query: 360 LEVPPRNIVEM 370
           L + P+ I ++
Sbjct: 291 LTIFPKEIGQL 301



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L  L
Sbjct: 64  LPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 123

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I
Sbjct: 124 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 183

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N
Sbjct: 184 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 243

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P  +     L  +N+ NN   L  L + I  L+ L+ LD+ +NQ+ + P     L
Sbjct: 244 QLTILPNEIGQLKNLQTLNLRNN--RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQL 301

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+VL +  N L   P  I ++
Sbjct: 302 KNLQVLDLGSNQLTTLPEGIGQL 324



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 153/286 (53%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+LS N+I  +P  I  L  L+ L
Sbjct: 67  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 123

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L  L +L L  NQ++ LP  + +L  L+ L+L  N + ++P  I
Sbjct: 124 YLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 183

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L+ L ++ N L  LP  IGQ  +L+ L +  NRL  LP+ +G +  L+ L +  N
Sbjct: 184 EKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSN 243

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ L++  N L ++ + +     L  +++ +N   L   P+ IG L
Sbjct: 244 QLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN--QLTIFPKEIGQL 301

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 302 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 347



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/231 (32%), Positives = 129/231 (55%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++ LDL ANR   LP  IG L +L  L+L  NQ++ LP  + +L  L +L+L +N + +
Sbjct: 50  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 109

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P  I  L  L+ L +  N L  LP  IGQ   L+ L +  N+L  LP+ +G++  L+ L
Sbjct: 110 IPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 169

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++ YN IK +P  +  L  L+ L +  N+L ++P+ +     L  +++  N   L  LP+
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTN--RLTTLPQ 227

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG+L+ L++L + +NQ+ +LP+    L  L+ L ++ N L    + I ++
Sbjct: 228 EIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 278



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 159 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 215

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 216 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 275

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 276 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 335

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 336 QLTTLPQEIGQLQNLQELFLNNNQLSS 362



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 121/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 40  DLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 99

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 100 LNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 159

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++S+N+++++P+ +     L  + + NN   L  LP+ IG L+ L+ LD+
Sbjct: 160 IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNN--QLTTLPQEIGQLQNLQSLDL 217

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S N++  LP     L  L+ L +  N L + P  I ++
Sbjct: 218 STNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQL 255



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 94/173 (54%), Gaps = 2/173 (1%)

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           + L  ++ + + ++ L +  N  + LP  IG+  +L+EL ++ N+L  LP+ +G++  L 
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 98

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L++  N IK +P  +  L  L+ L +  N+L ++P+ +     L  + +  N   L  L
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKN--QLTTL 156

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ L+ L++S NQI+ +P     L +L+ L +  N L   P+ I ++
Sbjct: 157 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL 209


>gi|348532295|ref|XP_003453642.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Oreochromis niloticus]
          Length = 1027

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/281 (34%), Positives = 149/281 (53%), Gaps = 2/281 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+L  L  L +S N+I  +PA IG L SL++LD+  N + + P S   L  L  L
Sbjct: 130 LPEGVGQLRGLKKLCISHNKIQHLPAQIGALQSLEELDMSFNDLHDFPRSFSGLARLRTL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D   N+++  P  +  L  LEELD   N    LP  +  L S+K L + +  +  LPHT 
Sbjct: 190 DADHNKLNQFPPEIMALGELEELDCSGNKFEVLPADVWKLQSIKILWLSSLHMSSLPHTF 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L  L +D N L  LP + G + +L+++++  N+ +  P  + S+  L EL +S N
Sbjct: 250 CHLQHLESLMLDGNHLTELPPSFGNLQSLKMINLSSNDFENFPQVILSIMGLEELYLSRN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +PE +     LV + + NN   +  LP SI  LE LEEL +  NQI +LPD+F  L
Sbjct: 310 RLIHIPEEIGQLGKLVNLWLDNN--SITYLPDSIVELENLEELVLQGNQIAILPDNFGKL 367

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           S++ + +V++NPL  PP  +   G   +  Y  +L   + A
Sbjct: 368 SKVNIWKVKDNPLIQPPYEVCMKGIPYIAVYQKELAHSQFA 408



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 95/168 (56%), Gaps = 3/168 (1%)

Query: 187 LEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           +E L+LG+N+L  LPD +G SL +L+ L++  N    +P  + +   L EL + +N L++
Sbjct: 70  IEALNLGNNSLQELPDGLGSSLNNLRVLVLRRNKFSSVPRVVFELGRLVELDMSHNCLRS 129

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LPE VG++  L+ L + +N I+ LP  + +L SL ELD+SFN+L   P S      L  +
Sbjct: 130 LPEGVGQLRGLKKLCISHNKIQHLPAQIGALQSLEELDMSFNDLHDFPRSFSGLARLRTL 189

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +  +N   L   P  I  L  LEELD S N+  VLP     L  +++L
Sbjct: 190 DADHN--KLNQFPPEIMALGELEELDCSGNKFEVLPADVWKLQSIKIL 235



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/102 (36%), Positives = 52/102 (50%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++ E  P  I  +  L  L LS NR++ +P  IG L  L  L L  N I  LPDSI +L 
Sbjct: 286 NDFENFPQVILSIMGLEELYLSRNRLIHIPEEIGQLGKLVNLWLDNNSITYLPDSIVELE 345

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  L L+GNQI+ LP    +L ++    +  N L   P  +
Sbjct: 346 NLEELVLQGNQIAILPDNFGKLSKVNIWKVKDNPLIQPPYEV 387


>gi|301771802|ref|XP_002921342.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1-like [Ailuropoda
           melanoleuca]
          Length = 1042

 Score =  149 bits (375), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 105/286 (36%), Positives = 160/286 (55%), Gaps = 12/286 (4%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  L  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  LD+  
Sbjct: 126 VSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLFRLRTLDVDH 185

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ++A P  L +L  LEELD+ SN L  LP+ I +L +LK L +   +L  LP    + +
Sbjct: 186 NQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELA 245

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            L     D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+L S
Sbjct: 246 XL-----DNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTS 300

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   + L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LSR+ 
Sbjct: 301 VPSLISGLSRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVG 358

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 359 LWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 399



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/188 (36%), Positives = 104/188 (55%), Gaps = 5/188 (2%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +PD +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 60  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 119

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  L  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL     L 
Sbjct: 120 ALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLFRLR 179

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++ +N   L A PR +  L  LEELD+S+N++R LP+    L  L++L +    L   
Sbjct: 180 TLDVDHN--QLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 237

Query: 364 PRNIVEMG 371
           P    E+ 
Sbjct: 238 PSGFCELA 245



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/110 (39%), Positives = 59/110 (53%), Gaps = 3/110 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL + L +     P ++  L+ L  L LS N++ +VP+ I GLS L  L L  NRI  L
Sbjct: 268 LNLSSNLFEE---FPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLWLDNNRIRYL 324

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           PDSI +L  L  L L+GNQI+ LP    +L R+    +  N L   P  +
Sbjct: 325 PDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 374



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 64/125 (51%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP     L  L  L+LS N     PA +  L+ L++L L  N++  +P  I  L 
Sbjct: 250 NGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLS 309

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L+ L L  N+I  LP ++  L  LEEL L  N ++ LPD+ G L  +    ++ N L +
Sbjct: 310 RLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQ 369

Query: 223 LPHTI 227
            P+ +
Sbjct: 370 PPYEV 374


>gi|357449671|ref|XP_003595112.1| Leucine-rich repeat-containing protein [Medicago truncatula]
 gi|355484160|gb|AES65363.1| Leucine-rich repeat-containing protein [Medicago truncatula]
          Length = 353

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 103/262 (39%), Positives = 149/262 (56%), Gaps = 5/262 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSLPD 202
           +DLH   +  LP    DL  +  L+L  N +  +P +L+ RL+ LE LD+ SN L SLP+
Sbjct: 47  VDLHGMSLDSLPKLSLDLAIISKLNLSNNNLQNIPESLTARLLNLEMLDVHSNQLRSLPN 106

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSV 261
           SIG L  LK L V  N ++ LP TI  C +L EL +++N L  LP+ +G ++  L+ L+V
Sbjct: 107 SIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFELIKLKKLAV 166

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +  LP + S + +L  LDV  N L S+P+ L     L  +N+  NF  L +LP SI
Sbjct: 167 NSNKLVCLPRSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRYLESLPYSI 226

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L  L ELD+S N I+ LPDS   L +L+ L V+ NPL  PP+ +VE G   V +YM +
Sbjct: 227 GLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLISPPQEVVEQGLHVVKEYMCN 286

Query: 382 LVEKRDAKTQPVKQKKSWVEMC 403
              K ++      +K+ W+  C
Sbjct: 287 ---KMNSSHHIPTKKRWWMVKC 305



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 105/165 (63%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + +  LP+SIG LS L  L++S N I ++PATI    +L++L+L+ N + +LPD+IG +L
Sbjct: 99  NQLRSLPNSIGCLSKLKVLNVSGNFIQSLPATIENCRALEELNLNFNMLSKLPDTIGFEL 158

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
           + L  L +  N++  LP + S ++ L  LD+  N L SLPD + +L++L+ L V  N   
Sbjct: 159 IKLKKLAVNSNKLVCLPRSTSHMMTLMVLDVRLNCLRSLPDDLENLVNLETLNVSQNFRY 218

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           LE LP++IG   SL EL V YN +K LP+++G +  L+ LSV  N
Sbjct: 219 LESLPYSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGN 263



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           +E LP SIG L SLV LD+S N I  +P +IG L  L+KL +  N +I  P  +
Sbjct: 219 LESLPYSIGLLLSLVELDVSYNNIKTLPDSIGCLQKLQKLSVEGNPLISPPQEV 272


>gi|189533883|ref|XP_001335202.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Danio rerio]
          Length = 992

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 95/279 (34%), Positives = 147/279 (52%), Gaps = 2/279 (0%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + I  L  L  L  S N+I  +P+ IG L SL++LD+  N + + P S   L  L  LD+
Sbjct: 111 EDIDLLKGLKKLCFSHNKIQYLPSQIGTLQSLEELDISFNELHDFPRSFSQLRKLRTLDV 170

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             N++   P  +  L  LEELD   N L  LP +I  L S+K L + +  L  LP T  +
Sbjct: 171 DHNKLQRFPSEILALSDLEELDCSGNKLEGLPGNIMMLQSIKILWLSSTHLLSLPETFCE 230

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L  L +D N L  LP++ GK+  L++L++  N+ +  P  +  L+ L EL +S N+L
Sbjct: 231 LQNLESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLTRLEELYLSRNKL 290

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
             +PE +     L  + + NN   +  LP SI  L  LEEL +  NQI +LPD+F  L++
Sbjct: 291 TFLPEEVGQLCNLANLWLDNN--SITFLPDSIVELGKLEELVLQGNQIAILPDNFGKLAK 348

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           + + +V++NPL  PP  +   G   +  Y  +L   + A
Sbjct: 349 VNIWKVKDNPLIQPPYEVCMKGIPYIAAYQKELAHSQPA 387



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 139/279 (49%), Gaps = 7/279 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG-LSSLKKLDLHANRI 151
           R L L  K    I  LP+ I ++  L   +L  N +  +P  +G  L+ L+ L L  N+ 
Sbjct: 28  RQLTLSTKNSQKIT-LPEDIKEIEVL---NLGNNSLQELPEGLGSTLTKLRILILRRNKF 83

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             +P ++  L  LV LD+  N ++     +  L  L++L    N +  LP  IG+L SL+
Sbjct: 84  AIVPSAVFQLSQLVELDISHNCLNHFSEDIDLLKGLKKLCFSHNKIQYLPSQIGTLQSLE 143

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N+L + P +  Q   LR L VD+N+L+  P  +  +  LE L    N ++ LP 
Sbjct: 144 ELDISFNELHDFPRSFSQLRKLRTLDVDHNKLQRFPSEILALSDLEELDCSGNKLEGLPG 203

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L S++ L +S   L S+PE+ C    L  + + NNF  L  LP+S G L+ L+ L+
Sbjct: 204 NIMMLQSIKILWLSSTHLLSLPETFCELQNLESLMLDNNF--LTRLPQSFGKLQKLKMLN 261

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +S+N     P     L+RL  L +  N L   P  + ++
Sbjct: 262 LSSNSFEDFPQVIIKLTRLEELYLSRNKLTFLPEEVGQL 300



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           + L + N   ++ E  P  I KL+ L  L LS N++  +P  +G L +L  L L  N I 
Sbjct: 255 QKLKMLNLSSNSFEDFPQVIIKLTRLEELYLSRNKLTFLPEEVGQLCNLANLWLDNNSIT 314

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            LPDSI +L  L  L L+GNQI+ LP    +L ++    +  N L   P  +
Sbjct: 315 FLPDSIVELGKLEELVLQGNQIAILPDNFGKLAKVNIWKVKDNPLIQPPYEV 366


>gi|15224761|ref|NP_179523.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
 gi|3135263|gb|AAC16463.1| putative leucine-rich-repeat protein [Arabidopsis thaliana]
 gi|57868154|gb|AAW57415.1| plant intracellular Ras-group-related LRR protein 6 [Arabidopsis
           thaliana]
 gi|330251775|gb|AEC06869.1| ras group-related protein LRR 6 [Arabidopsis thaliana]
          Length = 380

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 148/261 (56%), Gaps = 4/261 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ ++L    +  LP+   +L  +  LDL  N +  +P +L+ RL+ L  LD+ SN + +
Sbjct: 62  LEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKA 121

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N L   P +I  C SL EL  ++N+L  LP+++G ++  L  
Sbjct: 122 LPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRK 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LP +++ L+SLR LD   N L  +P+ L     L  +N+  NF  L ALP
Sbjct: 182 LSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALP 241

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD+S N+I VLP+S   + RLR L V+ NPL  PP  ++E   Q V +Y
Sbjct: 242 SSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPPIEVMEQNLQVVREY 301

Query: 379 MADLVEKRDAKTQPVKQKKSW 399
           +   +     ++ P K KKSW
Sbjct: 302 LTQKMNGGSPRS-PSK-KKSW 320



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 122/210 (58%), Gaps = 4/210 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG-LSSLKKLDLHANRIIELPDSIGDLLS 163
           +E LP+    L+ +  LDLS N +  +P ++   L +L  LD+H+N+I  LP+SIG L  
Sbjct: 72  LESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKALPNSIGCLSK 131

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEE 222
           L  L++ GN + + P ++     LEEL+   N L  LPDSIG  L +L+KL + +N L  
Sbjct: 132 LKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRKLSINSNKLIS 191

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN--NIKQLPTTMSSLSSLR 280
           LP +I   +SLR L    N L  LP+ +  +  LE+L+V  N   +  LP+++  L +L 
Sbjct: 192 LPISITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALPSSIGLLMNLI 251

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNN 310
           ELDVS+N++  +PES+     L K+++  N
Sbjct: 252 ELDVSYNKITVLPESIGCMRRLRKLSVEGN 281



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + I+ LP+SIG LS L +L++S N +V+ P +I    SL++L+ + N++I LPDSIG +L
Sbjct: 117 NQIKALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFEL 176

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N++ +LP++++ L  L  LD   N L  LPD + +LI+L+ L V  N   
Sbjct: 177 TNLRKLSINSNKLISLPISITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQY 236

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           L  LP +IG   +L EL V YN++  LPE++G +  L  LSV  N
Sbjct: 237 LSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGN 281



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 2/76 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LPD +  L +L  L++S+N   + A+P++IG L +L +LD+  N+I  LP+SIG +  L 
Sbjct: 215 LPDDLENLINLEILNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLR 274

Query: 166 YLDLRGNQISALPVAL 181
            L + GN + + P+ +
Sbjct: 275 KLSVEGNPLVSPPIEV 290


>gi|224052809|ref|XP_002197870.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Taeniopygia guttata]
          Length = 582

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   L+EL+L +NN+S+LP+ +  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +LV+L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQCLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLS 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LPE +G + +L  L +RYN +  +P +++  S L EL
Sbjct: 253 LPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  L VL
Sbjct: 373 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVL 430

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 431 ILSNNLLKKLPHGI 444



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 156/294 (53%), Gaps = 40/294 (13%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++ 
Sbjct: 311 ELNLEN---NNISTLPE--GLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNME 363

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 423

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL+ LI+  N L++LPH IG    LREL ++ N+L++LP  +                
Sbjct: 424 LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEI---------------- 467

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
                  + L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE 
Sbjct: 468 -------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLEN 518

Query: 327 LEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 519 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 43.1 bits (100), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+ +  L+ L EL +  N+L+ +P  +     LV + +  N   L +LP S+ NL+
Sbjct: 112 IHLLPSAIKELTQLTELYLYSNKLQCLPAEVGCLVNLVTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     LS L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDI 211


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+LS N+I  +P  I  L  L+ L
Sbjct: 66  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 123 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 183 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L   P+ +     L  +++G+N   L  LP  IG L
Sbjct: 243 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 300

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 301 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 336



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 168/322 (52%), Gaps = 12/322 (3%)

Query: 54  FRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWL 108
           +  K+ I +  + C       ++ E  +   LA  ++   K  T DL+      +  + L
Sbjct: 9   YLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLS-----ANRFKTL 63

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L +L 
Sbjct: 64  PKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLY 123

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQ++ LP  + +L  L+ L+L  N + ++P  I  L  L+ L ++ N L  LP  IG
Sbjct: 124 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 183

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+ L +  NRL  LP+ +G +  L+ L +  N +  LP  +  L +L+ L++  N 
Sbjct: 184 QLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNR 243

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L ++ + +     L  +++ +N   L   P+ IG L+ L+ LD+ +NQ+  LP+    L 
Sbjct: 244 LTTLSKEIEQLQNLKSLDLRSN--QLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 301

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
            L+ L +  N L   P+ I ++
Sbjct: 302 NLQTLDLDSNQLTTLPQEIGQL 323



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 135 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 192 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 252 EQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 312 QLTTLPQEIGQLQNLQELFLNNNQLSS 338


>gi|168045665|ref|XP_001775297.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673378|gb|EDQ59902.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 349

 Score =  148 bits (374), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 104/308 (33%), Positives = 165/308 (53%), Gaps = 13/308 (4%)

Query: 78  IKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           ++L   I  +S +         K + NI   P S+  ++ L SL+LS N++  VP+ IG 
Sbjct: 47  VELEKTIASASTEKLEHFEFCGKELKNI---PRSLMSITCLSSLNLSNNQLEVVPSEIGD 103

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L  L++H+N++  LP+SIG+L  L  L++ GN + ALP  LS     + L  G    
Sbjct: 104 LVNLVALNVHSNKLKSLPESIGNLSKLKILNVSGNLLKALPENLSSCRYAQTLFCGF--- 160

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTL 256
                 + S+ S KK+      L +    +  CS L EL  ++N+L+      G K+  L
Sbjct: 161 ------MFSVTSTKKIARFLRILPQFLIVLIVCSELVELNANFNQLETWMPVFGWKLVKL 214

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L  ++NN+  LP +   L  L+ LD+  N L  +P S+   + L  +++  NF++L  
Sbjct: 215 RKLEFQFNNLVGLPESFGHLKELKHLDLRNNHLRGLPLSIGSLSHLETLDLSRNFSNLCT 274

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP +IGNL  L  LD+S NQIR LP +   L  L+ L + +NPL VPP+ ++E   +AV+
Sbjct: 275 LPDTIGNLASLLTLDLSFNQIRELPPALGKLKNLKNLMLDQNPLVVPPKRVIEHSQEAVL 334

Query: 377 QYMADLVE 384
            Y+ DL+E
Sbjct: 335 AYLLDLLE 342


>gi|326923993|ref|XP_003208217.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Meleagris
           gallopavo]
          Length = 582

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   L+EL+L +NN+S+LP+ +  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 148/314 (47%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLT 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LPE +G + +L  L +RYN +  +P +++  S L EL
Sbjct: 253 LPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  L VL
Sbjct: 373 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVL 430

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 431 ILSNNLLKKLPHGI 444



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 156/294 (53%), Gaps = 40/294 (13%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++ 
Sbjct: 311 ELNLEN---NNISTLPE--GLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNME 363

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 423

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL+ LI+  N L++LPH IG    LREL ++ N+L++LP  +                
Sbjct: 424 LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEI---------------- 467

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
                  + L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE 
Sbjct: 468 -------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLEN 518

Query: 327 LEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 519 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+ +  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L+ L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDI 211


>gi|297836332|ref|XP_002886048.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
 gi|297331888|gb|EFH62307.1| leucine-rich repeat family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 377

 Score =  148 bits (374), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 148/261 (56%), Gaps = 4/261 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ ++L    +  LP+   +L  +  LDL  N +  +P +L+ RL+ L  LD+ SN + +
Sbjct: 59  LEVVNLSGMALESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKA 118

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEV 258
           LP+SIG L  LK L V  N L   P +I  C SL EL  ++N+L  LP+++G ++  L  
Sbjct: 119 LPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRK 178

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LP +++ L+SLR LD   N L  +P+ L     L  +N+  NF  L ALP
Sbjct: 179 LSINSNKLISLPLSITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALP 238

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L  L ELD+S N+I VLP+S   + RLR L V+ NPL  PP  ++E   Q V +Y
Sbjct: 239 SSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGNPLVSPPIEVMEQNLQVVREY 298

Query: 379 MADLVEKRDAKTQPVKQKKSW 399
           +   +     ++ P K KKSW
Sbjct: 299 LTQKMNGGSPRS-PSK-KKSW 317



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 122/210 (58%), Gaps = 4/210 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG-LSSLKKLDLHANRIIELPDSIGDLLS 163
           +E LP+    L+ +  LDLS N +  +P ++   L +L  LD+H+N+I  LP+SIG L  
Sbjct: 69  LESLPNPSLNLAQICKLDLSNNHLQTIPESLTARLLNLIALDVHSNQIKALPNSIGCLSK 128

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG-SLISLKKLIVETNDLEE 222
           L  L++ GN + + P ++     LEEL+   N L  LPDSIG  L +L+KL + +N L  
Sbjct: 129 LKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFELTNLRKLSINSNKLIS 188

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN--NIKQLPTTMSSLSSLR 280
           LP +I   +SLR L    N L  LP+ +  +  LE+L+V  N   +  LP+++  L +L 
Sbjct: 189 LPLSITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQYLSALPSSIGLLMNLI 248

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNN 310
           ELDVS+N++  +PES+     L K+++  N
Sbjct: 249 ELDVSYNKITVLPESIGCMRRLRKLSVEGN 278



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 103/165 (62%), Gaps = 3/165 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-DL 161
           + I+ LP+SIG LS L +L++S N +V+ P +I    SL++L+ + N++I LPDSIG +L
Sbjct: 114 NQIKALPNSIGCLSKLKTLNVSGNFLVSFPKSIQHCRSLEELNANFNKLIRLPDSIGFEL 173

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--D 219
            +L  L +  N++ +LP++++ L  L  LD   N L  LPD + +LI+L+ L V  N   
Sbjct: 174 TNLRKLSINSNKLISLPLSITHLTSLRVLDARLNCLMILPDDLENLINLEILNVSQNFQY 233

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           L  LP +IG   +L EL V YN++  LPE++G +  L  LSV  N
Sbjct: 234 LSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLRKLSVEGN 278



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 2/74 (2%)

Query: 108 LPDSIGKLSSLVSLDLSEN--RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LPD +  L +L  L++S+N   + A+P++IG L +L +LD+  N+I  LP+SIG +  L 
Sbjct: 212 LPDDLENLINLEILNVSQNFQYLSALPSSIGLLMNLIELDVSYNKITVLPESIGCMRRLR 271

Query: 166 YLDLRGNQISALPV 179
            L + GN + + P+
Sbjct: 272 KLSVEGNPLVSPPI 285


>gi|195123347|ref|XP_002006169.1| GI18706 [Drosophila mojavensis]
 gi|193911237|gb|EDW10104.1| GI18706 [Drosophila mojavensis]
          Length = 906

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 74  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLI 133

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L++  NNL +LP S+  L++L++L +  N+  E
Sbjct: 134 SLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTE 193

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP  +S+  ++  L
Sbjct: 194 LPEVVGELKSLRELWIDFNQIRRVAPNIGKLRDLQHFEANGNLLDTLPNELSNWRNVEVL 253

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 254 SVCSNNLEAFPFSVGMLKSLVTFKCESN--GLSELPDSISYLEQLEELVLSHNKLMRLPS 311

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +   L++LR L   +N L   P
Sbjct: 312 TIGSLTKLRFLFADDNQLRHLP 333



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/239 (34%), Positives = 130/239 (54%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 165 LNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVAPNIGKL 224

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SNNL + P S+G L SL     E+N L 
Sbjct: 225 RDLQHFEANGNLLDTLPNELSNWRNVEVLSVCSNNLEAFPFSVGMLKSLVTFKCESNGLS 284

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G +  L  L    N ++ LP  + S S L  
Sbjct: 285 ELPDSISYLEQLEELVLSHNKLMRLPSTIGSLTKLRFLFADDNQLRHLPDELCSCSQLSV 344

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++     L  +N+ NN+  + ALP S+ +L  L  L +S+NQ + L
Sbjct: 345 LSVANNQLSALPQNIGHLAKLKVLNVVNNY--INALPVSMLSLVNLTSLWLSDNQSQPL 401



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+  +P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 33  FPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIPQAIGSLRQLQHL 92

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 93  DLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 152

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR L V  N L  LP+++ ++  L+ L +  N   +LP  +  L SLREL + FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLRELWIDFN 212

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  V  ++     L       N  D   LP  + N   +E L + +N +   P S  ML
Sbjct: 213 QIRRVAPNIGKLRDLQHFEANGNLLD--TLPNELSNWRNVEVLSVCSNNLEAFPFSVGML 270

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L   + + N L   P +I
Sbjct: 271 KSLVTFKCESNGLSELPDSI 290



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 237 RVDYNRL---KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           ++DY+      A PE      TLE L +    ++ LP  +     LR L V+ N LES+P
Sbjct: 21  KLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRVLQVNSNNLESIP 80

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +++     L  +++  N   +  +P  I   + L  LD+S N ++ LPD+   L  L+ L
Sbjct: 81  QAIGSLRQLQHLDLNRNL--IVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQEL 138

Query: 354 RVQENPLEVPPRNI 367
            + E  LE  P N 
Sbjct: 139 LLNETYLEFLPANF 152


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 3/241 (1%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
            +P  IG L +L +L L +N++  LP  IG L  +  L L  NQ++ LP  + +L +L E
Sbjct: 54  TLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRE 113

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL +N L++LP  IG L +L++L +  N L+ LP  IGQ  +LREL +D N+LK LP+ 
Sbjct: 114 LDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKD 173

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +GK+  L  L++  N +  LP  + +L +L EL +  NEL ++P+ +     L  + +G 
Sbjct: 174 IGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLG- 232

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
             A L  LP  IG L+ L EL++S NQI  LP     L  L+VL + EN L   P+ I +
Sbjct: 233 --ALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQ 290

Query: 370 M 370
           +
Sbjct: 291 L 291



 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/287 (34%), Positives = 158/287 (55%), Gaps = 4/287 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IGKL  L  LDL+ N +  +P  IG L +L++L L+ N++  LP  IG L 
Sbjct: 96  NQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQ 155

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GNQ+  LP  + +L  L EL+L +N L++LP  IG+L +L +L++  N+L  
Sbjct: 156 NLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTT 215

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L+ L +    L  LP  +G + +L  L++  N I  LP  +  L +L+ L
Sbjct: 216 LPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVL 274

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+L ++P+ +     L ++++  N   +  LP+ IG L+ L EL++S NQI  LP 
Sbjct: 275 YLSENQLATLPKEIGQLQNLRELDLSGN--QITTLPKEIGELQSLRELNLSGNQITTLPK 332

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAK 389
               L  LR L +  N +   P+ I  +    V+ Y+ D+   R  K
Sbjct: 333 EIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVL-YLDDIPAWRSQK 378



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 151/291 (51%), Gaps = 24/291 (8%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + N E LP  IG+L +L  L LS N++  +P  IG L  +++L L  N++  LP  IG L
Sbjct: 49  LHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKL 108

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDL  N ++ LP  + +L  L EL L +N L +LP  IG L +L++L ++ N L+
Sbjct: 109 KKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLK 168

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP----------- 270
            LP  IG+  +L EL +  N L  LP+ +G +  L  L +  N +  LP           
Sbjct: 169 TLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQV 228

Query: 271 -------TTMSS----LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
                  TT+ +    L SLREL++S N++ ++P+ +     L  + +  N   L  LP+
Sbjct: 229 LYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSEN--QLATLPK 286

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG L+ L ELD+S NQI  LP     L  LR L +  N +   P+ I ++
Sbjct: 287 EIGQLQNLRELDLSGNQITTLPKEIGELQSLRELNLSGNQITTLPKEIGKL 337



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 143/244 (58%), Gaps = 6/244 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R+L L N   + ++ LP  IG+L +L  L L  N++  +P  IG L +L +L
Sbjct: 127 EIGQLQNLRELYLYN---NQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTEL 183

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N +  LP  IG+L +L  L L  N+++ LP  + +L  L+ L LG+  L++LP+ I
Sbjct: 184 NLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYLGAL-LTTLPNDI 242

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L SL++L +  N +  LP  IGQ  +L+ L +  N+L  LP+ +G++  L  L +  N
Sbjct: 243 GYLKSLRELNLSGNQITTLPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRELDLSGN 302

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  +  L SLREL++S N++ ++P+ +    +L ++N+G N   +  +P+ IG+L
Sbjct: 303 QITTLPKEIGELQSLRELNLSGNQITTLPKEIGKLQSLRELNLGGN--QITTIPKEIGHL 360

Query: 325 EMLE 328
           + L+
Sbjct: 361 KNLQ 364



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 87/154 (56%), Gaps = 2/154 (1%)

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I+  ++ E LP  IG+  +L EL +  N+LK LP+ +GK+  +E LS+  N +  LP  +
Sbjct: 46  ILSLHNNETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDI 105

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  LRELD++ N L ++P+ +     L ++ + NN   L+ LP+ IG L+ L EL + 
Sbjct: 106 GKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNN--QLKTLPKDIGQLQNLRELYLD 163

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            NQ++ LP     L  L  L +  NPL   P++I
Sbjct: 164 GNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDI 197


>gi|124003974|ref|ZP_01688821.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990553|gb|EAY30033.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 389

 Score =  148 bits (373), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 153/271 (56%), Gaps = 4/271 (1%)

Query: 102 MDNIEW--LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           M+   W  LP  I +L+ L  L L  N++ A+P TI  L  L  L+L  NR+  LP+SIG
Sbjct: 79  MEQNTWSTLPKEILQLTQLQELKLRNNQLQALPHTIHQLGCLTSLNLSKNRLRNLPESIG 138

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L +L L GN++SALP + ++L  L+ L L +N L++ P  +  LI L+KL +  ND
Sbjct: 139 HLQHLQHLWLWGNRLSALPQSFAQLTALKVLYLDNNLLTTFPQEVTQLIHLEKLFLGGND 198

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +++L   IG+   L  L +    +K LP+ +GK+  L+ L+   + +K LP T   L+ L
Sbjct: 199 IQDLSPAIGKLVQLNTLSLADTLIKKLPDEIGKLKQLQQLNFENSKLKVLPKTFGQLAQL 258

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            E+ +++N+L ++PE++   + L ++++  N   L   P+SIG L  LE L   +NQ+ V
Sbjct: 259 SEVFLAYNQLGALPETIGGLSKLKELHLQVN--RLTGFPKSIGKLNSLEVLVADDNQLEV 316

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LP     +  LR L +  N L+  P  + ++
Sbjct: 317 LPAEINGMKNLRSLSLSGNQLKTLPIKLTQL 347



 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 147/269 (54%), Gaps = 5/269 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L L+N   + ++ LP +I +L  L SL+LS+NR+  +P +IG L  L+ L L  NR+ 
Sbjct: 98  QELKLRN---NQLQALPHTIHQLGCLTSLNLSKNRLRNLPESIGHLQHLQHLWLWGNRLS 154

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP S   L +L  L L  N ++  P  +++L+ LE+L LG N++  L  +IG L+ L  
Sbjct: 155 ALPQSFAQLTALKVLYLDNNLLTTFPQEVTQLIHLEKLFLGGNDIQDLSPAIGKLVQLNT 214

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +    +++LP  IG+   L++L  + ++LK LP+  G++  L  + + YN +  LP T
Sbjct: 215 LSLADTLIKKLPDEIGKLKQLQQLNFENSKLKVLPKTFGQLAQLSEVFLAYNQLGALPET 274

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  LS L+EL +  N L   P+S+    +L  +   +N   L  LP  I  ++ L  L +
Sbjct: 275 IGGLSKLKELHLQVNRLTGFPKSIGKLNSLEVLVADDN--QLEVLPAEINGMKNLRSLSL 332

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           S NQ++ LP     L  L  L V  NP E
Sbjct: 333 SGNQLKTLPIKLTQLEHLHKLNVYNNPFE 361



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 126/236 (53%), Gaps = 2/236 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L +L +  N    LP  I  L  L  L LR NQ+ ALP  + +L  L  L+L  N L +L
Sbjct: 74  LTQLKMEQNTWSTLPKEILQLTQLQELKLRNNQLQALPHTIHQLGCLTSLNLSKNRLRNL 133

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P+SIG L  L+ L +  N L  LP +  Q ++L+ L +D N L   P+ V ++  LE L 
Sbjct: 134 PESIGHLQHLQHLWLWGNRLSALPQSFAQLTALKVLYLDNNLLTTFPQEVTQLIHLEKLF 193

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N+I+ L   +  L  L  L ++   ++ +P+ +     L ++N  N  + L+ LP++
Sbjct: 194 LGGNDIQDLSPAIGKLVQLNTLSLADTLIKKLPDEIGKLKQLQQLNFEN--SKLKVLPKT 251

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
            G L  L E+ ++ NQ+  LP++   LS+L+ L +Q N L   P++I ++ +  V+
Sbjct: 252 FGQLAQLSEVFLAYNQLGALPETIGGLSKLKELHLQVNRLTGFPKSIGKLNSLEVL 307


>gi|195381915|ref|XP_002049678.1| GJ21726 [Drosophila virilis]
 gi|194144475|gb|EDW60871.1| GJ21726 [Drosophila virilis]
          Length = 861

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 74  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLI 133

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L++  NNL +LP S+  L+SL++L +  N+  E
Sbjct: 134 SLQELLLNETYLEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTE 193

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SLREL +D+N+++ +   +GK+  L+      N +  LP  +S+  ++  L
Sbjct: 194 LPEVVGELKSLRELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDTLPNELSNWRNVEVL 253

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 254 SICSNNLEAFPFSVGMLKSLVTFKCESN--GLSELPDSISYLEQLEELVLSHNKLMRLPS 311

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +   L +LR L   +N L   P
Sbjct: 312 TIGSLVKLRFLFADDNQLRQLP 333



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 146/254 (57%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L +L  L++  N ++ +P ++  L SL++LD+  N   ELP+ +G+L SL
Sbjct: 145 LEFLPANFGRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGELKSL 204

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  NQI  +   + +L  L+  +   N L +LP+ + +  +++ L + +N+LE  P
Sbjct: 205 RELWIDFNQIRRVAPNIGKLRELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFP 264

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            ++G   SL   + + N L  LP+++  +  LE L + +N + +LP+T+ SL  LR L  
Sbjct: 265 FSVGMLKSLVTFKCESNGLSELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFA 324

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L  +P+ LC  + L  +++ NN   L ALP++IG+L  L+ L++ NN I  LP S 
Sbjct: 325 DDNQLRQLPDELCSCSQLSVLSVANN--QLSALPQNIGHLAKLKVLNVVNNYINALPVSM 382

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 383 LSLVNLTSLWLSDN 396



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L SL  LD+  N    +P  +G L SL++L +  N+I  +  +IG L
Sbjct: 165 LNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGELKSLRELWIDFNQIRRVAPNIGKL 224

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SNNL + P S+G L SL     E+N L 
Sbjct: 225 RELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLS 284

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G +  L  L    N ++QLP  + S S L  
Sbjct: 285 ELPDSISYLEQLEELVLSHNKLMRLPSTIGSLVKLRFLFADDNQLRQLPDELCSCSQLSV 344

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++     L  +N+ NN+  + ALP S+ +L  L  L +S+NQ + L
Sbjct: 345 LSVANNQLSALPQNIGHLAKLKVLNVVNNY--INALPVSMLSLVNLTSLWLSDNQSQPL 401



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 128/260 (49%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+  +P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 33  FPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRILQVNSNNLESIPQAIGSLRQLQHL 92

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 93  DLNRNLIVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 152

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR L V  N L  LP+++ ++ +L+ L +  N   +LP  +  L SLREL + FN
Sbjct: 153 GRLVNLRILEVRLNNLITLPKSMVRLVSLQRLDIGGNEFTELPEVVGELKSLRELWIDFN 212

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  V  ++     L       N  D   LP  + N   +E L I +N +   P S  ML
Sbjct: 213 QIRRVAPNIGKLRELQHFEANGNLLD--TLPNELSNWRNVEVLSICSNNLEAFPFSVGML 270

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L   + + N L   P +I
Sbjct: 271 KSLVTFKCESNGLSELPDSI 290



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 5/134 (3%)

Query: 237 RVDYNRL---KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           ++DY+      A PE      TLE L +    ++ LP  +     LR L V+ N LES+P
Sbjct: 21  KLDYSNTPLQDAFPEVWQHERTLEELHLSNARLQTLPPQLFYCQGLRILQVNSNNLESIP 80

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +++     L  +++  N   +  +P  I   + L  LD+S N ++ LPD+   L  L+ L
Sbjct: 81  QAIGSLRQLQHLDLNRNL--IVNVPEEIKACKHLTHLDLSCNSLQRLPDAITSLISLQEL 138

Query: 354 RVQENPLEVPPRNI 367
            + E  LE  P N 
Sbjct: 139 LLNETYLEFLPANF 152


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 102/286 (35%), Positives = 164/286 (57%), Gaps = 7/286 (2%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+ ++ N  ++ L D IG+L +L +L L +N +  +PA IG L +L+ LDL  N+   
Sbjct: 91  NLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNELETLPAAIGELENLRDLDLGDNQFES 150

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
            P  I  L +L  L L  N++ + P  ++ L +L+ L+L  N L  LPD IG L +L+ L
Sbjct: 151 FPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYL 210

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N LE LP  IG+  +L+ L +  N+L+ LP A+G++  L+ L +  NN+K LP  +
Sbjct: 211 NLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEI 270

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  LR L +S N+LE++P  +     L  + +  N   L  LP +IG LE L++L ++
Sbjct: 271 EKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGN--KLETLPVAIGELENLQKLYLN 328

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +N++  LP +   L  LR L ++ N L++ P  I E+G    +QY+
Sbjct: 329 DNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGD---LQYL 371



 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 151/268 (56%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP +IG+L +L  LDL +N+  + P  I  L +L++L L  N++   P  I +L 
Sbjct: 123 NELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELR 182

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L GN++  LP  +  L  L+ L+L  N L SLP  IG L +L+ L +  N LE 
Sbjct: 183 KLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEI 242

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L++L +  N LK LP  + K+  L +L +  N ++ LP  +  L  LR L
Sbjct: 243 LPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRIL 302

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N+LE++P ++     L K+ + +N   L  LP +IG L+ L EL + NN++++LP 
Sbjct: 303 QLSGNKLETLPVAIGELENLQKLYLNDN--KLETLPAAIGELDNLRELCLRNNKLKILPS 360

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L ++ N LE  P  I E+
Sbjct: 361 EIGELGDLQYLDLKNNKLETLPAAIGEL 388



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 154/272 (56%), Gaps = 5/272 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           RDL+L +   +  E  P  I KL +L  L L  N++ + P  I  L  L+ L+L  N++ 
Sbjct: 139 RDLDLGD---NQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLK 195

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LPD IG+L +L YL+L  N++ +LP  +  L  L+ L LG N L  LP +IG L +L+K
Sbjct: 196 LLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQK 255

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N+L+ LP  I +   LR L++  N+L+ LP  + K+  L +L +  N ++ LP  
Sbjct: 256 LYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVA 315

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L ++ N+LE++P ++     L ++ + NN   L+ LP  IG L  L+ LD+
Sbjct: 316 IGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNN--KLKILPSEIGELGDLQYLDL 373

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            NN++  LP +   L  LR L +  N LE  P
Sbjct: 374 KNNKLETLPAAIGELKNLRELNLSGNKLETLP 405



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 143/245 (58%), Gaps = 7/245 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL    ++ +E LP  IG+L +L  L L +N++  +P  IG L +L+KL
Sbjct: 200 EIGELKNLQYLNLS---LNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKL 256

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            LH N +  LP  I  L  L  L L GN++  LPV + +L  L  L L  N L +LP +I
Sbjct: 257 YLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAI 316

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+KL +  N LE LP  IG+  +LREL +  N+LK LP  +G++  L+ L ++ N
Sbjct: 317 GELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGELGDLQYLDLKNN 376

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVP---ESLCFATTLVKMNIGNNFADLRALPRSI 321
            ++ LP  +  L +LREL++S N+LE++P   E L  +  L+ +  GNN +++    R++
Sbjct: 377 KLETLPAAIGELKNLRELNLSGNKLETLPIEIEKLSGSMQLLNLR-GNNISEVGDGERTV 435

Query: 322 GNLEM 326
           G  E+
Sbjct: 436 GRREL 440



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           +I +L  L  L+LS N + A+P+ IG L +L+ L L  N++  L D IG+L +L  L L 
Sbjct: 62  NIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLD 121

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            N++  LP A+  L  L +LDLG N   S P  I  L +L++LI++ N LE  P  I + 
Sbjct: 122 DNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAEL 181

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
             L+ L +  N+LK LP+ +G++  L+ L++  N ++ LP  +  L +L+ L +  N+LE
Sbjct: 182 RKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLE 241

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P ++     L K+ +  N  +L+ LP  I  L+ L  L +S N++  LP     L  L
Sbjct: 242 ILPIAIGELENLQKLYLHRN--NLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKEL 299

Query: 351 RVLRVQENPLEVPPRNIVEM 370
           R+L++  N LE  P  I E+
Sbjct: 300 RILQLSGNKLETLPVAIGEL 319



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 131/245 (53%), Gaps = 2/245 (0%)

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           I  +  +I  L+ L  L+L  N + ALP  +  L  L+ L L +N L +L D IG L +L
Sbjct: 56  ITSIDSNIKRLVKLEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENL 115

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             L ++ N+LE LP  IG+  +LR+L +  N+ ++ P  + K+  LE L +  N ++  P
Sbjct: 116 STLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFP 175

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           T ++ L  L+ L++  N+L+ +P+ +     L  +N+  N   L +LP  IG L+ L+ L
Sbjct: 176 TVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLN--KLESLPPEIGELKNLQHL 233

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            + +N++ +LP +   L  L+ L +  N L+  P  I ++    ++Q   + +E    + 
Sbjct: 234 FLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEI 293

Query: 391 QPVKQ 395
           + +K+
Sbjct: 294 EKLKE 298


>gi|71895087|ref|NP_001026407.1| leucine-rich repeat protein SHOC-2 [Gallus gallus]
 gi|82231244|sp|Q5F4C4.1|SHOC2_CHICK RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|60098359|emb|CAH65010.1| hypothetical protein RCJMB04_1b13 [Gallus gallus]
          Length = 529

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   L+EL+L +NN+S+LP+ +  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 148/314 (47%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +LV+L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLT 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLATLYLRFNRITTVEKDIKTLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LPE +G + +L  L +RYN +  +P +++  S L EL
Sbjct: 253 LPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  L VL
Sbjct: 373 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVL 430

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 431 ILSNNLLKKLPHGI 444



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 121/271 (44%), Gaps = 51/271 (18%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPEEIGSCTQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCS 307

Query: 163 SLVYLDLRGNQISALPVAL----------------------------------------- 181
            L  L+L  N IS LP  L                                         
Sbjct: 308 ELDELNLENNNISTLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRI 367

Query: 182 --------SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
                   SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             +   T L  + +G N   L  LP  IG +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGKI 516



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/210 (34%), Positives = 120/210 (57%), Gaps = 14/210 (6%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++ 
Sbjct: 311 ELNLEN---NNISTLPE--GLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNME 363

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 423

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL+ LI+  N L++LPH IG    LREL ++ N+L++LP  +  +  L+ L +  N +
Sbjct: 424 LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQL 483

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESL 296
             LP  +  L++L  L +  N L  +PE +
Sbjct: 484 TTLPRGIGHLTNLTHLGLGENLLTHLPEEI 513



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 91/159 (57%), Gaps = 2/159 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  +  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           +  N L  LP  IG  ++L  L +  N L  LPE +GKI
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGKI 516



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+ +  L+ L EL +  N+L+S+P  +     LV + +  N   L +LP S+ NL+
Sbjct: 112 IHMLPSAVKELTQLTELYLYSNKLQSLPAEVGCLVNLVTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L+ L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLTSLATLYLRFNRITTVEKDI 211


>gi|327282314|ref|XP_003225888.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Anolis
           carolinensis]
          Length = 605

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/283 (33%), Positives = 167/283 (59%), Gaps = 4/283 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P  IG L +L+KL++  N++ +LP+ +  L 
Sbjct: 93  NKLKCLSDDLKLLPALTVLDIHDNQLTSLPLAIGSLENLQKLNVSHNKLTDLPEELLQLK 152

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L+ N++S LP    +L+ LEELD+ +N++S++P S   L +L +L +  N L+ 
Sbjct: 153 HLRSLLLQHNELSHLPDEFGKLISLEELDISNNHVSAIPTSFAFLTNLVQLNLSHNQLKF 212

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    SLR+L    N L+ +P  +  + +LE L +R N ++ LP  + S + L+EL
Sbjct: 213 LPAEISAMKSLRQLDCTKNYLETIPPELANMASLEQLYLRRNKLRYLP-DLPSCTVLKEL 271

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +L  +++  N   L+++P  I  LE +E LD+SNN I  LP
Sbjct: 272 HVGENQIEMLKAEHLKHLNSLCVLDLREN--KLKSVPDEIALLEGIERLDLSNNDISSLP 329

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
                LS+L+ L ++ NPL    R+I++ G Q +++Y+ + ++
Sbjct: 330 CKLGNLSQLKFLALEGNPLRTIRRDILQKGTQEILKYLRNKIQ 372



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 141/318 (44%), Gaps = 50/318 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+SL  LDL EN++ +VP  I  L  +++LDL  N I  LP  +G+L  L +L L
Sbjct: 284 EHLKHLNSLCVLDLRENKLKSVPDEIALLEGIERLDLSNNDISSLPCKLGNLSQLKFLAL 343

Query: 170 RGNQI-------------------------------------------SALPVALSRLVR 186
            GN +                                           S L V L  L  
Sbjct: 344 EGNPLRTIRRDILQKGTQEILKYLRNKIQDDNEIRPNGVLPVTAMTLPSQLDVNLHALTA 403

Query: 187 LEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCS-SLRELRVDYNR 242
           L+ LD      + +PD + + +    +  +    N L E+P  I +   ++ ++   +N+
Sbjct: 404 LKTLDYSEKQATVIPDEVLNAVGNNPVTTVNFSKNHLTEIPARIVELKETVCDINFSFNK 463

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L ++   +  ++ L  L VR N +  LP  M +L  L+ ++++FN  +  P+ L    TL
Sbjct: 464 LFSVSLELCMLYRLTHLDVRNNCLTSLPDEMEALGKLQIINLAFNRFKVFPDILYRIPTL 523

Query: 303 VKMNIGNNFADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
             + +GNN   + +L P  I  L+ L  LD+ NN I  +P      + LR L ++ NP  
Sbjct: 524 EAILLGNN--QVGSLDPLQIKKLDQLSTLDLQNNDILHVPPELGNCTSLRTLLLEGNPFR 581

Query: 362 VPPRNIVEMGAQAVVQYM 379
            P   I+  G  AV++Y+
Sbjct: 582 TPRVTILAKGTDAVLEYL 599


>gi|326668654|ref|XP_001920812.3| PREDICTED: leucine-rich repeat-containing protein 7-like [Danio
           rerio]
          Length = 1473

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 96/257 (37%), Positives = 144/257 (56%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP+   +L +L  L L++  +  +PA  G LS L+ L+L  N +  +P SI  L  L
Sbjct: 127 IAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L+EL L +N+L ++P SIG L  L+ L +  N +E L 
Sbjct: 187 ERLDLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL +L +  N L+ LP+++GK+  L  L V  N +  LP T+ SLS L E D 
Sbjct: 247 ADISGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L       NF  L  LPR IGN   +  + + +N++  LPD  
Sbjct: 307 SCNELESLPPTIGYLHSLRTFAADENF--LSDLPREIGNCRNVTVMSLRSNKLEFLPDEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             +++LRVL + +N L+
Sbjct: 365 GQMTKLRVLNLSDNRLK 381



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 30/334 (8%)

Query: 61  MIMCMCCVGQDGEKLSLIKLA--SLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLS 116
           ++ C C  G++ E +S++  +  SL +V  +  + +  L+   +D   IE LP  +    
Sbjct: 11  LVPCRCFRGEE-EVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQ 69

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG----------------- 159
           +L  L + +N +  +P TI  L +LK+LD+  N I E PD+I                  
Sbjct: 70  ALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAK 129

Query: 160 ------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
                  LL+L  L L    +  LP    RL +L  L+L  N+L ++P SI  L  L++L
Sbjct: 130 LPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERL 189

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + +N+  ELP  + Q  SL+EL +D N L+ +P ++GK+  L  L +  N I+ L   +
Sbjct: 190 DLGSNEFSELPEVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADI 249

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           S   SL +L +S N L+ +P+S+     L  + + +N   L +LP +IG+L +LEE D S
Sbjct: 250 SGCESLEDLLLSANMLQQLPDSIGKLKKLTTLKVDDN--QLTSLPNTIGSLSLLEEFDCS 307

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N++  LP +   L  LR     EN L   PR I
Sbjct: 308 CNELESLPPTIGYLHSLRTFAADENFLSDLPREI 341



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/186 (40%), Positives = 112/186 (60%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ +P SIGKL  L  LDL++NRI ++ A I G  SL+ L L AN + +LPDSIG L 
Sbjct: 217 NSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLPDSIGKLK 276

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ+++LP  +  L  LEE D   N L SLP +IG L SL+    + N L +
Sbjct: 277 KLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLSD 336

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C ++  + +  N+L+ LP+ +G++  L VL++  N +K LP T + L  L  L
Sbjct: 337 LPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAAL 396

Query: 283 DVSFNE 288
            +S N+
Sbjct: 397 WLSDNQ 402



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/252 (32%), Positives = 124/252 (49%), Gaps = 46/252 (18%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD-------- 156
           +E+LP + G+LS L  L+L EN +  +P +I  LS L++LDL +N   ELP+        
Sbjct: 150 LEYLPANFGRLSKLRILELRENHLKTMPKSIHRLSQLERLDLGSNEFSELPEVLEQIHSL 209

Query: 157 ---------------SIGDLLSLVYLDLRGNQISAL-----------------------P 178
                          SIG L  L YLDL  N+I +L                       P
Sbjct: 210 KELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDADISGCESLEDLLLSANMLQQLP 269

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            ++ +L +L  L +  N L+SLP++IGSL  L++     N+LE LP TIG   SLR    
Sbjct: 270 DSIGKLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAA 329

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D N L  LP  +G    + V+S+R N ++ LP  +  ++ LR L++S N L+++P +   
Sbjct: 330 DENFLSDLPREIGNCRNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTK 389

Query: 299 ATTLVKMNIGNN 310
              L  + + +N
Sbjct: 390 LKDLAALWLSDN 401



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 27/227 (11%)

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           L  +YLD   NQI  LP  L     L++L +  N+LS+LP +I SL++LK+L +  N ++
Sbjct: 48  LEELYLD--ANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQ 105

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E P  I  C  L  +    N +  LPE   ++  L  L +    ++ LP     LS LR 
Sbjct: 106 EFPDNIKCCKCLSVVEASVNPIAKLPEGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRI 165

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L++  N L                         + +P+SI  L  LE LD+ +N+   LP
Sbjct: 166 LELRENHL-------------------------KTMPKSIHRLSQLERLDLGSNEFSELP 200

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           +    +  L+ L +  N L+  P +I ++     +    + +E  DA
Sbjct: 201 EVLEQIHSLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIESLDA 247



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + S   +L EL +  N++E +P+ L     L K+++ +
Sbjct: 19  GEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPD 78

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL  LP +I +L  L+ELDIS N I+  PD+ +    L V+    NP+   P    +
Sbjct: 79  N--DLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKCLSVVEASVNPIAKLPEGFTQ 136

Query: 370 M 370
           +
Sbjct: 137 L 137


>gi|194753275|ref|XP_001958942.1| GF12306 [Drosophila ananassae]
 gi|190620240|gb|EDV35764.1| GF12306 [Drosophila ananassae]
          Length = 860

 Score =  148 bits (373), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 74  NNLESIPQAIGSLRQLQHLDLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDAITSLI 133

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  L++L++L +  N+  E
Sbjct: 134 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTE 193

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  SL+EL +D+N+++ +   +GK+  L+      N +  LP  +S+  ++  L
Sbjct: 194 LPEVVGELKSLKELWIDFNQIRRVSANIGKLRELQHFEANGNLLDTLPNELSNWRNVEVL 253

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N LE+ P S+    +LV     +N   L  LP SI  LE LEEL +S+N++  LP 
Sbjct: 254 SICSNNLEAFPFSVGMLKSLVTFKCESN--GLTELPDSISYLEQLEELVLSHNKLIRLPS 311

Query: 343 SFRMLSRLRVLRVQENPLEVPP 364
           +  ML  LR L   +N L   P
Sbjct: 312 TIGMLRSLRFLFADDNQLRQLP 333



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 131/239 (54%), Gaps = 2/239 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N+  LP S+ +L +L  LD+  N    +P  +G L SLK+L +  N+I  +  +IG L
Sbjct: 165 LNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLKELWIDFNQIRRVSANIGKL 224

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L + +  GN +  LP  LS    +E L + SNNL + P S+G L SL     E+N L 
Sbjct: 225 RELQHFEANGNLLDTLPNELSNWRNVEVLSICSNNLEAFPFSVGMLKSLVTFKCESNGLT 284

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I     L EL + +N+L  LP  +G + +L  L    N ++QLP  + S   L  
Sbjct: 285 ELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLPDELCSCQQLSV 344

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L V+ N+L ++P+++     L  +N+ NN+  + ALP S+ NL  L  L +S+NQ + L
Sbjct: 345 LSVASNQLSALPQNIGNLAKLRVLNVVNNY--INALPVSMLNLVNLTSLWLSDNQSQPL 401



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 127/260 (48%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+      +L  L LS  R+  +P  +     L+ L +++N +  +P +IG L  L +L
Sbjct: 33  FPEVWQHERTLEELYLSTTRLQTLPPQLFYCQGLRVLHVNSNNLESIPQAIGSLRQLQHL 92

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N I  +P  +     L  LDL  N+L  LPD+I SLISL++L++    LE LP   
Sbjct: 93  DLNRNLIVTVPDEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELLLNETYLEFLPANF 152

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +LR L +  N L  LP+++ ++  L+ L +  N   +LP  +  L SL+EL + FN
Sbjct: 153 GRLVNLRILELRLNNLITLPKSMVRLVNLQRLDIGGNEFTELPEVVGELKSLKELWIDFN 212

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  V  ++     L       N  D   LP  + N   +E L I +N +   P S  ML
Sbjct: 213 QIRRVSANIGKLRELQHFEANGNLLD--TLPNELSNWRNVEVLSICSNNLEAFPFSVGML 270

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L   + + N L   P +I
Sbjct: 271 KSLVTFKCESNGLTELPDSI 290


>gi|290957973|ref|YP_003489155.1| hypothetical protein SCAB_35131 [Streptomyces scabiei 87.22]
 gi|260647499|emb|CBG70604.1| putative leucine-rich repeat protein [Streptomyces scabiei 87.22]
          Length = 307

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/304 (33%), Positives = 157/304 (51%), Gaps = 27/304 (8%)

Query: 53  IFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEV-SSKKGTRDLNLQNKLMDNIEWLPDS 111
           +  N   +      C     E L L  L  L EV ++ +  R L   +   +N++ LP+ 
Sbjct: 3   VVDNDTTVGARIHACRTTGAESLDLSGL-ELTEVPAAVRELRHLTGLDLNQNNLDALPEW 61

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           IG L +L SL + EN + ++P +IG L+ L +L+L+ N +  +P  +GDL  L  L L G
Sbjct: 62  IGDLGALKSLSVQENSLTSLPESIGRLTRLTELNLYHNELASVPPYVGDLTGLTRLMLDG 121

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N+++ LP  L +L RL  L LG N L  LP+ IG L++L++L+   N L  +P +IG+ +
Sbjct: 122 NELTELPPTLRKLTRLTFLSLGENQLGELPEWIGELVALERLLAMRNGLTGIPESIGRLT 181

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            L EL +D+N L A+P  +G +  +  L +  N + +LP T+  L+ L  L +  N L S
Sbjct: 182 RLVELNLDFNELTAIPACLGDLTRMTQLMLYGNKLTELPPTLRKLTRLTFLALGENRLAS 241

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VPE L                         G L  LE L +++N +  LPDSF  L+RL 
Sbjct: 242 VPEWL-------------------------GELTELETLWLTDNVLTTLPDSFGALTRLE 276

Query: 352 VLRV 355
           +L +
Sbjct: 277 ILEM 280



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 140/252 (55%), Gaps = 27/252 (10%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           SLDLS   +  VPA +  L  L  LDL+ N +  LP+ IGDL +L  L ++ N +++LP 
Sbjct: 24  SLDLSGLELTEVPAAVRELRHLTGLDLNQNNLDALPEWIGDLGALKSLSVQENSLTSLPE 83

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ++ RL RL EL+L  N L+S+P  +G L  L +L+++ N+L ELP T+ + + L  L + 
Sbjct: 84  SIGRLTRLTELNLYHNELASVPPYVGDLTGLTRLMLDGNELTELPPTLRKLTRLTFLSLG 143

Query: 240 YNRLKALPEAVGKIHTLE-VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            N+L  LPE +G++  LE +L++R                        N L  +PES+  
Sbjct: 144 ENQLGELPEWIGELVALERLLAMR------------------------NGLTGIPESIGR 179

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            T LV++N+  +F +L A+P  +G+L  + +L +  N++  LP + R L+RL  L + EN
Sbjct: 180 LTRLVELNL--DFNELTAIPACLGDLTRMTQLMLYGNKLTELPPTLRKLTRLTFLALGEN 237

Query: 359 PLEVPPRNIVEM 370
            L   P  + E+
Sbjct: 238 RLASVPEWLGEL 249


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 157/293 (53%), Gaps = 27/293 (9%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+ LD+  N L ++P+ +     L K+++
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHL 314

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
             N   L  LP+ IG L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 315 SRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 365



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/291 (32%), Positives = 150/291 (51%), Gaps = 27/291 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 64  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 123

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 124 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 183

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 184 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 243

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L  +++  N   L  LP+
Sbjct: 244 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQN--RLTTLPK 301

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I ++
Sbjct: 302 EIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQL 352



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/252 (35%), Positives = 145/252 (57%), Gaps = 4/252 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+VL + +N
Sbjct: 237 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQN 294

Query: 359 PLEVPPRNIVEM 370
            L   P+ I ++
Sbjct: 295 RLTTLPKEIGQL 306



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 131/245 (53%), Gaps = 8/245 (3%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  +++  LP  IG L +L  L+   NQ++ LP  + +L  L+EL L +N L++LP+ 
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +LK L +  N L  LP  IG+  +L+EL +  NRL  LP+ +G++  L+ L +  
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNE--LESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           N +  LP  +  L SLR+L +         +P+ +     L ++++   F  L  LP+ I
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLK--FNRLTVLPKEI 234

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L+ L  LD+  N++ +LP     L  L VL +  N L + P+ I ++    V+    D
Sbjct: 235 GQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVL----D 290

Query: 382 LVEKR 386
           L + R
Sbjct: 291 LYQNR 295



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 5/228 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL    ++ +  LP  IG+L +L  L LS NR+  +P  IG L SL+KL
Sbjct: 139 EIGKLQNLQELNL---FVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKL 195

Query: 145 DLHANR--IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L         LP  I  L +L  L L+ N+++ LP  + +L  L  LDL  N L+ LP 
Sbjct: 196 SLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPK 255

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L  L +  N L  LP  I Q  +L+ L +  NRL  LP+ +G++  L+ L + 
Sbjct: 256 EIGQLKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLS 315

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            N +  LP  +  L  L  L +  N+L ++PE +     L K+ + NN
Sbjct: 316 RNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 363


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 153/267 (57%), Gaps = 2/267 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+E LP++   L +L  L +  ++I A+P  IG L SL  L +  N+I  LP S G+L S
Sbjct: 725 NLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELES 784

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+ L    N+I  LP +  +L  L  L L SN ++SLPD+ G L +L + ++  N L  L
Sbjct: 785 LMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRL 844

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P + G   SLR L +  NRL++LP+    + +LE L + +N +K++P  +  L +L +  
Sbjct: 845 PESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKNLTKFS 904

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           ++ N L+ +P+S+     L ++N+ NN   ++ LP  +GNL  L EL++++N++  LPDS
Sbjct: 905 LAQNSLKIIPDSVTKLYELEELNMANN--AIKRLPYCMGNLRKLMELNLNSNKLDNLPDS 962

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEM 370
            + L RL +L++  N        + EM
Sbjct: 963 MKNLERLSILKIHTNQFRRLSDCVYEM 989



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 155/278 (55%), Gaps = 4/278 (1%)

Query: 95   LNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
            +NL+  ++ N  I  LP++IG L SL  L +  N+I  +P + G L SL +L    N+I 
Sbjct: 737  INLKQLVIQNSKITALPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIP 796

Query: 153  ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
             LPDS G L +L  L L  NQI++LP    +L  L E  +  N L+ LP+S G+L SL+ 
Sbjct: 797  LLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRV 856

Query: 213  LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
            L ++ N LE LP      +SL  L +D+NRLK +PE +G +  L   S+  N++K +P +
Sbjct: 857  LWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDS 916

Query: 273  MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
            ++ L  L EL+++ N ++ +P  +     L+++N+ +N  D   LP S+ NLE L  L I
Sbjct: 917  VTKLYELEELNMANNAIKRLPYCMGNLRKLMELNLNSNKLD--NLPDSMKNLERLSILKI 974

Query: 333  SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              NQ R L D    ++ L+ +    N +    R+I ++
Sbjct: 975  HTNQFRRLSDCVYEMTNLKEIGASFNSISAIYRDISKL 1012



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 138/251 (54%), Gaps = 3/251 (1%)

Query: 115 LSSLVSLDLSENR-IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           L +L  L LS N+ +  +P     L +LK+L +  ++I  LP++IG+L SL  L ++ N+
Sbjct: 712 LVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNK 771

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           I+ LP +   L  L EL    N +  LPDS G L +L  L + +N +  LP   G+ ++L
Sbjct: 772 INRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLTNL 831

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            E  +++N L  LPE+ G + +L VL ++ N ++ LP     L+SL  L + FN L+ +P
Sbjct: 832 SECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKKIP 891

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +     L K ++  N   L+ +P S+  L  LEEL+++NN I+ LP     L +L  L
Sbjct: 892 EKIGLLKNLTKFSLAQN--SLKIIPDSVTKLYELEELNMANNAIKRLPYCMGNLRKLMEL 949

Query: 354 RVQENPLEVPP 364
            +  N L+  P
Sbjct: 950 NLNSNKLDNLP 960



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 146/265 (55%), Gaps = 4/265 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LPD+   L++L  LD+ +  I  +P   G L SL++L + + ++ + P+S  ++ +
Sbjct: 633 NLTSLPDTFVNLANLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMAN 692

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDL-GSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           L  L++R  +++ L      LV LE L L G+ NL +LP++  +LI+LK+L+++ + +  
Sbjct: 693 LKRLEVRNTKVATL-FGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITA 751

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG   SL  L +  N++  LP + G++ +L  L    N I  LP +   L +L  L
Sbjct: 752 LPENIGNLKSLAILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVL 811

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N++ S+P++    T L +  I  NF  L  LP S GNL+ L  L +  N++  LPD
Sbjct: 812 RLNSNQITSLPDNFGKLTNLSECMI--NFNMLTRLPESFGNLKSLRVLWLKANRLESLPD 869

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +F  L+ L  L +  N L+  P  I
Sbjct: 870 NFIDLASLEHLFLDFNRLKKIPEKI 894



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 103  DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            + I  LPD+ GKL++L    ++ N +  +P + G L SL+ L L ANR+  LPD+  DL 
Sbjct: 816  NQITSLPDNFGKLTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLA 875

Query: 163  SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            SL +L L  N++  +P  +  L  L +  L  N+L  +PDS+  L  L++L +  N ++ 
Sbjct: 876  SLEHLFLDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKR 935

Query: 223  LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            LP+ +G    L EL ++ N+L  LP+++  +  L +L +  N  ++L   +  +++L+E+
Sbjct: 936  LPYCMGNLRKLMELNLNSNKLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEI 995

Query: 283  DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL-EMLEELDISNNQI 337
              SFN + ++   +     L ++N+  N  +++ LP +I  L + L  LD+  NQI
Sbjct: 996  GASFNSISAIYRDISKLKKLRRLNLYKN--NIKKLPCTIAELNDTLVLLDLRRNQI 1049



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 153/289 (52%), Gaps = 5/289 (1%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDL-SENRIVAVPATIGGLSSLKKL 144
           +  K G   L   N   + I  + D++G L SL +L+L     + ++P T   L++LKKL
Sbjct: 591 IECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKL 650

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           D+    I +LP+  G L SL  L ++  ++   P +   +  L+ L++ +  +++L    
Sbjct: 651 DICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLF-GF 709

Query: 205 GSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
            +L++L+ L +  N +LE LP       +L++L +  +++ ALPE +G + +L +L ++ 
Sbjct: 710 ENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQN 769

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N I +LP +   L SL EL    N++  +P+S      L  + + +N   + +LP + G 
Sbjct: 770 NKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSN--QITSLPDNFGK 827

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L  L E  I+ N +  LP+SF  L  LRVL ++ N LE  P N +++ +
Sbjct: 828 LTNLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLAS 876



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 151/302 (50%), Gaps = 44/302 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD------- 160
           L  ++G + SL  L +   R+  +P++   L++L+ LDL +N +  LPDS+G+       
Sbjct: 526 LGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNLRVLDLASNELSVLPDSLGNVVYSRDI 585

Query: 161 -----------LLSLVYLDLRGNQISALPVALSRLVRLEELDL-GSNNLSSLPDSIGSLI 208
                      L+SL  L+L  N I ++   +  L  LE L+L G  NL+SLPD+  +L 
Sbjct: 586 KNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLA 645

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN---- 264
           +LKKL +   ++++LP   G+  SL +L++   +L+  PE+   +  L+ L VR      
Sbjct: 646 NLKKLDICDANIQQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVAT 705

Query: 265 -------------------NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
                              N++ LP    +L +L++L +  +++ ++PE++    +L  +
Sbjct: 706 LFGFENLVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAIL 765

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            + NN   +  LP S G LE L EL    N+I +LPDSF  L  L VLR+  N +   P 
Sbjct: 766 WMQNN--KINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPD 823

Query: 366 NI 367
           N 
Sbjct: 824 NF 825



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 29/278 (10%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNLQ  +++ +   P SI       +L+L++N I A+P +I  L S++KL L+ N I  L
Sbjct: 71  LNLQCNMLEAVPEFPPSIR------TLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFL 124

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PDSI +L +L  L ++GNQ+  LP  LS L  L  LD+  N +  LP     L +L    
Sbjct: 125 PDSIAELSTLKLLSMQGNQLIELP-DLSGLPDLRHLDVAFNRIKELPRLSPKLATL---- 179

Query: 215 VETNDLEELPHTIGQC----SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             T     +      C    S L++L +  N++K +P  +G ++++E+L +++NNI ++P
Sbjct: 180 --TARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVP 237

Query: 271 TTMSSLSSLRELDVSFNELESVPESLC----------FATTLVKMNIGNNFADLRALPRS 320
            ++ SL +L++L +  N++  +P  L           F   L  +++ NN   +  +P+ 
Sbjct: 238 RSIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHFQKNLTVLDLSNN--KITQIPKY 295

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           I  L  L+ L++ +N+I +L  SF+ +  L+VL++  N
Sbjct: 296 ITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLN 333



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 159/334 (47%), Gaps = 68/334 (20%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL----------------------- 141
           IE +P  I +L++L  L L+ N+I A+P +I  L+ L                       
Sbjct: 359 IESIPREISELTNLEVLILNGNKIPALPKSIKHLAKLRILGLGRFGPENISDCEEYSRNE 418

Query: 142 -KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
            KK+    NRI  LPD+I +L +L  L+L G +I  LP  + RL ++++L L   N   L
Sbjct: 419 SKKISDDRNRIKRLPDTITELQNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQL 478

Query: 201 PDSIGSLISLKKLIVET-NDLEELPHTIGQCSSLRELRVD--YNRLKALPEAVGKIHTLE 257
           P+SI  + SL+ L  ++  +L  LP  +    +L+ L ++  Y+ L  L   VG I +L 
Sbjct: 479 PESICQIASLRILSCKSCRNLSSLPSGLSILKNLKVLVLNKCYSLL-GLGRNVGDIKSLR 537

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL----------------C---- 297
           VL VR   + +LP++  +L++LR LD++ NEL  +P+SL                C    
Sbjct: 538 VLRVRNIRLTELPSSFENLTNLRVLDLASNELSVLPDSLGNVVYSRDIKNNNVIECKSGL 597

Query: 298 --------FATTLVKM--NIGN----------NFADLRALPRSIGNLEMLEELDISNNQI 337
                   +   +V +  N+GN           + +L +LP +  NL  L++LDI +  I
Sbjct: 598 VSLRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANI 657

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           + LP+ F  L  L  L+++   LE  P +   M 
Sbjct: 658 QQLPEDFGKLQSLEQLQIKSVKLEKFPESCKNMA 691



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 166/336 (49%), Gaps = 48/336 (14%)

Query: 74  KLSLIKLAS-----LIEVSSKKGTRDLNLQNKLMDNIEWLP-------------DSIGKL 115
           +LS +KL S     LIE+    G  DL   +   + I+ LP             +SI K+
Sbjct: 130 ELSTLKLLSMQGNQLIELPDLSGLPDLRHLDVAFNRIKELPRLSPKLATLTARFNSIAKI 189

Query: 116 SSLVS--------LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            S+ S        LDL  N+I  +PA IG L+S++ L L  N I+E+P SI  L +L  L
Sbjct: 190 DSMCSPSLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQL 249

Query: 168 DLRGNQISALPVAL------SRLVRLEE----LDLGSNNLSSLPDSIGSLISLKKLIVET 217
            L  N+IS LP  L      S L+  ++    LDL +N ++ +P  I  L++LK L + +
Sbjct: 250 HLGSNKISKLPARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYITELVNLKVLNLRS 309

Query: 218 NDLEELPHTIGQCSSLRELRVDYN-RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           N +  L  +  +   L+ L++  N +L   P  +  + +L++L   +  I+ +P  +S L
Sbjct: 310 NKIALLRGSFKKMKGLKVLKLSLNQQLGHFPSQILNLKSLKILLASFCKIESIPREISEL 369

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML---EELDIS 333
           ++L  L ++ N++ ++P+S+     L  + +G      R  P +I + E     E   IS
Sbjct: 370 TNLEVLILNGNKIPALPKSIKHLAKLRILGLG------RFGPENISDCEEYSRNESKKIS 423

Query: 334 N--NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +  N+I+ LPD+   L  L +L +    +E+ P NI
Sbjct: 424 DDRNRIKRLPDTITELQNLEILNLDGVEIEILPENI 459



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 137/272 (50%), Gaps = 37/272 (13%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ---------------- 173
           ++P  I    +L  L L +N++ +LP SI +L  L  L+L+ N                 
Sbjct: 34  SLPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEFPPSIRTLNL 93

Query: 174 ----ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
               I A+P ++  L  +E+L L +N +  LPDSI  L +LK L ++ N L ELP   G 
Sbjct: 94  NKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPDLSG- 152

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS-SLSSLRELDVSFNE 288
              LR L V +NR+K LP    K+ T   L+ R+N+I ++ +  S SLS L++LD+  N+
Sbjct: 153 LPDLRHLDVAFNRIKELPRLSPKLAT---LTARFNSIAKIDSMCSPSLSYLKKLDLLGNQ 209

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF---- 344
           ++++P  +    ++  + +   F ++  +PRSI +L+ L++L + +N+I  LP       
Sbjct: 210 IKTIPAEIGNLNSVEMLYL--QFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGKA 267

Query: 345 ------RMLSRLRVLRVQENPLEVPPRNIVEM 370
                      L VL +  N +   P+ I E+
Sbjct: 268 KKSYLIHFQKNLTVLDLSNNKITQIPKYITEL 299



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 139/258 (53%), Gaps = 16/258 (6%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L LH+     LP  I    +L+ L L  NQ++ LP +++ L  L+ L+L  N L ++P+ 
Sbjct: 30  LSLHS-----LPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEF 84

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
             S+ +L    +  N ++ +P +I    S+ +L ++ N +  LP+++ ++ TL++LS++ 
Sbjct: 85  PPSIRTLN---LNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQG 141

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPE-SLCFATTLVKMNIGNNFADLRALPRSIG 322
           N + +LP  +S L  LR LDV+FN ++ +P  S   AT   +    N+ A + ++     
Sbjct: 142 NQLIELP-DLSGLPDLRHLDVAFNRIKELPRLSPKLATLTARF---NSIAKIDSMCSP-- 195

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           +L  L++LD+  NQI+ +P     L+ + +L +Q N +   PR+I  +     +   ++ 
Sbjct: 196 SLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNK 255

Query: 383 VEKRDAKTQPVKQKKSWV 400
           + K  A+    K KKS++
Sbjct: 256 ISKLPARLTG-KAKKSYL 272


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 161/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + + KLDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           +L  L LR N++SA+P  L++  +L+EL+L +N +S+LP+ +  SL++L  L +  N  +
Sbjct: 285 TLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   LR LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLNKIPEDVSGLVSLEVLILSNNL--LRNLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 461 ESLPNEIAYLRDLQRLILTNNQLSTLPRGIGHL 493



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 153/336 (45%), Gaps = 70/336 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L +L LSEN + ++P ++G L  L+ +DL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMVDLRHNKLREIPPVVYRLT 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+++   +  L  L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ + +L + +N L  LP+ +G + TL+ L +RYN +  +P T++  S L EL
Sbjct: 253 LPKEIGNCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNIISTLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNN--------FA-------------DLRALPRSIGNLEMLEELDI 332
                A  L K+N+ +N        F               L  +P  +  L  LE L +
Sbjct: 373 GIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLIL 432

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           SNN +R LP     L +LR L ++EN LE  P  I 
Sbjct: 433 SNNLLRNLPHGIGNLRKLRELDLEENKLESLPNEIA 468



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 99/336 (29%), Positives = 160/336 (47%), Gaps = 80/336 (23%)

Query: 95  LNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           L+LQ N+L+D    LPD+IG LS+L SL L  NR+ A+P T+   S L +L+L  N I  
Sbjct: 266 LDLQHNELLD----LPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIIST 321

Query: 154 LPD----SIGDLLSL--------------------VY----------------------- 166
           LP+    S+ +L SL                    +Y                       
Sbjct: 322 LPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVL 381

Query: 167 --LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+++ NQ+++LP+       + EL+L +N L+ +P+ +  L+SL+ LI+  N L  LP
Sbjct: 382 SKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLP 441

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           H IG    LREL ++ N+L++LP  +                       + L  L+ L +
Sbjct: 442 HGIGNLRKLRELDLEENKLESLPNEI-----------------------AYLRDLQRLIL 478

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDS 343
           + N+L ++P  +     L  + +G NF  L  LP  IG LE LEEL +++N  +  LP  
Sbjct: 479 TNNQLSTLPRGIGHLINLTHLGLGENF--LTQLPEEIGTLENLEELYLNDNPHLNSLPFE 536

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 537 LALCSKLSIMSIENCPLSTLPAQIVAGGPSFIIQFL 572



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 25/227 (11%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL    I  LP S+ +L  L  L L GN++ +LP  +  LV LE L L  N+L+SLPD
Sbjct: 104 RLDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPD 163

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+G+L  L+ + +  N L E+P  + + +SL  L + +NR+ ++ + +  +  L +LS+R
Sbjct: 164 SLGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIR 223

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N IKQLP  +  L +L  LDV+ N+LE                          LP+ IG
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEH-------------------------LPKEIG 258

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   + +LD+ +N++  LPD+   LS L+ L ++ N L   PR + +
Sbjct: 259 NCTQITKLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQ 305



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 25/148 (16%)

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++ + + L EL +  N+L++LP  VG +  LE L++  N++  LP ++ +L  LR +
Sbjct: 115 LPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMV 174

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L                         R +P  +  L  L  L +  N+I  +  
Sbjct: 175 DLRHNKL-------------------------REIPPVVYRLTSLTTLYLRFNRITSVEK 209

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             + LS L +L ++EN ++  P  I E+
Sbjct: 210 DIKNLSNLTMLSIRENKIKQLPAEIGEL 237


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  147 bits (372), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/286 (33%), Positives = 157/286 (54%), Gaps = 5/286 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL NK  + +  LP  IG+L +L  L+LS N+I  +P  I  L  L+ L
Sbjct: 67  EIGKLKNLQELNL-NK--NQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSL 123

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L  L +L L  NQ++ LP  + +L  L+ L+L  N + ++P  I
Sbjct: 124 YLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEI 183

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L  L+ L ++ N L  LP  I Q  +L+ L +  NRL   P+ + ++  L++L +  N
Sbjct: 184 EKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDN 243

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+ LD+S+N+L+++P+ +     L ++N+G  +  L  LP+ I  L
Sbjct: 244 QLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLG--YNQLTVLPKEIEQL 301

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L +  NQ+ VLP     L  L+VL +  N L   P+ I ++
Sbjct: 302 KNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQL 347



 Score =  147 bits (372), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 93/285 (32%), Positives = 154/285 (54%), Gaps = 5/285 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L +N++  +P  IG L  L+ L
Sbjct: 90  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWL 146

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 147 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEI 206

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L   P  I Q  +L+ L +  N+L  LP+ + ++  L++L + YN
Sbjct: 207 EQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYN 266

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K LP  +  L +L+EL++ +N+L  +P+ +     L  + +G  +  L  LP+ IG L
Sbjct: 267 QLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLG--YNQLTVLPKEIGQL 324

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           + L+ L ++NNQ+  LP     L  L+ L +  N L +  +  ++
Sbjct: 325 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQ 369



 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 140/251 (55%), Gaps = 2/251 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPK 112

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L  N L++LP  IG L  L+ L +  N L  LP  IGQ  +L+ L + 
Sbjct: 113 EIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLS 172

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           YN++K +P+ + K+  L+ L +  N +  LP  +  L +L+ L +  N L + P+ +   
Sbjct: 173 YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQL 232

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +N   L  LP+ I  L+ L+ LD+S NQ++ LP     L  L+ L +  N 
Sbjct: 233 KNLQLLYLYDN--QLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQ 290

Query: 360 LEVPPRNIVEM 370
           L V P+ I ++
Sbjct: 291 LTVLPKEIEQL 301



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/231 (33%), Positives = 128/231 (55%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            ++ LDL ANR   LP  IG L +L  L+L  NQ++ LP  + +L  L +L+L +N + +
Sbjct: 50  KVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKT 109

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P  I  L  L+ L +  N L  LP  IGQ   L+ L +  N+L  LP+ +G++  L+ L
Sbjct: 110 IPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 169

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           ++ YN IK +P  +  L  L+ L +  N+L ++P+ +     L  + +GNN   L   P+
Sbjct: 170 NLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLYLGNN--RLTTFPK 227

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            I  L+ L+ L + +NQ+ VLP   + L  L++L +  N L+  P+ I ++
Sbjct: 228 EIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQL 278



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 121/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L+ LP  IG L +L+K
Sbjct: 40  DLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRK 99

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +  N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 100 LNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQE 159

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L++S+N+++++P+ +     L  + + NN   L  LP+ I  L+ L+ L +
Sbjct: 160 IGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNN--QLTTLPKEIEQLKNLQTLYL 217

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NN++   P     L  L++L + +N L V P+ I ++
Sbjct: 218 GNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQL 255



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 94/173 (54%), Gaps = 2/173 (1%)

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           + L  ++ + + ++ L +  N  + LP  IG+  +L+EL ++ N+L  LP+ +G++  L 
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLR 98

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L++  N IK +P  +  L  L+ L +  N+L ++P+ +     L  + +  N   L  L
Sbjct: 99  KLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKN--QLTTL 156

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ L+ L++S NQI+ +P     L +L+ L +  N L   P+ I ++
Sbjct: 157 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQL 209


>gi|346224725|ref|ZP_08845867.1| RHS repeat-associated core domain-containing protein [Anaerophaga
           thermohalophila DSM 12881]
          Length = 1801

 Score =  147 bits (372), Expect = 8e-33,   Method: Composition-based stats.
 Identities = 100/326 (30%), Positives = 174/326 (53%), Gaps = 22/326 (6%)

Query: 72  GEKL------SLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
           GEK+      ++  L++L E+   +G+ +L            LP  IG L+ L  L L E
Sbjct: 428 GEKIDGNIPEAIFSLSNLKELYINRGSGNLTTT---------LPSEIGDLTQLERLSLPE 478

Query: 126 NRIVAVPATIGGLSSLKKLDL-HANRIIELPDSIGDLLSLVYLDLRGNQIS-ALPVALSR 183
                +P+ IG L++L+ LDL   N    LP  I +L++L + D+  NQIS ALPV +  
Sbjct: 479 IVEGTLPSEIGNLTNLEFLDLSKGNLSGSLPPEICNLINLRHFDVSDNQISGALPVNIGN 538

Query: 184 LVRLEELDLGSNNLS-SLPDSIGSLISLKKLIVETNDLE-ELPHTIGQCSSLRELRVDYN 241
           L ++  L+L  N+LS  +P SIG++  L+ L +  ND   E P TIG C+ +++LR++ N
Sbjct: 539 LSKVVTLNLSGNSLSGDIPVSIGNMAELEYLYLNNNDFAGEFPATIGNCTKIKDLRLNNN 598

Query: 242 RLKA-LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           +    +P+ +G + TL  L+VR N    LP  + +L++L  LD+  N L ++P+S+    
Sbjct: 599 QYSGDIPDGIGNMTTLNYLNVRNNQFSSLPNAVGNLTNLISLDLGKNNLTALPDSIITLK 658

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L      +N   +  +P+ +G+   L  +D+SNN+I + P+    L+RL  +    N +
Sbjct: 659 ALKTFRADSN--QISYIPQHLGSWPDLATIDLSNNRIEIFPEELSYLTRLSEVNFGNNNI 716

Query: 361 EVPPRNIVEMGAQAVVQYMADLVEKR 386
           +  P +I ++ + A V    + ++ +
Sbjct: 717 QELPASISQLRSSAYVNLSNNQIKSK 742



 Score =  128 bits (322), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 76/216 (35%), Positives = 125/216 (57%), Gaps = 4/216 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVA-VPATIGGLSSLKKLDLHANRII-ELPDSIGDLLSLV 165
           +P SIG ++ L  L L+ N      PATIG  + +K L L+ N+   ++PD IG++ +L 
Sbjct: 556 IPVSIGNMAELEYLYLNNNDFAGEFPATIGNCTKIKDLRLNNNQYSGDIPDGIGNMTTLN 615

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           YL++R NQ S+LP A+  L  L  LDLG NNL++LPDSI +L +LK    ++N +  +P 
Sbjct: 616 YLNVRNNQFSSLPNAVGNLTNLISLDLGKNNLTALPDSIITLKALKTFRADSNQISYIPQ 675

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            +G    L  + +  NR++  PE +  +  L  ++   NNI++LP ++S L S   +++S
Sbjct: 676 HLGSWPDLATIDLSNNRIEIFPEELSYLTRLSEVNFGNNNIQELPASISQLRSSAYVNLS 735

Query: 286 FNELES-VPESLCFATTLVKMNIGNNFADLRALPRS 320
            N+++S +PE  C +      N+ +NF     +P S
Sbjct: 736 NNQIKSKIPEQ-CLSGESNVFNLTHNFFSYSDIPVS 770



 Score =  117 bits (294), Expect = 9e-24,   Method: Composition-based stats.
 Identities = 86/269 (31%), Positives = 134/269 (49%), Gaps = 11/269 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVA-VPATIGGLSSLKKLDLH---ANRIIELPDSIGDLLS 163
           LP  +G L +L +  +   +I   +P  I  LS+LK+L ++    N    LP  IGDL  
Sbjct: 411 LPADLGNLDALTTFSIHGEKIDGNIPEAIFSLSNLKELYINRGSGNLTTTLPSEIGDLTQ 470

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS-SLPDSIGSLISLKKLIVETNDLE- 221
           L  L L       LP  +  L  LE LDL   NLS SLP  I +LI+L+   V  N +  
Sbjct: 471 LERLSLPEIVEGTLPSEIGNLTNLEFLDLSKGNLSGSLPPEICNLINLRHFDVSDNQISG 530

Query: 222 ELPHTIGQCSSLRELRVDYNRLKA-LPEAVGKIHTLEVLSVRYNNIK-QLPTTMSSLSSL 279
            LP  IG  S +  L +  N L   +P ++G +  LE L +  N+   + P T+ + + +
Sbjct: 531 ALPVNIGNLSKVVTLNLSGNSLSGDIPVSIGNMAELEYLYLNNNDFAGEFPATIGNCTKI 590

Query: 280 RELDVSFNELE-SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           ++L ++ N+    +P+ +   TTL  +N+ NN     +LP ++GNL  L  LD+  N + 
Sbjct: 591 KDLRLNNNQYSGDIPDGIGNMTTLNYLNVRNN--QFSSLPNAVGNLTNLISLDLGKNNLT 648

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPDS   L  L+  R   N +   P+++
Sbjct: 649 ALPDSIITLKALKTFRADSNQISYIPQHL 677


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  147 bits (371), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 141/256 (55%), Gaps = 2/256 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G  + L  L+L+ N++  +P     L+ L +L+L  N + +LPD I +   L  L
Sbjct: 159 VPLFLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSEL 218

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++ GNQ+ +LP  + RL  L  LD+  N L++LP+++G L +L  L +  N L  LP   
Sbjct: 219 EISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANF 278

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L + +N+L  LP    ++  L VL + +N + QLP  +   S L +L + +N
Sbjct: 279 GNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYN 338

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P+ +   T L  +NI +N  ++ ALP S+ NL  +  LD+S+ QI  LP     L
Sbjct: 339 ELTELPDDIGLLTELEVLNIAHN--NIGALPPSVANLTKMTRLDLSSTQIPYLPKFISNL 396

Query: 348 SRLRVLRVQENPLEVP 363
           +RL +L V+   +++P
Sbjct: 397 NRLCILDVRNTRMKIP 412



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LPDS  KL+ L  L+L  N++ ++P  +   + + +LDL  NR++ +P  +G+  
Sbjct: 108 NQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFT 167

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L  N++  LP   + L +L  L+L  N L  LPD I +   L +L +  N L  
Sbjct: 168 RLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGS 227

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+   L  L +  N L  LPE +G +  L +L +  N +  LP    +L  L  L
Sbjct: 228 LPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRL 287

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+L  +P        L  +++ +N   L  LP  I     L +L +  N++  LPD
Sbjct: 288 SLAHNQLSLLPPPAAQMQRLAVLDLSHN--RLMQLPNFICQFSHLNDLHLGYNELTELPD 345

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              +L+ L VL +  N +   P ++  +
Sbjct: 346 DIGLLTELEVLNIAHNNIGALPPSVANL 373



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/269 (35%), Positives = 152/269 (56%), Gaps = 2/269 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P    +L  L  LDLS  R+ ++P T+G L+ L +LDL  N +  LP SIGDL  L  L
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRL 103

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL+ NQ+  LP + ++L  L +L+LG N ++SLP+ + +   + +L +  N L  +P  +
Sbjct: 104 DLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFL 163

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L +L +  N+L+ LP     +  L  L++  N +KQLP  +++ S L EL++S N
Sbjct: 164 GNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGN 223

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+PE +     L  ++I  N   L  LP ++G+L+ L  LDI NN++  LP +F  L
Sbjct: 224 QLGSLPEYIGRLKELHHLDISGNM--LTTLPETLGDLQNLSILDIHNNRLTSLPANFGNL 281

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
            +L  L +  N L + P    +M   AV+
Sbjct: 282 GQLHRLSLAHNQLSLLPPPAAQMQRLAVL 310



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 143/266 (53%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+++G+L+ L  LDL  N + ++PA+IG LS L++LDL  N++  LPDS   L  L
Sbjct: 64  LQSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLPDSFAKLTGL 123

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  N++++LP  L+    + ELDL  N L  +P  +G+   L KL +  N LE LP
Sbjct: 124 TKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNLARNKLENLP 183

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
                 + L  L +  N LK LP+ +     L  L +  N +  LP  +  L  L  LD+
Sbjct: 184 PVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDI 243

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L ++PE+L     L  ++I NN   L +LP + GNL  L  L +++NQ+ +LP   
Sbjct: 244 SGNMLTTLPETLGDLQNLSILDIHNN--RLTSLPANFGNLGQLHRLSLAHNQLSLLPPPA 301

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             + RL VL +  N L   P  I + 
Sbjct: 302 AQMQRLAVLDLSHNRLMQLPNFICQF 327



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LPD I   S L  L++S N++ ++P  IG L  L  LD+  N +  LP+++GDL 
Sbjct: 200 NELKQLPDFIANFSQLSELEISGNQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQ 259

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LD+  N++++LP     L +L  L L  N LS LP     +  L  L +  N L +
Sbjct: 260 NLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQ 319

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ I Q S L +L + YN L  LP+ +G +  LEVL++ +NNI  LP ++++L+ +  L
Sbjct: 320 LPNFICQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRL 379

Query: 283 DVSFNELESVPESLCFATTLVKMNIGN 309
           D+S  ++  +P+ +     L  +++ N
Sbjct: 380 DLSSTQIPYLPKFISNLNRLCILDVRN 406



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 50/179 (27%), Positives = 84/179 (46%), Gaps = 23/179 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL----------------------- 144
           LP+++G L +L  LD+  NR+ ++PA  G L  L +L                       
Sbjct: 251 LPETLGDLQNLSILDIHNNRLTSLPANFGNLGQLHRLSLAHNQLSLLPPPAAQMQRLAVL 310

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+++LP+ I     L  L L  N+++ LP  +  L  LE L++  NN+ +LP S+
Sbjct: 311 DLSHNRLMQLPNFICQFSHLNDLHLGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSV 370

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
            +L  + +L + +  +  LP  I   + L  L V   R+K       +I +  V++  Y
Sbjct: 371 ANLTKMTRLDLSSTQIPYLPKFISNLNRLCILDVRNTRMKIPLALANRIESNAVMAGYY 429



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/153 (33%), Positives = 86/153 (56%), Gaps = 5/153 (3%)

Query: 215 VETNDLEE--LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
            E N++ E  +P    +   L  L + + RL++LPE +G++  L  L +R N +K LP +
Sbjct: 34  AEDNNIGEDRIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSLPAS 93

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  LS LR LD+ +N+LE++P+S    T L K+ +G N   + +LP  +     + ELD+
Sbjct: 94  IGDLSLLRRLDLKWNQLETLPDSFAKLTGLTKLELGYN--KMTSLPEVLTAFNHITELDL 151

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPP 364
           S+N++  +P      +RL  L +  N LE +PP
Sbjct: 152 SDNRLLRVPLFLGNFTRLTKLNLARNKLENLPP 184


>gi|157124572|ref|XP_001654111.1| shoc2 [Aedes aegypti]
 gi|108873917|gb|EAT38142.1| AAEL009928-PA [Aedes aegypti]
          Length = 472

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 28/303 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG L +L +LDLS N +  +PA IG   +L  LDL  N ++++P++IG+L 
Sbjct: 163 NKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLA 222

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           +L+ L LR NQ++++PV+L     ++E ++  N +S LPD +  SL +L  + +  N   
Sbjct: 223 NLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFH 282

Query: 222 ELPHTI-GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
             P     Q +++ EL    N L  LP+ +  +  LE+L +  N +K++P T+ +L  LR
Sbjct: 283 SYPSGGPAQFTNMVELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLR 342

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            LD+  N LES+P  +     L K+ + +N   L +LPR+IG+L  L  L +  N ++ L
Sbjct: 343 VLDLEENRLESLPSEIGLLHDLQKLILQSN--QLTSLPRTIGHLTNLTYLSVGENNLQFL 400

Query: 341 PDSFRMLSRLRVLRVQEN------------------------PLEVPPRNIVEMGAQAVV 376
           P+    L  L  L + +N                        PL   P  +V  G   V+
Sbjct: 401 PEEIGTLENLESLYINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVI 460

Query: 377 QYM 379
           QY+
Sbjct: 461 QYL 463



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 150/311 (48%), Gaps = 50/311 (16%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P S+   +SLV   L  N+I ++P  IG LS+LK L L+ N +  LPDS+ +L  L
Sbjct: 50  ITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQL 109

Query: 165 VYLDLRGNQISALPVA-----------------------LSRLVRLEELDLGSNNLSSLP 201
             LDLR N++S +P                         L  L  L  L L  N +  LP
Sbjct: 110 KVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELP 169

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
            +IG L++L  L +  N L+ LP  IG C +L  L + +N L  +PE +G +  L  L +
Sbjct: 170 SAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGL 229

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA---------------------- 299
           RYN +  +P ++ + + + E +V  N +  +P+ L  +                      
Sbjct: 230 RYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGP 289

Query: 300 ---TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
              T +V++N G N   L  LP  I  L+ LE L +SNN ++ +P++   L +LRVL ++
Sbjct: 290 AQFTNMVELNFGTN--SLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLE 347

Query: 357 ENPLEVPPRNI 367
           EN LE  P  I
Sbjct: 348 ENRLESLPSEI 358



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 140/267 (52%), Gaps = 4/267 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +PD I KL +L +L L  NRI  V   +  LS L  L L  N+I ELP +IG L+
Sbjct: 117 NKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLV 176

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N +  LP  +   V L  LDL  N+L  +P++IG+L +L +L +  N L  
Sbjct: 177 NLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTS 236

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEA-VGKIHTLEVLSVRYNNIKQLPTTM-SSLSSLR 280
           +P ++  C+ + E  V+ N +  LP+  +  +  L  +++  N     P+   +  +++ 
Sbjct: 237 IPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNMV 296

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           EL+   N L  +P+ +     L  + + NN   L+ +P +IGNL+ L  LD+  N++  L
Sbjct: 297 ELNFGTNSLTKLPDDIHCLQNLEILILSNNV--LKRIPNTIGNLKKLRVLDLEENRLESL 354

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P    +L  L+ L +Q N L   PR I
Sbjct: 355 PSEIGLLHDLQKLILQSNQLTSLPRTI 381



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 133/263 (50%), Gaps = 8/263 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS++ I  +P ++   +SL +  L+ N+I  LP  IG L +L  L L  N +++LP +
Sbjct: 43  LDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDS 102

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L  L +L+ LDL  N LS +PD I  L +L  L +  N ++ +   +   S L  L +  
Sbjct: 103 LQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRE 162

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++  LP A+G +  L  L + +N++K LP  + +  +L  LD+  N+L  +PE++    
Sbjct: 163 NKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLA 222

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENP 359
            L  M +G  +  L ++P S+ N   ++E ++  N I  LPD     LS L  + +  N 
Sbjct: 223 NL--MRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNA 280

Query: 360 LEVPPRNIVEMGAQAVVQYMADL 382
               P      G  A    M +L
Sbjct: 281 FHSYPS-----GGPAQFTNMVEL 298


>gi|428176940|gb|EKX45822.1| hypothetical protein GUITHDRAFT_58686, partial [Guillardia theta
           CCMP2712]
          Length = 417

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/253 (37%), Positives = 143/253 (56%), Gaps = 2/253 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I KLSSL  LDLS N +  VPAT+G L  L  L+L  N I  LPD+  DL++L  L 
Sbjct: 117 PKDIAKLSSLRRLDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILV 176

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQIS LP + S++  L EL+L  NNL  + DS  S+  LK++ + +N L  +P T+ 
Sbjct: 177 LTYNQISQLPQSFSKVSSLWELELSYNNLRDVSDSFRSMARLKRINLNSNRLLTIPKTLS 236

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
            C  L  L    N+LK +P  + K   ++ +++  N ++ +P ++ ++ SLR L++  N 
Sbjct: 237 LCLELETLTATSNQLKIIPSNLLKFPAMKEINLSQNLLETVPPSIQAMVSLRVLNLESNN 296

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L+   E +CF   L  +N+  NF  +R +P  + +L  L  LDIS N +  +    R L+
Sbjct: 297 LKVFDEKICFLNMLESVNLSRNF--IRCIPSEVQSLTNLTMLDISQNHLSAIAPEIRFLT 354

Query: 349 RLRVLRVQENPLE 361
           RLR L + +N L+
Sbjct: 355 RLRHLLLADNSLK 367



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 86/287 (29%), Positives = 151/287 (52%), Gaps = 2/287 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP     L++L  L   +N++  +   I  L  L+ L LH N++  LP +IG L 
Sbjct: 19  NQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEILWLHQNKLRSLPSTIGQLD 78

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            +  + L  N + ALP     L  L+E+ L +N   S P  I  L SL++L +  N+LE 
Sbjct: 79  RVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDIAKLSSLRRLDLSVNNLEF 138

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P T+G+   L  L +  N +++LP+    +  L +L + YN I QLP + S +SSL EL
Sbjct: 139 VPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYNQISQLPQSFSKVSSLWEL 198

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S+N L  V +S      L ++N+ +N   L  +P+++     LE L  ++NQ++++P 
Sbjct: 199 ELSYNNLRDVSDSFRSMARLKRINLNSN--RLLTIPKTLSLCLELETLTATSNQLKIIPS 256

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAK 389
           +      ++ + + +N LE  P +I  M +  V+   ++ ++  D K
Sbjct: 257 NLLKFPAMKEINLSQNLLETVPPSIQAMVSLRVLNLESNNLKVFDEK 303



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 149/265 (56%), Gaps = 6/265 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L +    LP+ I KL  L  L L +N++ ++P+TIG L  ++++ L  N +  LP  
Sbjct: 41  QNQLKN---LLPE-IYKLRQLEILWLHQNKLRSLPSTIGQLDRVRQMTLEDNMLEALPTH 96

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
              L SL  + L+ N   + P  +++L  L  LDL  NNL  +P ++G LI L  L +  
Sbjct: 97  FIFLTSLKEIRLQNNPYLSPPKDIAKLSSLRRLDLSVNNLEFVPATMGRLIDLSSLNLRQ 156

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N+++ LP T     +LR L + YN++  LP++  K+ +L  L + YNN++ +  +  S++
Sbjct: 157 NNIQSLPDTFSDLMNLRILVLTYNQISQLPQSFSKVSSLWELELSYNNLRDVSDSFRSMA 216

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L+ ++++ N L ++P++L     L  +   +N   L+ +P ++     ++E+++S N +
Sbjct: 217 RLKRINLNSNRLLTIPKTLSLCLELETLTATSN--QLKIIPSNLLKFPAMKEINLSQNLL 274

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEV 362
             +P S + +  LRVL ++ N L+V
Sbjct: 275 ETVPPSIQAMVSLRVLNLESNNLKV 299



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 150/277 (54%), Gaps = 2/277 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   I + +S+ SL++S N+I  +P     L++L  L  H N++  L   I  L  L  L
Sbjct: 1   LQTKIDEFTSVTSLNISCNQISGLPLQFFNLTNLTVLKSHQNQLKNLLPEIYKLRQLEIL 60

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++ +LP  + +L R+ ++ L  N L +LP     L SLK++ ++ N     P  I
Sbjct: 61  WLHQNKLRSLPSTIGQLDRVRQMTLEDNMLEALPTHFIFLTSLKEIRLQNNPYLSPPKDI 120

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + SSLR L +  N L+ +P  +G++  L  L++R NNI+ LP T S L +LR L +++N
Sbjct: 121 AKLSSLRRLDLSVNNLEFVPATMGRLIDLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYN 180

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++  +P+S    ++L ++ +   + +LR +  S  ++  L+ +++++N++  +P +  + 
Sbjct: 181 QISQLPQSFSKVSSLWELELS--YNNLRDVSDSFRSMARLKRINLNSNRLLTIPKTLSLC 238

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
             L  L    N L++ P N+++  A   +    +L+E
Sbjct: 239 LELETLTATSNQLKIIPSNLLKFPAMKEINLSQNLLE 275



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/270 (30%), Positives = 142/270 (52%), Gaps = 5/270 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DL+  N   +NI+ LPD+   L +L  L L+ N+I  +P +   +SSL +L+L  N + +
Sbjct: 148 DLSSLNLRQNNIQSLPDTFSDLMNLRILVLTYNQISQLPQSFSKVSSLWELELSYNNLRD 207

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           + DS   +  L  ++L  N++  +P  LS  + LE L   SN L  +P ++    ++K++
Sbjct: 208 VSDSFRSMARLKRINLNSNRLLTIPKTLSLCLELETLTATSNQLKIIPSNLLKFPAMKEI 267

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N LE +P +I    SLR L ++ N LK   E +  ++ LE +++  N I+ +P+ +
Sbjct: 268 NLSQNLLETVPPSIQAMVSLRVLNLESNNLKVFDEKICFLNMLESVNLSRNFIRCIPSEV 327

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-----FADLRALPRSIGNLEMLE 328
            SL++L  LD+S N L ++   + F T L  + + +N               +G +E L 
Sbjct: 328 QSLTNLTMLDISQNHLSAIAPEIRFLTRLRHLLLADNSLKFFPPFPPCFSPVLGLMENLR 387

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ELD+  NQ+  LP      S L+ +++Q N
Sbjct: 388 ELDLGRNQLSALPLDLSRCSNLQSIKLQSN 417


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 159/307 (51%), Gaps = 29/307 (9%)

Query: 82  SLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL 141
           +L E++  +    L+L   L+D+   LP  +G+L  L  L L  N+    P  + GL+ L
Sbjct: 77  ALPEIARLEDLAALDLSFNLLDD---LPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGL 133

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           + L L+ N +  +P  +G L  +  L+L GN++S++P  +  L RL  LDLG N L+ +P
Sbjct: 134 QVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIP 193

Query: 202 DSIGSLISLKKLI------------------------VETNDLEELPHTIGQCSSLRELR 237
            S+G +  L + +                        +  N L  LP   G  +SLRELR
Sbjct: 194 PSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELR 253

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           + +NRL  LP ++G +  L    +  N +  LP  +  L+ LREL +  N + ++P+++ 
Sbjct: 254 LYHNRLTGLPRSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIG 313

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
               L ++++ NN  +LRA+P +IG L+ L  LD+ NN++  LP +   L RL  L ++ 
Sbjct: 314 GLVRLTRLDLRNN--ELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRW 371

Query: 358 NPLEVPP 364
           NPL + P
Sbjct: 372 NPLALDP 378



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 130/240 (54%), Gaps = 1/240 (0%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK-LD 145
           S   G R++ + N   + +  +P  IG LS L +LDL  N +  +P ++G ++ L + L 
Sbjct: 148 SGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLY 207

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L  N+I  +PDS+  L  L YL++  N+++ALP     L  L EL L  N L+ LP SIG
Sbjct: 208 LSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG 267

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           +L  L++  +  N L  LP  IG  + LRELR+  NR+ ALP+ +G +  L  L +R N 
Sbjct: 268 ALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNE 327

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           ++ +P  +  L  L  LD+  N L  +P +L     L K+++  N   L  LP  + +LE
Sbjct: 328 LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVSSLE 387



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 130/262 (49%), Gaps = 9/262 (3%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPAT---IGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           D  GK+   VSL   E  + ++P     I  L  L  LDL  N + +LP  +G L  L  
Sbjct: 56  DMTGKV---VSLSAREQGMRSLPEALPEIARLEDLAALDLSFNLLDDLPADLGRLHRLTE 112

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L L  NQ S  P A+  L  L+ L L  N LS++P  +G L  ++ L +  N L  +P  
Sbjct: 113 LRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAE 172

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTL-EVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           IG  S L  L + +N L  +P ++G +  L   L +  N I  +P ++  L  LR L+++
Sbjct: 173 IGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSLCRLGHLRYLNIT 232

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N L ++PE      +L ++ + +N   L  LPRSIG L  L E  +  N++  LP+   
Sbjct: 233 DNRLTALPERFGDLASLRELRLYHN--RLTGLPRSIGALRELREAHLMGNRLTGLPEEIG 290

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L+ LR LR+ +N +   P  I
Sbjct: 291 GLADLRELRLMDNRVTALPDTI 312



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/210 (29%), Positives = 106/210 (50%), Gaps = 23/210 (10%)

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           +V L  R   + +LP AL  + RLE+L                      L +  N L++L
Sbjct: 61  VVSLSAREQGMRSLPEALPEIARLEDL--------------------AALDLSFNLLDDL 100

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +G+   L ELR+D N+    P+AV  +  L+VLS+  N +  +P+ +  L  +R L+
Sbjct: 101 PADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLN 160

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE-LDISNNQIRVLPD 342
           ++ N L SVP  +   + L  +++G+N  +L  +P S+G++  L   L +S+N+I  +PD
Sbjct: 161 LAGNRLSSVPAEIGALSRLHTLDLGHN--ELTDIPPSLGDVTGLSRYLYLSDNKITSVPD 218

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           S   L  LR L + +N L   P    ++ +
Sbjct: 219 SLCRLGHLRYLNITDNRLTALPERFGDLAS 248


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 133/245 (54%), Gaps = 27/245 (11%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  LDL   ++  +P  IG L +L++LDL +N++ + P  IG L  L +L
Sbjct: 54  LPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQRLKWL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ + LP  + +L +LE L+L +N L++LP+ IG L SLK+L +  N L  LP  I
Sbjct: 112 SLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L + YN+L  LP+ +GK+  LE L +  N +  LP  +  L  L EL++S N
Sbjct: 172 NKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +                         LR+LP+ IG L  LE+LD+++NQ+  LP     L
Sbjct: 232 Q-------------------------LRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTL 266

Query: 348 SRLRV 352
            RLR 
Sbjct: 267 QRLRA 271



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 124/224 (55%), Gaps = 4/224 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L    +  LP  IG L  L  LDL   +++ LP  + RL  LEELDL SN L+  P  
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQE 101

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L  LK L +E+N    LP  IG+   L  L +  N+L  LP  +GK+ +L+ L +  
Sbjct: 102 IGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSN 161

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  ++ L +L+ LD+ +N+L ++P+ +     L  +++G+N   L  LP+ IG 
Sbjct: 162 NQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN--QLGNLPQEIGK 219

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L EL++S NQ+R LP     L +L  L +  N L   P+ I
Sbjct: 220 LQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEI 263



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 73  EKLSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           E+L L KL +L  E+   +   +L+L +   + +   P  IG L  L  L L  N+   +
Sbjct: 65  ERLDLEKLTTLPKEIGRLQNLEELDLTS---NQLAKFPQEIGTLQRLKWLSLESNQFATL 121

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  IG L  L+ L+L  N++  LP+ IG L SL  L L  NQ+++LP  +++L  L+ LD
Sbjct: 122 PKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLD 181

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L +LP  IG L +L+ L + +N L  LP  IG+   L EL +  N+L++LP+ +G
Sbjct: 182 LFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIG 241

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           K+  LE L +  N + +LP  + +L  LR
Sbjct: 242 KLRKLEKLDLTSNQLVKLPQEIGTLQRLR 270



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 23/202 (11%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVE---------------------TNDLEELPHTIG 228
           L+LG   L+SLP  IG+L  L++L +E                     +N L + P  IG
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIG 103

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               L+ L ++ N+   LP+ +GK+  LE L++  N +  LP  +  L SL+ L +S N+
Sbjct: 104 TLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQ 163

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L S+P+ +     L  +++  N   L  LP+ IG L  LE LD+ +NQ+  LP     L 
Sbjct: 164 LTSLPQEINKLRNLQYLDLFYN--QLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQ 221

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
           +L  L +  N L   P+ I ++
Sbjct: 222 KLGELELSGNQLRSLPQEIGKL 243



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L + +  L +LP+ +G +  LE L +    +  LP  +  L +L ELD++ N+L   
Sbjct: 41  VRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKF 98

Query: 293 PESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           P+ +     L  +++  N FA    LP+ IG L  LE L++SNNQ+  LP+    L  L+
Sbjct: 99  PQEIGTLQRLKWLSLESNQFA---TLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLK 155

Query: 352 VLRVQENPLEVPPRNI 367
            L +  N L   P+ I
Sbjct: 156 RLYLSNNQLTSLPQEI 171


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/245 (36%), Positives = 133/245 (54%), Gaps = 27/245 (11%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  LDL   ++  +P  IG L +L++LDL +N++ + P  IG L  L +L
Sbjct: 54  LPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGTLQRLKWL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ + LP  + +L +LE L+L +N L++LP+ IG L SLK+L +  N L  LP  I
Sbjct: 112 SLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L+ L + YN+L  LP+ +GK+  LE L +  N +  LP  +  L  L EL++S N
Sbjct: 172 NKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +                         LR+LP+ IG L  LE+LD+++NQ+  LP     L
Sbjct: 232 Q-------------------------LRSLPQEIGKLRKLEKLDLTSNQLVKLPQEIGTL 266

Query: 348 SRLRV 352
            RLR 
Sbjct: 267 QRLRA 271



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 124/224 (55%), Gaps = 4/224 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L    +  LP  IG L  L  LDL   +++ LP  + RL  LEELDL SN L+  P  
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKFPQE 101

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG+L  LK L +E+N    LP  IG+   L  L +  N+L  LP  +GK+ +L+ L +  
Sbjct: 102 IGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSN 161

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  ++ L +L+ LD+ +N+L ++P+ +     L  +++G+N   L  LP+ IG 
Sbjct: 162 NQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSN--QLGNLPQEIGK 219

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L+ L EL++S NQ+R LP     L +L  L +  N L   P+ I
Sbjct: 220 LQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLPQEI 263



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 117/209 (55%), Gaps = 4/209 (1%)

Query: 73  EKLSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           E+L L KL +L  E+   +   +L+L +   + +   P  IG L  L  L L  N+   +
Sbjct: 65  ERLDLEKLTTLPKEIGRLQNLEELDLTS---NQLAKFPQEIGTLQRLKWLSLESNQFATL 121

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  IG L  L+ L+L  N++  LP+ IG L SL  L L  NQ+++LP  +++L  L+ LD
Sbjct: 122 PKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLD 181

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L +LP  IG L +L+ L + +N L  LP  IG+   L EL +  N+L++LP+ +G
Sbjct: 182 LFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIG 241

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           K+  LE L +  N + +LP  + +L  LR
Sbjct: 242 KLRKLEKLDLTSNQLVKLPQEIGTLQRLR 270



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 23/202 (11%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVE---------------------TNDLEELPHTIG 228
           L+LG   L+SLP  IG+L  L++L +E                     +N L + P  IG
Sbjct: 44  LNLGHYPLTSLPQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIG 103

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               L+ L ++ N+   LP+ +GK+  LE L++  N +  LP  +  L SL+ L +S N+
Sbjct: 104 TLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQ 163

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L S+P+ +     L  +++   +  L  LP+ IG L  LE LD+ +NQ+  LP     L 
Sbjct: 164 LTSLPQEINKLRNLQYLDLF--YNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQ 221

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
           +L  L +  N L   P+ I ++
Sbjct: 222 KLGELELSGNQLRSLPQEIGKL 243



 Score = 63.2 bits (152), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 71/136 (52%), Gaps = 6/136 (4%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L + +  L +LP+ +G +  LE L +    +  LP  +  L +L ELD++ N+L   
Sbjct: 41  VRILNLGHYPLTSLPQEIGTLQRLERLDLE--KLTTLPKEIGRLQNLEELDLTSNQLAKF 98

Query: 293 PESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           P+ +     L  +++  N FA    LP+ IG L  LE L++SNNQ+  LP+    L  L+
Sbjct: 99  PQEIGTLQRLKWLSLESNQFA---TLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLK 155

Query: 352 VLRVQENPLEVPPRNI 367
            L +  N L   P+ I
Sbjct: 156 RLYLSNNQLTSLPQEI 171


>gi|170029739|ref|XP_001842749.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
 gi|167864068|gb|EDS27451.1| leucine-rich repeat-containing protein 40 [Culex quinquefasciatus]
          Length = 612

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 156/275 (56%), Gaps = 4/275 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           + +++  L  L  L+L +N + A+P  IG L+ L KL L  N++ ELP+S  +L  L  L
Sbjct: 109 ISENVKNLGDLTVLNLQDNALTALPEGIGCLTKLTKLSLGRNKLSELPESFFNLRELKSL 168

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N  + +   +S L+ LE LD+  N+L+SLP  IG L+ L++L +  N L ELP+ I
Sbjct: 169 NLSHNDFAEIHANVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLTELPNDI 228

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L +L +  N LK LP  +G++  LE L V++N++ +LP   +   +L+EL +S N
Sbjct: 229 VNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHNDVGELP-DFTGCDALKELHISNN 287

Query: 288 ELESVPESLCFATTLVK-MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            ++S+P   C     +K +++ +N   +  LP  I  L  L  LD+SNN I  LP     
Sbjct: 288 FIKSIPADFCENLPQLKILDLRDN--KIEKLPDEISMLASLTRLDLSNNSISSLPSCLST 345

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           L+ L  L+V  NP+    R+I++ G Q +++ + D
Sbjct: 346 LAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKD 380



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 150/347 (43%), Gaps = 67/347 (19%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRIIELPDSIGDL 161
           +++  LPD  G   +L  L +S N I ++PA     L  LK LDL  N+I +LPD I  L
Sbjct: 265 NDVGELPDFTG-CDALKELHISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISML 323

Query: 162 LSLVYLDLRGNQISALPVALS---------------RLVRLEELDLGSNNL--------- 197
            SL  LDL  N IS+LP  LS               R +R + +  G+  +         
Sbjct: 324 ASLTRLDLSNNSISSLPSCLSTLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDG 383

Query: 198 --------------SSLPDSI------GSLISLKKLI-------------------VETN 218
                         S+ PD          ++S K LI                   +  N
Sbjct: 384 PGKSSEKVRVPFEESTFPDVYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDISKN 443

Query: 219 DLEELPHTIGQCSS-LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
            L E+P  +   +S + EL V +N LK +P    +   +  L+V  N +  LP  +  L 
Sbjct: 444 KLMEIPAGLTHLASIMTELNVSFNALKTIPMFFSQFERISYLNVSNNQLTDLPEVVGLLV 503

Query: 278 SLRELDVSFNELESVPESLCFATTL-VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           +LREL+V+ N+L+ +P  +     L + +  GN   +L A    +G L  L  LD++NN 
Sbjct: 504 TLRELNVANNQLKQIPPCVYELKGLEILLARGNKIEELDASEHGLGALPRLATLDVANNN 563

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           I+ +P    ML  +  L +  N    P   I+E G ++++ Y+ D +
Sbjct: 564 IKQVPPILGMLKNITTLEIIGNAFRQPRHQILEKGTESIMAYLRDRI 610



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 148/323 (45%), Gaps = 45/323 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-------- 159
           LP+ I  L +L  LDL++N +  +P  +G L  L+ L +  N + ELPD  G        
Sbjct: 224 LPNDIVNLRNLHKLDLAKNDLKLLPPVMGELRKLECLYVQHNDVGELPDFTGCDALKELH 283

Query: 160 ---------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                          +L  L  LDLR N+I  LP  +S L  L  LDL +N++SSLP  +
Sbjct: 284 ISNNFIKSIPADFCENLPQLKILDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCL 343

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR---------------LKALPEA 249
            +L  L  L V+ N +  +   I QC + R L+   +R                   P+ 
Sbjct: 344 STLAHLVSLQVDGNPIRSIRRDIIQCGTQRILKTLKDRDGPGKSSEKVRVPFEESTFPD- 402

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTM---SSLSSLRELDVSFNELESVPESLC-FATTLVKM 305
           V ++     + V   N+  +P  +   +  +S+  +D+S N+L  +P  L   A+ + ++
Sbjct: 403 VYQMKKGRSMIVSNKNLIDIPEQVFLDAMEASVYNIDISKNKLMEIPAGLTHLASIMTEL 462

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           N+   F  L+ +P      E +  L++SNNQ+  LP+   +L  LR L V  N L+  P 
Sbjct: 463 NVS--FNALKTIPMFFSQFERISYLNVSNNQLTDLPEVVGLLVTLRELNVANNQLKQIPP 520

Query: 366 NIVEMGAQAVVQYMADLVEKRDA 388
            + E+    ++    + +E+ DA
Sbjct: 521 CVYELKGLEILLARGNKIEELDA 543


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 137/251 (54%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L +L+L  N + A+P  +  L  L+KLDL  N++  LP  IG L SL  L
Sbjct: 201 LPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTL 260

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L++L L  N  ++LP  IG L +L+ L +  N L   P  I
Sbjct: 261 YLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEI 320

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L + YNRL  LPE +G++  L++L++ YN + +LP  +  L +L+ LD+   
Sbjct: 321 EQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAI 380

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L K+N       L  LP  IG ++ L+EL++  NQ+  LP     L
Sbjct: 381 QITTFPKEILQLQNLEKLNWSR--TQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRL 438

Query: 348 SRLRVLRVQEN 358
             L  L +  N
Sbjct: 439 QNLEELNLNSN 449



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 148/268 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L SL +L L  N++  +P  IG L +L+KL L  NR   LP  IG L 
Sbjct: 242 NQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQ 301

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GNQ++A P  + +L  L+ L+L  N L++LP+ IG L +L+ L +  N L +
Sbjct: 302 NLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTK 361

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G+  +L+ L +   ++   P+ + ++  LE L+     +  LP  +  + +L+EL
Sbjct: 362 LPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKEL 421

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++  N+L ++P+ +     L ++N+ +N     +LP+ IG L  L+ L + +N +  LP 
Sbjct: 422 NLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPK 481

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               LSRL  L +  N LE  P  I ++
Sbjct: 482 EIGQLSRLETLTLFRNSLETLPEEIGQL 509



 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 147/265 (55%), Gaps = 4/265 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SL L  N++ A P  I  L +L+ L+L  NR+  LP+ IG L +L  L
Sbjct: 293 LPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQIL 352

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  L +L  L+ LDL +  +++ P  I  L +L+KL      L  LP  I
Sbjct: 353 NLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEI 412

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVS 285
           GQ  +L+EL ++ N+L ALP+ +G++  LE L++  N+     LP  +  LS+L+ L + 
Sbjct: 413 GQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLD 472

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N L ++P+ +   + L  + +  N   L  LP  IG L  L ELD+S N +  +P    
Sbjct: 473 HNMLANLPKEIGQLSRLETLTLFRN--SLETLPEEIGQLWNLRELDLSYNPLSSIPKEIG 530

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  LR+L +++ PL   P  I E+
Sbjct: 531 QLKNLRILHLRKTPLARLPDEIGEL 555



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/277 (34%), Positives = 147/277 (53%), Gaps = 4/277 (1%)

Query: 96  NLQNKLMDNIEW--LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ   +D+ E   LP  + +L  L  LDL EN++  +P  IG L SL+ L L AN+   
Sbjct: 141 NLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRANQFAT 200

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  I  L +L  L+L  N+++ALP  + +L +L++LDL  N L++LP  IG L SL+ L
Sbjct: 201 LPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTL 260

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IG+  +L++L +  NR   LP+ +G++  L+ L +  N +   P  +
Sbjct: 261 YLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEI 320

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L+ L++S+N L ++PE +     L  +N+  N   L  LP+ +G L  L+ LD+ 
Sbjct: 321 EQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYN--QLTKLPKELGKLRNLKTLDLH 378

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             QI   P     L  L  L      L   P  I +M
Sbjct: 379 AIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQM 415



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 142/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L +L+L  N + A+P  +  L  L+KLDL  N++  LP  IG L SL  L
Sbjct: 132 LPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR NQ + LP  + +L  L+ L+L SN L++LP  +  L  L+KL +  N L  LP  I
Sbjct: 192 YLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL+ L +  N+L  LPE +GK+  L+ L +  N    LP  +  L +L+ L +  N
Sbjct: 252 GQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + P+ +     L  +N+  N   L  LP  IG L+ L+ L++S NQ+  LP     L
Sbjct: 312 QLTAFPKEIEQLQNLQILNLSYN--RLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKL 369

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +    +   P+ I+++
Sbjct: 370 RNLKTLDLHAIQITTFPKEILQL 392



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/325 (30%), Positives = 165/325 (50%), Gaps = 12/325 (3%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E+ +   L   ++   K   R LNL       +
Sbjct: 6   TMIHLQKITICLFILACFFAELQAEEVEQGTYTDLTKALQNPLK--VRVLNLS---FQKL 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
             LP  IG+L +L +LDL +N++  +P  I  L +L+ L L  N++  L + IG L  L 
Sbjct: 61  STLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEEIGQLQKLR 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LDLR NQ + LP  + +L  L+ L+L SN L++LP  +  L  L+KL +  N L  LP 
Sbjct: 121 ALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IGQ  SL+ L +  N+   LP+ + ++  L+ L++  N +  LP  M  L  L++LD+ 
Sbjct: 181 EIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKLQKLDLR 240

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L ++P+ +    +L  + +  N   L  LP  IG L  L++L +  N+   LP    
Sbjct: 241 ENQLTTLPKEIGQLKSLQTLYLLAN--QLTILPEEIGKLRNLQKLYLCENRFTTLPKDIG 298

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L+ L +  N L   P+ I ++
Sbjct: 299 QLQNLQSLYLYGNQLTAFPKEIEQL 323



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 133/248 (53%), Gaps = 27/248 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+LS N++  +P  +G L +LK LDLHA +I   P  I  L +L  L
Sbjct: 339 LPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKL 398

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN--DLEELPH 225
           +    Q++ LP  + ++  L+EL+L  N L++LP  IG L +L++L + +N      LP 
Sbjct: 399 NWSRTQLTTLPGEIGQMQNLKELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPK 458

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IGQ S+L+ L +D+N L  LP+ +G++  LE L++  N+++ LP  +  L +LRELD+S
Sbjct: 459 EIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLS 518

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           +N L S+P                         + IG L+ L  L +    +  LPD   
Sbjct: 519 YNPLSSIP-------------------------KEIGQLKNLRILHLRKTPLARLPDEIG 553

Query: 346 MLSRLRVL 353
            L  L  L
Sbjct: 554 ELQDLEEL 561



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/238 (30%), Positives = 120/238 (50%), Gaps = 25/238 (10%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L   ++  LP  IG+L +L  LDL  N+++ LP  + +L  L+ L L  N L+ L + 
Sbjct: 53  LNLSFQKLSTLPKEIGELQNLQTLDLFDNKLTVLPKEILQLQNLQMLGLCCNQLTILSEE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L  L+ L +  N    LP  I Q  +L+ L +D N L ALP+ + ++  L+ L +R 
Sbjct: 113 IGQLQKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRE 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L SL+ L +  N+         FAT                LP+ I  
Sbjct: 173 NQLTTLPKEIGQLKSLQTLYLRANQ---------FAT----------------LPKEILQ 207

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           L+ L+ L++ +N++  LP   R L +L+ L ++EN L   P+ I ++ +   +  +A+
Sbjct: 208 LQNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLAN 265



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 1/138 (0%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +   +LNL N   +    LP  IG+LS+L +L L  N +  +P  IG LS L+ L
Sbjct: 434 EIGRLQNLEELNL-NSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETL 492

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N +  LP+ IG L +L  LDL  N +S++P  + +L  L  L L    L+ LPD I
Sbjct: 493 TLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPLARLPDEI 552

Query: 205 GSLISLKKLIVETNDLEE 222
           G L  L++LI+  +  E+
Sbjct: 553 GELQDLEELILNPDTFEK 570


>gi|441611945|ref|XP_003271467.2| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Nomascus leucogenys]
          Length = 1089

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/289 (35%), Positives = 161/289 (55%), Gaps = 10/289 (3%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L  +  L+LS N++ A+PA +G L+ L++LD+  NR+  LPDS+  L  L  L++  
Sbjct: 131 VSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLNVDH 190

Query: 172 NQISALP---VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           NQ++A P   + L+ L  L+  D+ SN L  LP+ I +L +LK L +   +L  LP    
Sbjct: 191 NQLNAFPRQLLQLAALXELDVWDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFC 250

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           + +SL  L +D N L+ALP     +  L++L++  N  ++ P  +  L+ L EL +S N+
Sbjct: 251 ELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQ 310

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L SVP  +     L+ + + NN   +R LP SI  L  LEEL +  NQI VLPD+F  LS
Sbjct: 311 LTSVPSLISGLGRLLTLWLDNN--RIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLS 368

Query: 349 RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
           R+ + ++++NPL  PP  +   G   +  Y  +L     A +QP  Q +
Sbjct: 369 RVGLWKIKDNPLIQPPYEVCMKGIPYIAAYQKEL-----AHSQPAVQPR 412



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/192 (33%), Positives = 104/192 (54%), Gaps = 8/192 (4%)

Query: 187 LEELDLGSNNLSSLPDSIGS-LISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLK 244
           +E L+LG+N L  +P+ +GS L SL+ L++  N    LP  + +    L EL V +NRL 
Sbjct: 65  IEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 245 AL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           AL  E V  +  +  L++ +N +  LP  + +L+ L ELDVSFN L  +P+SL   + L 
Sbjct: 125 ALGAEVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLR 184

Query: 304 KMNIGNNFADLRALPR---SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            +N+ +N   L A PR    +  L  L+  D+S+N++R LP+    L  L++L +    L
Sbjct: 185 TLNVDHN--QLNAFPRQLLQLAALXELDVWDVSSNRLRGLPEDISALRALKILWLSGAEL 242

Query: 361 EVPPRNIVEMGA 372
              P    E+ +
Sbjct: 243 GTLPAGFCELAS 254


>gi|124003636|ref|ZP_01688485.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991205|gb|EAY30657.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 488

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/276 (32%), Positives = 150/276 (54%), Gaps = 21/276 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIGKL+ L +L LS NR+ ++P  I  L  +++L L+ N +  LP  +GD+L L  L
Sbjct: 197 LPESIGKLTQLKALYLSYNRLKSLPVAITKLGQIEELHLNHNLLQSLPAHLGDMLQLNAL 256

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP +LSRL  L+ELDL +N +  LP+    L +LK L     ++ ++   I
Sbjct: 257 YLADNQLTSLPASLSRLTHLQELDLINNPIQYLPEGFSQLKNLKALKTGGGNIHQMALQI 316

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L  L + + + +ALPE +G    L+ L++++++I  LP ++  L  L+ +D+S+N
Sbjct: 317 SKVPWLETLVIQHTQWQALPEWIGDFIQLQQLAIKHDHISVLPKSLIYLKKLKSIDLSYN 376

Query: 288 ELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEM 326
           +L  +P+S+     L + N   N                     +  L +LP +IG L  
Sbjct: 377 QLVDLPDSIGALEQLQEANFEGNRLLKIPETINNLKKLRFLHLGYNQLSSLPANIGQLHY 436

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           LE L + NNQ++ LP +     RL  L +  NP++ 
Sbjct: 437 LETLILENNQLKSLPVTQGDFPRLHTLLLAGNPIKA 472



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/299 (30%), Positives = 152/299 (50%), Gaps = 32/299 (10%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L +S+  +  +P+ +G L+SL+KL    N + +LP+SIG L  L  L L  N++ +LPVA
Sbjct: 164 LTISDLNLSTLPSQLGSLTSLQKLVASRNVLFKLPESIGKLTQLKALYLSYNRLKSLPVA 223

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +++L ++EEL L  N L SLP  +G ++ L  L +  N L  LP ++ + + L+EL +  
Sbjct: 224 ITKLGQIEELHLNHNLLQSLPAHLGDMLQLNALYLADNQLTSLPASLSRLTHLQELDLIN 283

Query: 241 NRLKALPEAV-------------GKIHT----------LEVLSVRYNNIKQLPTTMSSLS 277
           N ++ LPE               G IH           LE L +++   + LP  +    
Sbjct: 284 NPIQYLPEGFSQLKNLKALKTGGGNIHQMALQISKVPWLETLVIQHTQWQALPEWIGDFI 343

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L++L +  + +  +P+SL +   L  +++  N   L  LP SIG LE L+E +   N++
Sbjct: 344 QLQQLAIKHDHISVLPKSLIYLKKLKSIDLSYN--QLVDLPDSIGALEQLQEANFEGNRL 401

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV-EKRDAKTQPVKQ 395
             +P++   L +LR L +  N L   P NI ++       Y+  L+ E    K+ PV Q
Sbjct: 402 LKIPETINNLKKLRFLHLGYNQLSSLPANIGQL------HYLETLILENNQLKSLPVTQ 454



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 101/187 (54%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I++LP+   +L +L +L      I  +   I  +  L+ L +   +   LP+ IGD + L
Sbjct: 286 IQYLPEGFSQLKNLKALKTGGGNIHQMALQISKVPWLETLVIQHTQWQALPEWIGDFIQL 345

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L ++ + IS LP +L  L +L+ +DL  N L  LPDSIG+L  L++   E N L ++P
Sbjct: 346 QQLAIKHDHISVLPKSLIYLKKLKSIDLSYNQLVDLPDSIGALEQLQEANFEGNRLLKIP 405

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TI     LR L + YN+L +LP  +G++H LE L +  N +K LP T      L  L +
Sbjct: 406 ETINNLKKLRFLHLGYNQLSSLPANIGQLHYLETLILENNQLKSLPVTQGDFPRLHTLLL 465

Query: 285 SFNELES 291
           + N +++
Sbjct: 466 AGNPIKA 472


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++IG+L +L  L+L+ +++ ++P  IG L +L+ L L+ NR+  LP  IG L +L  L
Sbjct: 64  IPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRL 123

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP  + +L  L+ELDL SN  ++LP  IG L +L++L +  N    LP  I
Sbjct: 124 FLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEI 183

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +  NR   LP+ VG++ +LE L +  N    LP  +    ++R L+++ N
Sbjct: 184 GQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGN 243

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+ + +     L  +++  N      LP+ IG L+ LE L++S N+    P   R  
Sbjct: 244 QLTSLSKEIGQFQNLQGLDLSKN--RFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQ 301

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             +  L + +N L+  P+ I + 
Sbjct: 302 ENITWLYLDDNQLKALPKEIGQF 324



 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LS N++ ++P  IG L +L++LDL +NR   LP  IG L +L  L
Sbjct: 110 LPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQEL 169

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ + LP  + +L  L++LDL +N  ++LP  +G L SL++L +  N    LP  I
Sbjct: 170 DLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEI 229

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  ++R L +  N+L +L + +G+   L+ L +  N    LP  +  L +L  L++S N
Sbjct: 230 RRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGN 289

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
              + P+ +     +  + + +N   L+ALP+ IG  + LE L +  NQ+  LP     L
Sbjct: 290 RFTTFPKEVRRQENITWLYLDDN--QLKALPKEIGQFQHLEGLFLKGNQLTSLPKEIEQL 347

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N     P+ I ++
Sbjct: 348 QNLQQLDLSKNRFTTFPKEIEQL 370



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 140/259 (54%), Gaps = 6/259 (2%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+++ +LS L + +    ++ ++P  IG L +L+ L+L  +++  LP  IG L +L  L 
Sbjct: 46  PENVFELSFLFNRE----QLTSIPNAIGRLQNLRILELTGSQLTSLPKEIGRLQNLQGLF 101

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  N++S+LP  + +L  L+ L L  N L+SLP  IG L +L++L + +N    LP  IG
Sbjct: 102 LNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIG 161

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+EL +  N+   LP+ +G++  L+ L +  N    LP  +  L SL ELD+S N+
Sbjct: 162 QLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQ 221

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
             ++P+ +     +  +N+  N   L +L + IG  + L+ LD+S N+   LP     L 
Sbjct: 222 FTTLPKEIRRRQNIRWLNLAGN--QLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQ 279

Query: 349 RLRVLRVQENPLEVPPRNI 367
            L  L +  N     P+ +
Sbjct: 280 NLETLNLSGNRFTTFPKEV 298



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 89/173 (51%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L SL  LDLS N+   +P  I    +++ L+L  N++  L   IG   +L  L
Sbjct: 202 LPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGL 261

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + LP  + +L  LE L+L  N  ++ P  +    ++  L ++ N L+ LP  I
Sbjct: 262 DLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEI 321

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           GQ   L  L +  N+L +LP+ + ++  L+ L +  N     P  +  L +L+
Sbjct: 322 GQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQNLK 374


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 152/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +G+L +L  L+L  N++  +P  IG L +L+ L+L  N++  LP+ IG L +L  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQIL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           + +GNQ++  P  + +L +L+EL+LG N L++L + +  L +L+ L + +N L  LP  I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L+EL +   +LK LP+ + ++  L  L++ Y ++  LP  +  LS L++L +  N
Sbjct: 252 GQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P     L
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQL 369

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 370 QNLQELNLGFNQLTTLPQEIGQL 392



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 146/250 (58%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS +++  +   IG L +L+KL L+ N++  LP+ IG L +L  LDL  N+++ LP  
Sbjct: 53  LNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L+LG N L+ LPD +G L +L+ L ++ N L  LP  IGQ  +L+ L +D 
Sbjct: 113 IGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDL 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LPE +G++  L++L+ + N +   P  +  L  L+EL++ FN L ++ E +    
Sbjct: 173 NKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++ +N   L  LP+ IG L+ L+EL++   Q++ LP     L  LR L +    L
Sbjct: 233 NLQILDLISN--PLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHL 290

Query: 361 EVPPRNIVEM 370
            + P+ I ++
Sbjct: 291 TILPKEIGQL 300



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 167/334 (50%), Gaps = 28/334 (8%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSL-------ISLKKLIV----------------E 216
            + +L  L+ L+L  N L+ LP+ IG L       + L KL +                +
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQ 194

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N L   P  IGQ   L+EL + +NRL  L E V ++  L++L +  N +  LP  +  L
Sbjct: 195 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQL 254

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             L+EL++   +L+++P+ +     L  +N+  N+  L  LP+ IG L  L++L +  NQ
Sbjct: 255 QKLQELNLYGIQLKTLPQGIIQLQNLRGLNL--NYTHLTILPKEIGQLSKLQKLYLYGNQ 312

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  LP+    L +L+ L +  NPL   P+ I ++
Sbjct: 313 LTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQL 346



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 139/261 (53%), Gaps = 7/261 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +   P  IG+L  L  L+L  NR+  +   +  L +L+ LDL +N + 
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L+L G Q+  LP  + +L  L  L+L   +L+ LP  IG L  L+K
Sbjct: 246 TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQK 305

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ   L+EL +  N L+ LP+ + ++  L+ L +  N I   P  
Sbjct: 306 LYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKE 365

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL++ FN+L ++P+ +     L ++N+   F  L  LP+ +G L+ L +L++
Sbjct: 366 IGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNL--EFNQLATLPKEVGQLQKLRKLNL 423

Query: 333 SNNQIRVLPDSFRMLSRLRVL 353
            NN     P +   + R+R L
Sbjct: 424 YNN-----PIASEKIERIRKL 439


>gi|449279622|gb|EMC87166.1| Leucine-rich repeat protein SHOC-2 [Columba livia]
          Length = 582

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 158/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG    +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPEEIGSCMQITNLDLQHNELLDLPETIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   L+EL+L +NN+S+LP+ +  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPKSLAKCSELDELNLENNNISALPEGLLSSLVKLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLS 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLATLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C  +  L + +N L  LPE +G + +L  L +RYN +  +P +++  S L EL
Sbjct: 253 LPEEIGSCMQITNLDLQHNELLDLPETIGNLSSLSRLGLRYNRLSAIPKSLAKCSELDEL 312

Query: 283 DVSFNELESVPESL---------------CF----------------------------- 298
           ++  N + ++PE L               CF                             
Sbjct: 313 NLENNNISALPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 372

Query: 299 -----ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  L VL
Sbjct: 373 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVL 430

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 431 ILSNNLLKKLPHGI 444



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 156/294 (53%), Gaps = 40/294 (13%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLH 147
           +LNL+N   +NI  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++ 
Sbjct: 311 ELNLEN---NNISALPE--GLLSSLVKLTSLTLARNCFQSYP--VGGPSQFSTIYSLNME 363

Query: 148 ANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            NRI ++P  I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  
Sbjct: 364 HNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSG 423

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL+ LI+  N L++LPH IG    LREL ++ N+L++LP  +                
Sbjct: 424 LVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLESLPNEI---------------- 467

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
                  + L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE 
Sbjct: 468 -------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLEN 518

Query: 327 LEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 519 LEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+ +  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHMLPSAIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     LS L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLSSLATLYLRFNRITTVEKDI 211


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  147 bits (370), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 149/276 (53%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L SL L  N++  +P  IG L  L+ L
Sbjct: 89  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 146 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  + ++  L+ L++R N
Sbjct: 206 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L + P+ +     L  +++G+N   L  LP  IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSN--QLTTLPEGIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ LD+ +NQ+  LP     L  L+ L +  N L
Sbjct: 324 KNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 175/346 (50%), Gaps = 31/346 (8%)

Query: 51  SIIFRNKVPIMIMCMCCV-----GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNI 105
           ++I   K+ I +  + C       ++ E  +   LA  ++   K  T DL+      +  
Sbjct: 6   TLIHLQKISICLFLLTCFIYELQAEESESGTYTDLAKALQNPLKVRTLDLS-----ANRF 60

Query: 106 EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           + LP  IGKL +L  L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L 
Sbjct: 61  KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQ 120

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            L L  NQ++ LP  + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P 
Sbjct: 121 SLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK 180

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L + 
Sbjct: 181 EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLV 240

Query: 286 FNELESVPESLCFATTLVKMNIGNN----------------FADLRA-----LPRSIGNL 324
            N+L  +P  +     L  +N+ NN                  DLR+      P+ IG L
Sbjct: 241 SNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQL 300

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ LD+ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 301 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 346



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 158 EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  IGQ  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 275 EQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 335 QLTTLPQEIGQLQNLQELFLNNNQLSS 361


>gi|312094637|ref|XP_003148090.1| sur-8-PB [Loa loa]
          Length = 380

 Score =  146 bits (369), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 153/309 (49%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG L +L  L LSEN + ++P T+  L+ L+ LDL  N++ ELP  I  + SL  L
Sbjct: 50  LPNEIGNLVNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETL 109

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I ++   + RL RL+ +DL  N +  LP +IG + SL   ++  N L  +P  I
Sbjct: 110 WLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEI 169

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQCS L +L + +N L +LPEA+G +  L  L +RYN ++ LP+ M+    L E  V  N
Sbjct: 170 GQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESN 229

Query: 288 ELESVPESL------------------------------CF------------------- 298
           +LE++PE +                              C                    
Sbjct: 230 QLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSK 289

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           AT L K+N+  N   L ++P  +G    + EL++S NQ+RVLPD    L  L VL +  N
Sbjct: 290 ATGLTKLNLKENA--LTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNN 347

Query: 359 PLEVPPRNI 367
            L+  P  I
Sbjct: 348 MLKKLPSQI 356



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 134/226 (59%), Gaps = 2/226 (0%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL ++ I+ +P SI DL+ L  L L  N+++ LP  +  LV L++L L  N L+SLPD
Sbjct: 16  RLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPD 75

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           ++ +L  L+ L +  N L ELP  I Q SSL  L + YNR+ ++   +G++  L+++ +R
Sbjct: 76  TLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLR 135

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N I++LP T+  + SL    +S+N L ++PE +   + L ++++ +N  DL +LP ++G
Sbjct: 136 ENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHN--DLVSLPEAMG 193

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NL+ L  L I  N++R LP       +L    V+ N LE  P  ++
Sbjct: 194 NLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGML 239



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 122/243 (50%), Gaps = 49/243 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG++ SL+   LS N +  +P  IG  S L +LDL  N ++ LP+++G+L 
Sbjct: 137 NKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGNLQ 196

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLK---------- 211
           +L+ L +R N++  LP  ++   +LEE  + SN L +LP+  + SL +LK          
Sbjct: 197 NLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELT 256

Query: 212 --------------------------------------KLIVETNDLEELPHTIGQCSSL 233
                                                 KL ++ N L  +P  +G   ++
Sbjct: 257 VFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAM 316

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+L+ LP+ V K+  LEVL +  N +K+LP+ + SL  LRELD+  NEL+++P
Sbjct: 317 TELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIP 376

Query: 294 ESL 296
             +
Sbjct: 377 NEI 379



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 7/154 (4%)

Query: 103 DNIEWLPDS-IGKLSSLVSLDLSENRIVAVPATIGG---LSSLKKLDLHANRIIELPDSI 158
           + +E LP+  +  L +L +++LS N +   P+  GG    +S   +++  N I ++P  I
Sbjct: 229 NQLEALPEGMLASLPNLKTINLSRNELTVFPS--GGPQQFASCVSINMEHNAIAKIPFGI 286

Query: 159 -GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                 L  L+L+ N ++++P+ +   + + EL+L +N L  LPD +  L++L+ L++  
Sbjct: 287 FSKATGLTKLNLKENALTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSN 346

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           N L++LP  IG    LREL ++ N L A+P  +G
Sbjct: 347 NMLKKLPSQIGSLKKLRELDLEENELDAIPNEIG 380


>gi|393905431|gb|EJD73969.1| leucine-rich repeat protein SHOC-2 [Loa loa]
          Length = 498

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 104/309 (33%), Positives = 153/309 (49%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG L +L  L LSEN + ++P T+  L+ L+ LDL  N++ ELP  I  + SL  L
Sbjct: 53  LPNEIGNLVNLKKLGLSENGLTSLPDTLAALTRLETLDLRHNKLCELPPVIYQISSLETL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I ++   + RL RL+ +DL  N +  LP +IG + SL   ++  N L  +P  I
Sbjct: 113 WLRYNRIVSIGSEIGRLKRLKMIDLRENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQCS L +L + +N L +LPEA+G +  L  L +RYN ++ LP+ M+    L E  V  N
Sbjct: 173 GQCSELTQLDLQHNDLVSLPEAMGNLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESN 232

Query: 288 ELESVPESL------------------------------CF------------------- 298
           +LE++PE +                              C                    
Sbjct: 233 QLEALPEGMLASLPNLKTINLSRNELTVFPSGGPQQFASCVSINMEHNAIAKIPFGIFSK 292

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           AT L K+N+  N   L ++P  +G    + EL++S NQ+RVLPD    L  L VL +  N
Sbjct: 293 ATGLTKLNLKENA--LTSMPLDMGCWLAMTELNLSTNQLRVLPDDVDKLVNLEVLVLSNN 350

Query: 359 PLEVPPRNI 367
            L+  P  I
Sbjct: 351 MLKKLPSQI 359



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 107/348 (30%), Positives = 169/348 (48%), Gaps = 71/348 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG++ SL+   LS N +  +P  IG  S L +LDL  N ++ LP+++G+L 
Sbjct: 140 NKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHNDLVSLPEAMGNLQ 199

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLK---------- 211
           +L+ L +R N++  LP  ++   +LEE  + SN L +LP+  + SL +LK          
Sbjct: 200 NLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGMLASLPNLKTINLSRNELT 259

Query: 212 --------------------------------------KLIVETNDLEELPHTIGQCSSL 233
                                                 KL ++ N L  +P  +G   ++
Sbjct: 260 VFPSGGPQQFASCVSINMEHNAIAKIPFGIFSKATGLTKLNLKENALTSMPLDMGCWLAM 319

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+L+ LP+ V K+  LEVL +  N +K+LP+ + SL  LRELD+  NEL+++P
Sbjct: 320 TELNLSTNQLRVLPDDVDKLVNLEVLVLSNNMLKKLPSQIGSLKKLRELDLEENELDAIP 379

Query: 294 ESLCFATTLVKM------------NIGN--NFADLRA-------LPRSIGNLEMLEELDI 332
             + F T+L K+             IGN  N  DLRA       LP  IGNL+ L  L I
Sbjct: 380 NEIGFVTSLTKLWIQSNKLVGLPRTIGNLTNLTDLRAGENCLTSLPEEIGNLDSLRSLYI 439

Query: 333 SNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           ++N  +  LP    + + L ++ ++  PL   P  I   G   V+QY+
Sbjct: 440 NDNPSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYL 487



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 134/226 (59%), Gaps = 2/226 (0%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL ++ I+ +P SI DL+ L  L L  N+++ LP  +  LV L++L L  N L+SLPD
Sbjct: 19  RLDLSSSDIVSIPSSIRDLVQLTELFLYKNKLAVLPNEIGNLVNLKKLGLSENGLTSLPD 78

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           ++ +L  L+ L +  N L ELP  I Q SSL  L + YNR+ ++   +G++  L+++ +R
Sbjct: 79  TLAALTRLETLDLRHNKLCELPPVIYQISSLETLWLRYNRIVSIGSEIGRLKRLKMIDLR 138

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N I++LP T+  + SL    +S+N L ++PE +   + L ++++ +N  DL +LP ++G
Sbjct: 139 ENKIRELPPTIGQIKSLIVCLLSYNHLRTIPEEIGQCSELTQLDLQHN--DLVSLPEAMG 196

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NL+ L  L I  N++R LP       +L    V+ N LE  P  ++
Sbjct: 197 NLQNLIRLGIRYNKLRHLPSGMAFCHKLEEFIVESNQLEALPEGML 242


>gi|169260657|gb|ACA52055.1| densin 11-17 [Rattus norvegicus]
          Length = 447

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/278 (35%), Positives = 149/278 (53%), Gaps = 5/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +   L  LR L V EN L   PR   E+G++  V  M+
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPR---EIGSRKNVTVMS 356



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 150/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSRKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + RLRVL + +N L+  P +  ++   A + +++D
Sbjct: 370 GQMQRLRVLNLSDNRLKNLPFSFTKLKELAAL-WLSD 405



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSRKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG   ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSRKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 3/222 (1%)

Query: 167 LDLRGNQISALPVALSRLVR-LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           LD     +  +P  +    R LEEL L +N +  LP  + +  +L+KL +  NDL  LP 
Sbjct: 32  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 91

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +I    +L+EL +  N ++  PE +     L ++    N I +LP   + L +L +L ++
Sbjct: 92  SIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLN 151

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
              LE +P +      L  + +  N   L+ LP+S+  L  LE LD+ NN+   LP+   
Sbjct: 152 DAFLEFLPANFGRLVKLRILELRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
            +  LR L +  N L+V P +I ++     +    + +E  D
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251


>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
           27064]
          Length = 309

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/294 (31%), Positives = 153/294 (52%), Gaps = 29/294 (9%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L   L+D+   LP  +G+L  L  L L  N+    P  + GL+ L+ L L+ N +  +
Sbjct: 4   LDLSFNLLDD---LPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  +G L  +  L+L GN++S++P  +  L RL  LDLG N L+ +P S+G +  L + +
Sbjct: 61  PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYL 120

Query: 215 ------------------------VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
                                   +  N L  LP   G  +SLRELR+ +NRL  LP ++
Sbjct: 121 YLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI 180

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G +  L    +  N +  LP  +  L+ LREL +  N + ++P+++     L ++++ NN
Sbjct: 181 GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNN 240

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
             +LRA+P +IG L+ L  LD+ NN++  LP +   L RL  L ++ NPL + P
Sbjct: 241 --ELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDP 292



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/240 (35%), Positives = 130/240 (54%), Gaps = 1/240 (0%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK-LD 145
           S   G R++ + N   + +  +P  IG LS L +LDL  N +  +P ++G ++ L + L 
Sbjct: 62  SGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYLY 121

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L  N+I  +PDS+  L  L YL++  N+++ALP     L  L EL L  N L+ LP SIG
Sbjct: 122 LSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSIG 181

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           +L  L++  +  N L  LP  IG  + LRELR+  NR+ ALP+ +G +  L  L +R N 
Sbjct: 182 ALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNNE 241

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           ++ +P  +  L  L  LD+  N L  +P +L     L K+++  N   L  LP  + +LE
Sbjct: 242 LRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWVSSLE 301



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 138/272 (50%), Gaps = 27/272 (9%)

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           + +LDLS N +  +PA +G L  L +L L +N+    PD++  L  L  L L  N +S +
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS----- 232
           P  L  L  +  L+L  N LSS+P  IG+L  L  L +  N+L ++P ++G  +      
Sbjct: 61  PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYL 120

Query: 233 -------------------LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
                              LR L +  NRL ALPE  G + +L  L + +N +  LP ++
Sbjct: 121 YLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI 180

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L  LRE  +  N L  +PE +     L ++ + +N   + ALP +IG L  L  LD+ 
Sbjct: 181 GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDN--RVTALPDTIGGLVRLTRLDLR 238

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           NN++R +PD+   L RL  L ++ N L E+PP
Sbjct: 239 NNELRAVPDAIGRLDRLTHLDLRNNRLHELPP 270



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 111/226 (49%), Gaps = 22/226 (9%)

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           +  LDL  N +  LP  L RL RL EL L SN  S  PD++  L  L+ L +  N L  +
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL-REL 282
           P  +G    +R L +  NRL ++P  +G +  L  L + +N +  +P ++  ++ L R L
Sbjct: 61  PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYL 120

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNN--------FADL-------------RALPRSI 321
            +S N++ SVP+SLC    L  +NI +N        F DL               LPRSI
Sbjct: 121 YLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI 180

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           G L  L E  +  N++  LP+    L+ LR LR+ +N +   P  I
Sbjct: 181 GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTI 226



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 88/156 (56%), Gaps = 3/156 (1%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L++LP  +G+   L ELR+D N+    P+AV  +  L+VLS+  N +  +P+ +  L 
Sbjct: 9   NLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLR 68

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE-LDISNNQ 336
            +R L+++ N L SVP  +   + L  +++G+N  +L  +P S+G++  L   L +S+N+
Sbjct: 69  EIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHN--ELTDIPPSLGDVTGLSRYLYLSDNK 126

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           I  +PDS   L  LR L + +N L   P    ++ +
Sbjct: 127 ITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLAS 162


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 102/333 (30%), Positives = 172/333 (51%), Gaps = 27/333 (8%)

Query: 60  IMIMCMCCV-GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSL 118
            +I   C +  ++ E  +   LA  ++   K  T DL+      +  + LP  IGKL +L
Sbjct: 19  FLIHLSCEIQAEESESGTYTDLAKALQNPLKVRTLDLS-----ANRFKTLPKEIGKLKNL 73

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             L+L++N++  +P  IG L +L+KL+L AN+I  +P  I  L  L +L L  NQ++ LP
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLP 133

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +L+ L L  N L++LP  IG L +LK L +  N ++ +P  I +   L+ L +
Sbjct: 134 QEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGL 193

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D N+L  LP+ +G++  L+ L +  N +  LP  +  L +L++L +  N+L  +P  +  
Sbjct: 194 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 253

Query: 299 ATTLVKMNIGNN----------------FADLRA-----LPRSIGNLEMLEELDISNNQI 337
              L  +N+ NN                  DLR+      P+ IG L+ L+ LD+ +NQ+
Sbjct: 254 LKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQL 313

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+VL +  N L   P+ I ++
Sbjct: 314 TTLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQL 346



 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 94/281 (33%), Positives = 150/281 (53%), Gaps = 5/281 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R LNL     + I+ +P  I KL  L  L L +N++  +P  IG L  L+ L
Sbjct: 89  EIGQLKNLRKLNLS---ANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP  IG L +L  L+L  NQI  +P  + +L +L+ L L +N L++LP  I
Sbjct: 146 YLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + TN L  LP  IG   +L++L +  N+L  LP  +G++  L+ L++R N
Sbjct: 206 GQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  L   +  L +L+ LD+  N+L   P+ +     L  +++G+N   L  LP  IG L
Sbjct: 266 RLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSN--QLTTLPEGIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           + L+ L ++NNQ+  LP     L  L+ L +  N   +  +
Sbjct: 324 QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQFSIEEK 364


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N+    P  I  L SL  L
Sbjct: 42  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKL 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L   P  I
Sbjct: 102 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEI 161

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+EL +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 162 GKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 222 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 279

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 280 KNLKMLSLDANQLTALPKEI 299



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 129/232 (55%), Gaps = 2/232 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N++  +   I  L +L+KL L  N++   P  IG L +L  L
Sbjct: 111 LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQEL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+EL L +N L++ P  IG L  L+ L +  N L  +P+ I
Sbjct: 171 YLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+EL +D N+L  +P+ +G++  L+VL + YN  K +P     L +L+ L +  N
Sbjct: 231 GKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN 290

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L ++P+ +     L  +N+  N   L  +P+ IG L+ L+ L + NNQ  +
Sbjct: 291 QLTALPKEIGKLKNLKMLNLDAN--QLITIPKEIGQLQNLQTLYLRNNQFSI 340



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 5/250 (2%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++ A+P  IG L +L+ LDL  N++I LP  I  L +L  L L  NQ    P  + 
Sbjct: 34  LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIE 93

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L +L L +N L+ LP  IG L +L++L +  N L+ +   I Q  +L++L +D N+
Sbjct: 94  QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQ 153

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L A P+ +GK+  L+ L +  N +   P  +  L +L+EL +S N+L + P+ +     L
Sbjct: 154 LTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKL 213

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + +G+N   L  +P  IG L+ L+EL++  NQ+  +P     L  L+VL +  N  + 
Sbjct: 214 QWLGLGDN--QLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKT 271

Query: 363 PPRNIVEMGA 372
            P   VE G 
Sbjct: 272 IP---VEFGQ 278



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 79/258 (30%), Positives = 139/258 (53%), Gaps = 2/258 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I +L SL  L LS N++  +P  IG L +L++L+L  N++  +   I  L +L  L
Sbjct: 88  FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 147

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++A P  + +L  L+EL L +N L++ P  IG L +L++L +  N L   P  I
Sbjct: 148 YLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 207

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L +  N+L  +P  +GK+  L+ L++  N +  +P  +  L +L+ L +S+N
Sbjct: 208 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 267

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + +++P        L  +++  N   L ALP+ IG L+ L+ L++  NQ+  +P     L
Sbjct: 268 QFKTIPVEFGQLKNLKMLSLDAN--QLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQL 325

Query: 348 SRLRVLRVQENPLEVPPR 365
             L+ L ++ N   +  +
Sbjct: 326 QNLQTLYLRNNQFSIEEK 343



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 111/215 (51%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +  + L +  L L   ++ ALP  + +L  L+ LDL  N L  LP  I  L +L++
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N  +  P  I Q  SL +L +  N+L  LP  +G++  L+ L++  N +K +   
Sbjct: 78  LFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKE 137

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +  N+L + P+ +     L ++ + NN   L   P+ IG L+ L+EL +
Sbjct: 138 IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNN--QLTTFPKEIGKLQNLQELYL 195

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNNQ+   P     L +L+ L + +N L   P  I
Sbjct: 196 SNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230


>gi|260832209|ref|XP_002611050.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
 gi|229296420|gb|EEN67060.1| hypothetical protein BRAFLDRAFT_206003 [Branchiostoma floridae]
          Length = 454

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/278 (33%), Positives = 148/278 (53%), Gaps = 2/278 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP ++  L SL  LD+S+N I  +P +I    +L  ++   N + +LPD    LL+L  L
Sbjct: 75  LPPAVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTEL 134

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL RL+ L++  N++ +LP SI  LI L++L +  ND  ELP  +
Sbjct: 135 YLNDTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNNDFSELPEVV 194

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              SSL+EL VD N +   P+A+  +  L  L    N ++ LP  +  L+ + +L +S N
Sbjct: 195 CHMSSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEVEHLTKMTDLHLSTN 254

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P  +   T LV + + +N   L +LP SIG L  L+ELD+S N +  LP +  +L
Sbjct: 255 LLQDLPAGIGALTQLVVLKVDDN--QLLSLPHSIGGLASLQELDVSYNDLEHLPPTIGLL 312

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
            RLR L   EN L   P  +    +  V+   ++ +E+
Sbjct: 313 RRLRTLIADENCLMELPAELGSCSSMTVLSVRSNQLER 350



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/306 (32%), Positives = 154/306 (50%), Gaps = 13/306 (4%)

Query: 76  SLIKLASLIEVS-SKKGTRDLNLQNKLMDNIEW----------LPDSIGKLSSLVSLDLS 124
           ++  L SL E+  SK G RDL    K   N+ +          LPD   +L +L  L L+
Sbjct: 78  AVASLVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTELYLN 137

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
           +  +  +P   G L+ LK L++  N +  LP SI  L+ L  LD+  N  S LP  +  +
Sbjct: 138 DTFMDYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNNDFSELPEVVCHM 197

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+EL + SN + + P +I  L  L  L    N LE+LP  +   + + +L +  N L+
Sbjct: 198 SSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEVEHLTKMTDLHLSTNLLQ 257

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP  +G +  L VL V  N +  LP ++  L+SL+ELDVS+N+LE +P ++     L  
Sbjct: 258 DLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQELDVSYNDLEHLPPTIGLLRRLRT 317

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +    N   L  LP  +G+   +  L + +NQ+  LPD    +  L+V+ V +N LE  P
Sbjct: 318 LIADENC--LMELPAELGSCSSMTVLSVRSNQLERLPDEIGRIPNLKVINVSDNRLEFLP 375

Query: 365 RNIVEM 370
            N  ++
Sbjct: 376 FNFTKL 381



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 146/265 (55%), Gaps = 5/265 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +L L +  MD   +LP + G+L+ L  L++ EN +  +P +I  L  L++LD+  N   E
Sbjct: 133 ELYLNDTFMD---YLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNNDFSE 189

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+ +  + SL  L +  N I   P A+  L RL  LD   N L  LP+ +  L  +  L
Sbjct: 190 LPEVVCHMSSLQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEVEHLTKMTDL 249

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + TN L++LP  IG  + L  L+VD N+L +LP ++G + +L+ L V YN+++ LP T+
Sbjct: 250 HLSTNLLQDLPAGIGALTQLVVLKVDDNQLLSLPHSIGGLASLQELDVSYNDLEHLPPTI 309

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  LR L    N L  +P  L   +++  +++ +N   L  LP  IG +  L+ +++S
Sbjct: 310 GLLRRLRTLIADENCLMELPAELGSCSSMTVLSVRSN--QLERLPDEIGRIPNLKVINVS 367

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQEN 358
           +N++  LP +F  L +L  L + EN
Sbjct: 368 DNRLEFLPFNFTKLKKLWALWLAEN 392



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 2/249 (0%)

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           HAN     P+      SL  L L  NQI  LP  L     L++L L  N L  LP ++ S
Sbjct: 22  HANLEHAPPEIFEYTKSLEELYLDSNQIRDLPRPLFMCHGLQKLGLSDNELLMLPPAVAS 81

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L+SL +L +  N + +LP +I  C +L  +    N L  LP+   ++  L  L +    +
Sbjct: 82  LVSLTELDISKNGIRDLPESIKACKNLTYVEASVNPLGKLPDGFTQLLNLTELYLNDTFM 141

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LP     L+ L+ L+V  N ++++P+S+     L ++++GNN  D   LP  + ++  
Sbjct: 142 DYLPGNFGRLTRLKVLEVRENHMKTLPKSISRLILLERLDMGNN--DFSELPEVVCHMSS 199

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L+EL + +N I   P + R L RL  L   +N LE  P  +  +     +    +L++  
Sbjct: 200 LQELWVDSNAIHTFPQAIRYLQRLSFLDASKNQLEDLPEEVEHLTKMTDLHLSTNLLQDL 259

Query: 387 DAKTQPVKQ 395
            A    + Q
Sbjct: 260 PAGIGALTQ 268


>gi|327279924|ref|XP_003224705.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Anolis carolinensis]
          Length = 1010

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 9/280 (3%)

Query: 116 SSLVSLDLSENRIVA-----VPATIGGLSSLKKLDLHANRIIELPD-SIGDLLSLVYLDL 169
             L  L+LS N++ A     +PA +  L  L++LDL  NR+  LP+ S+  L  L  LD+
Sbjct: 129 GQLRKLNLSHNQLGAESEGALPAGLAHLRCLEELDLSFNRLRRLPERSLAPLQRLRALDV 188

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNL-SSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
             NQ+ A P AL  L  LEELD   N L  +LP+ I +L  LK L +    LE LP  + 
Sbjct: 189 DHNQLGAFPNALLSLGALEELDCSGNRLLRALPEGISALHRLKVLWLSGTGLEALPEGLC 248

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           + ++L  L +D NRL ALP   G +  L++L++  N +   PT + +L  L EL +S N+
Sbjct: 249 RLAALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPTAILALPGLEELYLSRNQ 308

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L  +P  +     L  + + NN   LR LP ++  L  LEEL +  NQI +LP+ F  LS
Sbjct: 309 LSLLPGGVSQLQQLRTLWLDNN--RLRFLPDAVVQLRQLEELVLQGNQIAILPEGFGQLS 366

Query: 349 RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           R+ + ++++NPL  PP  +   G   +  Y  +L   R A
Sbjct: 367 RVSLWKIKDNPLIQPPYEVCMKGIPYIAAYQKELAHSRPA 406



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 1/191 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
            P+++  L +L  LD S NR++ A+P  I  L  LK L L    +  LP+ +  L +L  
Sbjct: 196 FPNALLSLGALEELDCSGNRLLRALPEGISALHRLKVLWLSGTGLEALPEGLCRLAALES 255

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L L GN++ ALP     L RL+ L+L SN LS  P +I +L  L++L +  N L  LP  
Sbjct: 256 LMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPTAILALPGLEELYLSRNQLSLLPGG 315

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           + Q   LR L +D NRL+ LP+AV ++  LE L ++ N I  LP     LS +    +  
Sbjct: 316 VSQLQQLRTLWLDNNRLRFLPDAVVQLRQLEELVLQGNQIAILPEGFGQLSRVSLWKIKD 375

Query: 287 NELESVPESLC 297
           N L   P  +C
Sbjct: 376 NPLIQPPYEVC 386



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 119/249 (47%), Gaps = 21/249 (8%)

Query: 139 SSLKKLDLHANRIIELPD----SIGDLLSLVYLDLRGNQISALP--VALSRLVRLEELDL 192
           S L  L L    + ELP+    ++G  LS   L LR N+++ LP   AL  LVRL ELDL
Sbjct: 52  SRLSSLALVGRGLEELPEGLCAAVGGELSA--LSLRRNRLAQLPPPSALRHLVRLSELDL 109

Query: 193 GSNNLSSLPDSIGSLI----SLKKLIVETNDL-----EELPHTIGQCSSLRELRVDYNRL 243
             N L  L D   +L      L+KL +  N L       LP  +     L EL + +NRL
Sbjct: 110 SHNRLRGLRDEGRALALLGGQLRKLNLSHNQLGAESEGALPAGLAHLRCLEELDLSFNRL 169

Query: 244 KALPE-AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE-LESVPESLCFATT 301
           + LPE ++  +  L  L V +N +   P  + SL +L ELD S N  L ++PE +     
Sbjct: 170 RRLPERSLAPLQRLRALDVDHNQLGAFPNALLSLGALEELDCSGNRLLRALPEGISALHR 229

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  + +      L ALP  +  L  LE L +  N++  LP  F  L RL++L +  N L 
Sbjct: 230 LKVLWLSGT--GLEALPEGLCRLAALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLS 287

Query: 362 VPPRNIVEM 370
             P  I+ +
Sbjct: 288 DFPTAILAL 296



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/147 (38%), Positives = 85/147 (57%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
            +E LP+ + +L++L SL L  NR+VA+PA  GGL  LK L+L +N + + P +I  L  
Sbjct: 239 GLEALPEGLCRLAALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPTAILALPG 298

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  NQ+S LP  +S+L +L  L L +N L  LPD++  L  L++L+++ N +  L
Sbjct: 299 LEELYLSRNQLSLLPGGVSQLQQLRTLWLDNNRLRFLPDAVVQLRQLEELVLQGNQIAIL 358

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAV 250
           P   GQ S +   ++  N L   P  V
Sbjct: 359 PEGFGQLSRVSLWKIKDNPLIQPPYEV 385



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 3/110 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL + L+ +    P +I  L  L  L LS N++  +P  +  L  L+ L L  NR+  L
Sbjct: 279 LNLSSNLLSDF---PTAILALPGLEELYLSRNQLSLLPGGVSQLQQLRTLWLDNNRLRFL 335

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           PD++  L  L  L L+GNQI+ LP    +L R+    +  N L   P  +
Sbjct: 336 PDAVVQLRQLEELVLQGNQIAILPEGFGQLSRVSLWKIKDNPLIQPPYEV 385


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/303 (34%), Positives = 163/303 (53%), Gaps = 14/303 (4%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +L  +I+ ++++    LNL  K +     L   I +L+ L  LDL  N++ A+P+ IG L
Sbjct: 5   ELLQIIQQAAEEQVTSLNLSGKGLTT---LASEIRQLTKLTRLDLYNNQLSALPSEIGQL 61

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           S L +L+L  N++  LP  I  L +L  LDL GNQ+  LP  + +L  L ELDL  N LS
Sbjct: 62  SHLTRLNLGDNQLKVLPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLS 121

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP  I  L +LK+  +  N L  LP  IGQ S+L +L +  N+L  LP  +G++  L  
Sbjct: 122 ALPSEIWQLFNLKEFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTK 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L ++ N +  LP  +  LS+L EL +  N+L  +P  +   T L+++N+  N  +L ALP
Sbjct: 182 LYLQDNQLTVLPPEIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGN--ELSALP 239

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
             IG+L ML  + +  N     P+ +        L +  NPL  PP  I++ G  A + Y
Sbjct: 240 PEIGHLRMLAAIILEEN-----PEEWWY----DGLYLGGNPLTSPPPEILKQGIDATLAY 290

Query: 379 MAD 381
           + +
Sbjct: 291 LRE 293


>gi|324501497|gb|ADY40666.1| Protein lap1 [Ascaris suum]
          Length = 1224

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 157/268 (58%), Gaps = 5/268 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL+    +++  LP+ I + + L  LDLS N I  +P TI  L+S+  L L+   + +
Sbjct: 87  ELNLKG---NDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQ 143

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L +L  L++R N +  +P ++S+L +L+ LDLG N L  LP  IG L +L++L
Sbjct: 144 MPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQEL 203

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ NDLE LP +I QC SL++L V  N+L  LP+ +G +  L  L+V +N ++ LPT++
Sbjct: 204 YVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSV 263

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L  L V  N +  +  ++   T L ++ +  N   L  +P S+GNL+ L  L++ 
Sbjct: 264 GHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENL--LTEVPTSLGNLKALRTLNLD 321

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            NQ++ +P +      L VL +++N LE
Sbjct: 322 KNQLKEIPSTIGGCISLSVLSLRDNLLE 349



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 146/278 (52%), Gaps = 2/278 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I  L  L  L+L  N +  +P  I   + LK LDL +N I  LP +I  L S+ +L
Sbjct: 75  VPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    ++ +P+ +  L  L  L++  N L ++P SI  L  L++L +  N+L++LP  I
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+EL VD N L+ALPE++ +  +L+ L V  N +  LP  +  L  L +L VS N
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHN 254

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P S+     L  + +  N   +  L  ++G+   L EL ++ N +  +P S   L
Sbjct: 255 CLQVLPTSVGHLKKLAILKVDRNA--ITQLTPAVGSCTALSELYLTENLLTEVPTSLGNL 312

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
             LR L + +N L+  P  I    + +V+    +L+E+
Sbjct: 313 KALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQ 350



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 113/191 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  IG LS+L  L + +N + A+P +I    SL++LD+  N+++ LPD IGDL 
Sbjct: 185 NELDDLPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLE 244

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  N +  LP ++  L +L  L +  N ++ L  ++GS  +L +L +  N L E
Sbjct: 245 QLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTE 304

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P ++G   +LR L +D N+LK +P  +G   +L VLS+R N ++QLP  +  L +LR L
Sbjct: 305 VPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIGRLENLRVL 364

Query: 283 DVSFNELESVP 293
           DV  N L  +P
Sbjct: 365 DVCNNRLNFLP 375



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/272 (31%), Positives = 142/272 (52%), Gaps = 9/272 (3%)

Query: 121 LDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           LD  +  + +VP  I     +L++  L  N I +L   +     L  L L  N+I  +P 
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            ++ L+ LEEL+L  N++S LP+ I     LK L + +N +  LP TI   +S+  L ++
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
              L  +P  +G +  L  L VR N ++ +P ++S L+ L+ LD+  NEL+ +P  +   
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLL 197

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L ++ +  N  DL ALP SI     L++LD+S N++ VLPD    L +L  L V  N 
Sbjct: 198 SNLQELYVDQN--DLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNC 255

Query: 360 LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
           L+V P ++  +   A+++        R+A TQ
Sbjct: 256 LQVLPTSVGHLKKLAILKV------DRNAITQ 281



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 138/275 (50%), Gaps = 28/275 (10%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +++   +  R L ++  L+  I   P SI +L+ L  LDL  N +  +P+ IG LS+L++
Sbjct: 146 LDIGHLRNLRSLEVRENLLRTI---PPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQE 202

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L +  N +  LP+SI    SL  LD+  N++  LP  +  L +L +L +  N L  LP S
Sbjct: 203 LYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTS 262

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +G L  L  L V+ N + +L   +G C++L EL +  N L  +P ++G +  L  L++  
Sbjct: 263 VGHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDK 322

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K++P+T+    SL  L +  N LE                          LP  IG 
Sbjct: 323 NQLKEIPSTIGGCISLSVLSLRDNLLEQ-------------------------LPLEIGR 357

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           LE L  LD+ NN++  LP +  +L  L+ L + E+
Sbjct: 358 LENLRVLDVCNNRLNFLPFTINVLFNLQALWLSES 392


>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 311

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 139/241 (57%), Gaps = 2/241 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +LDLS NR   +P  IG L +L++L+L+ N++  LP  IG L +L  L+L  NQI  +P 
Sbjct: 53  TLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPK 112

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L +L+ L L +N L++LP  IG L +L+ L + TN L  LP  IG   +L++L + 
Sbjct: 113 EIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLV 172

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N+L  LP  +G++  L+ L++R N +  L   +  L +L+ LD+  N+L + P+ +   
Sbjct: 173 SNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQL 232

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  +++G+N   L  LP  IG L+ L+ LD+ +NQ+  LP     L  L+ L +  N 
Sbjct: 233 KNLQVLDLGSN--QLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNNQ 290

Query: 360 L 360
           L
Sbjct: 291 L 291



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 137/233 (58%), Gaps = 2/233 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
            + LP  IGKL +L  L+L++N++  +P  IG L +LK L+L  N+I  +P  I  L  L
Sbjct: 61  FKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 120

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+ LDL +N L++LP  IG L +L+ L + +N L  LP
Sbjct: 121 QSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILP 180

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IGQ  +L+ L +  NRL  L + + ++  L+ L +R N +   P  +  L +L+ LD+
Sbjct: 181 NEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDL 240

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
             N+L ++PE +     L  +++ +N   L  LP+ IG L+ L+EL ++NNQ+
Sbjct: 241 GSNQLTTLPEGIGQLKNLQTLDLDSN--QLTTLPQEIGQLQNLQELFLNNNQL 291



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 114/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + I+ +P  I KL  L SL L  N++  +P  IG L +L+ L
Sbjct: 90  EIGQLKNLKSLNLS---YNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 146

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L++L   I
Sbjct: 147 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 206

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L + +N L   P  I Q  +L+ L +  N+L  LPE +G++  L+ L +  N
Sbjct: 207 EQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 266

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+EL ++ N+L S
Sbjct: 267 QLTTLPQEIGQLQNLQELFLNNNQLSS 293



 Score =  115 bits (288), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 123/230 (53%), Gaps = 2/230 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           ++ LDL ANR   LP  IG L +L  L+L  NQ++ LP  + +L  L+ L+L  N + ++
Sbjct: 51  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI 110

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  I  L  L+ L ++ N L  LP  IGQ  +L+ L +  NRL  LP+ +G +  L+ L 
Sbjct: 111 PKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLY 170

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N +  LP  +  L +L+ L++  N L ++ + +     L  +++ +N   L   P+ 
Sbjct: 171 LVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSN--QLTTFPKE 228

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           I  L+ L+ LD+ +NQ+  LP+    L  L+ L +  N L   P+ I ++
Sbjct: 229 IEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIGQL 278



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 115/218 (52%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL  N+   LP  + +L  L+EL+L  N L++LP  IG L +LK 
Sbjct: 40  DLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLKS 99

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N ++ +P  I +   L+ L +D N+L  LP+ +G++  L+ L +  N +  LP  
Sbjct: 100 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQE 159

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +  N+L  +P  +     L  +N+ NN   L  L + I  L+ L+ LD+
Sbjct: 160 IGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNN--RLTTLSKEIEQLQNLKSLDL 217

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+   P     L  L+VL +  N L   P  I ++
Sbjct: 218 RSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQL 255



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 48/173 (27%), Positives = 98/173 (56%), Gaps = 2/173 (1%)

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           + L  ++ + + ++ L +  N  + LP  IG+  +L+EL ++ N+L  LP+ +G++  L+
Sbjct: 39  TDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKNLK 98

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L++ YN IK +P  +  L  L+ L +  N+L ++P+ +     L  +++  N   L  L
Sbjct: 99  SLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTN--RLTTL 156

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG+L+ L++L + +NQ+ +LP+    L  L+ L ++ N L    + I ++
Sbjct: 157 PQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL 209


>gi|260812952|ref|XP_002601184.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
 gi|229286475|gb|EEN57196.1| hypothetical protein BRAFLDRAFT_214669 [Branchiostoma floridae]
          Length = 865

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 150/275 (54%), Gaps = 2/275 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD + KL++++ L L +  +  VP  +  LS L++LDL  NR I LP  +  L ++  L
Sbjct: 43  LPDELYKLNNIIVLSLRQCELGTVPPAVLKLSQLEELDLSWNRGIHLPKELSGLANIRVL 102

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L G  ++ +P+ + RL +LE L+L SN L +LP  +G L ++K L +    L  LP  +
Sbjct: 103 KLWGTDMATVPMVMCRLKQLEWLNLSSNPLQTLPAEVGQLTNVKHLDLSCCQLNTLPPEV 162

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ + L  L + YN L+ LP  VG+++ ++ L++    +  LP  +  L+ L  LD+S N
Sbjct: 163 GRLTKLEWLYLCYNPLQTLPTEVGQLNNVKQLNLSLCELHTLPPEVWRLTQLEWLDLSSN 222

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+++P  +   T +   ++G +   LR LP  +G L  LE L++ +N ++ LP     L
Sbjct: 223 PLQTLPAEVGQLTNV--KHLGLSHCQLRTLPPEVGRLTQLEWLNLRSNPLQALPAEVGQL 280

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
                L V ENPL  PP  +   G  A+ +Y  +L
Sbjct: 281 PNKANLDVSENPLIKPPPEVCSQGVTAIRRYFDEL 315



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 63/190 (33%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L+++  LDLS  ++  +P  +G L+ L+ L L  N +  LP  +G L ++  L
Sbjct: 135 LPAEVGQLTNVKHLDLSCCQLNTLPPEVGRLTKLEWLYLCYNPLQTLPTEVGQLNNVKQL 194

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L   ++  LP  + RL +LE LDL SN L +LP  +G L ++K L +    L  LP  +
Sbjct: 195 NLSLCELHTLPPEVWRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLGLSHCQLRTLPPEV 254

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS--LSSLRELDVS 285
           G+ + L  L +  N L+ALP  VG++     L V  N + + P  + S  ++++R     
Sbjct: 255 GRLTQLEWLNLRSNPLQALPAEVGQLPNKANLDVSENPLIKPPPEVCSQGVTAIRRY--- 311

Query: 286 FNELESVPES 295
           F+ELE   E+
Sbjct: 312 FDELERSEEN 321


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  146 bits (368), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/280 (33%), Positives = 152/280 (54%), Gaps = 4/280 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 74  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 133

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 134 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 193

Query: 213 LIV--ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           L +  +      LP  I Q  +L+EL + +NRL  LP+ +G++  L +L +  N +  LP
Sbjct: 194 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 253

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+ I   + L++L
Sbjct: 254 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPKEITQFQNLQKL 311

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +S NQ+  LP     L +L  L +  N L   P  I ++
Sbjct: 312 HLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQL 351



 Score =  145 bits (366), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/304 (31%), Positives = 152/304 (50%), Gaps = 50/304 (16%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 63  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 122

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 123 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 182

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 183 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 242

Query: 260 SVRYN-------NIKQ----------------LPTTMSSLSSLRELDVSFNELESVPESL 296
            +  N        I Q                LP  ++ L +L+EL++ +N  E+ P+ +
Sbjct: 243 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEI 302

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                L K+++  N   L  LP+ IG L+ LE L + +NQ+  LP+  + L  L+ L + 
Sbjct: 303 TQFQNLQKLHLSRN--QLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLH 360

Query: 357 ENPL 360
            NPL
Sbjct: 361 NNPL 364



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 143/252 (56%), Gaps = 4/252 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 56  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 115

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 116 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 175

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 176 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 235

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 236 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 293

Query: 359 PLEVPPRNIVEM 370
             E  P+ I + 
Sbjct: 294 RFEAFPKEITQF 305



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 118/230 (51%), Gaps = 28/230 (12%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL    ++ +  LP  IG+L +L  L LS NR+  +P  IG L SL+KL
Sbjct: 138 EIGKLQNLQELNL---FVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKL 194

Query: 145 -----------------------DLHA--NRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
                                  +LH   NR+  LP  IG L +L  LDL  N+++ LP 
Sbjct: 195 SLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPK 254

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            + +L  L  LDL  N L+ LP  I  L +L++L +E N  E  P  I Q  +L++L + 
Sbjct: 255 EIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLS 314

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            N+L  LP+ +G++  LE L + +N +  LP  +  L +L++L +  N L
Sbjct: 315 RNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 364


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 159/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 314

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP+ IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 315 YQN--RLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 372

Query: 368 VEM 370
            ++
Sbjct: 373 KQL 375



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 153/278 (55%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 116 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 233 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 292

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L ++P+ +     L K+++  N   L  LP+ IG
Sbjct: 293 YNRFEAFPKEITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRN--QLTTLPKEIG 350

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 351 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 388



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 146/288 (50%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 64  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 123

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 124 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 183

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 184 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 243

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 244 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 301

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++  LP     L  L+ L +  N L   P+ I
Sbjct: 302 EITQFQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQLTTLPKEI 349



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 237 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 294

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 295 RFEAFPKEITQFQNLQVL----DLYQNR 318


>gi|424841835|ref|ZP_18266460.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320033|gb|EJF52954.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 509

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/332 (33%), Positives = 176/332 (53%), Gaps = 52/332 (15%)

Query: 85  EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-------- 135
           E+   KG + LN++ N+L D    LPDS+  L  L  LD+S+NR+  +P  +        
Sbjct: 34  EIGRSKGMKQLNIEDNRLKD----LPDSLANLGQLEWLDISDNRLSPLPKVLFQLRKLNW 89

Query: 136 -----GGLSSLK----------KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
                 GLS L           +LDL  N++ ELP++ G L +L  L L  NQ+SALP +
Sbjct: 90  LDLSNNGLSELGEELAAWEELMRLDLKNNQLQELPNNFGQLKALRKLLLERNQLSALPAS 149

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
             +L +L++LDL  N  + LP+ IG L +LK+L +  N + +L   +GQ S+L EL+ + 
Sbjct: 150 FGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSISANPMPQLAKVLGQLSNLEELQAEG 209

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
             L+ +PE +G+++ L+ L + YN +K L   + S S+L +LD+  N LE +P +L    
Sbjct: 210 LGLEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQ 269

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISN----------------------NQIR 338
            L  +N+ +N   L  LP  +  ++ LEELD+SN                      NQ+R
Sbjct: 270 QLKVLNLEDN--PLGELPLFLQEIQALEELDMSNCNLVNLGAGLSLPALHWLDLSANQLR 327

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP +F  L+ L  L +++N L+  P+ + E+
Sbjct: 328 DLPSNFGQLTALSWLDLRDNQLQKWPKALEEL 359



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/291 (32%), Positives = 158/291 (54%), Gaps = 5/291 (1%)

Query: 82  SLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL 141
            L E+ ++K  + L+   K    ++ LP  IG+   +  L++ +NR+  +P ++  L  L
Sbjct: 8   QLAELLAQKSLKKLDASRK---GLQELPREIGRSKGMKQLNIEDNRLKDLPDSLANLGQL 64

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           + LD+  NR+  LP  +  L  L +LDL  N +S L   L+    L  LDL +N L  LP
Sbjct: 65  EWLDISDNRLSPLPKVLFQLRKLNWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQELP 124

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           ++ G L +L+KL++E N L  LP + GQ   L++L +  N    LPE +G++  L+ LS+
Sbjct: 125 NNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKALKQLSI 184

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N + QL   +  LS+L EL      LE VPE +     L  + +G N   L++L  ++
Sbjct: 185 SANPMPQLAKVLGQLSNLEELQAEGLGLEEVPEEIGQLNNLQSLFLGYN--RLKSLAANL 242

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           G+   LE+LD+ NN++  LP +     +L+VL +++NPL   P  + E+ A
Sbjct: 243 GSCSALEQLDLGNNRLEKLPLNLARCQQLKVLNLEDNPLGELPLFLQEIQA 293



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 151/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +P+ IG+L++L SL L  NR+ ++ A +G  S+L++LDL  NR+ +LP ++     L
Sbjct: 212 LEEVPEEIGQLNNLQSLFLGYNRLKSLAANLGSCSALEQLDLGNNRLEKLPLNLARCQQL 271

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  N +  LP+ L  +  LEELD+ + NL +L   + SL +L  L +  N L +LP
Sbjct: 272 KVLNLEDNPLGELPLFLQEIQALEELDMSNCNLVNLGAGL-SLPALHWLDLSANQLRDLP 330

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
              GQ ++L  L +  N+L+  P+A+ ++  +  L +  N ++Q+  +      L ELD+
Sbjct: 331 SNFGQLTALSWLDLRDNQLQKWPKALEELSQIRQLLLAGNFLRQINLSELDWPELEELDL 390

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NEL  +         L ++N+  N   L  LP     L  LEELD+S+NQ+  LP S 
Sbjct: 391 SKNELTELSGQWDKLPQLRQLNLEKN--QLAQLPEDWQPLSNLEELDLSDNQLDSLPQSL 448

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             L +++ L ++ N     P+ ++ +  Q    Y+++
Sbjct: 449 GKLDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLSE 485


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/233 (39%), Positives = 129/233 (55%), Gaps = 2/233 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
            SLDL  NR+  +PA IG    L +L L  NR+ ELP  +  L  L  LDL  NQ++ LP
Sbjct: 19  TSLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLTQLP 78

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             ++RL  L  LDL SN L+ LP   G L  L +L ++ N L  LP  IG+ + L EL +
Sbjct: 79  AVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNL 138

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            +N+L+ALP  +GK+  +  L +R N ++ LP  +  + +L  L++  NEL S+P  +  
Sbjct: 139 HHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGK 198

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
              LVK+N+  N   L  LP  IG L  L  LD+S+N +  LP     LS LR
Sbjct: 199 LRQLVKLNLAAN--RLTTLPPEIGQLTRLGTLDLSHNPLEHLPPQLSQLSGLR 249



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 111/194 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  + KL+ L  LDLS N++  +PA +  L  L  LDLH+NR+ +LP   G L 
Sbjct: 49  NRLAELPSELAKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLT 108

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L+ L+L+GNQ+  LP  + +L +L EL+L  N L +LP  IG L ++ KL +  N L  
Sbjct: 109 KLIRLNLQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRS 168

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N L +LP  +GK+  L  L++  N +  LP  +  L+ L  L
Sbjct: 169 LPPEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTL 228

Query: 283 DVSFNELESVPESL 296
           D+S N LE +P  L
Sbjct: 229 DLSHNPLEHLPPQL 242


>gi|324500178|gb|ADY40092.1| Protein lap1 [Ascaris suum]
          Length = 1428

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 157/268 (58%), Gaps = 5/268 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL+    +++  LP+ I + + L  LDLS N I  +P TI  L+S+  L L+   + +
Sbjct: 87  ELNLKG---NDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLNDISLTQ 143

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L +L  L++R N +  +P ++S+L +L+ LDLG N L  LP  IG L +L++L
Sbjct: 144 MPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQEL 203

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ NDLE LP +I QC SL++L V  N+L  LP+ +G +  L  L+V +N ++ LPT++
Sbjct: 204 YVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSV 263

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L  L V  N +  +  ++   T L ++ +  N   L  +P S+GNL+ L  L++ 
Sbjct: 264 GHLKKLAILKVDRNAITQLTPAVGSCTALSELYLTENL--LTEVPTSLGNLKALRTLNLD 321

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            NQ++ +P +      L VL +++N LE
Sbjct: 322 KNQLKEIPSTIGGCISLSVLSLRDNLLE 349



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 146/278 (52%), Gaps = 2/278 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I  L  L  L+L  N +  +P  I   + LK LDL +N I  LP +I  L S+ +L
Sbjct: 75  VPTDIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHL 134

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    ++ +P+ +  L  L  L++  N L ++P SI  L  L++L +  N+L++LP  I
Sbjct: 135 GLNDISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEI 194

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S+L+EL VD N L+ALPE++ +  +L+ L V  N +  LP  +  L  L +L VS N
Sbjct: 195 GLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHN 254

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P S+     L  + +  N   +  L  ++G+   L EL ++ N +  +P S   L
Sbjct: 255 CLQVLPTSVGHLKKLAILKVDRNA--ITQLTPAVGSCTALSELYLTENLLTEVPTSLGNL 312

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
             LR L + +N L+  P  I    + +V+    +L+E+
Sbjct: 313 KALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQ 350



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 117/199 (58%), Gaps = 3/199 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L +  +D+   LP  IG LS+L  L + +N + A+P +I    SL++LD+  N+++ L
Sbjct: 180 LDLGHNELDD---LPSEIGLLSNLQELYVDQNDLEALPESIVQCRSLQQLDVSENKLMVL 236

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD IGDL  L  L +  N +  LP ++  L +L  L +  N ++ L  ++GS  +L +L 
Sbjct: 237 PDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAILKVDRNAITQLTPAVGSCTALSELY 296

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L E+P ++G   +LR L +D N+LK +P  +G   +L VLS+R N ++QLP  + 
Sbjct: 297 LTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPSTIGGCISLSVLSLRDNLLEQLPLEIG 356

Query: 275 SLSSLRELDVSFNELESVP 293
            L +LR LDV  N L  +P
Sbjct: 357 RLENLRVLDVCNNRLNFLP 375



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 137/258 (53%), Gaps = 3/258 (1%)

Query: 121 LDLSENRIVAVPATIG-GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           LD  +  + +VP  I     +L++  L  N I +L   +     L  L L  N+I  +P 
Sbjct: 18  LDRRQCNLQSVPNDIDRNARTLEEAYLDCNHIKDLEKPLFRCRKLKTLSLSENEIIRVPT 77

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            ++ L+ LEEL+L  N++S LP+ I     LK L + +N +  LP TI   +S+  L ++
Sbjct: 78  DIANLICLEELNLKGNDVSDLPEEIKECTQLKILDLSSNPITRLPPTITLLTSMTHLGLN 137

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
              L  +P  +G +  L  L VR N ++ +P ++S L+ L+ LD+  NEL+ +P  +   
Sbjct: 138 DISLTQMPLDIGHLRNLRSLEVRENLLRTIPPSISQLTQLQRLDLGHNELDDLPSEIGLL 197

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L ++ +  N  DL ALP SI     L++LD+S N++ VLPD    L +L  L V  N 
Sbjct: 198 SNLQELYVDQN--DLEALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNC 255

Query: 360 LEVPPRNIVEMGAQAVVQ 377
           L+V P ++  +   A+++
Sbjct: 256 LQVLPTSVGHLKKLAILK 273



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 134/266 (50%), Gaps = 28/266 (10%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L ++  L+  I   P SI +L+ L  LDL  N +  +P+ IG LS+L++L +  N + 
Sbjct: 155 RSLEVRENLLRTI---PPSISQLTQLQRLDLGHNELDDLPSEIGLLSNLQELYVDQNDLE 211

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+SI    SL  LD+  N++  LP  +  L +L +L +  N L  LP S+G L  L  
Sbjct: 212 ALPESIVQCRSLQQLDVSENKLMVLPDDIGDLEQLNDLTVSHNCLQVLPTSVGHLKKLAI 271

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L V+ N + +L   +G C++L EL +  N L  +P ++G +  L  L++  N +K++P+T
Sbjct: 272 LKVDRNAITQLTPAVGSCTALSELYLTENLLTEVPTSLGNLKALRTLNLDKNQLKEIPST 331

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +    SL  L +  N LE                          LP  IG LE L  LD+
Sbjct: 332 IGGCISLSVLSLRDNLLEQ-------------------------LPLEIGRLENLRVLDV 366

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQEN 358
            NN++  LP +  +L  L+ L + E+
Sbjct: 367 CNNRLNFLPFTINVLFNLQALWLSES 392


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 160/316 (50%), Gaps = 30/316 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ +P  I     LV LD+S N I+ +P +I   S+L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +LV L+LR N ++ LP +LS L RLEELDLG+N 
Sbjct: 126 KLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L SLP+SIG L+ LK L ++ N L E+P  +G   +L  L V  N+++ LPE +G + +L
Sbjct: 186 LYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N I  LP ++  L  L  L    N L  +PES+    +L ++ +  N   +++
Sbjct: 246 ADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTEN--KIQS 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LPRSIG L+ L   +   NQ+  LP        L V  V+EN L   P  +    +QA  
Sbjct: 304 LPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSEL----SQATE 359

Query: 377 QYMADLVEKRDAKTQP 392
            ++ D+   R     P
Sbjct: 360 LHVLDVSGNRKVHCCP 375



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 139/269 (51%), Gaps = 6/269 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP     L  L  L LS+N I  +P  I     L +LD+  N I+E+P+SI
Sbjct: 46  NQLRD----LPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESI 101

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
               +L   D  GN ++ LP +  +L  L  L +   +L  LP++IG+L +L  L +  N
Sbjct: 102 SFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELREN 161

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP ++     L EL +  N L +LPE++G +  L+ L +  N + ++P  M S+ +
Sbjct: 162 LLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKN 221

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  LDVS N++E +PE L    +L  + +  N  D  ALP SIG L  L  L    N++ 
Sbjct: 222 LLCLDVSENKIERLPEELGGLLSLADLLVSQNLID--ALPESIGKLRKLSILKADQNRLT 279

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LP+S      L  L + EN ++  PR+I
Sbjct: 280 YLPESIGNCESLTELVLTENKIQSLPRSI 308



 Score = 61.6 bits (148), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 56/103 (54%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L++     + + +LP+SIG   SL  L L+EN+I ++P +IG L  L   +   N++ 
Sbjct: 266 RKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQSLPRSIGKLKQLFNFNCDRNQLT 325

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
            LP  IG   SL    +R N+++ +P  LS+   L  LD+  N
Sbjct: 326 SLPKEIGGCQSLNVFCVRENRLTRIPSELSQATELHVLDVSGN 368



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 54/106 (50%), Gaps = 3/106 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +EV+  R+ ++  +P  +     SL EL +  N+L  +P+       L K+ + +N  ++
Sbjct: 14  VEVIDKRHCSLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + +P  I N   L ELD+S N I  +P+S    S L+V     NPL
Sbjct: 72  QRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPL 117


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/269 (36%), Positives = 151/269 (56%), Gaps = 10/269 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL N  + N   LP  IG+L SL +L LS NR+   P  IG L +L+KL
Sbjct: 89  EIGQLQNLQELNLWNNQLKN---LPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L SL  L+L  N++ ALP  + +L  L+EL L +N L+ LP+ I
Sbjct: 146 NLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ LI+  N L  LP  IGQ  +L+ L    N L  LP+ +G++  L+ L + +N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+EL ++ N+L ++P+ +     L      NN   L  LP  IG L
Sbjct: 266 QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN--QLTMLPNEIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           + L+ L ++NNQ+     SF+   R+R L
Sbjct: 324 QNLQWLKLNNNQL-----SFQEEERIRKL 347



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/263 (35%), Positives = 148/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL+ N+   +P  IG L +L++L+L  N++  LP  IG L SL  L
Sbjct: 63  LPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQTL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++  P  + +L  L++L+L  N L++L   IG L SL+KL ++ N L+ LP+ I
Sbjct: 123 ILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LPE +G++  L+ L +  N +  LP  +  L +L+ L    N
Sbjct: 183 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P+ +     L  + + +N   L  LP+ IG LE L+EL +++NQ+  LP     L
Sbjct: 243 ELTILPQEIGQLQKLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+      N L + P  I ++
Sbjct: 301 KNLQTFISFNNQLTMLPNEIGQL 323



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/227 (31%), Positives = 125/227 (55%), Gaps = 5/227 (2%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IGQ  SL+ L +  NRL   P+ +G++  L+ L++ YN +  L   
Sbjct: 99  LNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L SL++L++  N L+++P  +     L ++ + NN   L  LP  IG L+ L+ L +
Sbjct: 159 IGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN--QLTILPEEIGQLKNLQALIL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +NQ+ +LP     L  L++L    N L + P+   E+G    +QY+
Sbjct: 217 GDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ---EIGQLQKLQYL 260


>gi|391343057|ref|XP_003745831.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Metaseiulus
           occidentalis]
          Length = 516

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 170/349 (48%), Gaps = 74/349 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L  LV+LD S N ++ +P  IG   +L  LD+  N +I++P+++G+L 
Sbjct: 161 NKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLK 220

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI------------------ 204
           SLV L LR NQ++++P + +    ++E ++ SNN+S+LPD +                  
Sbjct: 221 SLVRLGLRYNQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQFT 280

Query: 205 -------GSLIS------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                  G   S                        L KL ++ N L  LP  IG  +++
Sbjct: 281 SYPVGGPGQFTSVHSINFEHNHISKIPFGMFSRAKNLSKLNMKDNQLSALPLDIGTWTNM 340

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+L  +P+ +  +H+LEVL +  N +++LP ++  LS LR LD+  N+LE +P
Sbjct: 341 VELNLATNQLVKIPDDIQYLHSLEVLVLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLP 400

Query: 294 ESLCFA-----------------------TTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             + F                        T+L  +N+G N  +++ +P  IG +E LE L
Sbjct: 401 NEIGFLHDLQKLMVQNNLLQTLPRAIGHLTSLTYLNVGEN--NVQHIPEEIGTMEALESL 458

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +++N +  LP    + S L+++ ++  PL   P  IV  G   V+QY+
Sbjct: 459 YLNDNPLHALPFELALCSNLQIMSIENCPLSQMPAEIVIGGPSLVIQYL 507



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/240 (33%), Positives = 132/240 (55%), Gaps = 6/240 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS + I A+PA +  L+ L +L L+ N++  LP+ IG L++L  L L  N ++ LP +
Sbjct: 41  LDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPDS 100

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L+ L +L  LDL  N  + +P  I +L SL  L +  N + E+ + I Q S+L  L +  
Sbjct: 101 LTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRE 160

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+++ LP  +G +  L  L    N++  LP  +    +L  LDV  NEL  VPE+L    
Sbjct: 161 NKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLK 220

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD----SFRMLSRLRVLRVQ 356
           +LV++  G  +  L ++P+S     +++E ++ +N I  LPD    SF  ++ L + R Q
Sbjct: 221 SLVRL--GLRYNQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQMTSLTLSRNQ 278



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/337 (29%), Positives = 149/337 (44%), Gaps = 74/337 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ IG L +L +L LSEN +  +P ++  L  L+ LDL  N+  E+P  I  L 
Sbjct: 69  NKLSTLPNEIGGLVNLATLALSENSLTHLPDSLTNLKQLRVLDLRHNKFTEIPPVIYTLR 128

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I  +   +++L  L  L L  N +  LP  IG L  L  L    N +  
Sbjct: 129 SLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRMLPAGIGLLEQLVTLDASNNHMLH 188

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+C +L  L V +N L  +PE +G + +L  L +RYN +  +P + ++ + ++E 
Sbjct: 189 LPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLGLRYNQLTSVPKSFAACALMQEF 248

Query: 283 DVSFNELESVPESLCFATT----------------------------------------- 301
           +V  N + ++P+ L  + T                                         
Sbjct: 249 NVESNNISALPDGLLSSFTQMTSLTLSRNQFTSYPVGGPGQFTSVHSINFEHNHISKIPF 308

Query: 302 --------LVKMNIGNNFADLRALPRSIGN-----------------------LEMLEEL 330
                   L K+N+ +N   L ALP  IG                        L  LE L
Sbjct: 309 GMFSRAKNLSKLNMKDN--QLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEVL 366

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +SNN +R LP S   LS+LRVL ++EN LE  P  I
Sbjct: 367 VLSNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEI 403



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 120/239 (50%), Gaps = 3/239 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           NI  LP ++  L+ LV L L  N++  +P  IGGL +L  L L  N +  LPDS+ +L  
Sbjct: 47  NITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPDSLTNLKQ 106

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  LDLR N+ + +P  +  L  L  L L  N +  + + I  L +L  L +  N +  L
Sbjct: 107 LRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLRENKIRML 166

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG    L  L    N +  LP  +GK   L  L V++N +  +P T+ +L SL  L 
Sbjct: 167 PAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHNELIDVPETLGNLKSLVRLG 226

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLP 341
           + +N+L SVP+S      + + N+ +N  ++ ALP   + +   +  L +S NQ    P
Sbjct: 227 LRYNQLTSVPKSFAACALMQEFNVESN--NISALPDGLLSSFTQMTSLTLSRNQFTSYP 283



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 121/231 (52%), Gaps = 2/231 (0%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL  + I  LP ++ DL  LV L L GN++S LP  +  LV L  L L  N+L+ LPD
Sbjct: 40  RLDLSRSNITALPANVKDLTHLVELYLYGNKLSTLPNEIGGLVNLATLALSENSLTHLPD 99

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+ +L  L+ L +  N   E+P  I    SL  L + +NR++ +   + ++  L +LS+R
Sbjct: 100 SLTNLKQLRVLDLRHNKFTEIPPVIYTLRSLTTLFLRFNRIREVSNEIAQLSNLTMLSLR 159

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N I+ LP  +  L  L  LD S N +  +P  +     L  +++ +N  +L  +P ++G
Sbjct: 160 ENKIRMLPAGIGLLEQLVTLDASNNHMLHLPPEIGKCKNLSTLDVQHN--ELIDVPETLG 217

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           NL+ L  L +  NQ+  +P SF   + ++   V+ N +   P  ++    Q
Sbjct: 218 NLKSLVRLGLRYNQLTSVPKSFAACALMQEFNVESNNISALPDGLLSSFTQ 268



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 101/185 (54%), Gaps = 3/185 (1%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  K    LN+++   + +  LP  IG  +++V L+L+ N++V +P  I  L SL+ L L
Sbjct: 312 SRAKNLSKLNMKD---NQLSALPLDIGTWTNMVELNLATNQLVKIPDDIQYLHSLEVLVL 368

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  LDL  N++  LP  +  L  L++L + +N L +LP +IG 
Sbjct: 369 SNNILRRLPGSIGGLSKLRVLDLEENKLEQLPNEIGFLHDLQKLMVQNNLLQTLPRAIGH 428

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L SL  L V  N+++ +P  IG   +L  L ++ N L ALP  +     L+++S+    +
Sbjct: 429 LTSLTYLNVGENNVQHIPEEIGTMEALESLYLNDNPLHALPFELALCSNLQIMSIENCPL 488

Query: 267 KQLPT 271
            Q+P 
Sbjct: 489 SQMPA 493


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 153/278 (55%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 121 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 177

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 178 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 237

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 238 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 297

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L ++PE +     L K+++  N   L  LP+ IG
Sbjct: 298 YNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTLPKEIG 355

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 356 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 393



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 80  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 139

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 140 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 199

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 200 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 259

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 260 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 319

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 320 YQN--RLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 377

Query: 368 VEM 370
            ++
Sbjct: 378 KQL 380



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 69  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 128

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 129 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 188

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 189 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 248

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 249 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 306

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++  LP+    L  L+ L +  N L   P+ I
Sbjct: 307 EITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEI 354



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 62  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 121

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 122 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 181

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 182 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 241

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 242 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 299

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 300 RFEAFPKEITQFQNLQVL----DLYQNR 323



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 125/224 (55%)

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           H      L +++ +   +  LDL  +++  LP  + +L  L+ L+  +N L++LP  IG 
Sbjct: 42  HKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGK 101

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L +L++L ++ N L  LP  IGQ  +L+ L ++ N+L  LPE +GK+  L+ L++  N +
Sbjct: 102 LQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRL 161

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LP  +  L +L+EL +S N L  +PE +    +L K+++G        LP+ I  L+ 
Sbjct: 162 NILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQN 221

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+EL +  N++ VLP     L  LR+L + +N L + P+ I ++
Sbjct: 222 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQL 265


>gi|424841226|ref|ZP_18265851.1| Leucine Rich Repeat (LRR)-containing protein [Saprospira grandis
           DSM 2844]
 gi|395319424|gb|EJF52345.1| Leucine Rich Repeat (LRR)-containing protein [Saprospira grandis
           DSM 2844]
          Length = 370

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/254 (38%), Positives = 151/254 (59%), Gaps = 5/254 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ +G+L  L  L +  +R   +P +IG L  L++L +  + + ELP+ IG L SL  L
Sbjct: 104 IPEVLGRLRQLKKLSIFHSRAKRLPLSIGQLHQLEELSIQMSLLEELPEEIGQLKSLRCL 163

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L   ++  LP ++ +L +LEEL + ++ L  LP+ IG L SL+KL+VE + LE+LP +I
Sbjct: 164 HLGQLELLYLPKSIGQLRQLEELQIVASPLMYLPEEIGQLSSLRKLVVEHSQLEQLPKSI 223

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G C  L+EL +  N+L+ LP  +  +  L  L +  N +K+LP T++ L  L+ L +  N
Sbjct: 224 GHCCQLQELSLRNNKLERLPSRIASLQRLRHLDLSQNRLKRLPFTLARLPLLQLLQLDDN 283

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           ELE +P ++     L +++I GNN A    LP +IG L+ L+ + + NNQ+  LP S   
Sbjct: 284 ELEKLP-TIKNWGQLSELSIRGNNLAK---LPATIGLLQQLKTVRVENNQLSALPISIMD 339

Query: 347 LSRLRVLRVQENPL 360
           L  LR L  QENPL
Sbjct: 340 LQELRSLNYQENPL 353



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 155/276 (56%), Gaps = 3/276 (1%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I +L SL  L + +  +  +P  +G L  LKKL +  +R   LP SIG L  L  L ++ 
Sbjct: 85  IQQLFSLEHLFIRQRSLYQIPEVLGRLRQLKKLSIFHSRAKRLPLSIGQLHQLEELSIQM 144

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           + +  LP  + +L  L  L LG   L  LP SIG L  L++L +  + L  LP  IGQ S
Sbjct: 145 SLLEELPEEIGQLKSLRCLHLGQLELLYLPKSIGQLRQLEELQIVASPLMYLPEEIGQLS 204

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SLR+L V++++L+ LP+++G    L+ LS+R N +++LP+ ++SL  LR LD+S N L+ 
Sbjct: 205 SLRKLVVEHSQLEQLPKSIGHCCQLQELSLRNNKLERLPSRIASLQRLRHLDLSQNRLKR 264

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P +L     L  + + +N  +L  LP +I N   L EL I  N +  LP +  +L +L+
Sbjct: 265 LPFTLARLPLLQLLQLDDN--ELEKLP-TIKNWGQLSELSIRGNNLAKLPATIGLLQQLK 321

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
            +RV+ N L   P +I+++     + Y  + + ++D
Sbjct: 322 TVRVENNQLSALPISIMDLQELRSLNYQENPLRQKD 357



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 117/209 (55%), Gaps = 1/209 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M  +E LP+ IG+L SL  L L +  ++ +P +IG L  L++L + A+ ++ LP+ IG L
Sbjct: 144 MSLLEELPEEIGQLKSLRCLHLGQLELLYLPKSIGQLRQLEELQIVASPLMYLPEEIGQL 203

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L +  +Q+  LP ++    +L+EL L +N L  LP  I SL  L+ L +  N L+
Sbjct: 204 SSLRKLVVEHSQLEQLPKSIGHCCQLQELSLRNNKLERLPSRIASLQRLRHLDLSQNRLK 263

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP T+ +   L+ L++D N L+ LP  +     L  LS+R NN+ +LP T+  L  L+ 
Sbjct: 264 RLPFTLARLPLLQLLQLDDNELEKLP-TIKNWGQLSELSIRGNNLAKLPATIGLLQQLKT 322

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN 310
           + V  N+L ++P S+     L  +N   N
Sbjct: 323 VRVENNQLSALPISIMDLQELRSLNYQEN 351


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  145 bits (367), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 153/278 (55%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 113 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 169

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 170 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 229

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 230 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 289

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L ++PE +     L K+++  N   L  LP+ IG
Sbjct: 290 YNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTLPKEIG 347

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 348 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 385



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 132 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 191

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 192 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 251

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 252 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 311

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 312 YQN--RLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369

Query: 368 VEM 370
            ++
Sbjct: 370 KQL 372



 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 61  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 120

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 121 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 180

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 181 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 240

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 241 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 298

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++  LP+    L  L+ L +  N L   P+ I
Sbjct: 299 EITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEI 346



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 54  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 113

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 114 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 173

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 174 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 233

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 234 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 291

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 292 RFEAFPKEITQFQNLQVL----DLYQNR 315



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 125/224 (55%)

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           H      L +++ +   +  LDL  +++  LP  + +L  L+ L+  +N L++LP  IG 
Sbjct: 34  HKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGK 93

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L +L++L ++ N L  LP  IGQ  +L+ L ++ N+L  LPE +GK+  L+ L++  N +
Sbjct: 94  LQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRL 153

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LP  +  L +L+EL +S N L  +PE +    +L K+++G        LP+ I  L+ 
Sbjct: 154 NILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQN 213

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+EL +  N++ VLP     L  LR+L + +N L + P+ I ++
Sbjct: 214 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQL 257


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 159/272 (58%), Gaps = 2/272 (0%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +++N+ N   + I  +PDS+  L  L  L +  N + A+P  IG L S+K L L+ N I 
Sbjct: 191 KNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIE 250

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ++PDS+  L  L  L++R N ++A+P  +++L  ++ LDL SNN++ +PDS+ +L  L +
Sbjct: 251 KIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTE 310

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + ++ L  +P  I +  S++ L + +++   +P+++  +  L  L++ YN +  +P  
Sbjct: 311 LYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDE 370

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           ++ L SL+ L+++ N +  +P+SLC    L ++N+ +N   L A+P  I  L+ ++ L++
Sbjct: 371 ITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNA--LTAIPDEISKLKSMKTLNL 428

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           S N+I  +PDS   L +L  L +  N L   P
Sbjct: 429 SFNKIAKIPDSLCALEQLTELDMMSNALTSIP 460



 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 156/288 (54%), Gaps = 25/288 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+   L  L LS N+I  +P ++  L  L +L +  N +  +PD IG L ++  L
Sbjct: 137 VPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLKNMNIL 196

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+I+ +P +L  L +L EL +  N L+++PD IG L S+K L +  N++E++P ++
Sbjct: 197 NLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSL 256

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE------ 281
                L EL V YN L A+P+ + K+ ++++L +  NNI ++P ++ +L  L E      
Sbjct: 257 CALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSD 316

Query: 282 -----------------LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
                            LD+SF++   +P+SLC    L K+N+  ++  L A+P  I  L
Sbjct: 317 ALTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNM--HYNALTAIPDEITKL 374

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           + L+ L++++N I  +PDS   L +L  L +  N L   P  I ++ +
Sbjct: 375 KSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLKS 422



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 77/247 (31%), Positives = 142/247 (57%), Gaps = 2/247 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N +  VP  IG    L+KL L +N+I ++PDS+  L  L  L +  N ++A+P  + +L 
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLK 191

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            +  L+L  N ++ +PDS+ +L  L +L +E N L  +P  IG+  S++ L+++ N ++ 
Sbjct: 192 NMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEK 251

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +P+++  +  L  L+VRYN +  +P  ++ L S++ LD+S N +  +P+SLC    L ++
Sbjct: 252 IPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTEL 311

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            +G++   L A+P  I  L+ ++ LD+S ++   +PDS   L +L  L +  N L   P 
Sbjct: 312 YMGSDA--LTAIPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPD 369

Query: 366 NIVEMGA 372
            I ++ +
Sbjct: 370 EITKLKS 376



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 25/228 (10%)

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N +  +P  IG+   L  L L  N+I+ +P +L  L +L EL +G N L+++PD IG L 
Sbjct: 132 NGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEIGKLK 191

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           ++  L +  N + ++P ++     L EL ++YN L A+P+ +GK+ ++++L +  NNI  
Sbjct: 192 NMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNI-- 249

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
                                E +P+SLC    L ++N+  N   L A+P  I  L+ ++
Sbjct: 250 ---------------------EKIPDSLCALEQLTELNVRYNA--LTAIPDEITKLKSMK 286

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
            LD+S+N I  +PDS   L +L  L +  + L   P  I ++ +  ++
Sbjct: 287 ILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKIL 334



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 112/209 (53%), Gaps = 26/209 (12%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E++  K  + L+L +   +NI  +PDS+  L  L  L +  + + A+P  I  L S+K L
Sbjct: 278 EITKLKSMKILDLSS---NNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKIL 334

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  ++  ++PDS+  L  L  L++  N ++A+P  +++L  L+ L+L  NN++ +PDS+
Sbjct: 335 DLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIPDSL 394

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +L                         L EL +  N L A+P+ + K+ +++ L++ +N
Sbjct: 395 CAL-----------------------EQLTELNMVSNALTAIPDEISKLKSMKTLNLSFN 431

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVP 293
            I ++P ++ +L  L ELD+  N L S+P
Sbjct: 432 KIAKIPDSLCALEQLTELDMMSNALTSIP 460


>gi|158286480|ref|XP_308777.4| AGAP006993-PA [Anopheles gambiae str. PEST]
 gi|157020488|gb|EAA04662.4| AGAP006993-PA [Anopheles gambiae str. PEST]
          Length = 626

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/292 (31%), Positives = 163/292 (55%), Gaps = 8/292 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           + ++I  L  L  L+L +N + ++PA IG L+ L K  +  N++ ELP+S   L  L +L
Sbjct: 107 ISENIQNLVDLTVLNLQDNALTSLPAGIGALTKLTKFSVARNKLTELPESFFQLKELKHL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+ + +   +S L+ LE LD+  N++++LP  +G L+ L++L +  N L ELP+ I
Sbjct: 167 NLSHNEFAEMNPNISDLIMLETLDVSFNSINALPGGVGFLVRLQQLTLSNNHLTELPNDI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L++L +  N LK LP  +G++  LE   V++N+I +LP   +   +L+EL +S N
Sbjct: 227 VNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELP-DFTGCEALKELHISNN 285

Query: 288 ELESVPESLCFATTLVK-MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            ++++P   C     +K +++ +N   +  LP  I  L  L  LD+SNN I  LP     
Sbjct: 286 YIKTLPGDFCENLPQLKVLDLRDN--KIEKLPDEIALLASLTRLDLSNNTISSLPSCLST 343

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS 398
           L+ L  L+V+ NP+    R+I++ G Q +++ +     +RD   +P   +K 
Sbjct: 344 LAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTL----RERDGTGKPDGGQKG 391



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 143/343 (41%), Gaps = 59/343 (17%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG--- 159
           +++  LP+ I  L  L  LDL++N +  +P  +G L  L+   +  N I ELPD  G   
Sbjct: 217 NHLTELPNDIVNLRKLQKLDLAKNDLKKLPPVMGELRRLECFYVQHNDIDELPDFTGCEA 276

Query: 160 --------------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                               +L  L  LDLR N+I  LP  ++ L  L  LDL +N +SS
Sbjct: 277 LKELHISNNYIKTLPGDFCENLPQLKVLDLRDNKIEKLPDEIALLASLTRLDLSNNTISS 336

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR-LKALPEAVGKIHTLEV 258
           LP  + +L  L  L VE N +  +   I QC + R L+    R     P+   K      
Sbjct: 337 LPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGTGKPDGGQKGVARAA 396

Query: 259 LSVRYNNIKQLPTTMSSLSSLREL--------------------------------DVSF 286
            S     +K    T S+   + ++                                D+S 
Sbjct: 397 ASASTAVVKNSLFTESTFPDVYQMRKGRALIVCSKALVDIPEAVFLDALEACVYNVDISK 456

Query: 287 NELESVPESLC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           N+L +VP  +   ++ L ++N+  N   L+ +P      + +  L++SNNQ+  LP+   
Sbjct: 457 NKLTAVPSGITHLSSLLTELNVSFNL--LQTVPAFFSQFDKISYLNLSNNQMTDLPEVVG 514

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           +L  LR L V  N L+  P  + E+    ++    + +E+ DA
Sbjct: 515 LLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDA 557



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/171 (28%), Positives = 85/171 (49%), Gaps = 2/171 (1%)

Query: 215 VETNDLEELPHTIGQCSSL-RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           +  N L  +P  I   SSL  EL V +N L+ +P    +   +  L++  N +  LP  +
Sbjct: 454 ISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQMTDLPEVV 513

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTL-VKMNIGNNFADLRALPRSIGNLEMLEELDI 332
             L +LREL+V  N+L+ +P+ +     L + +  GN   ++ A    +G L+ L  LD+
Sbjct: 514 GLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALKRLATLDL 573

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           +NN I+ +P     L  +  L +  N    P   I+E G ++++ Y+ D +
Sbjct: 574 ANNNIKHVPPVLGTLKNITTLELIGNSFRQPRHQILEKGTESIMSYLRDRI 624



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/157 (30%), Positives = 85/157 (54%), Gaps = 4/157 (2%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           + + ++D+S+N++ AVP+ I  LSSL  +L++  N +  +P        + YL+L  NQ+
Sbjct: 447 ACVYNVDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQFDKISYLNLSNNQM 506

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT---IGQCS 231
           + LP  +  LV L EL++ SN L  +PD +  L  L+ L+   N +EE+  T   +G   
Sbjct: 507 TDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQIEEIDATESGLGALK 566

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L  L +  N +K +P  +G +  +  L +  N+ +Q
Sbjct: 567 RLATLDLANNNIKHVPPVLGTLKNITTLELIGNSFRQ 603



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/173 (28%), Positives = 94/173 (54%), Gaps = 8/173 (4%)

Query: 151 IIELPDSI--GDLLSLVY-LDLRGNQISALPVALSRLVRL-EELDLGSNNLSSLPDSIGS 206
           ++++P+++    L + VY +D+  N+++A+P  ++ L  L  EL++  N L ++P     
Sbjct: 433 LVDIPEAVFLDALEACVYNVDISKNKLTAVPSGITHLSSLLTELNVSFNLLQTVPAFFSQ 492

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
              +  L +  N + +LP  +G   +LREL V  N+LK +P+ V ++  LE+L    N I
Sbjct: 493 FDKISYLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGLEILLASGNQI 552

Query: 267 KQLPTTMSSLSSLRE---LDVSFNELESVPESLCFATTLVKMN-IGNNFADLR 315
           +++  T S L +L+    LD++ N ++ VP  L     +  +  IGN+F   R
Sbjct: 553 EEIDATESGLGALKRLATLDLANNNIKHVPPVLGTLKNITTLELIGNSFRQPR 605



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 67/126 (53%), Gaps = 3/126 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ +P    +   +  L+LS N++  +P  +G L +L++L++ +N++  +PD + +L  L
Sbjct: 483 LQTVPAFFSQFDKISYLNLSNNQMTDLPEVVGLLVTLRELNVISNQLKRIPDCVYELRGL 542

Query: 165 VYLDLRGNQ---ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L   GNQ   I A    L  L RL  LDL +NN+  +P  +G+L ++  L +  N   
Sbjct: 543 EILLASGNQIEEIDATESGLGALKRLATLDLANNNIKHVPPVLGTLKNITTLELIGNSFR 602

Query: 222 ELPHTI 227
           +  H I
Sbjct: 603 QPRHQI 608


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 133/252 (52%), Gaps = 25/252 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL  L  L L  NR+  +P  IG L +L+ L+L  NR+I LP  IG L  L +L
Sbjct: 18  LPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWL 77

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L RLE L L +N L  LP  IG L +LK+LI+E N LE  P  I
Sbjct: 78  YLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLESFPKEI 137

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ L +  N+L  LP+ +G+                       L +L++LD+S N
Sbjct: 138 GTLQKLQHLYLANNQLATLPKEIGQ-----------------------LQNLKDLDLSDN 174

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +++ NN   L  LP+ IG LE LE+L++S N     P     L
Sbjct: 175 QLVTLPEEIGTLQRLEWLSLKNN--QLATLPKEIGKLEKLEDLNLSGNPFTTFPQEIVGL 232

Query: 348 SRLRVLRVQENP 359
             L+ L +Q  P
Sbjct: 233 KHLKTLVLQNIP 244



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 125/229 (54%), Gaps = 2/229 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK L L  N++  LP+ IG L  L YL L  N+++ LP  +  L  L+ L+L +N L +
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG+L  L+ L +  N L  LP  IG+   L  L ++ N+L+ LP+ +GK+  L+ L
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKEL 123

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N ++  P  + +L  L+ L ++ N+L ++P+ +     L  +++ +N   L  LP 
Sbjct: 124 ILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDN--QLVTLPE 181

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            IG L+ LE L + NNQ+  LP     L +L  L +  NP    P+ IV
Sbjct: 182 EIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQEIV 230



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 87/157 (55%), Gaps = 8/157 (5%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L L+N   + +E  P  IG L  L  L L+ N++  +P  IG L +LK L
Sbjct: 113 EIGKLQNLKELILEN---NRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDL 169

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+++ LP+ IG L  L +L L+ NQ++ LP  + +L +LE+L+L  N  ++ P  I
Sbjct: 170 DLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNPFTTFPQEI 229

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
             L  LK L+     L+ +P  + +   +R+L  D N
Sbjct: 230 VGLKHLKTLV-----LQNIPALLSEKEKIRKLLPDVN 261



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/162 (32%), Positives = 88/162 (54%), Gaps = 2/162 (1%)

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +LK L +  N L  LP+ IG+   L  LR++ NRL  LPE +G +  L+ L++  N +  
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP  + +L  L  L ++ N+L ++P+ +     L  + + NN   LR LP+ IG L+ L+
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENN--QLRILPQEIGKLQNLK 121

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           EL + NN++   P     L +L+ L +  N L   P+ I ++
Sbjct: 122 ELILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQL 163


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 141/260 (54%), Gaps = 2/260 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I ++   IG+L +L  LDL  N + A+P  IG L +L+ LDL  N++  LP  I +L +L
Sbjct: 56  IRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNL 115

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +LDL  N++ ALP  +  L  L+ LDLG N   S P  I  L +L++LI+  N     P
Sbjct: 116 QHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFP 175

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I +   L+ L +  N+LK LP+ +G++  L  L +  N ++  PT ++ L  L+ LD+
Sbjct: 176 IEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDL 235

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
            +NE ES P  +     L  + + +N   L+ LP  IG LE L EL++  N++  LP   
Sbjct: 236 GYNEFESFPTVIVKLKNLQYLFLNDN--KLKLLPDEIGELENLRELNLRGNKLETLPPVI 293

Query: 345 RMLSRLRVLRVQENPLEVPP 364
             L  L VL + +N LE  P
Sbjct: 294 GELENLYVLELYKNNLESLP 313



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/288 (32%), Positives = 154/288 (53%), Gaps = 5/288 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+L+N   + +E LP  I +L +L  LDL +N++ A+P  +  L +L+ L
Sbjct: 85  EIGELKNLQHLDLRN---NKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHL 141

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  I  L +L  L L  N+    P+ ++ L +L+ L L  N L  LPD I
Sbjct: 142 DLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEI 201

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G +  L++L ++ N+LE  P  I +   L+ L + YN  ++ P  + K+  L+ L +  N
Sbjct: 202 GEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDN 261

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K LP  +  L +LREL++  N+LE++P  +     L  + +  N  +L +LP  IG L
Sbjct: 262 KLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLELYKN--NLESLPDVIGKL 319

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           + L  L++ NN+I  LP +   L  LR L + +N LE  P  I ++  
Sbjct: 320 KNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKLSG 367



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 144/268 (53%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LP  IG+L +L  LDL  N++ ++P  I  L +L+ LDL  N++  LP  + +L 
Sbjct: 77  NNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELK 136

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L +LDL  NQ  + P  + +L  LE L L +N     P  I  L  L+ L +  N L+ 
Sbjct: 137 NLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKL 196

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+   LREL +D N L++ P  + ++  L+ L + YN  +  PT +  L +L+ L
Sbjct: 197 LPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYL 256

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+L+ +P+ +     L ++N+  N   L  LP  IG LE L  L++  N +  LPD
Sbjct: 257 FLNDNKLKLLPDEIGELENLRELNLRGN--KLETLPPVIGELENLYVLELYKNNLESLPD 314

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L +L +  N +E  P  I E+
Sbjct: 315 VIGKLKNLGMLNLGNNKIETLPAAIGEL 342



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 94/284 (33%), Positives = 141/284 (49%), Gaps = 30/284 (10%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL +L  EV   K  + L+L     +  E  P  I KL +L  L L+ N+    P  I  
Sbjct: 124 KLKALPYEVEELKNLQHLDLG---YNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAE 180

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L  L+ L L  N++  LPD IG++  L  L L  N++ + P  ++ L +L+ LDLG N  
Sbjct: 181 LKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEF 240

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
            S P  I  L +L+ L +  N L+ LP  IG+  +LREL +  N+L+ LP  +G++  L 
Sbjct: 241 ESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKLETLPPVIGELENLY 300

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL +  NN++ LP  +  L +L  L                       N+GNN   +  L
Sbjct: 301 VLELYKNNLESLPDVIGKLKNLGML-----------------------NLGNN--KIETL 335

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLS-RLRVLRVQENPL 360
           P +IG L+ L EL +S+N++  LP     LS  LR+L +  N +
Sbjct: 336 PAAIGELQNLRELYLSDNKLETLPVEIEKLSGSLRLLNLMGNNM 379


>gi|169260659|gb|ACA52056.1| densin 11-21 [Rattus norvegicus]
          Length = 495

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 150/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + RLRVL + +N L+  P +  ++   A + +++D
Sbjct: 370 GQMQRLRVLNLSDNRLKNLPFSFTKLKELAAL-WLSD 405



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 3/202 (1%)

Query: 167 LDLRGNQISALPVALSRLVR-LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           LD     +  +P  +    R LEEL L +N +  LP  + +  +L+KL +  NDL  LP 
Sbjct: 32  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 91

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +I    +L+EL +  N ++  PE +     L ++    N I +LP   + L +L +L ++
Sbjct: 92  SIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLN 151

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
              LE +P +      L  + +  N   L+ LP+S+  L  LE LD+ NN+   LP+   
Sbjct: 152 DAFLEFLPANFGRLVKLRILELRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            +  LR L +  N L+V P +I
Sbjct: 210 QIQNLRELWMDNNALQVLPGSI 231


>gi|74200782|dbj|BAE24769.1| unnamed protein product [Mus musculus]
          Length = 469

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 150/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + RLRVL + +N L+  P +  ++   A + +++D
Sbjct: 370 GQMQRLRVLNLSDNRLKNLPFSFTKLKELAAL-WLSD 405



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/222 (28%), Positives = 107/222 (48%), Gaps = 3/222 (1%)

Query: 167 LDLRGNQISALPVALSRLVR-LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           LD     +  +P  +    R LEEL L +N +  LP  + +  +L+KL +  NDL  LP 
Sbjct: 32  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 91

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +I    +L+EL +  N ++  PE +     L ++    N I +LP   + L +L +L ++
Sbjct: 92  SIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLN 151

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
              LE +P +      L  + +  N   L+ LP+S+  L  LE LD+ NN+   LP+   
Sbjct: 152 DAFLEFLPANFGRLVKLRILELRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
            +  LR L +  N L+V P +I ++     +    + +E  D
Sbjct: 210 QIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/256 (39%), Positives = 148/256 (57%), Gaps = 3/256 (1%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA-LSRLVR 186
           +  +P  +  L  ++ L+L  NRI ++P+ I ++ +LV LDL  NQI+ LP       + 
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFIN 95

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L ELDL  NNL +LP+S+G L +LKKL +  N L++LP ++G   +L EL +  N+L   
Sbjct: 96  LIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTF 155

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE++G +  L  L +  NN+ +LP  + +   L EL +  N+L  +PESL     L K++
Sbjct: 156 PESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLH 215

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + NN   L  LP+SIGNL  L  LD+S NQ+  LP++   LS L  L +  NPL VPP  
Sbjct: 216 LWNN--QLTYLPKSIGNLSNLTSLDLSYNQLSKLPENIVNLSNLTHLDLSGNPLVVPPPE 273

Query: 367 IVEMGAQAVVQYMADL 382
           +V  G  A+ QY   L
Sbjct: 274 VVSGGVGAIKQYFRQL 289



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 134/227 (59%), Gaps = 4/227 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA-TIGGLSSLKK 143
           EV   K  R LNL     + I  +P+ I  +++LV LDLS N+I  +P    G   +L +
Sbjct: 42  EVFELKQIRVLNLSG---NRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFINLIE 98

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  N +I LP+S+G+L +L  L L  NQ+  LPV+L  L  L ELDL  N L++ P+S
Sbjct: 99  LDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPES 158

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +G+L +L +L +  N+L +LP  +G    L EL +  N+L  LPE++G I  L  L +  
Sbjct: 159 LGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLHLWN 218

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           N +  LP ++ +LS+L  LD+S+N+L  +PE++   + L  +++  N
Sbjct: 219 NQLTYLPKSIGNLSNLTSLDLSYNQLSKLPENIVNLSNLTHLDLSGN 265


>gi|82240198|sp|Q7SXW3.1|LRC40_DANRE RecName: Full=Leucine-rich repeat-containing protein 40
 gi|32766407|gb|AAH55223.1| Leucine rich repeat containing 40 [Danio rerio]
          Length = 601

 Score =  145 bits (366), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 166/284 (58%), Gaps = 4/284 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ +PD +  L +LV LD+ +N++ ++P +IG L  L+KL L  N++ ELP  +  L 
Sbjct: 90  NKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLT 149

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N I  +P  L +LV L+ELDL +N+L  +P+S+ +L +L KL +  N L+ 
Sbjct: 150 NLRCLHLQQNLIEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLKS 209

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +LR L    N+++++P  + ++ +LE L +R+N ++ LP  +    +L+EL
Sbjct: 210 LPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLKEL 268

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E +  E L     L  + + +N   +++LP  I  L+ LE LD++NN I  LP
Sbjct: 269 HCGNNQIEVLEAEHLKHLNALSLLELRDN--KVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
                L +L+ L ++ NPL    R+++  G   +++Y+   V++
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQE 370



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 148/348 (42%), Gaps = 51/348 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           KL  L E+   K  ++L+  N  ++ +E   + +  L++L  L+L +N++ ++P  I  L
Sbjct: 252 KLRYLPELPCCKTLKELHCGNNQIEVLE--AEHLKHLNALSLLELRDNKVKSLPEEITLL 309

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL--------------------- 177
             L++LDL  N I  LP  +G L  L  L L GN + A+                     
Sbjct: 310 QGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQ 369

Query: 178 ---------------------PVALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKKL 213
                                 + +  +  L+ LD      +++PD +   +    +  +
Sbjct: 370 EPPNGGLKEEPKTAMTFPSQAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANV 429

Query: 214 IVETNDLEELPHTIGQC-SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
               N L  +PH I     SL ++ + +N+L  +P     +  L  + +R N +  LP  
Sbjct: 430 NFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPME 489

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-FADLRALPRSIGNLEMLEELD 331
           +  L  LR + +SFN  +S PE L    +L  + I +N    + A+   +  L  L  LD
Sbjct: 490 LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAV--QMKTLSRLSTLD 547

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +SNN I  +P      + LR L +  NP   P   I+  G  AV++Y+
Sbjct: 548 LSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYL 595



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 150/335 (44%), Gaps = 74/335 (22%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L+LQ  L   IE +P  +G+L +L  LDLS N ++ +P ++  L +L KLDL  N++ 
Sbjct: 152 RCLHLQQNL---IEQIPRDLGQLVNLDELDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL---------------------- 190
            LP +I  + +L  LD   NQ+ ++P  L+++  LE+L                      
Sbjct: 209 SLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKEL 268

Query: 191 ------------------------DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
                                   +L  N + SLP+ I  L  L++L +  ND+  LP  
Sbjct: 269 HCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCG 328

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP---------TTMS--- 274
           +G    L+ L ++ N L+A+   +    T E+L    + +++ P         T M+   
Sbjct: 329 LGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFPS 388

Query: 275 -------SLSSLRELDVSFNELESVPESLCFATT---LVKMNIGNNFADLRALPRSIGNL 324
                  ++ +L+ LD S  +  ++P+ +  A     +  +N   N   L A+P  I +L
Sbjct: 389 QAKINVHAIKTLKTLDYSEKQDATIPDDVFDAVDGNPVANVNFSKN--QLTAVPHRIVDL 446

Query: 325 -EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            + L ++++  N++  +P  F  L +L  + ++ N
Sbjct: 447 KDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/173 (26%), Positives = 83/173 (47%), Gaps = 28/173 (16%)

Query: 118 LVSLDLSENRIVAVPATIGGL-SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           + +++ S+N++ AVP  I  L  SL  ++L  N++  +P     L  L+++DLR N + +
Sbjct: 426 VANVNFSKNQLTAVPHRIVDLKDSLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLIS 485

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET------------------- 217
           LP+ L  L++L  + L  N   S P+ +  + SL+ +++ +                   
Sbjct: 486 LPMELEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLST 545

Query: 218 -----NDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTLEVLSVR 262
                ND+ ++P  +G C+SLR L +D N  +    A+   G    LE L  R
Sbjct: 546 LDLSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYLRSR 598


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 102/306 (33%), Positives = 146/306 (47%), Gaps = 47/306 (15%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M+ +  LP  IGKL  + +L +S N I  +P +IG L  L +L  H N+I  LP+SI +L
Sbjct: 296 MNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWEL 355

Query: 162 LSLVY--------------------------LDLRGNQISALPVALSRLVRLEELDLGSN 195
            +L                            L L  N +S LP  +  L  L++L +  N
Sbjct: 356 RNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGN 415

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
              SLP SIG L  L +L    N +  LP +IG    L+ + V  N L ++P  +G +H 
Sbjct: 416 LFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQ 475

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC------------FATTLV 303
           LE L +  NN+  LP ++  L++L  L  S N+L S+P+S+C             + T +
Sbjct: 476 LEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFL 535

Query: 304 KMNIGN---------NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
             NIG          N   L  LP  IGNL  LE+L ++NNQ+  LP+S R L  L  L 
Sbjct: 536 PTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLV 595

Query: 355 VQENPL 360
           V +N L
Sbjct: 596 VSKNAL 601



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/284 (33%), Positives = 154/284 (54%), Gaps = 13/284 (4%)

Query: 78  IKLASLIEVSSKKGT-------RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           I   SL+ VS   GT       +DL L     +++ +LP+ IG L  L  L +S N   +
Sbjct: 363 ISRNSLVTVSINNGTIRNCSQIQDLQLHK---NSLSYLPEDIGSLHGLKKLSVSGNLFKS 419

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P++IG L+ L +L  H N+I  LP+SIG L  L  + ++ N + ++P  +  L +LE+L
Sbjct: 420 LPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDL 479

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
            +  NNLSSLPDS+G L +L  L    N L  +P ++ +   L+ L++D N L  LP  +
Sbjct: 480 RIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNI 539

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           GKI  L+ L V  N++  LP  + +L +L +L V+ N+L  +PES+     L  + +  N
Sbjct: 540 GKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKN 599

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
              L ++P ++  L  LE+    NN+++ LP     L  L  ++
Sbjct: 600 A--LVSMP-NMSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIK 640



 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 146/268 (54%), Gaps = 7/268 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SI KL +L +L L  N +  +P +I  L  L++L L+ N+I  LP+ IG L +L   
Sbjct: 90  LPGSICKLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETF 149

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N + ++P ++  L +L++     N LSSLP+SIG L +L KL V  N L  +P +I
Sbjct: 150 LISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSI 209

Query: 228 GQCSSLRELRVDYNRLKAL-----PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
              + L++LR+  N L  L     PE++  +H L  L +  NNI+ LP  +  L  LR+L
Sbjct: 210 CDLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKL 269

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L  +P S+C    L  + +  N   L +LP  IG L+ ++ L IS N I++LPD
Sbjct: 270 RMSSNSLTRLPHSICDLNKLEDLQLHMN--KLSSLPSQIGKLKHVKNLSISGNSIKILPD 327

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S   L +L  L    N +   P +I E+
Sbjct: 328 SIGDLQQLTRLYAHGNQISHLPESIWEL 355



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 144/271 (53%), Gaps = 5/271 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI++LP  IG+L  L  L +S N +  +P +I  L+ L+ L LH N++  LP  IG L 
Sbjct: 251 NNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIGKLK 310

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            +  L + GN I  LP ++  L +L  L    N +S LP+SI  L +L  + +  N L  
Sbjct: 311 HVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVT 370

Query: 223 LP---HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +     TI  CS +++L++  N L  LPE +G +H L+ LSV  N  K LP+++  L+ L
Sbjct: 371 VSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWL 430

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L    N++  +PES+     L  M +  N   L ++P +IG+L  LE+L I  N +  
Sbjct: 431 TRLYAHDNQITLLPESIGGLQDLKTMWVQEN--SLVSIPHNIGHLHQLEDLRIHKNNLSS 488

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LPDS   L+ L  L    N L   P ++ E+
Sbjct: 489 LPDSVGDLTNLTTLWASNNKLTSIPDSVCEL 519



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/312 (33%), Positives = 148/312 (47%), Gaps = 51/312 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SI  L+ L  L L  N++ ++P+ IG L  +K L +  N I  LPDSIGDL  L  L
Sbjct: 279 LPHSICDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKILPDSIGDLQQLTRL 338

Query: 168 DLRGNQISALPVALSRL--------------------------VRLEELDLGSNNLSSLP 201
              GNQIS LP ++  L                           ++++L L  N+LS LP
Sbjct: 339 YAHGNQISHLPESIWELRNLTTMWISRNSLVTVSINNGTIRNCSQIQDLQLHKNSLSYLP 398

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG---------- 251
           + IGSL  LKKL V  N  + LP +IG  + L  L    N++  LPE++G          
Sbjct: 399 EDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRLYAHDNQITLLPESIGGLQDLKTMWV 458

Query: 252 -------------KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
                         +H LE L +  NN+  LP ++  L++L  L  S N+L S+P+S+C 
Sbjct: 459 QENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPDSVGDLTNLTTLWASNNKLTSIPDSVCE 518

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  + +  N   L  LP +IG +  L+ L ++NN +  LPD    L  L  L V  N
Sbjct: 519 LHELQHLQLDTN--SLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKLHVANN 576

Query: 359 PLEVPPRNIVEM 370
            L   P +I ++
Sbjct: 577 QLSQLPESIRKL 588



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/343 (30%), Positives = 161/343 (46%), Gaps = 75/343 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+ IGKL +L +  +S+N +V++P +IG L+ L+    H N++  LP+SIG L 
Sbjct: 131 NQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQ 190

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI------------------ 204
           +L  L +  N ++++P ++  L +L++L L +NNLS LPD I                  
Sbjct: 191 NLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHG 250

Query: 205 ----------GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
                     G L  L+KL + +N L  LPH+I   + L +L++  N+L +LP  +GK+ 
Sbjct: 251 NNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIGKLK 310

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN---- 310
            ++ LS+  N+IK LP ++  L  L  L    N++  +PES+     L  M I  N    
Sbjct: 311 HVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNSLVT 370

Query: 311 -------------FADL------------------------------RALPRSIGNLEML 327
                          DL                              ++LP SIG+L  L
Sbjct: 371 VSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWL 430

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             L   +NQI +LP+S   L  L+ + VQEN L   P NI  +
Sbjct: 431 TRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHL 473



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 145/256 (56%), Gaps = 7/256 (2%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           ++DL +NRI  +P +I  L  L+ L +++NR+  LP SI  L +L  L L  N +  LP 
Sbjct: 56  NVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLTSLPGSICKLRNLSTLCLERNSLKTLPN 115

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ++  L +LE L L +N +S LP+ IG L +L+  ++  N L  +P +IG  + L++ +  
Sbjct: 116 SICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLVSIPDSIGDLNKLQDFQAH 175

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES-----VPE 294
            N+L +LPE++GK+  L  L V  N++  +P ++  L+ L++L +  N L       VPE
Sbjct: 176 RNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPE 235

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           S+C    L  + +  N  +++ LP+ IG L+ L +L +S+N +  LP S   L++L  L+
Sbjct: 236 SICDLHKLHDLQLHGN--NIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQ 293

Query: 355 VQENPLEVPPRNIVEM 370
           +  N L   P  I ++
Sbjct: 294 LHMNKLSSLPSQIGKL 309



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/245 (31%), Positives = 134/245 (54%), Gaps = 15/245 (6%)

Query: 121  LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
            +DL  N +  +P  I     L  L+++ N++  LP+S+ +L +L  L  + N++  LP  
Sbjct: 851  VDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDN 910

Query: 181  LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
               L +LE L++ +N + SLP+SIG L +L +L    N + ELP        L++L   Y
Sbjct: 911  FGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELP----DIRKLKKLTALY 966

Query: 241  --NRLKALP-----EAVGKIH-TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
              N  K  P     E +  +  TL+ L +  N++  LP ++S+L +L EL +  N+LES+
Sbjct: 967  LGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESL 1026

Query: 293  PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
            P+ +    +L K+ + NN   L++LP  I +L+ L++L +++N++  LP+    L  LR 
Sbjct: 1027 PDEIGKLGSLTKLWVHNNL--LKSLP-DISSLKQLQDLSLTDNKLEKLPEGIGNLKSLRS 1083

Query: 353  LRVQE 357
            +R  +
Sbjct: 1084 IRFND 1088



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 117/216 (54%), Gaps = 28/216 (12%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            LP+ I     L  L+++ N++  +P ++  L++LK+L    N +  LPD+ G+L  L YL
Sbjct: 861  LPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYL 920

Query: 168  DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD------------------------- 202
            ++  N++ +LP ++ +L  L +L   +N++S LPD                         
Sbjct: 921  NISNNKVKSLPESIGKLENLTQLCANNNSISELPDIRKLKKLTALYLGNNNKTRPNSKFS 980

Query: 203  -SIGSL-ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
              I +L I+LK L +  N L  LP +I    +L EL +  N+L++LP+ +GK+ +L  L 
Sbjct: 981  ECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDEIGKLGSLTKLW 1040

Query: 261  VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            V  N +K LP  +SSL  L++L ++ N+LE +PE +
Sbjct: 1041 VHNNLLKSLP-DISSLKQLQDLSLTDNKLEKLPEGI 1075



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/204 (32%), Positives = 108/204 (52%), Gaps = 10/204 (4%)

Query: 167  LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
            +DL+ N ++ LP  ++   +L  L++ +N L  LP+S+  L +LK+L+ + N+L+ LP  
Sbjct: 851  VDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNELDTLPDN 910

Query: 227  IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
             G+ S L  L +  N++K+LPE++GK+  L  L    N+I +LP     +  L++L   +
Sbjct: 911  FGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELP----DIRKLKKLTALY 966

Query: 287  --NELESVPESL---CFATTLVKMNIGNNFAD-LRALPRSIGNLEMLEELDISNNQIRVL 340
              N  ++ P S    C +   + +     F + L +LP SI  L  LEEL I  N++  L
Sbjct: 967  LGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESL 1026

Query: 341  PDSFRMLSRLRVLRVQENPLEVPP 364
            PD    L  L  L V  N L+  P
Sbjct: 1027 PDEIGKLGSLTKLWVHNNLLKSLP 1050



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/198 (30%), Positives = 103/198 (52%), Gaps = 10/198 (5%)

Query: 181  LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
            L    R+ ++DL SN L++LP+ I     L  L +  N L+ LP ++ + ++L++L    
Sbjct: 842  LENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKN 901

Query: 241  NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
            N L  LP+  G++  LE L++  N +K LP ++  L +L +L  + N +  +P+ +    
Sbjct: 902  NELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELPD-IRKLK 960

Query: 301  TLVKMNIGNNFADLRALPRS-----IGNLEM-LEELDISNNQIRVLPDSFRMLSRLRVLR 354
             L  + +GNN    +  P S     I NL + L+ L +  N +  LP+S   L  L  L 
Sbjct: 961  KLTALYLGNNN---KTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELM 1017

Query: 355  VQENPLEVPPRNIVEMGA 372
            +QEN LE  P  I ++G+
Sbjct: 1018 IQENKLESLPDEIGKLGS 1035



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 111/242 (45%), Gaps = 27/242 (11%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PDS+ +L  L  L L  N +  +P  IG +S LK L ++ N +  LPD IG+L +L  L
Sbjct: 512 IPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVNNNSLTTLPDRIGNLHTLEKL 571

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ+S LP ++ +L  L  L +  N L S+P+ +  L  L++   E N+L+ LP  I
Sbjct: 572 HVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPN-MSYLHKLEQFRFENNELQSLPRGI 630

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN---NIKQLPTTMSSLSSLRELDV 284
                L  ++ D +    + +  GK+   ++LS  YN   N    PT  +++S+  +L  
Sbjct: 631 DTLRHLHTIKFDVD----IKDNKGKVQ--QLLSKLYNEETNSNPRPTESTTMSTPTKLKH 684

Query: 285 SFNELESVPESLCF------------ATTLVKMNIGNNFADLRALPRSIGNLE-MLEELD 331
           S    E VP                 A          N AD         NLE M E LD
Sbjct: 685 S----EEVPMGAGIQRYVMGNKPKGQAIIFNNHTFNGNMADRDGTGIDERNLEKMFENLD 740

Query: 332 IS 333
           I+
Sbjct: 741 IT 742


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  145 bits (365), Expect = 4e-32,   Method: Composition-based stats.
 Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++G+ E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLETLPDGIAKLSRLTILKLDQN--RLQRLNDTLGSCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGRMTKLSNLNVDRNALEYLPLEI 332



 Score =  137 bits (344), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 92/268 (34%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L  L
Sbjct: 121 LPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP+ I
Sbjct: 181 DLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEI 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               SL +L +  N L+ LP+ + K+  L +L +  N +++L  T+ S  +++EL ++ N
Sbjct: 241 SGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTEN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP      
Sbjct: 301 FLSELPASIGRMTKLSNLNVDRN--ALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNC 358

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           + L VL V  N L   P ++V +  +AV
Sbjct: 359 TVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  130 bits (328), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 88/268 (32%), Positives = 135/268 (50%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L  LP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LETLPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I  M
Sbjct: 285 TLGSCENMQELILTENFLSELPASIGRM 312



 Score =  130 bits (328), Expect = 1e-27,   Method: Composition-based stats.
 Identities = 82/197 (41%), Positives = 117/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N +  LP  +++L RL  L L  N L  L D++GS  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IG+ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  128 bits (321), Expect = 6e-27,   Method: Composition-based stats.
 Identities = 93/289 (32%), Positives = 144/289 (49%), Gaps = 33/289 (11%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L L+  L+ +   LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  L
Sbjct: 157 LELRENLLKH---LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRL 213

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  +G L  L YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L 
Sbjct: 214 PPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTILK 273

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           ++ N L+ L  T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  + 
Sbjct: 274 LDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIG 333

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
             ++L  L +  N+                         L+ LP  +GN  +L  LD+S 
Sbjct: 334 QCANLGVLSLRDNK-------------------------LKKLPPELGNCTVLHVLDVSG 368

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
           NQ+  LP S   L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 369 NQLLYLPYSLVNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  122 bits (307), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           K   R +   +K   ++  +P+ I + S +L  L L  N I  +P     L  L+KL L 
Sbjct: 9   KGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLQRLRKLGLS 68

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
            N I  LP  I +  +LV LD+  N I  +P  +  L  L+  D  SN +  LP     L
Sbjct: 69  DNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQL 128

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L  L +    L  LP   G  + L  L +  N LK LPE + ++  L+ L +  N I+
Sbjct: 129 KNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE 188

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L  L EL +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L
Sbjct: 189 DLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSEN--RLEELPNEISGLVSL 246

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            +LD++ N +  LPD    LSRL +L++ +N L+
Sbjct: 247 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQ 280


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 143/254 (56%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G LS L+ L+L  N +  +P SI  L  L
Sbjct: 140 ITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L ++  L+EL L +N+L ++P SIG L  L+ L +  N +E L 
Sbjct: 200 ERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLD 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ SLS L ELD 
Sbjct: 260 ADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDC 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L       NF  L  LPR IGN + +  + + +N++  LPD  
Sbjct: 320 SCNELESLPPTIGYLHSLRTFAADENF--LSELPREIGNCKNVTVMSLRSNKLEFLPDEI 377

Query: 345 RMLSRLRVLRVQEN 358
             +++LRVL + +N
Sbjct: 378 GQMTKLRVLNLSDN 391



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N I   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 97  LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 156

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L ++P SI  L  L++L + +N+  E+P  +
Sbjct: 157 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVL 216

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+EL +D N L+ +P ++GK+  L  L +  N I+ L   +S   +L +L +S N
Sbjct: 217 EQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSN 276

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L +LP +IG+L +LEELD S N++  LP +   L
Sbjct: 277 MLQHLPDSIGMLKKLTTLKVDDN--QLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYL 334

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR     EN L   PR I
Sbjct: 335 HSLRTFAADENFLSELPREI 354



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/199 (39%), Positives = 118/199 (59%), Gaps = 2/199 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   +DN  ++ +P SIGKL  L  LDL++NRI  + A I G  +L+ L L +N +  
Sbjct: 221 NLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQH 280

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ+++LP  +  L  LEELD   N L SLP +IG L SL+  
Sbjct: 281 LPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTF 340

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
             + N L ELP  IG C ++  + +  N+L+ LP+ +G++  L VL++  N +K LP T 
Sbjct: 341 AADENFLSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTF 400

Query: 274 SSLSSLRELDVSFNELESV 292
           + L  L  L +S N+ +++
Sbjct: 401 TKLKDLAALWLSDNQSKAL 419



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/252 (31%), Positives = 123/252 (48%), Gaps = 46/252 (18%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD-------- 156
           +E+LP + G+LS L  L+L EN +  +P +I  L+ L++LDL +N   E+P+        
Sbjct: 163 LEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNL 222

Query: 157 ---------------SIGDLLSLVYLDLRGNQISAL-----------------------P 178
                          SIG L  L YLDL  N+I  L                       P
Sbjct: 223 KELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLP 282

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            ++  L +L  L +  N L+SLP++IGSL  L++L    N+LE LP TIG   SLR    
Sbjct: 283 DSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAA 342

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D N L  LP  +G    + V+S+R N ++ LP  +  ++ LR L++S N L+++P +   
Sbjct: 343 DENFLSELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTK 402

Query: 299 ATTLVKMNIGNN 310
              L  + + +N
Sbjct: 403 LKDLAALWLSDN 414



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/202 (28%), Positives = 101/202 (50%), Gaps = 2/202 (0%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +LKKL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 61  LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF 120

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P+ +     L V+    N I +LP   + L +L +L ++   LE +P +    + L  + 
Sbjct: 121 PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE 180

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ +P+SI  L  LE LD+ +N+   +P+    +  L+ L +  N L+  P +
Sbjct: 181 LRENH--LKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGS 238

Query: 367 IVEMGAQAVVQYMADLVEKRDA 388
           I ++     +    + +E  DA
Sbjct: 239 IGKLRQLRYLDLAKNRIETLDA 260



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + S   +L EL +  N++E +P+ L     L K+++ +
Sbjct: 32  GEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPD 91

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL  LP +I +L  L+ELDIS N I+  PD+ +    L V+    NP+   P    +
Sbjct: 92  N--DLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 149

Query: 370 M 370
           +
Sbjct: 150 L 150


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  145 bits (365), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  LP  +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  L   IG L+ L++L++ +NQ+  
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 316 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 346



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/307 (31%), Positives = 158/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 146 YLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  LP  +GK+  L  L++  N
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++   +     L  +N+ +N              
Sbjct: 266 QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 326 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 385

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 386 PKEIGQL 392



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 146/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++P  +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  L  
Sbjct: 238 NLSDNQLTTLPIEIGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSI 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 296 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 323



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 141/262 (53%), Gaps = 8/262 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+ +N   L  LP  IG L+ L  L++S+NQ+  LP     L  L  L +  N L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 361 EVPPRNIVEMGAQAVVQYMADL 382
                  +E+G    +Q + DL
Sbjct: 291 TTLS---IEIGK---LQNLQDL 306



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 136/251 (54%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 150 NQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L++LP  IG L +L  L +  N L  
Sbjct: 210 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  L   +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 270 LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 387

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 388 EIGQLKNLQTL 398



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 127/230 (55%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 181 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  LP  IG L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   I
Sbjct: 238 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 407



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +S+NQ+  LP     L  L  L + +N L   P   +E+G 
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLP---IEIGK 253



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   +    LNL +   + +  LP  IGKL +L +L+LS+N++  +P  IG L +L  
Sbjct: 226 IEIGKLQNLHTLNLSD---NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHT 282

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N++  L   IG L +L  L+L  NQ++ L   + +L  L+ L L  N L  LP  
Sbjct: 283 LNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKE 342

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L  LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L +  
Sbjct: 343 IGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGG 402

Query: 264 NN 265
           +N
Sbjct: 403 HN 404


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N++   P  I  L SL  L
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L   P  I
Sbjct: 122 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 242 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 299

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 300 KNLKMLSLDANQLTALPKEI 319



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 138/255 (54%), Gaps = 5/255 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    L L N   + +  LP  IG+L +L  L+L  N++  +   I  L +L+KL
Sbjct: 111 EIEQLKSLHKLYLSN---NQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++   P  IG L +L  L L  NQ++  P  + +L  L+EL L +N L++ P  I
Sbjct: 168 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 227

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  +P+ IG+   L+EL +D N+L  +P+ +G++  L+VL + YN
Sbjct: 228 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +P     L +L+ L +  N+L ++P+ +     L  +N+  N   L  +P+ IG L
Sbjct: 288 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN--QLTTIPKEIGQL 345

Query: 325 EMLEELDISNNQIRV 339
           + L+ L + NNQ+ +
Sbjct: 346 QNLQTLYLRNNQLSI 360



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 25/138 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +   +LK LPE +G++  L++L +  N +  LP  +  L +L+EL +++N+L + 
Sbjct: 49  VRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT- 107

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                    P+ I  L+ L +L +SNNQ+ +LP     L  L+ 
Sbjct: 108 ------------------------FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQE 143

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L+   + I ++
Sbjct: 144 LNLWNNQLKTISKEIEQL 161


>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
           2006001855]
          Length = 331

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 147/265 (55%), Gaps = 19/265 (7%)

Query: 101 LMDNIEW----------LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           L  N+EW          LP  IG L+ L  L L+EN++  +P  IG L +LK+L L  N 
Sbjct: 64  LFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPDEIGQLQNLKELFLFYNY 123

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP  IG+L +L  L +  N++ ALP  + +L  L++  L  N L  LP  IG L +L
Sbjct: 124 LSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGRLQNL 183

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           ++L + +N    LP  IGQ S+L+ L +D+N L  LP+ +G++  LE L++  N+++ LP
Sbjct: 184 EELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLSRLETLTLFRNSLETLP 243

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L +LRELD+S+N L S+P+ +     L  +++      L  LP  IG L+ LEEL
Sbjct: 244 EEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRK--TPLARLPDEIGELQDLEEL 301

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRV 355
            ++       PD+F    R ++ R+
Sbjct: 302 ILN-------PDTFEKEEREKLKRL 319



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 142/267 (53%), Gaps = 2/267 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL   R+  +   I    +L+   L  N+I  LP  IG L  L  L L  NQ++ LP  
Sbjct: 48  LDLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLPDE 107

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL L  N LS LP  IG+L +L++L ++ N LE LP+ IG+ ++L++  + +
Sbjct: 108 IGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGLSH 167

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRLK LP+ +G++  LE L++  N    LP  +  LS+L+ L +  N L ++P+ +   +
Sbjct: 168 NRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLS 227

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + +  N   L  LP  IG L  L ELD+S N +  +P     L  LR+L +++ PL
Sbjct: 228 RLETLTLFRN--SLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKTPL 285

Query: 361 EVPPRNIVEMGAQAVVQYMADLVEKRD 387
              P  I E+     +    D  EK +
Sbjct: 286 ARLPDEIGELQDLEELILNPDTFEKEE 312


>gi|238753349|ref|ZP_04614712.1| Leucine-rich repeat (LRR) protein [Yersinia ruckeri ATCC 29473]
 gi|238708302|gb|EEQ00657.1| Leucine-rich repeat (LRR) protein [Yersinia ruckeri ATCC 29473]
          Length = 300

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 156/285 (54%), Gaps = 5/285 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+  K ++++   P+S+     L  + L  N + + P  I  L +L+ L++  N I  +
Sbjct: 21  LNMDGKGLNSV---PESLAARGGLREISLYNNNLNSFPLQICTLKALQVLNISCNNIPAI 77

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  I +L +L  LDL  NQI ++P  L  L  LE L L +N L SLP+++ +L  L  L 
Sbjct: 78  PVDIAELSALRMLDLGHNQIDSIPAELGDLTHLEYLYLSNNKLKSLPETLSALRHLVYLN 137

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           V  N LE++P  I   S+L ELR+  N +  LP+++G++  ++ L +  NNI+ +   ++
Sbjct: 138 VTDNQLEDIPEAIFSLSTLEELRLYNNAITILPQSIGRLQQMQELHLMKNNIESIDKGIA 197

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           SL+ LR LD+S N L  +P+  C    L  +N    F  L  LP + G L+ L+ LD+  
Sbjct: 198 SLTKLRVLDISDNCLRQLPDEFCRLAQLTDVNF--RFNQLSQLPDNFGELKNLQTLDLRA 255

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           NQ+  LPDSF  L++L+ L ++ N     P  +  + A+  + ++
Sbjct: 256 NQLSALPDSFAELNQLKRLDLRWNNFSRLPEIVATLMARGCLVHI 300



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 128/237 (54%), Gaps = 2/237 (0%)

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
           T G + S + L++    +  +P+S+     L  + L  N +++ P+ +  L  L+ L++ 
Sbjct: 11  TDGVVESKQVLNMDGKGLNSVPESLAARGGLREISLYNNNLNSFPLQICTLKALQVLNIS 70

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            NN+ ++P  I  L +L+ L +  N ++ +P  +G  + L  L +  N+LK+LPE +  +
Sbjct: 71  CNNIPAIPVDIAELSALRMLDLGHNQIDSIPAELGDLTHLEYLYLSNNKLKSLPETLSAL 130

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L  L+V  N ++ +P  + SLS+L EL +  N +  +P+S+     + ++++  N  +
Sbjct: 131 RHLVYLNVTDNQLEDIPEAIFSLSTLEELRLYNNAITILPQSIGRLQQMQELHLMKN--N 188

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + ++ + I +L  L  LDIS+N +R LPD F  L++L  +  + N L   P N  E+
Sbjct: 189 IESIDKGIASLTKLRVLDISDNCLRQLPDEFCRLAQLTDVNFRFNQLSQLPDNFGEL 245



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 2/175 (1%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           KL SL E  S    R L   N   + +E +P++I  LS+L  L L  N I  +P +IG L
Sbjct: 119 KLKSLPETLS--ALRHLVYLNVTDNQLEDIPEAIFSLSTLEELRLYNNAITILPQSIGRL 176

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             +++L L  N I  +   I  L  L  LD+  N +  LP    RL +L +++   N LS
Sbjct: 177 QQMQELHLMKNNIESIDKGIASLTKLRVLDISDNCLRQLPDEFCRLAQLTDVNFRFNQLS 236

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            LPD+ G L +L+ L +  N L  LP +  + + L+ L + +N    LPE V  +
Sbjct: 237 QLPDNFGELKNLQTLDLRANQLSALPDSFAELNQLKRLDLRWNNFSRLPEIVATL 291



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 99/183 (54%), Gaps = 2/183 (1%)

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G + S + L ++   L  +P ++     LRE+ +  N L + P  +  +  L+VL++  N
Sbjct: 13  GVVESKQVLNMDGKGLNSVPESLAARGGLREISLYNNNLNSFPLQICTLKALQVLNISCN 72

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           NI  +P  ++ LS+LR LD+  N+++S+P  L   T L  + + NN   L++LP ++  L
Sbjct: 73  NIPAIPVDIAELSALRMLDLGHNQIDSIPAELGDLTHLEYLYLSNN--KLKSLPETLSAL 130

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
             L  L++++NQ+  +P++   LS L  LR+  N + + P++I  +     +  M + +E
Sbjct: 131 RHLVYLNVTDNQLEDIPEAIFSLSTLEELRLYNNAITILPQSIGRLQQMQELHLMKNNIE 190

Query: 385 KRD 387
             D
Sbjct: 191 SID 193


>gi|124010197|ref|ZP_01694853.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
 gi|123983741|gb|EAY24168.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
          Length = 515

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 107/317 (33%), Positives = 165/317 (52%), Gaps = 45/317 (14%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP SIGKL  L +L L  + + A+P +IG L +LKKL L A+ + +LP SIG L 
Sbjct: 156 NNLRVLPKSIGKLQKLDTLRLQAHGLRALPKSIGKLQNLKKLILRADALKKLPKSIGRLP 215

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ LP  LS+L +L+++ L   +L +LP SIG+   L+ L +E N L  
Sbjct: 216 NLEQLVLQANRLTTLPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFPELEMLELEVNSLVA 275

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV-----------------------L 259
           L   IGQ   L+ L++   R   LP+++G +  LE+                       L
Sbjct: 276 LTPGIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVPLTTLPEGIGNLKKLRRL 335

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSF-----------------NELESVPESLCFATTL 302
            +  + +  LP  + +L +LREL   +                  +L ++PES+     L
Sbjct: 336 QILKSKLTTLPEAIGNLKNLRELLFRYRYKPSGESLRYREGGRNGQLATLPESIGKLQNL 395

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           V +N+ +N   L  LP+SIGNL+ LE +D+S N++   PDSF  LSRL  L    N L  
Sbjct: 396 VLLNLSHN--QLTQLPKSIGNLQNLEYMDLSYNRLITFPDSFSKLSRLGSLYSNHNQLTS 453

Query: 363 PPRNIVEMGAQAVVQYM 379
            P++I   GA   + Y+
Sbjct: 454 LPKSI---GALKGLMYL 467



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 143/285 (50%), Gaps = 42/285 (14%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK------------------- 143
           D ++ LP SIG+L +L  L L  NR+  +P  +  L  LKK                   
Sbjct: 202 DALKKLPKSIGRLPNLEQLVLQANRLTTLPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFP 261

Query: 144 ----LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
               L+L  N ++ L   IG    L YL +   + + LP ++  L  LE L L +  L++
Sbjct: 262 ELEMLELEVNSLVALTPGIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVPLTT 321

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY-----------------NR 242
           LP+ IG+L  L++L +  + L  LP  IG   +LREL   Y                  +
Sbjct: 322 LPEGIGNLKKLRRLQILKSKLTTLPEAIGNLKNLRELLFRYRYKPSGESLRYREGGRNGQ 381

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  LPE++GK+  L +L++ +N + QLP ++ +L +L  +D+S+N L + P+S    + L
Sbjct: 382 LATLPESIGKLQNLVLLNLSHNQLTQLPKSIGNLQNLEYMDLSYNRLITFPDSFSKLSRL 441

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
              ++ +N   L +LP+SIG L+ L  L +  NQ++ LP+SF  L
Sbjct: 442 --GSLYSNHNQLTSLPKSIGALKGLMYLQLRYNQLKALPESFYKL 484



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/251 (31%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D++  LP SI K+ +L  L L+ N +  +P  IG L  L++L++ +N +  LP SIG L 
Sbjct: 110 DSLIALPKSISKIKNLSYLVLNVNSLTRLPKGIGKLQKLQRLEIRSNNLRVLPKSIGKLQ 169

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L+ + + ALP ++ +L  L++L L ++ L  LP SIG L +L++L+++ N L  
Sbjct: 170 KLDTLRLQAHGLRALPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQANRLTT 229

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q   L+++ +    L  LP+++G    LE+L +  N++  L   +     L+ L
Sbjct: 230 LPKNLSQLPKLKKMTLIVRSLHTLPKSIGNFPELEMLELEVNSLVALTPGIGQFKRLKYL 289

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +      ++P+S+     L  + + N    L  LP  IGNL+ L  L I  +++  LP+
Sbjct: 290 KIVNGRFATLPQSIGDLQNLEMLFLLN--VPLTTLPEGIGNLKKLRRLQILKSKLTTLPE 347

Query: 343 SFRMLSRLRVL 353
           +   L  LR L
Sbjct: 348 AIGNLKNLREL 358



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           I  L  L+ L +    +  LP++ G+L +L +L ++ + + ALP ++S++  L  L L  
Sbjct: 74  ISELKYLRDLIIKCKNLKTLPENFGEL-NLSFLRIKSDSLIALPKSISKIKNLSYLVLNV 132

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N+L+ LP  IG L  L++L + +N+L  LP +IG+   L  LR+  + L+ALP+++GK+ 
Sbjct: 133 NSLTRLPKGIGKLQKLQRLEIRSNNLRVLPKSIGKLQKLDTLRLQAHGLRALPKSIGKLQ 192

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ L +R + +K+LP ++  L +L +L +  N L ++P++L     L KM +      L
Sbjct: 193 NLKKLILRADALKKLPKSIGRLPNLEQLVLQANRLTTLPKNLSQLPKLKKMTL--IVRSL 250

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+SIGN   LE L++  N +  L        RL+ L++        P++I ++
Sbjct: 251 HTLPKSIGNFPELEMLELEVNSLVALTPGIGQFKRLKYLKIVNGRFATLPQSIGDL 306



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 115/226 (50%), Gaps = 18/226 (7%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++++  L   IG+   L  L +   R   +P +IG L +L+ L L    +  LP+ IG+L
Sbjct: 270 VNSLVALTPGIGQFKRLKYLKIVNGRFATLPQSIGDLQNLEMLFLLNVPLTTLPEGIGNL 329

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEEL----------------DLGSNN-LSSLPDSI 204
             L  L +  ++++ LP A+  L  L EL                + G N  L++LP+SI
Sbjct: 330 KKLRRLQILKSKLTTLPEAIGNLKNLRELLFRYRYKPSGESLRYREGGRNGQLATLPESI 389

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L  L +  N L +LP +IG   +L  + + YNRL   P++  K+  L  L   +N
Sbjct: 390 GKLQNLVLLNLSHNQLTQLPKSIGNLQNLEYMDLSYNRLITFPDSFSKLSRLGSLYSNHN 449

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  LP ++ +L  L  L + +N+L+++PES  +   L+ + I +N
Sbjct: 450 QLTSLPKSIGALKGLMYLQLRYNQLKALPESF-YKLDLMNLFIAHN 494



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 91/181 (50%), Gaps = 18/181 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA---------------- 148
           +  LP+ IG L  L  L + ++++  +P  IG L +L++L                    
Sbjct: 319 LTTLPEGIGNLKKLRRLQILKSKLTTLPEAIGNLKNLRELLFRYRYKPSGESLRYREGGR 378

Query: 149 -NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
             ++  LP+SIG L +LV L+L  NQ++ LP ++  L  LE +DL  N L + PDS   L
Sbjct: 379 NGQLATLPESIGKLQNLVLLNLSHNQLTQLPKSIGNLQNLEYMDLSYNRLITFPDSFSKL 438

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
             L  L    N L  LP +IG    L  L++ YN+LKALPE+  K+  + +  + +N   
Sbjct: 439 SRLGSLYSNHNQLTSLPKSIGALKGLMYLQLRYNQLKALPESFYKLDLMNLF-IAHNKFS 497

Query: 268 Q 268
           Q
Sbjct: 498 Q 498



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           AL   +    R++ + L  +N+++L   I  L  L+ LI++  +L+ LP   G+ + L  
Sbjct: 46  ALATQVKSSRRIKAMVLYGDNVTNLSPRISELKYLRDLIIKCKNLKTLPENFGELN-LSF 104

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           LR+  + L ALP+++ KI  L  L +  N++ +LP  +  L  L+ L++  N L  +P+S
Sbjct: 105 LRIKSDSLIALPKSISKIKNLSYLVLNVNSLTRLPKGIGKLQKLQRLEIRSNNLRVLPKS 164

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L  + +  +   LRALP+SIG L+ L++L +  + ++ LP S   L  L  L +
Sbjct: 165 IGKLQKLDTLRLQAH--GLRALPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVL 222

Query: 356 QENPLEVPPRNIVEM 370
           Q N L   P+N+ ++
Sbjct: 223 QANRLTTLPKNLSQL 237



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 95/196 (48%), Gaps = 36/196 (18%)

Query: 197 LSSLPDSIGSLIS----LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            SS+ D++ + +     +K +++  +++  L   I +   LR+L +    LK LPE  G+
Sbjct: 40  FSSVEDALATQVKSSRRIKAMVLYGDNVTNLSPRISELKYLRDLIIKCKNLKTLPENFGE 99

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           ++ L  L ++ +++  LP ++S + +L  L ++ N L                       
Sbjct: 100 LN-LSFLRIKSDSLIALPKSISKIKNLSYLVLNVNSLTR--------------------- 137

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
               LP+ IG L+ L+ L+I +N +RVLP S   L +L  LR+Q + L   P++I ++  
Sbjct: 138 ----LPKGIGKLQKLQRLEIRSNNLRVLPKSIGKLQKLDTLRLQAHGLRALPKSIGKL-- 191

Query: 373 QAVVQYMADLVEKRDA 388
               Q +  L+ + DA
Sbjct: 192 ----QNLKKLILRADA 203


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 134/252 (53%), Gaps = 25/252 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IGKL  L  L L  NR+  +P  IG L +L+ L+L  NR+I LP  IG L  L +L
Sbjct: 18  LPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWL 77

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L RLE L L +N L  LP  IG L +LK+LI+E N L  LP  I
Sbjct: 78  YLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLATLPKEI 137

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ L +  N+L  LP+ +G+                       L +L++LD+S N
Sbjct: 138 GTLRKLQHLYLANNQLATLPKEIGQ-----------------------LQNLKDLDLSDN 174

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L  +++ NN   LR LP+ IG L+ L++LD+S N     P     L
Sbjct: 175 QLVTLPEEIGTLQRLEWLSLKNN--QLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGL 232

Query: 348 SRLRVLRVQENP 359
             L+ L +Q  P
Sbjct: 233 KHLKTLVLQNIP 244



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 126/229 (55%), Gaps = 2/229 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK L L  N++  LP+ IG L  L YL L  N+++ LP  +  L  L+ L+L +N L +
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG+L  L+ L +  N L  LP  IG+   L  L ++ N+L+ LP+ +GK+  L+ L
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKEL 123

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  + +L  L+ L ++ N+L ++P+ +     L  +++ +N   L  LP 
Sbjct: 124 ILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDN--QLVTLPE 181

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            IG L+ LE L + NNQ+R LP     L  L+ L +  NP    P+ IV
Sbjct: 182 EIGTLQRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 230



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 120/208 (57%), Gaps = 2/208 (0%)

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L +L L  NQ++ LP  + +L +LE L L +N L++LP+ IG+L +L+ L +E N L  
Sbjct: 4   ALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLIT 63

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L  L +  N+L  LP+ +GK+  LE L +  N ++ LP  +  L +L+EL
Sbjct: 64  LPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKEL 123

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L ++P+ +     L  + + NN   L  LP+ IG L+ L++LD+S+NQ+  LP+
Sbjct: 124 ILENNRLATLPKEIGTLRKLQHLYLANN--QLATLPKEIGQLQNLKDLDLSDNQLVTLPE 181

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L RL  L ++ N L   P+ I ++
Sbjct: 182 EIGTLQRLEWLSLKNNQLRTLPQEIGQL 209


>gi|398334690|ref|ZP_10519395.1| lipoprotein [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
          Length = 345

 Score =  145 bits (365), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 167/308 (54%), Gaps = 7/308 (2%)

Query: 60  IMIMCMCCVGQ-DGEKLSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSS 117
           ++++ +C   +   EK+     ++L I + +    R+LNL       I  LP  I +  +
Sbjct: 26  VILLTICLFAELQAEKVVPGSYSNLTIALENPLKVRELNLS---WQEITSLPSDIERFQN 82

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L SL+L +N + ++P  IG L +LK L+L  N +I  P  I  L  L+ LD  GN++  L
Sbjct: 83  LKSLNLFKNNLESLPVEIGKLKNLKSLNLGLNPLITFPKEIEQLNDLLELDFSGNKLEVL 142

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P  + +L  L +L+L  N L++LP  IG L +L+KL + +N+L  LP  IGQ  +L+EL 
Sbjct: 143 PPEILQLKNLTDLNLLGNELTALPIEIGVLQNLQKLNLYSNELIRLPREIGQLQNLQELS 202

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           + YN+L ++PE +G++ +L++L++  N    LP  +  L +L+ELD+S N     P+ + 
Sbjct: 203 IHYNKLVSIPEEIGQLKSLKILNLSQNQFTSLPEEIRELHNLKELDLSNNPQLIFPKEIM 262

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
           F   L ++ +  N  +L   P  I  L  L  L +  N I   P+  + L  LR+L +  
Sbjct: 263 FLKNLQELRLMKN--NLNTFPIEILQLRNLRSLGLGGNNIISFPNEIKQLQSLRILSLDH 320

Query: 358 NPLEVPPR 365
           + + +P +
Sbjct: 321 SVIPIPKK 328



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 80/248 (32%), Positives = 127/248 (51%), Gaps = 9/248 (3%)

Query: 130 AVPATIGGLS-------SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
            VP +   L+        +++L+L    I  LP  I    +L  L+L  N + +LPV + 
Sbjct: 42  VVPGSYSNLTIALENPLKVRELNLSWQEITSLPSDIERFQNLKSLNLFKNNLESLPVEIG 101

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L+ L+LG N L + P  I  L  L +L    N LE LP  I Q  +L +L +  N 
Sbjct: 102 KLKNLKSLNLGLNPLITFPKEIEQLNDLLELDFSGNKLEVLPPEILQLKNLTDLNLLGNE 161

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L ALP  +G +  L+ L++  N + +LP  +  L +L+EL + +N+L S+PE +    +L
Sbjct: 162 LTALPIEIGVLQNLQKLNLYSNELIRLPREIGQLQNLQELSIHYNKLVSIPEEIGQLKSL 221

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             +N+  N     +LP  I  L  L+ELD+SNN   + P     L  L+ LR+ +N L  
Sbjct: 222 KILNLSQN--QFTSLPEEIRELHNLKELDLSNNPQLIFPKEIMFLKNLQELRLMKNNLNT 279

Query: 363 PPRNIVEM 370
            P  I+++
Sbjct: 280 FPIEILQL 287


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 74  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 133

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 134 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 193

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 194 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 253

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 254 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 313

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 314 YQN--RLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 371

Query: 368 VEM 370
            ++
Sbjct: 372 KQL 374



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 96/278 (34%), Positives = 152/278 (54%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 115 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 171

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 172 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 231

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 232 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 291

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L ++PE +     L K+++  N   L  LP+ IG
Sbjct: 292 YNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRN--QLTTLPKEIG 349

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  N L
Sbjct: 350 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNSL 387



 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 147/288 (51%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 63  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 122

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 123 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 182

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 183 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 242

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 243 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 300

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++  LP+    L  L+ L +  N L   P+ I
Sbjct: 301 EITQFQNLQVLDLYQNRLTTLPEEIGQLQNLQKLHLSRNQLTTLPKEI 348



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 56  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 115

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 116 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 175

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 176 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 235

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 236 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 293

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 294 RFEAFPKEITQFQNLQVL----DLYQNR 317



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 107/184 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  NR+  +P  IG L +L+ LDL+ NR+  LP  IG L +L+ L
Sbjct: 206 LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVL 265

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ++ LP  +++L  L+EL+L  N   + P  I    +L+ L +  N L  LP  I
Sbjct: 266 DLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTLPEEI 325

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +  N+L  LP+ +G++  LE L + +N +  LP  +  L +L++L +  N
Sbjct: 326 GQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNN 385

Query: 288 ELES 291
            L S
Sbjct: 386 SLPS 389


>gi|197632025|gb|ACH70736.1| leucine rich repeat containing 40 [Salmo salar]
          Length = 600

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 164/278 (58%), Gaps = 5/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E L + +  L +L  LD+ +N++ ++P +IG L  L+KL L  N++ ELP  +  L 
Sbjct: 91  NKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSLK 150

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N +  LP  +  L  L+++DL +N L+++PDS+G+L  L KL +  N L+ 
Sbjct: 151 NLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKS 210

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    +LR L   +N+L+++P  + ++ +LE L +R+N ++ LP   S  S L+EL
Sbjct: 211 LPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLKEL 268

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L   +TL  + + +N   ++ LP  I  L+ LE LD+ NN I  LP
Sbjct: 269 HVGNNQIEVLEAEHLKHLSTLSVLELRDN--KVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +  +L +L++L ++ NPL    R+++  G   +++Y+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYL 364



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 133/309 (43%), Gaps = 36/309 (11%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------- 149
           +L DN ++ LP+ I  L  L  LDL  N I ++PA +  L  LK L L  N         
Sbjct: 293 ELRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDL 352

Query: 150 --------------RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
                         RI E PD  GD       D      S   + +  +  L+ LD    
Sbjct: 353 LTKGTNELLKYLRGRIKEDPDGKGD-----EPDTAMTLPSQAKINVHTIKTLKILDYSEK 407

Query: 196 NLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCS-SLRELRVDYNRLKALPEAVG 251
            ++ +PD +   +    +  +    N L  +P  + +   S+ ++ + +N+L +LP    
Sbjct: 408 QMACVPDDVFDAVGSEPVASVNFSKNQLAAVPPRLVELKDSVSDINLGFNKLTSLPLEFC 467

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            +  L  + +R N +  LP  + +L  LR + +SFN  +  PE L    +L  + I NN 
Sbjct: 468 MLQQLAHIDLRNNLLTSLPMEIEALMKLRSITLSFNRFKLFPEVLYRVPSLETILISNN- 526

Query: 312 ADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             + A+ P  +  L+ L  LD+ NN I  +P      + LR L +  NP   P   IV  
Sbjct: 527 -QVGAINPLQLKALDKLSTLDLQNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAIVSR 585

Query: 371 GAQAVVQYM 379
           G  AV++Y+
Sbjct: 586 GTDAVLEYL 594


>gi|345324055|ref|XP_001513272.2| PREDICTED: leucine-rich repeat protein SHOC-2 [Ornithorhynchus
           anatinus]
          Length = 537

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 99/261 (37%), Positives = 157/261 (60%), Gaps = 6/261 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS----LKKLIVETN 218
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+    + S    L KL ++ N
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDN 344

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP   G  +S+ EL +  N+L  +PE V  + +LEVL +  N +K+LP  + +L  
Sbjct: 345 QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRK 404

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELD+  N+LES+P  + +   L K+ + NN   L  LPR IG+L  L  L +  N + 
Sbjct: 405 LRELDLEENKLESLPNEIAYLKDLQKLVLTNN--QLTTLPRGIGHLTNLTHLGLGENLLT 462

Query: 339 VLPDSFRMLSRLRVLRVQENP 359
            LP+    L  L  L + +NP
Sbjct: 463 HLPEEIGTLENLEELYLNDNP 483



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 143/292 (48%), Gaps = 29/292 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LPDS+  L  L  LDL  N++  +P+ +  L SL  L L  NR+  +   I +L 
Sbjct: 156 NSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLS 215

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L+ L +R N+I  LP  +  L  L  LD+  N L  LP  IG+   +  L ++ N+L +
Sbjct: 216 KLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD 275

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT--------------------------- 255
           LP TIG  SSL  L + YNRL A+P ++ K                              
Sbjct: 276 LPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPEXXFGIFSRAKV 335

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L+++ N +  LP    + +S+ EL+++ N+L  +PE +    +L  + + NN   L+
Sbjct: 336 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LK 393

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LP  +GNL  L ELD+  N++  LP+    L  L+ L +  N L   PR I
Sbjct: 394 KLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 445



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 149/293 (50%), Gaps = 29/293 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+++ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRMTTVEKDIKNLSKLIMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS---- 278
           LP  IG C+ +  L + +N L  LPE +G + +L  L +RYN +  +P +++  S+    
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 279 -----------------------LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
                                  L +L++  N+L S+P      T++V++N+  N   L 
Sbjct: 313 NLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATN--QLT 370

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            +P  +  L  LE L +SNN ++ LP     L +LR L ++EN LE  P  I 
Sbjct: 371 KIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIA 423



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 151/305 (49%), Gaps = 53/305 (17%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 163 S---------------------------LVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           +                           L  L+++ NQ+++LP+       + EL+L +N
Sbjct: 308 ALEELNLENNNISTLPEXXFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATN 367

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L+ +P+ +  L+SL+ LI+  N L++LPH +G    LREL ++ N+L++LP  +     
Sbjct: 368 QLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEI----- 422

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
                             + L  L++L ++ N+L ++P  +   T L  + +G N   L 
Sbjct: 423 ------------------AYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LT 462

Query: 316 ALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
            LP  IG LE LEEL +++N  +  LP    + S+L ++ ++  PL   P  IV  G   
Sbjct: 463 HLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSF 522

Query: 375 VVQYM 379
           ++Q++
Sbjct: 523 IIQFL 527



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/202 (35%), Positives = 114/202 (56%), Gaps = 2/202 (0%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL    I  LP SI +L  L  L L  N++ +LP  +  LV L  L L  N+L+SLPD
Sbjct: 104 RLDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPD 163

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+ +L  L+ L +  N L E+P  + +  SL  L + +NR+  + + +  +  L +LS+R
Sbjct: 164 SLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDIKNLSKLIMLSIR 223

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N IKQLP  +  L +L  LDV+ N+LE +P+ +   T +  +++ +N  +L  LP +IG
Sbjct: 224 ENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHN--ELLDLPETIG 281

Query: 323 NLEMLEELDISNNQIRVLPDSF 344
           NL  L  L +  N++  +P S 
Sbjct: 282 NLSSLNRLGLRYNRLSAIPRSL 303



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP
Sbjct: 105 LDLSKRSIHMLPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRMTTVEKDI 211


>gi|169260661|gb|ACA52057.1| densin 11-N6 [Rattus norvegicus]
          Length = 533

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 149/277 (53%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +    + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVTSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + RLRVL + +N L+  P +  ++   A + +++D
Sbjct: 370 GQMQRLRVLNLSDNRLKNLPFSFTKLKELAAL-WLSD 405



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++    +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVTSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++   
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVT 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 3/202 (1%)

Query: 167 LDLRGNQISALPVALSRLVR-LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           LD     +  +P  +    R LEEL L +N +  LP  + +  +L+KL +  NDL  LP 
Sbjct: 32  LDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPT 91

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +I    +L+EL +  N ++  PE +     L ++    N I +LP   + L +L +L ++
Sbjct: 92  SIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLN 151

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
              LE +P +      L  + +  N   L+ LP+S+  L  LE LD+ NN+   LP+   
Sbjct: 152 DAFLEFLPANFGRLVKLRILELRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLD 209

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            +  LR L +  N L+V P +I
Sbjct: 210 QIQNLRELWMDNNALQVLPGSI 231


>gi|443477390|ref|ZP_21067241.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
 gi|443017486|gb|ELS31914.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
          Length = 945

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 156/263 (59%), Gaps = 3/263 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  +PDSI  L++L  LDLS N+I  +P  I  L +L +L    N+I ++PD+I +L
Sbjct: 30  FNQITQIPDSICNLANLTLLDLSSNQITQIPDVICNLVNLTQLYFGCNQITQIPDAIANL 89

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  N IS +   L +L +L++L+L  N +S++P+ I  L +L+++ + +N + 
Sbjct: 90  ANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPEEISQLYNLEEIHLNSNRIN 149

Query: 222 ELPHTIGQCSSLRELRVDYNR-LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            +P TIG   +L+ L + YN+ +  +P+ + K+  L  + +  N I  +P  +S LS L+
Sbjct: 150 IIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYLEGNQIATIPHGISQLSKLQ 209

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            L ++ N++  +P  +   + L ++++  N   +R +P SI  L  L EL +S NQI ++
Sbjct: 210 TLMLNENQISIIPNEISNLSNLQELSLYKN--QIRLIPDSITKLSNLNELYLSRNQISMI 267

Query: 341 PDSFRMLSRLRVLRVQENPLEVP 363
           PDS   +++L+ L +++NPL +P
Sbjct: 268 PDSLSDMTKLKALGLRDNPLPIP 290



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 153/264 (57%), Gaps = 3/264 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I +L++L  L +  N+I  +P +I  L++L  LDL +N+I ++PD I +L++L  L
Sbjct: 13  IPQEIFQLTNLKELHIPFNQITQIPDSICNLANLTLLDLSSNQITQIPDVICNLVNLTQL 72

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
               NQI+ +P A++ L  L  L L +N++S++ D +  L  L+KL +  N +  +P  I
Sbjct: 73  YFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPEEI 132

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTMSSLSSLRELDVSF 286
            Q  +L E+ ++ NR+  +P+ +G ++ L+VL++ YN  I  +P T+S L +L  + +  
Sbjct: 133 SQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYLEG 192

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N++ ++P  +   + L  + +  N   +  +P  I NL  L+EL +  NQIR++PDS   
Sbjct: 193 NQIATIPHGISQLSKLQTLMLNEN--QISIIPNEISNLSNLQELSLYKNQIRLIPDSITK 250

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           LS L  L +  N + + P ++ +M
Sbjct: 251 LSNLNELYLSRNQISMIPDSLSDM 274



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/203 (33%), Positives = 119/203 (58%), Gaps = 5/203 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L N  + NI    D + KLS L  L+LS N+I  +P  I  L +L+++ L++NRI  +
Sbjct: 95  LHLSNNHISNI---TDKLFKLSKLQKLNLSLNKISTIPEEISQLYNLEEIHLNSNRINII 151

Query: 155 PDSIGDLLSLVYLDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           PD+IGDL +L  L+L  N QI  +P  +S+L  L  + L  N ++++P  I  L  L+ L
Sbjct: 152 PDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYLEGNQIATIPHGISQLSKLQTL 211

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           ++  N +  +P+ I   S+L+EL +  N+++ +P+++ K+  L  L +  N I  +P ++
Sbjct: 212 MLNENQISIIPNEISNLSNLQELSLYKNQIRLIPDSITKLSNLNELYLSRNQISMIPDSL 271

Query: 274 SSLSSLRELDVSFNELESVPESL 296
           S ++ L+ L +  N L  +PE +
Sbjct: 272 SDMTKLKALGLRDNPL-PIPEEI 293



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/182 (32%), Positives = 96/182 (52%), Gaps = 5/182 (2%)

Query: 75  LSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR-IVAVP 132
           LSL K++++  E+S      +++L +   + I  +PD+IG L +L  L+L+ N+ I  +P
Sbjct: 120 LSLNKISTIPEEISQLYNLEEIHLNS---NRINIIPDTIGDLYNLQVLNLAYNKQICTIP 176

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
            TI  L +L  + L  N+I  +P  I  L  L  L L  NQIS +P  +S L  L+EL L
Sbjct: 177 DTISKLFNLVTIYLEGNQIATIPHGISQLSKLQTLMLNENQISIIPNEISNLSNLQELSL 236

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N +  +PDSI  L +L +L +  N +  +P ++   + L+ L +  N L    E +  
Sbjct: 237 YKNQIRLIPDSITKLSNLNELYLSRNQISMIPDSLSDMTKLKALGLRDNPLPIPEEILNN 296

Query: 253 IH 254
            H
Sbjct: 297 YH 298



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 81/164 (49%), Gaps = 21/164 (12%)

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           + N L  +P  I Q ++L+EL + +N++  +P+++  +  L +L +  N I Q+P  + +
Sbjct: 6   KVNRLTAIPQEIFQLTNLKELHIPFNQITQIPDSICNLANLTLLDLSSNQITQIPDVICN 65

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD---------------------L 314
           L +L +L    N++  +P+++     L  +++ NN                        +
Sbjct: 66  LVNLTQLYFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKI 125

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
             +P  I  L  LEE+ +++N+I ++PD+   L  L+VL +  N
Sbjct: 126 STIPEEISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYN 169


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 150/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL+ N+   +P  IG L +L++L+L  N++  LP  IG L +L  L
Sbjct: 63  LPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++  P  + +L  L++L+L  N L++L   IG L +L+KL ++ N L  L   I
Sbjct: 123 ILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L++L +D NRLKALP  +G++  L+ L +  N +  LP  +  L +L+ L +  N
Sbjct: 183 GQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  +   NN  +L  LP+ IG L+ L+ L +S+NQ+  LP     L
Sbjct: 243 QLTILPKEIGQLQNLKLLYSVNN--ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 301 ENLQELYLNDNQLTTLPKEIGQL 323



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/276 (34%), Positives = 154/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL N  + N   LP  IG+L +L +L LS NR+   P  IG L +L+KL
Sbjct: 89  EIGQLQNLQELNLWNNQLKN---LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ L   + +L  L++L+L  N L +LP+ I
Sbjct: 146 NLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++  L++L    N
Sbjct: 206 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L  L+ L +S N+L ++P+ +     L ++ + +N   L  LP+ IG L
Sbjct: 266 ELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDN--QLTTLPKEIGQL 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+     NNQ+ +LP     L  L+ L++  N L
Sbjct: 324 KNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 359



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/297 (33%), Positives = 163/297 (54%), Gaps = 6/297 (2%)

Query: 75  LSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  KL +L  E+   +  + L+L N   +  + LP  IG+L +L  L+L  N++  +P 
Sbjct: 55  LSSQKLTTLPKEIKQLQNLKSLDLAN---NQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            IG L +L+ L L  NR+   P  IG L +L  L+L  NQ++ L   + +L  L++L+L 
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLD 171

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            N L++L   IG L +L+KL ++ N L+ LP+ IGQ  +L+EL +  N+L  LPE +G++
Sbjct: 172 YNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQL 231

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L+ L +  N +  LP  +  L +L+ L    NEL  +P+ +     L  + + +N   
Sbjct: 232 KNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN--Q 289

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  LP+ IG LE L+EL +++NQ+  LP     L  L+      N L + P+ I ++
Sbjct: 290 LTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQL 346



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/218 (32%), Positives = 128/218 (58%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L++ YN +  L   
Sbjct: 99  LNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L++ +N+L ++ + +     L K+N+  N   L+ALP  IG L+ L+EL +
Sbjct: 159 IGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKN--RLKALPNEIGQLQNLQELYL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           SNNQ+ +LP+    L  L+ L + +N L + P+ I ++
Sbjct: 217 SNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQL 254



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/213 (34%), Positives = 117/213 (54%), Gaps = 3/213 (1%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           L E+   K  + LNL     + +  L   IG+L +L  L+L +NR+ A+P  IG L +L+
Sbjct: 156 LQEIGQLKNLQKLNLD---YNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQ 212

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +L L  N++  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L   +N L+ LP 
Sbjct: 213 ELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ 272

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L  L+ L +  N L  LP  IGQ  +L+EL ++ N+L  LP+ +G++  L+     
Sbjct: 273 EIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISF 332

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
            N +  LP  +  L +L+ L ++ N+L S  E 
Sbjct: 333 NNQLTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 365


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 135 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 194

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 195 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 254

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 255 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 314

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 315 YQN--RLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 372

Query: 368 VEM 370
            ++
Sbjct: 373 KQL 375



 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 152/278 (54%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 116 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 172

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 173 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 232

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 233 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 292

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L  +PE +     L K+++  N   L  LP+ IG
Sbjct: 293 YNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRN--QLTTLPKEIG 350

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 351 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 388



 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 64  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 123

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 124 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 183

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 184 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 243

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 244 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 301

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++ +LP+    L  L+ L +  N L   P+ I
Sbjct: 302 EITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEI 349



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 57  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 116

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 117 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 176

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 177 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 236

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 237 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 294

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 295 RFEAFPKEITQFQNLQVL----DLYQNR 318


>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
 gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
          Length = 865

 Score =  144 bits (364), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 144/241 (59%), Gaps = 3/241 (1%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           +KLDL    + E+P  I  L SL YL+LR NQIS +P AL++L  L+ L L +N +S +P
Sbjct: 19  EKLDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIP 78

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++  L SL+ L +  N + E+   +   +SL+ L ++ N+++ +PEA+  + +L+ L +
Sbjct: 79  EALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYL 138

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N I ++P  ++ L+SL+ L +  N++  +PE+L   T+L  +++ NN   +R +P ++
Sbjct: 139 NNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDLDLSNN--QIREIPEAL 196

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPRNIVEMGAQAVVQYMA 380
            +L  L+ L + NNQIR +P++   L  L+ L +  NP+  VPP  I     QA+  Y+ 
Sbjct: 197 AHLTSLQRLYLDNNQIREIPEALAHLVNLKGLVLGNNPITNVPPEIICYDNPQAIFSYLK 256

Query: 381 D 381
           +
Sbjct: 257 N 257



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 135/228 (59%), Gaps = 3/228 (1%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           LI+ +  +    L+L NK   N+  +P  I +L+SL  L+L  N+I  +P  +  L+SL+
Sbjct: 9   LIQRAKDERAEKLDLSNK---NLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQ 65

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L L  N+I E+P+++  L SL  L+L  NQI  +  AL+ L  L+ L L +N +  +P+
Sbjct: 66  HLRLSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPE 125

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           ++  L SL+ L +  N + E+P  + Q +SL+ L +  N+++ +PEA+ ++ +L+ L + 
Sbjct: 126 ALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDLDLS 185

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            N I+++P  ++ L+SL+ L +  N++  +PE+L     L  + +GNN
Sbjct: 186 NNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLVNLKGLVLGNN 233



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 69/205 (33%), Positives = 127/205 (61%), Gaps = 4/205 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL+N   + I  +P+++ +L+SL  L LS N+I  +P  +  L+SL+ L+L+ N+I E+
Sbjct: 44  LNLRN---NQISEIPEALAQLTSLQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIREI 100

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
            +++  L SL  L L  NQI  +P AL+ L  L+ L L +N +S +P ++  L SL+ L 
Sbjct: 101 QEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLF 160

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N + E+P  + Q +SL++L +  N+++ +PEA+  + +L+ L +  N I+++P  ++
Sbjct: 161 LYNNQIREIPEALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALA 220

Query: 275 SLSSLRELDVSFNELESV-PESLCF 298
            L +L+ L +  N + +V PE +C+
Sbjct: 221 HLVNLKGLVLGNNPITNVPPEIICY 245


>gi|379731535|ref|YP_005323731.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378577146|gb|AFC26147.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 526

 Score =  144 bits (364), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/256 (37%), Positives = 142/256 (55%), Gaps = 7/256 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +IG   +L  L LSEN +  +P  IG   +L++L +  N +  LP+S+G L  L  L
Sbjct: 243 LPPTIGTWKNLRELRLSENNLETLPKAIGQCQALEQLIIQDNALATLPESMGQLKQLKTL 302

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL------IVETNDLE 221
            L+GNQ+  LP  L +   L  L LG N L  LP+ IG+L  LK L      + E N L 
Sbjct: 303 ALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPEEIGNLKQLKVLNLGEDPLSEGNQLV 362

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP+++GQ   L EL V+ NRL +LP+++G   ++  + +  N ++ LP++   L  L  
Sbjct: 363 SLPNSLGQLQQLEELIVNNNRLSSLPKSLGNCQSIRKIELINNQLRTLPSSFGQLEKLEV 422

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N L+++P+SL    +L  +++ NN   LRALP  IG L+ L+ LDIS   I+ LP
Sbjct: 423 LLLRGNRLQALPDSLSGLRSLEWLDLSNN-NRLRALPEDIGRLDQLKNLDISGTGIKHLP 481

Query: 342 DSFRMLSRLRVLRVQE 357
            S   L  L  L + +
Sbjct: 482 KSIENLYSLEFLVIHK 497



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 149/274 (54%), Gaps = 8/274 (2%)

Query: 97  LQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD 156
           L+N ++     LP  + +L SL  L +  N  + +  +I  LS L++L    + +  L  
Sbjct: 163 LENLILSGCSTLPWPLYQLKSLKKLSIELNTEITLSRSINQLSQLEELSWTYSSLERLDG 222

Query: 157 SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
           ++     L  L+L  N +++LP  +     L EL L  NNL +LP +IG   +L++LI++
Sbjct: 223 NMAIFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSENNLETLPKAIGQCQALEQLIIQ 282

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N L  LP ++GQ   L+ L +  N+L+ LP  + +   L +L +  N ++QLP  + +L
Sbjct: 283 DNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPEEIGNL 342

Query: 277 SSLRELDVS------FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             L+ L++        N+L S+P SL     L ++ + NN   L +LP+S+GN + + ++
Sbjct: 343 KQLKVLNLGEDPLSEGNQLVSLPNSLGQLQQLEELIVNNN--RLSSLPKSLGNCQSIRKI 400

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           ++ NNQ+R LP SF  L +L VL ++ N L+  P
Sbjct: 401 ELINNQLRTLPSSFGQLEKLEVLLLRGNRLQALP 434



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 117/241 (48%), Gaps = 29/241 (12%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  IG L +LK L L+ N   ++   IG L  L  L L  NQ      A+ +L +LE L 
Sbjct: 110 PKEIGQLKNLKYLQLNLNG--DMGAEIGQLQELQTLQLWQNQGGRFSSAIRKLPKLENLI 167

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  +  S+LP  +  L SLKKL +E N    L  +I Q S L EL   Y+ L+ L   + 
Sbjct: 168 L--SGCSTLPWPLYQLKSLKKLSIELNTEITLSRSINQLSQLEELSWTYSSLERLDGNMA 225

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
               L+ L++  N++  LP T+ +  +LREL +S N LE+                    
Sbjct: 226 IFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSENNLET-------------------- 265

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
                LP++IG  + LE+L I +N +  LP+S   L +L+ L +Q N LE  P  +++  
Sbjct: 266 -----LPKAIGQCQALEQLIIQDNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQAE 320

Query: 372 A 372
           A
Sbjct: 321 A 321



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/74 (45%), Positives = 44/74 (59%), Gaps = 1/74 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSEN-RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + ++ LPDS+  L SL  LDLS N R+ A+P  IG L  LK LD+    I  LP SI +L
Sbjct: 428 NRLQALPDSLSGLRSLEWLDLSNNNRLRALPEDIGRLDQLKNLDISGTGIKHLPKSIENL 487

Query: 162 LSLVYLDLRGNQIS 175
            SL +L +   QIS
Sbjct: 488 YSLEFLVIHKGQIS 501


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/289 (37%), Positives = 154/289 (53%), Gaps = 27/289 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN---RIIE--- 153
           L DN I+ LP  I   + LV LD+S N I+ +P +I    +L+  D   N   R+ E   
Sbjct: 66  LSDNEIQRLPGDIANFNQLVELDISRNDIMELPESISYCKTLQVADFSGNPLTRLPESFP 125

Query: 154 -----------------LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                            LPD+IG+L +LV L+LR N ++ LP +LS+L +LEELD+GSN 
Sbjct: 126 ELRNLACLSINDISLQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L +LP++IG L+SLK L ++ N L ++P  +G   SL  L V  N+L+ LPE +G + +L
Sbjct: 186 LYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N I  LP  +  L  L  L    N L  +PES+    +L ++ +  N   L  
Sbjct: 246 TDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTEN--QLVN 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           LPRSIG L+ L   +   N++  LP        L VL V+EN L  +PP
Sbjct: 304 LPRSIGKLKKLSNFNCDRNRLASLPKEIGGCCSLNVLCVRENRLMRIPP 352



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 142/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LPD+IG L +LVSL+L EN +  +P ++  L  L++LD+ +N +  LP++IG L+SL
Sbjct: 140 LQALPDNIGNLCNLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S +P  +  +  L  LD+  N L  LP+ +G+L+SL  L+V  N ++ LP
Sbjct: 200 KDLWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+ D NRL  LPE++G   +L  L +  N +  LP ++  L  L   + 
Sbjct: 260 EGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNC 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L S+P+ +    +L  + +  N   L  +P  +     L  LD+S N++  LP + 
Sbjct: 320 DRNRLASLPKEIGGCCSLNVLCVREN--RLMRIPPELSQASELHVLDLSGNRLLYLPLTL 377

Query: 345 RMLSRLRVLRVQEN 358
             L RL+ L + EN
Sbjct: 378 TSL-RLKALWLSEN 390



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 96/269 (35%), Positives = 139/269 (51%), Gaps = 6/269 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP     L+ L  L LS+N I  +P  I   + L +LD+  N I+ELP+SI
Sbjct: 46  NQLRD----LPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESI 101

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
               +L   D  GN ++ LP +   L  L  L +   +L +LPD+IG+L +L  L +  N
Sbjct: 102 SYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELREN 161

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP ++ Q   L EL V  N L  LPE +G + +L+ L +  N +  +P  + S+ S
Sbjct: 162 LLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRS 221

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  LDVS N+LE +PE +    +L  + +  N  DL  LP  IG L+ L  L    N++ 
Sbjct: 222 LTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDL--LPEGIGKLKRLSILKADQNRLV 279

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LP+S      L  L + EN L   PR+I
Sbjct: 280 QLPESIGHCESLTELVLTENQLVNLPRSI 308



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 130/240 (54%), Gaps = 4/240 (1%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            SL++L L AN++ +LP    +L  L  L L  N+I  LP  ++   +L ELD+  N++ 
Sbjct: 36  GSLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIM 95

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP+SI    +L+      N L  LP +  +  +L  L ++   L+ALP+ +G +  L  
Sbjct: 96  ELPESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVS 155

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRAL 317
           L +R N +  LP ++S L  L ELDV  NEL ++PE++    +L  + + GN  +D+   
Sbjct: 156 LELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDI--- 212

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P  +G++  L  LD+S N++  LP+    L  L  L V +N +++ P  I ++   ++++
Sbjct: 213 PAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILK 272



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 104/205 (50%), Gaps = 13/205 (6%)

Query: 47  LQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLIKLASLIEVSSKKGTRDLNL-QNKLM 102
           L +GS    N +P  I C+  +     DG +LS I      EV S +    L++ +NKL 
Sbjct: 179 LDVGSNELYN-LPETIGCLVSLKDLWLDGNQLSDIP----AEVGSMRSLTCLDVSENKL- 232

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
              E LP+ +G L SL  L +S+N I  +P  IG L  L  L    NR+++LP+SIG   
Sbjct: 233 ---ERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLKRLSILKADQNRLVQLPESIGHCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L   +   N L+SLP  IG   SL  L V  N L  
Sbjct: 290 SLTELVLTENQLVNLPRSIGKLKKLSNFNCDRNRLASLPKEIGGCCSLNVLCVRENRLMR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q S L  L +  NRL  LP
Sbjct: 350 IPPELSQASELHVLDLSGNRLLYLP 374



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 102/199 (51%), Gaps = 2/199 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N L  LP    +L  L+KL +  N+++ LP  I   + L EL +  N +  L
Sbjct: 38  LEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMEL 97

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE++    TL+V     N + +LP +   L +L  L ++   L+++P+++     LV + 
Sbjct: 98  PESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLE 157

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L  LP S+  L+ LEELD+ +N++  LP++   L  L+ L +  N L   P  
Sbjct: 158 LRENL--LTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAE 215

Query: 367 IVEMGAQAVVQYMADLVEK 385
           +  M +   +    + +E+
Sbjct: 216 VGSMRSLTCLDVSENKLER 234


>gi|209156068|gb|ACI34266.1| Leucine-rich repeat-containing protein 40 [Salmo salar]
          Length = 447

 Score =  144 bits (363), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 164/278 (58%), Gaps = 5/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E L + +  L +L  LD+ +N++ ++P +IG L  L+KL L  N++ ELP  +  L 
Sbjct: 91  NKLEALSEDVKLLPALTVLDVHDNQLTSLPTSIGELQHLQKLSLSHNKLKELPKEVWSLK 150

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N +  LP  +  L  L+++DL +N L+++PDS+G+L  L KL +  N L+ 
Sbjct: 151 NLTCLQLQQNLLEHLPEGVGLLTNLDDIDLSNNQLTAVPDSLGNLNHLVKLNLSHNKLKS 210

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    +LR L   +N+L+++P  + ++ +LE L +R+N ++ LP   S  S L+EL
Sbjct: 211 LPSGISVMKNLRLLDCTHNQLESIPPVLSQMASLEQLYLRHNKLRFLPELPS--SRLKEL 268

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L   +TL  + + +N   ++ LP  I  L+ LE LD+ NN I  LP
Sbjct: 269 HVGNNQIEVLEAEHLKHLSTLSVLELRDN--KVKTLPEEIELLQGLERLDLVNNDISSLP 326

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +  +L +L++L ++ NPL    R+++  G   +++Y+
Sbjct: 327 AALALLPKLKILTLEGNPLRGIRRDLLTKGTNELLKYL 364



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 61/255 (23%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           D++L N   + +  +PDS+G L+ LV L+LS N++ ++P+ I  + +L+ LD   N++  
Sbjct: 177 DIDLSN---NQLTAVPDSLGNLNHLVKLNLSHNKLKSLPSGISVMKNLRLLDCTHNQLES 233

Query: 154 LP---------------------------------------------DSIGDLLSLVYLD 168
           +P                                             + +  L +L  L+
Sbjct: 234 IPPVLSQMASLEQLYLRHNKLRFLPELPSSRLKELHVGNNQIEVLEAEHLKHLSTLSVLE 293

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH--- 225
           LR N++  LP  +  L  LE LDL +N++SSLP ++  L  LK L +E N L  +     
Sbjct: 294 LRDNKVKTLPEEIELLQGLERLDLVNNDISSLPAALALLPKLKILTLEGNPLRGIRRDLL 353

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           T G    L+ LR    R+K  P+  G +  T   L        Q    + ++ +L+ LD 
Sbjct: 354 TKGTNELLKYLR---GRIKEDPDGKGDEPDTAMTLP------SQAKINVHTIKTLKILDY 404

Query: 285 SFNELESVPESLCFA 299
           S  ++  VP+ +  A
Sbjct: 405 SEKQMACVPDDVFDA 419


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N+    P  I  L SL  L
Sbjct: 42  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKL 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L   P  I
Sbjct: 102 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEI 161

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 162 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 222 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 279

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 280 KNLKMLSLDANQLTALPKEI 299



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 5/255 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    L L N   + +  LP  IG+L +L  L+L  N++  +   I  L +L+KL
Sbjct: 91  EIEQLKSLHKLYLSN---NQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 147

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++   P  IG L +L  L L  NQ++  P  + +L  L+EL L +N L++ P  I
Sbjct: 148 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 207

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  +P+ IG+   L+EL +D N+L  +P+ +G++  L+VL + YN
Sbjct: 208 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 267

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +P     L +L+ L +  N+L ++P+ +     L  +N+  N   L  +P+ IG L
Sbjct: 268 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN--QLITIPKEIGQL 325

Query: 325 EMLEELDISNNQIRV 339
           + L+ L + NNQ  +
Sbjct: 326 QNLQTLYLRNNQFSI 340



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 136/250 (54%), Gaps = 5/250 (2%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++ A+P  IG L +L+ LDL  N++I LP  I  L +L  L L  NQ    P  + 
Sbjct: 34  LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIE 93

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L +L L +N L+ LP  IG L +L++L +  N L+ +   I Q  +L++L +D N+
Sbjct: 94  QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQ 153

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L A P+ +GK+  L+ L +  N +   P  +  L +L+EL +S N+L + P+ +     L
Sbjct: 154 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKL 213

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + +G+N   L  +P  IG L+ L+EL++  NQ+  +P     L  L+VL +  N  + 
Sbjct: 214 QWLGLGDN--QLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKT 271

Query: 363 PPRNIVEMGA 372
            P   VE G 
Sbjct: 272 IP---VEFGQ 278



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 110/215 (51%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +  + L +  L L   ++ ALP  + +L  L+ LDL  N L  LP  I  L +L++
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N  +  P  I Q  SL +L +  N+L  LP  +G++  L+ L++  N +K +   
Sbjct: 78  LFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKE 137

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +  N+L + P+ +     L  + + NN   L   P+ IG L+ L+EL +
Sbjct: 138 IEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYL 195

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNNQ+   P     L +L+ L + +N L   P  I
Sbjct: 196 SNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230


>gi|196010173|ref|XP_002114951.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
 gi|190582334|gb|EDV22407.1| hypothetical protein TRIADDRAFT_28844 [Trichoplax adhaerens]
          Length = 426

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 147/251 (58%), Gaps = 3/251 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD IG L +L  L+  EN I  +P +I  L+ L++LDL AN I ELPDS+G LL L  L
Sbjct: 141 LPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGSLLHLKEL 200

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQI  LP ++ RL  LE +DL  N + SLPD IG++ +L  L++ +N L+ LP +I
Sbjct: 201 LLDTNQIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRNLTDLLLSSNLLQFLPSSI 260

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L  L++D NR++ +   +G + +L  L +  N +KQLP T+  L  +  L+   N
Sbjct: 261 GKLRNLSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQLPGTIGKLGKMNNLNADKN 320

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  +   T L  +++ +N  D   LP  IG L+ L  LD+  N++  LP +   L
Sbjct: 321 FLTSIPSEIGNCTNLTVLSLRDNHLD--HLPSQIGKLKKLTVLDVCGNRLESLPITVAQL 378

Query: 348 SRLRVLRVQEN 358
           + ++ + + EN
Sbjct: 379 N-VKAIWLSEN 388



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 114/348 (32%), Positives = 186/348 (53%), Gaps = 34/348 (9%)

Query: 84  IEVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           +E+SS     +LNL QN++ D    +P++I    SL +L+LS N +  +P +I  L +L 
Sbjct: 74  MEISSLTKLVELNLRQNEIYD----IPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLT 129

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L L+   I+ELPD IG L++L  L+ R N I  LP ++  L  LE LDLG+N +  LPD
Sbjct: 130 YLMLNDISIVELPDDIGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPD 189

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLR-----------------------ELRVD 239
           S+GSL+ LK+L+++TN +++LP +IG+ S+L                        +L + 
Sbjct: 190 SLGSLLHLKELLLDTNQIKKLPTSIGRLSNLESIDLSENCVESLPDEIGNVRNLTDLLLS 249

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N L+ LP ++GK+  L +L +  N I+++  T+  L SL EL ++ N L+ +P ++   
Sbjct: 250 SNLLQFLPSSIGKLRNLSMLKLDINRIEEISATIGGLMSLTELVLTENCLKQLPGTIGKL 309

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             +  +N   NF  L ++P  IGN   L  L + +N +  LP     L +L VL V  N 
Sbjct: 310 GKMNNLNADKNF--LTSIPSEIGNCTNLTVLSLRDNHLDHLPSQIGKLKKLTVLDVCGNR 367

Query: 360 LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP--VKQKKSWVEMCFF 405
           LE  P  + ++  +A+  ++++   K   K  P  +   K+ V  CF 
Sbjct: 368 LESLPITVAQLNVKAI--WLSENQSKPSVKLLPETLSDGKTEVLTCFL 413



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/269 (32%), Positives = 147/269 (54%), Gaps = 2/269 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP    +L  L +L L +N I  +P  I  L+ L +L+L  N I ++P++I    
Sbjct: 44  NQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEISSLTKLVELNLRQNEIYDIPEAIRFCR 103

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L+L  N +  LP ++++L  L  L L   ++  LPD IGSL++L  L    N ++ 
Sbjct: 104 SLNTLNLSSNPVERLPDSITQLRNLTYLMLNDISIVELPDDIGSLVNLTVLEARENYIKV 163

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +I + + L  L +  N ++ LP+++G +  L+ L +  N IK+LPT++  LS+L  +
Sbjct: 164 LPKSICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDTNQIKKLPTSIGRLSNLESI 223

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N +ES+P+ +     L  + + +N   L+ LP SIG L  L  L +  N+I  +  
Sbjct: 224 DLSENCVESLPDEIGNVRNLTDLLLSSNL--LQFLPSSIGKLRNLSMLKLDINRIEEISA 281

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           +   L  L  L + EN L+  P  I ++G
Sbjct: 282 TIGGLMSLTELVLTENCLKQLPGTIGKLG 310



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 87/255 (34%), Positives = 138/255 (54%), Gaps = 3/255 (1%)

Query: 108 LPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +PD I +L   L  L+L  N+I  +P     L  L+ L L  N I  LP  I  L  LV 
Sbjct: 25  VPDQIYRLHRCLEELNLDANQIQELPPQFFRLLKLRNLSLEDNEIKRLPMEISSLTKLVE 84

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L+LR N+I  +P A+     L  L+L SN +  LPDSI  L +L  L++    + ELP  
Sbjct: 85  LNLRQNEIYDIPEAIRFCRSLNTLNLSSNPVERLPDSITQLRNLTYLMLNDISIVELPDD 144

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IG   +L  L    N +K LP+++ ++  LE L +  N I++LP ++ SL  L+EL +  
Sbjct: 145 IGSLVNLTVLEARENYIKVLPKSICELTVLERLDLGANEIQELPDSLGSLLHLKELLLDT 204

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+++ +P S+   + L  +++  N  +  +LP  IGN+  L +L +S+N ++ LP S   
Sbjct: 205 NQIKKLPTSIGRLSNLESIDLSENCVE--SLPDEIGNVRNLTDLLLSSNLLQFLPSSIGK 262

Query: 347 LSRLRVLRVQENPLE 361
           L  L +L++  N +E
Sbjct: 263 LRNLSMLKLDINRIE 277


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 101/303 (33%), Positives = 158/303 (52%), Gaps = 27/303 (8%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +  LP  IGKL +L  L L  N++  +P  IG L +LK L L+ N++ 
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP+ IG L +L  L+L  N+++ LP  + RL  L+EL L  N L+ LP+ IG L SL+K
Sbjct: 132 TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRK 191

Query: 213 L---------------IVETNDLEEL----------PHTIGQCSSLRELRVDYNRLKALP 247
           L               I +  +L+EL          P  IGQ  +LR L +  NRL  LP
Sbjct: 192 LSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILP 251

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           + +G++  L VL +  N +  LP  ++ L +L+EL++ +N  E+ P+ +     L  +++
Sbjct: 252 KEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDL 311

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  IG L+ L++L +S NQ+  LP     L +L  L +  N L   P  I
Sbjct: 312 YQN--RLTILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEI 369

Query: 368 VEM 370
            ++
Sbjct: 370 KQL 372



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/278 (34%), Positives = 152/278 (54%), Gaps = 7/278 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + L+L N   + +  LP+ IGKL +L  L+L  NR+  +P  IG L +L++L
Sbjct: 113 EIGQLQNLKVLHLNN---NQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQEL 169

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQ--ISALPVALSRLVRLEELDLGSNNLSSLPD 202
            L  NR+  LP+ IG L SL  L L G     + LP  +++L  L+EL L  N L+ LP 
Sbjct: 170 YLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPK 229

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L +L+ L +  N L  LP  IGQ  +L  L +  N+L  LP+ + ++  L+ L++ 
Sbjct: 230 EIGQLQNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLE 289

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           YN  +  P  ++   +L+ LD+  N L  +PE +     L K+++  N   L  LP+ IG
Sbjct: 290 YNRFEAFPKEITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRN--QLTTLPKEIG 347

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ LE L + +NQ+  LP+  + L  L+ L +  NPL
Sbjct: 348 RLQKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPL 385



 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/288 (31%), Positives = 148/288 (51%), Gaps = 27/288 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L+   N++  +P  IG L +L++L L  N++  LP+ IG L +L
Sbjct: 61  LKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNL 120

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  + +L  L+EL+L  N L+ LP  IG L +L++L +  N L  LP
Sbjct: 121 KVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILP 180

Query: 225 HTIGQCSSLR-------------------------ELRVDYNRLKALPEAVGKIHTLEVL 259
             IGQ  SLR                         EL + +NRL  LP+ +G++  L +L
Sbjct: 181 EEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRIL 240

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  L +L  LD+S N+L  +P+ +     L ++N+   +    A P+
Sbjct: 241 DLYQNRLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNL--EYNRFEAFPK 298

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I   + L+ LD+  N++ +LP+    L  L+ L +  N L   P+ I
Sbjct: 299 EITQFQNLQVLDLYQNRLTILPEEIGQLQNLQKLHLSRNQLTTLPKEI 346



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 149/268 (55%), Gaps = 8/268 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS +++  +P  IG L +L+ L+   N++  LP  IG L +L  L L+ NQ++ LP  
Sbjct: 54  LDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEE 113

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L +N L++LP+ IG L +L++L +  N L  LP  IG+  +L+EL +  
Sbjct: 114 IGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSL 173

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNN--IKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           NRL  LPE +G++ +L  LS+   N     LP  ++ L +L+EL + FN L  +P+ +  
Sbjct: 174 NRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQ 233

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++  N   L  LP+ IG L+ L  LD+S NQ+ +LP     L  L+ L ++ N
Sbjct: 234 LQNLRILDLYQN--RLTILPKEIGQLKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYN 291

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             E  P+ I +     V+    DL + R
Sbjct: 292 RFEAFPKEITQFQNLQVL----DLYQNR 315



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 125/224 (55%)

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           H      L +++ +   +  LDL  +++  LP  + +L  L+ L+  +N L++LP  IG 
Sbjct: 34  HKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGK 93

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L +L++L ++ N L  LP  IGQ  +L+ L ++ N+L  LPE +GK+  L+ L++  N +
Sbjct: 94  LQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRL 153

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
             LP  +  L +L+EL +S N L  +PE +    +L K+++G        LP+ I  L+ 
Sbjct: 154 NILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQN 213

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+EL +  N++ VLP     L  LR+L + +N L + P+ I ++
Sbjct: 214 LQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQL 257


>gi|443707193|gb|ELU02905.1| hypothetical protein CAPTEDRAFT_191186 [Capitella teleta]
          Length = 488

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 156/279 (55%), Gaps = 10/279 (3%)

Query: 121 LDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           L+LS  ++ A PA +G L   L  L+L +N++ ELP  +G L+ L YL LRGNQ++ LP 
Sbjct: 145 LNLSHLQLTACPARLGFLGPQLTSLNLSSNKLTELPPEVGCLVGLKYLYLRGNQLTTLPH 204

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           +L  L  L+ LD+  N     P  +  +  L+ L +++N L  +P  I    +LRE  + 
Sbjct: 205 SLCHLNNLQALDVQHNLFDEFPSCLPHMEGLQCLRIDSNSLTSIPAVIKSLYNLREFSIA 264

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           +N++  +PE + ++  L+VL + +N +  +P+ + SL  L +LDVS+N++ ++P S+ + 
Sbjct: 265 FNQISHIPEEISQLRNLQVLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTLPSSIVWC 324

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L  +   +N   L  LP  IG+L  L+E++I  N++  LP S  ML  L+V +V  NP
Sbjct: 325 SRLNTLLANHN--RLVKLPEKIGHLFTLKEINIQCNRLSYLPASV-MLMDLKVFKVTGNP 381

Query: 360 -LEVPPRNIVEMGAQA-----VVQYMADLVEKRDAKTQP 392
            L   P+   +   QA     +++  A ++  +  + QP
Sbjct: 382 LLTSAPKANEQTCCQAWQPLKLIELSAHVIHNQQLRWQP 420



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 59/204 (28%), Positives = 104/204 (50%), Gaps = 5/204 (2%)

Query: 94  DLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
            LNL  NKL +    LP  +G L  L  L L  N++  +P ++  L++L+ LD+  N   
Sbjct: 168 SLNLSSNKLTE----LPPEVGCLVGLKYLYLRGNQLTTLPHSLCHLNNLQALDVQHNLFD 223

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           E P  +  +  L  L +  N ++++P  +  L  L E  +  N +S +P+ I  L +L+ 
Sbjct: 224 EFPSCLPHMEGLQCLRIDSNSLTSIPAVIKSLYNLREFSIAFNQISHIPEEISQLRNLQV 283

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L++  N L  +P  +G    L +L V YN++  LP ++     L  L   +N + +LP  
Sbjct: 284 LLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTLPSSIVWCSRLNTLLANHNRLVKLPEK 343

Query: 273 MSSLSSLRELDVSFNELESVPESL 296
           +  L +L+E+++  N L  +P S+
Sbjct: 344 IGHLFTLKEINIQCNRLSYLPASV 367



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 22/157 (14%)

Query: 230 CSSLRELRVDYNRL---KALPEAV------GKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           C ++R LR  Y R    + + E        GK   + + +    +IK+ PT         
Sbjct: 93  CFTVRRLRPIYPRQSYGRNIAEGTVTQYQSGKTDAISLSNCGLKSIKRSPT--------- 143

Query: 281 ELDVSFNELESVPESLCF-ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L++S  +L + P  L F    L  +N+ +N   L  LP  +G L  L+ L +  NQ+  
Sbjct: 144 DLNLSHLQLTACPARLGFLGPQLTSLNLSSN--KLTELPPEVGCLVGLKYLYLRGNQLTT 201

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM-GAQAV 375
           LP S   L+ L+ L VQ N  +  P  +  M G Q +
Sbjct: 202 LPHSLCHLNNLQALDVQHNLFDEFPSCLPHMEGLQCL 238


>gi|41282208|ref|NP_956156.2| leucine-rich repeat-containing protein 40 [Danio rerio]
 gi|37595350|gb|AAQ94561.1| hypothetical protein FLJ20331 [Danio rerio]
          Length = 601

 Score =  144 bits (363), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/284 (32%), Positives = 166/284 (58%), Gaps = 4/284 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ +PD +  L +LV LD+ +N++ ++P +IG L  L+KL L  N++ ELP  +  L 
Sbjct: 90  NKLQSIPDDVKLLPALVVLDIHDNQLSSLPDSIGDLEQLQKLILSHNKLTELPSGVWRLT 149

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N I  +P  L +LV L++LDL +N+L  +P+S+ +L +L KL +  N L+ 
Sbjct: 150 NLRCLHLQQNLIEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLKS 209

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +LR L    N+++++P  + ++ +LE L +R+N ++ LP  +    +L+EL
Sbjct: 210 LPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLP-ELPCCKTLKEL 268

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E +  E L     L  + + +N   +++LP  I  L+ LE LD++NN I  LP
Sbjct: 269 HCGNNQIEVLEAEHLKHLNALSLLELRDN--KVKSLPEEITLLQGLERLDLTNNDISSLP 326

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
                L +L+ L ++ NPL    R+++  G   +++Y+   V++
Sbjct: 327 CGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQE 370



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 150/335 (44%), Gaps = 74/335 (22%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L+LQ  L   IE +P  +G+L +L  LDLS N ++ +P ++  L +L KLDL  N++ 
Sbjct: 152 RCLHLQQNL---IEQIPRDLGQLVNLDDLDLSNNHLIDIPESLANLQNLVKLDLSCNKLK 208

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL---------------------- 190
            LP +I  + +L  LD   NQ+ ++P  L+++  LE+L                      
Sbjct: 209 SLPPAISQMKNLRMLDCSRNQMESIPPVLAQMESLEQLYLRHNKLRYLPELPCCKTLKEL 268

Query: 191 ------------------------DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
                                   +L  N + SLP+ I  L  L++L +  ND+  LP  
Sbjct: 269 HCGNNQIEVLEAEHLKHLNALSLLELRDNKVKSLPEEITLLQGLERLDLTNNDISSLPCG 328

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP---------TTMS--- 274
           +G    L+ L ++ N L+A+   +    T E+L    + +++ P         T M+   
Sbjct: 329 LGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQEPPNGGLKEEPKTAMTFQS 388

Query: 275 -------SLSSLRELDVSFNELESVPESLCFATT---LVKMNIGNNFADLRALPRSIGNL 324
                  ++ +L+ LD S  +  S+P+ +  A     +  +N   N   L A+P  I +L
Sbjct: 389 QAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANVNFSKN--QLTAVPHRIVDL 446

Query: 325 -EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            + L ++++  N++  +P  F  L +L  + ++ N
Sbjct: 447 KDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNN 481



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 148/348 (42%), Gaps = 51/348 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           KL  L E+   K  ++L+  N  ++ +E   + +  L++L  L+L +N++ ++P  I  L
Sbjct: 252 KLRYLPELPCCKTLKELHCGNNQIEVLE--AEHLKHLNALSLLELRDNKVKSLPEEITLL 309

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL--------------------- 177
             L++LDL  N I  LP  +G L  L  L L GN + A+                     
Sbjct: 310 QGLERLDLTNNDISSLPCGLGTLPKLKSLSLEGNPLRAIRRDLLTKGTGELLKYLRSRVQ 369

Query: 178 ---------------------PVALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKKL 213
                                 + +  +  L+ LD      +S+PD +   +    +  +
Sbjct: 370 EPPNGGLKEEPKTAMTFQSQAKINIHAIKTLKTLDYSEKQDASIPDDVLDAVDGNPVANV 429

Query: 214 IVETNDLEELPHTIGQC-SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
               N L  +PH I     +L ++ + +N+L  +P     +  L  + +R N +  LP  
Sbjct: 430 NFSKNQLTAVPHRIVDLKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPME 489

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-FADLRALPRSIGNLEMLEELD 331
           +  L  LR + +SFN  +S PE L    +L  + I +N    + A+   +  L  L  LD
Sbjct: 490 LEGLIKLRSVILSFNRFKSFPEVLYRIPSLETILISSNQVGGIDAV--QMKTLSRLSTLD 547

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +SNN I  +P      + LR L +  NP   P   I+  G  AV++Y+
Sbjct: 548 LSNNDIMQVPPELGNCTSLRALMLDGNPFRNPRAAILIKGTDAVLEYL 595



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 100/213 (46%), Gaps = 39/213 (18%)

Query: 78  IKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           IK    ++ S K+   D ++ + ++D ++  P        + +++ S+N++ AVP  I  
Sbjct: 397 IKTLKTLDYSEKQ---DASIPDDVLDAVDGNP--------VANVNFSKNQLTAVPHRIVD 445

Query: 138 L-SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
           L  +L  ++L  N++  +P     L  L+++DLR N + +LP+ L  L++L  + L  N 
Sbjct: 446 LKDTLADINLGFNKLTTIPADFCHLKQLMHIDLRNNLLISLPMELEGLIKLRSVILSFNR 505

Query: 197 LSSLPDSIGSLISLKKLIVET------------------------NDLEELPHTIGQCSS 232
             S P+ +  + SL+ +++ +                        ND+ ++P  +G C+S
Sbjct: 506 FKSFPEVLYRIPSLETILISSNQVGGIDAVQMKTLSRLSTLDLSNNDIMQVPPELGNCTS 565

Query: 233 LRELRVDYNRLKALPEAV---GKIHTLEVLSVR 262
           LR L +D N  +    A+   G    LE L  R
Sbjct: 566 LRALMLDGNPFRNPRAAILIKGTDAVLEYLRSR 598


>gi|395530453|ref|XP_003767309.1| PREDICTED: leucine-rich repeat-containing protein 40 [Sarcophilus
           harrisii]
          Length = 638

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 175/310 (56%), Gaps = 9/310 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N + ++P  IG L +L+KL++  N++  LP  +  L 
Sbjct: 128 NKLQSLSDDLRLLPALTILDMHDNLLTSLPCAIGELENLQKLNVSHNKLKTLPQELTKLR 187

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L +LE+LDL +N+L++LP S  SL +L +L + +N +++
Sbjct: 188 NLKGLFLQYNELTCVPEGFGQLHKLEDLDLSNNHLTALPVSFSSLSNLMRLNLASNQMKD 247

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L    N L+ +P  +  + +LE+L +R N ++ LP   S L  L+EL
Sbjct: 248 LPVEITRMKRLKHLDCTSNYLQTVPSELASMESLELLYLRRNKLRFLPEFPSCL-LLKEL 306

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E + PE L    ++  +++ +N   L+++P  I  L+ LE LD++NN I  LP
Sbjct: 307 HVGENQIEMLGPEHLRHLKSIHVLDLRDN--KLKSIPDEITLLQALERLDLTNNDISSLP 364

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            +   L RL+ L ++ NPL    R ++  G Q V++Y+     +   K  PV Q ++ +E
Sbjct: 365 HTLGNLPRLQFLALEGNPLRTIRRELLNKGTQEVLKYL-----RSKIKDDPVNQNEASIE 419

Query: 402 MCFFSRSNKR 411
                 S  R
Sbjct: 420 TAMTLPSQAR 429



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/327 (24%), Positives = 144/327 (44%), Gaps = 47/327 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L P+ +  L S+  LDL +N++ ++P  I  L +L++LDL  N I  LP ++G+L
Sbjct: 311 NQIEMLGPEHLRHLKSIHVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPHTLGNL 370

Query: 162 LSLVYLDLRGNQISA--------------------------------------LP----V 179
             L +L L GN +                                        LP    V
Sbjct: 371 PRLQFLALEGNPLRTIRRELLNKGTQEVLKYLRSKIKDDPVNQNEASIETAMTLPSQARV 430

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSLREL 236
               +  L+ LD      + +PD I   +    +  +    N L E+P  I +  ++ ++
Sbjct: 431 NAHTITALKLLDYSDKQTTLIPDEIFDAVGNNVITSVNFSKNHLNEIPKRIMELKAVCDI 490

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            + +N+L  +   +G +  L  L +R N +  LP  M +L  L+ +++SFN  ++ P  L
Sbjct: 491 NLGFNKLSCVSAELGVLQNLAHLDIRNNLLTSLPEEMEALIKLQTINLSFNRFKTFPSVL 550

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
               +L  + + NN       P  +  ++ L  LD+ NN +  +P        LR L ++
Sbjct: 551 YRVRSLETILLSNNQVG-SVDPLQLKQMDKLATLDLQNNDLLHIPPELGNCVSLRALLLE 609

Query: 357 ENPLEVPPRNIVEMGAQAVVQYMADLV 383
            NP  +P   I+  G +AV++Y+ D +
Sbjct: 610 GNPFRIPRAAILAKGTEAVLEYLRDRI 636


>gi|410901320|ref|XP_003964144.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Takifugu
           rubripes]
          Length = 524

 Score =  144 bits (363), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 159/310 (51%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I+ +P +I   ++L+  D   N +  LP++  
Sbjct: 66  LSDNEIQRLPPEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +LV L+LR N ++ LP +LS L RLEELDLG+N 
Sbjct: 126 ELRNLTCLSINDISLQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L SLPDSIG L+ LK L ++ N L E+P  +G   SL  + V  N+++ LPE +G + +L
Sbjct: 186 LYSLPDSIGHLVGLKDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N I  LP ++  L  L  L    N L  +PES+    +L ++ +  N   +++
Sbjct: 246 ADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCESLTELVLTEN--RIQS 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LPRSIG L+ L   +   NQ+  LP        L V  V+EN L   P  +    +QA  
Sbjct: 304 LPRSIGKLKRLSNFNCDRNQLTSLPKEIGGCQALNVFCVRENRLMRIPSEL----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVSGNR 369



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L++LVSL+L EN +  +P ++  L  L++LDL  N +  LPDSIG L+ L
Sbjct: 140 LQVLPENIGNLTNLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPDSIGHLVGL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ +P  +  +  L  +D+  N +  LP+ +G L+SL  L+V  N ++ LP
Sbjct: 200 KDLWLDGNQLNEIPAEMGSMKSLLCVDVSENKIQRLPEELGGLLSLADLLVSQNLIDALP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG+   L  L+ D NRL  LPE++G   +L  L +  N I+ LP ++  L  L   + 
Sbjct: 260 ESIGKLKKLSILKADQNRLTYLPESIGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNC 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +     L    +  N   L  +P  +     L  LD+S N++  LP S 
Sbjct: 320 DRNQLTSLPKEIGGCQALNVFCVREN--RLMRIPSELSQATELHVLDVSGNRLPNLPISL 377

Query: 345 RMLSRLRVLRVQEN 358
             L RL+ L +  N
Sbjct: 378 ITL-RLKALWLSVN 390



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 79/145 (54%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP+ +G L SL  L +S+N I A+P +IG L  L  L    NR+  LP+SIG+  
Sbjct: 230 NKIQRLPEELGGLLSLADLLVSQNLIDALPESIGKLKKLSILKADQNRLTYLPESIGNCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N+I +LP ++ +L RL   +   N L+SLP  IG   +L    V  N L  
Sbjct: 290 SLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKEIGGCQALNVFCVRENRLMR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPSELSQATELHVLDVSGNRLPNLP 374



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L     +LP+SIG   SL  L L+ENRI ++P +IG L  L   +   N++  LP  
Sbjct: 275 QNRLT----YLPESIGNCESLTELVLTENRIQSLPRSIGKLKRLSNFNCDRNQLTSLPKE 330

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   +L    +R N++  +P  LS+   L  LD+  N L +LP S+ +L  LK L +  
Sbjct: 331 IGGCQALNVFCVRENRLMRIPSELSQATELHVLDVSGNRLPNLPISLITL-RLKALWLSV 389

Query: 218 N 218
           N
Sbjct: 390 N 390



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +EV+  R+ ++  +P  +     SL EL +  N+L  +P+       L K+ + +N  ++
Sbjct: 14  VEVVDKRHCSLLYVPDEIYRYERSLEELLLDANQLRDLPKQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S    + L+V     NPL   P    E+
Sbjct: 72  QRLPPEIANFVQLVELDVSRNDIMEIPESISYCTALQVADFSGNPLTRLPETFPEL 127


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 22/292 (7%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  LP  +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALP 318
             L++S N+L ++   +     L  +N+ +N                     +  L  LP
Sbjct: 258 HTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILP 317

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   P+ I ++
Sbjct: 318 KEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQL 369



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 148/268 (55%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I KL +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++P  +     L  +N+  N   L  L   IG L+ L++L++ +NQ+  L  
Sbjct: 238 NLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLSIEIGKLQNLQDLNLHSNQLTTLSK 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L + P+ I ++
Sbjct: 296 EIEQLKNLQTLSLSYNRLVILPKEIGQL 323



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 135/250 (54%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+ +N   L  LP  IG L+ L  L++S NQ+  L      L  L+ L +  N L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 361 EVPPRNIVEM 370
               + I ++
Sbjct: 291 TTLSKEIEQL 300



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IG+L +L +L+L  N++  +   I  L +L+ L+L  N++  LP  IG
Sbjct: 170 LSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIG 229

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   IG L +L+ L + +N 
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQ 289

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N +  LP  +  L +L
Sbjct: 290 LTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNL 349

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
           + L +  N L + P+ +     L  + +G  N F+
Sbjct: 350 QTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 384



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 121/221 (54%), Gaps = 5/221 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +S+NQ+  LP     L  L  L + +N L   P   +E+G 
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLP---IEIGK 253



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 8/239 (3%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL       LP  I  L +L  L L  N++  LP  + +L  L+EL+L SN L+ LP  
Sbjct: 53  LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L  LP  IG+  +L+ L +  N+L  LP   GK+  L+ L++  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++ + +     L  +N+ +N   L  LP  IG 
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGK 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           L+ L  L++S+NQ+  LP     L  L  L +  N L       +E+G    +Q + DL
Sbjct: 231 LQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLS---IEIGK---LQNLQDL 283



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL +   + +  LP  IGKL +L +L+LS+N++  +P  IG L +L  L
Sbjct: 204 EIEQLKNLQTLNLSD---NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 260

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ L   + +L  L+ L L  N L  LP  I
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 320

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L +  +
Sbjct: 321 GQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380

Query: 265 N 265
           N
Sbjct: 381 N 381


>gi|124004060|ref|ZP_01688907.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990639|gb|EAY30119.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 577

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+S GKL +L  L LS  +++ +P +   L +L++L L   ++I LP+S   L++L YL
Sbjct: 149 FPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYL 208

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL G Q++ LP +  +LV LE LDL    L+ LP+S G L++L+ L +    L +LP + 
Sbjct: 209 DLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESF 268

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +   +L  LPE+ G++  L+ L +    +  LP +   L +L+ L++S  
Sbjct: 269 GELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSST 328

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PES      L ++ + N    L ALP S   L  L++L +SN Q+  LP+SF  L
Sbjct: 329 QLTALPESFGELVNLQRLYLSN--TQLTALPESFDKLVNLQDLYLSNIQLTALPESFDKL 386

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L + +  L   P + 
Sbjct: 387 VNLQHLYLSDTQLTALPESF 406



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 151/263 (57%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S G+L +L  L LS+ ++  +P + G L +L++L L   ++ +LP+S G+L++L  L
Sbjct: 241 LPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDL 300

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L   Q++ LP +  +LV L+ L+L S  L++LP+S G L++L++L +    L  LP + 
Sbjct: 301 YLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPESFGELVNLQRLYLSNTQLTALPESF 360

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L++L +   +L ALPE+  K+  L+ L +    +  LP +   L +L+ L +S  
Sbjct: 361 DKLVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDT 420

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PES      L  +N+ +    L ALP S G L  L+ L++S+ Q+  LP+SF  L
Sbjct: 421 QLTALPESFGELVNLQHLNLSS--TQLTALPESFGELVNLQHLNLSSTQLTTLPESFGEL 478

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +    L   P++  E+
Sbjct: 479 VNLQNLDLSNTQLTTLPKSFGEL 501



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/267 (33%), Positives = 152/267 (56%), Gaps = 4/267 (1%)

Query: 96  NLQNKLMDNIEW--LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+  + N +   LP+S  KL +L  L+LS  ++ A+P + G L +L++L L   ++  
Sbjct: 296 NLQDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPESFGELVNLQRLYLSNTQLTA 355

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+S   L++L  L L   Q++ALP +  +LV L+ L L    L++LP+S   L++L+ L
Sbjct: 356 LPESFDKLVNLQDLYLSNIQLTALPESFDKLVNLQHLYLSDTQLTALPESFDKLVNLQHL 415

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +    L  LP + G+  +L+ L +   +L ALPE+ G++  L+ L++    +  LP + 
Sbjct: 416 YLSDTQLTALPESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQLTTLPESF 475

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L+ LD+S  +L ++P+S      L  +++ N       LP S   L  L+ LD+S
Sbjct: 476 GELVNLQNLDLSNTQLTTLPKSFGELVNLQNLDLSN--TQFTTLPESFDELVNLKTLDLS 533

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ+R L    + +SRL+ L+++ NPL
Sbjct: 534 NNQLRSLNLCEKFVSRLQELQLEGNPL 560



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 151/277 (54%), Gaps = 4/277 (1%)

Query: 96  NLQNKLMDNIEW--LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ+  + + +   LP S  KL +L  L LS  +++ +P +   L +L+ LDL   ++  
Sbjct: 158 NLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFDKLVNLEYLDLSGTQLTT 217

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+S   L++L YLDL G Q++ LP +   LV L++L L    L+ LP+S G L++L++L
Sbjct: 218 LPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQLTDLPESFGELVNLQRL 277

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +    L +LP + G+  +L++L +   +L  LPE+  K+  L+ L++    +  LP + 
Sbjct: 278 YLSNTQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLVNLQRLNLSSTQLTALPESF 337

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L+ L +S  +L ++PES      L  + + N    L ALP S   L  L+ L +S
Sbjct: 338 GELVNLQRLYLSNTQLTALPESFDKLVNLQDLYLSN--IQLTALPESFDKLVNLQHLYLS 395

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + Q+  LP+SF  L  L+ L + +  L   P +  E+
Sbjct: 396 DTQLTALPESFDKLVNLQHLYLSDTQLTALPESFGEL 432



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 138/262 (52%), Gaps = 2/262 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           PD IGKL++L  LDLS N++  +P + G L +L+ LDL   ++   P+S  +L++L  L 
Sbjct: 81  PDGIGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPESFSELVNLERLY 140

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L   Q+   P +  +LV L+ L L S  L +LP S   L++L++L +    L  LP +  
Sbjct: 141 LSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLSNTQLITLPESFD 200

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           +  +L  L +   +L  LPE+  K+  LE L +    +  LP +   L +L++L +S  +
Sbjct: 201 KLVNLEYLDLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGELVNLQDLYLSDTQ 260

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L  +PES      L ++ + N    L  LP S G L  L++L +SN Q+  LP+SF  L 
Sbjct: 261 LTDLPESFGELVNLQRLYLSN--TQLTDLPESFGELVNLQDLYLSNTQLTDLPESFDKLV 318

Query: 349 RLRVLRVQENPLEVPPRNIVEM 370
            L+ L +    L   P +  E+
Sbjct: 319 NLQRLNLSSTQLTALPESFGEL 340



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 129/248 (52%), Gaps = 2/248 (0%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           S+D S   +  VP  IG L++L  LDL  N++  LP+S G L++L YLDL G Q++  P 
Sbjct: 69  SIDASGQGLSVVPDGIGKLNNLGGLDLSHNQLTTLPESFGKLVNLEYLDLSGAQLTTFPE 128

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           + S LV LE L L S  L + P+S G L++L+ L + +  L  LP +  +  +L  L + 
Sbjct: 129 SFSELVNLERLYLSSTQLVTFPESFGKLVNLQHLYLSSTQLITLPKSFDKLVNLERLYLS 188

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
             +L  LPE+  K+  LE L +    +  LP +   L +L  LD+S  +L  +PES    
Sbjct: 189 NTQLITLPESFDKLVNLEYLDLSGTQLTTLPESFDKLVNLEYLDLSGTQLTDLPESFGEL 248

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
             L  + + +    L  LP S G L  L+ L +SN Q+  LP+SF  L  L+ L +    
Sbjct: 249 VNLQDLYLSD--TQLTDLPESFGELVNLQRLYLSNTQLTDLPESFGELVNLQDLYLSNTQ 306

Query: 360 LEVPPRNI 367
           L   P + 
Sbjct: 307 LTDLPESF 314



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/174 (33%), Positives = 103/174 (59%), Gaps = 6/174 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEW--LPDSIGKLSSLVSLDLSENRIVAVP 132
           LS I+L +L E   K     +NLQ+  + + +   LP+S  KL +L  L LS+ ++ A+P
Sbjct: 371 LSNIQLTALPESFDKL----VNLQHLYLSDTQLTALPESFDKLVNLQHLYLSDTQLTALP 426

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
            + G L +L+ L+L + ++  LP+S G+L++L +L+L   Q++ LP +   LV L+ LDL
Sbjct: 427 ESFGELVNLQHLNLSSTQLTALPESFGELVNLQHLNLSSTQLTTLPESFGELVNLQNLDL 486

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
            +  L++LP S G L++L+ L +       LP +  +  +L+ L +  N+L++L
Sbjct: 487 SNTQLTTLPKSFGELVNLQNLDLSNTQFTTLPESFDELVNLKTLDLSNNQLRSL 540


>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
           2006001855]
          Length = 307

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 155/282 (54%), Gaps = 13/282 (4%)

Query: 58  VPIMIMCMCC--VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKL 115
           +P++I C+ C    Q  E+ +   L   ++  + K  R LNL     D +  LP  IGKL
Sbjct: 17  IPLLI-CLFCELQAQPNEEQTYRNLTKALK--NPKDVRVLNLSG---DRLTTLPKEIGKL 70

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
            +L  L LS N+  A+P  IG L +L+KLDL  N +  LP+ IG L  L  L L GNQ+ 
Sbjct: 71  RNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEEIGQLKKLQELFLDGNQLE 130

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  + ++  L++LDL  N L++LP  IG L  L+ L + +N L+ LP  IGQ   L +
Sbjct: 131 TLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTLPKEIGQLQKLPD 190

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L+ LP+ +G++  L+ L +  N +  LP     +  L+ELD+S N+L ++ + 
Sbjct: 191 LDLSGNQLETLPKEIGQLQKLQKLDLAENQLAVLP---KGIEKLKELDLSSNQLTNLSQE 247

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +     L  +N+  ++  L  LP+ IG L+ L EL +  N I
Sbjct: 248 IGKLKNLRILNL--DYNRLTTLPKEIGKLQNLRELYLHKNPI 287



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 131/224 (58%), Gaps = 5/224 (2%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  +R+  LP  IG L +L  L L GNQ  ALP  + +L  L++LDL  N L+ LP+ 
Sbjct: 53  LNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L  L++L ++ N LE LP  I +  +L++L +  N+L  LP+ +GK+H L+VL +  
Sbjct: 113 IGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNS 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +K LP  +  L  L +LD+S N+LE++P+ +     L K+++  N   L  LP+ I  
Sbjct: 173 NQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAEN--QLAVLPKGI-- 228

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            E L+ELD+S+NQ+  L      L  LR+L +  N L   P+ I
Sbjct: 229 -EKLKELDLSSNQLTNLSQEIGKLKNLRILNLDYNRLTTLPKEI 271



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 107/204 (52%), Gaps = 25/204 (12%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L+L G++++ LP  + +L  L+ L L  N   +LP  IG L +L+KL +  N+L  LP  
Sbjct: 53  LNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEE 112

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IGQ   L+EL +D N+L+ LP+ + KI  L+ L +  N +  LP  +  L  L+ L+++ 
Sbjct: 113 IGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNS 172

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L                         + LP+ IG L+ L +LD+S NQ+  LP     
Sbjct: 173 NQL-------------------------KTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQ 207

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           L +L+ L + EN L V P+ I ++
Sbjct: 208 LQKLQKLDLAENQLAVLPKGIEKL 231



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 68/147 (46%), Gaps = 25/147 (17%)

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
             +R L +  +RL  LP+ +GK+  L++L +  N  K LP  +  L +L++LD+S NEL 
Sbjct: 48  KDVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELA 107

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +PE                          IG L+ L+EL +  NQ+  LP     +  L
Sbjct: 108 ILPEE-------------------------IGQLKKLQELFLDGNQLETLPKEIEKIQNL 142

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           + L +  N L   P+ I ++    V++
Sbjct: 143 QKLDLSGNQLTNLPKEIGKLHKLQVLE 169


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/292 (33%), Positives = 156/292 (53%), Gaps = 22/292 (7%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  LP  +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALP 318
             L++S N+L ++   +     L  +N+ +N                     +  L  LP
Sbjct: 258 HTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILP 317

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   P+ I ++
Sbjct: 318 KEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQL 369



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 148/268 (55%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I KL +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++P  +     L  +N+  N   L  L   IG L+ L++L++ +NQ+  L  
Sbjct: 238 NLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLSIEIGKLQNLQDLNLHSNQLTTLSK 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L + P+ I ++
Sbjct: 296 EIEQLKNLQTLSLSYNRLVILPKEIGQL 323



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 135/250 (54%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+ +N   L  LP  IG L+ L  L++S NQ+  L      L  L+ L +  N L
Sbjct: 233 NLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQL 290

Query: 361 EVPPRNIVEM 370
               + I ++
Sbjct: 291 TTLSKEIEQL 300



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IG+L +L +L+L  N++  +   I  L +L+ L+L  N++  LP  IG
Sbjct: 170 LSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIG 229

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   IG L +L+ L + +N 
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQ 289

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N +  LP  +  L +L
Sbjct: 290 LTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNL 349

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
           + L +  N L + P+ +     L  + +G  N F+
Sbjct: 350 QTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 384



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 120/221 (54%), Gaps = 5/221 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + + +  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +S+NQ+  LP     L  L  L + +N L   P   +E+G 
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLP---IEIGK 253



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 123/239 (51%), Gaps = 8/239 (3%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL       LP  I  L +L  L L  N++  LP  + +L  L+EL+L SN L+ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L  LP  IG+  +L+ L +  N+L  LP   GK+  L+ L++  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++ + +     L  +N+ +N   L  LP  IG 
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGK 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           L+ L  L++S+NQ+  LP     L  L  L +  N L       +E+G    +Q + DL
Sbjct: 231 LQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLS---IEIGK---LQNLQDL 283



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL +   + +  LP  IGKL +L +L+LS+N++  +P  IG L +L  L
Sbjct: 204 EIEQLKNLQTLNLSD---NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 260

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ L   + +L  L+ L L  N L  LP  I
Sbjct: 261 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 320

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L +  +
Sbjct: 321 GQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 380

Query: 265 N 265
           N
Sbjct: 381 N 381


>gi|260801165|ref|XP_002595466.1| hypothetical protein BRAFLDRAFT_118982 [Branchiostoma floridae]
 gi|229280713|gb|EEN51478.1| hypothetical protein BRAFLDRAFT_118982 [Branchiostoma floridae]
          Length = 999

 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 144/281 (51%), Gaps = 5/281 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L +S G  S   SLDLS   + A+P  +G ++ L  LD+  NR+   P S   L +L  L
Sbjct: 15  LKESDGVGSGRWSLDLSGQYLAALPPELGDITELVVLDVSRNRLESFPASTSQLSALAEL 74

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +   N +  +P  + ++  L  L+L  N L+SLPD +  L  L++L+++ N L  LP  I
Sbjct: 75  NAAHNILVQVPPEVHQMSMLACLNLSCNRLTSLPDEVTQLGLLRRLVLDMNKLTTLPEGI 134

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q SSL EL V  N L  LPE + K+  L+ L    N +   P  +  LS L EL ++ N
Sbjct: 135 SQLSSLEELNVGGNNLSYLPEGISKLTKLKRLCADSNVLTAFPGQVLQLSGLEELLLNHN 194

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  + ++L   T L  + +     + + LP S+  L  LEELD+ NNQ+  LP     L
Sbjct: 195 RLSDLTDNLGQMTGLKTLRL-----NRQTLPDSVLRLSQLEELDVQNNQLGALPLGVGTL 249

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
            RL  L V  NPL  PP ++  MG +A+ +Y  DL     A
Sbjct: 250 PRLATLHVSNNPLVQPPPSVCGMGIEAIRRYQDDLASATTA 290



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 102/224 (45%), Gaps = 38/224 (16%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M+ +  LP+ I +LSSL  L++  N +  +P  I  L+ LK+L           DS    
Sbjct: 124 MNKLTTLPEGISQLSSLEELNVGGNNLSYLPEGISKLTKLKRL---------CADS---- 170

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
                     N ++A P  + +L  LEEL L  N LS L D++G +  LK L +   + +
Sbjct: 171 ----------NVLTAFPGQVLQLSGLEELLLNHNRLSDLTDNLGQMTGLKTLRL---NRQ 217

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL---SS 278
            LP ++ + S L EL V  N+L ALP  VG +  L  L V  N + Q P ++  +   + 
Sbjct: 218 TLPDSVLRLSQLEELDVQNNQLGALPLGVGTLPRLATLHVSNNPLVQPPPSVCGMGIEAI 277

Query: 279 LRELDVSFNELESVPESLCFA---------TTLVKMNIGNNFAD 313
            R  D   +   +VP  L            +TLV+  IG N  +
Sbjct: 278 RRYQDDLASATTAVPHRLKVVLVGPAGGGKSTLVRALIGGNHKN 321


>gi|432855257|ref|XP_004068131.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Oryzias
           latipes]
          Length = 1635

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/257 (36%), Positives = 143/257 (55%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G LS L+ L+L  N +  +P SI  L  L
Sbjct: 162 ITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQL 221

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L ++  L+EL L +N+L ++P SIG L  L+ L +  N +E L 
Sbjct: 222 ERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLD 281

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ SLS L E D 
Sbjct: 282 SDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPHTIGSLSLLEEFDC 341

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L       NF  L  LPR IGN   +  + + +N++  LPD  
Sbjct: 342 SCNELESLPPTIGYLHSLRTFAADENF--LTELPREIGNCRNVTVMSLRSNKLEFLPDEI 399

Query: 345 RMLSRLRVLRVQENPLE 361
             +++LRVL + +N L+
Sbjct: 400 GQMTKLRVLNLSDNRLK 416



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N I   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 119 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 178

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L ++P SI  L  L++L + +N+  E+P  +
Sbjct: 179 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVL 238

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+EL +D N L+ +P ++GK+  L  L +  N I+ L + +S   +L +L +S N
Sbjct: 239 EQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSN 298

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L +LP +IG+L +LEE D S N++  LP +   L
Sbjct: 299 MLQHLPDSIGMLKKLTTLKVDDN--QLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYL 356

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR     EN L   PR I
Sbjct: 357 HSLRTFAADENFLTELPREI 376



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/302 (33%), Positives = 156/302 (51%), Gaps = 35/302 (11%)

Query: 66  CCVGQDGEKLSLIKLASLIEVSS--KKGTRDLNLQNKLMDN--IEWLPDSIGKLSSLVSL 121
           CC G     LS+++ AS+  ++      T+ LNL    +++  +E+LP + G+LS L  L
Sbjct: 148 CCKG-----LSVVE-ASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRIL 201

Query: 122 DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD-----------------------SI 158
           +L EN +  +P +I  L+ L++LDL +N   E+P+                       SI
Sbjct: 202 ELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSI 261

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L  L YLDL  N+I  L   +S    LE+L L SN L  LPDSIG L  L  L V+ N
Sbjct: 262 GKLRQLRYLDLAKNRIETLDSDVSGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDN 321

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LPHTIG  S L E     N L++LP  +G +H+L   +   N + +LP  + +  +
Sbjct: 322 QLTSLPHTIGSLSLLEEFDCSCNELESLPPTIGYLHSLRTFAADENFLTELPREIGNCRN 381

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           +  + +  N+LE +P+ +   T L  +N+ +N   L+ LP +   L+ L  L +S+NQ +
Sbjct: 382 VTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNR--LKNLPFTFTKLKDLAALWLSDNQSK 439

Query: 339 VL 340
            L
Sbjct: 440 AL 441



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 55/184 (29%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +LKKL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 83  LEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQEF 142

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P+ +     L V+    N I +LP   + L +L +L ++   LE +P +    + L  + 
Sbjct: 143 PDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILE 202

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ +P+SI  L  LE LD+ +N+   +P+    +  L+ L +  N L+  P +
Sbjct: 203 LRENH--LKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGS 260

Query: 367 IVEM 370
           I ++
Sbjct: 261 IGKL 264



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 73/147 (49%), Gaps = 3/147 (2%)

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELD 283
           H+  QC  +   R    RL       G+   + VL   + +++Q+P  + S   +L EL 
Sbjct: 28  HSSVQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQQVPKEIFSFERTLEELY 87

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +  N++E +P+ L     L K+++ +N  DL  LP +I +L  L+ELDIS N I+  PD+
Sbjct: 88  LDANQIEELPKQLFNCQALKKLSMPDN--DLSNLPTTIASLVNLKELDISKNGIQEFPDN 145

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +    L V+    NP+   P    ++
Sbjct: 146 IKCCKGLSVVEASVNPITKLPDGFTQL 172


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL+ N+   +P  IG L +L++L+L  N++  LP  IG L +L  L
Sbjct: 63  LPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++  P  + +L  L++L+L  N L++L   IG L SL+KL ++ N L+ LP+ I
Sbjct: 123 ILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LPE +G++  L+ L +  N +  LP  +  L +L+ L    N
Sbjct: 183 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P+ +     L  + + +N   L  LP+ IG LE L+EL +++NQ+  LP     L
Sbjct: 243 ELTILPQEIGQLQKLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+      N L + P+ I ++
Sbjct: 301 KNLQTFISFNNQLTMLPQEIGQL 323



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/253 (36%), Positives = 145/253 (57%), Gaps = 5/253 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL N  + N   LP  IG+L +L +L LS NR+   P  IG L +L+KL
Sbjct: 89  EIGQLQNLQELNLWNNQLKN---LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L SL  L+L  N++ ALP  + +L  L+EL L +N L+ LP+ I
Sbjct: 146 NLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ LI+  N L  LP  IGQ  +L+ L    N L  LP+ +G++  L+ L + +N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+EL ++ N+L ++P+ +     L      NN   L  LP+ IG L
Sbjct: 266 QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN--QLTMLPQEIGQL 323

Query: 325 EMLEELDISNNQI 337
           + L+ L ++NNQ+
Sbjct: 324 QNLQWLKLNNNQL 336



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 125/227 (55%), Gaps = 5/227 (2%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L++ YN +  L   
Sbjct: 99  LNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L SL++L++  N L+++P  +     L ++ + NN   L  LP  IG L+ L+ L +
Sbjct: 159 IGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN--QLTILPEEIGQLKNLQALIL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +NQ+ +LP     L  L++L    N L + P+   E+G    +QY+
Sbjct: 217 GDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ---EIGQLQKLQYL 260



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 116/211 (54%), Gaps = 3/211 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  L   IG+L SL  L+L +NR+ A+P  IG L +L++L
Sbjct: 135 EIGQLKNLQKLNLD---YNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQEL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L   +N L+ LP  I
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  LP  IGQ  +L+EL ++ N+L  LP+ +G++  L+      N
Sbjct: 252 GQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPES 295
            +  LP  +  L +L+ L ++ N+L S  E 
Sbjct: 312 QLTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 342


>gi|195110657|ref|XP_001999896.1| GI22824 [Drosophila mojavensis]
 gi|193916490|gb|EDW15357.1| GI22824 [Drosophila mojavensis]
          Length = 471

 Score =  143 bits (361), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 145/257 (56%), Gaps = 4/257 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L +L +L L+EN + ++P ++   + LK LDL  N++ E+P  I  L 
Sbjct: 166 NKIVQLPAEIGCLVNLRNLALNENSLTSLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLR 225

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   L +LV L  L L  N +  L  +IGSL++L  L V  N LE 
Sbjct: 226 SLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELGSAIGSLVNLTTLDVSHNHLEH 285

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +P+++G  + LE+L +  N +K++P T+ +L  LR L
Sbjct: 286 LPDDIGNCVNLNALDLQHNELLDIPDSIG--NNLEILILSNNMLKKIPNTIGNLRKLRIL 343

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N +E +P  +     L ++ +  N   +  LPRSIG+L  L  L +S N ++ LP+
Sbjct: 344 DLEENRIEVLPHEVGLLHELQRLILQTN--QITMLPRSIGHLSNLTHLSVSENNLQFLPE 401

Query: 343 SFRMLSRLRVLRVQENP 359
               L  L  L + +NP
Sbjct: 402 EIGSLESLENLYINQNP 418



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 84/247 (34%), Positives = 138/247 (55%), Gaps = 4/247 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS++ I  +P T+     L +L L++N+I++LP  IG L++L  L L  N +++LP +
Sbjct: 138 LDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTSLPES 197

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L    +L+ LDL  N L+ +P  I  L SL  L +  N +  +   + Q  +L  L +  
Sbjct: 198 LRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRE 257

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++K L  A+G +  L  L V +N+++ LP  + +  +L  LD+  NEL  +P+S+    
Sbjct: 258 NKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNELLDIPDSI--GN 315

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + NN   L+ +P +IGNL  L  LD+  N+I VLP    +L  L+ L +Q N +
Sbjct: 316 NLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIEVLPHEVGLLHELQRLILQTNQI 373

Query: 361 EVPPRNI 367
            + PR+I
Sbjct: 374 TMLPRSI 380



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 133/227 (58%), Gaps = 4/227 (1%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           +K LDL  + I  LP ++ + + L  L L  N+I  LP  +  LV L  L L  N+L+SL
Sbjct: 135 IKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLTSL 194

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P+S+ +   LK L +  N L E+P  I Q  SL  L + +NR+ A+ + + ++  L +LS
Sbjct: 195 PESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTMLS 254

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +R N IK+L + + SL +L  LDVS N LE +P+ +     L  +++ +N  +L  +P S
Sbjct: 255 LRENKIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHN--ELLDIPDS 312

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           IGN   LE L +SNN ++ +P++   L +LR+L ++EN +EV P  +
Sbjct: 313 IGN--NLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEV 357



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 97/176 (55%), Gaps = 2/176 (1%)

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           +R++ LDL  ++++ LP ++   + L +L + +N + +LP  IG   +LR L ++ N L 
Sbjct: 133 IRIKLLDLSKSSITVLPTTVRECVHLTELYLYSNKIVQLPAEIGCLVNLRNLALNENSLT 192

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           +LPE++     L+VL +R+N + ++P  +  L SL  L + FN + +V + L     L  
Sbjct: 193 SLPESLRNCTQLKVLDLRHNKLAEIPPVIYQLRSLTTLYLRFNRITAVADDLRQLVNLTM 252

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +++  N   ++ L  +IG+L  L  LD+S+N +  LPD       L  L +Q N L
Sbjct: 253 LSLREN--KIKELGSAIGSLVNLTTLDVSHNHLEHLPDDIGNCVNLNALDLQHNEL 306



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 36/103 (34%), Positives = 53/103 (51%), Gaps = 1/103 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP  +G L  L  L L  N+I  +P +IG LS+L  L +  N +  LP+ IG L 
Sbjct: 348 NRIEVLPHEVGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLE 407

Query: 163 SLVYLDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           SL  L +  N  +  LP  L+    L+ L++    L ++P  I
Sbjct: 408 SLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLGTIPPEI 450


>gi|158333285|ref|YP_001514457.1| hypothetical protein AM1_0055 [Acaryochloris marina MBIC11017]
 gi|158303526|gb|ABW25143.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 407

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 143/274 (52%), Gaps = 6/274 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           +N+LM     LP S+G+L+ L +LDL+ N +  +   +G L+ L+ LDL  N ++ELP+ 
Sbjct: 52  ENELMR----LPKSLGQLTQLQTLDLARNHLPILTEVLGDLTQLRSLDLMGNALVELPEF 107

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG    L  L+L  NQ+  +P ++ +L  L+EL L  N ++  P  +G L  L+ L + +
Sbjct: 108 IGAFSQLRSLNLVSNQLVHIPPSIGKLKNLQELQLSYNPIARWPKELGWLTGLRSLEIAS 167

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             L E+P        L  L + +N L+ LPE +G    L  L + +N +K+LP T+ S  
Sbjct: 168 TGLNEIPPDWKSLQGLESLNLSFNHLQTLPEWLGTWTELRSLDLSFNQLKELPATLGSFI 227

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L  LD+  N+L+S+P  +C    L  +   NN   L  LP ++G L  L  L ++ N I
Sbjct: 228 QLTSLDIQSNQLQSLPPQICDLVNLTSLLAYNN--QLTHLPEALGGLAALTTLGMAGNSI 285

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
             LP+S   L  L+ L    +P +  P  +   G
Sbjct: 286 CQLPESIGELQNLKQLIFNLDPDQPVPLQVFPAG 319



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 108/338 (31%), Positives = 166/338 (49%), Gaps = 16/338 (4%)

Query: 53  IFRNKVPIMIMCMCCVGQ----DGEKLSLIKLASLIEVSSKKGTRDLNL-QNKLMDNIEW 107
           + RN +PI+   +  + Q    D    +L++L   I   S+   R LNL  N+L+     
Sbjct: 73  LARNHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQ--LRSLNLVSNQLVH---- 126

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P SIGKL +L  L LS N I   P  +G L+ L+ L++ +  + E+P     L  L  L
Sbjct: 127 IPPSIGKLKNLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEIPPDWKSLQGLESL 186

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N +  LP  L     L  LDL  N L  LP ++GS I L  L +++N L+ LP  I
Sbjct: 187 NLSFNHLQTLPEWLGTWTELRSLDLSFNQLKELPATLGSFIQLTSLDIQSNQLQSLPPQI 246

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L  L    N+L  LPEA+G +  L  L +  N+I QLP ++  L +L++L  + +
Sbjct: 247 CDLVNLTSLLAYNNQLTHLPEALGGLAALTTLGMAGNSICQLPESIGELQNLKQLIFNLD 306

Query: 288 ELESVPESLCFATTLVKMNIGNNFA----DLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
             + VP  + F   L    +         +LR+LP  IG L  L+ L++S+N +  LP S
Sbjct: 307 PDQPVPLQV-FPAGLRGCRLLEQLTFVACELRSLPHWIGELTQLKSLNVSHNNLTDLPPS 365

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
              L  L+ L +  NPL      + E G  A+  Y+ +
Sbjct: 366 LGTLDNLKTLNLSNNPLRSELEVLWERGPNAIKSYLQN 403



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 138/261 (52%), Gaps = 2/261 (0%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           + +L  +  LDLS+  +  +P +IG LS LK L L  N ++ LP S+G L  L  LDL  
Sbjct: 16  VARLEGVTELDLSDIGLSELPESIGSLSQLKSLYLSENELMRLPKSLGQLTQLQTLDLAR 75

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N +  L   L  L +L  LDL  N L  LP+ IG+   L+ L + +N L  +P +IG+  
Sbjct: 76  NHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQLRSLNLVSNQLVHIPPSIGKLK 135

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +L+EL++ YN +   P+ +G +  L  L +    + ++P    SL  L  L++SFN L++
Sbjct: 136 NLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEIPPDWKSLQGLESLNLSFNHLQT 195

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +PE L   T L  +++  +F  L+ LP ++G+   L  LDI +NQ++ LP     L  L 
Sbjct: 196 LPEWLGTWTELRSLDL--SFNQLKELPATLGSFIQLTSLDIQSNQLQSLPPQICDLVNLT 253

Query: 352 VLRVQENPLEVPPRNIVEMGA 372
            L    N L   P  +  + A
Sbjct: 254 SLLAYNNQLTHLPEALGGLAA 274



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 107/236 (45%), Gaps = 44/236 (18%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           + ++RL  + ELDL    LS LP+SIGSL  LK L +  N+L  LP ++GQ + L+ L +
Sbjct: 14  IEVARLEGVTELDLSDIGLSELPESIGSLSQLKSLYLSENELMRLPKSLGQLTQLQTLDL 73

Query: 239 DYNRLK-----------------------ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N L                         LPE +G    L  L++  N +  +P ++  
Sbjct: 74  ARNHLPILTEVLGDLTQLRSLDLMGNALVELPEFIGAFSQLRSLNLVSNQLVHIPPSIGK 133

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGN---------------------NFADL 314
           L +L+EL +S+N +   P+ L + T L  + I +                     +F  L
Sbjct: 134 LKNLQELQLSYNPIARWPKELGWLTGLRSLEIASTGLNEIPPDWKSLQGLESLNLSFNHL 193

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  +G    L  LD+S NQ++ LP +     +L  L +Q N L+  P  I ++
Sbjct: 194 QTLPEWLGTWTELRSLDLSFNQLKELPATLGSFIQLTSLDIQSNQLQSLPPQICDL 249


>gi|427795749|gb|JAA63326.1| Putative leucine rich repeat protein, partial [Rhipicephalus
           pulchellus]
          Length = 463

 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/292 (33%), Positives = 158/292 (54%), Gaps = 10/292 (3%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            G R LNL +   ++I+ LP ++  L SL  LD+S+N ++ +P  I G   L  ++   N
Sbjct: 58  HGLRKLNLSD---NDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVN 114

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            + +LP+    LL++  L L    +  LP    RL +L+ L+L  N+L  LP S+  L  
Sbjct: 115 PVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTE 174

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +L +  ND  ELP  IG   SL EL  D NRL +LP  +G +  L  L    N I  +
Sbjct: 175 LSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFI 234

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
              + +++ L +L ++ N+L+ +PE+L F   L  + + +N   L  LP SIG L  LEE
Sbjct: 235 ADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNH--LATLPDSIGQLSKLEE 292

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPPRNIVEMGAQAVVQYMA 380
           L I++N+I  LP +  +L  L +L   +N LE +PP    E+G+ + ++ ++
Sbjct: 293 LIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPP----EIGSCSKLRVLS 340



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 143/254 (56%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+LS L  L+L EN +  +P ++  L+ L +LD+  N   ELP+ IG L SL
Sbjct: 139 LEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEVIGSLPSL 198

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L    N++++LP  +  L++L  LD   N +S + D I ++  L  L + TN L+++P
Sbjct: 199 TELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKIP 258

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G   +L  LR+D N L  LP+++G++  LE L +  N I  LP+T+  L +L  L  
Sbjct: 259 ETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMA 318

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LE +P  +   + L  +++ +N   L  +P  +G+L  L  +++S NQ+R LP S 
Sbjct: 319 DDNLLEDLPPEIGSCSKLRVLSLRDN--RLCNVPDELGHLSSLRVVNLSGNQLRHLPVSL 376

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 377 AKLGGLHALWLSQN 390



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 108/181 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L  L  LD S NRI  +   I  ++ L  L L  N++ ++P+++G L +L  L
Sbjct: 211 LPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTL 270

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP ++ +L +LEEL + SN + SLP +IG L +L  L+ + N LE+LP  I
Sbjct: 271 RLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPPEI 330

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G CS LR L +  NRL  +P+ +G + +L V+++  N ++ LP +++ L  L  L +S N
Sbjct: 331 GSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLHALWLSQN 390

Query: 288 E 288
           +
Sbjct: 391 Q 391



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 3/248 (1%)

Query: 121 LDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           LD + + +  VP+ +     +L++L L+AN+I +LP  +     L  L+L  N I  LP 
Sbjct: 16  LDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQTLPP 75

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ALS L+ LEELD+  NN+  +PD+I     L  +    N + +LP    Q  ++ +L ++
Sbjct: 76  ALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQLYLN 135

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
              L+ LP   G++  L++L +R N++K LP +M+ L+ L  LD+  N+   +PE +   
Sbjct: 136 DTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEVIGSL 195

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            +L ++   +N   L +LP  +G+L  L  LD S N+I  + D    ++ L  L +  N 
Sbjct: 196 PSLTELWCDSN--RLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNK 253

Query: 360 LEVPPRNI 367
           L+  P  +
Sbjct: 254 LQKIPETL 261



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 79/157 (50%), Gaps = 10/157 (6%)

Query: 229 QCSSLR----ELRV-DY--NRLKALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            C  LR    E+RV DY  + L+ +P E      TLE L +  N IK LP  +     LR
Sbjct: 2   HCPCLRPAREEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLR 61

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +L++S N+++++P +L    +L +++I  N  ++  +P +I   + L  ++ S N +  L
Sbjct: 62  KLNLSDNDIQTLPPALSSLISLEELDISKN--NVIEIPDNIKGCKCLSIVEASVNPVGKL 119

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+ F  L  +  L + +  LE  P N   +    +++
Sbjct: 120 PEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILE 156



 Score = 45.8 bits (107), Expect = 0.036,   Method: Compositional matrix adjust.
 Identities = 30/73 (41%), Positives = 40/73 (54%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP  IG  S L  L L +NR+  VP  +G LSSL+ ++L  N++  LP S+  L  L
Sbjct: 323 LEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGL 382

Query: 165 VYLDLRGNQISAL 177
             L L  NQ   L
Sbjct: 383 HALWLSQNQTKPL 395



 Score = 39.3 bits (90), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 58/120 (48%), Gaps = 3/120 (2%)

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  P    +   +R LD + + LE VP E   +  TL ++ +  N   ++ LPR + +  
Sbjct: 1   RHCPCLRPAREEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNAN--QIKDLPRPLFHCH 58

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
            L +L++S+N I+ LP +   L  L  L + +N +   P NI      ++V+   + V K
Sbjct: 59  GLRKLNLSDNDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGK 118


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 155/286 (54%), Gaps = 13/286 (4%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++++ K  R L+L+    + +  LP  IG+L +L SL L  N +  +P  IG L +LK+L
Sbjct: 63  QIANLKNLRKLDLR---YNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPEEIGHLKNLKEL 119

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS--------ALPVALSRLVRLEELDLGSNN 196
            L  N +I LP++IG L +L  LDL  N  S         +   +  L  L+EL+L  N 
Sbjct: 120 SLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNR 179

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L++LP  IG L SL+KL +  N L  LP  IG+  +L+ L +  NRL   P+ +GK+ +L
Sbjct: 180 LTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQSL 239

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           E L +  N++  LP  +  L +LREL +  N L ++P+ +     L ++++G N   L  
Sbjct: 240 EKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN--RLTT 297

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           LP+ IG  + L EL +  N++  LP     L  L  L + +NPL V
Sbjct: 298 LPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSV 343



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/269 (33%), Positives = 142/269 (52%), Gaps = 12/269 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L ++  K S +  L LS   I  +P  I  L +L+KLDL  N++  LP  IG L +L  L
Sbjct: 37  LREAFQKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSL 96

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL---------ISLKKLIVETN 218
            L GN +S LP  +  L  L+EL L  N L +LP++IG L         ++L+ LI  + 
Sbjct: 97  SLYGNLLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSE 156

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           ++  +   IG   +L+EL +  NRL  LP+ +GK+ +LE L +  N++  LP  +  L +
Sbjct: 157 EI-GISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+ L +  N L + P+ +    +L K+++ NN   L  LP+ IG L+ L EL +  N++ 
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQSLEKLDLSNN--SLSTLPKEIGRLKNLRELSLEGNRLS 273

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LP     L  L+ L +  N L   P+ I
Sbjct: 274 TLPKEIGRLKNLKELSLGGNRLTTLPKEI 302


>gi|260836016|ref|XP_002613003.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
 gi|229298385|gb|EEN69012.1| hypothetical protein BRAFLDRAFT_213228 [Branchiostoma floridae]
          Length = 299

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/270 (33%), Positives = 152/270 (56%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG+L +L++LD+S N +  +PA IG    +  LDL  N +++LP++IG+L 
Sbjct: 10  NKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDLPETIGNLK 69

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
            L  L LR N+++++P +LS    +EE +   NNLSSLP+  + SL+++  L +  N+  
Sbjct: 70  LLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFS 129

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  IG   Q +++  + +++N +  +P  +  +   L  L+++ N +  LP  + +  
Sbjct: 130 SYP--IGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWE 187

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           ++ EL++  N+L+ +PE +   T L  + + NN   L+ LPR IGNL ML  LD+  N++
Sbjct: 188 NMVELNLGTNQLQKLPEDIQHLTNLETLILSNNL--LKKLPRGIGNLRMLRVLDLEENRL 245

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP     L  L  L VQ N L   PR I
Sbjct: 246 ESLPTEIAYLRDLNRLVVQSNQLTTMPRAI 275



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/254 (31%), Positives = 127/254 (50%), Gaps = 28/254 (11%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L  L L  N+I ELP  IG L++L+ LD+  N +  LP  +   V++  LDL  N L  L
Sbjct: 2   LTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLDL 61

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---------- 250
           P++IG+L  L +L +  N L  +P ++  C+ + E   + N L +LPE +          
Sbjct: 62  PETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSSL 121

Query: 251 ---------------GKIHTLEVLSVRYNNIKQLP-TTMSSLSSLRELDVSFNELESVPE 294
                           +  T+  +++ +N+I ++P    S    L +L++  N+L S+P 
Sbjct: 122 TLARNNFSSYPIGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDNQLTSLPL 181

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +     +V++N+G N   L+ LP  I +L  LE L +SNN ++ LP     L  LRVL 
Sbjct: 182 DVGTWENMVELNLGTN--QLQKLPEDIQHLTNLETLILSNNLLKKLPRGIGNLRMLRVLD 239

Query: 355 VQENPLEVPPRNIV 368
           ++EN LE  P  I 
Sbjct: 240 LEENRLESLPTEIA 253



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 51/269 (18%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++E LP  IG    + SLDL  N ++ +P TIG L  L +L L  NR+  +P S+ +  
Sbjct: 33  NHLEHLPAEIGNCVQMSSLDLQHNELLDLPETIGNLKLLSRLGLRYNRLASVPKSLSNCT 92

Query: 163 SLVYLDLRGNQISALPVAL----------------------------------------- 181
            +   +  GN +S+LP  L                                         
Sbjct: 93  EMEEFNAEGNNLSSLPEGLLSSLVNMSSLTLARNNFSSYPIGGPAQFATVYSINMEHNHI 152

Query: 182 --------SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
                   SR   L +L++  N L+SLP  +G+  ++ +L + TN L++LP  I   ++L
Sbjct: 153 NKIPFGIFSRAKYLTKLNMKDNQLTSLPLDVGTWENMVELNLGTNQLQKLPEDIQHLTNL 212

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L VL +  N ++ LPT ++ L  L  L V  N+L ++P
Sbjct: 213 ETLILSNNLLKKLPRGIGNLRMLRVLDLEENRLESLPTEIAYLRDLNRLVVQSNQLTTMP 272

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIG 322
            ++   T L  + +G N  +L+ +P  IG
Sbjct: 273 RAIGHLTNLTYLGVGEN--NLQQIPEEIG 299



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/231 (29%), Positives = 101/231 (43%), Gaps = 51/231 (22%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           +L  L L  N +  LP  IG L++L  L V  N LE LP  IG C  +  L + +N L  
Sbjct: 1   KLTMLSLRENKIRELPGGIGQLVNLINLDVSHNHLEHLPAEIGNCVQMSSLDLQHNELLD 60

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC-------- 297
           LPE +G +  L  L +RYN +  +P ++S+ + + E +   N L S+PE L         
Sbjct: 61  LPETIGNLKLLSRLGLRYNRLASVPKSLSNCTEMEEFNAEGNNLSSLPEGLLSSLVNMSS 120

Query: 298 ------------------FATT-----------------------LVKMNIGNNFADLRA 316
                             FAT                        L K+N+ +N   L +
Sbjct: 121 LTLARNNFSSYPIGGPAQFATVYSINMEHNHINKIPFGIFSRAKYLTKLNMKDN--QLTS 178

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP  +G  E + EL++  NQ++ LP+  + L+ L  L +  N L+  PR I
Sbjct: 179 LPLDVGTWENMVELNLGTNQLQKLPEDIQHLTNLETLILSNNLLKKLPRGI 229


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           S+GK  +L SLD+S NR+  +P  +G L  L  L L  N + +LP+ IG L  L  L L 
Sbjct: 188 SLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLN 247

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            N+I  LP  L+ LV+L+ + L  N L  LP+ IG L  LK L +  N L  LP +IG  
Sbjct: 248 ENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNL 307

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           + L  L++  NRL+ LP ++G + +L+ + VR NN++ LP ++S L  +  +  S N++ 
Sbjct: 308 TLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQIS 367

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P  L   T L  + I  N   L  +P  +  LE L  LD S NQI  LP+    L  L
Sbjct: 368 LLPVELAELTQLKSLAISGNL--LTEIPSELWGLEELYYLDASRNQITSLPNKISDLRSL 425

Query: 351 RVLRVQENPLEVPPRNIVEM 370
           R+L +  N L   P  I  +
Sbjct: 426 RILVLSHNRLRTLPFGITRL 445



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 146/266 (54%), Gaps = 7/266 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD++G L  L SL L +N +  +P  IG LS L++L L+ N+I +LP  +  L+ L  +
Sbjct: 208 IPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVV 267

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L +L+ L L  N L +LP+SIG+L  L  L +  N LE LP ++
Sbjct: 268 KLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSL 327

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  +SL+ + V  N L+ LP+++ ++  +E +    N I  LP  ++ L+ L+ L +S N
Sbjct: 328 GNMASLKSIWVRKNNLQTLPKSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGN 387

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P  L     L  ++   N   + +LP  I +L  L  L +S+N++R LP     L
Sbjct: 388 LLTEIPSELWGLEELYYLDASRN--QITSLPNKISDLRSLRILVLSHNRLRTLPFGITRL 445

Query: 348 SRLRVLRVQENPL-EVPPRNIVEMGA 372
             LR L +  N L ++PP     MGA
Sbjct: 446 KNLRELYLDNNQLAKLPP----NMGA 467



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 85/256 (33%), Positives = 140/256 (54%), Gaps = 2/256 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP+ IG LS L  L L+EN+I  +P  +  L  L+ + L  N+++ELP+ IG L 
Sbjct: 226 NNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLS 285

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N + ALP ++  L  L  L L +N L  LP S+G++ SLK + V  N+L+ 
Sbjct: 286 QLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQT 345

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +I Q   +  +    N++  LP  + ++  L+ L++  N + ++P+ +  L  L  L
Sbjct: 346 LPKSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYL 405

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D S N++ S+P  +    +L  + + +N   LR LP  I  L+ L EL + NNQ+  LP 
Sbjct: 406 DASRNQITSLPNKISDLRSLRILVLSHN--RLRTLPFGITRLKNLRELYLDNNQLAKLPP 463

Query: 343 SFRMLSRLRVLRVQEN 358
           +   L  L++  ++ N
Sbjct: 464 NMGALLNLKIFTMKRN 479



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 136/270 (50%), Gaps = 27/270 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI+ LP  I  L SL  LD+  N +V +P  I  L +L +L++  N++ ELP++IG L 
Sbjct: 90  NNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLK 149

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            +   +  GNQ+  LP + S L +LE L LG N L S+  S+G   +L+ L +  N L +
Sbjct: 150 KMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESV--SLGKYKNLQSLDISRNRLTK 207

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +G    L  L +  N L  LPE +G +  L  L +  N IKQLP  ++SL  L+ +
Sbjct: 208 IPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVV 267

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L                           LP  IG L  L+ L + +N +R LP+
Sbjct: 268 KLEHNQL-------------------------LELPNDIGKLSQLKVLSLHHNLLRALPE 302

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           S   L+ L  L++  N LE+ P ++  M +
Sbjct: 303 SIGNLTLLPTLQLSNNRLELLPSSLGNMAS 332



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/330 (28%), Positives = 167/330 (50%), Gaps = 51/330 (15%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           + +K   + LNL ++ +  I   P +I  L +L  L+L  N++   P  +  L  LK L 
Sbjct: 30  LQNKSKVQRLNLSSQKLKKI---PQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLKILR 86

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L+ N I  LP  I  L SL  LD++ N +  LP  + RL  L +L++ +N +  LP++IG
Sbjct: 87  LYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIG 146

Query: 206 SLISLKKLIVETNDLEELPH---------------------TIGQCSSLRELRVDYNRLK 244
            L  ++      N L++LP                      ++G+  +L+ L +  NRL 
Sbjct: 147 KLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLESVSLGKYKNLQSLDISRNRLT 206

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            +P+ +G +  L  L ++ NN+ +LP  + +LS LR L ++ N+++ +P+ L   T+LV+
Sbjct: 207 KIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRRLYLNENKIKQLPKEL---TSLVQ 263

Query: 305 MNI----GNNFAD--------------------LRALPRSIGNLEMLEELDISNNQIRVL 340
           + +     N   +                    LRALP SIGNL +L  L +SNN++ +L
Sbjct: 264 LQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELL 323

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P S   ++ L+ + V++N L+  P++I ++
Sbjct: 324 PSSLGNMASLKSIWVRKNNLQTLPKSISQL 353



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 145/267 (54%), Gaps = 6/267 (2%)

Query: 113 GKLSSLVSLDLSENRIVA--VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           G+ S+     +  NR+    +   +   S +++L+L + ++ ++P +I  L +L  L+L 
Sbjct: 6   GRFSASAQKKMDINRLFYSNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLG 65

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++  P  L +L +L+ L L +NN+  LP  I SL SL+ L ++ N L +LP  I + 
Sbjct: 66  NNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRL 125

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L +L +  N++K LPE +GK+  + V     N +KQLP + SSL  L  L +  N+LE
Sbjct: 126 RNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLE 185

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           SV  SL     L  ++I  N   L  +P ++G+L+ L  L +  N +  LP+    LS+L
Sbjct: 186 SV--SLGKYKNLQSLDISRN--RLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQL 241

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           R L + EN ++  P+ +  +    VV+
Sbjct: 242 RRLYLNENKIKQLPKELTSLVQLQVVK 268



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 136/268 (50%), Gaps = 4/268 (1%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           S +  L+LS  ++  +P  I  L +L++L+L  N++   P  +  L  L  L L  N I 
Sbjct: 34  SKVQRLNLSSQKLKKIPQNIVLLKNLEELNLGNNQLTVFPKVLFQLKKLKILRLYNNNIK 93

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +  L  LE LD+  N+L  LP  I  L +L +L +  N ++ELP  IG+   +R 
Sbjct: 94  HLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRLRNLTQLNIANNKVKELPENIGKLKKMRV 153

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
                N+LK LP +   +  LE L +  N ++ +  ++    +L+ LD+S N L  +P++
Sbjct: 154 FEAYGNQLKQLPASFSSLRKLESLGLGKNQLESV--SLGKYKNLQSLDISRNRLTKIPDN 211

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L     L  + +  N  +L  LP  IG L  L  L ++ N+I+ LP     L +L+V+++
Sbjct: 212 LGSLKKLTSLFLQQN--NLTKLPEKIGALSQLRRLYLNENKIKQLPKELTSLVQLQVVKL 269

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
           + N L   P +I ++    V+    +L+
Sbjct: 270 EHNQLLELPNDIGKLSQLKVLSLHHNLL 297



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 25/129 (19%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +  L  L  LD S N+I ++P                       + I DL SL  L
Sbjct: 392 IPSELWGLEELYYLDASRNQITSLP-----------------------NKISDLRSLRIL 428

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL--EELPH 225
            L  N++  LP  ++RL  L EL L +N L+ LP ++G+L++LK   ++ N    E+  H
Sbjct: 429 VLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNLKIFTMKRNGFTNEQKAH 488

Query: 226 TIGQCSSLR 234
              Q S +R
Sbjct: 489 IRKQLSHVR 497



 Score = 41.6 bits (96), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 81/160 (50%), Gaps = 4/160 (2%)

Query: 228 GQCSSLRELRVDYNRL--KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           G+ S+  + ++D NRL    L +A+     ++ L++    +K++P  +  L +L EL++ 
Sbjct: 6   GRFSASAQKKMDINRLFYSNLDQALQNKSKVQRLNLSSQKLKKIPQNIVLLKNLEELNLG 65

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L   P+ L     L  + + NN  +++ LP+ I +L+ LE LDI  N +  LP    
Sbjct: 66  NNQLTVFPKVLFQLKKLKILRLYNN--NIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIV 123

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
            L  L  L +  N ++  P NI ++    V +   + +++
Sbjct: 124 RLRNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQ 163


>gi|384170888|ref|YP_005552265.1| hypothetical protein [Arcobacter sp. L]
 gi|345470498|dbj|BAK71948.1| conserved hypothetical protein [Arcobacter sp. L]
          Length = 332

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/268 (38%), Positives = 153/268 (57%), Gaps = 4/268 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ LP+SIG L +L  L LS NRI  +P  IG L  L+ L    N I ELP++IGDL +
Sbjct: 40  NLKDLPESIGVLKNLNVLKLSNNRIRKLPKAIGELKKLRNLQCENNLIEELPETIGDLEN 99

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+ L+L  N+I  LP    +L  L  L L SN +  L     +L  L  L +ETN+LEEL
Sbjct: 100 LMILNLNVNRIKVLPKGFYKLDSLTRLTLASNRIERLDSEFKNLSKLLYLSLETNELEEL 159

Query: 224 PHTIGQ-CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           P  I +    L  L + +N L  LP ++ KI  LE L +  N IK+LP ++ S   L +L
Sbjct: 160 PVDIFELMKQLYYLDLSFNHLNYLPSSLSKIKELETLLLEGNTIKELP-SLESHDMLLKL 218

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N LES+   +     L  + + NN   L ++P  I NL+ L  L +S+N++++LP+
Sbjct: 219 DLSDNNLESLDFDISKLEDLKILRLDNNL--LTSIPNEICNLQNLMSLSVSSNKLKILPE 276

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +   ++ L  L V++N LE  P++I E+
Sbjct: 277 NIGNINTLHELDVEDNELETLPKSIEEL 304



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 131/244 (53%), Gaps = 26/244 (10%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  R+L  +N L   IE LP++IG L +L+ L+L+ NRI  +P     L SL +L L +N
Sbjct: 75  KKLRNLQCENNL---IEELPETIGDLENLMILNLNVNRIKVLPKGFYKLDSLTRLTLASN 131

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR-LEELDLGSNNLSSLPDSIGSLI 208
           RI  L     +L  L+YL L  N++  LPV +  L++ L  LDL  N+L+ LP S+  + 
Sbjct: 132 RIERLDSEFKNLSKLLYLSLETNELEELPVDIFELMKQLYYLDLSFNHLNYLPSSLSKIK 191

Query: 209 SLKKLIVETNDLEELP----------------------HTIGQCSSLRELRVDYNRLKAL 246
            L+ L++E N ++ELP                        I +   L+ LR+D N L ++
Sbjct: 192 ELETLLLEGNTIKELPSLESHDMLLKLDLSDNNLESLDFDISKLEDLKILRLDNNLLTSI 251

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P  +  +  L  LSV  N +K LP  + ++++L ELDV  NELE++P+S+     L ++ 
Sbjct: 252 PNEICNLQNLMSLSVSSNKLKILPENIGNINTLHELDVEDNELETLPKSIEELENLKELY 311

Query: 307 IGNN 310
           I NN
Sbjct: 312 IDNN 315



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 147/272 (54%), Gaps = 28/272 (10%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP--- 155
           KL +N I  LP +IG+L  L +L    N I  +P TIG L +L  L+L+ NRI  LP   
Sbjct: 58  KLSNNRIRKLPKAIGELKKLRNLQCENNLIEELPETIGDLENLMILNLNVNRIKVLPKGF 117

Query: 156 ---DSI-----------------GDLLSLVYLDLRGNQISALPVALSRLVR-LEELDLGS 194
              DS+                  +L  L+YL L  N++  LPV +  L++ L  LDL  
Sbjct: 118 YKLDSLTRLTLASNRIERLDSEFKNLSKLLYLSLETNELEELPVDIFELMKQLYYLDLSF 177

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N+L+ LP S+  +  L+ L++E N ++ELP ++     L +L +  N L++L   + K+ 
Sbjct: 178 NHLNYLPSSLSKIKELETLLLEGNTIKELP-SLESHDMLLKLDLSDNNLESLDFDISKLE 236

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L++L +  N +  +P  + +L +L  L VS N+L+ +PE++    TL ++++ +N  +L
Sbjct: 237 DLKILRLDNNLLTSIPNEICNLQNLMSLSVSSNKLKILPENIGNINTLHELDVEDN--EL 294

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
             LP+SI  LE L+EL I NN+    P+   +
Sbjct: 295 ETLPKSIEELENLKELYIDNNKNLKKPEKLEL 326



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 103/195 (52%), Gaps = 5/195 (2%)

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            DL  L +LDL    +  LP ++  L  L  L L +N +  LP +IG L  L+ L  E N
Sbjct: 26  DDLEFLTHLDLSKRNLKDLPESIGVLKNLNVLKLSNNRIRKLPKAIGELKKLRNLQCENN 85

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            +EELP TIG   +L  L ++ NR+K LP+   K+ +L  L++  N I++L +   +LS 
Sbjct: 86  LIEELPETIGDLENLMILNLNVNRIKVLPKGFYKLDSLTRLTLASNRIERLDSEFKNLSK 145

Query: 279 LRELDVSFNELESVPESLC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           L  L +  NELE +P  +      L  +++   F  L  LP S+  ++ LE L +  N I
Sbjct: 146 LLYLSLETNELEELPVDIFELMKQLYYLDLS--FNHLNYLPSSLSKIKELETLLLEGNTI 203

Query: 338 RVLP--DSFRMLSRL 350
           + LP  +S  ML +L
Sbjct: 204 KELPSLESHDMLLKL 218



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/168 (31%), Positives = 84/168 (50%), Gaps = 15/168 (8%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
             ++DLE L H          L +    LK LPE++G +  L VL +  N I++LP  + 
Sbjct: 23  THSDDLEFLTH----------LDLSKRNLKDLPESIGVLKNLNVLKLSNNRIRKLPKAIG 72

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L  LR L    N +E +PE++     L+ +N+  N   ++ LP+    L+ L  L +++
Sbjct: 73  ELKKLRNLQCENNLIEELPETIGDLENLMILNL--NVNRIKVLPKGFYKLDSLTRLTLAS 130

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           N+I  L   F+ LS+L  L ++ N LE  P +I E+  Q    Y  DL
Sbjct: 131 NRIERLDSEFKNLSKLLYLSLETNELEELPVDIFELMKQL---YYLDL 175



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 69/130 (53%), Gaps = 3/130 (2%)

Query: 261 VRYNNIKQLPTTMSS-LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           +R N++  + +T S  L  L  LD+S   L+ +PES+     L  + + NN   +R LP+
Sbjct: 12  IRANDLTPIMSTHSDDLEFLTHLDLSKRNLKDLPESIGVLKNLNVLKLSNN--RIRKLPK 69

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +IG L+ L  L   NN I  LP++   L  L +L +  N ++V P+   ++ +   +   
Sbjct: 70  AIGELKKLRNLQCENNLIEELPETIGDLENLMILNLNVNRIKVLPKGFYKLDSLTRLTLA 129

Query: 380 ADLVEKRDAK 389
           ++ +E+ D++
Sbjct: 130 SNRIERLDSE 139


>gi|324504718|gb|ADY42033.1| Leucine-rich repeat protein soc-2 [Ascaris suum]
          Length = 587

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 163/350 (46%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG++SSL+   LS N +  +P  IG  + L +LDL  N ++ LP ++G+L 
Sbjct: 227 NKIRELPATIGQISSLLVCLLSYNHLRTIPDEIGQCTELTQLDLQHNDLVSLPSTMGNLS 286

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI------------------ 204
           +L+ L +R N++  LP  +S   +LEE  + SN L +LPD +                  
Sbjct: 287 NLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSRNELT 346

Query: 205 -------------------------------GSLISLKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  +P  +G  +++
Sbjct: 347 NFPAGGPQQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGAWTAM 406

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+L+ LP+ + K+  LEVL +  N +K+LP+ + +L  LRELD+  NEL+SVP
Sbjct: 407 TELNLSTNQLRVLPDDIDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENELDSVP 466

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             + F TTL K+ I +N   L +LPR+IGNL  L +L    N +  LP+    L  L+ L
Sbjct: 467 SEIGFVTTLTKLWIQSN--KLVSLPRTIGNLTNLTDLRAGENNLTSLPEEIGNLDSLKSL 524

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  I   G   V+QY+
Sbjct: 525 YINDNSSLHNLPFELALCASLEIMSIENCPLSQIPPEITAGGPSLVIQYL 574



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 149/309 (48%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L +L  L LSEN + ++P ++  L+ L+ LDL  N++ E+P  I  + SL  L
Sbjct: 140 LPHEIGNLVNLTKLGLSENGLTSLPDSLSALTQLETLDLRHNKLCEIPPVIYQISSLETL 199

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I ++   + RL RL+ +DL  N +  LP +IG + SL   ++  N L  +P  I
Sbjct: 200 WLRYNRIVSVGAEIGRLKRLKMIDLRENKIRELPATIGQISSLLVCLLSYNHLRTIPDEI 259

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQC+ L +L + +N L +LP  +G +  L  L +RYN ++ LP  MS+   L E  V  N
Sbjct: 260 GQCTELTQLDLQHNDLVSLPSTMGNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESN 319

Query: 288 ELESVPESL-------------------------------------------------CF 298
           +LE++P+ +                                                   
Sbjct: 320 QLEALPDGMLTSLPNLKTINLSRNELTNFPAGGPQQFASAVTINMEHNSISKIPFGIFAK 379

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           AT L K+N+  N   L ++P  +G    + EL++S NQ+RVLPD    L  L VL +  N
Sbjct: 380 ATGLTKLNLKEN--GLTSMPLDMGAWTAMTELNLSTNQLRVLPDDIDKLINLEVLVLSNN 437

Query: 359 PLEVPPRNI 367
            L+  P  I
Sbjct: 438 QLKKLPSQI 446



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 133/223 (59%), Gaps = 2/223 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K+LDL ++ I+ +P SI DL+ L  L L  N+++ALP  +  LV L +L L  N L+SLP
Sbjct: 105 KRLDLSSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGLTSLP 164

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           DS+ +L  L+ L +  N L E+P  I Q SSL  L + YNR+ ++   +G++  L+++ +
Sbjct: 165 DSLSALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLKMIDL 224

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N I++LP T+  +SSL    +S+N L ++P+ +   T L ++++ +N  DL +LP ++
Sbjct: 225 RENKIRELPATIGQISSLLVCLLSYNHLRTIPDEIGQCTELTQLDLQHN--DLVSLPSTM 282

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           GNL  L  L I  N++R LP       +L    V+ N LE  P
Sbjct: 283 GNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALP 325



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 147/307 (47%), Gaps = 47/307 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDS+  L+ L +LDL  N++  +P  I  +SSL+ L L  NRI+ +   IG L  L  +
Sbjct: 163 LPDSLSALTQLETLDLRHNKLCEIPPVIYQISSLETLWLRYNRIVSVGAEIGRLKRLKMI 222

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR N+I  LP  + ++  L    L  N+L ++PD IG    L +L ++ NDL  LP T+
Sbjct: 223 DLRENKIRELPATIGQISSLLVCLLSYNHLRTIPDEIGQCTELTQLDLQHNDLVSLPSTM 282

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-SSLSSLRELDVSF 286
           G  S+L  L + YN+L+ LP  +   H LE   V  N ++ LP  M +SL +L+ +++S 
Sbjct: 283 GNLSNLIRLGIRYNKLRYLPPGMSNCHKLEEFIVESNQLEALPDGMLTSLPNLKTINLSR 342

Query: 287 NELESVPES-------------------------LCFATTLVKMNIGNN----------- 310
           NEL + P                              AT L K+N+  N           
Sbjct: 343 NELTNFPAGGPQQFASAVTINMEHNSISKIPFGIFAKATGLTKLNLKENGLTSMPLDMGA 402

Query: 311 ----------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                        LR LP  I  L  LE L +SNNQ++ LP     L +LR L ++EN L
Sbjct: 403 WTAMTELNLSTNQLRVLPDDIDKLINLEVLVLSNNQLKKLPSQIGALKKLRELDLEENEL 462

Query: 361 EVPPRNI 367
           +  P  I
Sbjct: 463 DSVPSEI 469



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 74/162 (45%), Gaps = 25/162 (15%)

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           K+L + ++D+  +P +I     L EL +  N+L ALP  +G +  L  L +  N +  LP
Sbjct: 105 KRLDLSSSDIVSIPTSIRDLVQLTELFLYKNKLTALPHEIGNLVNLTKLGLSENGLTSLP 164

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            ++S+L+ L  LD+  N+L       C                   +P  I  +  LE L
Sbjct: 165 DSLSALTQLETLDLRHNKL-------C------------------EIPPVIYQISSLETL 199

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            +  N+I  +      L RL+++ ++EN +   P  I ++ +
Sbjct: 200 WLRYNRIVSVGAEIGRLKRLKMIDLRENKIRELPATIGQISS 241


>gi|358339444|dbj|GAA47507.1| leucine-rich repeat protein soc-2 homolog [Clonorchis sinensis]
          Length = 620

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 179/365 (49%), Gaps = 83/365 (22%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN L ++   LPD IG+L+ L +LDLS N+I ++P  IG  ++LK L+L  N++  LP+S
Sbjct: 258 QNSLKND---LPDVIGQLTCLTTLDLSNNQITSLPENIGNCTALKSLNLQHNQLQRLPNS 314

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI--- 214
           IG+L +L  L ++ NQ+  +P +L+  V L+E ++ SN LSSLPD +  L+SL  L+   
Sbjct: 315 IGNLRNLSKLSIKYNQLVEIPQSLANCVLLDEFNVESNQLSSLPDEL--LLSLPNLVNIT 372

Query: 215 ------------------------VETNDLEELPHTI----------------------- 227
                                   V+ N +  +P +I                       
Sbjct: 373 LSRNHFTDFPTGGPGQFKNCISLNVDYNQITTIPQSIFSEATRLNRLNLCDNNITCLVPS 432

Query: 228 --GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
                SS+ EL +  NRL +LP  +G++  LEVL + +N ++ LP  ++ LS LR L + 
Sbjct: 433 DLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLELNFNQLRVLPDEITKLSKLRILGLD 492

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            NELES+PE L    +L ++N+ +N   L   PRS+ NL  L+ +    N I+ LP    
Sbjct: 493 SNELESLPEDLSGLVSLQELNVLSN--RLTTFPRSVENLPKLKVIKAGENDIQRLPPELG 550

Query: 346 MLS------------------------RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
            +S                         L++L ++  PL    RN+VE G+  ++ ++  
Sbjct: 551 NMSALQELHLNDNLNLNSLPVELSLCKNLKILSLENCPLRDIERNVVEGGSAMIIYFLQQ 610

Query: 382 LVEKR 386
           +++ R
Sbjct: 611 VIQFR 615



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 160/325 (49%), Gaps = 38/325 (11%)

Query: 70  QDGEKLSLIKLASLIEVSSKKGTRDL----NLQNKLMD----NIEWLPDSI-GKLSSLVS 120
            DG+K  L   +SL +  S    R+L      +N ++D     ++ LP+ I   L  L  
Sbjct: 102 HDGKKFRLHPKSSLRKQRSPDLYRELAECRESKNNVLDLSHCELQQLPNGIFDDLPGLTE 161

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA-LPV 179
           L L  N++ ++PA+IG L+ L++L +  N +  LP  +  L  L  LDLR N++   LP 
Sbjct: 162 LYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARLPKEMAKLTGLEVLDLRHNRLEGNLPE 221

Query: 180 ALSRLVRLEELDLGSNNLSS-----------------------LPDSIGSLISLKKLIVE 216
            L  L +L+ L L  N LS+                       LPD IG L  L  L + 
Sbjct: 222 CLPSLKQLKSLFLKFNKLSNISGIENLKHLTCLVLGQNSLKNDLPDVIGQLTCLTTLDLS 281

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N +  LP  IG C++L+ L + +N+L+ LP ++G +  L  LS++YN + ++P ++++ 
Sbjct: 282 NNQITSLPENIGNCTALKSLNLQHNQLQRLPNSIGNLRNLSKLSIKYNQLVEIPQSLANC 341

Query: 277 SSLRELDVSFNELESVPESLCFA-TTLVKMNIG-NNFADLRALPRSIGNLEMLEELDISN 334
             L E +V  N+L S+P+ L  +   LV + +  N+F D        G  +    L++  
Sbjct: 342 VLLDEFNVESNQLSSLPDELLLSLPNLVNITLSRNHFTDFPT--GGPGQFKNCISLNVDY 399

Query: 335 NQIRVLPDS-FRMLSRLRVLRVQEN 358
           NQI  +P S F   +RL  L + +N
Sbjct: 400 NQITTIPQSIFSEATRLNRLNLCDN 424



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/182 (38%), Positives = 99/182 (54%), Gaps = 8/182 (4%)

Query: 190 LDLGSNNLSSLPDSI-GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           LDL    L  LP+ I   L  L +L + TN L  LP +IGQ + LR L +  N L  LP+
Sbjct: 138 LDLSHCELQQLPNGIFDDLPGLTELYLYTNKLTSLPASIGQLAHLRRLSIQQNMLARLPK 197

Query: 249 AVGKIHTLEVLSVRYNNIK-QLPTTMSSLSSLRELDVSFNELESVP--ESLCFATTLVKM 305
            + K+  LEVL +R+N ++  LP  + SL  L+ L + FN+L ++   E+L   T LV  
Sbjct: 198 EMAKLTGLEVLDLRHNRLEGNLPECLPSLKQLKSLFLKFNKLSNISGIENLKHLTCLV-- 255

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
            +G N      LP  IG L  L  LD+SNNQI  LP++    + L+ L +Q N L+  P 
Sbjct: 256 -LGQNSLK-NDLPDVIGQLTCLTTLDLSNNQITSLPENIGNCTALKSLNLQHNQLQRLPN 313

Query: 366 NI 367
           +I
Sbjct: 314 SI 315



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 59/147 (40%), Positives = 88/147 (59%), Gaps = 2/147 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA 148
           + TR LN  N   +NI  L P  +   SS+V L+L  NR+ ++PA IG L  L+ L+L+ 
Sbjct: 412 EATR-LNRLNLCDNNITCLVPSDLHHWSSVVELNLGSNRLTSLPAEIGELQHLEVLELNF 470

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N++  LPD I  L  L  L L  N++ +LP  LS LV L+EL++ SN L++ P S+ +L 
Sbjct: 471 NQLRVLPDEITKLSKLRILGLDSNELESLPEDLSGLVSLQELNVLSNRLTTFPRSVENLP 530

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRE 235
            LK +    ND++ LP  +G  S+L+E
Sbjct: 531 KLKVIKAGENDIQRLPPELGNMSALQE 557


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  LP  IG L+ L++L++ +NQ+  
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLPIEIGKLQNLQDLNLHSNQLTT 315

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 316 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 346



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 146 YLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  L   VGK+  L  L++  N
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++P  +     L  +N+ +N              
Sbjct: 266 QLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 326 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 385

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 386 PKEIGQL 392



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L  +   +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  LP 
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLPI 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 296 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 323



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 8/262 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+ +N   L  L   +G L+ L  L++S+NQ+  LP     L  L  L +  N L
Sbjct: 233 NLHTLNLSDN--QLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 361 EVPPRNIVEMGAQAVVQYMADL 382
              P   +E+G    +Q + DL
Sbjct: 291 TTLP---IEIGK---LQNLQDL 306



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 150 NQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L+ L   +G L +L  L +  N L  
Sbjct: 210 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  LP  +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 270 LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 387

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 388 EIGQLKNLQTL 398



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 181 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   +G L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++LP  I
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 407



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 122/221 (55%), Gaps = 5/221 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +S+NQ+  LP     L  L  L + +N L +    ++E+G 
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL---LIEVGK 253


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 103/304 (33%), Positives = 165/304 (54%), Gaps = 13/304 (4%)

Query: 75  LSLIKLASLIEVSSKKGT-RDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDL 123
           L LI L+  I+   + GT RDL   LQN    +++D     ++ LP  IG+L +L  L L
Sbjct: 18  LFLIHLSCKIQACEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYL 77

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
             N++  +P  I  L +L+ L L +NR+  LP+ I  L +L  LDL  NQ++ LP  + +
Sbjct: 78  HYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQ 137

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L  L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+ 
Sbjct: 138 LKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF 197

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
              P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L 
Sbjct: 198 ATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQ 257

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + 
Sbjct: 258 TLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTIL 315

Query: 364 PRNI 367
           P+ I
Sbjct: 316 PQEI 319



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 64  IEIGQLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 120

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 121 LDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 180

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 181 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 240

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 241 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 298

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 299 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 345



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 108 LPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 167

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 168 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 227

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 228 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 287

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 288 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 345

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 346 KNLQTLYLNNN 356



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 177 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 236

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 237 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 296

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 297 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 356

Query: 288 ELES 291
           +  S
Sbjct: 357 QFSS 360


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/291 (32%), Positives = 170/291 (58%), Gaps = 6/291 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  L + +  L +L  LD+ +N++ ++P+ +G L +L+KLD+  N++  +P+ +  L 
Sbjct: 92  NQLRCLSEDVRLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLS 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L+ N++S LP    +LV LEELDL +N+L+ +P S   LI+L +L +  N L++
Sbjct: 152 HLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPKSFALLINLVRLNLACNQLKD 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    SLR+L    N L+++P  +  + +LE L +R N ++ LP  + S   L+EL
Sbjct: 212 LPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLP-ELPSCKLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E +  E+L    +L  + + +N   ++++P  I  L+ LE LD++NN I  LP
Sbjct: 271 HAGENQIEILNAENLKHLNSLSVLELRDN--KIKSVPDEITLLQKLERLDLANNDISRLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
            +   LS+L+ L ++ NPL    R++++ G Q +++Y+   ++  D K  P
Sbjct: 329 YTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQ--DDKASP 377



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/320 (26%), Positives = 149/320 (46%), Gaps = 52/320 (16%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP--- 155
           N+L D    LP  I  + SL  LD ++N + +VP+ +  ++SL++L L  N++  LP   
Sbjct: 207 NQLKD----LPADISAMKSLRQLDCTKNYLESVPSELASMASLEQLYLRKNKLRSLPELP 262

Query: 156 --------------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
                               +++  L SL  L+LR N+I ++P  ++ L +LE LDL +N
Sbjct: 263 SCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANN 322

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS---LRELRVDYNRLKALPEA--- 249
           ++S LP ++G+L  LK L +E N L  +   + Q  +   L+ LR      KA P     
Sbjct: 323 DISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRIQDDKASPNEEPP 382

Query: 250 -------------VGKIHTLEVLSVRYNNIKQLPTTMSSL---SSLRELDVSFNELESVP 293
                        +  I TL++L      +  +P  + S    + +  ++ S N+L ++P
Sbjct: 383 VTAMTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTAIP 442

Query: 294 ESLC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
             +     ++  +N G  F  + ++   +  L  L  LDI NN +  LP+    L+RL+V
Sbjct: 443 PRIVELKDSVCDVNFG--FNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQV 500

Query: 353 LRVQENPLEVPPRNIVEMGA 372
           + +  N  +V P  +  M A
Sbjct: 501 INLSFNRFKVFPSVLYRMLA 520



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 153/348 (43%), Gaps = 51/348 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL SL E+ S K  ++L+      + IE L  +++  L+SL  L+L +N+I +VP  I  
Sbjct: 254 KLRSLPELPSCKLLKELHAGE---NQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITL 310

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL-------------------- 177
           L  L++LDL  N I  LP ++G+L  L +L L GN +  +                    
Sbjct: 311 LQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTIRRDLLQKGTQELLKYLRSRI 370

Query: 178 -----------PVA-----------LSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKK 212
                      PV            +  +  L+ LD     ++ +PD + S +    +  
Sbjct: 371 QDDKASPNEEPPVTAMTLPSESRINMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTS 430

Query: 213 LIVETNDLEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +    N L  +P  I +   S+ ++   +N++ ++   +  +H L  L +R N +  LP 
Sbjct: 431 VNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPE 490

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            M +L+ L+ +++SFN  +  P  L     L  + + NN       P  +  +E L  LD
Sbjct: 491 EMEALTRLQVINLSFNRFKVFPSVLYRMLALETILLSNNQVG-SIDPLQLKKMEQLGTLD 549

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + NN +  +P        LR L ++ NP   P   I+  G  AV++Y+
Sbjct: 550 LQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAVLEYL 597



 Score = 54.7 bits (130), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 73/150 (48%), Gaps = 4/150 (2%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           S+  ++   N+I +V   +  L  L  LD+  N +  LP+ +  L  L  ++L  N+   
Sbjct: 451 SVCDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKV 510

Query: 177 LPVALSRLVRLEELDLGSNNLSSL-PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            P  L R++ LE + L +N + S+ P  +  +  L  L ++ NDL ++P  +G C +LR 
Sbjct: 511 FPSVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRT 570

Query: 236 LRVDYNRLKALPEAV---GKIHTLEVLSVR 262
           L ++ N  +    A+   G    LE L  R
Sbjct: 571 LLLEGNPFRTPRAAILAKGTAAVLEYLRSR 600


>gi|157135396|ref|XP_001656638.1| mitotic protein phosphatase 1 regulator, putative [Aedes aegypti]
 gi|108881267|gb|EAT45492.1| AAEL003228-PA [Aedes aegypti]
          Length = 608

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 166/300 (55%), Gaps = 10/300 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           + +++  L  L  L+L +N + ++P  IG L+ L K+++  N++ ELP+S  +L  L  L
Sbjct: 104 ISENVKNLGDLTVLNLQDNALTSLPDGIGCLTKLTKINISRNKLTELPESFFELKELKVL 163

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N  S +   +S L+ LE LD+  N+L+SLP  IG L+ L++L +  N L ELP+ I
Sbjct: 164 NLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLIELPNDI 223

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L ++ +  N LK LP  +G++  LE L V++N++ +LP   +   +L+E+ +S N
Sbjct: 224 VNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELP-DFTGCDALKEIHISNN 282

Query: 288 ELESVPESLCFATTLVK-MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            ++S+P   C     +K +++ +N   +  LP  I  L  L  LD+SNN I  LP     
Sbjct: 283 FIKSIPADFCENLPQLKVLDLRDN--KIEKLPDEISMLASLTRLDLSNNSISSLPSCLST 340

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD--AKTQPVKQKKSWVEMCF 404
           L+ L  L+V+ NP+    R+I++ G Q +++ +     +RD   K  P   K  + E  F
Sbjct: 341 LAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTL----RERDGPGKGGPENVKAPFEESTF 396



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 149/323 (46%), Gaps = 44/323 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG-------- 159
           LP+ I  L +L  +DL++N +  +P  +G L  L+ L +  N ++ELPD  G        
Sbjct: 219 LPNDIVNLRNLHKMDLAKNDLKQLPPVMGELRKLECLYVQHNDVVELPDFTGCDALKEIH 278

Query: 160 ---------------DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                          +L  L  LDLR N+I  LP  +S L  L  LDL +N++SSLP  +
Sbjct: 279 ISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSISSLPSCL 338

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR---LKALPEAVG---------- 251
            +L  L  L VE N +  +   I QC + R L+    R    K  PE V           
Sbjct: 339 STLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFEESTFPD 398

Query: 252 --KIHTLEVLSVRYNNIKQLPTTM---SSLSSLRELDVSFNELESVPESLC-FATTLVKM 305
             ++     + V   N+  +P  +   ++ +S+  +D+S N+L  VP  +   A  L ++
Sbjct: 399 VYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGEVPSGITHLADQLTEL 458

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           NI  N   L+ +P      E +  L+ISNN +  LP+   +L  LR L V  N L+  P 
Sbjct: 459 NISFNL--LKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRELNVANNQLKRIPP 516

Query: 366 NIVEMGAQAVVQYMADLVEKRDA 388
           ++ E+    ++    + +E+ DA
Sbjct: 517 SVYELKGLEILLARDNKIEEIDA 539



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 120/230 (52%), Gaps = 27/230 (11%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   ++   +  ++  L  L  LD+S N + ++P  IG L  L++L L+ NR+I
Sbjct: 158 KELKVLNLAHNDFSEIHSNVSDLIMLEVLDISFNSLNSLPGGIGFLVRLQQLTLNNNRLI 217

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ELP+ I +L +L  +D                       L  N+L  LP  +G L  L+ 
Sbjct: 218 ELPNDIVNLRNLHKMD-----------------------LAKNDLKQLPPVMGELRKLEC 254

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP-EAVGKIHTLEVLSVRYNNIKQLPT 271
           L V+ ND+ ELP   G C +L+E+ +  N +K++P +    +  L+VL +R N I++LP 
Sbjct: 255 LYVQHNDVVELPDFTG-CDALKEIHISNNFIKSIPADFCENLPQLKVLDLRDNKIEKLPD 313

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +S L+SL  LD+S N + S+P  L     LV + +  N   +R++ R I
Sbjct: 314 EISMLASLTRLDLSNNSISSLPSCLSTLAHLVSLQVEGN--PIRSIRRDI 361



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 147/334 (44%), Gaps = 45/334 (13%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +++++ N  + +I    D    L  L  LDL +N+I  +P  I  L+SL +LDL  N I 
Sbjct: 275 KEIHISNNFIKSIP--ADFCENLPQLKVLDLRDNKIEKLPDEISMLASLTRLDLSNNSIS 332

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL-----PVALSRLVR-LEELD--------------- 191
            LP  +  L  LV L + GN I ++          R+++ L E D               
Sbjct: 333 SLPSCLSTLAHLVSLQVEGNPIRSIRRDIIQCGTQRILKTLRERDGPGKGGPENVKAPFE 392

Query: 192 -----------------LGSNNLSSLPDSI---GSLISLKKLIVETNDLEELPHTIGQ-C 230
                            + + NL  +P+ +    +  S+  + +  N L E+P  I    
Sbjct: 393 ESTFPDVYQMKKGRSMIVSNKNLIDVPEQVFLDAAEASVYNVDISKNKLGEVPSGITHLA 452

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
             L EL + +N LK +P    +   +  L++  N +  LP  +  L +LREL+V+ N+L+
Sbjct: 453 DQLTELNISFNLLKTIPMFFSRFERISYLNISNNLLADLPEVVGLLVTLRELNVANNQLK 512

Query: 291 SVPESLCFATTL-VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            +P S+     L + +   N   ++ A    +  L  L  LD++NN I+ +P    +L  
Sbjct: 513 RIPPSVYELKGLEILLARDNKIEEIDATESGLAALPRLATLDLANNNIKQVPPVLGLLKN 572

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           +  L +  N    P   I+E G ++++ Y+ D +
Sbjct: 573 ITTLELIGNGFRQPRHQILEKGTESIMAYLRDRI 606


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  142 bits (359), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  LP  IG L+ L++L++ +NQ+  
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLPIEIGKLQNLQDLNLHSNQLTT 315

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 316 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 346



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 146 YLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  L   VGK+  L  L++  N
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++P  +     L  +N+ +N              
Sbjct: 266 QLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 326 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 385

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 386 PKEIGQL 392



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I KL +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L  +   +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  LP 
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLPI 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 296 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 323



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 8/262 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+ +N   L  L   +G L+ L  L++S+NQ+  LP     L  L  L +  N L
Sbjct: 233 NLHTLNLSDN--QLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 361 EVPPRNIVEMGAQAVVQYMADL 382
              P   +E+G    +Q + DL
Sbjct: 291 TTLP---IEIGK---LQNLQDL 306



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 150 NQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L+ L   +G L +L  L +  N L  
Sbjct: 210 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  LP  +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 270 LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 387

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 388 EIGQLKNLQTL 398



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 181 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   +G L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++LP  I
Sbjct: 238 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 407



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/221 (31%), Positives = 122/221 (55%), Gaps = 5/221 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +S+NQ+  LP     L  L  L + +N L +    ++E+G 
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL---LIEVGK 253


>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
 gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
          Length = 426

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 125/203 (61%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G+LS+L  L LS NR+ +VPA IG L+SL KL LH NR+  +P  IG L SL  L
Sbjct: 205 VPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGL 264

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR NQ+++LP  + +L  L  L L  N L+S+P  IG L SL +L +  N L  +P  I
Sbjct: 265 WLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEI 324

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  N+L ++P  +G++ +LE L +  N +  +P  +  L+ L+EL++  N
Sbjct: 325 GQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGN 384

Query: 288 ELESVPESLCFATTLVKMNIGNN 310
           +L SVP  +   T+L ++ +G+N
Sbjct: 385 QLTSVPAEIGQLTSLERLYLGHN 407



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 127/216 (58%), Gaps = 2/216 (0%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA +G LS+L+KL L  NR+  +P  IG L SLV L L  N+++++P  + +L  LE 
Sbjct: 204 AVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEG 263

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L L  N L+SLP  IG L +L+ L++  N L  +P  IGQ +SL EL +  N+L ++P  
Sbjct: 264 LWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAE 323

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++ +LE L +R N +  +P  +  L+SL  L +  N L SVP  +   T L ++N+  
Sbjct: 324 IGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEG 383

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           N   L ++P  IG L  LE L + +NQ+  +P   R
Sbjct: 384 N--QLTSVPAEIGQLTSLERLYLGHNQLTSVPAVIR 417



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 76/186 (40%), Positives = 115/186 (61%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SLV L L +NR+ +VPA IG L+SL+ L L  N++  LP  IG L +L  L
Sbjct: 228 VPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLTSLPAEIGQLTALRVL 287

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++++P  + +L  L EL L  N L+S+P  IG L SL++L +  N L  +P  I
Sbjct: 288 LLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAEI 347

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL  L +  NRL ++P  +G++  L+ L++  N +  +P  +  L+SL  L +  N
Sbjct: 348 GQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGHN 407

Query: 288 ELESVP 293
           +L SVP
Sbjct: 408 QLTSVP 413



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           E  G++  LE+  V       +P  +  LS+LR+L +S N L SVP  +   T+LVK+ +
Sbjct: 186 ENNGRVVELELEDVGLTGA--VPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYL 243

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +N   L ++P  IG L  LE L + +NQ+  LP     L+ LRVL +  N L   P  I
Sbjct: 244 HDN--RLTSVPAEIGQLTSLEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEI 301

Query: 368 VEM 370
            ++
Sbjct: 302 GQL 304



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 64/132 (48%), Gaps = 2/132 (1%)

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D     A+P  +G++  L  LS+  N +  +P  +  L+SL +L +  N L SVP  +  
Sbjct: 198 DVGLTGAVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQ 257

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            T+L  + + +N   L +LP  IG L  L  L +  NQ+  +P     L+ L  L + +N
Sbjct: 258 LTSLEGLWLRHN--QLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADN 315

Query: 359 PLEVPPRNIVEM 370
            L   P  I ++
Sbjct: 316 QLTSVPAEIGQL 327


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 152/271 (56%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 80  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 139

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 140 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 199

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L
Sbjct: 200 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNL 259

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  LP  IG L+ L++L++ +NQ+  
Sbjct: 260 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLPIEIGKLQNLQDLNLHSNQLTT 317

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 318 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 348



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 158/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 91  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 147

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 148 YLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 207

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  L   VGK+  L  L++  N
Sbjct: 208 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDN 267

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++P  +     L  +N+ +N              
Sbjct: 268 QLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 327

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 328 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 387

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 388 PKEIGQL 394



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 60  QNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 119

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 120 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTT 179

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 180 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 239

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L  +   +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  LP 
Sbjct: 240 NLSDNQLAILLIEVGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLPI 297

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 298 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 325



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 152 NQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 211

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L+ L   +G L +L  L +  N L  
Sbjct: 212 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTT 271

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  LP  +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 272 LPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 331

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 332 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 389

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 390 EIGQLKNLQTL 400



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 127/230 (55%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 183 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 239

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   +G L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++LP  I
Sbjct: 240 NLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEI 299

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 300 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 359

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 360 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 409



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 120/228 (52%), Gaps = 5/228 (2%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L       LP  I  L +L  L L  N++  LP  + +L  L+EL+L SN L+ LP  
Sbjct: 55  LNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 114

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L  LP  IG+  +L+ L +  N+L  LP   GK+  L+ L++  
Sbjct: 115 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSD 174

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ L++  N+L ++ + +     L  +N+ +N   L  LP  IG 
Sbjct: 175 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDN--QLTTLPIEIGK 232

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           L+ L  L++S+NQ+ +L      L  L  L + +N L   P   +E+G
Sbjct: 233 LQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLP---IEIG 277



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 122/220 (55%), Gaps = 5/220 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  L+L G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 40  MDLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 99

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 100 ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 159

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 160 ESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 217

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           +S+NQ+  LP     L  L  L + +N L +    ++E+G
Sbjct: 218 LSDNQLTTLPIEIGKLQNLHTLNLSDNQLAIL---LIEVG 254


>gi|390335916|ref|XP_794429.3| PREDICTED: uncharacterized protein LOC589701 [Strongylocentrotus
           purpuratus]
          Length = 1864

 Score =  142 bits (358), Expect = 3e-31,   Method: Composition-based stats.
 Identities = 99/302 (32%), Positives = 159/302 (52%), Gaps = 6/302 (1%)

Query: 61  MIMCMCC-VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           M  C C  +G++  K    +  +L  V  +    D  L+  L+D  +I  LP  +     
Sbjct: 1   MASCFCVRLGKETVKTLDFRHCNLRFVPEEIVEYDETLEELLLDSNDIRELPRDLFHCEL 60

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L  L +S+N +V +P  +  L  L++LD+  N I+ELPD+I    SL  +++  N +  L
Sbjct: 61  LKKLGVSDNELVTIPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKL 120

Query: 178 P-VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
              +   L  L   D   N L  LP  +  L SL  L +  N L +LP  IGQ SSL  L
Sbjct: 121 SDKSFGNLTCLVYFDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTL 180

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
           + D N+L +LP ++G + +LE L +  N++++LP ++  L  LR L+V  N L+SVP  L
Sbjct: 181 KADNNQLASLPSSIGGLVSLEELILSANDLEELPPSIGLLRRLRHLNVDENMLQSVPAEL 240

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
              + +  +++  N+  L+ LP  IG +  L  +++SNN+++ LP SF  L  L+ L + 
Sbjct: 241 GSCSGITLLSLRGNY--LQVLPDEIGRIAKLTVVNLSNNRLQSLPYSFTKLKNLQALWLS 298

Query: 357 EN 358
           EN
Sbjct: 299 EN 300



 Score =  123 bits (308), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 76/200 (38%), Positives = 117/200 (58%), Gaps = 1/200 (0%)

Query: 90  KGTRDLNLQNKLMDNIEWLPD-SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA 148
           KG + L L    ++ +  L D S G L+ LV  D S NR+  +PA +  L SL  L L  
Sbjct: 102 KGCKSLRLVEVSVNPLGKLSDKSFGNLTCLVYFDASCNRLEYLPAEMDQLESLTDLHLSK 161

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N + +LP++IG L SL  L    NQ+++LP ++  LV LEEL L +N+L  LP SIG L 
Sbjct: 162 NFLHQLPENIGQLSSLTTLKADNNQLASLPSSIGGLVSLEELILSANDLEELPPSIGLLR 221

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L+ L V+ N L+ +P  +G CS +  L +  N L+ LP+ +G+I  L V+++  N ++ 
Sbjct: 222 RLRHLNVDENMLQSVPAELGSCSGITLLSLRGNYLQVLPDEIGRIAKLTVVNLSNNRLQS 281

Query: 269 LPTTMSSLSSLRELDVSFNE 288
           LP + + L +L+ L +S N+
Sbjct: 282 LPYSFTKLKNLQALWLSENQ 301



 Score =  112 bits (280), Expect = 4e-22,   Method: Composition-based stats.
 Identities = 85/244 (34%), Positives = 124/244 (50%), Gaps = 19/244 (7%)

Query: 137 GLSSLKKLDL-HAN------RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           G  ++K LD  H N       I+E  +++ +LL      L  N I  LP  L     L++
Sbjct: 10  GKETVKTLDFRHCNLRFVPEEIVEYDETLEELL------LDSNDIRELPRDLFHCELLKK 63

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE- 248
           L +  N L ++P ++ SLI L++L +  N + ELP  I  C SLR + V  N L  L + 
Sbjct: 64  LGVSDNELVTIPTAVASLIHLEELDISKNGIVELPDNIKGCKSLRLVEVSVNPLGKLSDK 123

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           + G +  L       N ++ LP  M  L SL +L +S N L  +PE++   ++L  +   
Sbjct: 124 SFGNLTCLVYFDASCNRLEYLPAEMDQLESLTDLHLSKNFLHQLPENIGQLSSLTTLKAD 183

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           NN   L +LP SIG L  LEEL +S N +  LP S  +L RLR L V EN L+  P    
Sbjct: 184 NN--QLASLPSSIGGLVSLEELILSANDLEELPPSIGLLRRLRHLNVDENMLQSVP---A 238

Query: 369 EMGA 372
           E+G+
Sbjct: 239 ELGS 242


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N++   P  I  L SL  L
Sbjct: 62  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L  L   I
Sbjct: 122 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 242 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 299

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 300 KNLKMLSLDANQLTALPKEI 319



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 5/255 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    L L N   + +  LP  IG+L +L  L+L  N++  +   I  L +L+KL
Sbjct: 111 EIEQLKSLHKLYLSN---NQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  L   IG L +L  L L  NQ++  P  + +L  L+EL L +N L++ P  I
Sbjct: 168 YLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 227

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  +P+ IG+   L+EL +D N+L  +P+ +G++  L+VL + YN
Sbjct: 228 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +P     L +L+ L +  N+L ++P+ +     L  +N+  N   L  +P+ IG L
Sbjct: 288 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN--QLTTIPKEIGQL 345

Query: 325 EMLEELDISNNQIRV 339
           + L+ L + NNQ  +
Sbjct: 346 QNLQTLYLRNNQFSI 360



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 66/138 (47%), Gaps = 25/138 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +   +LK LPE +G++  L++L +  N +  LP  +  L +L+EL +++N+L + 
Sbjct: 49  VRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT- 107

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                    P+ I  L+ L +L +SNNQ+ +LP     L  L+ 
Sbjct: 108 ------------------------FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQE 143

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L+   + I ++
Sbjct: 144 LNLWNNQLKTISKEIEQL 161


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 144/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+LS+N+++ +P  I  L +L++L L+ N+    P  I  L SL  L
Sbjct: 62  LPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L   P  I
Sbjct: 122 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 182 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 241

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 242 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 299

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 300 KNLKMLSLDANQLTALPKEI 319



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 137/255 (53%), Gaps = 5/255 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    L L N   + +  LP  IG+L +L  L+L  N++  +   I  L +L+KL
Sbjct: 111 EIEQLKSLHKLYLSN---NQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++   P  IG L +L  L L  NQ++  P  + +L  L+EL L +N L++ P  I
Sbjct: 168 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEI 227

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  +P+ IG+   L+EL +D N+L  +P+ +G++  L+VL + YN
Sbjct: 228 GKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN 287

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +P     L +L+ L +  N+L ++P+ +     L  +N+  N   L  +P+ IG L
Sbjct: 288 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN--QLITIPKEIGQL 345

Query: 325 EMLEELDISNNQIRV 339
           + L+ L + NNQ  +
Sbjct: 346 QNLQTLYLRNNQFSI 360



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 36/138 (26%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +   +LKALPE +G++  L++L++  N +  LP  +  L +L+EL +++N+    
Sbjct: 49  VRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQELFLNYNQF--- 105

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                 +  P+ I  L+ L +L +SNNQ+ +LP     L  L+ 
Sbjct: 106 ----------------------KTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQE 143

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L+   + I ++
Sbjct: 144 LNLWNNQLKTISKEIEQL 161


>gi|417771010|ref|ZP_12418908.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682662|ref|ZP_13243876.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716202|ref|ZP_13276216.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116971|ref|ZP_15577343.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400325584|gb|EJO77859.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946978|gb|EKN96984.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410011470|gb|EKO69589.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410787885|gb|EKR81614.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 267

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L +L VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 2/234 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +  +E LP  IG   +L  L+L  N++ ++P  IG L +L+ L+L  N+   LP  IG L
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQL 62

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL GNQ ++LP  + +L  L  L+L  N L+SLP  IG L +L++L +  N   
Sbjct: 63  QNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +D+NR    P+ + +  +L+ L +  + +K LP  +  L +L+ 
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 182

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +  N+L S+P+ +     L ++N+ +N   L+ LP+ IG L+ LE L + +N
Sbjct: 183 LHLDGNQLTSLPKEIGQLQNLFELNLQDN--KLKTLPKEIGQLQKLEVLRLYSN 234



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 101/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L +LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD++ NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 142/245 (57%), Gaps = 7/245 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSI-GKLSSLVSLDLSENRIVAVPATIG 136
           KL S+  E+      +DL + N   + +E LP  I G+L+SL  L+LS+NR+ +VPA IG
Sbjct: 102 KLTSVPAEIGQLASLKDLRITN---NELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIG 158

Query: 137 GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
            L+SL  L L  N++  +P  IG L SL  L L GN+++++P  + RL  L  L L  N 
Sbjct: 159 RLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNK 218

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+S+P  IG L SL  L ++ N L  +P  IG+ +SL  LR+D NRL ++P  +G++  L
Sbjct: 219 LTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTAL 278

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           E L +  N +  +P  +  L+SL  L +S N+L SVP  +   T+L +  + NN   L +
Sbjct: 279 EGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLTSLREFTLHNN--KLTS 336

Query: 317 LPRSI 321
           +P  I
Sbjct: 337 VPAEI 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 3/260 (1%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  +G+L++L  L+L  N +  +P  I GL+SL  L L  N++  +P  IG L SL  L 
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 169 LRGNQISALPVA-LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N++  LP   + RL  L  L+L  N L+S+P  IG L SL  L ++ N L  +P  I
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ +SL  LR+D NRL ++P  +G++ +L  L +  N +  +P  +  L+SL  L +  N
Sbjct: 181 GRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L SVP  +   T+L  + +  N   L ++P  IG L  LE L +  N++  +P     L
Sbjct: 241 KLTSVPAEIGRLTSLTVLRLDGN--RLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRL 298

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + L  L + +N L   P  I
Sbjct: 299 TSLHALFLSDNKLTSVPAEI 318



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 118/219 (53%), Gaps = 3/219 (1%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P  +G L +L  L+LR N+++ LP  +S L  L +L L  N L+S+P  IG L SLK L 
Sbjct: 61  PADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLASLKDLR 120

Query: 215 VETNDLEELPHT-IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           +  N+LE+LP   IG+ +SL  L +  NRL ++P  +G++ +L  L +  N +  +P  +
Sbjct: 121 ITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEI 180

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L+SL  L +  N L SVP  +   T+L  + +  N   L ++P  IG L  L  L + 
Sbjct: 181 GRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGN--KLTSVPAEIGRLTSLTGLGLD 238

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            N++  +P     L+ L VLR+  N L   P  I ++ A
Sbjct: 239 GNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTA 277



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 107/206 (51%), Gaps = 3/206 (1%)

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
            +S  P  L RL  L  L+L +N L+ LP+ I  L SL  L +  N L  +P  IGQ +S
Sbjct: 56  SLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLTSVPAEIGQLAS 115

Query: 233 LRELRVDYNRLKALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           L++LR+  N L+ LP + +G++ +L  L++  N +  +P  +  L+SL  L +  N+L S
Sbjct: 116 LKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLTS 175

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           VP  +   T+L  + +  N   L ++P  IG L  L  L +S N++  +P     L+ L 
Sbjct: 176 VPAEIGRLTSLTVLRLDGN--RLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLT 233

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQ 377
            L +  N L   P  I  + +  V++
Sbjct: 234 GLGLDGNKLTSVPAEIGRLTSLTVLR 259



 Score = 47.0 bits (110), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 3/127 (2%)

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           RL  + +  G++  LE    +  ++   P  +  L++L  L++  NEL  +PE +   T+
Sbjct: 33  RLGVVLDDKGRVAVLEWNEKKLASLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTS 92

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENPL 360
           L  + + +N   L ++P  IG L  L++L I+NN++  LP      L+ L  L + +N L
Sbjct: 93  LTDLFLSDN--KLTSVPAEIGQLASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRL 150

Query: 361 EVPPRNI 367
              P  I
Sbjct: 151 TSVPAEI 157


>gi|455790671|gb|EMF42524.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 267

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N L+SLP  IG L +L+ L +  N    LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL  N++  LP  IG L +L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQLASLPKEIGQLQNLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L  LE LDL  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 124/221 (56%), Gaps = 6/221 (2%)

Query: 70  QDGEKLSLI--KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           Q+ EKL+L   +L SL  E+   +  R LNL     +    LP  IG+L +L  LDL+ N
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG---NQFTSLPKEIGQLQNLERLDLAGN 73

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           ++ ++P  IG L +L+ L+L  N+   LP  IG L +L  LDL GNQ ++LP  + +L +
Sbjct: 74  QLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQK 133

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LE L+L  N  +  P  I    SLK L +  + L+ LP  I    +L+ L +D N+L +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSL 193

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           P+ +G++  L  L+++ N +K LP  +  L +L+ L +  N
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 101/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N +  LP  +  L +LR L+++ N+  S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 60/130 (46%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L +LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD++ NQ+  LP     L  LRVL +  N  
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQF 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|379731184|ref|YP_005323380.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378576795|gb|AFC25796.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 356

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/272 (35%), Positives = 157/272 (57%), Gaps = 10/272 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ +G+L  L  L +  +R   +PA+IG L  L++L +  + + ELP+ IG L +L  L
Sbjct: 90  IPEVLGRLQQLKKLSIFHSRAKRLPASIGQLHQLEELSIQMSLLEELPEEIGQLKNLRCL 149

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +S LP ++ +L +LEEL + ++ L  LP+ IG L SL+KL+VE + LE+LP +I
Sbjct: 150 HLGQLALSYLPKSIGQLQQLEELQVVASPLMYLPEEIGQLSSLRKLVVEHSQLEQLPKSI 209

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G C  L+EL +  N+LK LP  +  +  L+ L +  N +++LP  ++ L  LR L++  N
Sbjct: 210 GHCCQLQELSLRNNKLKKLPSKLCSLQLLQWLDLSQNELRRLPFALAHLPLLRLLNLDGN 269

Query: 288 ELESVPESLCFA--TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           +LE +P   C      L ++++ +N   L  LP +IG L+ L+ + + NNQ+  LP S  
Sbjct: 270 QLEKLP---CIKNWALLYELSVRDN--QLAKLPATIGRLQQLKTMRVENNQLSALPLSIM 324

Query: 346 MLSRLRVLRVQENPL---EVPPRNIVEMGAQA 374
            L  LR L   +NPL   ++ P  IV +   A
Sbjct: 325 DLQELRSLNYHKNPLRQKDIDPELIVWLNNNA 356



 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 155/276 (56%), Gaps = 3/276 (1%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I +L SL  L + +  +  +P  +G L  LKKL +  +R   LP SIG L  L  L ++ 
Sbjct: 71  IQQLFSLEHLFIRQRSLYQIPEVLGRLQQLKKLSIFHSRAKRLPASIGQLHQLEELSIQM 130

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           + +  LP  + +L  L  L LG   LS LP SIG L  L++L V  + L  LP  IGQ S
Sbjct: 131 SLLEELPEEIGQLKNLRCLHLGQLALSYLPKSIGQLQQLEELQVVASPLMYLPEEIGQLS 190

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SLR+L V++++L+ LP+++G    L+ LS+R N +K+LP+ + SL  L+ LD+S NEL  
Sbjct: 191 SLRKLVVEHSQLEQLPKSIGHCCQLQELSLRNNKLKKLPSKLCSLQLLQWLDLSQNELRR 250

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P +L     L  +N+  N   L  LP  I N  +L EL + +NQ+  LP +   L +L+
Sbjct: 251 LPFALAHLPLLRLLNLDGN--QLEKLP-CIKNWALLYELSVRDNQLAKLPATIGRLQQLK 307

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
            +RV+ N L   P +I+++     + Y  + + ++D
Sbjct: 308 TMRVENNQLSALPLSIMDLQELRSLNYHKNPLRQKD 343



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 113/209 (54%), Gaps = 1/209 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M  +E LP+ IG+L +L  L L +  +  +P +IG L  L++L + A+ ++ LP+ IG L
Sbjct: 130 MSLLEELPEEIGQLKNLRCLHLGQLALSYLPKSIGQLQQLEELQVVASPLMYLPEEIGQL 189

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L +  +Q+  LP ++    +L+EL L +N L  LP  + SL  L+ L +  N+L 
Sbjct: 190 SSLRKLVVEHSQLEQLPKSIGHCCQLQELSLRNNKLKKLPSKLCSLQLLQWLDLSQNELR 249

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  +     LR L +D N+L+ LP  +     L  LSVR N + +LP T+  L  L+ 
Sbjct: 250 RLPFALAHLPLLRLLNLDGNQLEKLP-CIKNWALLYELSVRDNQLAKLPATIGRLQQLKT 308

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN 310
           + V  N+L ++P S+     L  +N   N
Sbjct: 309 MRVENNQLSALPLSIMDLQELRSLNYHKN 337


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 161/333 (48%), Gaps = 29/333 (8%)

Query: 67  CVGQDGEKLSLIKL-ASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE 125
           C    G  L+ +K  A  +++ + +G   ++L ++ + +I   P+ +  ++ L  LD+S 
Sbjct: 377 CEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSI---PEEVFDITDLEVLDVSN 433

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N + ++P  IG L  L +L    N +  LP +I  +L L +L +  N++S  P  + +L 
Sbjct: 434 NELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQ 493

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           +L  L +  N L  +P  + SL +L+ L V +N+L   P  + +   LREL +  N+L  
Sbjct: 494 KLAHLFMNDNQLREVPPGVCSLPNLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTE 553

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +P  +  +  LEV  V  N +  LP  MS L  LRE+ +  N+ ++ PE LC        
Sbjct: 554 VPPGLCSLSNLEVFIVINNELSTLPPGMSQLLKLREILLGNNKFDTFPEVLC-------- 605

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
                             L  +EELDI NN I  LP +     +L+ L V  NPL  PP+
Sbjct: 606 -----------------ELPAMEELDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQ 648

Query: 366 NIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS 398
           ++ + G  A++ ++    EK   K    ++K S
Sbjct: 649 DVCKQGTGAIMAFLKQEAEKEGTKKARPEEKGS 681



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 131/274 (47%), Gaps = 25/274 (9%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
            + KL  L  L ++ N++  VPA +  L +L+ LD+  N++   P  +  L  L  L + 
Sbjct: 145 GVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYIN 204

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            NQ++  P  +  L  L  L++ +N +  LPD +  L  LK L V     +E P  + Q 
Sbjct: 205 DNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQL 264

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L  L     +   +P+ VG +  L+VL++  N ++ LP+TMS + +LRE+ +  N+  
Sbjct: 265 KTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFN 324

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           + PE LC                          L  +E+LDISNN I  LP +     +L
Sbjct: 325 TFPEVLC-------------------------ELPAMEKLDISNNNITRLPTALHRADKL 359

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
            VL V  NPL  PP ++ E G  A++ ++    E
Sbjct: 360 EVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAE 393



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%), Gaps = 28/276 (10%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L+L N+ + +I   P+ +  ++ L  LD+S+N++ ++P  IG L  L +L    N +  L
Sbjct: 17  LDLSNQGLTSI---PEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLHADGNMLTSL 73

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
             +IG L  L +L +  N+++ LP  + +L +L  L +  N L+ +P  I  L +L+ L+
Sbjct: 74  QQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLV 133

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           V  N L      + +   LR+L ++ N+L  +P  V  +  LE+L V  N +   P  + 
Sbjct: 134 VSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVE 193

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L  LREL ++ N+L   P  +C                      S+ NL +   L++SN
Sbjct: 194 KLQKLRELYINDNQLTEAPSGVC----------------------SLPNLAV---LNVSN 228

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N IR LPD    L+RL+ L V+    +  PR ++++
Sbjct: 229 NPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQL 264



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/282 (29%), Positives = 131/282 (46%), Gaps = 19/282 (6%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  + KL  L  L +++N++   P+ +  L +L  L++  N I  LPD +  L  L  L
Sbjct: 188 FPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTL 247

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +RG Q    P  + +L  L  L  G      +PD +GSL  L+ L ++ N L  LP T+
Sbjct: 248 SVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTM 307

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +LRE+ +  N+    PE + ++  +E L +  NNI +LPT +     L  LDVS N
Sbjct: 308 SHMHNLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGN 367

Query: 288 ELESVPESLCFATT-----LVKMNIGN------------NFAD--LRALPRSIGNLEMLE 328
            L   P  +C   T      +K    N            +  D  L ++P  + ++  LE
Sbjct: 368 PLTYPPHDVCEQGTGAILAFLKQKAENLQLQTVRGCLQVDLTDQGLTSIPEEVFDITDLE 427

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LD+SNN++  +P++   L +L  L    N L   P+ I  M
Sbjct: 428 VLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASM 469



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/292 (27%), Positives = 134/292 (45%), Gaps = 27/292 (9%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+ N   + I  LPD + +L+ L +L +   +    P  +  L +L  L     +   +
Sbjct: 224 LNVSN---NPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGGCKFDIV 280

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD +G L  L  L L  N +  LP  +S +  L E+ L  N  ++ P+ +  L +++KL 
Sbjct: 281 PDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFPEVLCELPAMEKLD 340

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV-------------GKIHTLEVLSV 261
           +  N++  LP  + +   L  L V  N L   P  V              K   L++ +V
Sbjct: 341 ISNNNITRLPTALHRADKLEVLDVSGNPLTYPPHDVCEQGTGAILAFLKQKAENLQLQTV 400

Query: 262 RY--------NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
           R           +  +P  +  ++ L  LDVS NEL S+PE++     L +++   N   
Sbjct: 401 RGCLQVDLTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNM-- 458

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           L +LP++I ++  L  L I++N++   P     L +L  L + +N L EVPP
Sbjct: 459 LTSLPQAIASMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPP 510


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 149/263 (56%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL+ N+   +P  IG L +L++L+L  N++  LP  IG L +L  L
Sbjct: 63  LPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++  P  + +L  L++L+L  N L++L   IG L +L+KL ++ N L+ LP+ I
Sbjct: 123 ILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LPE +G++  L+ L +  N +  LP  +  L +L+ L    N
Sbjct: 183 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL  +P+ +     L  + + +N   L  LP+ IG LE L+EL +++NQ+  LP     L
Sbjct: 243 ELTILPQEIGQLQKLQYLYLSHN--QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+      N L + P+ I ++
Sbjct: 301 KNLQTFISFNNQLTMLPQEIGQL 323



 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/253 (36%), Positives = 145/253 (57%), Gaps = 5/253 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++LNL N  + N   LP  IG+L +L +L LS NR+   P  IG L +L+KL
Sbjct: 89  EIGQLQNLQELNLWNNQLKN---LPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  N++ ALP  + +L  L+EL L +N L+ LP+ I
Sbjct: 146 NLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ LI+  N L  LP  IGQ  +L+ L    N L  LP+ +G++  L+ L + +N
Sbjct: 206 GQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +L+EL ++ N+L ++P+ +     L      NN   L  LP+ IG L
Sbjct: 266 QLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN--QLTMLPQEIGQL 323

Query: 325 EMLEELDISNNQI 337
           + L+ L ++NNQ+
Sbjct: 324 QNLQWLKLNNNQL 336



 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 157/287 (54%), Gaps = 6/287 (2%)

Query: 75  LSLIKLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  KL +L  E+   +  + L+L N   +  + LP  IG+L +L  L+L  N++  +P 
Sbjct: 55  LSSQKLTTLPKEIKQLQNLKSLDLAN---NQFKTLPKEIGQLQNLQELNLWNNQLKNLPK 111

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
            IG L +L+ L L  NR+   P  IG L +L  L+L  NQ++ L   + +L  L++L+L 
Sbjct: 112 EIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLD 171

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            N L +LP+ IG L +L++L +  N L  LP  IGQ  +L+ L +  N+L  LP+ +G++
Sbjct: 172 KNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQL 231

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L++L    N +  LP  +  L  L+ L +S N+L ++P+ +     L ++ + +N   
Sbjct: 232 QNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDN--Q 289

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           L  LP+ IG L+ L+     NNQ+ +LP     L  L+ L++  N L
Sbjct: 290 LTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQL 336



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 69/227 (30%), Positives = 125/227 (55%), Gaps = 5/227 (2%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L++ YN +  L   
Sbjct: 99  LNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L++  N L+++P  +     L ++ + NN   L  LP  IG L+ L+ L +
Sbjct: 159 IGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN--QLTILPEEIGQLKNLQALIL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +NQ+ +LP     L  L++L    N L + P+   E+G    +QY+
Sbjct: 217 GDNQLTILPKEIGQLQNLKLLYSVNNELTILPQ---EIGQLQKLQYL 260



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 116/211 (54%), Gaps = 3/211 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + +  L   IG+L +L  L+L +NR+ A+P  IG L +L++L
Sbjct: 135 EIGQLKNLQKLNLD---YNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQEL 191

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++  LP+ IG L +L  L L  NQ++ LP  + +L  L+ L   +N L+ LP  I
Sbjct: 192 YLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEI 251

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L+ L +  N L  LP  IGQ  +L+EL ++ N+L  LP+ +G++  L+      N
Sbjct: 252 GQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNN 311

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPES 295
            +  LP  +  L +L+ L ++ N+L S  E 
Sbjct: 312 QLTMLPQEIGQLQNLQWLKLNNNQLSSQEEE 342


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 145/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N++   P  I  L SL  L
Sbjct: 42  LPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKL 101

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LPV + +L  L+EL+L +N L ++   I  L +L+KL ++ N L  L   I
Sbjct: 102 YLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEI 161

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+ L +  N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N
Sbjct: 162 GKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDN 221

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L
Sbjct: 222 QLTTIPNEIGKLQKLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQL 279

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++L +  N L   P+ I
Sbjct: 280 KNLKMLSLDANQLTALPKEI 299



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 130/232 (56%), Gaps = 2/232 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N++  +   I  L +L+KL L  N++  L   IG L +L  L
Sbjct: 111 LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+EL L +N L++ P  IG L  L+ L +  N L  +P+ I
Sbjct: 171 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+EL +D N+L  +P+ +G++  L+VL + YN  K +P     L +L+ L +  N
Sbjct: 231 GKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN 290

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L ++P+ +     L  +N+  N   L  +P+ IG L+ L+ L + NNQ+ +
Sbjct: 291 QLTALPKEIGKLKNLKMLNLDAN--QLTTIPKEIGQLQNLQTLYLRNNQLSI 340



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 137/250 (54%), Gaps = 5/250 (2%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++  +P  IG L +L+ LDL  N++I LP  I  L +L  L L  NQ++  P  + 
Sbjct: 34  LSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 93

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L +L L +N L+ LP  IG L +L++L +  N L+ +   I Q  +L++L +D N+
Sbjct: 94  QLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQ 153

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L AL + +GK+  L+ L +  N +   P  +  L +L+EL +S N+L + P+ +     L
Sbjct: 154 LTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKL 213

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + +G+N   L  +P  IG L+ L+EL++  NQ+  +P     L  L+VL +  N  + 
Sbjct: 214 QWLGLGDN--QLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKT 271

Query: 363 PPRNIVEMGA 372
            P   VE G 
Sbjct: 272 IP---VEFGQ 278



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/215 (29%), Positives = 109/215 (50%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  +  + L +  L L   ++  LP  + +L  L+ LDL  N L  LP  I  L +L++
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I Q  SL +L +  N+L  LP  +G++  L+ L++  N +K +   
Sbjct: 78  LFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKE 137

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +  N+L ++ + +     L  + + NN   L   P+ IG L+ L+EL +
Sbjct: 138 IEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNN--QLTTFPKEIGKLQNLQELYL 195

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNNQ+   P     L +L+ L + +N L   P  I
Sbjct: 196 SNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 230


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 162/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP+ I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L ++NNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLNNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 106/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L ++ N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLNNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/276 (33%), Positives = 145/276 (52%), Gaps = 25/276 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVD-----------------------YNRLKALPEAVGKIHTLEVLSVRYN 264
            Q  +L+ L +                        YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 147/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ L + IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L ++ N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 133/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  L + IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 102/187 (54%), Gaps = 2/187 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL    L +L + IG L +L+KL +  N+   L   I Q   L++L ++ N+L  LP+ 
Sbjct: 46  LDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKE 105

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++  L+ LS+  N +  LP  +    +L++L++  N+L  +P+ +     L ++++ +
Sbjct: 106 IGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLS 165

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L +LP  I  L+ L+ LD++NN+   +     +L  L  L ++ N L+  P+ I +
Sbjct: 166 N--KLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQ 223

Query: 370 MGAQAVV 376
           + +  V+
Sbjct: 224 LKSLKVL 230



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399



 Score = 38.9 bits (89), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 57/125 (45%), Gaps = 21/125 (16%)

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-----------FADLR 315
           K L   + + + +R LD+SF  L+++   +     L K+++G N             DL+
Sbjct: 31  KNLEKALLNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 316 ----------ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
                      LP+ IG L+ L+EL + +N++  LP        L+ L +  N L V P+
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 366 NIVEM 370
            I ++
Sbjct: 151 EIGQL 155


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  142 bits (358), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/269 (34%), Positives = 145/269 (53%), Gaps = 2/269 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  +P  + + SSL +L L+ N++  +P  +  LSSL+ LDL  N++  LP+ + +L  
Sbjct: 61  NLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRD 120

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  LDL  NQ+S+LP  +  L  L+ L LG N LS+LP+ + +L +L+ L +  N L  L
Sbjct: 121 LQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTL 180

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  I   +SL+ L +D N+  +LP  V  +  L+ L++  N +  LP  + +LS L  L 
Sbjct: 181 PAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSLH 240

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +  +   S+P  +   + L   ++G     L +LP  IGNL  L+ LD+SNNQ   LP  
Sbjct: 241 LRNSHFSSLPRQVWNLSKL--RHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAE 298

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
              LS LR L +  N     P+ I  + +
Sbjct: 299 ISNLSSLRWLNLSNNQFSSLPKEISNLSS 327



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/251 (35%), Positives = 139/251 (55%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ + +LSSL  LDL  N++ ++P  +  L  L+ LDL  N++  LP  IG+L SL  L
Sbjct: 88  LPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANNQLSSLPGEIGNLSSLDSL 147

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+S LP  +  L  L+ L L +N L++LP  I +L SL+ L ++ N    LP  +
Sbjct: 148 YLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLALDNNQFSSLPGQV 207

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L+ L +  N+L +LP  +G +  L  L +R ++   LP  + +LS LR L ++ N
Sbjct: 208 WNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSKLRHLGLTLN 267

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P  +   + L  +++ NN     +LP  I NL  L  L++SNNQ   LP     L
Sbjct: 268 QLSSLPAEIGNLSELQWLDLSNN--QFSSLPAEISNLSSLRWLNLSNNQFSSLPKEISNL 325

Query: 348 SRLRVLRVQEN 358
           S L+ L + +N
Sbjct: 326 SSLQWLNLGDN 336



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 80/223 (35%), Positives = 125/223 (56%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           +  RDL + +   + +  LP  IG LSSL SL L +N++  +P  +  L +L+ L L  N
Sbjct: 116 RNLRDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNN 175

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           ++  LP  I +L SL  L L  NQ S+LP  +  L  L+ L LG+N L+SLP  IG+L  
Sbjct: 176 QLNTLPAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSE 235

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L  L +  +    LP  +   S LR L +  N+L +LP  +G +  L+ L +  N    L
Sbjct: 236 LSSLHLRNSHFSSLPRQVWNLSKLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSL 295

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           P  +S+LSSLR L++S N+  S+P+ +   ++L  +N+G+N +
Sbjct: 296 PAEISNLSSLRWLNLSNNQFSSLPKEISNLSSLQWLNLGDNLS 338


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  142 bits (358), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  L   IG L+ L++L++ +NQ+  
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 316 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 346



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 146 YLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  L   +GK+  L  L++  N
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++   +     L  +N+ +N              
Sbjct: 266 QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 326 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 385

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 386 PKEIGQL 392



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++   +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  L  
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSI 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 296 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 323



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 150 NQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   IG L +L  L +  N L  
Sbjct: 210 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  L   +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 270 LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 387

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 388 EIGQLKNLQTL 398



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 139/262 (53%), Gaps = 8/262 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+  N   L  L   IG L+ L  L++S+NQ+  LP     L  L  L +  N L
Sbjct: 233 NLHTLNLSGN--QLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 361 EVPPRNIVEMGAQAVVQYMADL 382
                  +E+G    +Q + DL
Sbjct: 291 TTLS---IEIGK---LQNLQDL 306



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 181 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   I
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 407



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/209 (32%), Positives = 115/209 (55%), Gaps = 2/209 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N +  LP 
Sbjct: 98  ELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPR 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
               L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L+ L+ L+
Sbjct: 158 ESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQLKNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +S+NQ+  LP     L  L  L +  N L
Sbjct: 216 LSDNQLTTLPIEIGKLQNLHTLNLSGNQL 244


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 151/271 (55%), Gaps = 3/271 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ LP  IG+L +L  L+LS N++  +P  IG L +L++LDL+ NR+  LP  IG
Sbjct: 78  LFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIG 137

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L  NQ++ LP    +L  L+EL+L  N L++LP  IG L +L+ L +++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L
Sbjct: 198 LTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNL 257

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L++S N+L ++P  +     L  +N+  N   L  L   IG L+ L++L++ +NQ+  
Sbjct: 258 HTLNLSDNQLTTLPIEIGKLQNLHTLNLSGN--QLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L      L  L+ L +  N L + P+ I ++
Sbjct: 316 LSKEIEQLKNLQTLSLSYNRLVILPKEIGQL 346



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/307 (31%), Positives = 157/307 (51%), Gaps = 24/307 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++LNL +   + +  LP  IGKL +L  LDL +NR+  +P  IG L +L+ L
Sbjct: 89  EIGQLKNLQELNLSS---NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTL 145

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N++  LP   G L +L  L+L  NQ++ LP  + +L  L+ L+L SN L++L   I
Sbjct: 146 YLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEI 205

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  LP  IG+  +L  L +  N+L  L   +GK+  L  L++  N
Sbjct: 206 EQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-------------- 310
            +  LP  +  L +L  L++S N+L ++   +     L  +N+ +N              
Sbjct: 266 QLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKN 325

Query: 311 -------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
                  +  L  LP+ IG L+ L+EL++ NNQ+  LP     L  L+ L + +N L   
Sbjct: 326 LQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTF 385

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 386 PKEIGQL 392



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 145/268 (54%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  L L +NR+  +P  IG L +L++L+L +N++  LP  IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLE 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+++ LP+ + +L  L+ L L SN L++LP   G L +L++L +  N L  
Sbjct: 118 NLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTT 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  L + + ++  L+ L++  N +  LP  +  L +L  L
Sbjct: 178 LPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L ++   +     L  +N+ +N   L  LP  IG L+ L  L++S NQ+  L  
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDN--QLTTLPIEIGKLQNLHTLNLSGNQLTTLSI 295

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L+ L +  N L    + I ++
Sbjct: 296 EIGKLQNLQDLNLHSNQLTTLSKEIEQL 323



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP   GKL +L  L+LS+N++  +P  IG L +L+ L+L +N++  L   I  L 
Sbjct: 150 NQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK 209

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   IG L +L  L +  N L  
Sbjct: 210 NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTT 269

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L  L +  N+L  L   +GK+  L+ L++  N +  L   +  L +L+ L
Sbjct: 270 LPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTL 329

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++   P 
Sbjct: 330 SLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMTFPK 387

Query: 343 SFRMLSRLRVL 353
               L  L+ L
Sbjct: 388 EIGQLKNLQTL 398



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 139/262 (53%), Gaps = 8/262 (3%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L+KL L  NR+  LP  IG L +L  L+L  NQ++ LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDL  N L+ LP  IG L +L+ L + +N L  LP   G+  +L+EL +  
Sbjct: 113 IGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSD 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ +G++  L+ L+++ N +  L   +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +N+  N   L  L   IG L+ L  L++S+NQ+  LP     L  L  L +  N L
Sbjct: 233 NLHTLNLSGN--QLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 290

Query: 361 EVPPRNIVEMGAQAVVQYMADL 382
                  +E+G    +Q + DL
Sbjct: 291 TTLS---IEIGK---LQNLQDL 306



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 72/230 (31%), Positives = 126/230 (54%), Gaps = 5/230 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL++   + +  L   I +L +L +L+LS+N++  +P  IG L +L  L
Sbjct: 181 EIGQLQNLQTLNLKS---NQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   I
Sbjct: 238 NLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 297

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L + +N L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N
Sbjct: 298 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNN 357

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
            +  LP  +  L +L+ L +  N L + P+ +     L  + +G  N F+
Sbjct: 358 QLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 407



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 69/216 (31%), Positives = 118/216 (54%), Gaps = 2/216 (0%)

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           ++ A   ++L  ++ + L++  LDL G   + LP  + +L  L++L L  N L +LP  I
Sbjct: 31  EVEAGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEI 90

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L + +N L  LP  IG+  +L+ L +  NRL  LP  +GK+  L+ L +  N
Sbjct: 91  GQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSN 150

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP     L +L+EL++S N+L ++P+ +     L  +N+ +N   L  L + I  L
Sbjct: 151 QLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSN--QLTTLFKEIEQL 208

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++S+NQ+  LP     L  L  L +  N L
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQL 244


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 148/268 (55%), Gaps = 6/268 (2%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +L  +IE ++ +G  +L+L     + +  LP  IG+L++L  L LS N++ ++P   G L
Sbjct: 5   ELLQVIEQAAAEGWTELDLSG---NELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQL 61

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           ++L+ L L  N++  LP  IG L  L  L LR NQ+S LP  + +L  L+ L L  N LS
Sbjct: 62  TNLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLS 121

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP   G L  L+   +  N L  LP  IGQ ++L+ L ++ N+L  LP  +G++  L+ 
Sbjct: 122 TLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQY 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L + YN +  LP  +  LS+L+ L +S+N+L S+PE +   T L  + +   +  L +LP
Sbjct: 182 LHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYL--RYNQLSSLP 239

Query: 319 RSIGNLE-MLEELDISNNQIRVLPDSFR 345
             IG L   L EL +  N +  LP   R
Sbjct: 240 PEIGRLHSHLTELTLDGNPLESLPAEIR 267



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 129/247 (52%), Gaps = 26/247 (10%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             LDLS N + A+P  IG L++L+ L L  N++  LP+  G L +L +L L  NQ+S LP
Sbjct: 19  TELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLP 78

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + +L +L+ L L  N LS LP+ IG L +L+ L +  N L  LP   GQ   L+   +
Sbjct: 79  AEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYL 138

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N+L +LPE +G++  L+ L +  N +  LP  +  LS+L+ L +S+N+L S       
Sbjct: 139 RRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSS------- 191

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                             LP  IG L  L+ L +S NQ+  LP+    L+ L+ L ++ N
Sbjct: 192 ------------------LPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYN 233

Query: 359 PL-EVPP 364
            L  +PP
Sbjct: 234 QLSSLPP 240



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 106/204 (51%), Gaps = 2/204 (0%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LDL GN+++ALP  + +L  L+ L L  N LSSLP+  G L +L+ L +  N L  LP  
Sbjct: 21  LDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLLENQLSTLPAE 80

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IGQ   L+ L +  N+L  LPE +G++  L+ L +  N +  LP     L  L+   +  
Sbjct: 81  IGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLRKLQCFYLRR 140

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L S+PE +   T L  + +  N   L  LP  IG L  L+ L +S NQ+  LP     
Sbjct: 141 NQLSSLPEEIGQLTNLQSLYLNEN--QLSTLPPEIGQLSNLQYLHLSYNQLSSLPPEIGQ 198

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           LS L+ L +  N L   P  I ++
Sbjct: 199 LSNLQYLHLSYNQLSSLPEEIGQL 222



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 48/103 (46%), Positives = 63/103 (61%), Gaps = 1/103 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+LS+L  L LS N++ ++P  IG LS+L+ L L  N++  LP+ IG L +L  L
Sbjct: 169 LPPEIGQLSNLQYLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSL 228

Query: 168 DLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLIS 209
            LR NQ+S+LP  + RL   L EL L  N L SLP  I   IS
Sbjct: 229 YLRYNQLSSLPPEIGRLHSHLTELTLDGNPLESLPAEIRGKIS 271


>gi|365837917|ref|ZP_09379274.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
 gi|364561108|gb|EHM39022.1| leucine Rich repeat-containing domain protein [Hafnia alvei ATCC
           51873]
          Length = 297

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/285 (31%), Positives = 156/285 (54%), Gaps = 6/285 (2%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LNL N+ ++ +    D I   +SL  L +  N++ + P  IG LS L+ L++  N++ ++
Sbjct: 19  LNLDNQQLERL----DGIELNASLTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQMAKI 74

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PDSIG L +L  LDL  N++S LP  + RL +L  L L +N+L+ +P +  +L +L+ L 
Sbjct: 75  PDSIGQLRALEMLDLGHNRLSELPDTMGRLTQLIYLYLSNNSLTDIPATFSALRNLRYLN 134

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L  +P  +   S+L ELR+  N++  L E +G +  L+ L +  N+  Q P ++ 
Sbjct: 135 ITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKIGDLKNLQELHLMNNHFSQFPDSIG 194

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L+ LR LD+S N ++S+P+S      L  +N    F +L  +P +I  L  L+ LD+  
Sbjct: 195 QLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNF--RFNNLSEVPGTIAALTHLQTLDLRA 252

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           N +  LP+S + L  L+ L ++ N     P  +  +  Q  + ++
Sbjct: 253 NNLTSLPESIQELKNLKRLDLRWNSFTTYPEQLASLVKQGCLIHI 297



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 53/160 (33%), Positives = 89/160 (55%), Gaps = 10/160 (6%)

Query: 58  VPIMIMCMCCVGQDGEKLSLI--KLASLIE-VSSKKGTRDLNLQNKLMDNIEWLPDSIGK 114
           +P  +  M  +    E+L L   K++ L E +   K  ++L+L N   ++    PDSIG+
Sbjct: 143 IPEAVFAMSAL----EELRLYNNKISVLAEKIGDLKNLQELHLMN---NHFSQFPDSIGQ 195

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L+ L  LD+S NRI ++P +   L+ L+ L+   N + E+P +I  L  L  LDLR N +
Sbjct: 196 LTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPGTIAALTHLQTLDLRANNL 255

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           ++LP ++  L  L+ LDL  N+ ++ P+ + SL+    LI
Sbjct: 256 TSLPESIQELKNLKRLDLRWNSFTTYPEQLASLVKQGCLI 295


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKS 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 150/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDLS N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|359464519|ref|ZP_09253082.1| Miro domain-containing protein, partial [Acaryochloris sp. CCMEE
           5410]
          Length = 289

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 153/285 (53%), Gaps = 6/285 (2%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           +L  +I  ++++G  +L+L  + +D+   LP+  G+L+SL SLDL    + ++P ++G L
Sbjct: 5   QLLKIIWEAAQRGDTELDLGGERLDS---LPEEFGQLTSLSSLDLRRTHLESLPKSLGQL 61

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + L  LDL  N +  LP  +  L  L YLDL  N ++ L     +L  L +L L  N L 
Sbjct: 62  TKLTYLDLSNNNLGTLPAELDQLTYLTYLDLSDNSLTELTKRFGQLSSLNQLYLSQNELK 121

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           SLP + G L  L  L + +N    LP T+GQ  +L  L ++ N+L  LP+ +G++  L  
Sbjct: 122 SLPKNFGQLKKLTYLDLTSNHFVSLPKTLGQLINLTHLNLNSNKLTRLPKELGQLVNLNS 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD---LR 315
           L+V  N +  LP  +  L+ L  L+ + N L S+P+ +     L ++ +G+ F++     
Sbjct: 182 LNVAGNQLVCLPEILVQLTKLNSLNCAGNGLTSLPKGISQLINLTELGLGSTFSERNRFT 241

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +LP   G L  L  LD+S NQ+  LP+ F  L+ L  L +  N L
Sbjct: 242 SLPEEFGQLTNLTRLDLSGNQLTSLPEEFGQLTNLTRLDLSGNQL 286



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/242 (36%), Positives = 129/242 (53%), Gaps = 7/242 (2%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++E LP S+G+L+ L  LDLS N +  +PA +  L+ L  LDL  N + EL    G L S
Sbjct: 50  HLESLPKSLGQLTKLTYLDLSNNNLGTLPAELDQLTYLTYLDLSDNSLTELTKRFGQLSS 109

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  N++ +LP    +L +L  LDL SN+  SLP ++G LI+L  L + +N L  L
Sbjct: 110 LNQLYLSQNELKSLPKNFGQLKKLTYLDLTSNHFVSLPKTLGQLINLTHLNLNSNKLTRL 169

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +GQ  +L  L V  N+L  LPE + ++  L  L+   N +  LP  +S L +L EL 
Sbjct: 170 PKELGQLVNLNSLNVAGNQLVCLPEILVQLTKLNSLNCAGNGLTSLPKGISQLINLTELG 229

Query: 284 VSF-----NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           +       N   S+PE     T L ++++  N   L +LP   G L  L  LD+S NQ+ 
Sbjct: 230 LGSTFSERNRFTSLPEEFGQLTNLTRLDLSGN--QLTSLPEEFGQLTNLTRLDLSGNQLT 287

Query: 339 VL 340
            L
Sbjct: 288 SL 289



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 112/228 (49%), Gaps = 25/228 (10%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL   R+  LP+  G L SL  LDLR   + +LP +L +L +L  LDL +NNL +LP 
Sbjct: 20  ELDLGGERLDSLPEEFGQLTSLSSLDLRRTHLESLPKSLGQLTKLTYLDLSNNNLGTLPA 79

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            +  L  L  L +  N L EL    GQ SSL +L +  N LK+LP+  G++  L  L + 
Sbjct: 80  ELDQLTYLTYLDLSDNSLTELTKRFGQLSSLNQLYLSQNELKSLPKNFGQLKKLTYLDLT 139

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N+   LP T+  L +L  L+++ N+L                           LP+ +G
Sbjct: 140 SNHFVSLPKTLGQLINLTHLNLNSNKL-------------------------TRLPKELG 174

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L  L  L+++ NQ+  LP+    L++L  L    N L   P+ I ++
Sbjct: 175 QLVNLNSLNVAGNQLVCLPEILVQLTKLNSLNCAGNGLTSLPKGISQL 222



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/198 (35%), Positives = 106/198 (53%), Gaps = 6/198 (3%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  L    G+LSSL  L LS+N + ++P   G L  L  LDL +N  + LP ++G
Sbjct: 92  LSDNSLTELTKRFGQLSSLNQLYLSQNELKSLPKNFGQLKKLTYLDLTSNHFVSLPKTLG 151

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L++L +L+L  N+++ LP  L +LV L  L++  N L  LP+ +  L  L  L    N 
Sbjct: 152 QLINLTHLNLNSNKLTRLPKELGQLVNLNSLNVAGNQLVCLPEILVQLTKLNSLNCAGNG 211

Query: 220 LEELPHTIGQCSSLRELRV-----DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           L  LP  I Q  +L EL +     + NR  +LPE  G++  L  L +  N +  LP    
Sbjct: 212 LTSLPKGISQLINLTELGLGSTFSERNRFTSLPEEFGQLTNLTRLDLSGNQLTSLPEEFG 271

Query: 275 SLSSLRELDVSFNELESV 292
            L++L  LD+S N+L S+
Sbjct: 272 QLTNLTRLDLSGNQLTSL 289


>gi|421123429|ref|ZP_15583709.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343480|gb|EKO94711.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 267

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 136/244 (55%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L  L+ L +  N    LP  IGQ   LR L +  N+  +
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/189 (35%), Positives = 110/189 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L  L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L +L  L+L  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 120/221 (54%), Gaps = 6/221 (2%)

Query: 70  QDGEKLSLI--KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           Q+ EKL+L   +L SL  E+   +  R LNL     +    LP  IG+L +L  LDL  N
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG---NQFTSLPKEIGQLQNLERLDLDGN 73

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           +  ++P  IG L  L+ L+L  N+   LP  IG L  L  L+L GNQ ++LP  + +L +
Sbjct: 74  QFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQK 133

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LE L+L  N  +  P  I    SLK L +  + L+ LP  I    +L+ L +D N+L +L
Sbjct: 134 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSL 193

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           P+ +G++  L  L+++ N +K LP  +  L +L+ L +  N
Sbjct: 194 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 98/178 (55%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L  LR L+++ N+  S+P+ +     L  +N+ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 25/153 (16%)

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           ++LE LP  IG   +L +L +D N+L +LP+ +G++  L VL++  N    LP  +  L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  LD+                       GN F    +LP+ IG L+ L  L+++ NQ 
Sbjct: 64  NLERLDLD----------------------GNQFT---SLPKEIGQLQKLRVLNLAGNQF 98

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP     L +LRVL +  N     P+ I ++
Sbjct: 99  TSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQL 131


>gi|313224282|emb|CBY20071.1| unnamed protein product [Oikopleura dioica]
          Length = 529

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 99/313 (31%), Positives = 160/313 (51%), Gaps = 51/313 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVA-VPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + I  LP+S+  L+SL  LDL  N++   VP  I  LSSL +L +  N++  L   +G+L
Sbjct: 101 NQISSLPESLANLTSLKRLDLRHNKLEGDVPLVIYQLSSLMELYMTHNKLTRLMSGLGNL 160

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +LV+LD   N+++ +P  L  L  L++L L SN+L+S+P++I    SL  L +  N L+
Sbjct: 161 RNLVHLDFSQNKLTEVPSELGELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLK 220

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL------------------------E 257
            LP  IG C +L  L + YNRL+ +P+++ +   L                        +
Sbjct: 221 SLPEKIGNCENLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQ 280

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES-----------------------VPE 294
           VL++  N  K +P  +S L +L   D SFN++ S                       +P 
Sbjct: 281 VLTISRNTFKDIPD-LSKLDNLTAFDGSFNKISSLRPKVFALPKILKVLLHNNLIKIIPP 339

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +    T+ +++I +N   L ++   IGNL+ L+EL ISNN++  LPD+   +  LRVL 
Sbjct: 340 EIAIWKTVTELDISSNL--LESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLE 397

Query: 355 VQENPLEVPPRNI 367
           + EN +E  P +I
Sbjct: 398 LDENKIEYVPSDI 410



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/270 (32%), Positives = 146/270 (54%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII-ELPDSIGDL 161
           + I  LP  IG L  +     SEN+I ++P ++  L+SLK+LDL  N++  ++P  I  L
Sbjct: 78  NKIHTLPREIGCLREMQIFAASENQISSLPESLANLTSLKRLDLRHNKLEGDVPLVIYQL 137

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL+ L +  N+++ L   L  L  L  LD   N L+ +P  +G L +L+KL++++N L 
Sbjct: 138 SSLMELYMTHNKLTRLMSGLGNLRNLVHLDFSQNKLTEVPSELGELKALQKLMLKSNHLT 197

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            +P  I QC+SL  L + +N+LK+LPE +G    L  LS++YN ++ +P ++     L  
Sbjct: 198 SIPEAISQCTSLSILDMSHNQLKSLPEKIGNCENLTSLSLKYNRLQVIPDSIDQCKKLVH 257

Query: 282 LDVSFNELESVPESLCFATTLVK-MNIG-NNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +V  N++   P S     T+++ + I  N F D+  L +    L+ L   D S N+I  
Sbjct: 258 FNVESNQISCFPPSFLKKCTMIQVLTISRNTFKDIPDLSK----LDNLTAFDGSFNKISS 313

Query: 340 L-PDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           L P  F +   L+VL +  N +++ P  I 
Sbjct: 314 LRPKVFALPKILKVL-LHNNLIKIIPPEIA 342



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 100/347 (28%), Positives = 165/347 (47%), Gaps = 54/347 (15%)

Query: 83  LIEVSSKKGTRDLNLQNKLM---DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLS 139
           L EV S+ G  +L    KLM   +++  +P++I + +SL  LD+S N++ ++P  IG   
Sbjct: 173 LTEVPSELG--ELKALQKLMLKSNHLTSIPEAISQCTSLSILDMSHNQLKSLPEKIGNCE 230

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA------------------- 180
           +L  L L  NR+  +PDSI     LV+ ++  NQIS  P +                   
Sbjct: 231 NLTSLSLKYNRLQVIPDSIDQCKKLVHFNVESNQISCFPPSFLKKCTMIQVLTISRNTFK 290

Query: 181 ----LSRLVRLEELDLGSNNLSSL-----------------------PDSIGSLISLKKL 213
               LS+L  L   D   N +SSL                       P  I    ++ +L
Sbjct: 291 DIPDLSKLDNLTAFDGSFNKISSLRPKVFALPKILKVLLHNNLIKIIPPEIAIWKTVTEL 350

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            + +N LE +   IG    L+EL++  NRL+ LP+ +G +  L VL +  N I+ +P+ +
Sbjct: 351 DISSNLLESVSVGIGNLDQLQELKISNNRLEFLPDTIGSMKALRVLELDENKIEYVPSDI 410

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
              ++L  L+++ N++E +P  +     L K+ +G N  DL  +P  IG L+ L+EL I+
Sbjct: 411 GFCTNLEVLNLTSNKIEQLPTDIGSLQRLRKLLLGEN--DLLQIPPHIGMLDSLQELFIN 468

Query: 334 NN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +N  +  LP+       L++L + + PL   P      G   VVQY+
Sbjct: 469 SNLNLHNLPEHLANCRSLQILSIDKCPLSEIPDEYRLRGPSFVVQYL 515


>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 267

 Score =  142 bits (357), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N L+SLP  IG L  L+ L +  N    LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL+ N++  LP  IG L  L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLNGNQLASLPKEIGQLQKLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L  LE LDL  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 104/180 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDL+ N++ ++P  IG L  L+ L+L  N+   LP  IG L +L  L
Sbjct: 55  LPKEIGQLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERL 114

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ ++LP  + +L +LE L+L  N  +  P  I    SLK L +  + L+ LP  I
Sbjct: 115 DLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEI 174

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L+ L +D N+L +LP+ +G++  L  L+++ N +K LP  +  L +L+ L +  N
Sbjct: 175 LLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N +  LP  +  L  LR L+++ N+  S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L +LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD++ NQ+  LP     L +LRVL +  N  
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQF 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|320169123|gb|EFW46022.1| leucine-rich repeat-containing protein 28 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 1067

 Score =  142 bits (357), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 148/264 (56%), Gaps = 3/264 (1%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           KL  N +  +P +IG+L+ L  LDLS N +  +P +IG L  LK+ D+  N++ ELPDS+
Sbjct: 60  KLSHNELTSVPATIGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSM 119

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
             ++SL  L    NQ+ A P+AL +L  LE+LDL +N ++ LP +IG++  L KL ++ N
Sbjct: 120 SGMVSLYRLRAVDNQLKAFPIALCQLPALEKLDLSNNKITELPAAIGNMPRLVKLTLDKN 179

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  LP  I    +LR+L +  NR+  LP  V ++H +  +    +++   P  +  L +
Sbjct: 180 LLTSLPDAICLLVNLRQLTISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLELRN 239

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           +R+LD+S N L S+P  +     L K+N+ +N   +R +P  +  L  L  LD+  N I 
Sbjct: 240 VRQLDLSRNNLTSIPPEILELKYLEKLNLRSN--QIREIPLHLCMLRKLTSLDLGKNMIT 297

Query: 339 VLPDSFRMLSRLRVLRVQENPLEV 362
             P  F  L  L  L++  NPL+ 
Sbjct: 298 TFPYEFLALRHLDDLKIVGNPLKT 321



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 118/216 (54%), Gaps = 11/216 (5%)

Query: 183 RLVRLEELDLGSNNLSSLP-DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           +L  ++ L +  N L++LP + +G L +L  L +  N+L  +P TIGQ + L  L + YN
Sbjct: 28  KLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPATIGQLTELTLLDLSYN 87

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
            L  LP+++G++  L+   V+ N + +LP +MS + SL  L    N+L++ P +LC    
Sbjct: 88  NLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIALCQLPA 147

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L K+++ NN   +  LP +IGN+  L +L +  N +  LPD+  +L  LR L +  N + 
Sbjct: 148 LEKLDLSNN--KITELPAAIGNMPRLVKLTLDKNLLTSLPDAICLLVNLRQLTISRNRIL 205

Query: 362 VPPRNIVEMG--------AQAVVQYMADLVEKRDAK 389
             P N+ ++         A ++V +   L+E R+ +
Sbjct: 206 DLPHNVSQLHHMISVPWYASSLVSFPPHLLELRNVR 241


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|440293932|gb|ELP86979.1| podocan precursor, putative, partial [Entamoeba invadens IP1]
          Length = 571

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 145/253 (57%), Gaps = 4/253 (1%)

Query: 99  NKLMDNIEWLP-DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           NK   +++ +P D     S+L+S+DLS N I ++P  I    SL    + ANR+  LP++
Sbjct: 9   NKKNQSLKSIPKDCFSNASALLSVDLSNNEITSIPKEISAFKSLTHFRVMANRLTCLPNN 68

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           I  L  L +LDL  NQ ++ PV +S L  LEEL +  N L+ +PD IG+L +L+++    
Sbjct: 69  IVTLTCLRHLDLNANQFTSFPVQISNLTTLEELQMIQNQLTEIPDCIGNLTNLQRISFTA 128

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N+L+ LP ++ +C+++  + +  N     P+ +  +  + +L ++ NN+K++P ++  L 
Sbjct: 129 NNLKALPKSLSKCTNINFVELTSNEFDVFPDVICDLTKVTILMMQQNNLKEIPMSIKRLE 188

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L  L +S N+  + PES+C  T+L ++ + NN  +   +P S+  L  L+ L ++ + I
Sbjct: 189 KLSGLLLSSNQFSTFPESVCEVTSLTQIELDNN--NFVEIPNSLSKLVKLKALVLNKSFI 246

Query: 338 RVLPDSFRMLSRL 350
             L +S  M+S L
Sbjct: 247 SCL-NSVDMMSNL 258



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/224 (27%), Positives = 120/224 (53%), Gaps = 8/224 (3%)

Query: 146 LHANR----IIELP-DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           LH N+    +  +P D   +  +L+ +DL  N+I+++P  +S    L    + +N L+ L
Sbjct: 6   LHYNKKNQSLKSIPKDCFSNASALLSVDLSNNEITSIPKEISAFKSLTHFRVMANRLTCL 65

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P++I +L  L+ L +  N     P  I   ++L EL++  N+L  +P+ +G +  L+ +S
Sbjct: 66  PNNIVTLTCLRHLDLNANQFTSFPVQISNLTTLEELQMIQNQLTEIPDCIGNLTNLQRIS 125

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
              NN+K LP ++S  +++  ++++ NE +  P+ +C  T +  + +  N  +L+ +P S
Sbjct: 126 FTANNLKALPKSLSKCTNINFVELTSNEFDVFPDVICDLTKVTILMMQQN--NLKEIPMS 183

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           I  LE L  L +S+NQ    P+S   ++ L  + +  N   E+P
Sbjct: 184 IKRLEKLSGLLLSSNQFSTFPESVCEVTSLTQIELDNNNFVEIP 227



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/213 (29%), Positives = 116/213 (54%), Gaps = 6/213 (2%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           PD +  LS +  LD+S+N I           +L++LD+  N ++E P  +   +SL  L+
Sbjct: 334 PD-LSMLSKISRLDISQNCITWFDEKTCH-PTLQQLDVSCNPLVEFPVCLSKCVSLKSLN 391

Query: 169 LRGNQISALPVA-LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +    +  +P A LS L  LE L L  N+LSSL +S+  +  LK L +++N+L   P ++
Sbjct: 392 VSDCHLFDVPAAALSTLTNLETLFLACNHLSSL-ESLSVMTKLKALYLQSNNLLHFPRSV 450

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL+ L +  N++  +P+ + ++  LE + +  N I+    +++ + SL+E+DVSFN
Sbjct: 451 FALASLKTLFMSNNQITVIPDQITQLTNLEQIDLCCNAIQSF-DSLTKVPSLKEIDVSFN 509

Query: 288 ELESVPESLCFATTLVKMNI-GNNFADLRALPR 319
            ++++P  +     L  +N+ GN  +    LP 
Sbjct: 510 FIKALPVDIENLKNLCALNVFGNELSYKAKLPH 542



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 90/172 (52%), Gaps = 3/172 (1%)

Query: 197 LSSLP-DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           L S+P D   +  +L  + +  N++  +P  I    SL   RV  NRL  LP  +  +  
Sbjct: 15  LKSIPKDCFSNASALLSVDLSNNEITSIPKEISAFKSLTHFRVMANRLTCLPNNIVTLTC 74

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N     P  +S+L++L EL +  N+L  +P+ +   T L +++   N  +L+
Sbjct: 75  LRHLDLNANQFTSFPVQISNLTTLEELQMIQNQLTEIPDCIGNLTNLQRISFTAN--NLK 132

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           ALP+S+     +  +++++N+  V PD    L+++ +L +Q+N L+  P +I
Sbjct: 133 ALPKSLSKCTNINFVELTSNEFDVFPDVICDLTKVTILMMQQNNLKEIPMSI 184



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 146/319 (45%), Gaps = 63/319 (19%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ +P SI +L  L  L LS N+    P ++  ++SL +++L  N  +E+P+S+  L+
Sbjct: 175 NNLKEIPMSIKRLEKLSGLLLSSNQFSTFPESVCEVTSLTQIELDNNNFVEIPNSLSKLV 234

Query: 163 SLVYLDLRGNQISAL----------PVALSRLVRLEELDLGSN--------------NLS 198
            L  L L  + IS L           V LS    +   DL +N               L 
Sbjct: 235 KLKALVLNKSFISCLNSVDMMSNLCQVVLSDTKCMFLPDLSTNAKLTSLNVIHGCLSELK 294

Query: 199 SLPDSI-----GSLI---------SLKKLIVETNDLEELPH----------TIGQ----- 229
           SLP S      G++I         +L+ +I+  N L+  P            I Q     
Sbjct: 295 SLPPSCSCRFTGNVIEDVEFPDNGTLQYMILANNKLKTSPDLSMLSKISRLDISQNCITW 354

Query: 230 -----CS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT-MSSLSSLREL 282
                C  +L++L V  N L   P  + K  +L+ L+V   ++  +P   +S+L++L  L
Sbjct: 355 FDEKTCHPTLQQLDVSCNPLVEFPVCLSKCVSLKSLNVSDCHLFDVPAAALSTLTNLETL 414

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N L S+ ESL   T L  + + +N  +L   PRS+  L  L+ L +SNNQI V+PD
Sbjct: 415 FLACNHLSSL-ESLSVMTKLKALYLQSN--NLLHFPRSVFALASLKTLFMSNNQITVIPD 471

Query: 343 SFRMLSRLRVLRVQENPLE 361
               L+ L  + +  N ++
Sbjct: 472 QITQLTNLEQIDLCCNAIQ 490



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/266 (24%), Positives = 124/266 (46%), Gaps = 35/266 (13%)

Query: 101 LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
           +++++E+ PD+ G L  ++   L+ N++   P  +  LS + +LD+  N I    +    
Sbjct: 308 VIEDVEF-PDN-GTLQYMI---LANNKLKTSP-DLSMLSKISRLDISQNCITWFDEKTCH 361

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETND 219
             +L  LD+  N +   PV LS+ V L+ L++   +L  +P + + +L +L+ L +  N 
Sbjct: 362 P-TLQQLDVSCNPLVEFPVCLSKCVSLKSLNVSDCHLFDVPAAALSTLTNLETLFLACNH 420

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L  ++   + L+ L +  N L   P +V  + +L+ L +  N I  +P  ++ L++L
Sbjct: 421 LSSL-ESLSVMTKLKALYLQSNNLLHFPRSVFALASLKTLFMSNNQITVIPDQITQLTNL 479

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            ++D+  N ++S                   F  L  +P        L+E+D+S N I+ 
Sbjct: 480 EQIDLCCNAIQS-------------------FDSLTKVPS-------LKEIDVSFNFIKA 513

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPR 365
           LP     L  L  L V  N L    +
Sbjct: 514 LPVDIENLKNLCALNVFGNELSYKAK 539



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 27/195 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPA-----------------------TIGGLSSLKKL 144
            P  + K  SL SL++S+  +  VPA                       ++  ++ LK L
Sbjct: 377 FPVCLSKCVSLKSLNVSDCHLFDVPAAALSTLTNLETLFLACNHLSSLESLSVMTKLKAL 436

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L +N ++  P S+  L SL  L +  NQI+ +P  +++L  LE++DL  N + S  DS+
Sbjct: 437 YLQSNNLLHFPRSVFALASLKTLFMSNNQITVIPDQITQLTNLEQIDLCCNAIQSF-DSL 495

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK---ALPEAVGKIHTLEVLSV 261
             + SLK++ V  N ++ LP  I    +L  L V  N L     LP     +   +V  V
Sbjct: 496 TKVPSLKEIDVSFNFIKALPVDIENLKNLCALNVFGNELSYKAKLPHLEKTVDFFQVQQV 555

Query: 262 RYNNIKQLPTTMSSL 276
              N K  P T S++
Sbjct: 556 VLKNPKDEPDTNSTV 570



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/167 (23%), Positives = 81/167 (48%), Gaps = 7/167 (4%)

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           S+L  + +  N + ++P+ +    +L    V  N +  LP  + +L+ LR LD++ N+  
Sbjct: 27  SALLSVDLSNNEITSIPKEISAFKSLTHFRVMANRLTCLPNNIVTLTCLRHLDLNANQFT 86

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           S P  +   TTL ++ +  N   L  +P  IGNL  L+ +  + N ++ LP S    + +
Sbjct: 87  SFPVQISNLTTLEELQMIQN--QLTEIPDCIGNLTNLQRISFTANNLKALPKSLSKCTNI 144

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
             + +  N  +V P  I ++    ++     ++++ + K  P+  K+
Sbjct: 145 NFVELTSNEFDVFPDVICDLTKVTIL-----MMQQNNLKEIPMSIKR 186



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/124 (34%), Positives = 68/124 (54%), Gaps = 4/124 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT 134
           L+   L+SL  +S     + L LQ+   +N+   P S+  L+SL +L +S N+I  +P  
Sbjct: 416 LACNHLSSLESLSVMTKLKALYLQS---NNLLHFPRSVFALASLKTLFMSNNQITVIPDQ 472

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           I  L++L+++DL  N I    DS+  + SL  +D+  N I ALPV +  L  L  L++  
Sbjct: 473 ITQLTNLEQIDLCCNAIQSF-DSLTKVPSLKEIDVSFNFIKALPVDIENLKNLCALNVFG 531

Query: 195 NNLS 198
           N LS
Sbjct: 532 NELS 535


>gi|421126392|ref|ZP_15586625.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410436101|gb|EKP85224.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 267

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 139/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++ +N   L +LP+ IG L+ L EL++ +N+++ LP     L +L VLR+  N   +  +
Sbjct: 184 HLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 132/234 (56%), Gaps = 2/234 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +  +E LP  IG   +L  L+L  N++ ++P  IG L +L+ L+L  N+   LP  IG L
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQL 62

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL GNQ ++LP  + +L  L  L+L  N L+SLP  IG L +L++L +  N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +D+NR    P+ + +  +L+ L +  + +K LP  +  L +L+ 
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 182

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +  N+L S+P+ +     L ++N+ +N   L+ LP+ IG L+ LE L + +N
Sbjct: 183 LHLDSNQLTSLPKEIGQLQNLFELNLQDN--KLKTLPKEIGQLQKLEVLRLYSN 234



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 101/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L +LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD+  NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|418726059|ref|ZP_13284671.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960840|gb|EKO24593.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 267

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L  L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++ +N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 111/189 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L +L  L
Sbjct: 32  LPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ+++LP  + +L  LE LDL  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ   LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 3/157 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL     + +  LP  IG+L +L  LDL+ N+  ++P  IG L  L+ L
Sbjct: 81  EIGQLQNLRVLNLAG---NQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 137

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR    P  I    SL +L L G+Q+  LP  +  L  L+ L L SN L+SLP  I
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 197

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           G L +L +L ++ N L+ LP  I Q  +L+ LR+  N
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L  LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD+  NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score =  141 bits (356), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/276 (31%), Positives = 150/276 (54%), Gaps = 35/276 (12%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   +  +P  I  L+SL++L+L  N+I E+P+++  L SL  L L+ NQI  +P A
Sbjct: 21  LDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEA 80

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L+ L  L+ L L +N +S +P+++  L SL++L +  N + E+P  +   +SL+EL +  
Sbjct: 81  LTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSD 140

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+++ +PEA+  + +LE+L +  N IK++P  ++ L+SL+ L +S N++  +PE+L   T
Sbjct: 141 NQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLT 200

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +L                         + L + NNQIR +P++   L  L+ L +Q NP+
Sbjct: 201 SL-------------------------QNLHLKNNQIREIPEALAHLVNLKRLVLQNNPI 235

Query: 361 EVPPRNIVEMG----------AQAVVQYMADLVEKR 386
              P  I+  G           QA+  Y+    EKR
Sbjct: 236 TNVPPEIIRQGWGKTILDDGNPQAIFSYLKHKGEKR 271



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/228 (33%), Positives = 136/228 (59%), Gaps = 3/228 (1%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK 142
           LI+ +  +    L+L  +   N+  +P  I  L+SL  L+LS N+I  +P  +  L+SL+
Sbjct: 9   LIQRAKDERAEKLDLSGR---NLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQ 65

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +L L  N+I E+P+++  L SL  L L  NQIS +P AL++L  L+ LDL  N +  +P 
Sbjct: 66  RLYLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPK 125

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           ++  L SL++L +  N + E+P  +   +SL  L ++ N++K +PEA+  + +L+VL + 
Sbjct: 126 ALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLS 185

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            N I+++P  ++ L+SL+ L +  N++  +PE+L     L ++ + NN
Sbjct: 186 NNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNN 233



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 171/309 (55%), Gaps = 21/309 (6%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+      ++LNL N   + I  +P+++ +L+SL  L L  N+I  +P  +  L+SL+ L
Sbjct: 34  EIPHLTSLQELNLSN---NQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVL 90

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N+I E+P+++  L SL  LDL  NQI  +P AL+ L  L+ELDL  N +  +P+++
Sbjct: 91  YLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREIPEAL 150

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L SL+ L +  N ++E+P  +   +SL+ L +  N+++ +PEA+ ++ +L+ L ++ N
Sbjct: 151 AHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNN 210

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLC---FATTLVKMNIGN-----NFADLRA 316
            I+++P  ++ L +L+ L +  N + +VP  +    +  T+  ++ GN     ++   + 
Sbjct: 211 QIREIPEALAHLVNLKRLVLQNNPITNVPPEIIRQGWGKTI--LDDGNPQAIFSYLKHKG 268

Query: 317 LPRSIGNLEML--EELDISNNQI--RVLPDSFRMLS-RLRVLRVQENPLEVPPR---NIV 368
             R +  L++L   E D+    +  R+L ++F     +   + +++ PL   P    NI 
Sbjct: 269 EKRPLNELKVLLVGEGDVGKTSLLKRLLHNTFNSGEPKTPGINIEKWPLPQKPDIRLNIW 328

Query: 369 EMGAQAVVQ 377
           + G Q V+Q
Sbjct: 329 DFGGQKVMQ 337


>gi|293395817|ref|ZP_06640099.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
 gi|291421754|gb|EFE95001.1| leucine-rich repeat protein [Serratia odorifera DSM 4582]
          Length = 296

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 129/239 (53%), Gaps = 3/239 (1%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  + G S L+K+ L+ NR+   P  I D  +L  L++  NQ++ LP  +  L +LE LD
Sbjct: 29  PLALQG-SQLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLTQLPQQIGLLRQLEMLD 87

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
            G N  + +PD IG L  L+ L +  N   +LPHT+GQ   LR L V  NRL A+P AV 
Sbjct: 88  FGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVPTAVW 147

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +  N I  LP  +  L+ LREL +  N L  +P ++   T L  +++ NN 
Sbjct: 148 QLGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNA 207

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +  LP S G L  L EL++  N +  LP++F  L  L+ L ++ N L   P  + EM
Sbjct: 208 --IERLPDSFGQLSQLRELNLRFNALTHLPEAFCQLGALQSLDLRANRLSTLPAGMAEM 264



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 110/189 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD IG+L+ L  L LS+N    +P T+G L  L+ L++  NR+  +P ++  L +L  L
Sbjct: 96  IPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVPTAVWQLGNLQEL 155

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N I++LP A+ RL RL EL L  N LS LP +I  L +L  L V  N +E LP + 
Sbjct: 156 RLYNNAITSLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNAIERLPDSF 215

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S LREL + +N L  LPEA  ++  L+ L +R N +  LP  M+ + +LR LD+ +N
Sbjct: 216 GQLSQLRELNLRFNALTHLPEAFCQLGALQSLDLRANRLSTLPAGMAEMKNLRRLDLRWN 275

Query: 288 ELESVPESL 296
           +    P  L
Sbjct: 276 DFTQYPAVL 284



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 129/242 (53%), Gaps = 3/242 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +   P  I   ++L  L++S N++  +P  IG L  L+ LD   N+  ++PD IG
Sbjct: 42  LYDNRLTIFPQQIFDHTNLQVLNISCNQLTQLPQQIGLLRQLEMLDFGHNQATQIPDEIG 101

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L YL L  N  S LP  L +L  L  L++  N L+++P ++  L +L++L +  N 
Sbjct: 102 QLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDNRLAAVPTAVWQLGNLQELRLYNNA 161

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +  LP  IG+ + LREL +  NRL  LP  + ++  L VL V  N I++LP +   LS L
Sbjct: 162 ITSLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNAIERLPDSFGQLSQL 221

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           REL++ FN L  +PE+ C    L  +++  N   L  LP  +  ++ L  LD+  N    
Sbjct: 222 RELNLRFNALTHLPEAFCQLGALQSLDLRAN--RLSTLPAGMAEMKNLRRLDLRWNDFTQ 279

Query: 340 LP 341
            P
Sbjct: 280 YP 281



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 123/216 (56%), Gaps = 1/216 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG L  L  LD   N+   +P  IG L+ L+ L L  N   +LP ++G L 
Sbjct: 68  NQLTQLPQQIGLLRQLEMLDFGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLG 127

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YL++  N+++A+P A+ +L  L+EL L +N ++SLP +IG L  L++L +  N L E
Sbjct: 128 ELRYLNVTDNRLAAVPTAVWQLGNLQELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSE 187

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI + ++L  L V  N ++ LP++ G++  L  L++R+N +  LP     L +L+ L
Sbjct: 188 LPATIAELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAFCQLGALQSL 247

Query: 283 DVSFNELESVPESLCFATTLVKMNI-GNNFADLRAL 317
           D+  N L ++P  +     L ++++  N+F    A+
Sbjct: 248 DLRANRLSTLPAGMAEMKNLRRLDLRWNDFTQYPAV 283



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 112/234 (47%), Gaps = 27/234 (11%)

Query: 163 SLVYLDLRGNQISAL-PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           S  +LD  G  ++ + P+AL    +L ++ L  N L+  P  I    +L+ L +  N L 
Sbjct: 13  SSAHLDRDGQALTHIDPLALQG-SQLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLT 71

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           +LP  IG    L  L   +N+   +P+ +G++  L  L +  N+   LP T+  L  LR 
Sbjct: 72  QLPQQIGLLRQLEMLDFGHNQATQIPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRY 131

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE------------ 329
           L+V+ N L +VP ++     L ++ + NN   + +LP +IG L  L E            
Sbjct: 132 LNVTDNRLAAVPTAVWQLGNLQELRLYNNA--ITSLPAAIGRLTRLRELHLMKNRLSELP 189

Query: 330 -----------LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
                      LD++NN I  LPDSF  LS+LR L ++ N L   P    ++GA
Sbjct: 190 ATIAELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAFCQLGA 243



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/177 (31%), Positives = 91/177 (51%), Gaps = 2/177 (1%)

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L+K+ +  N L   P  I   ++L+ L +  N+L  LP+ +G +  LE+L   +N   Q
Sbjct: 36  QLRKISLYDNRLTIFPQQIFDHTNLQVLNISCNQLTQLPQQIGLLRQLEMLDFGHNQATQ 95

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +P  +  L+ LR L +S N    +P +L     L  +N+ +N   L A+P ++  L  L+
Sbjct: 96  IPDEIGQLTQLRYLYLSDNHFSDLPHTLGQLGELRYLNVTDN--RLAAVPTAVWQLGNLQ 153

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           EL + NN I  LP +   L+RLR L + +N L   P  I E+ A  V+    + +E+
Sbjct: 154 ELRLYNNAITSLPAAIGRLTRLRELHLMKNRLSELPATIAELTALNVLDVANNAIER 210



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 1/116 (0%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
            LM N +  LP +I +L++L  LD++ N I  +P + G LS L++L+L  N +  LP++ 
Sbjct: 179 HLMKNRLSELPATIAELTALNVLDVANNAIERLPDSFGQLSQLRELNLRFNALTHLPEAF 238

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
             L +L  LDLR N++S LP  ++ +  L  LDL  N+ +  P  + SLI+   L+
Sbjct: 239 CQLGALQSLDLRANRLSTLPAGMAEMKNLRRLDLRWNDFTQYPAVLDSLIAQGCLV 294


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  141 bits (356), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 99/286 (34%), Positives = 161/286 (56%), Gaps = 4/286 (1%)

Query: 82  SLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
           SL E+S + G  ++L   N   ++I +LPD IG LS L  LDLSEN+++ +    G LSS
Sbjct: 78  SLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSS 137

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           L++L+L +N +  LP   G L +L  L+L  N I++LP    +L +L  L +  N + ++
Sbjct: 138 LERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTV 197

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
            DSIG L  L+ L    N ++ELP  IG   +L  L +  N+++ LP  +G +  L+ L 
Sbjct: 198 TDSIGGLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLD 257

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N++  LP  +  L +L++LD+  N+L S+P+     T L K+++ NN  +L ++P S
Sbjct: 258 LFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNN--NLTSIPAS 315

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR 365
           I  L+ + EL + +NQ+  LP  F     L  L + +N    +PP 
Sbjct: 316 IIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPE 361



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/264 (35%), Positives = 144/264 (54%), Gaps = 5/264 (1%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           IG L +L  L++S+N I  +P  IG LS LK+LDL  N+++ L    G L SL  L+L  
Sbjct: 86  IGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSS 145

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N +  LP     L  L +L+L SN+++SLP     L  L  L +  N++  +  +IG   
Sbjct: 146 NWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLK 205

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            LR L    NR+K LP  +G +  LE L +R N I+ LP+ + +L +L+ LD+  N L S
Sbjct: 206 KLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTS 265

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P  +     L  +++ +N  DL +LP+  G+L  LE+L + NN +  +P S   L ++ 
Sbjct: 266 LPPEIGKLKNLKDLDLMHN--DLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIP 323

Query: 352 VLRVQENPL-EVPPR--NIVEMGA 372
            L +Q N L  +PP   N + +G 
Sbjct: 324 ELYLQSNQLSSLPPEFGNHLSLGG 347



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/258 (36%), Positives = 137/258 (53%), Gaps = 5/258 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           RDLNL +   ++I  LP    KL  L SL ++ N +V V  +IGGL  L+ L    NRI 
Sbjct: 162 RDLNLDS---NSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRIK 218

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ELP  IG+L +L  LDLR NQI  LP  +  L  L+ LDL  N+L+SLP  IG L +LK 
Sbjct: 219 ELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKD 278

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  NDL  LP   G  + L +L +  N L ++P ++ ++  +  L ++ N +  LP  
Sbjct: 279 LDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPE 338

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
             +  SL  L +  N+  S+P  +     L +++  +N   +  LP  IG L+ L  LD+
Sbjct: 339 FGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADN--QITELPAEIGRLKKLRSLDL 396

Query: 333 SNNQIRVLPDSFRMLSRL 350
             N I+ LP     L+ L
Sbjct: 397 IGNPIKQLPPEISQLTSL 414



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 138/254 (54%), Gaps = 7/254 (2%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G + L     L + I+ LP  IG L +L +LDL EN+I  +P+ IG L +LK+LDL  N 
Sbjct: 203 GLKKLRYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNH 262

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP  IG L +L  LDL  N +++LP     L  LE+L L +NNL+S+P SI  L  +
Sbjct: 263 LTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKI 322

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
            +L +++N L  LP   G   SL  L +D N+  ++P  + K+  LE LS   N I +LP
Sbjct: 323 PELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELP 382

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN-NFADLRALPRSIGNLEMLE- 328
             +  L  LR LD+  N ++ +P  +   T+L   +  +   +DL  L + + NLE L  
Sbjct: 383 AEIGRLKKLRSLDLIGNPIKQLPPEISQLTSLSSFSFDDPTLSDLNHL-KPLKNLEYLSF 441

Query: 329 ----ELDISNNQIR 338
                L + +N+I+
Sbjct: 442 GFHGTLKVDSNEIK 455



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 84/259 (32%), Positives = 124/259 (47%), Gaps = 11/259 (4%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATI--GGLSSLK--KLDLHANRIIELPDSIGDLLSLVYL 167
           IG L   +  +   +R V +P TI  G +S     K+DL  + +   P        + +L
Sbjct: 17  IGLLLVSIGCEKGPDRPVKIPKTINNGRISGTSEVKIDLSDDSLHLFPTDT----KVTWL 72

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  N +S L   +  L  L  L++  N++  LPD IG+L  LK+L +  N L  L    
Sbjct: 73  NISDNSLSELSPEIGNLKNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEF 132

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ SSL  L +  N LK LP   G +  L  L++  N+I  LP     L  L  L ++ N
Sbjct: 133 GQLSSLERLNLSSNWLKTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGN 192

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           E+ +V +S+     L  +    N   ++ LP  IGNLE LE LD+  NQI  LP     L
Sbjct: 193 EMVTVTDSIGGLKKLRYLYALKN--RIKELPPQIGNLENLETLDLRENQIEFLPSEIGNL 250

Query: 348 SRLRVLRVQENPL-EVPPR 365
             L+ L + +N L  +PP 
Sbjct: 251 RNLKRLDLFKNHLTSLPPE 269


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQKLYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 42/305 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            DL                        LSL Y D       + P  + +   L  L+L  
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYD 385

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
              S+LP  I  L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++ 
Sbjct: 386 CGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR 445

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS+  N +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L
Sbjct: 446 NLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QL 503

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             L   IG L+ L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G   
Sbjct: 504 TNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQ 560

Query: 375 VVQYM 379
            +Q++
Sbjct: 561 NLQWL 565



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 103/182 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  L   I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L +  N
Sbjct: 511 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 288 EL 289
           +L
Sbjct: 571 QL 572



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 6/243 (2%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L   ++  LP  IG L +L  L+L+ N ++ LP  + +L  L+ELDL  N L++ P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L  L+ L +  N L  LP+ IG+  +L++L +  N+L   P+ +G++  L+ L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+  N+   +P+ +     L  +N+ +N   L  LP  IG 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN--QLATLPVEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L+ L++L + NN++ V P     L  L++L   EN L   P+   EMG    +Q + +LV
Sbjct: 231 LQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK---EMGQLQNLQTL-NLV 286

Query: 384 EKR 386
             R
Sbjct: 287 NNR 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 122/219 (55%), Gaps = 2/219 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 216 LSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQL 254



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/332 (30%), Positives = 169/332 (50%), Gaps = 12/332 (3%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV-----QY 378
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++     +     Q+
Sbjct: 298 LKNLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQF 357

Query: 379 MADLVEKRDAKTQPVKQKKSWVEMCFFSRSNK 410
            +   EK++ +      K +  ++ FF  +NK
Sbjct: 358 SSQ--EKKEFENFFQSAKFTLTKISFFLLNNK 387



 Score = 37.7 bits (86), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 21/65 (32%), Positives = 35/65 (53%)

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
            +L+ LP  IG L+ L+ L +  NQ+ VLP     L  L++L ++ N L   P+ I ++ 
Sbjct: 56  QELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLK 115

Query: 372 AQAVV 376
              V+
Sbjct: 116 NLQVL 120


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 134/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359


>gi|291223723|ref|XP_002731858.1| PREDICTED: leucine rich repeat containing 40-like, partial
           [Saccoglossus kowalevskii]
          Length = 1212

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 100/314 (31%), Positives = 155/314 (49%), Gaps = 45/314 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP S+G+   +  + L  N++  +P TI  L+ L+ LDL  N++ E+P S+ DL +L +L
Sbjct: 586 LPASVGEYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHL 645

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND-------- 219
           D+RGNQIS +P  +  L RLE LD+  N LS+LP  I  L +LK L +  ND        
Sbjct: 646 DIRGNQISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDI 705

Query: 220 -----------------------------------LEELPHTIGQCSSLRELRVDYNRLK 244
                                              LE LP  I +   +++L +  NRL 
Sbjct: 706 CSKGVDAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLS 765

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP+ +  +  LEVL V  N ++ +P ++  L++L+ L +S   +  V  ++C  T L  
Sbjct: 766 DLPDEMRNLTQLEVLDVSGNKLENIPPSLYKLTNLQHLILSGTRISIVDSNICNLTKLEL 825

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++  N   +  LP  +G L+ LE LD+ +N I  LP     L +L  L V+ NP+E PP
Sbjct: 826 LDVKGNV--ITKLPPELGALDKLEVLDLQDNDIHNLPRELTSLKKLTKLCVERNPIEEPP 883

Query: 365 RNIVEMGAQAVVQY 378
            +I   G +A   Y
Sbjct: 884 YDICCKGFKAFNHY 897



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/306 (31%), Positives = 157/306 (51%), Gaps = 25/306 (8%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS-LKKLDLHANRIIELPDSIGDLLSLV 165
           +LP+ IG    +  L LS N +  +P  +  +S  L +LDL  N++ E+P  +  L +L 
Sbjct: 426 YLPNCIGDYKHIKKLRLSGNELTTLPDEMKYMSEELDELDLSCNKLDEIPRCVLQLTNLT 485

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           YL+L GN I  +   + RL +L+ LDL  N +  L   +  L  L+ L V  N +EE P 
Sbjct: 486 YLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELPILETLQVGGNPIEEPPL 545

Query: 226 TIGQC--------------------SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           TI +                     +SL E+ +  N    LP +VG+   ++ + +  N 
Sbjct: 546 TICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNLSGNGFICLPASVGEYRHIKKIILGGNK 605

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           + +LP T+S L+ L  LD+S N+L+ +P SL   + L  ++I  N   L  +P +IG+L+
Sbjct: 606 LSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIRGNQISL--IPPNIGSLQ 663

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY--MADLV 383
            LE LD+S N +  LP   + L+ L++L +  N ++ PP +I   G  A  +Y  + +L+
Sbjct: 664 RLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSKGVDAFKRYWQIIELM 723

Query: 384 EKRDAK 389
           EK   K
Sbjct: 724 EKSKNK 729



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 168/333 (50%), Gaps = 26/333 (7%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNK 100
           LT+  IL +G     N +    M +C  G D  K    ++  L+E S  K  ++++L N+
Sbjct: 685 LTNLKILDIGG----NDIKCPPMDICSKGVDAFK-RYWQIIELMEKSKNKDNKEMDLNNQ 739

Query: 101 LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
              N+E+LP  I +   +  L+L  NR+  +P  +  L+ L+ LD+  N++  +P S+  
Sbjct: 740 ---NLEYLPCIISEYGHIKKLNLQNNRLSDLPDEMRNLTQLEVLDVSGNKLENIPPSLYK 796

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L +L +L L G +IS +   +  L +LE LD+  N ++ LP  +G+L  L+ L ++ ND+
Sbjct: 797 LTNLQHLILSGTRISIVDSNICNLTKLELLDVKGNVITKLPPELGALDKLEVLDLQDNDI 856

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAV------GKIHTLEVLSVRYNNIKQLPTTMS 274
             LP  +     L +L V+ N ++  P  +         H  +++ +   N +       
Sbjct: 857 HNLPRELTSLKKLTKLCVERNPIEEPPYDICCKGFKAFNHYWDIIGMMEKNGE------- 909

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
              S  E+D+S  +L  +P  +   T L K+N+ NN+  L ALP  +G L  LEEL++S 
Sbjct: 910 ---SCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNY--LSALPEEVGKLTDLEELNLSR 964

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N+   LP     LS+L +L V +N L V   +I
Sbjct: 965 NKFPELPSIILNLSKLSMLDVSDNQLSVVSSDI 997



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/256 (30%), Positives = 132/256 (51%), Gaps = 6/256 (2%)

Query: 117  SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            S   +DLS  ++V +P+ I   + LKKL+LH N +  LP+ +G L  L  L+L  N+   
Sbjct: 910  SCEEMDLSSKQLVYIPSMISQYTHLKKLNLHNNYLSALPEEVGKLTDLEELNLSRNKFPE 969

Query: 177  LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
            LP  +  L +L  LD+  N LS +   IG   ++K++ +  N +  + +       L +L
Sbjct: 970  LPSIILNLSKLSMLDVSDNQLSVVSSDIG---NIKEVDLSHNSISIITNETNHSYKLTKL 1026

Query: 237  RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
             V  NRL +  E VG    L+ L++  N IK +   +  L  L  L++  N ++ +P+ +
Sbjct: 1027 DVSKNRLTSFRENVGMFEKLQQLNISINEIKSI-DGIHQLCMLTYLNIENNPIKQIPQEI 1085

Query: 297  CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                TL  +   NN+  L ALP SI +L  L ++D+S+N++  +P     L +L  L + 
Sbjct: 1086 SKLKTLTVLKASNNY--LTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLNLC 1143

Query: 357  ENPLEVPPRNIVEMGA 372
             N LE  PR + ++ A
Sbjct: 1144 SNKLESLPRELGQLPA 1159



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/275 (30%), Positives = 143/275 (52%), Gaps = 18/275 (6%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           K ++ + +DL +  +  +PATIG    +KK+ L  N +  LPD + D+  L  +DL  N+
Sbjct: 207 KDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNK 266

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +   P +L +L RL  LDL  N ++SLP+ I SL  L+KL +  N++  LP  +G+ + L
Sbjct: 267 LVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIGVLPLAMGEMTEL 326

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +    ++ LP  +G +  LEVL +  N+I  +P  +  LS L+EL +  N +   P
Sbjct: 327 TSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPRELKKLSKLKELIIDGNSITEPP 386

Query: 294 ESLCFATT-------LVKM--------NIGNNFADLR--ALPRSIGNLEMLEELDISNNQ 336
              C +         +++M         +  NF   R   LP  IG+ + +++L +S N+
Sbjct: 387 MDKCGSVADFRQYWQIIEMLEEYQDESRVEMNFTGRRLFYLPNCIGDYKHIKKLRLSGNE 446

Query: 337 IRVLPDSFRMLS-RLRVLRVQENPLEVPPRNIVEM 370
           +  LPD  + +S  L  L +  N L+  PR ++++
Sbjct: 447 LTTLPDEMKYMSEELDELDLSCNKLDEIPRCVLQL 481



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 88/324 (27%), Positives = 145/324 (44%), Gaps = 62/324 (19%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ +P  + +L++L  L+L+ N I  +   I  L  L+ LDL+ N+++ L   + +L 
Sbjct: 469 NKLDEIPRCVLQLTNLTYLNLNGNVIHNISPDIKRLRKLQTLDLNGNKVMRLIRELAELP 528

Query: 163 SLVYLDLRGNQISALPVALS--------------------RLVRLEELDLGSNNLSSLPD 202
            L  L + GN I   P+ +                     +   L+E++L  N    LP 
Sbjct: 529 ILETLQVGGNPIEEPPLTICEKGVPEFKQYWQIIGMLEKYKDTSLDEMNLSGNGFICLPA 588

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+G    +KK+I+  N L ELP TI + + L  L + +N+LK +P ++  +  L  L +R
Sbjct: 589 SVGEYRHIKKIILGGNKLSELPETISELTQLEILDLSHNKLKEIPSSLFDLSNLSHLDIR 648

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN------------- 309
            N I  +P  + SL  L  LDVS N L ++P  +   T L  ++IG              
Sbjct: 649 GNQISLIPPNIGSLQRLETLDVSENCLSTLPREIKDLTNLKILDIGGNDIKCPPMDICSK 708

Query: 310 ----------------------------NFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
                                       N  +L  LP  I     +++L++ NN++  LP
Sbjct: 709 GVDAFKRYWQIIELMEKSKNKDNKEMDLNNQNLEYLPCIISEYGHIKKLNLQNNRLSDLP 768

Query: 342 DSFRMLSRLRVLRVQENPLE-VPP 364
           D  R L++L VL V  N LE +PP
Sbjct: 769 DEMRNLTQLEVLDVSGNKLENIPP 792



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/281 (28%), Positives = 129/281 (45%), Gaps = 46/281 (16%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I ++ + IG LS LK L +  N +  +PD I +LLSL  L+L  N +  +P +L  L  L
Sbjct: 87  IKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSNNSMLQVPTSLGNLKEL 146

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE------------------------- 222
           + LDL  NN+  LP  +  +  L+ L+V+ N +E+                         
Sbjct: 147 KVLDLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPDRCSGVEEFRRYWELVEILEKY 206

Query: 223 -----------------LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
                            +P TIGQ   ++++R+  N L  LP+ V  +  L+ + +  N 
Sbjct: 207 KDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNNLSTLPDEVKDMEQLQEIDLSCNK 266

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNL 324
           +   P ++  L+ L  LD+S N + S+P  +C  + L K+NI GNN      LP ++G +
Sbjct: 267 LVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSLSHLQKLNISGNNIG---VLPLAMGEM 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
             L  L++    I  LP     +S L VL +  N +   PR
Sbjct: 324 TELTSLEMRRIGIEFLPPELGNVSNLEVLDLTGNHITSIPR 364



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 75/278 (26%), Positives = 131/278 (47%), Gaps = 32/278 (11%)

Query: 67   CVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
            C   D     L+ + S+I  S     + LNL N  +     LP+ +GKL+ L  L+LS N
Sbjct: 911  CEEMDLSSKQLVYIPSMI--SQYTHLKKLNLHNNYL---SALPEEVGKLTDLEELNLSRN 965

Query: 127  RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            +   +P+ I  LS L  LD+  N++  +   IG++  +   DL  N IS +    +   +
Sbjct: 966  KFPELPSIILNLSKLSMLDVSDNQLSVVSSDIGNIKEV---DLSHNSISIITNETNHSYK 1022

Query: 187  LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
            L +LD+  N L+S  +++G    L++L +  N+++ +   I Q   L  L ++ N +K +
Sbjct: 1023 LTKLDVSKNRLTSFRENVGMFEKLQQLNISINEIKSI-DGIHQLCMLTYLNIENNPIKQI 1081

Query: 247  PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE------------------ 288
            P+ + K+ TL VL    N +  LP++++ L  L ++D+S NE                  
Sbjct: 1082 PQEISKLKTLTVLKASNNYLTALPSSIAHLVELLDVDLSHNEVTRIPKEIESLEKLTTLN 1141

Query: 289  -----LESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
                 LES+P  L     L  + +  N   +  +P +I
Sbjct: 1142 LCSNKLESLPRELGQLPALKDIRLDGNPDYIGDVPSAI 1179



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 47/293 (16%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +DLS +    +   I   + + K+ L  N++   PD I  L  L  L + GN++  +P+ 
Sbjct: 12  MDLSGHGFTYIGTGICEYNHVTKIRLDDNKLTTFPD-IKSLTQLEELSVSGNELKEIPMC 70

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  LV L  L+L  NN+ S+   IG L  LK L ++ NDL  +P  I +  SL+ L +  
Sbjct: 71  VYELVNLVLLNLNDNNIKSMSSKIGKLSQLKCLQMKGNDLSSVPDEISELLSLQSLELSN 130

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA- 299
           N +  +P ++G +  L+VL ++ NNI+ LP  +  +  L +L V  N +E  P   C   
Sbjct: 131 NSMLQVPTSLGNLKELKVLDLQDNNIRVLPRQLKDIELLEDLLVKNNPIEDPPPDRCSGV 190

Query: 300 ------------------TTLVKMNI------------------------GNNFADLRAL 317
                             TT +++++                        GNN   L  L
Sbjct: 191 EEFRRYWELVEILEKYKDTTCIEIDLRDKGLTYIPATIGQYGHIKKIRLSGNN---LSTL 247

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P  + ++E L+E+D+S N++   P S   L+RL VL + EN +   P  I  +
Sbjct: 248 PDEVKDMEQLQEIDLSCNKLVHFPPSLMKLTRLSVLDLSENAMTSLPNEICSL 300



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 5/60 (8%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            +P  I  L  L +L+L  N++ ++P  +G L +LK + L  N     PD IGD+ S +YL
Sbjct: 1127 IPKEIESLEKLTTLNLCSNKLESLPRELGQLPALKDIRLDGN-----PDYIGDVPSAIYL 1181


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  141 bits (355), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 145/253 (57%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL+ N+   +P  IG L +L++L+L  N++  LP  IG L +L  L
Sbjct: 63  LPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++  P  + +L  L++L+L  N L++L   IG L SL+KL ++ N L+ LP+ I
Sbjct: 123 ILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LPE +G++  L+ L +  N +  LP  +  L +L+ L    N
Sbjct: 183 GQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           EL ++P+ +     L ++ + +N   L  LP+ IG L+ L+     NNQ+ +LP     L
Sbjct: 243 ELTTLPKEIGQLENLQELYLNDN--QLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQL 300

Query: 348 SRLRVLRVQENPL 360
             L+ L++  N L
Sbjct: 301 QNLQWLKLNNNQL 313



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 137/250 (54%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++  +P  I  L +LK LDL  N+   LP  IG L +L  L+L  NQ+  LP  
Sbjct: 53  LNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ L L  N L++ P  IG L +L+KL ++ N L  L   IGQ  SL++L +D 
Sbjct: 113 IGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDK 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRLKALP  +G++  L+ L +  N +  LP  +  L +L+ L +  N+L  +P+ +    
Sbjct: 173 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +   NN  +L  LP+ IG LE L+EL +++NQ+  LP     L  L+      N L
Sbjct: 233 NLKLLYSVNN--ELTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQL 290

Query: 361 EVPPRNIVEM 370
            + P+ I ++
Sbjct: 291 TMLPQEIGQL 300



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 107/187 (57%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  IG+L +L  L+L  N++  +   IG L SL+KL+L  NR+  LP+ IG L +L  L 
Sbjct: 133 PQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELY 192

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L  NQ++ LP  + +L  L+ L LG N L+ LP  IG L +LK L    N+L  LP  IG
Sbjct: 193 LSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIG 252

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q  +L+EL ++ N+L  LP+ +G++  L+      N +  LP  +  L +L+ L ++ N+
Sbjct: 253 QLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWLKLNNNQ 312

Query: 289 LESVPES 295
           L S  E 
Sbjct: 313 LSSQEEE 319



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ LDL +N   +LP  IG L +L++
Sbjct: 39  DLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L++ YN +  L   
Sbjct: 99  LNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L SL++L++  N L+++P  +     L ++ + NN   L  LP  IG L+ L+ L +
Sbjct: 159 IGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNN--QLTILPEEIGQLKNLQALIL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+ +LP     L  L++L    N L   P+ I ++
Sbjct: 217 GDNQLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQL 254



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/69 (37%), Positives = 41/69 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L++N++  +P  IG L +L+      N++  LP  IG L +L +L
Sbjct: 247 LPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPQEIGQLQNLQWL 306

Query: 168 DLRGNQISA 176
            L  NQ+S+
Sbjct: 307 KLNNNQLSS 315


>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
 gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
          Length = 336

 Score =  141 bits (355), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 150/286 (52%), Gaps = 25/286 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD----------- 156
           LP  IG+L +L  L+L EN + A P  IG L +L+ L+L+ N++   P            
Sbjct: 20  LPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLAL 79

Query: 157 ------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                        IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L +LP+ I
Sbjct: 80  YLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEI 139

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  L   IGQ  +L+EL ++YN+L  LP  +G++  L+ L +  N
Sbjct: 140 GQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNN 199

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K L   +  L +L+ LD+ +N+ + +P  +     L  + + NN   L  L + IG L
Sbjct: 200 QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNN--QLTTLSKEIGRL 257

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +S NQ+ +LP+    L  L+VL +  N L+   + I ++
Sbjct: 258 QNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQLKTLSKEIGQL 303



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 131/240 (54%), Gaps = 2/240 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  ++  +P  IG L +L  L+L  N +   P  IG L +L  L+L  NQ+   P  
Sbjct: 10  LYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKE 69

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L  L L +N L +L   IG L +L++L +  N L  LP+ IGQ  +L+ L ++ 
Sbjct: 70  IGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNN 129

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LPE +G++  L+ L++  N +  L   +  L +L+EL +++N+L  +P  +    
Sbjct: 130 NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLK 189

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + NN   L+ L + IG L+ L+ LD+  NQ +++P+    L  L+VL +  N L
Sbjct: 190 NLQALELNNN--QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQL 247



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 123/203 (60%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L +L+L+ N+++ +P  IG L +L+ L+L  N+++ L   IG L +L  L
Sbjct: 112 LPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQEL 171

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  + +L  L+ L+L +N L +L   IG L +LK+L +  N  + +P+ I
Sbjct: 172 YLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 231

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L ++ N+L  L + +G++  L+ L + YN +  LP  +  L +L+ L+++ N
Sbjct: 232 EQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNN 291

Query: 288 ELESVPESLCFATTLVKMNIGNN 310
           +L+++ + +     L ++ + NN
Sbjct: 292 QLKTLSKEIGQLKNLKRLELNNN 314



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 65/184 (35%), Positives = 110/184 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L +L+L  N+++ +   IG L +L++L L+ N++  LP+ IG L +L  L
Sbjct: 135 LPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQAL 194

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  L   + +L  L+ LDLG N    +P+ I  L +L+ L +  N L  L   I
Sbjct: 195 ELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEI 254

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+EL + YN+L  LP  +G++  L+VL +  N +K L   +  L +L+ L+++ N
Sbjct: 255 GRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQLKTLSKEIGQLKNLKRLELNNN 314

Query: 288 ELES 291
           +L S
Sbjct: 315 QLSS 318



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 116/209 (55%), Gaps = 2/209 (0%)

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           L + +L L G +++ LP  + +L  L +L+L  N L + P  IG L +L+ L +  N L+
Sbjct: 5   LDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLK 64

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
             P  IGQ  +L  L ++ N+L  L + +G++  L+ L + YN +  LP  +  L +L+ 
Sbjct: 65  TFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQA 124

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L+++ N+L ++PE +     L  +N+ NN   L  L + IG L+ L+EL ++ NQ+ +LP
Sbjct: 125 LELNNNQLMTLPEEIGQLKNLQTLNLWNN--QLMTLSKGIGQLKNLQELYLNYNQLTILP 182

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +    L  L+ L +  N L+   + I ++
Sbjct: 183 NEIGQLKNLQALELNNNQLKTLSKEIGQL 211


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 120/203 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L++L  L +  N++V +P  IG L +L  L L+ N+++ELP  IG L  L  L
Sbjct: 133 LPKEIGNLTNLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALL 192

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN++  LP ++  L  LE L LG NNL  LPD I  L +L  L +E N L  LP  I
Sbjct: 193 YLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGI 252

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+++ +  NRL+ LP+ +G++  L+ L+++ N +++LP  +  L+SLRE D+  N
Sbjct: 253 GGLKKLKKMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENN 312

Query: 288 ELESVPESLCFATTLVKMNIGNN 310
            L ++PE +     L K+ + +N
Sbjct: 313 RLRNLPEEIGQLANLQKLYLEHN 335



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/251 (36%), Positives = 137/251 (54%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L LS +++ ++P +IG L  LK LDL+  ++I LP  IG+L +L  L
Sbjct: 87  LPEEIGELENLEILTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKL 146

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ+  LP  + +L  L  L L  N L  LP  IGSL  L  L +  N LE LP +I
Sbjct: 147 RVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSI 206

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L + YN LK LP+ + ++  L  L +  N +  LP  +  L  L+++ +  N
Sbjct: 207 GNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDN 266

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L ++N+ NN   LR LP  I  L  L E D+ NN++R LP+    L
Sbjct: 267 RLRKLPKEIGQLGNLQELNLKNN--RLRRLPEEIDQLTSLREFDLENNRLRNLPEEIGQL 324

Query: 348 SRLRVLRVQEN 358
           + L+ L ++ N
Sbjct: 325 ANLQKLYLEHN 335



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 160/322 (49%), Gaps = 34/322 (10%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           W    +   S L S+ L  + +  + + I    SLK+L +   ++ ELP+ IG+L +L  
Sbjct: 40  WQDALVHSSSGLKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEI 99

Query: 167 LDLRGNQISALPVA-----------------------LSRLVRLEELDLGSNNLSSLPDS 203
           L L G+++++LP +                       +  L  L +L +G N L  LP  
Sbjct: 100 LTLSGSKLTSLPKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLYKLRVGLNQLVELPKE 159

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L  L +  N L ELP  IG    L  L +  N+L+ LP+++G +  LE L + Y
Sbjct: 160 IGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGY 219

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           NN+K LP  +  L++L  L +  N+L ++P  +     L KM + +N   LR LP+ IG 
Sbjct: 220 NNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDN--RLRKLPKEIGQ 277

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L  L+EL++ NN++R LP+    L+ LR   ++ N L   P    E+G  A +Q +  L 
Sbjct: 278 LGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPE---EIGQLANLQKLY-LE 333

Query: 384 EKRDAKTQPVKQKK--SWVEMC 403
             R +K    KQ+K   W+  C
Sbjct: 334 HNRFSK---AKQRKIRQWLPKC 352


>gi|418691224|ref|ZP_13252327.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359628|gb|EJP15613.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 267

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 138/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L  L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++ +N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDSN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 131/234 (55%), Gaps = 2/234 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +  +E LP  IG   +L  L+L  N++ ++P  IG L  L+ L+L  N+   LP  IG L
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQL 62

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL GNQ ++LP  + +L  L  L+L  N L+SLP  IG L +L++L +  N   
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +D+NR    P+ + +  +L+ L +  + +K LP  +  L +L+ 
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 182

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +  N+L S+P+ +     L ++N+ +N   L+ LP+ IG L+ L+ L + +N
Sbjct: 183 LHLDSNQLTSLPKEIGQLQNLFELNLQDN--KLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ   LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 86/157 (54%), Gaps = 3/157 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL     + +  LP  IG+L +L  LDL+ N+  ++P  IG L  L+ L
Sbjct: 81  EIGQLQNLRVLNLAG---NQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 137

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR    P  I    SL +L L G+Q+  LP  +  L  L+ L L SN L+SLP  I
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEI 197

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           G L +L +L ++ N L+ LP  IGQ  +L+ LR+  N
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 58/130 (44%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L  LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD+  NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|195061568|ref|XP_001996020.1| GH14049 [Drosophila grimshawi]
 gi|193891812|gb|EDV90678.1| GH14049 [Drosophila grimshawi]
          Length = 744

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 100/280 (35%), Positives = 154/280 (55%), Gaps = 12/280 (4%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I  L +L  L L +N +V++P  IG L  L +L+L  N++ ELP     L  L +L++  
Sbjct: 230 IENLLTLTVLQLHDNALVSLPPEIGKLEKLVRLNLSHNKLSELPAEFYSLPELRHLNISH 289

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N+   L   +S L  LE LD G+NN++++P  IG L+ L  L++  N ++ELP  I    
Sbjct: 290 NEFLELNPDISNLHMLEFLDAGNNNINTVPGGIGFLVRLTALLLANNHIKELPTDIVNMR 349

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL++L +  N L ALPE +G +  LE L V++N+IK+LP T      L EL  S N +ES
Sbjct: 350 SLQKLDLMKNDLIALPEDMGLMRKLECLYVQHNDIKELP-TFEGNEMLSELHASNNFIES 408

Query: 292 VPESLCFATTLVKMNIGNNFADLR-----ALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           VP+ LC     +K+       DLR      LP  I  +  L  LD++NN I VLP +   
Sbjct: 409 VPQDLCANLPHLKI------FDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSS 462

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           L+ L  L+V  NP++   R+I++ G   +++ + D  + +
Sbjct: 463 LAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAK 502



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 89/326 (27%), Positives = 151/326 (46%), Gaps = 60/326 (18%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           ++I+ LP  I  + SL  LDL +N ++A+P  +G +  L+ L +  N I ELP       
Sbjct: 336 NHIKELPTDIVNMRSLQKLDLMKNDLIALPEDMGLMRKLECLYVQHNDIKELPTFEGNEM 395

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           D   +L  L   DLR N+I+ LP  +  +  L  LDL +N++S 
Sbjct: 396 LSELHASNNFIESVPQDLCANLPHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISV 455

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA-------------- 245
           LP ++ SL  L  L V+ N ++ +   I QC + R L+  ++R +A              
Sbjct: 456 LPVTLSSLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKIREEGGADEEAPC 515

Query: 246 --------------LPEAVG---KIHTLEVLSVRYNNIKQLPTTMSSLSS---LRELDVS 285
                         LP  +    K+     L+V   N+  +P  +  L+S   +  +D +
Sbjct: 516 SSRSSTGSQGAMNNLPNNMTDRYKLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFA 575

Query: 286 FNELESVPESLCFATTLV-KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
            N+L S+P+ L   + LV ++ + +N   + ++P  I     +  L++SNNQIR LP+ F
Sbjct: 576 RNQLGSLPQGLQLMSNLVTELVLAHNV--IASVPTFITQFTRITFLNLSNNQIRDLPNEF 633

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
            +L+ LR L +  N  E  P+ + E+
Sbjct: 634 GVLNTLRELNIANNRFEFLPKGLYEL 659



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 145/339 (42%), Gaps = 62/339 (18%)

Query: 105 IEWLP-DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           IE +P D    L  L   DL +N+I  +P  I  + +L +LDL  N I  LP ++  L  
Sbjct: 406 IESVPQDLCANLPHLKIFDLRDNKITQLPDEICLMRNLNRLDLTNNSISVLPVTLSSLAH 465

Query: 164 LVYLDLRGNQISA-----LPVALSRLVRL----------------EELDLGSNN------ 196
           L+ L + GN I       L    +R+++                 EE    S +      
Sbjct: 466 LISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKIREEGGADEEAPCSSRSSTGSQG 525

Query: 197 -LSSLPDSIGSLISLKK---LIVETNDLEELPHTIGQCSSLRELRV-DY--NRLKALPEA 249
            +++LP+++     L+    L V   +L  +P  + Q +S   + V D+  N+L +LP+ 
Sbjct: 526 AMNNLPNNMTDRYKLRHTRTLAVNLENLTNVPEHVFQLASSENVHVVDFARNQLGSLPQG 585

Query: 250 VGKIHTLEV-LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           +  +  L   L + +N I  +PT ++  + +  L++S N++  +P       TL ++NI 
Sbjct: 586 LQLMSNLVTELVLAHNVIASVPTFITQFTRITFLNLSNNQIRDLPNEFGVLNTLRELNIA 645

Query: 309 NNFADLRALPRSIGNLEMLE------------------------ELDISNNQIRVLPDSF 344
           NN  +   LP+ +  L+ LE                         LD+ NN I  +P   
Sbjct: 646 NNRFEF--LPKGLYELQGLEILIASENHIKALNVDGLKGMPRLSTLDLRNNDIEFIPPIL 703

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
             L+ +  L +  NP   P   I+  G  A++ Y+ D +
Sbjct: 704 GNLTNITHLELVGNPFRQPRHQILMKGTDAIMSYLRDRI 742


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L K+ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQKLYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 42/305 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            DL                        LSL Y D       + P  + +   L  L+L  
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYD 385

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
              S+LP  I  L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++ 
Sbjct: 386 CGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR 445

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS+  N +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L
Sbjct: 446 NLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QL 503

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             L   IG L+ L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G   
Sbjct: 504 TNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQ 560

Query: 375 VVQYM 379
            +Q++
Sbjct: 561 NLQWL 565



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 103/182 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  L   I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L +  N
Sbjct: 511 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 288 EL 289
           +L
Sbjct: 571 QL 572



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/243 (32%), Positives = 130/243 (53%), Gaps = 6/243 (2%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L   ++  LP  IG L +L  L+L+ N ++ LP  + +L  L+ELDL  N L++ P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L  L+ L +  N L  LP+ IG+  +L++L +  N+L   P+ +G++  L+ L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+  N+   +P+ +     L  +N+ +N   L  LP  IG 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDN--QLATLPVEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L+ L++L + NN++ V P     L  L++L   EN L   P+   EMG    +Q + +LV
Sbjct: 231 LQNLQKLYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPK---EMGQLQNLQTL-NLV 286

Query: 384 EKR 386
             R
Sbjct: 287 NNR 289



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/219 (30%), Positives = 122/219 (55%), Gaps = 2/219 (0%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L+
Sbjct: 38  MDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQ 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P 
Sbjct: 98  ELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L+
Sbjct: 158 EIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 216 LSDNQLATLPVEIGQLQNLQKLYLRNNRLTVFPKEIGQL 254



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  140 bits (354), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 161/303 (53%), Gaps = 12/303 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L  L+ L +  N L + P
Sbjct: 258 LDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 365 RNI 367
           + I
Sbjct: 316 QEI 318



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 152/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L LR N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 133/251 (52%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L L +NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLYLNNN 355



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 105/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +  S
Sbjct: 356 QFSS 359



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/230 (33%), Positives = 124/230 (53%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  NR+  +   I  L +LK LDL  N++  LP+ I  L +L  L
Sbjct: 130 LPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ +  P  + +L  L+ L L +N ++ LP+ I  L  L+ L +  N L  LP  I
Sbjct: 190 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L + YN+L  LP+ VG++  L+ L +R N +K LP  +  L +L+ L +S N
Sbjct: 250 EQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  +P+ +     L+ +++   +  L  LP  I  L+ L+ L ++NNQ 
Sbjct: 310 QLTILPQEIGKLKNLLWLSLV--YNQLTTLPNEIEQLKNLQTLYLNNNQF 357


>gi|410449672|ref|ZP_11303725.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410016429|gb|EKO78508.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 355

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 105/280 (37%), Positives = 156/280 (55%), Gaps = 7/280 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++++ K  R+L+L++   + +  LP  IG+L +L SLDLS N +  +P  IG L +LKKL
Sbjct: 63  QIANLKNLRELDLRD---NQLTTLPKEIGQLHNLQSLDLSSNSLSTLPEEIGHLKNLKKL 119

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISA--LPVALSRLVRLEELDLGSNNLSSLPD 202
           DLH N +I LP++IG L +L  LDL  N+ +   L   +  L  LE+LDL  N+LS+LP 
Sbjct: 120 DLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSENSLSTLPK 179

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L  L+ L +  N L  LP  IG+   LREL +  NRLK LP+ +GK+  L  L + 
Sbjct: 180 EIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQCLHSLDLS 239

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N++  LP  +  L  L  LD+S N L ++P+ +     L  +++  N   L  LP+ I 
Sbjct: 240 ENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLSEN--SLTTLPKEIA 297

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            L+ L +LD+  N +  LP        L  L ++EN   V
Sbjct: 298 KLQNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKENSFSV 337



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/265 (36%), Positives = 143/265 (53%), Gaps = 4/265 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP  I  L +L  LDL +N++  +P  IG L +L+ LDL +N +  LP+ IG L +L
Sbjct: 57  IKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLSTLPEEIGHLKNL 116

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLS--SLPDSIGSLISLKKLIVETNDLEE 222
             LDL  N +  LP  + RL  LE LDL +N  +   L + IG L SL+KL +  N L  
Sbjct: 117 KKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSENSLST 176

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+   L+ L +  N L  LP+ +GK+  L  LS++ N +K LP  +  L  L  L
Sbjct: 177 LPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQCLHSL 236

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N L ++P+ +     L  +++  N   L  LP+ IG L+ L  LD+S N +  LP 
Sbjct: 237 DLSENSLTTLPKEIGKLQCLHSLDLSEN--SLTTLPKEIGKLQNLSNLDLSENSLTTLPK 294

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
               L  L  L +++N L   P+ I
Sbjct: 295 EIAKLQNLYDLDLRKNSLTTLPKEI 319



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 126/229 (55%), Gaps = 4/229 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL   +I  LP  I +L +L  LDLR NQ++ LP  + +L  L+ LDL SN+LS+LP+ 
Sbjct: 50  LDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLSTLPEE 109

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR--LKALPEAVGKIHTLEVLSV 261
           IG L +LKKL +  N L  LP  IG+  +L  L +  NR     L E +G + +LE L +
Sbjct: 110 IGHLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDL 169

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N++  LP  +  L  L+ LD+S N L  +P+ +     L ++++  N   L+ LP+ I
Sbjct: 170 SENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGN--RLKTLPKEI 227

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L+ L  LD+S N +  LP     L  L  L + EN L   P+ I ++
Sbjct: 228 GKLQCLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKL 276


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  140 bits (354), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 131/253 (51%), Gaps = 25/253 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L +L+L  N+   +P  IG L SL++L L  N++  LP  +G L +L   
Sbjct: 59  LPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVF 118

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L  L+ LDL +N L++LP  +G L +L  L +  N L  LP   
Sbjct: 119 ELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKET 178

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +LR L +  N L  LP  +G++  L  L++ YN +  LP  +  L SLREL +  N
Sbjct: 179 GQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDN 238

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L                         + LP+ IG L+ L EL + +NQ+  +P     L
Sbjct: 239 QL-------------------------KTLPKEIGQLKNLRELLLRHNQLTTVPKEIGQL 273

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 274 KKLRWLLLDANPI 286



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 131/250 (52%), Gaps = 25/250 (10%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS+ ++  +P  IG L +L+ L+L  N+   LP+ IG L SL  L L  NQ++ LP  
Sbjct: 49  LNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKE 108

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+  +L +N L++LP  IG L +L+ L +  N L  LP  +GQ  +L +L +  
Sbjct: 109 VGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHD 168

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+  G++  L +L++  N +  LP  +  L  L  L++++N+L +         
Sbjct: 169 NKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTT--------- 219

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                           LP+ IG L+ L EL + +NQ++ LP     L  LR L ++ N L
Sbjct: 220 ----------------LPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHNQL 263

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 264 TTVPKEIGQL 273



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 118/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ L+L +N  ++LP+ IG L SL++
Sbjct: 35  DLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRE 94

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  +GQ  +L+   ++ N+L  LP  +GK+  L+ L +  N +  LP  
Sbjct: 95  LYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKE 154

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L +L +  N+L ++P+       L  +N+  N   L  LP  IG L+ L  L++
Sbjct: 155 VGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNL--LTILPNEIGQLKKLLSLNL 212

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + NQ+  LP     L  LR L + +N L+  P+ I ++
Sbjct: 213 TYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQL 250


>gi|124006156|ref|ZP_01690992.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988333|gb|EAY27986.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 755

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 150/261 (57%), Gaps = 2/261 (0%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +LPD + +L  L +L L+   I   P  I  ++SLKKL ++   +  + ++I +L++L  
Sbjct: 186 YLPDQLDQLKYLETLYLNNCSIDEFPKVISRITSLKKLQVYHCALPNIDENISNLVNLEE 245

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L +   +++ LPV+L +L  ++ L++    L++LP+ +G   SL +L V  N++  LP +
Sbjct: 246 LRIASARLTQLPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDS 305

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +GQ + L+ L V  N L  LP ++     L VL ++ N IK LP  +  L+ L   +V  
Sbjct: 306 LGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEH 365

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L S+PES+   +TL  + + NN+  L +LP+ +G L  L  L ++NNQ+  LP+S   
Sbjct: 366 NQLGSLPESIAEISTLGNLFLNNNY--LTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVR 423

Query: 347 LSRLRVLRVQENPLEVPPRNI 367
           L  LR L ++ N L + P+NI
Sbjct: 424 LVNLRYLLLKRNKLRMLPKNI 444



 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/260 (35%), Positives = 145/260 (55%), Gaps = 3/260 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IGKL+ L S ++  N++ ++P +I  +S+L  L L+ N +  LP  +G L 
Sbjct: 343 NQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLS 402

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ++ LP ++ RLV L  L L  N L  LP +IG   +L+ + +  N  + 
Sbjct: 403 CLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDH 462

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS-LRE 281
           +P T+     L+ + +  NR+  +P  VGK   L  L+V  N I+ LP ++  L + L  
Sbjct: 463 IPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLAS 522

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L ++ N+L  VPE +     LV +++ +N   L  LP SI  LE L+EL ++NNQ++ LP
Sbjct: 523 LHLAKNQLTQVPEEIGNLLHLVTLDLSHN--QLTELPTSITQLENLQELYLNNNQLKALP 580

Query: 342 DSFRMLSRLRVLRVQENPLE 361
            +   L  LRVL+V  N L+
Sbjct: 581 AALSRLKNLRVLKVDHNQLK 600



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 147/284 (51%), Gaps = 22/284 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LPDS+G+L+ L +LD+S N +  +P ++     L  L +  N+I  LP  IG L 
Sbjct: 297 NEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLA 356

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L   ++  NQ+ +LP +++ +  L  L L +N L+SLP  +G L  L  L V  N L +
Sbjct: 357 HLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQ 416

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++ +  +LR L +  N+L+ LP+ +G+   LEV+++ +N    +P T+  L  L+ +
Sbjct: 417 LPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGV 476

Query: 283 DVSFNELESVPESLCFATTLVKMNI---------------GNNFADLR-------ALPRS 320
           ++  N +  +P ++  AT L  +N+               G + A L         +P  
Sbjct: 477 NIRNNRVAFIPSNVGKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEE 536

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           IGNL  L  LD+S+NQ+  LP S   L  L+ L +  N L+  P
Sbjct: 537 IGNLLHLVTLDLSHNQLTELPTSITQLENLQELYLNNNQLKALP 580



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 142/261 (54%), Gaps = 3/261 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+  SL  L+++ N I A+P ++G L+ LK LD+  N +  LP+S+     L  L
Sbjct: 279 LPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTLDVSNNLLNRLPNSMTACKLLTVL 338

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            ++ NQI  LP  + +L  L   ++  N L SLP+SI  + +L  L +  N L  LP  +
Sbjct: 339 HIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESIAEISTLGNLFLNNNYLTSLPKQL 398

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L  L V+ N+L  LPE++ ++  L  L ++ N ++ LP  +    +L  ++++ N
Sbjct: 399 GQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRNKLRMLPKNIGQWRNLEVINLNHN 458

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF-RM 346
           + + +PE+L     L  +NI NN      +P ++G    L  L++S N IRVLP S  ++
Sbjct: 459 QFDHIPETLFDLPKLQGVNIRNNRVAF--IPSNVGKATNLRNLNVSENCIRVLPASIGKL 516

Query: 347 LSRLRVLRVQENPLEVPPRNI 367
            + L  L + +N L   P  I
Sbjct: 517 GTHLASLHLAKNQLTQVPEEI 537



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 151/273 (55%), Gaps = 2/273 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP S+GKL ++  L++S   +  +P  +G   SL +L++  N I  LPDS+G L  L  L
Sbjct: 256 LPVSLGKLPAIKYLEVSGALLTTLPNILGQCFSLDQLNVANNEIRALPDSLGQLTQLKTL 315

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+  N ++ LP +++    L  L + +N + +LP  IG L  L    VE N L  LP +I
Sbjct: 316 DVSNNLLNRLPNSMTACKLLTVLHIKNNQIKTLPADIGKLAHLTSFNVEHNQLGSLPESI 375

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S+L  L ++ N L +LP+ +G++  L +L V  N + QLP +M  L +LR L +  N
Sbjct: 376 AEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYLLLKRN 435

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+++     L  +N+ +N  D   +P ++ +L  L+ ++I NN++  +P +    
Sbjct: 436 KLRMLPKNIGQWRNLEVINLNHNQFD--HIPETLFDLPKLQGVNIRNNRVAFIPSNVGKA 493

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           + LR L V EN + V P +I ++G      ++A
Sbjct: 494 TNLRNLNVSENCIRVLPASIGKLGTHLASLHLA 526



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 148/262 (56%), Gaps = 3/262 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SI ++S+L +L L+ N + ++P  +G LS L  L ++ N++ +LP+S+  L++L YL
Sbjct: 371 LPESIAEISTLGNLFLNNNYLTSLPKQLGQLSCLTMLYVNNNQLTQLPESMVRLVNLRYL 430

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N++  LP  + +   LE ++L  N    +P+++  L  L+ + +  N +  +P  +
Sbjct: 431 LLKRNKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNV 490

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHT-LEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           G+ ++LR L V  N ++ LP ++GK+ T L  L +  N + Q+P  + +L  L  LD+S 
Sbjct: 491 GKATNLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSH 550

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L  +P S+     L ++ + NN   L+ALP ++  L+ L  L + +NQ++ L      
Sbjct: 551 NQLTELPTSITQLENLQELYLNNN--QLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQ 608

Query: 347 LSRLRVLRVQENPLEVPPRNIV 368
           L  L++L    N LE  P N  
Sbjct: 609 LPFLKILTAAHNQLETLPVNFT 630



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 158/279 (56%), Gaps = 8/279 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP +IG+  +L  ++L+ N+   +P T+  L  L+ +++  NR+  +P ++G   
Sbjct: 435 NKLRMLPKNIGQWRNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKAT 494

Query: 163 SLVYLDLRGNQISALPVALSRL-VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           +L  L++  N I  LP ++ +L   L  L L  N L+ +P+ IG+L+ L  L +  N L 
Sbjct: 495 NLRNLNVSENCIRVLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLT 554

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP +I Q  +L+EL ++ N+LKALP A+ ++  L VL V +N +K+L   +  L  L+ 
Sbjct: 555 ELPTSITQLENLQELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKI 614

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L  + N+LE++P +   ++ L ++ + +N   L  LP  +G+L  L  LD+  N +  LP
Sbjct: 615 LTAAHNQLETLPVNFTRSSQLHQLVLSHN--QLNVLPSDMGDLNNLVLLDLQGNVLTDLP 672

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +S +   +L+ L + +N L    ++I   G Q  +QY+A
Sbjct: 673 ESLKQCRKLKKLLLNDNQL----KSIKVEGWQE-LQYLA 706



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 154/288 (53%), Gaps = 20/288 (6%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R+L + N   +  + +P+++  L  L  +++  NR+  +P+ +G  ++L+ L++  N I 
Sbjct: 448 RNLEVINLNHNQFDHIPETLFDLPKLQGVNIRNNRVAFIPSNVGKATNLRNLNVSENCIR 507

Query: 153 ELPDSIGDL-LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
            LP SIG L   L  L L  NQ++ +P  +  L+ L  LDL  N L+ LP SI  L +L+
Sbjct: 508 VLPASIGKLGTHLASLHLAKNQLTQVPEEIGNLLHLVTLDLSHNQLTELPTSITQLENLQ 567

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L +  N L+ LP  + +  +LR L+VD+N+LK L + + ++  L++L+  +N ++ LP 
Sbjct: 568 ELYLNNNQLKALPAALSRLKNLRVLKVDHNQLKELSKGLDQLPFLKILTAAHNQLETLPV 627

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADL-------RALPRSIGN 323
             +  S L +L +S N+L  +P  +     LV +++ GN   DL       R L + + N
Sbjct: 628 NFTRSSQLHQLVLSHNQLNVLPSDMGDLNNLVLLDLQGNVLTDLPESLKQCRKLKKLLLN 687

Query: 324 -----------LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                       + L+ L + NNQI VLP++   L  LR L +  NP+
Sbjct: 688 DNQLKSIKVEGWQELQYLALKNNQIAVLPENLHQLIGLRTLYLNNNPI 735


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L++  N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSSLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 148/305 (48%), Gaps = 42/305 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSS 329

Query: 159 GDL------------------------LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            DL                        LSL Y D       + P  + +   L  L+L  
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYD 385

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
              S+LP  I  L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++ 
Sbjct: 386 CGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLR 445

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS+  N +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L
Sbjct: 446 NLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QL 503

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             L   IG L+ L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G   
Sbjct: 504 TNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQ 560

Query: 375 VVQYM 379
            +Q++
Sbjct: 561 NLQWL 565



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 102/182 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I  L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  L   I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L +  N
Sbjct: 511 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 288 EL 289
           +L
Sbjct: 571 QL 572



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 117/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N + ++P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLRNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185


>gi|418704583|ref|ZP_13265455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410765799|gb|EKR36494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 137/244 (56%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L  L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  ++LP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 81/234 (34%), Positives = 130/234 (55%), Gaps = 2/234 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +  +E LP  IG   +L  L+L  N++ ++P  IG L  L+ L+L  N+   LP  IG L
Sbjct: 3   LHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQL 62

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL GNQ + LP  + +L  L  L+L  N L+SLP  IG L +L++L +  N   
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IGQ   L  L +D+NR    P+ + +  +L+ L +  + +K LP  +  L +L+ 
Sbjct: 123 SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQS 182

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +  N+L S+P+ +     L ++N+ +N   L+ LP+ IG L+ L+ L + +N
Sbjct: 183 LHLDGNQLTSLPKEIGQLQNLFELNLQDN--KLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ   LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 85/157 (54%), Gaps = 3/157 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL     + +  LP  IG+L +L  LDL+ N+  ++P  IG L  L+ L
Sbjct: 81  EIGQLQNLRVLNLAG---NQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEAL 137

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR    P  I    SL +L L G+Q+  LP  +  L  L+ L L  N L+SLP  I
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEI 197

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           G L +L +L ++ N L+ LP  IGQ  +L+ LR+  N
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L  LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD++ NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|317491382|ref|ZP_07949818.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
 gi|316920929|gb|EFV42252.1| leucine Rich repeat protein [Enterobacteriaceae bacterium
           9_2_54FAA]
          Length = 297

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/286 (31%), Positives = 156/286 (54%), Gaps = 6/286 (2%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
            TR LNL N+ ++ +    D I   +SL  L +  N++ + P  IG LS L+ L++  N+
Sbjct: 15  NTRFLNLDNQQLECL----DGIELNASLTGLSVYNNQLSSYPEQIGMLSELQVLNISCNQ 70

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           + ++PDSIG L +L  LDL  N++S LP  + +L +L  L L +N+L+ +P +  +L +L
Sbjct: 71  MTKIPDSIGQLRALEMLDLGHNRLSELPDTMGKLTQLIYLYLSNNSLTDIPATFSALRNL 130

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           + L +  N L  +P  +   S+L ELR+  N++  L E + ++  L+ L +  N+  Q P
Sbjct: 131 RYLNITDNHLTAIPEAVFAMSALEELRLYNNKISVLAEKISELKNLQELHLMNNHFSQFP 190

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            ++  L+ LR LD+S N ++S+P+S      L  +N    F +L  +P +I  L  L+ L
Sbjct: 191 DSIGQLTQLRVLDISGNRIKSIPDSFAQLNHLQDLNF--RFNNLSEVPDTIAALTQLQTL 248

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           D+  N +  LP+S + L  L+ L ++ N     P  +  +  Q  +
Sbjct: 249 DLRANNLASLPESIQELKNLKRLDLRWNSFTTYPEQLASLVKQGCL 294



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 10/160 (6%)

Query: 58  VPIMIMCMCCVGQDGEKLSLI--KLASLIE-VSSKKGTRDLNLQNKLMDNIEWLPDSIGK 114
           +P  +  M  +    E+L L   K++ L E +S  K  ++L+L N   ++    PDSIG+
Sbjct: 143 IPEAVFAMSAL----EELRLYNNKISVLAEKISELKNLQELHLMN---NHFSQFPDSIGQ 195

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L+ L  LD+S NRI ++P +   L+ L+ L+   N + E+PD+I  L  L  LDLR N +
Sbjct: 196 LTQLRVLDISGNRIKSIPDSFAQLNHLQDLNFRFNNLSEVPDTIAALTQLQTLDLRANNL 255

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           ++LP ++  L  L+ LDL  N+ ++ P+ + SL+    LI
Sbjct: 256 ASLPESIQELKNLKRLDLRWNSFTTYPEQLASLVKQGCLI 295


>gi|296271631|ref|YP_003654262.1| hypothetical protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095806|gb|ADG91756.1| leucine-rich repeat protein [Arcobacter nitrofigilis DSM 7299]
          Length = 330

 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/276 (35%), Positives = 146/276 (52%), Gaps = 24/276 (8%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP+S G L +L  L LS NR+  +P  IG    LK L    N + E+P SIG L  L
Sbjct: 41  IRELPESFGVLQNLTVLKLSNNRLKKLPNCIGEFKYLKNLQCENNLLSEIPSSIGKLSKL 100

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + L+L GN++  LP  L  L  L  L L +N +  L   +G L  L    ++TN+L+ELP
Sbjct: 101 LILNLNGNRLEELPKELYDLKSLTRLTLAANKIKRLDVELGKLSKLLYFSLDTNELDELP 160

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS---------S 275
            +  +  SL  L V +N L  LP+++ +I  L+ L +  N I  LP+  S         S
Sbjct: 161 DSFSKMKSLYYLDVSFNNLTKLPKSISQIDELQTLLLEGNQIDDLPSLESHDMLIKLDLS 220

Query: 276 LSSLRELDVSFNELES-------------VPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            +SL+ LD + ++LE              +P+ +C  T L  +++ +N   L  LP++IG
Sbjct: 221 DNSLKSLDFNVSKLEDLKILILDNNFLVKLPDEVCDLTNLTNLSVSSN--SLIELPKNIG 278

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            L+ LEELDI +N +  LPDSF  L +L+ L + +N
Sbjct: 279 KLQNLEELDIEDNSVEKLPDSFFELKKLKNLYLADN 314


>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 374

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 25/286 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD----------- 156
           LP  IG+L +L  L+L EN + A P  IG L +L+ L+L+ N++   P            
Sbjct: 58  LPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLAL 117

Query: 157 ------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                        IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L +LP+ I
Sbjct: 118 YLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEI 177

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  L   IGQ  +L+EL ++YN+L  LP  +G++  L+ L +  N
Sbjct: 178 GQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNN 237

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K L   +  L +L+ LD+ +N+ + +P  +     L  + + NN   L  L + IG L
Sbjct: 238 QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNN--QLTTLSKEIGRL 295

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +S NQ   LP+    L  L+VL +  N L+   + I ++
Sbjct: 296 QNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQLKTLSKEIGQL 341



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 134/230 (58%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG+L +L  L L+ N++  +P  IG L +L+ L+L+ N+++ LP+ IG L +L  L
Sbjct: 127 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 186

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  L   + +L  L+EL L  N L+ LP+ IG L +L+ L +  N L+ L   I
Sbjct: 187 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEI 246

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN+ K +P  + ++  L+VL +  N +  L   +  L +L+EL +S+N
Sbjct: 247 GQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYN 306

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +  ++PE +     L  + + NN   L+ L + IG L+ L+ L++ NNQ+
Sbjct: 307 QFTTLPEEIGQLKNLQVLELNNN--QLKTLSKEIGQLKNLKRLELDNNQL 354



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L L N   + +  LP+ IG+L +L +L+L  N+++ +   IG L +L++L
Sbjct: 153 EIGQLKNLQALELNN---NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQEL 209

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++  LP+ IG L +L  L+L  NQ+  L   + +L  L+ LDLG N    +P+ I
Sbjct: 210 YLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 269

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  L   IG+  +L+EL + YN+   LPE +G++  L+VL +  N
Sbjct: 270 EQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNN 329

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +K L   +  L +L+ L++  N+L S
Sbjct: 330 QLKTLSKEIGQLKNLKRLELDNNQLSS 356



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  ++  +P  IG L +L  L+L  N +   P  IG L +L  L+L  NQ+   P  
Sbjct: 48  LYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKE 107

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L  L L +N L +L   IG L +L++L +  N L  LP+ IGQ  +L+ L ++ 
Sbjct: 108 IGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNN 167

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LPE +G++  L+ L++  N +  L   +  L +L+EL +++N+L  +P  +    
Sbjct: 168 NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLK 227

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + NN   L+ L + IG L+ L+ LD+  NQ +++P+    L  L+VL +  N L
Sbjct: 228 NLQALELNNN--QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQL 285

Query: 361 EVPPRNI 367
               + I
Sbjct: 286 TTLSKEI 292



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 122/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L ++I + L + +L L G +++ LP  + +L  L +L+L  N L + P  IG L +L+ 
Sbjct: 34  DLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRV 93

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+  P  IGQ  +L  L ++ N+L  L + +G++  L+ L + YN +  LP  
Sbjct: 94  LELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNE 153

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L+++ N+L ++PE +     L  +N+ NN   L  L + IG L+ L+EL +
Sbjct: 154 IGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNN--QLMTLSKGIGQLKNLQELYL 211

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + NQ+ +LP+    L  L+ L +  N L+   + I ++
Sbjct: 212 NYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQL 249



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 23/178 (12%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   I     +R L ++  +L  LP+ +G++  L  L++  N +   P  + 
Sbjct: 27  VEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIG 86

Query: 275 SLSSLRELDVSFNELESVPESLC-------------FATTLVKMNIGN---------NFA 312
            L +LR L+++ N+L++ P+ +                 TL K  IG          N+ 
Sbjct: 87  QLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSK-GIGQLKNLQELYLNYN 145

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L  LP  IG L+ L+ L+++NNQ+  LP+    L  L+ L +  N L    + I ++
Sbjct: 146 QLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQL 203


>gi|440798242|gb|ELR19310.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 641

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/293 (34%), Positives = 160/293 (54%), Gaps = 13/293 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LP  IG L  L  LDL  NR+  +P  I  L +L K+ L  N + ELPD +G L 
Sbjct: 347 NHIKELPREIGDLDKLEELDLEGNRLTGLPTEISKLKNLHKIYLSRNMLAELPDELGQLK 406

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ++ L  ++  L  L  LD+ SN L+ L  SI  L +L +L    N+L  
Sbjct: 407 SLEELFLNDNQLTNLG-SVVMLPGLRVLDISSNELTKLTPSIAMLTNLHELHASANELTN 465

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L   IGQ  +LR L  + N L +LP  +G + +L+ L++  N +K+LP  +  L+ L  L
Sbjct: 466 LVPEIGQLVNLRLLDFNDNMLNSLPAEIGNLTSLKKLNLGGNLLKELPPEIGKLTGLSCL 525

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +++N+L ++   +    +L ++N+  N   L  LP  +G+++ LE L  ++N I  LPD
Sbjct: 526 LLNYNKLTTLTSQIGSLLSLTELNLDEN--KLTELPTEMGSMKGLEVLTFNDNDINDLPD 583

Query: 343 SFRMLS----------RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           +   L           R+R+  + +NPLE  P+ I E G+QAV  Y+ D +++
Sbjct: 584 TLYNLDNLSSPLWLFLRIRLFGMDDNPLEDIPQEITEGGSQAVFNYLGDRLQE 636



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 8/239 (3%)

Query: 122 DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
           DL+   +  +P  IG L++LK L+L+ N++  LP +IG L +L  L L  N IS LP  L
Sbjct: 210 DLNRLEMTTLPDKIGLLTNLKILNLYDNKLTALPPAIGKLTNLTALGLNENSISTLPPEL 269

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            +L  L+ LDL  N L+++P  IG+L+    L ++ N +     ++ +   L  L + YN
Sbjct: 270 GKLKNLQMLDLRFNKLTAIPPEIGNLV----LDLQHNSISSFA-SVAKLEKLENLDIQYN 324

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
            L+ LP+ +G + +L+ L ++YN+IK+LP  +  L  L ELD+  N L  +P  +     
Sbjct: 325 NLETLPQGLGSLKSLKRLHLKYNHIKELPREIGDLDKLEELDLEGNRLTGLPTEISKLKN 384

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           L K+ +  N   L  LP  +G L+ LEEL +++NQ+  L  S  ML  LRVL +  N L
Sbjct: 385 LHKIYLSRNM--LAELPDELGQLKSLEELFLNDNQLTNL-GSVVMLPGLRVLDISSNEL 440


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVLPKEIGQL 300



 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 243 RLTVLPKEIGQLQNLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L +L   ENR+ A+P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 277 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 369 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 428

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 429 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 488

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 489 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 547

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 548 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 583



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|195583540|ref|XP_002081575.1| GD11090 [Drosophila simulans]
 gi|194193584|gb|EDX07160.1| GD11090 [Drosophila simulans]
          Length = 776

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/256 (37%), Positives = 140/256 (54%), Gaps = 6/256 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E +P +IG L  L  LDL+ N IV VP  I     L  LDL  N +  LPD+I  L+
Sbjct: 73  NNLESIPQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLI 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    +  LP    RLV L  L+L  NNL +LP S+  LI+L++L +  N+  E
Sbjct: 133 SLQELLLNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTE 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L    G   SL   + + N L  LP+++  +  LE L + +N + +LP+T+  L SLR L
Sbjct: 193 L----GMLKSLVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFL 248

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
               N+L  +P+ LC    L  +++ NN   L ALP++IGNL  ++ L++ NN I  LP 
Sbjct: 249 FADDNQLRQLPDELCSCQQLSVLSVANN--QLSALPQNIGNLSKMKVLNVVNNYINALPV 306

Query: 343 SFRMLSRLRVLRVQEN 358
           S   L  L  + + +N
Sbjct: 307 SMLNLVNLTSMWLSDN 322



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 106/184 (57%), Gaps = 4/184 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L +L  L+L  N ++ +P ++  L +L++LD+  N   EL    G L SL
Sbjct: 144 LEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTEL----GMLKSL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           V      N ++ LP ++S L +LEEL L  N L  LP +IG L SL+ L  + N L +LP
Sbjct: 200 VTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQLRQLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +  C  L  L V  N+L ALP+ +G +  ++VL+V  N I  LP +M +L +L  + +
Sbjct: 260 DELCSCQQLSVLSVANNQLSALPQNIGNLSKMKVLNVVNNYINALPVSMLNLVNLTSMWL 319

Query: 285 SFNE 288
           S N+
Sbjct: 320 SDNQ 323



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 116/237 (48%), Gaps = 17/237 (7%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + KLD     + + P+      +L  L L   ++ ALP  L     L  L + SNNL S+
Sbjct: 19  IDKLDYSNTPLTDFPEVWQHERTLEELYLSTTRLQALPPQLFYCQGLRVLHVNSNNLESI 78

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P +IGSL  L+ L +  N +  +P  I  C  L  L +  N L+ LP+A+  + +L+ L 
Sbjct: 79  PQAIGSLRQLQHLDLNRNLIVNVPEEIKSCKHLTHLDLSCNSLQRLPDAITSLISLQELL 138

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-FAD------ 313
           +    ++ LP     L +LR L++  N L ++P+S+     L +++IG N F +      
Sbjct: 139 LNETYLEFLPANFGRLVNLRILELRLNNLMTLPKSMVRLINLQRLDIGGNEFTELGMLKS 198

Query: 314 ----------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                     L  LP SI  LE LEEL +S+N++  LP +  ML  LR L   +N L
Sbjct: 199 LVTFKCESNGLTELPDSISYLEQLEELVLSHNKLIRLPSTIGMLRSLRFLFADDNQL 255


>gi|124009256|ref|ZP_01693936.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985138|gb|EAY25077.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 306

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 126/222 (56%), Gaps = 2/222 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
            +L L+ +++  +P  IG L +L+ L+L  N++  LP  I  L +L  LDL  NQI+ LP
Sbjct: 65  ATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLP 124

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            ++  L  L +LDL  N L +LP  IG L SL  L +  N L+ LP +IGQ   L+EL +
Sbjct: 125 ASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQELDI 184

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N L  LPEA+G +  L+VL +R N +  LP T+  L +LREL +S N L ++P  +  
Sbjct: 185 HKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTLPPQIGE 244

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
              L  + I +N   + +LP  I  L+ L++L I NN +  L
Sbjct: 245 LQGLWVLGIADN--RISSLPEEIRQLQSLQKLYICNNPVAAL 284



 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/200 (43%), Positives = 120/200 (60%), Gaps = 6/200 (3%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QNKL      LP  I +L +L  LDL +N+I  +PA+IG L SL KLDL+ N +  LP  
Sbjct: 94  QNKLTT----LPKEIMQLKALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQALPYE 149

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG L SL  L L  N++ ALP ++ +L  L+ELD+  N LS LP++IG+L +L+ L +  
Sbjct: 150 IGQLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAIGNLTNLQVLDLRQ 209

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L  LP TIGQ  +LREL +  NRL  LP  +G++  L VL +  N I  LP  +  L 
Sbjct: 210 NKLTSLPATIGQLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQ 269

Query: 278 SLRELDVSFNELES--VPES 295
           SL++L +  N + +  VP S
Sbjct: 270 SLQKLYICNNPVAALRVPRS 289



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/223 (37%), Positives = 125/223 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L +L +L+L +N++  +P  I  L +L+ LDL+ N+I  LP SIG L SL  L
Sbjct: 77  LPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIGALHSLHKL 136

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N + ALP  + +L  L  L L  N L +LP+SIG L  L++L +  N+L  LP  I
Sbjct: 137 DLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQELDIHKNELSVLPEAI 196

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  ++L+ L +  N+L +LP  +G++  L  L +  N +  LP  +  L  L  L ++ N
Sbjct: 197 GNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTLPPQIGELQGLWVLGIADN 256

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            + S+PE +    +L K+ I NN      +PRS G  ++ E L
Sbjct: 257 RISSLPEEIRQLQSLQKLYICNNPVAALRVPRSRGQAQIKEWL 299



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 140/259 (54%), Gaps = 26/259 (10%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L+ +++ +LP  IG L +L  L+LR N+++ LP  + +L  L+ LDL  N ++ LP SIG
Sbjct: 69  LNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPASIG 128

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           +L SL KL +  N L+ LP+ IGQ +SL  L ++ N+LKALPE++G++H           
Sbjct: 129 ALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLH----------- 177

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
                        L+ELD+  NEL  +PE++   T L  +++  N   L +LP +IG L+
Sbjct: 178 ------------HLQELDIHKNELSVLPEAIGNLTNLQVLDLRQN--KLTSLPATIGQLQ 223

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA-QAVVQYMADLVE 384
            L EL +S+N++  LP     L  L VL + +N +   P  I ++ + Q +      +  
Sbjct: 224 NLRELHLSSNRLTTLPPQIGELQGLWVLGIADNRISSLPEEIRQLQSLQKLYICNNPVAA 283

Query: 385 KRDAKTQPVKQKKSWVEMC 403
            R  +++   Q K W+  C
Sbjct: 284 LRVPRSRGQAQIKEWLPNC 302



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 109/206 (52%), Gaps = 2/206 (0%)

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           +Y  +   Q+  +  A    +    L L ++ L+ LP  IG L +L+ L +  N L  LP
Sbjct: 42  LYQSIFDKQLQKIEAAHLAYLNQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLP 101

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  +L+ L +  N++  LP ++G +H+L  L +  N ++ LP  +  L+SL  L +
Sbjct: 102 KEIMQLKALQILDLYDNQIAHLPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWL 161

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+L+++PES+     L +++I  N  +L  LP +IGNL  L+ LD+  N++  LP + 
Sbjct: 162 NENKLKALPESIGQLHHLQELDIHKN--ELSVLPEAIGNLTNLQVLDLRQNKLTSLPATI 219

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  LR L +  N L   P  I E+
Sbjct: 220 GQLQNLRELHLSSNRLTTLPPQIGEL 245


>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 379

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 148/286 (51%), Gaps = 25/286 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD----------- 156
           LP  IG+L +L  L+L EN + A P  IG L +L+ L+L+ N++   P            
Sbjct: 63  LPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKEIGQLKNLLAL 122

Query: 157 ------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                        IG L +L  L L  NQ++ LP  + +L  L+ L+L +N L +LP+ I
Sbjct: 123 YLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L  L   IGQ  +L+EL ++YN+L  LP  +G++  L+ L +  N
Sbjct: 183 GQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +K L   +  L +L+ LD+ +N+ + +P  +     L  + + NN   L  L + IG L
Sbjct: 243 QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNN--QLTTLSKEIGRL 300

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+EL +S NQ   LP+    L  L+VL +  N L+   + I ++
Sbjct: 301 QNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQLKTLSKEIGQL 346



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/230 (34%), Positives = 134/230 (58%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   IG+L +L  L L+ N++  +P  IG L +L+ L+L+ N+++ LP+ IG L +L  L
Sbjct: 132 LSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  L   + +L  L+EL L  N L+ LP+ IG L +L+ L +  N L+ L   I
Sbjct: 192 NLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YN+ K +P  + ++  L+VL +  N +  L   +  L +L+EL +S+N
Sbjct: 252 GQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +  ++PE +     L  + + NN   L+ L + IG L+ L+ L++ NNQ+
Sbjct: 312 QFTTLPEEIGQLKNLQVLELNNN--QLKTLSKEIGQLKNLKRLELDNNQL 359



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 118/207 (57%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L L N   + +  LP+ IG+L +L +L+L  N+++ +   IG L +L++L
Sbjct: 158 EIGQLKNLQALELNN---NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQEL 214

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++  LP+ IG L +L  L+L  NQ+  L   + +L  L+ LDLG N    +P+ I
Sbjct: 215 YLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEI 274

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N L  L   IG+  +L+EL + YN+   LPE +G++  L+VL +  N
Sbjct: 275 EQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNN 334

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +K L   +  L +L+ L++  N+L S
Sbjct: 335 QLKTLSKEIGQLKNLKRLELDNNQLSS 361



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/247 (31%), Positives = 133/247 (53%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L+  ++  +P  IG L +L  L+L  N +   P  IG L +L  L+L  NQ+   P  
Sbjct: 53  LYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRVLELNNNQLKTFPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L  L L +N L +L   IG L +L++L +  N L  LP+ IGQ  +L+ L ++ 
Sbjct: 113 IGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNN 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LPE +G++  L+ L++  N +  L   +  L +L+EL +++N+L  +P  +    
Sbjct: 173 NQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLK 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + NN   L+ L + IG L+ L+ LD+  NQ +++P+    L  L+VL +  N L
Sbjct: 233 NLQALELNNN--QLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQL 290

Query: 361 EVPPRNI 367
               + I
Sbjct: 291 TTLSKEI 297



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 122/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L ++I + L + +L L G +++ LP  + +L  L +L+L  N L + P  IG L +L+ 
Sbjct: 39  DLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRV 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+  P  IGQ  +L  L ++ N+L  L + +G++  L+ L + YN +  LP  
Sbjct: 99  LELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+ L+++ N+L ++PE +     L  +N+ NN   L  L + IG L+ L+EL +
Sbjct: 159 IGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNN--QLMTLSKGIGQLKNLQELYL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + NQ+ +LP+    L  L+ L +  N L+   + I ++
Sbjct: 217 NYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQL 254



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 81/178 (45%), Gaps = 23/178 (12%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   I     +R L ++  +L  LP+ +G++  L  L++  N +   P  + 
Sbjct: 32  VEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLC-------------FATTLVKMNIGN---------NFA 312
            L +LR L+++ N+L++ P+ +                 TL K  IG          N+ 
Sbjct: 92  QLENLRVLELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSK-GIGQLKNLQELYLNYN 150

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L  LP  IG L+ L+ L+++NNQ+  LP+    L  L+ L +  N L    + I ++
Sbjct: 151 QLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQL 208


>gi|417761388|ref|ZP_12409399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774084|ref|ZP_12421957.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672890|ref|ZP_13234221.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942739|gb|EKN88345.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576120|gb|EKQ39129.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580084|gb|EKQ47914.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 267

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 136/244 (55%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L  L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  ++LP  IG L +L+ L +  N L  LP  IGQ  +L  L +  N+   
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTF 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 110/189 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L +L  L
Sbjct: 32  LPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTTLPKEIGQLQNLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ+++LP  + +L  LE LDL  N  + LP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 59/178 (33%), Positives = 99/178 (55%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ   LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L +LR L+++ N+L S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F     LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---FLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/157 (36%), Positives = 83/157 (52%), Gaps = 3/157 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  R LNL     + +  LP  IG+L +L  LDL+ N+   +P  IG L  L+ L
Sbjct: 81  EIGQLQNLRVLNLAG---NQLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEAL 137

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR    P  I    SL +L L G+Q+  LP  +  L  L+ L L  N L+SLP  I
Sbjct: 138 NLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEI 197

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           G L +L +L ++ N L+ LP  I Q  +L+ LR+  N
Sbjct: 198 GQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/130 (30%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L  LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD++ NQ   LP     L  LRVL +  N L
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|348586778|ref|XP_003479145.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Cavia
           porcellus]
          Length = 1557

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 101 NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 160

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 161 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 220

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 221 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 280

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 281 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPS 338

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 339 TIGYLHSLRTLAVDENFLPELPREI 363



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 149 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 208

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 209 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 268

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 269 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 328

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 329 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 386

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 387 GQMQKLRVLNLSDNRLK 403



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 230 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 289

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 290 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 349

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 350 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 409

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 410 TKLKELAALWLSDNQ 424



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 193 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 252

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 253 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 312

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 313 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 372

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 373 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 428



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 70  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 129

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 130 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 189

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 190 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 247

Query: 367 IVEM 370
           I ++
Sbjct: 248 IGKL 251


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L++  N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 147/305 (48%), Gaps = 42/305 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            DL                        LSL Y D       + P  + +   L  L+L  
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYD 385

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
              S+LP  I  L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++ 
Sbjct: 386 CGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR 445

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS+  N +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L
Sbjct: 446 NLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QL 503

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             L   IG L+ L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G   
Sbjct: 504 TNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQ 560

Query: 375 VVQYM 379
            +Q++
Sbjct: 561 NLQWL 565



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/182 (35%), Positives = 103/182 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  L   I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L +  N
Sbjct: 511 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 288 EL 289
           +L
Sbjct: 571 QL 572



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 120/218 (55%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 85/252 (33%), Positives = 140/252 (55%), Gaps = 10/252 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IGKL +L  L L  N++  +P  IG L  L+ L L+ N++  LP  IG L 
Sbjct: 52  NQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQ 111

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++++LP  + +L +L+ L L  N L +LP  IG L  L++L++  N L  
Sbjct: 112 NLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLTM 171

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ   L+ L +  N+L+ LP+ +GK+  L VL +  N +  LP  +  L +L+ L
Sbjct: 172 LPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVL 231

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L ++P+ +     L K+++  N  +   +P+ IG L+ L+EL         L D
Sbjct: 232 DLGGNQLATLPKDIGKLQNLQKLHL--NGYEFTTIPKEIGQLQKLQEL--------YLDD 281

Query: 343 SFRMLSRLRVLR 354
           +F + S+ + +R
Sbjct: 282 TFALRSQEKKIR 293



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 128/255 (50%), Gaps = 25/255 (9%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           + ++ LDL+ N++  +P  IG L +L+KL L  N++  LP+ IG L  L  L L  NQ+ 
Sbjct: 42  TDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLK 101

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  + +L  L  L L  N L+SLP  IG L  L++L ++ N L  LP  IG+   LRE
Sbjct: 102 TLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRE 161

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L  LP+ +G++  L+ L +  N ++ LP  +  L +LR L +  N+L +    
Sbjct: 162 LLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLAT---- 217

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                                LP+ IG L+ L+ LD+  NQ+  LP     L  L+ L +
Sbjct: 218 ---------------------LPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQNLQKLHL 256

Query: 356 QENPLEVPPRNIVEM 370
                   P+ I ++
Sbjct: 257 NGYEFTTIPKEIGQL 271


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L L +NR+  LP+ I  L +L  L
Sbjct: 154 LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVL 213

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  LP+ I
Sbjct: 214 DLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI 273

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+    P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N
Sbjct: 274 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 333

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L
Sbjct: 334 QLITLPKEIEQLKNLKSLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQL 391

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 392 KNLQTLFLSNNQLTTLPQEIGQL 414



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/288 (32%), Positives = 157/288 (54%), Gaps = 7/288 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 64  IEIGQLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 120

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L LR N+++ LP  + +L  L+ LDLGSN L+ LP  
Sbjct: 121 LDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQE 180

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +L+ L + +N L  LP+ I Q  +L+ L +  N+L  LP+ + ++  L++L +  
Sbjct: 181 IEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHS 240

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFADLRALPRSIG 322
           N +  L   +  L +L+ LD+S N+L ++P  +     L  + +  N FA     P+ IG
Sbjct: 241 NRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA---TFPKEIG 297

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L+ L+ L ++NNQI +LP+    L +L+ L + +N L   P+ I ++
Sbjct: 298 QLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQL 345



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 87/256 (33%), Positives = 142/256 (55%), Gaps = 2/256 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   +  +P  IG L +L++L LH N++  LP  I  L +L  L LR N+++ LP  
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDLGSN L+ LP  I  L +L+ L + +N L  LP+ I Q  +L+ L +  
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ + ++  L++L +R N +  LP  +  L +L+ LD+  N+L  +P+ +    
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLK 231

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  + + +N   L  L + I  L+ L+ LD+SNNQ+  LP+    L  L+ L + EN  
Sbjct: 232 NLQLLYLHSN--RLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQF 289

Query: 361 EVPPRNIVEMGAQAVV 376
              P+ I ++    V+
Sbjct: 290 ATFPKEIGQLQNLKVL 305



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  NR+  +P  I  L +L+ LDL +N++  LP  I  L +L  L
Sbjct: 177 LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL 236

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ L   + +L  L+ LDL +N L++LP+ I  L +LK L +  N     P  I
Sbjct: 237 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 296

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L ++ N++  LP  + K+  L+ L +  N +  LP  +  L +L+ LD+S+N
Sbjct: 297 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYN 356

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  +++ NN   L+ LP+ I  L+ L+ L +SNNQ+  LP     L
Sbjct: 357 QLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQL 414

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L +  N L   P  I ++
Sbjct: 415 QNLLWLSLVYNQLTTLPNEIEQL 437



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 200 LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 259

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 260 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 319

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 320 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 379

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 380 QLKTLPKEIEQLKNLQTLFLSNN--QLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQL 437

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 438 KNLQTLYLNNN 448



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 107/189 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L 
Sbjct: 264 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 323

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YL L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ 
Sbjct: 324 KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKT 383

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +L+ L +  N+L  LP+ +G++  L  LS+ YN +  LP  +  L +L+ L
Sbjct: 384 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTL 443

Query: 283 DVSFNELES 291
            ++ N+  S
Sbjct: 444 YLNNNQFSS 452


>gi|418731225|ref|ZP_13289638.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774120|gb|EKR54139.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 297

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 144/255 (56%), Gaps = 4/255 (1%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           +++ +S+ L E  + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ+
Sbjct: 25  MNTRISMGLHE--LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQL 82

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           ++LP  + +L  LE LDL  N L+SLP  IG L  L+ L +  N    LP  IGQ  +L 
Sbjct: 83  TSLPKEIGQLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 142

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +  N+  +LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+ +P+
Sbjct: 143 RLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPK 202

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +     L  +++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR
Sbjct: 203 EILLLQNLQSLHLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLR 260

Query: 355 VQENPLEVPPRNIVE 369
           +  N   +  +  ++
Sbjct: 261 LYSNSFSLKEKQKIQ 275



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 112/189 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N++ ++P  IG L +L++LDL  N++  LP  IG L  L  L
Sbjct: 62  LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQLASLPKEIGQLQKLRVL 121

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L  LE LDL  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 122 NLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 181

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 182 RQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 241

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 242 KLKTLPKEI 250



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 123/221 (55%), Gaps = 6/221 (2%)

Query: 70  QDGEKLSLI--KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           Q+ EKL+L   +L SL  E+   +  R LNL     + +  LP  IG+L +L  LDL  N
Sbjct: 47  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG---NQLTSLPKEIGQLQNLERLDLDGN 103

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           ++ ++P  IG L  L+ L+L  N+   LP  IG L +L  LDL GNQ ++LP  + +L +
Sbjct: 104 QLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQK 163

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LE L+L  N  +  P  I    SLK L +  + L+ LP  I    +L+ L +D N+L +L
Sbjct: 164 LEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDGNQLTSL 223

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           P+ +G++  L  L+++ N +K LP  +  L +L+ L +  N
Sbjct: 224 PKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 264



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/112 (30%), Positives = 60/112 (53%), Gaps = 2/112 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           +S+  + ++ LP  +    +L +L++  N+L S+P+ +     L  +N+  N   L +LP
Sbjct: 29  ISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGN--QLTSLP 86

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + IG L+ LE LD+  NQ+  LP     L +LRVL +  N     P+ I ++
Sbjct: 87  KEIGQLQNLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQL 138


>gi|198426338|ref|XP_002124802.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
          Length = 598

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 150/272 (55%), Gaps = 5/272 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +     L  LD+ +N++ A+P  IG LS+L+ L+L  N++  +  S   L++L  L
Sbjct: 93  LPEDLQSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLSIIQTSFNGLVNLRVL 152

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N++  LP +L RL   E+LD+  N +++LP+ I  +  LK      N L  LP+ I
Sbjct: 153 LLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKDFNASFNQLNALPNNI 212

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  SLR L    N++K LP+++  +  LE+LS R N + QLP +++S   L+EL +  N
Sbjct: 213 GKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNLLDQLP-SLTSCVCLKELSLGNN 271

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P  L  + T++++        L  +P S+  L  LE  DI+NN +  LP     +
Sbjct: 272 RLTCFPSQLPVSVTILELRDN----KLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAM 327

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             ++V+ V  NP+     +I+  G QA+++++
Sbjct: 328 ESIKVVVVSGNPIRTISSHILNKGTQALLKHL 359



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 121/245 (49%), Gaps = 27/245 (11%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +L+LS N+   +P+ +  L+  K     A    +   +  D + L  L+L  N + +LP 
Sbjct: 38  TLNLSNNQWDVLPSNVWSLN--KAPTKEAASFDDGNSAWWDQVELTKLNLSSNLLCSLPE 95

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            L     L+ LD+  N L +LP++IG+L +L+ L +  N L  +  +     +LR L + 
Sbjct: 96  DLQSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLSIIQTSFNGLVNLRVLLLQ 155

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
           +NRL+ LP ++G++   E L + +N I  LP  +  +  L++ + SFN+           
Sbjct: 156 HNRLRELPSSLGRLQNCEKLDISHNQITTLPEDICGIKFLKDFNASFNQ----------- 204

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
                         L ALP +IG L+ L  LD SNN+I+ LPDS   L +L +L  + N 
Sbjct: 205 --------------LNALPNNIGKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNL 250

Query: 360 LEVPP 364
           L+  P
Sbjct: 251 LDQLP 255



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 152/316 (48%), Gaps = 46/316 (14%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD-- 156
           N   + +  LP++IGKL SL  LD S N+I  +P +I  L  L+ L    N + +LP   
Sbjct: 199 NASFNQLNALPNNIGKLQSLRILDASNNKIKCLPDSISTLKQLEILSFRNNLLDQLPSLT 258

Query: 157 --------SIGD----------LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
                   S+G+           +S+  L+LR N++S +P++++ L +LE  D+ +NN+ 
Sbjct: 259 SCVCLKELSLGNNRLTCFPSQLPVSVTILELRDNKLSEIPLSVTELTQLERFDIANNNVP 318

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTI---GQCSSLREL--RVDYNRLKALPEAVGKI 253
           +LP  +G++ S+K ++V  N +  +   I   G  + L+ L  R+  N  ++L  + G +
Sbjct: 319 NLPPEVGAMESIKVVVVSGNPIRTISSHILNKGTQALLKHLRSRIVSNETESLNASTGSV 378

Query: 254 ------------HTLEVLSVRYNNIKQLPTTMSSLSSL------RELDVSFNELESVPES 295
                         L   S + +  K+ P ++++  +L       E+ ++   L ++PE 
Sbjct: 379 IPQSNSNNDLSNKHLVASSRKLDLTKENPESVTTKLALYSELPVNEVILARCSLTNIPEE 438

Query: 296 LC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           L  +  +L  +N+ NN   L+ LP  IG    L  LD+S N +  LPD       LR + 
Sbjct: 439 LSGYKGSLSTLNMSNN--KLKCLPPMIGCFSQLGHLDLSGNAMSALPDELGECISLREIN 496

Query: 355 VQENPLEVPPRNIVEM 370
           +  N   V P +I ++
Sbjct: 497 MSYNLFTVLPGSIFKL 512



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 104/201 (51%), Gaps = 25/201 (12%)

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           V L +L+L SN L SLP+ + S   LK L V  N L+ LP+ IG  S+L  L + +N+L 
Sbjct: 78  VELTKLNLSSNLLCSLPEDLQSFEFLKFLDVHDNKLQALPNAIGNLSALEHLNLSHNQLS 137

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            +  +   +  L VL +++N +++LP+++  L +  +LD+S N++ ++PE +C       
Sbjct: 138 IIQTSFNGLVNLRVLLLQHNRLRELPSSLGRLQNCEKLDISHNQITTLPEDIC------- 190

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
                              ++ L++ + S NQ+  LP++   L  LR+L    N ++  P
Sbjct: 191 ------------------GIKFLKDFNASFNQLNALPNNIGKLQSLRILDASNNKIKCLP 232

Query: 365 RNIVEMGAQAVVQYMADLVEK 385
            +I  +    ++ +  +L+++
Sbjct: 233 DSISTLKQLEILSFRNNLLDQ 253



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 140/311 (45%), Gaps = 50/311 (16%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           S+  L+L +N++  +P ++  L+ L++ D+  N +  LP  +G + S+  + + GN I  
Sbjct: 283 SVTILELRDNKLSEIPLSVTELTQLERFDIANNNVPNLPPEVGAMESIKVVVVSGNPIRT 342

Query: 177 LPVAL-------------SRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE- 221
           +   +             SR+V  E   L ++  S +P S   + +S K L+  +  L+ 
Sbjct: 343 ISSHILNKGTQALLKHLRSRIVSNETESLNASTGSVIPQSNSNNDLSNKHLVASSRKLDL 402

Query: 222 --ELPHTIGQCSSL------RELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTT 272
             E P ++    +L       E+ +    L  +PE + G   +L  L++  N +K LP  
Sbjct: 403 TKENPESVTTKLALYSELPVNEVILARCSLTNIPEELSGYKGSLSTLNMSNNKLKCLPPM 462

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +   S L  LD+S N + ++P+ L    +L ++N+  N      LP SI  L+ LE L  
Sbjct: 463 IGCFSQLGHLDLSGNAMSALPDELGECISLREINMSYNL--FTVLPGSIFKLKNLEVLVA 520

Query: 333 SNNQ------------------------IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            NNQ                        I  +P    + + +  L+++ N   VP +N++
Sbjct: 521 DNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFTSITALKLEGNLFRVPRQNVL 580

Query: 369 EMGAQAVVQYM 379
           + G  A+++Y+
Sbjct: 581 QKGTLALMEYL 591



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 77/256 (30%), Positives = 120/256 (46%), Gaps = 29/256 (11%)

Query: 90  KGTRDL--NLQNKLMDN-IEWLPDSIGKL--SSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           KGT+ L  +L+++++ N  E L  S G +   S  + DLS   +VA         S +KL
Sbjct: 350 KGTQALLKHLRSRIVSNETESLNASTGSVIPQSNSNNDLSNKHLVA---------SSRKL 400

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQI-------SALPVALSRLV-RLEELDLGSNN 196
           DL      E P+S+   L+L Y +L  N++       + +P  LS     L  L++ +N 
Sbjct: 401 DLTK----ENPESVTTKLAL-YSELPVNEVILARCSLTNIPEELSGYKGSLSTLNMSNNK 455

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L  LP  IG    L  L +  N +  LP  +G+C SLRE+ + YN    LP ++ K+  L
Sbjct: 456 LKCLPPMIGCFSQLGHLDLSGNAMSALPDELGECISLREINMSYNLFTVLPGSIFKLKNL 515

Query: 257 EVLSVRYNNIKQLPT-TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADL 314
           EVL    N + ++    +  L  L  L +  N +  VP  L   T++  + + GN F   
Sbjct: 516 EVLVADNNQMTKIDVPNLKLLQQLSTLSLQNNSINEVPPELGLFTSITALKLEGNLFRVP 575

Query: 315 RALPRSIGNLEMLEEL 330
           R      G L ++E L
Sbjct: 576 RQNVLQKGTLALMEYL 591


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/263 (33%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L L +NR+  LP+ I  L +L  L
Sbjct: 108 LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVL 167

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  LP+ I
Sbjct: 168 DLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEI 227

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+    P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N
Sbjct: 228 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 287

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L
Sbjct: 288 QLITLPKEIEQLKNLKSLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQL 345

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 346 KNLQTLFLSNNQLTTLPQEIGQL 368



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 142/251 (56%), Gaps = 4/251 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   +  +P  IG L +L++L LH N++  LP  I  L +L  L LR N+++ LP  
Sbjct: 52  LDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNE 111

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDLGSN L+ LP  I  L +L+ L + +N L  LP+ I Q  +L+ L +  
Sbjct: 112 IEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGS 171

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+ + ++  L++L +  N +  L   +  L +L+ LD+S N+L ++P  +    
Sbjct: 172 NQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLK 231

Query: 301 TLVKMNIG-NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            L  + +  N FA     P+ IG L+ L+ L ++NNQI +LP+    L +L+ L + +N 
Sbjct: 232 NLKSLYLSENQFA---TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQ 288

Query: 360 LEVPPRNIVEM 370
           L   P+ I ++
Sbjct: 289 LITLPKEIEQL 299



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  NR+  +P  I  L +L+ LDL +N++  LP  I  L +L  L
Sbjct: 131 LPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLL 190

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ L   + +L  L+ LDL +N L++LP+ I  L +LK L +  N     P  I
Sbjct: 191 YLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEI 250

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L ++ N++  LP  + K+  L+ L +  N +  LP  +  L +L+ LD+S+N
Sbjct: 251 GQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYN 310

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     L  +++ NN   L+ LP+ I  L+ L+ L +SNNQ+  LP     L
Sbjct: 311 QLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQLKNLQTLFLSNNQLTTLPQEIGQL 368

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L +  N L   P  I ++
Sbjct: 369 QNLLWLSLVYNQLTTLPNEIEQL 391



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/251 (33%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 154 LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 213

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 214 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 273

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 274 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 333

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 334 QLKTLPKEIEQLKNLQTLFLSNN--QLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQL 391

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 392 KNLQTLYLNNN 402



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 107/189 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L 
Sbjct: 218 NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK 277

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YL L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ 
Sbjct: 278 KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKT 337

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +L+ L +  N+L  LP+ +G++  L  LS+ YN +  LP  +  L +L+ L
Sbjct: 338 LPKEIEQLKNLQTLFLSNNQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTL 397

Query: 283 DVSFNELES 291
            ++ N+  S
Sbjct: 398 YLNNNQFSS 406


>gi|124010202|ref|ZP_01694858.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123983746|gb|EAY24173.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 521

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/265 (34%), Positives = 153/265 (57%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D++  LP SI KL +L  L+L+ N +  +P  IG L  L++L + +N +  LP SIG L 
Sbjct: 110 DSLIALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQ 169

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR + +  LP ++ +L  L++L L ++ L  LP SIG L +LKKLI+  + L++
Sbjct: 170 NLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKK 229

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG+  +L++L +  + LK LP+++G++  LE L ++ N +  LP ++S L  L+++
Sbjct: 230 LPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKM 289

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  + L ++P+S+     L  + +  N  +L AL   IG  + L+ L I N Q   LP 
Sbjct: 290 TLIAHHLRTLPKSIGNFPELEMLELEVN--NLVALTPGIGQFKQLKYLKIVNGQFATLPQ 347

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           S   L  L +L +   PL   P+ I
Sbjct: 348 SIGDLQNLEMLFLLNVPLTTLPKGI 372



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 98/275 (35%), Positives = 160/275 (58%), Gaps = 2/275 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D ++ LP SIGKL +L  L L  + +  +P +IG L +LKKL L A+ + +LP SIG L 
Sbjct: 202 DALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLP 261

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ LP +LS+L +L+++ L +++L +LP SIG+   L+ L +E N+L  
Sbjct: 262 NLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLVA 321

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L   IGQ   L+ L++   +   LP+++G +  LE+L +    +  LP  + +L  LR L
Sbjct: 322 LTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTTLPKGIGNLKKLRRL 381

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  ++L ++PE++     LV +N+  N   L  LP SIGNL+ L  L++S+NQ+   P+
Sbjct: 382 QILKSKLTTLPEAIDNLQNLVLLNLSYN--QLTRLPESIGNLQNLGNLNLSHNQLTQFPE 439

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           S   LS L  L    N L   P++I  +     +Q
Sbjct: 440 SLSKLSGLGTLNANHNQLTSLPKSIGALKGLVYLQ 474



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 140/245 (57%), Gaps = 2/245 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D ++ LP SIG+L +L  L L  NR+  +P ++  L  LKK+ L A+ +  LP SIG+  
Sbjct: 248 DALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFP 307

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L  N + AL   + +  +L+ L + +   ++LP SIG L +L+ L +    L  
Sbjct: 308 ELEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTT 367

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    LR L++  ++L  LPEA+  +  L +L++ YN + +LP ++ +L +L  L
Sbjct: 368 LPKGIGNLKKLRRLQILKSKLTTLPEAIDNLQNLVLLNLSYNQLTRLPESIGNLQNLGNL 427

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           ++S N+L   PESL   + L  +N  +N   L +LP+SIG L+ L  L +  NQ++ LP 
Sbjct: 428 NLSHNQLTQFPESLSKLSGLGTLNANHN--QLTSLPKSIGALKGLVYLQLRYNQLKTLPK 485

Query: 343 SFRML 347
           SF  L
Sbjct: 486 SFYKL 490



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 133/242 (54%), Gaps = 2/242 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           +D ++ LP SIGKL +L  L L  + +  +P +IG L +LKKL L A+ + +LP SIG L
Sbjct: 178 VDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKL 237

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L LR + +  LP ++ RL  LE+L L  N L++LP S+  L  LKK+ +  + L 
Sbjct: 238 QNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLPKLKKMTLIAHHLR 297

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP +IG    L  L ++ N L AL   +G+   L+ L +       LP ++  L +L  
Sbjct: 298 TLPKSIGNFPELEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEM 357

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +    L ++P+ +     L ++ I    + L  LP +I NL+ L  L++S NQ+  LP
Sbjct: 358 LFLLNVPLTTLPKGIGNLKKLRRLQILK--SKLTTLPEAIDNLQNLVLLNLSYNQLTRLP 415

Query: 342 DS 343
           +S
Sbjct: 416 ES 417



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/252 (28%), Positives = 136/252 (53%), Gaps = 28/252 (11%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           ++ L  + ++ +   I  L  L+ L +    +  LP + G+L +L  L ++ + + ALP 
Sbjct: 59  TMVLYGDNVINLSPRISELKDLRGLIIKCKNLKTLPKNFGEL-NLYSLRIKSDSLIALPK 117

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ++S+L  L  L+L +N+L+ LP  IG L  L++L + +N L  LP +IG+  +L++L + 
Sbjct: 118 SISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLKKLILR 177

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            + LK LP+++GK+  L+ L +R + +K+LP ++  L +L++L +               
Sbjct: 178 VDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILR-------------- 223

Query: 300 TTLVKMNIGNNFAD-LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                       AD L+ LP+SIG L+ L++L +  + ++ LP S   L  L  L +Q N
Sbjct: 224 ------------ADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVN 271

Query: 359 PLEVPPRNIVEM 370
            L   P+++ ++
Sbjct: 272 RLTTLPKSLSQL 283



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 109/202 (53%), Gaps = 9/202 (4%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           +E + L  +N+ +L   I  L  L+ LI++  +L+ LP   G+ + L  LR+  + L AL
Sbjct: 57  IETMVLYGDNVINLSPRISELKDLRGLIIKCKNLKTLPKNFGELN-LYSLRIKSDSLIAL 115

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P+++ K+  L  L +  N++ +LP  +  L  L+ L +  N L ++P+S+     L K+ 
Sbjct: 116 PKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKIGSNSLRALPKSIGKLQNLKKLI 175

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +      L+ LP+SIG L+ L++L +  + ++ LP S   L  L+ L ++ + L+  P++
Sbjct: 176 L--RVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKS 233

Query: 367 IVEMGAQAVVQYMADLVEKRDA 388
           I ++      Q +  L+ + DA
Sbjct: 234 IGKL------QNLKKLILRADA 249


>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 267

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 79/244 (32%), Positives = 136/244 (55%), Gaps = 2/244 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           + + ++P  IG   +L+KL+L  N++  LP  IG L +L  L+L GNQ ++LP  + +L 
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            LE LDL  N  +SLP  IG L  L+ L +  N    LP  IGQ  +L  L +  N+  +
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+ +G++  LE L++ +N     P  +    SL+ L +S ++L+++P+ +     L  +
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSL 183

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L +LP+ IG L+ L EL++ +N+++ LP     L  L+VLR+  N   +  +
Sbjct: 184 HLDGN--QLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEK 241

Query: 366 NIVE 369
             ++
Sbjct: 242 QKIQ 245



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/189 (37%), Positives = 110/189 (58%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L+ N+  ++P  IG L +L++LDL  N+   LP  IG L  L  L
Sbjct: 32  LPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVL 91

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ ++LP  + +L  LE LDL  N  +SLP  IG L  L+ L ++ N     P  I
Sbjct: 92  NLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEI 151

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+ LR+  ++LK LP+ +  +  L+ L +  N +  LP  +  L +L EL++  N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 288 ELESVPESL 296
           +L+++P+ +
Sbjct: 212 KLKTLPKEI 220



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 102/180 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  LDL  N+  ++P  IG L  L+ L+L  N+   LP  IG L +L  L
Sbjct: 55  LPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERL 114

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ ++LP  + +L +LE L+L  N  +  P  I    SLK L +  + L+ LP  I
Sbjct: 115 DLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEI 174

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L+ L +D N+L +LP+ +G++  L  L+++ N +K LP  +  L +L+ L +  N
Sbjct: 175 LLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 99/178 (55%), Gaps = 4/178 (2%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           +G + L SLP  IG   +L+KL ++ N L  LP  IGQ  +LR L +  N+  +LP+ +G
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNN 310
           ++  LE L +  N    LP  +  L  LR L+++ N+  S+P+ +     L ++++ GN 
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQ 120

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           F    +LP+ IG L+ LE L++ +N+  + P   R    L+ LR+  + L+  P+ I+
Sbjct: 121 FT---SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEIL 175



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           + L++LP  +G    LE L++  N +  LP  +  L +LR L+++               
Sbjct: 4   HELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLA--------------- 48

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                  GN F    +LP+ IG L+ LE LD+  NQ   LP     L +LRVL +  N  
Sbjct: 49  -------GNQFT---SLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQF 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TSLPKEIGQL 108


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  +P++IG+L  L  LD   N +  +P  IG L  L  L ++ N++ E+P  +  L 
Sbjct: 46  NNLTSIPEAIGRLQKLYRLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLP 105

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N++S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N+L  
Sbjct: 106 NLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLST 165

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + +   LREL +  N+L  +P  V  +  LEVL V  NN+   P  +  L  LREL
Sbjct: 166 FPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLREL 225

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L  VP  +C    L  +++ NN   L   P  +  L+ L EL I +NQ+  +P 
Sbjct: 226 YIYGNQLTEVPSGVCSLPNLEVLSVSNN--KLSTFPPGVEKLQKLRELYIYDNQLTEVPT 283

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L  L  L V  NP+   PR ++++
Sbjct: 284 GVCSLPDLEWLSVGNNPIRRLPRQVLQL 311



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 131/260 (50%), Gaps = 5/260 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP ++   + L++LDLS   + ++P  +  ++ L+ LD+  N +  +P++IG L  L  L
Sbjct: 8   LPQTV---NGLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRL 64

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D   N ++ LP A+  L +L  L +  N L+ +P  + SL +L+ L V  N L   P  +
Sbjct: 65  DAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGV 124

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   LREL ++ N+L  +P  V  +  LEVL V  NN+   P  +  L  LREL +  N
Sbjct: 125 EKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGN 184

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VP  +C    L  + + NN  +L   P  +  L+ L EL I  NQ+  +P     L
Sbjct: 185 QLTEVPSGVCSLPNLEVLGVSNN--NLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSL 242

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L VL V  N L   P  +
Sbjct: 243 PNLEVLSVSNNKLSTFPPGV 262



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 138/283 (48%), Gaps = 25/283 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +  L +L  L +S N +   P  +  L  L++L ++ N++ E+P  +  L +L  L
Sbjct: 189 VPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVL 248

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N++S  P  + +L +L EL +  N L+ +P  + SL  L+ L V  N +  LP  +
Sbjct: 249 SVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQV 308

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L +L     +   +P+ VG +  L  L++ YN +K LP+TM  L +LRE+ +  N
Sbjct: 309 LQLKTLEKLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSN 368

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + ++ PE LC                          L  +E+L I NN I  LP +    
Sbjct: 369 KFDTFPEVLC-------------------------ELPAMEKLVIRNNNITRLPTALHRA 403

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            +L+ L V  NPL  PP+++ E G  A++ ++    EK   K+
Sbjct: 404 DKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEAEKTSRKS 446



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 131/265 (49%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  + KL  L  L ++ N++  VP+ +  L +L+ L +  N +   P  +  L  L  L
Sbjct: 120 FPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLREL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            + GNQ++ +P  +  L  LE L + +NNLS+ P  +  L  L++L +  N L E+P  +
Sbjct: 180 YIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGV 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L  L V  N+L   P  V K+  L  L +  N + ++PT + SL  L  L V  N
Sbjct: 240 CSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            +  +P  +    TL K+  G+   D+  +P  +GNL+ L  L +  N ++ LP + R L
Sbjct: 300 PIRRLPRQVLQLKTLEKLYAGDCKFDM--VPDEVGNLQHLWFLALEYNLLKTLPSTMRHL 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
             LR +R+  N  +  P  + E+ A
Sbjct: 358 HNLREVRLWSNKFDTFPEVLCELPA 382



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 5/102 (4%)

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP T++ L +L   D+S   L S+PE +   T L  +++ +N  +L ++P +IG L+ L 
Sbjct: 8   LPQTVNGLLTL---DLSNQGLTSIPEEVFDITDLEDLDVSDN--NLTSIPEAIGRLQKLY 62

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LD  +N +  LP +   L +L  L + +N L   P  +  +
Sbjct: 63  RLDAYSNMLTRLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSL 104


>gi|260788670|ref|XP_002589372.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
 gi|229274549|gb|EEN45383.1| hypothetical protein BRAFLDRAFT_217926 [Branchiostoma floridae]
          Length = 445

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 149/288 (51%), Gaps = 5/288 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           ++  +  G   L+L N+ + +I   P+ +  ++ L  LD+S N++ ++P  +G L  L +
Sbjct: 7   LQPQTVNGRLKLDLSNQGLTSI---PEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYR 63

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LD   N +  LP +IG L  L +L +  N++S LP  + +L +L +L +G+N L+  P  
Sbjct: 64  LDADYNTLTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSG 123

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           + SL +L+ L V  N L   P  + +   LR L ++ N+L  +P  V  +  LEVLSV  
Sbjct: 124 VCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSN 183

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +   P  +  L  LREL +  N+L  VP  +C    L  +++ NN  +L   P  +  
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNN--NLSTFPPGVEK 241

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           L+ + EL I  NQ+  +P    +L  L VL V  NP+   P ++  + 
Sbjct: 242 LQKVRELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLA 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 134/286 (46%), Gaps = 28/286 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  + KL  L  L +  N++  VP+ +  L +L+ L ++ N +   P  +  L 
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQ 243

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            +  L + GNQ++ +P  +  L  LE L +G N +  LP+ +  L  LK L V     +E
Sbjct: 244 KVRELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDE 303

Query: 223 LPHTIGQCSSLRELRVDYN---RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
            P  +    +L EL    N   +   +P+ VG +  L +LS+ YN ++ LP+TMS L +L
Sbjct: 304 FPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSLEYNLLRTLPSTMSHLHNL 363

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R + +  N+ ++ PE LC                          L  +E+LDI NN I  
Sbjct: 364 RVVQLPNNKFDTFPEVLC-------------------------ELPAMEKLDIRNNNITR 398

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           L  +     +LR L V  NPL  PP+++ E G  A++ ++     K
Sbjct: 399 LLTALHRADKLRDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEARK 444



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 138/271 (50%), Gaps = 1/271 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  +  L +L  L++S N++   P  +  L  L+ L ++ N++ E+P  +  L 
Sbjct: 115 NQLTGFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLP 174

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N++S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N+L  
Sbjct: 175 NLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLST 234

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + +   +REL +  N+L  +P  V  +  LEVLSV  N I++LP  ++ L+ L+ L
Sbjct: 235 FPPGVEKLQKVRELYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTL 294

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFA-DLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V   + +  P  +    TL ++  G N       +P  +GNL+ L  L +  N +R LP
Sbjct: 295 SVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLWLLSLEYNLLRTLP 354

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            +   L  LRV+++  N  +  P  + E+ A
Sbjct: 355 STMSHLHNLRVVQLPNNKFDTFPEVLCELPA 385


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IGKL +L  L L  N++  +P  I  L +L+ L L +NR+  LP  I  L +L
Sbjct: 58  LKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  LP
Sbjct: 118 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I Q  +L+ L +  N+    P+ +G++  L+VL +  N I  LP  ++ L  L+ L +
Sbjct: 178 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+L ++P+ +     L  +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP   
Sbjct: 238 SDNQLITLPKEIEQLKNLQTLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             L  L+ L +  N L + P+ I
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEI 318



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/287 (32%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 135/253 (53%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQENPL 360
             L+ L +  N L
Sbjct: 345 KNLQTLYLNNNQL 357



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/184 (39%), Positives = 106/184 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 176 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 235

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N L+ LP  +G L +L+ L +  N L+ LP  I
Sbjct: 236 YLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEI 295

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 296 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355

Query: 288 ELES 291
           +L S
Sbjct: 356 QLSS 359


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVLPKEIGQL 300



 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 243 RLTVLPKEIGQLQNLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 166/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L +L   ENR+ A+P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 277 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 369 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 428

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 429 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 488

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 489 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 547

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 548 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 583



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|428181670|gb|EKX50533.1| hypothetical protein GUITHDRAFT_66876, partial [Guillardia theta
           CCMP2712]
          Length = 526

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 137/241 (56%), Gaps = 5/241 (2%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           +  +PA I  L+ LK L LH N I E+P  IG+L  L  + L  N I  +P ++S L +L
Sbjct: 3   LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
             L + +N L  LP+ IG+   L  L +  N L +LP+++GQC+ LREL +D+N L+  P
Sbjct: 63  SVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQVPP 122

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF--NELESVPESLCFATTLVKM 305
           + +  +  L  + V +N+I +LP  + + + L  L+VSF  N++  +P+ L     + ++
Sbjct: 123 DWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTEL 182

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           ++ NN   L+ALP  +G L  L  L   NN I VL DS  MLS LR L +  N L E+PP
Sbjct: 183 DVSNN--RLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPP 240

Query: 365 R 365
            
Sbjct: 241 E 241



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/313 (33%), Positives = 168/313 (53%), Gaps = 31/313 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L DSI  LSSL  LDLS N +  +P  I  L++L+ L L  NRI  LP  IG+LL +V +
Sbjct: 215 LEDSISMLSSLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEV 274

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP--- 224
           +L  N++  +P  + ++  L+ L +  N L+ LP+ I  L SL K+ +  N L+ LP   
Sbjct: 275 NLSENELEYIPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAES 334

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG    L ELR   N+L ++PE + ++ TL++L +  N I++LP  +  LSSLRELD+
Sbjct: 335 FAIGYLYKLTELRFSNNQLSSIPEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDL 394

Query: 285 SF--NELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSI 321
           S   N L+ +P  +     L K+ + +N                       +L ALP  +
Sbjct: 395 SLAGNMLQMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERL 454

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L  L+++++SNN++RV+  +   LS L  L +  N L+  PR   E+G    + +++ 
Sbjct: 455 GQLRNLKQMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPR---EIGQIEKLLFLS- 510

Query: 382 LVEKRDAKTQPVK 394
            +E  + ++ PV+
Sbjct: 511 -LEHNELQSLPVQ 522



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 144/267 (53%), Gaps = 4/267 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI+ +P SI  L  L  L +  N +  +P  IG  + L  L L  NR+ +LP S+G   
Sbjct: 47  NNIKEIPSSISNLQKLSVLWIQNNELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCT 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV--ETNDL 220
            L  L +  N++   P  +  L  L  +D+  N+++ LP  IG+   L  L V   +N +
Sbjct: 107 MLRELMIDHNELQVPPDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKI 166

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            +LP  +G  + + EL V  NRL+ALP  +GK+  L +L    N I  L  ++S LSSLR
Sbjct: 167 SKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLR 226

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+SFN L  +P  + F T L  + + NN   ++ LP  IGNL  + E+++S N++  +
Sbjct: 227 KLDLSFNMLRELPPEIIFLTNLEGLYLVNN--RIKTLPGDIGNLLKMVEVNLSENELEYI 284

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P++   +  L+ L ++EN L   P  I
Sbjct: 285 PETVGKMEALQSLVIEENALNYLPNQI 311



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/267 (33%), Positives = 145/267 (54%), Gaps = 7/267 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  +G L+ +  LD+S NR+ A+P+ +G L++L  L    N I+ L DSI  L 
Sbjct: 164 NKISKLPQELGLLADMTELDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLS 223

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LDL  N +  LP  +  L  LE L L +N + +LP  IG+L+ + ++ +  N+LE 
Sbjct: 224 SLRKLDLSFNMLRELPPEIIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEY 283

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT---TMSSLSSL 279
           +P T+G+  +L+ L ++ N L  LP  +  + +L  +S+  N +  LP     +  L  L
Sbjct: 284 IPETVGKMEALQSLVIEENALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKL 343

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS--NNQI 337
            EL  S N+L S+PE +   TTL  +++  N   +R LP  +G L  L ELD+S   N +
Sbjct: 344 TELRFSNNQLSSIPEIISQLTTLDILHLAKN--QIRKLPYELGVLSSLRELDLSLAGNML 401

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++P        L+ L + +N L + P
Sbjct: 402 QMIPSGIGNFQGLKKLFLNDNQLAILP 428



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 138/273 (50%), Gaps = 30/273 (10%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL--HANRIIELPDSIGDLLSLVY 166
           PD I  L +L  +D+S N I  +PA IG  + L  L++  ++N+I +LP  +G L  +  
Sbjct: 122 PDWIRNLQALTYMDVSHNSINKLPAEIGACTELHHLNVSFNSNKISKLPQELGLLADMTE 181

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP-- 224
           LD+  N++ ALP  L +L  L  L  G+N +  L DSI  L SL+KL +  N L ELP  
Sbjct: 182 LDVSNNRLQALPSDLGKLTNLNILLDGNNLIVVLEDSISMLSSLRKLDLSFNMLRELPPE 241

Query: 225 ---------------------HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
                                  IG    + E+ +  N L+ +PE VGK+  L+ L +  
Sbjct: 242 IIFLTNLEGLYLVNNRIKTLPGDIGNLLKMVEVNLSENELEYIPETVGKMEALQSLVIEE 301

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPE---SLCFATTLVKMNIGNNFADLRALPRS 320
           N +  LP  ++ L+SL ++ ++ N L+ +P    ++ +   L ++   NN   L ++P  
Sbjct: 302 NALNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNN--QLSSIPEI 359

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           I  L  L+ L ++ NQIR LP    +LS LR L
Sbjct: 360 ISQLTTLDILHLAKNQIRKLPYELGVLSSLREL 392



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 125/225 (55%), Gaps = 7/225 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPA---TIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + +LP+ I  L+SL  + L+ N +  +PA    IG L  L +L    N++  +P+ I  L
Sbjct: 304 LNYLPNQINGLTSLTKISLANNALDMLPAESFAIGYLYKLTELRFSNNQLSSIPEIISQL 363

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDL--GSNNLSSLPDSIGSLISLKKLIVETND 219
            +L  L L  NQI  LP  L  L  L ELDL    N L  +P  IG+   LKKL +  N 
Sbjct: 364 TTLDILHLAKNQIRKLPYELGVLSSLRELDLSLAGNMLQMIPSGIGNFQGLKKLFLNDNQ 423

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP ++G    L EL++  N L ALPE +G++  L+ +++  N ++ +   + +LS+L
Sbjct: 424 LAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNKLRVVLPAIGNLSNL 483

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +L++S N L+ +P  +     L+ +++ +N  +L++LP  +G+L
Sbjct: 484 EKLNLSHNLLQGLPREIGQIEKLLFLSLEHN--ELQSLPVQLGHL 526



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/177 (38%), Positives = 106/177 (59%), Gaps = 4/177 (2%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLS--ENRIVAVPATIG 136
           +L+S+ E+ S+  T D+    K  + I  LP  +G LSSL  LDLS   N +  +P+ IG
Sbjct: 352 QLSSIPEIISQLTTLDILHLAK--NQIRKLPYELGVLSSLRELDLSLAGNMLQMIPSGIG 409

Query: 137 GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
               LKKL L+ N++  LP S+GDLL L  L L  N++ ALP  L +L  L+++++ +N 
Sbjct: 410 NFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLKQMNMSNNK 469

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           L  +  +IG+L +L+KL +  N L+ LP  IGQ   L  L +++N L++LP  +G +
Sbjct: 470 LRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNELQSLPVQLGHL 526



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 108/185 (58%), Gaps = 5/185 (2%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLH--ANRI 151
           +L   N  + +I   P+ I +L++L  L L++N+I  +P  +G LSSL++LDL    N +
Sbjct: 345 ELRFSNNQLSSI---PEIISQLTTLDILHLAKNQIRKLPYELGVLSSLRELDLSLAGNML 401

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             +P  IG+   L  L L  NQ++ LP ++  L+ LEEL L +N L +LP+ +G L +LK
Sbjct: 402 QMIPSGIGNFQGLKKLFLNDNQLAILPPSVGDLLELEELQLFNNELIALPERLGQLRNLK 461

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           ++ +  N L  +   IG  S+L +L + +N L+ LP  +G+I  L  LS+ +N ++ LP 
Sbjct: 462 QMNMSNNKLRVVLPAIGNLSNLEKLNLSHNLLQGLPREIGQIEKLLFLSLEHNELQSLPV 521

Query: 272 TMSSL 276
            +  L
Sbjct: 522 QLGHL 526



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 2/147 (1%)

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  +P  + ++  L+VL +  NNI ++PT + +L  L ++ +  N ++ +P S+     L
Sbjct: 3   LTEIPADIFELTELKVLWLHDNNISEIPTEIGNLQELNQIRLYNNNIKEIPSSISNLQKL 62

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + I NN  +L  LP  IGN   L  L +S N++  LP S    + LR L +  N L+V
Sbjct: 63  SVLWIQNN--ELEDLPEEIGNCTQLSVLSLSENRLTKLPYSLGQCTMLRELMIDHNELQV 120

Query: 363 PPRNIVEMGAQAVVQYMADLVEKRDAK 389
           PP  I  + A   +    + + K  A+
Sbjct: 121 PPDWIRNLQALTYMDVSHNSINKLPAE 147


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 100/324 (30%), Positives = 160/324 (49%), Gaps = 15/324 (4%)

Query: 65  MCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLS 124
           M  + Q GE L         +  +  G   ++L N+ + +I   P+ +  ++ L  LD+S
Sbjct: 340 MTFLKQQGENL---------QPQTVNGHLKIDLSNQGLTSI---PEEVFDITGLEVLDVS 387

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N + ++P  IG L  L ++D   N +  LP +IG L  L +L +  N+++ LP  +  L
Sbjct: 388 NNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICSL 447

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             LE L +G+N LS+LP  I  L  L  L +  N L+E+P  I    +L  L    NRL 
Sbjct: 448 CNLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLS 507

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP  VG++  L  L +  N +K LP  + SL +   LDVS N++ ++P     A  L +
Sbjct: 508 KLPPGVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVLDVSNNKVSTLPPGAKNA-NLRE 566

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           + + NN  D    P  +  L  +E+LDI  N I  LP +     +L  L V  NPL  PP
Sbjct: 567 VYLYNNKFD--TFPEVLCELPAMEKLDIRFNNISRLPTALHRADKLEDLDVSGNPLTYPP 624

Query: 365 RNIVEMGAQAVVQYMADLVEKRDA 388
           +++ + G  A++ ++      R +
Sbjct: 625 QDVCKQGTAAIMAFLKHETAARKS 648



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 136/283 (48%), Gaps = 4/283 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L+L N+ + +I   P+ +  ++ L  LD+S N++  +P  IG L  L  L  ++N 
Sbjct: 13  GLLKLDLSNQGLTSI---PEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLSAYSNM 69

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP +I  L  L  L +  N +S LP  L  L  LE L++ +N L+ LP  + S  +L
Sbjct: 70  LTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNL 129

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             L V  N L   P  + +   L +L +  N L  +P  V  +  LEVL V  N I++L 
Sbjct: 130 VVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLS 189

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN-NFADLRALPRSIGNLEMLEE 329
             ++ L+ L+ L V+    +  P  +    TL  +  G    +    +P  + +L+ L  
Sbjct: 190 DDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWY 249

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L + NN +R LP +   L  LRV+ +  N  +  P  + E+ A
Sbjct: 250 LSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPA 292



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 135/291 (46%), Gaps = 30/291 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LPD +  L +L  L++  N++  +P+ +    +L  L++  N++   P  +  L 
Sbjct: 91  NDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVFSCPNLVVLNVGNNKLSTFPAGVEKLQ 150

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N+++ +P  +  L  LE L +  N +  L D I  L  LK LIV     +E
Sbjct: 151 KLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNPIRRLSDDITRLTRLKSLIVADCHFDE 210

Query: 223 LPHTIGQCSSLREL---RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
            P  +    +L  L   +   ++   +P+ +  +  L  LS+  N ++ LP+TMS L +L
Sbjct: 211 FPRQVLHLKTLEVLYAGQAGGSKFDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNL 270

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R +++  N+ ++ PE LC                          L  ++ELDI NN I  
Sbjct: 271 RVVNLWNNQFDTFPEVLC-------------------------ELPAMKELDIKNNSITR 305

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
           LP +     +L  L V  NPL  PPR++   G +A++ ++    E    +T
Sbjct: 306 LPIALHRADKLEDLNVFGNPLTYPPRHV--QGTRAIMTFLKQQGENLQPQT 354


>gi|148679900|gb|EDL11847.1| mCG11661 [Mus musculus]
          Length = 1506

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 95  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 154

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 155 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 214

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 215 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 274

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 275 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 332

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 333 TIGYLHSLRTLAVDENFLPELPREI 357



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 143 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 202

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 203 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 262

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 263 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 322

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 323 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 380

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 381 GQMQRLRVLNLSDNRLK 397



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 224 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 283

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 284 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 343

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 344 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 403

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 404 TKLKELAALWLSDNQ 418



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 187 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 246

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 247 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 306

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 307 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 366

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 367 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 64  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 123

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 124 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 183

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 184 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 241

Query: 367 IVEM 370
           I ++
Sbjct: 242 IGKL 245


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 155/281 (55%), Gaps = 4/281 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L+L+N   +N   LP  +  LS+L +LDL  N++  +P  I  L +L+++ L  N   
Sbjct: 166 KELHLRN---NNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFH 222

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  +  L ++  L+L GN +  +P  + RL +L E++  +N +  LP  +G+L++L+ 
Sbjct: 223 HLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEV 282

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L  ++N L+ LP   G+   LR +    NR + +P ++  +  L VL++  NN+  +P  
Sbjct: 283 LYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKE 342

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA-DLRALPRSIGNLEMLEELD 331
           +++L  L+EL +S N  E  PE++C   +L K+ +G +    L ++P +I  L  L++L 
Sbjct: 343 VANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLC 402

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +  N +  LPDS   L  L  L   +N L+  P +I E+ A
Sbjct: 403 LEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICELKA 443



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 89/293 (30%), Positives = 153/293 (52%), Gaps = 27/293 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           ++++ LPD+I  L +L +L L  N +  +P  +G L  L+ LD+  N   ++P       
Sbjct: 56  NHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHLESLDVSNNPEFKIPLEHLLQL 115

Query: 156 ------------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
                             D +  LL+L  L L GNQ+  LP+   RL +L+EL L +NN 
Sbjct: 116 RQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVDLPIYTVRLNKLKELHLRNNNF 175

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           S+LP  + SL +L  L +E N L +LP+ I Q  +L+E+ +  N    LP  +  +  + 
Sbjct: 176 STLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIA 235

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL +  N++K++P  +  L+ LRE++ S N++E +P+ +     L  +   +NF  L++L
Sbjct: 236 VLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNF--LKSL 293

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P++ G L+ L  +D + N+   +P S  ML  L VL + +N L   P+ +  +
Sbjct: 294 PKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANL 346



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/286 (32%), Positives = 146/286 (51%), Gaps = 18/286 (6%)

Query: 68  VGQDGEKLSL---------IKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGK-LSS 117
           VGQ G   SL         I L  L+++   K  R  NL       +  +P+ I K L +
Sbjct: 88  VGQLGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLH------LGQVPEDILKWLLN 141

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L  L L+ N++V +P     L+ LK+L L  N    LP  +  L +L  LDL GN++  L
Sbjct: 142 LEILGLNGNQLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDL 201

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P  + +LV L+E+ L +N    LP  + +L ++  L +  N ++E+P  I + + LRE+ 
Sbjct: 202 PNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVN 261

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
              N+++ LP+ VG +  LEVL  + N +K LP     L  LR +D + N  E +P SLC
Sbjct: 262 FSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLC 321

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
               L  + + +N  +L  +P+ + NL  L+EL +S N     P++
Sbjct: 322 MLGNLAVLAMDDN--NLYHIPKEVANLRKLKELGLSGNVFEKFPEA 365



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 141/287 (49%), Gaps = 30/287 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ +P  I +L+ L  ++ S N+I  +P  +G L +L+ L   +N +  LP + G L 
Sbjct: 242 NHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQ 301

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L ++D   N+   +PV+L  L  L  L +  NNL  +P  + +L  LK+L +  N  E+
Sbjct: 302 RLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLKELGLSGNVFEK 361

Query: 223 LPHTIGQCSSLRELRVDYN---RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
            P  I    SL +L +  +   +L ++P  + K+ +L+ L + YN +  LP ++S L +L
Sbjct: 362 FPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNALTTLPDSISQLPAL 421

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             L    N L+ +P+S+C                          L+ L+ L + NN +  
Sbjct: 422 SRLSCHDNYLQKLPDSIC-------------------------ELKALKYLYLHNNLLTA 456

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           LP  F  L+ L+ LR+       PP ++  +G   + ++M  L+EKR
Sbjct: 457 LPSDFDFLTTLKELRIDAEKFAYPPADVCRIGFLGIREFM--LMEKR 501



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 120/218 (55%), Gaps = 6/218 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R++N  N   + IE LP  +G L +L  L    N + ++P   G L  L+ +D   NR  
Sbjct: 258 REVNFSN---NKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFE 314

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           E+P S+  L +L  L +  N +  +P  ++ L +L+EL L  N     P++I +L SL+K
Sbjct: 315 EMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEK 374

Query: 213 LIVETNDLEEL---PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +  +  ++L   P TI + +SL++L ++YN L  LP+++ ++  L  LS   N +++L
Sbjct: 375 LFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKL 434

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           P ++  L +L+ L +  N L ++P    F TTL ++ I
Sbjct: 435 PDSICELKALKYLYLHNNLLTALPSDFDFLTTLKELRI 472



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 131/301 (43%), Gaps = 50/301 (16%)

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
            ++ +  +P  +  L+ L++L L  N + ELPD+I  L +L  L L GN +  LP  + +
Sbjct: 31  GQHGLEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQ 90

Query: 184 LVRLEELD------------------------------------------------LGSN 195
           L  LE LD                                                L  N
Sbjct: 91  LGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGN 150

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L  LP     L  LK+L +  N+   LP  +   S+L  L ++ N+L  LP  + ++  
Sbjct: 151 QLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVN 210

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ + ++ N    LP  + +L ++  L++  N ++ +P  +C    L ++N  NN   + 
Sbjct: 211 LQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNN--KIE 268

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
            LP+ +G L  LE L   +N ++ LP +F  L RLR +   +N  E  P ++  +G  AV
Sbjct: 269 KLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAV 328

Query: 376 V 376
           +
Sbjct: 329 L 329



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 27/237 (11%)

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +  LP  L  L  LEEL L  N+L  LPD+I  L +L  L +  NDLE LP  +GQ   L
Sbjct: 35  LEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDLETLPPEVGQLGHL 94

Query: 234 RELRVDYN------------------------RLKALPEAVGK-IHTLEVLSVRYNNIKQ 268
             L V  N                         L  +PE + K +  LE+L +  N +  
Sbjct: 95  ESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNGNQLVD 154

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP     L+ L+EL +  N   ++P  +C  + L  +++  N   L  LP  I  L  L+
Sbjct: 155 LPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGN--KLHDLPNEIVQLVNLQ 212

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           E+ + NN    LP     L  + VL +  N ++  P +I  +     V +  + +EK
Sbjct: 213 EVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEK 269


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 157/303 (51%), Gaps = 28/303 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-IGDL 161
           + +  LP+SIG L  L  L L  N ++ +P ++     L  L+L  N I  LPD  +  L
Sbjct: 221 NRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLPDGFLSSL 280

Query: 162 LSLVYLDLRGNQISALPVA-------------------------LSRLVRLEELDLGSNN 196
            +L  + L  N+ S+ PV                           SR   L  L++ SN 
Sbjct: 281 TNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFEIFSRATHLSTLNMRSNQ 340

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+SLP  +GS  S+ +L + +N L  LP  IG+  SL+ L V  N L+ +P ++G++  L
Sbjct: 341 LTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNL 400

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           + L +  NN++ LP+ +  L+ LR+L +  N+L  +P  L   + L  + +G N   +R 
Sbjct: 401 QCLDLEENNLESLPSEIEHLTQLRKLKLQGNKLTVLPRGLGHLSNLTILAVGEN--QMRD 458

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP  IGNL+ LEEL +++N ++VLP    + ++L ++ V++ PL   P   VE G   ++
Sbjct: 459 LPNEIGNLKSLEELYLNDNPLQVLPFELALCTKLALMSVEDCPLSQIPTLAVEGGPSTIM 518

Query: 377 QYM 379
           QY+
Sbjct: 519 QYL 521



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 51/320 (15%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QNKL      +PD +G+L +L  L L+EN + ++PA++  L  LK LDL  N++ E+P  
Sbjct: 82  QNKLAK----VPDELGQLVNLTILALNENHLTSLPASLQNLKQLKMLDLRHNKLREVPQV 137

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +  L SL  L LR N+I+ +  A+  L  L +L +  N +  +P  IG L  L  + V  
Sbjct: 138 VYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLVTIDVSY 197

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N+L+E+P  IG C  +  L + YNRL  LPE++G +  L  L ++YN++  LP ++ +  
Sbjct: 198 NELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQNCV 257

Query: 278 SLRELDVSFNELESVPE----------SLCFA---------------TTLVKMNIGNNFA 312
            L +L++  N++E++P+          S+  A               T+L  +N+ +N  
Sbjct: 258 LLSDLNLENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQV 317

Query: 313 D----------------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           D                      L +LP  +G+ + + EL +++NQ+  LPD    L  L
Sbjct: 318 DRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQSL 377

Query: 351 RVLRVQENPLEVPPRNIVEM 370
           +VL V  N L   P +I ++
Sbjct: 378 QVLMVSNNLLRKIPGSIGQL 397



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 79/259 (30%), Positives = 131/259 (50%), Gaps = 26/259 (10%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           VS  K  +D  L    +D +  L  +I  ++ L  + L +N++  VP  +G L +L  L 
Sbjct: 44  VSKCKDNQDTRLDLSQLD-LTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILA 102

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L+ N +  LP S+ +L  L  LDLR N++  +P  + +L  L +L L  N ++++  +I 
Sbjct: 103 LNENHLTSLPASLQNLKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKITTIDPAIE 162

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           +L +L +LI+  N + E+P  IG+ + L  + V YN LK +PE +G    +  L ++YN 
Sbjct: 163 NLSNLTQLIIRENKVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNR 222

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           + QLP ++ +L  L  L + +N                          L  LPRS+ N  
Sbjct: 223 LTQLPESIGNLVKLNRLGLKYNH-------------------------LLGLPRSLQNCV 257

Query: 326 MLEELDISNNQIRVLPDSF 344
           +L +L++ NN I  LPD F
Sbjct: 258 LLSDLNLENNDIETLPDGF 276



 Score =  108 bits (270), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 80/242 (33%), Positives = 128/242 (52%), Gaps = 33/242 (13%)

Query: 94  DLNLQNKLMDNIEWLPDS-IGKLSSLVSLDLSENRIVAVPATIGG---LSSLKKLDLHAN 149
           DLNL+N   ++IE LPD  +  L++L S+ L+ N+  + P  +GG    +SL  L++  N
Sbjct: 261 DLNLEN---NDIETLPDGFLSSLTNLTSVTLARNKFSSYP--VGGPSQFTSLGTLNMEHN 315

Query: 150 RIIELPDSI-GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           ++  +P  I      L  L++R NQ+++LP+ +     + EL L SN L+ LPD IG L 
Sbjct: 316 QVDRIPFEIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRLPDDIGKLQ 375

Query: 209 SLKKLIV-----------------------ETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           SL+ L+V                       E N+LE LP  I   + LR+L++  N+L  
Sbjct: 376 SLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLESLPSEIEHLTQLRKLKLQGNKLTV 435

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP  +G +  L +L+V  N ++ LP  + +L SL EL ++ N L+ +P  L   T L  M
Sbjct: 436 LPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVLPFELALCTKLALM 495

Query: 306 NI 307
           ++
Sbjct: 496 SV 497



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 111/199 (55%), Gaps = 2/199 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  +D I +  +   + + L +L++  N++ ++P  +G   S+ +L L++N++  L
Sbjct: 310 LNMEHNQVDRIPF--EIFSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLNSNQLTRL 367

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD IG L SL  L +  N +  +P ++ +L  L+ LDL  NNL SLP  I  L  L+KL 
Sbjct: 368 PDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLESLPSEIEHLTQLRKLK 427

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           ++ N L  LP  +G  S+L  L V  N+++ LP  +G + +LE L +  N ++ LP  ++
Sbjct: 428 LQGNKLTVLPRGLGHLSNLTILAVGENQMRDLPNEIGNLKSLEELYLNDNPLQVLPFELA 487

Query: 275 SLSSLRELDVSFNELESVP 293
             + L  + V    L  +P
Sbjct: 488 LCTKLALMSVEDCPLSQIP 506


>gi|149026335|gb|EDL82578.1| rCG28757, isoform CRA_a [Rattus norvegicus]
          Length = 1506

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 95  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 154

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 155 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 214

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 215 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 274

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 275 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 332

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 333 TIGYLHSLRTLAVDENFLPELPREI 357



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 143 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 202

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 203 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 262

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 263 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 322

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 323 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 380

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 381 GQMQRLRVLNLSDNRLK 397



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 224 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 283

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 284 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 343

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 344 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 403

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 404 TKLKELAALWLSDNQ 418



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 187 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 246

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 247 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 306

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 307 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 366

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 367 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 422



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 64  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 123

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 124 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 183

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 184 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 241

Query: 367 IVEM 370
           I ++
Sbjct: 242 IGKL 245


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 143/260 (55%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N++  +P  I  L +L+ L L +NR+  LP+ I  L +L  L
Sbjct: 61  LPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVL 120

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  LP+ I
Sbjct: 121 DLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEI 180

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+    P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N
Sbjct: 181 EQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDN 240

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  +++   +  L  LP+ +G LE L+ LD+ NNQ++ LP     L
Sbjct: 241 QLITLPKEIEQLKNLKSLDLS--YNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQL 298

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+ L +  N L + P+ I
Sbjct: 299 KNLQTLFLSNNQLTILPQEI 318



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 151/287 (52%), Gaps = 5/287 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGQLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ L+L +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+L  +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 240 NQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN--QLKTLPKEIEQ 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++
Sbjct: 298 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 NLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+ LD+  N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+++P+ +     L  + + NN   L  LP+ IG L+ L  L +  NQ+  LP+    L
Sbjct: 287 QLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQL 344

Query: 348 SRLRVLRVQEN 358
             L+ L +  N
Sbjct: 345 KNLQTLNLWNN 355



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 115/207 (55%), Gaps = 3/207 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++   +  + LNL N   + +  LP+ I +L +L SL LSEN+    P  IG L +LK L
Sbjct: 156 DIEQLQNLKSLNLSN---NQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVL 212

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N+I  LP+ I  L  L YL L  NQ+  LP  + +L  L+ LDL  N L+ LP  +
Sbjct: 213 FLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEV 272

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L +  N L+ LP  I Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN
Sbjct: 273 GQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYN 332

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELES 291
            +  LP  +  L +L+ L++  N+  S
Sbjct: 333 QLTTLPNEIEQLKNLQTLNLWNNQFSS 359


>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 354

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 130/225 (57%), Gaps = 4/225 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           +G R L +    + ++   P  + +L+ L SL+L+EN I  VP TIG L+ L+ LDL  N
Sbjct: 114 RGLRHLAVGGNALTSV---PAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHN 170

Query: 150 RIIELPDSIGDLLSLV-YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
            +  +P++IGDL +L  YL L  N+ +++P +L  L RL  L+L  N L+ LP +IG L 
Sbjct: 171 ALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYLNLTDNRLTDLPAAIGGLT 230

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +L++L +  N L E+P TIG+   LREL +  N L  LP +VG +  L +L +R N I  
Sbjct: 231 ALRELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPASVGDLSGLRLLDLRNNAITS 290

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
           LP +++ LS L  LD+  N L  +P  L     L K+++  N  D
Sbjct: 291 LPGSLTGLSRLTHLDLRNNRLREIPGGLADLPALEKLDLRWNKLD 335



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 94/289 (32%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G+L  L  L L  NR+  +P  + GL++L+ L L  N +   P+S+  L  L  L
Sbjct: 38  LPEWVGRLPRLEDLRLDGNRLRDLP-DLHGLTALRALHLDGNALTRFPESVLRLPELRTL 96

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN I  LP  +  L  L  L +G N L+S+P  +  L  L  L +  N + E+P TI
Sbjct: 97  FLYGNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITEVPETI 156

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHT------------------------LEVLSVRY 263
           G+ + LR L + +N L  +PEA+G +                          L  L++  
Sbjct: 157 GRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYLNLTD 216

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L++LREL +  N L  +PE++     L ++++ NN   L  LP S+G+
Sbjct: 217 NRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNA--LTCLPASVGD 274

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           L  L  LD+ NN I  LP S   LSRL  L ++ N L   P  + ++ A
Sbjct: 275 LSGLRLLDLRNNAITSLPGSLTGLSRLTHLDLRNNRLREIPGGLADLPA 323



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 130/258 (50%), Gaps = 26/258 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP+ IG L  L  L +  N + +VPA +  L+ L  L+L  N I E+P++IG L  L
Sbjct: 103 IGELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITEVPETIGRLTEL 162

Query: 165 VYLDLRGNQISALPVALSRLVRLEE-LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
             LDL  N ++ +P A+  L  L + L L  N  +S+P S+G L  L  L +  N L +L
Sbjct: 163 RMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYLNLTDNRLTDL 222

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG  ++LRELR+  NRL+ +PE +G++  L  L +  N +  LP ++  LS LR LD
Sbjct: 223 PAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPASVGDLSGLRLLD 282

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +  N + S+P SL                           L  L  LD+ NN++R +P  
Sbjct: 283 LRNNAITSLPGSLT-------------------------GLSRLTHLDLRNNRLREIPGG 317

Query: 344 FRMLSRLRVLRVQENPLE 361
              L  L  L ++ N L+
Sbjct: 318 LADLPALEKLDLRWNKLD 335



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 139/264 (52%), Gaps = 4/264 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP   G  + L  +DL+ N +  +P  +G L  L+ L L  NR+ +LPD  G L +L  L
Sbjct: 15  LPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHG-LTALRAL 73

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN ++  P ++ RL  L  L L  N +  LP+ IG L  L+ L V  N L  +P  +
Sbjct: 74  HLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGL 133

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE-LDVSF 286
            + + L  L +  N +  +PE +G++  L +L + +N + ++P  +  LS+L + L +S 
Sbjct: 134 WRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSD 193

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N   SVP SL   T L  +N+ +N   L  LP +IG L  L EL +  N++R +P++   
Sbjct: 194 NRFTSVPASLGGLTRLTYLNLTDN--RLTDLPAAIGGLTALRELRLYGNRLREIPETIGR 251

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
           L  LR L +  N L   P ++ ++
Sbjct: 252 LRELRELHLMNNALTCLPASVGDL 275



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 92/180 (51%), Gaps = 3/180 (1%)

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           G  ++ALP        L  +DL  N L+ LP+ +G L  L+ L ++ N L +LP   G  
Sbjct: 9   GAGLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHG-L 67

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           ++LR L +D N L   PE+V ++  L  L +  N I +LP  +  L  LR L V  N L 
Sbjct: 68  TALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALT 127

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           SVP  L   T L  +N+  N   +  +P +IG L  L  LD+ +N +  +P++   LS L
Sbjct: 128 SVPAGLWRLTGLASLNLAEN--SITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNL 185



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 23/138 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD----------- 156
           +P S+G L+ L  L+L++NR+  +PA IGGL++L++L L+ NR+ E+P+           
Sbjct: 199 VPASLGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELREL 258

Query: 157 ------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                       S+GDL  L  LDLR N I++LP +L+ L RL  LDL +N L  +P  +
Sbjct: 259 HLMNNALTCLPASVGDLSGLRLLDLRNNAITSLPGSLTGLSRLTHLDLRNNRLREIPGGL 318

Query: 205 GSLISLKKLIVETNDLEE 222
             L +L+KL +  N L++
Sbjct: 319 ADLPALEKLDLRWNKLDD 336



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 95/194 (48%), Gaps = 3/194 (1%)

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
            E+      L++LP   G    L+++ +  N L ELP  +G+   L +LR+D NRL+ LP
Sbjct: 3   HEMKAPGAGLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLP 62

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
           +  G +  L  L +  N + + P ++  L  LR L +  N +  +PE +     L  + +
Sbjct: 63  DLHG-LTALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAV 121

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           G N   L ++P  +  L  L  L+++ N I  +P++   L+ LR+L +  N L   P  I
Sbjct: 122 GGNA--LTSVPAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAI 179

Query: 368 VEMGAQAVVQYMAD 381
            ++       Y++D
Sbjct: 180 GDLSNLTDYLYLSD 193


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 141/281 (50%), Gaps = 27/281 (9%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           S+ K  +L +L+LS N++  VP  IG L +L  LDL  N +  LP  IG+L +L  LDL 
Sbjct: 11  SVAKEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLS 70

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
           GNQ+  LP  + RL  L  L+L  N L+ LP  I  L +L  L +  N L ++P  IG+ 
Sbjct: 71  GNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKL 130

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +L  L +  N+L  LP  +G++  L +L++  N + QLP+ + +L +L  L +  N+L 
Sbjct: 131 KNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQL- 189

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
                                     LP  IG LE L+ L I NN++ +LP     L  L
Sbjct: 190 ------------------------IELPPEIGKLENLKTLYIDNNKLTILPPEISELKNL 225

Query: 351 RVLRVQENPLEVPPRNIVEMGAQAVVQYM--ADLVEKRDAK 389
             L +  NPL  PP  IV  G +A+  Y+  +   E  +AK
Sbjct: 226 ITLNLSANPLTSPPPEIVSRGLEAIFTYLNQSKTTENNEAK 266



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           ++  LI V+ +K   +LNL    +  +   P  IG+L +L  LDLSEN +  +P  IG L
Sbjct: 5   RVVQLISVAKEKNLTNLNLSGNQLTQV---PQEIGELKNLTMLDLSENTLTILPQEIGEL 61

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            +LK LDL  N++I+LP  IG L +L  L+L  NQ++ LP  +  L  L  L L +N L+
Sbjct: 62  KNLKTLDLSGNQLIQLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLT 121

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +P  IG L +L+ L +  N L +LP  IG+  +L  L ++ N+L  LP  +G +  LE 
Sbjct: 122 QIPPEIGKLKNLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLET 181

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           LS+  N + +LP  +  L +L+ L +  N+L  +P  +     L+ +N+  N
Sbjct: 182 LSLYRNQLIELPPEIGKLENLKTLYIDNNKLTILPPEISELKNLITLNLSAN 233



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 92/168 (54%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L +N++  +P  I  L +L  L L  N++ ++P  IG L +L  L
Sbjct: 77  LPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLKNLETL 136

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ++ LP  +  L  L  L L  N L+ LP  IG+L +L+ L +  N L ELP  I
Sbjct: 137 YIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIELPPEI 196

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           G+  +L+ L +D N+L  LP  + ++  L  L++  N +   P  + S
Sbjct: 197 GKLENLKTLYIDNNKLTILPPEISELKNLITLNLSANPLTSPPPEIVS 244


>gi|332026947|gb|EGI67044.1| Protein LAP2 [Acromyrmex echinatior]
          Length = 1016

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 140/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP +I  L +L  LDLS+N I  +P +I    SL+ +D+  N     PD+I 
Sbjct: 71  LSDNEIATLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L  L+L  NN+ +LP S+  L++L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  V +++ L       N I  LP  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             +++S NE+  +P++LC+  T+V + I +N   L ALP  IG +  LEEL I+ N +  
Sbjct: 251 GIMNLSSNEMYELPDTLCYLRTIVTLKIDDN--QLNALPNDIGQMSSLEELIITKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L    N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNADNNYLRALPAEI 336



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 153/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P  + +L RL   D   N + +LP  I     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ ELP T+    ++  L++D N+L ALP  +G++ +LE L +  N ++ LP
Sbjct: 251 GIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+   N L ++P  +   T+L  +++     +L  +P  +G+L  L  L
Sbjct: 311 SSIGLLRKLHCLNADNNYLRALPAEIGSCTSLSLLSLR--SNNLTRVPPELGHLSSLRVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 118/225 (52%), Gaps = 3/225 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+I+ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIRDLPRPLFQCHELRVLSLSDNEIATLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    SL+ + +  N  E  P  I     LREL ++   ++ LP   G++  L  L
Sbjct: 102 LPDSIKECKSLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALRTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRVPA 219

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           ++  L  L   D + N I  LP   R    + ++ +  N + E+P
Sbjct: 220 NVEQLYRLNHFDCTMNAIHALPMEIRGWRDIGIMNLSSNEMYELP 264



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 107/186 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P ++ +L  L   D + N I A+P  I G   +  ++L +N + ELPD++  L 
Sbjct: 212 NDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDIGIMNLSSNEMYELPDTLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L  + N L  
Sbjct: 272 TIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFLEYLPSSIGLLRKLHCLNADNNYLRA 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+SL  L +  N L  +P  +G + +L VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPAEIGSCTSLSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 90/157 (57%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           +G RD+ + N   + +  LPD++  L ++V+L + +N++ A+P  IG +SSL++L +  N
Sbjct: 245 RGWRDIGIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKN 304

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            +  LP SIG L  L  L+   N + ALP  +     L  L L SNNL+ +P  +G L S
Sbjct: 305 FLEYLPSSIGLLRKLHCLNADNNYLRALPAEIGSCTSLSLLSLRSNNLTRVPPELGHLSS 364

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L+ L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 365 LRVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401


>gi|328869502|gb|EGG17880.1| leucine-rich repeat-containing protein [Dictyostelium fasciculatum]
          Length = 399

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 169/307 (55%), Gaps = 32/307 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLS---SLKKLDLHANRIIELPDSIG 159
           +++  LP+ IGKLS++  LD+S+NRI ++P  I  LS   SL +LDL  N  +    S+ 
Sbjct: 70  NDLTTLPEEIGKLSNVQVLDVSKNRITSIPLEIEELSHMVSLTELDLKVNPPLSYVPSLA 129

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN-NLSSLPDSIGSLISLKKLIVETN 218
           +L  L  L +R  QIS LP+ +  L  L+ELD+  N  L  +P  IG+LI+L++L +  N
Sbjct: 130 NLRQLKKLSIRNLQISHLPMGVGLLSELQELDMRDNPQLKEVPYDIGTLINLQRLDLFGN 189

Query: 219 DLEELPHTIGQCSSLRELRVDYNRL--KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           ++  +P  IG   +L+ L +  N+L    +P+ +G++  L+ LS+  N +  LP  + +L
Sbjct: 190 NMRIIPREIGNLINLQSLDLRQNQLLIDNIPQELGRLVNLKKLSLSGNRLVALPAEVCTL 249

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           ++L+EL+ + N+L+++P  +     L K+N   N   L  LP SIG+L  L+  D  +N+
Sbjct: 250 TNLKELECANNQLQALPNEIGQLVALTKVNFSAN--KLTTLPASIGDLVELQLADFKSNE 307

Query: 337 IRVLPD-------------SFRMLSR-----------LRVLRVQENPLEVPPRNIVEMGA 372
           I  LP+             S  ML+            L +L V  NPL +PP  IV  G 
Sbjct: 308 IADLPETLGGWKNVTKIDLSHNMLTELPWELGQLEGTLTILDVGHNPLTIPPNPIVIKGT 367

Query: 373 QAVVQYM 379
           +A+VQ++
Sbjct: 368 EAIVQWL 374



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/158 (35%), Positives = 93/158 (58%), Gaps = 4/158 (2%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DL     L+DNI   P  +G+L +L  L LS NR+VA+PA +  L++LK+L+   N++  
Sbjct: 208 DLRQNQLLIDNI---PQELGRLVNLKKLSLSGNRLVALPAEVCTLTNLKELECANNQLQA 264

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+ IG L++L  ++   N+++ LP ++  LV L+  D  SN ++ LP+++G   ++ K+
Sbjct: 265 LPNEIGQLVALTKVNFSANKLTTLPASIGDLVELQLADFKSNEIADLPETLGGWKNVTKI 324

Query: 214 IVETNDLEELPHTIGQC-SSLRELRVDYNRLKALPEAV 250
            +  N L ELP  +GQ   +L  L V +N L   P  +
Sbjct: 325 DLSHNMLTELPWELGQLEGTLTILDVGHNPLTIPPNPI 362



 Score = 71.6 bits (174), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 106/216 (49%), Gaps = 34/216 (15%)

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           S+  + E +DL    +  LP +IG+L+  K+L++  NDL  LP  IG+ S+++ L V  N
Sbjct: 35  SKYRKREIVDLRKMEIDKLPPTIGALLC-KELLLAENDLTTLPEEIGKLSNVQVLDVSKN 93

Query: 242 RLKALP--------------------------EAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           R+ ++P                           ++  +  L+ LS+R   I  LP  +  
Sbjct: 94  RITSIPLEIEELSHMVSLTELDLKVNPPLSYVPSLANLRQLKKLSIRNLQISHLPMGVGL 153

Query: 276 LSSLRELDVSFN-ELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDIS 333
           LS L+ELD+  N +L+ VP  +     L ++++ GNN   +R +PR IGNL  L+ LD+ 
Sbjct: 154 LSELQELDMRDNPQLKEVPYDIGTLINLQRLDLFGNN---MRIIPREIGNLINLQSLDLR 210

Query: 334 NNQIRV--LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            NQ+ +  +P     L  L+ L +  N L   P  +
Sbjct: 211 QNQLLIDNIPQELGRLVNLKKLSLSGNRLVALPAEV 246


>gi|124486885|ref|NP_001074827.1| leucine-rich repeat-containing protein 7 [Mus musculus]
          Length = 1542

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 370 GQMQRLRVLNLSDNRLK 386



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 53  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 112

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 113 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 172

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 173 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 230

Query: 367 IVEM 370
           I ++
Sbjct: 231 IGKL 234


>gi|393912071|gb|EJD76579.1| leucine-rich repeat-containing protein 1 [Loa loa]
          Length = 1426

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 147/255 (57%), Gaps = 2/255 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++  +P  IG+L +L SL++ EN +  VP +I  L  L++LDL  N + +LP+ I  L +
Sbjct: 140 SLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLEN 199

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L +  N + ALP ++ +   LE+LD+  N L  LPD IG L  L  L V  N L+ L
Sbjct: 200 LEELYVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVL 259

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P +IG+   L  L+ D N +  L  A+G  H L  + +  N + ++P+++ +L SLR L+
Sbjct: 260 PSSIGRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLN 319

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +  N+L+ +P ++   T+L  +++ +N   +  LP  IG LE L  LD+ NN++  LP +
Sbjct: 320 LDKNQLKELPPTIGGCTSLSVLSLRDNL--IEQLPLEIGRLENLRVLDVCNNRLNYLPFT 377

Query: 344 FRMLSRLRVLRVQEN 358
             +L +LR L + EN
Sbjct: 378 VNVLFKLRALWLSEN 392



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 154/274 (56%), Gaps = 10/274 (3%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL+    +++  LP+ I     L  LDLS N I  +P TI  L+S+  L L+   + +
Sbjct: 87  ELNLKG---NDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMTSLGLNDISLTQ 143

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L +L  L++R N +  +P ++S+L +L  LDLG N L  LP+ I  L +L++L
Sbjct: 144 MPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPNEISMLENLEEL 203

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ NDLE LP +I QC SL +L V  N+L  LP+ +G +  L+ L+V  N ++ LP+++
Sbjct: 204 YVDQNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSI 263

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L  L    N +  +  ++     L ++ +  N   L  +P S+GNL+ L  L++ 
Sbjct: 264 GRLKKLSMLKADRNAITQLTPAIGSCHALTEIYLTENL--LTEIPSSLGNLKSLRTLNLD 321

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQEN-----PLEV 362
            NQ++ LP +    + L VL +++N     PLE+
Sbjct: 322 KNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEI 355



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 149/269 (55%), Gaps = 3/269 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           R +++ ++   N++ +P  I + + +L  + L  N I  +   +     LK L L  N +
Sbjct: 13  RQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           I LP  I  L  L  L+L+GN +S LP  +   ++L+ LDL SN ++ LP +I  L S+ 
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPPTISQLTSMT 132

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +    L ++PH IGQ  +LR L V  N L+ +P ++ ++  L  L + +N +  LP 
Sbjct: 133 SLGLNDISLTQMPHDIGQLRNLRSLEVRENLLRTVPPSISQLKQLRRLDLGHNELDDLPN 192

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +S L +L EL V  N+LE++PES+    +L ++++  N   L  LP  IG+LE L++L 
Sbjct: 193 EISMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSEN--KLMLLPDEIGDLEKLDDLT 250

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +S N ++VLP S   L +L +L+   N +
Sbjct: 251 VSQNCLQVLPSSIGRLKKLSMLKADRNAI 279



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 120/208 (57%), Gaps = 3/208 (1%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           +S  K  R L+L +  +D+   LP+ I  L +L  L + +N + A+P +I    SL++LD
Sbjct: 171 ISQLKQLRRLDLGHNELDD---LPNEISMLENLEELYVDQNDLEALPESIVQCRSLEQLD 227

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           +  N+++ LPD IGDL  L  L +  N +  LP ++ RL +L  L    N ++ L  +IG
Sbjct: 228 VSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRLKKLSMLKADRNAITQLTPAIG 287

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           S  +L ++ +  N L E+P ++G   SLR L +D N+LK LP  +G   +L VLS+R N 
Sbjct: 288 SCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNL 347

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVP 293
           I+QLP  +  L +LR LDV  N L  +P
Sbjct: 348 IEQLPLEIGRLENLRVLDVCNNRLNYLP 375



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/191 (38%), Positives = 111/191 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++E LP+SI +  SL  LD+SEN+++ +P  IG L  L  L +  N +  LP SIG L
Sbjct: 207 QNDLEALPESIVQCRSLEQLDVSENKLMLLPDEIGDLEKLDDLTVSQNCLQVLPSSIGRL 266

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L    N I+ L  A+     L E+ L  N L+ +P S+G+L SL+ L ++ N L+
Sbjct: 267 KKLSMLKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLK 326

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ELP TIG C+SL  L +  N ++ LP  +G++  L VL V  N +  LP T++ L  LR 
Sbjct: 327 ELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRA 386

Query: 282 LDVSFNELESV 292
           L +S N+ +++
Sbjct: 387 LWLSENQSQAM 397



 Score = 41.6 bits (96), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  R LNL     + ++ LP +IG  +SL  L L +N I  +P  IG L +L+ LD+  N
Sbjct: 313 KSLRTLNLDK---NQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNN 369

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISAL 177
           R+  LP ++  L  L  L L  NQ  A+
Sbjct: 370 RLNYLPFTVNVLFKLRALWLSENQSQAM 397


>gi|28972728|dbj|BAC65780.1| mKIAA1365 protein [Mus musculus]
          Length = 1497

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 86  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 145

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 146 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 205

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 206 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 265

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 266 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 323

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 324 TIGYLHSLRTLAVDENFLPELPREI 348



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 134 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 193

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 194 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 253

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 254 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 313

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 314 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 371

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 372 GQMQRLRVLNLSDNRLK 388



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 215 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 274

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 275 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 334

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 335 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 394

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 395 TKLKELAALWLSDNQ 409



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 178 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 237

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 238 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 297

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 298 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 357

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 358 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 55  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 114

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 115 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 174

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 175 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 232

Query: 367 IVEM 370
           I ++
Sbjct: 233 IGKL 236


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + +L  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +  G+    L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQML--GSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLT---VLPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/354 (27%), Positives = 163/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +   P  IG+L +L  L   ENR+ A+P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVFPKEIGQLQNLQMLGSPENRLTALPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS---------------------- 175
           L +L+ L+L  NR+   P  IG L +L  L+L  N +S                      
Sbjct: 277 LQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 176 ------------------------------ALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                         + P  + +   L  L+L     S+LP  I 
Sbjct: 337 ENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  L   IG L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLTAEIGQLQ 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/305 (31%), Positives = 145/305 (47%), Gaps = 54/305 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLD--------------LRGNQI-----S 175
            DL                        LSL Y D              LRG  +     S
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L ++P  IG L +L+ L +E N+LE LP  IGQ  +L++
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++   
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IGQLQNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QENPL 360
           Q N L
Sbjct: 568 QNNQL 572



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 131/243 (53%), Gaps = 6/243 (2%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L   ++  LP  IG L +L  L+L+ N ++ LP  + +L  L+ELDL  N L++ P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L  L+ L +  N L  LP+ IGQ  +L++L +  N+L   P+ +G++  L+ L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+  N+  ++P+ +     L  +N+ +N   L  LP  IG 
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDN--QLATLPVEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L+ L+EL + NN++ V P     L  L++L   EN L   P+   EMG    +Q + +LV
Sbjct: 231 LQNLQELYLRNNRLTVFPKEIGQLQNLQMLGSPENRLTALPK---EMGQLQNLQTL-NLV 286

Query: 384 EKR 386
             R
Sbjct: 287 NNR 289



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 2/226 (0%)

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           ++ A    +L  ++ + L++  L+L G +++ALP  + +L  L+EL+L  N L+ LP  I
Sbjct: 31  EVEAGTYRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEI 90

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKN 150

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L
Sbjct: 151 KLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQL 208

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L++ +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 209 QNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/246 (29%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 98/192 (51%), Gaps = 4/192 (2%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           + LS  ++ +E++ G+     L  ++ + ++++ L +    L  LP  IGQ  +L+EL +
Sbjct: 21  ITLSCEIQADEVEAGT--YRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNL 78

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            +N L  LP+ +G++  L+ L +R N +   P  +  L  L  LD+S N L  +P  +  
Sbjct: 79  KWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQ 138

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  + +  N   L   P+ IG L+ L++L +S N++  LP     L  L+ L +Q+N
Sbjct: 139 LQNLQDLGLYKN--KLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 359 PLEVPPRNIVEM 370
                P+ I ++
Sbjct: 197 QFTTLPKEIGQL 208


>gi|255078974|ref|XP_002503067.1| predicted protein [Micromonas sp. RCC299]
 gi|226518333|gb|ACO64325.1| predicted protein [Micromonas sp. RCC299]
          Length = 252

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 134/215 (62%), Gaps = 3/215 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + +LS++  L L +N++  VPA IG L+SL+ L+L+ N++  LP  +G L +L  L
Sbjct: 20  VPAEVWRLSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKEL 79

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSN-NLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
            L GNQ++++P  + +L  L EL+LG    L+S+P  +G L SL++L +  N L  +P  
Sbjct: 80  SLYGNQLTSVPAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVPAE 139

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IGQ +SLREL ++YN+L ++P  +G++ +L  L +  N +  +P  +  L+SL  L +  
Sbjct: 140 IGQLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQLTSLEGLWLHA 199

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           N+L SVP  +   T+L K+ +G+N   L ++P +I
Sbjct: 200 NQLTSVPAEIGQLTSLEKLYLGDN--RLTSVPAAI 232



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 126/219 (57%), Gaps = 3/219 (1%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           AVPA +  LS+++KL L  N++  +P  IG L SL  L+L  NQ+++LP  + +L  L+E
Sbjct: 19  AVPAEVWRLSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKE 78

Query: 190 LDLGSNNLSSLPDSIGSLISLKKL-IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           L L  N L+S+P  IG L SL +L +     L  +P  +GQ +SL  L +  NRL ++P 
Sbjct: 79  LSLYGNQLTSVPAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVPA 138

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            +G++ +L  L + YN +  +P  +  L SLR L ++ N L SVP  +   T+L  + + 
Sbjct: 139 EIGQLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQLTSLEGLWLH 198

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            N   L ++P  IG L  LE+L + +N++  +P + R L
Sbjct: 199 AN--QLTSVPAEIGQLTSLEKLYLGDNRLTSVPAAIREL 235



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/167 (37%), Positives = 98/167 (58%), Gaps = 4/167 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR-IVAVPATIGGLSSLKK 143
           EV      ++L+L    + ++   P  IG+L+SL  L+L   + + +VPA +G L+SL++
Sbjct: 69  EVGQLTALKELSLYGNQLTSV---PAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLER 125

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L LH NR+  +P  IG L SL  L L  NQ++++P  + +L  L  L L  N L+S+P  
Sbjct: 126 LWLHDNRLTSVPAEIGQLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPAD 185

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           IG L SL+ L +  N L  +P  IGQ +SL +L +  NRL ++P A+
Sbjct: 186 IGQLTSLEGLWLHANQLTSVPAEIGQLTSLEKLYLGDNRLTSVPAAI 232



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G +  LE+  V     + +P  +  LS++R+L +  N+L  VP  +   T+L  +N+  N
Sbjct: 4   GGVAELELDEVSLT--RAVPAEVWRLSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNL--N 59

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
           +  L +LP  +G L  L+EL +  NQ+  +P     L+ L
Sbjct: 60  YNQLTSLPAEVGQLTALKELSLYGNQLTSVPAEIGQLASL 99


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/287 (31%), Positives = 167/287 (58%), Gaps = 4/287 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + +  L +L  LD+ +N++ ++P+ +G L +L+KLD+  N++  +P+ +  L 
Sbjct: 224 NQLQCLSEDVRLLPALSVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLKSIPEELLQLS 283

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L+ N++S LP    +LV LEELDL +N+L+ +P S   LI+L +L +  N L+ 
Sbjct: 284 HLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLTDIPTSFALLINLVRLNLACNQLKN 343

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    SL++L    N L+ +P  +  + +LE L +R N ++ LP  + S   L+EL
Sbjct: 344 LPADISAMKSLKQLDCTKNYLETVPSELASMASLEQLYLRKNKLRSLP-ELPSCKLLKEL 402

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E +  E+L    +L  + + +N   ++++P  I  L+ LE LD++NN I  LP
Sbjct: 403 HAGENQIEILNAENLKHLNSLSVLELRDN--KIKSVPDEITLLQKLERLDLANNDISRLP 460

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
            +   LS+L+ L ++ NPL    R++++ G Q +++Y+   ++   A
Sbjct: 461 YTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDDTA 507



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 79/312 (25%), Positives = 145/312 (46%), Gaps = 48/312 (15%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP--- 155
           N   + ++ LP  I  + SL  LD ++N +  VP+ +  ++SL++L L  N++  LP   
Sbjct: 335 NLACNQLKNLPADISAMKSLKQLDCTKNYLETVPSELASMASLEQLYLRKNKLRSLPELP 394

Query: 156 --------------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
                               +++  L SL  L+LR N+I ++P  ++ L +LE LDL +N
Sbjct: 395 SCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANN 454

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK----------- 244
           ++S LP ++G+L  LK L +E N L  +   + Q  +   L+   +R++           
Sbjct: 455 DISRLPYTLGNLSQLKFLALEGNPLRAIRRDLLQKGTQELLKYLRSRIQDDTASPNEEPP 514

Query: 245 ----ALPEA----VGKIHTLEVLSVRYNNIKQLPTTMSSL---SSLRELDVSFNELESVP 293
                LP      +  I TL++L         +P  M +    + +  ++ S N+L ++P
Sbjct: 515 VTAMTLPSESKINMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTAIP 574

Query: 294 ESLC-FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
             +     ++  +N G  F  + ++   +  L  L  LDI NN +  LP+    L+RL+V
Sbjct: 575 PRIVELKDSVCDVNFG--FNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQV 632

Query: 353 LRVQENPLEVPP 364
           + +  N  +V P
Sbjct: 633 INLSFNRFKVFP 644



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 79/304 (25%), Positives = 135/304 (44%), Gaps = 25/304 (8%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           +L DN I+ +PD I  L  L  LDL+ N I  +P T+G LS LK L L  N +  +   +
Sbjct: 427 ELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRAIRRDL 486

Query: 159 ---GDLLSLVYLDLRGNQISALP----------------VALSRLVRLEELDLGSNNLSS 199
              G    L YL  R    +A P                + +  +  L+ L+      + 
Sbjct: 487 LQKGTQELLKYLRSRIQDDTASPNEEPPVTAMTLPSESKINMHAITTLKLLEFSEKQAAV 546

Query: 200 LPDSIGSLIS---LKKLIVETNDLEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHT 255
           +PD + + +    +  +    N L  +P  I +   S+ ++   +N++ ++   +  +H 
Sbjct: 547 IPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCTLHK 606

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +R N +  LP  M +L+ L+ +++SFN  +  P  L    TL  + + NN     
Sbjct: 607 LTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVLYRILTLETILLSNNQVG-S 665

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
             P  +  +E L  LD+ NN +  +P        LR L ++ NP   P   I+  G  AV
Sbjct: 666 VDPLQLKKMEQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNPFRTPRAAILAKGTAAV 725

Query: 376 VQYM 379
           ++Y+
Sbjct: 726 LEYL 729


>gi|223459922|gb|AAI38451.1| Lrrc7 protein [Mus musculus]
          Length = 1398

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 370 GQMQRLRVLNLSDNRLK 386



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 53  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 112

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 113 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 172

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 173 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 230

Query: 367 IVEM 370
           I ++
Sbjct: 231 IGKL 234


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVLPKEIGQL 300



 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 243 RLTVLPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L  L   ENR+ A+P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 277 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 369 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 428

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 429 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 488

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 489 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 547

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 548 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 583



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|427791781|gb|JAA61342.1| Putative cytoskeletal regulator flightless-i, partial
           [Rhipicephalus pulchellus]
          Length = 956

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/276 (35%), Positives = 149/276 (53%), Gaps = 6/276 (2%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            G R LNL +   ++I+ LP ++  L SL  LD+S+N ++ +P  I G   L  ++   N
Sbjct: 58  HGLRKLNLSD---NDIQTLPPALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVN 114

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            + +LP+    LL++  L L    +  LP    RL +L+ L+L  N+L  LP S+  L  
Sbjct: 115 PVGKLPEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTE 174

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +L +  ND  ELP  IG   SL EL  D NRL +LP  +G +  L  L    N I  +
Sbjct: 175 LSRLDIGQNDFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFI 234

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
              + +++ L +L ++ N+L+ +PE+L F   L  + + +N   L  LP SIG L  LEE
Sbjct: 235 ADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNH--LATLPDSIGQLSKLEE 292

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPP 364
           L I++N+I  LP +  +L  L +L   +N LE +PP
Sbjct: 293 LIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPP 328



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 152/269 (56%), Gaps = 4/269 (1%)

Query: 92  TRDLNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           T+ LN++   +++  +E+LP + G+LS L  L+L EN +  +P ++  L+ L +LD+  N
Sbjct: 124 TQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQN 183

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
              ELP+ IG L SL  L    N++++LP  +  L++L  LD   N +S + D I ++  
Sbjct: 184 DFTELPEVIGSLPSLTELWCDSNRLTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTM 243

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L  L + TN L+++P T+G   +L  LR+D N L  LP+++G++  LE L +  N I  L
Sbjct: 244 LSDLTLTTNKLQKIPETLGFLQNLTTLRLDDNHLATLPDSIGQLSKLEELIINSNEIDSL 303

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P+T+  L +L  L    N LE +P  +   + L  +++ +N   L  +P  +G+L  L  
Sbjct: 304 PSTIGLLRNLTLLMADDNLLEDLPPEIGSCSKLRVLSLRDNR--LCNVPDELGHLSSLRV 361

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           +++S NQ+R LP S   L  L  L + +N
Sbjct: 362 VNLSGNQLRHLPVSLAKLGGLHALWLSQN 390



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 67/181 (37%), Positives = 108/181 (59%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L  L  LD S NRI  +   I  ++ L  L L  N++ ++P+++G L +L  L
Sbjct: 211 LPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNKLQKIPETLGFLQNLTTL 270

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP ++ +L +LEEL + SN + SLP +IG L +L  L+ + N LE+LP  I
Sbjct: 271 RLDDNHLATLPDSIGQLSKLEELIINSNEIDSLPSTIGLLRNLTLLMADDNLLEDLPPEI 330

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G CS LR L +  NRL  +P+ +G + +L V+++  N ++ LP +++ L  L  L +S N
Sbjct: 331 GSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKLGGLHALWLSQN 390

Query: 288 E 288
           +
Sbjct: 391 Q 391



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 130/242 (53%), Gaps = 3/242 (1%)

Query: 121 LDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           LD + + +  VP+ +     +L++L L+AN+I +LP  +     L  L+L  N I  LP 
Sbjct: 16  LDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQTLPP 75

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ALS L+ LEELD+  NN+  +PD+I     L  +    N + +LP    Q  ++ +L ++
Sbjct: 76  ALSSLISLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLLNIEQLYLN 135

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
              L+ LP   G++  L++L +R N++K LP +M+ L+ L  LD+  N+   +PE +   
Sbjct: 136 DTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELSRLDIGQNDFTELPEVIGSL 195

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            +L ++   +N   L +LP  +G+L  L  LD S N+I  + D    ++ L  L +  N 
Sbjct: 196 PSLTELWCDSNR--LTSLPSYMGHLIKLTYLDASRNRISFIADEIENMTMLSDLTLTTNK 253

Query: 360 LE 361
           L+
Sbjct: 254 LQ 255



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 85/173 (49%), Gaps = 33/173 (19%)

Query: 229 QCSSLR----ELRV-DY--NRLKALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            C  LR    E+RV DY  + L+ +P E      TLE L +  N IK LP  +     LR
Sbjct: 2   HCPCLRPAREEVRVLDYAHHGLEDVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLR 61

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +L++S N+++++P +L    +L +++I  N  ++  +P +I   + L  ++ S N +  L
Sbjct: 62  KLNLSDNDIQTLPPALSSLISLEELDISKN--NVIEIPDNIKGCKCLSIVEASVNPVGKL 119

Query: 341 PDSFRM-----------------------LSRLRVLRVQENPLEVPPRNIVEM 370
           P+ F                         LS+L++L ++EN L+V P+++  +
Sbjct: 120 PEGFTQLLNIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARL 172



 Score = 46.2 bits (108), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 32/76 (42%), Positives = 42/76 (55%), Gaps = 1/76 (1%)

Query: 103 DNI-EWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           DN+ E LP  IG  S L  L L +NR+  VP  +G LSSL+ ++L  N++  LP S+  L
Sbjct: 320 DNLLEDLPPEIGSCSKLRVLSLRDNRLCNVPDELGHLSSLRVVNLSGNQLRHLPVSLAKL 379

Query: 162 LSLVYLDLRGNQISAL 177
             L  L L  NQ   L
Sbjct: 380 GGLHALWLSQNQTKPL 395


>gi|16924000|ref|NP_476483.1| leucine-rich repeat-containing protein 7 [Rattus norvegicus]
 gi|1657758|gb|AAC52881.1| densin-180 [Rattus norvegicus]
 gi|149026336|gb|EDL82579.1| rCG28757, isoform CRA_b [Rattus norvegicus]
          Length = 1495

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 84  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 143

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 144 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 203

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 204 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 263

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 264 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 321

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 322 TIGYLHSLRTLAVDENFLPELPREI 346



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 132 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 192 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 252 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 312 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 369

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 370 GQMQRLRVLNLSDNRLK 386



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 213 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 272

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 273 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 332

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 333 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 392

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 393 TKLKELAALWLSDNQ 407



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 176 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 235

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 236 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 295

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 296 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 355

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 356 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 411



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 53  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 112

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 113 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 172

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 173 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 230

Query: 367 IVEM 370
           I ++
Sbjct: 231 IGKL 234


>gi|195399814|ref|XP_002058514.1| GJ14282 [Drosophila virilis]
 gi|194142074|gb|EDW58482.1| GJ14282 [Drosophila virilis]
          Length = 750

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 117/373 (31%), Positives = 197/373 (52%), Gaps = 21/373 (5%)

Query: 29  SFIPLFSSFCLLLTDFLI--------LQLGSIIFRNK----VPIMIMCMCCVGQDGEKLS 76
           SF P+F     +  D L+         + G++   NK    VP  I  +    +D +K +
Sbjct: 35  SFQPVFHERTNMEDDALLSDNLWKLARKTGTLNMTNKGMSRVPERIYDINEPDEDSKKAN 94

Query: 77  LIKLASLIEVS--SKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT 134
           L++L+   E +  ++    +L+L +  + +I      I  L +L  L L +N +VA+P  
Sbjct: 95  LVQLSISEEDAWWNQVPLENLDLSSNALSHIS---PKIENLLTLTVLQLHDNALVALPPE 151

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           IG L  L +L+L  N++ ELP  +  L  L +L++  N+   L   +S L  LE LD G+
Sbjct: 152 IGKLEKLVRLNLGHNKLSELPIELFSLPELRHLNISHNEFIELNPDISNLHMLEFLDAGN 211

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           NN++SLP  IG L+ L  L++  N ++ELP  I    SL++L +  N L  LPE +G + 
Sbjct: 212 NNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLIGLPEDMGLLR 271

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK-MNIGNNFAD 313
            L+ L +++N+IK+LP    +  +L EL  S N +E VP+ LC     +K +++ +N   
Sbjct: 272 KLQCLYIQHNDIKELPDFEGN-EALNELHASNNFIERVPKDLCANLPHLKILDLRDN--K 328

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           +  LP  +  L  L  LD+SNN I VLP +   L+ L  L+V  NP++   R+I++ G  
Sbjct: 329 ITQLPDEVCLLRNLNRLDVSNNSISVLPVTLASLAHLISLQVDGNPIKTIRRDILQCGTA 388

Query: 374 AVVQYMADLVEKR 386
            +++ + D  + +
Sbjct: 389 RILKTLQDRAQAK 401



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 6/184 (3%)

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLS---LVYLDLRGNQISALPVALSRLVRL-EELDLG 193
           L   + L ++   + ++P  + +L S   +  +D   NQ+SA P  L R+  L  EL L 
Sbjct: 546 LRHTRTLAVNLENLTDVPTHVFELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLA 605

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
            N ++S+P  I     +  L +  N +++LP   G  ++LREL +  NR + LP+ + ++
Sbjct: 606 HNVIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYLPKGLYEL 665

Query: 254 HTLEVLSVRYNNIKQLPTT-MSSLSSLRELDVSFNELESVPESLCFATTLVKMN-IGNNF 311
             LE+L    N+IK L    + SL  L  LD+  N++E VP  L   T +  +  +GN F
Sbjct: 666 QGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDIEYVPPILGNLTNITHLELVGNPF 725

Query: 312 ADLR 315
              R
Sbjct: 726 RQPR 729



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 17/198 (8%)

Query: 196 NLSSLPDSIGSLISLKKLIV---ETNDLEELPHTIGQCSSL-RELRVDYNRLKALPEAVG 251
           NL+ +P  +  L S +K+ V     N L   P  + + S+L  EL + +N + ++P  + 
Sbjct: 558 NLTDVPTHVFELASAEKVHVVDFARNQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFIS 617

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           +   +  L++  N IK LP     L++LREL+++ N  E +P+ L     L  +   +N 
Sbjct: 618 QFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYLPKGLYELQGLEILVASDNH 677

Query: 312 ------ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
                 A L +LPR       L  LD+ NN I  +P     L+ +  L +  NP   P  
Sbjct: 678 IKALNVAGLESLPR-------LNTLDLRNNDIEYVPPILGNLTNITHLELVGNPFRQPRH 730

Query: 366 NIVEMGAQAVVQYMADLV 383
            I+  G  A++ Y+ D +
Sbjct: 731 QILMKGTDAIMSYLRDRI 748



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 65/124 (52%), Gaps = 1/124 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P  I + + +  L+LS N I  +P   G L++L++L++  NR   LP  + +L  L
Sbjct: 609 IASVPTFISQFTRITFLNLSNNVIKDLPPEFGLLNTLRELNIANNRFEYLPKGLYELQGL 668

Query: 165 VYLDLRGNQISALPVA-LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
             L    N I AL VA L  L RL  LDL +N++  +P  +G+L ++  L +  N   + 
Sbjct: 669 EILVASDNHIKALNVAGLESLPRLNTLDLRNNDIEYVPPILGNLTNITHLELVGNPFRQP 728

Query: 224 PHTI 227
            H I
Sbjct: 729 RHQI 732



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 2/138 (1%)

Query: 103 DNIEWLPDSIGKLSSLVS-LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + +   P  + ++S+LV+ L L+ N I +VP  I   + +  L+L  N I +LP   G L
Sbjct: 583 NQLSAFPPGLQRMSNLVTELVLAHNVIASVPTFISQFTRITFLNLSNNVIKDLPPEFGLL 642

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP-DSIGSLISLKKLIVETNDL 220
            +L  L++  N+   LP  L  L  LE L    N++ +L    + SL  L  L +  ND+
Sbjct: 643 NTLRELNIANNRFEYLPKGLYELQGLEILVASDNHIKALNVAGLESLPRLNTLDLRNNDI 702

Query: 221 EELPHTIGQCSSLRELRV 238
           E +P  +G  +++  L +
Sbjct: 703 EYVPPILGNLTNITHLEL 720



 Score = 41.2 bits (95), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 47/83 (56%), Gaps = 8/83 (9%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL---DLHAN 149
           R+LN+ N   +  E+LP  + +L  L  L  S+N I A+   + GL SL +L   DL  N
Sbjct: 646 RELNIAN---NRFEYLPKGLYELQGLEILVASDNHIKAL--NVAGLESLPRLNTLDLRNN 700

Query: 150 RIIELPDSIGDLLSLVYLDLRGN 172
            I  +P  +G+L ++ +L+L GN
Sbjct: 701 DIEYVPPILGNLTNITHLELVGN 723


>gi|322785453|gb|EFZ12124.1| hypothetical protein SINV_08215 [Solenopsis invicta]
          Length = 1015

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/268 (34%), Positives = 140/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP +I  L +L  L+LS+N I  +P +I    SL+ +D+  N     PD+I 
Sbjct: 71  LSDNEITTLPPAIASLINLEYLELSKNSIKDLPDSIKECKSLRSIDISVNPFDRFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L L    I  LP    RL  L  L+L  NN+ +LP S+  L++L++L +  ND
Sbjct: 131 HIVGLRELYLNDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  V +++ L       N I  LP  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             +++S NE+  +P++LC+  T+V + I +N   L ALP  IG +  LEEL I+ N I  
Sbjct: 251 AIMNLSSNEMYELPDTLCYLRTIVTLKIDDN--QLNALPNDIGQMSSLEELIITKNFIEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L    N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNADNNYLRALPAEI 336



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 153/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L L +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYLNDAY---IEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P  + +L RL   D   N + +LP  I     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ ELP T+    ++  L++D N+L ALP  +G++ +LE L +  N I+ LP
Sbjct: 251 AIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFIEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+   N L ++P  +   T+L  +++     +L  +P  +G+L  L  L
Sbjct: 311 SSIGLLRKLHCLNADNNYLRALPAEIGSCTSLSLLSLR--SNNLSRVPPELGHLSSLRVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNAIKFLPVSMLNLSNLKALWLSDN 396



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 25/256 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+I+ LP A++ L+ LE L+L  N++  
Sbjct: 42  TLEKLYLDANRIRDLPRPLFQCHELRVLSLSDNEITTLPPAIASLINLEYLELSKNSIKD 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    SL+ + +  N  +  P  I     LREL ++   ++ LP   G++  L  L
Sbjct: 102 LPDSIKECKSLRSIDISVNPFDRFPDAITHIVGLRELYLNDAYIEYLPANFGRLSALRTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRVPA 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           ++  L  L   D                       +S+N++  LPD+   L  +  L++ 
Sbjct: 220 NVEQLYRLNHFDCTMNAIHALPMEIRGWRDIAIMNLSSNEMYELPDTLCYLRTIVTLKID 279

Query: 357 ENPLEVPPRNIVEMGA 372
           +N L   P +I +M +
Sbjct: 280 DNQLNALPNDIGQMSS 295



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 107/186 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P ++ +L  L   D + N I A+P  I G   +  ++L +N + ELPD++  L 
Sbjct: 212 NDIRRVPANVEQLYRLNHFDCTMNAIHALPMEIRGWRDIAIMNLSSNEMYELPDTLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N +  LP SIG L  L  L  + N L  
Sbjct: 272 TIVTLKIDDNQLNALPNDIGQMSSLEELIITKNFIEYLPSSIGLLRKLHCLNADNNYLRA 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+SL  L +  N L  +P  +G + +L VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPAEIGSCTSLSLLSLRSNNLSRVPPELGHLSSLRVLNLVNNAIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 90/157 (57%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           +G RD+ + N   + +  LPD++  L ++V+L + +N++ A+P  IG +SSL++L +  N
Sbjct: 245 RGWRDIAIMNLSSNEMYELPDTLCYLRTIVTLKIDDNQLNALPNDIGQMSSLEELIITKN 304

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            I  LP SIG L  L  L+   N + ALP  +     L  L L SNNLS +P  +G L S
Sbjct: 305 FIEYLPSSIGLLRKLHCLNADNNYLRALPAEIGSCTSLSLLSLRSNNLSRVPPELGHLSS 364

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L+ L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 365 LRVLNLVNNAIKFLPVSMLNLSNLKALWLSDNQSQPL 401


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVLPKEIGQL 300



 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 243 RLTVLPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L  L   ENR+ A+P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 277 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 369 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 428

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 429 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 488

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 489 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 547

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 548 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 583



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 254



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 101/299 (33%), Positives = 164/299 (54%), Gaps = 11/299 (3%)

Query: 93  RDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           +DL+L QNKL      LPD  G L+ L+ LD+S+N++   P TI  L  L+ LDL AN++
Sbjct: 679 KDLDLKQNKLT----TLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQL 734

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             L   IG++ SL  L L  N++ ALP  L  L  L EL L  N L ++P  + +L++LK
Sbjct: 735 TVLAPEIGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLK 794

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L + TN+ +  P       +L  L +  N++K L   +G + TL+ L++  N + +LP 
Sbjct: 795 HLDLSTNEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPG 854

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +S L+ L EL V +NEL ++P  +   + + ++++ +N   +  LP+SIGNL  LE   
Sbjct: 855 EISLLTGLTELRVGYNELLTLPHEIGDISLIKQLHLEHN--KMVELPKSIGNLSALELFV 912

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
           +++N +  LP+    ++ L  L+V  NP +  P  +   G +    +    V KR AK+
Sbjct: 913 VTDNLLNDLPNEMVNMTSLSELKVDGNPFDNLPAAVRGAGGRDTYNF----VLKRAAKS 967



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 142/258 (55%), Gaps = 4/258 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P ++ ++ +L  L+L  N+I ++P  +G L+ LK L L+ N +  LP+ +G L SL  L
Sbjct: 531 VPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNENSLRTLPNELGQLTSLTML 590

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR N+++ LP  +  LV L +L L  N L  LP+ IG L+SL+ L V  N L +LP  +
Sbjct: 591 DLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKL 650

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++L+ L +  N L     +V K+  L+ L ++ N +  LP    +L+ L  LDVS N
Sbjct: 651 SMATNLKILDISTNHLTKF-RSVEKLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQN 709

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE  P ++     L  +++  N   L  L   IGN+  L  L +  N++  LP    ML
Sbjct: 710 KLEEFPVTITELPRLETLDLEAN--QLTVLAPEIGNMTSLRSLYLGRNKLIALPAELGML 767

Query: 348 SRLRVLRVQENPLE-VPP 364
           + LR L ++ N L+ +PP
Sbjct: 768 TGLRELHLKGNRLKAIPP 785



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           G    L+  DL    +  +P ++ ++ +L  L+L  N+I +LP  L +L +L+ L L  N
Sbjct: 513 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 572

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           +L +LP+ +G L SL  L +  N L ELP TI     L +L + YNRL+ LPE +G + +
Sbjct: 573 SLRTLPNELGQLTSLTMLDLRYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCLVS 632

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP--ESLCFATTLVKMNIGNNFAD 313
           LE+LSVR N + +LP  +S  ++L+ LD+S N L      E LC    L  +++  N   
Sbjct: 633 LEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLC---QLKDLDLKQN--K 687

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           L  LP   G L  L  LD+S N++   P +   L RL  L ++ N L V
Sbjct: 688 LTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTV 736



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 2/140 (1%)

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+   +    L A+P  V ++  L VL++  N I+ LP  +  L+ L+ L ++ N
Sbjct: 513 GSAGGLQSYDLRRKELTAVPSNVWEMKNLSVLNLYMNKIESLPPDLGKLTKLKALGLNEN 572

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P  L   T+L  +++   +  L  LP +I +L  L +L +  N++  LP+    L
Sbjct: 573 SLRTLPNELGQLTSLTMLDL--RYNKLTELPATIKHLVHLNKLFLRYNRLEQLPEEIGCL 630

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L +L V+ N L   PR +
Sbjct: 631 VSLEMLSVRNNQLHKLPRKL 650


>gi|384872582|sp|P70587.2|LRRC7_RAT RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 79  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 139 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 199 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 259 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 316

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 317 TIGYLHSLRTLAVDENFLPELPREI 341



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 365 GQMQRLRVLNLSDNRLK 381



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|291236280|ref|XP_002738068.1| PREDICTED: leucine rich repeat containing 40-like [Saccoglossus
            kowalevskii]
          Length = 1970

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 145/253 (57%), Gaps = 2/253 (0%)

Query: 115  LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
             S+L  L++S N +  +P  + GLSSL+ LD+  N+I E+P ++ +L SL  L+   N +
Sbjct: 781  FSNLSRLNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNL 840

Query: 175  SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
            + +PV L  L  L  LDL  N+LS LPD   +L  L++L ++ N+LE LP  + +   L+
Sbjct: 841  NVVPVELCTLTNLCYLDLSKNHLSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQ 900

Query: 235  ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
             L+   N +  +      +  LE+L + +N I ++P T   L +L ELD+S N++ ++P 
Sbjct: 901  LLQASQNCITEISNNTCILSELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPS 960

Query: 295  SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            S+     L K  I  N   L  LP+ IG+L++L++LDIS NQI ++P++  +L  L  L 
Sbjct: 961  SISQLQQLTKFAIRRN--QLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLE 1018

Query: 355  VQENPLEVPPRNI 367
            + +N L     NI
Sbjct: 1019 LGDNQLTSMTPNI 1031



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 166/327 (50%), Gaps = 32/327 (9%)

Query: 95   LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK----------- 143
            LN+ N ++     LP+ +  LSSL  LD+S+N+I  +P+T+  L SL             
Sbjct: 787  LNVSNNIL---TQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVV 843

Query: 144  ------------LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
                        LDL  N +  LPD   +L  L  L ++ N++  LP  + +L  L+ L 
Sbjct: 844  PVELCTLTNLCYLDLSKNHLSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQ 903

Query: 192  LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
               N ++ + ++   L  L+ L +  N + E+P T G+  +L EL +  N+++ +P ++ 
Sbjct: 904  ASQNCITEISNNTCILSELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSIS 963

Query: 252  KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            ++  L   ++R N + +LP  +  L  L++LD+S N++  VPE++     L K+ +G+N 
Sbjct: 964  QLQQLTKFAIRRNQLSELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDN- 1022

Query: 312  ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
              L ++  +IG L  LEEL   NN++  +P   + ++ LR + ++ N +E PP N  E  
Sbjct: 1023 -QLTSMTPNIGLLCKLEELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENY 1081

Query: 372  AQAVVQYMAD----LVEKRDAKTQPVK 394
             Q +  Y  +    ++E  D  T+ ++
Sbjct: 1082 FQLLSNYWDEQELRILEPFDVSTRTIR 1108



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 77/258 (29%), Positives = 138/258 (53%), Gaps = 2/258 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +DL+   I A+P  I   + +K +DLH N + ELPD   DL +L  L+L  N   ++P  
Sbjct: 14  IDLNGCNINALPEDIARYTRVKSIDLHDNALSELPDKFADLKTLQKLNLSFNDFRSMPTP 73

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +L  L +  N+L+ +P  + ++ +L +L +  N ++E+   I +  +L +  +  
Sbjct: 74  IIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKFNIKD 133

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N +  +P  +GK+  LE + +  N + Q+P ++  L  L + D+S N +  +P  +   T
Sbjct: 134 NMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLT 193

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L   NI NN   ++ +P +IG L+ML   DI++N++  LP   + +  L+ L +  N L
Sbjct: 194 QLQIFNISNN--QVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNL 251

Query: 361 EVPPRNIVEMGAQAVVQY 378
           +  PR+I E G   + QY
Sbjct: 252 KDIPRHIYEKGIVEIRQY 269



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/320 (28%), Positives = 160/320 (50%), Gaps = 44/320 (13%)

Query: 79   KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV-----------------S 120
            KL SL +E+S       +NL N L+ ++  +  ++ K+S+LV                  
Sbjct: 1136 KLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPKMSTLVLRNNNINEFPCSIVSLKE 1195

Query: 121  LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
            LD+S N I  +P  I  L  L +LD+ +N + ELPD++  + +LV L+L  NQI ++   
Sbjct: 1196 LDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTD 1255

Query: 181  LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
            +  L  L+  D+  N L+ +PD IG+L++L++L + +N ++ +P +I + ++L EL +  
Sbjct: 1256 IRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISN 1315

Query: 241  NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
            N +  +P+ +  +  L+ L++  N IK L  ++  +  L  LD+S N             
Sbjct: 1316 NIISCIPDGIYALTKLQRLNLMRNQIKDLSESVGKMVELVVLDISHN------------- 1362

Query: 301  TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRVLRVQENP 359
                        DL  +P SI NL+MLE LD+  N ++  LP     L+ L    ++   
Sbjct: 1363 ------------DLSIIPLSIKNLQMLEILDLQGNAKLTSLPIGIIRLTNLNQCGLEGTT 1410

Query: 360  LEVPPRNIVEMGAQAVVQYM 379
            +E PP N+   G  ++ +Y 
Sbjct: 1411 METPPMNVCLAGICSIREYF 1430



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 138/275 (50%), Gaps = 26/275 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P SI +L  L   +LS N I  V   IG L+ L  LD+H N++ ELP    +L SL  L
Sbjct: 408 VPKSISQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELPLDFWNLTSLNKL 467

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ +   +S+L  L ELDL  NNLS +P S   L  +  L +  N + ++P  I
Sbjct: 468 DLHENKLNEISERISQLQNLRELDLSRNNLSVVP-SGCFLPQIHSLDISDNAVIDIPSDI 526

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ +SL+ L +  NR+  +P  V  ++ L  L+++ N I +LP  +  L +L   DVS N
Sbjct: 527 GQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDN 586

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            ++ +P +                         +GNL  L +  ISNN++  LP +   L
Sbjct: 587 TIDEIPST-------------------------VGNLGKLTKFIISNNELDTLPRAMHKL 621

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
             L  L++  NP+  P  ++ + G  A+  Y  +L
Sbjct: 622 VNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEEL 656



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 147/261 (56%), Gaps = 5/261 (1%)

Query: 107  WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
            ++P  I + ++L+ LDL  N++ ++P  I  L+ L+K++L  N + ++PD I  L  +  
Sbjct: 1116 YVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPKMST 1175

Query: 167  LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
            L LR N I+  P +   +V L+ELD+ +NN+  +P  I +L  L +L V +N L ELP T
Sbjct: 1176 LVLRNNNINEFPCS---IVSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLRELPDT 1232

Query: 227  IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
            + + ++L +L +  N++ ++   +  +  L+V  +  N + ++P  + +L +L  L +S 
Sbjct: 1233 LYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLYLSS 1292

Query: 287  NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            N ++ +P S+   T L ++NI NN   +  +P  I  L  L+ L++  NQI+ L +S   
Sbjct: 1293 NTIQIIPSSIARLTNLSELNISNNI--ISCIPDGIYALTKLQRLNLMRNQIKDLSESVGK 1350

Query: 347  LSRLRVLRVQENPLEVPPRNI 367
            +  L VL +  N L + P +I
Sbjct: 1351 MVELVVLDISHNDLSIIPLSI 1371



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 146/272 (53%), Gaps = 11/272 (4%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L  + SLD+S+N ++ +P+ IG ++SL+ L+L  NRI E+P ++ DL  L +L+L+ N+I
Sbjct: 506 LPQIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLYQLSHLNLKKNKI 565

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
             LP+ + RL  L   D+  N +  +P ++G+L  L K I+  N+L+ LP  + +  +L 
Sbjct: 566 PKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDTLPRAMHKLVNLN 625

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM---SSLSSLRELDVSFNELES 291
           +L++  N +    E V K   L+ L   +  + ++   +      S+  E+ ++  ++  
Sbjct: 626 DLQIHGNPITEPTEDVCK-QGLDALHFYWEELDKIDRDLLKDFDRSTTDEITITQRDMTY 684

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P  +   T L K++   N   +   P  +  L  LEELD+S+N  + +P S   L +L+
Sbjct: 685 IPPMIDEYTDLKKLDFSAN--RIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLGKLK 742

Query: 352 VLRVQENPLEVPPRNI-----VEMGAQAVVQY 378
           +L +  N L + P NI     +++ A  + ++
Sbjct: 743 ILHLSNNKLTIFPTNIGNVKNLDLSANKITEF 774



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/277 (32%), Positives = 139/277 (50%), Gaps = 23/277 (8%)

Query: 115  LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
            LS L  LD+S N+I  +P T G L +L +LDL  N+I  +P SI  L  L    +R NQ+
Sbjct: 919  LSELEMLDISHNQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQL 978

Query: 175  SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
            S LP  +  L  L++LD+  N ++ +P++IG L  L KL +  N L  +   IG    L 
Sbjct: 979  SELPKCIGDLQLLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLE 1038

Query: 235  ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--------------SSLSSLR 280
            EL    N+L ++P  + +I TL  +S+R N I+  P                   L  L 
Sbjct: 1039 ELHARNNKLTSIPREIKRITTLRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRILE 1098

Query: 281  ELDVSFN-------ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
              DVS         +L  VP  +   T L+++++ NN   L +LP  I  L MLE++++S
Sbjct: 1099 PFDVSTRTIRLDGAQLTYVPLLIHRYTNLIELDLQNN--KLHSLPLEISRLNMLEKINLS 1156

Query: 334  NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NN +  +PD    L ++  L ++ N +   P +IV +
Sbjct: 1157 NNLLSDVPDIISTLPKMSTLVLRNNNINEFPCSIVSL 1193



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 143/283 (50%), Gaps = 28/283 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  +P  IG L+ L   ++S N++  +P TIG L  L + D+  NR+  LP  I  ++
Sbjct: 180 NHVSVIPGEIGCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMI 239

Query: 163 SLVYLDLRGNQISALP--------VALSRLVRLEELDL-------------GSNNLSSLP 201
            L  L L GN +  +P        V + +    EE++L             GS +L+ LP
Sbjct: 240 ELKELSLTGNNLKDIPRHIYEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLP 299

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
             IG   ++K L +  N L  LP  + +   L EL +  N  + +P  V KI  ++ L++
Sbjct: 300 SMIGQYTNVKALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKIQNIQKLNM 359

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N + Q P   + + +L++LD+S N +  +P+S  +   L K++I +N   L  +P+SI
Sbjct: 360 RNNMLTQFP---NDIDNLKQLDLSGNSISVIPDSCQYP--LAKLDISDN--KLTKVPKSI 412

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
             L  LEE ++SNN I  +      L++L +L +  N LE  P
Sbjct: 413 SQLHELEEFNLSNNAIYHVSPFIGELNQLLILDIHNNKLEELP 455



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 93/306 (30%), Positives = 148/306 (48%), Gaps = 50/306 (16%)

Query: 103  DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            + I  +PD+ GKL +L  LDLS N+I  +P++I  L  L K  +  N++ ELP  IGDL 
Sbjct: 930  NQITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQLSELPKCIGDLQ 989

Query: 163  SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
             L  LD+ GNQI+ +P  +  L  L +L+LG N L+S+  +IG L  L++L    N L  
Sbjct: 990  LLQQLDISGNQITMVPETIGVLKELTKLELGDNQLTSMTPNIGLLCKLEELHARNNKLTS 1049

Query: 223  LPHTIGQCSSLREL--------------------------------------------RV 238
            +P  I + ++LR +                                            R+
Sbjct: 1050 IPREIKRITTLRTISLRGNEIEDPPINECENYFQLLSNYWDEQELRILEPFDVSTRTIRL 1109

Query: 239  DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            D  +L  +P  + +   L  L ++ N +  LP  +S L+ L ++++S N L  VP+ +  
Sbjct: 1110 DGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIIST 1169

Query: 299  ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
               +  + + NN  ++   P SI +L+   ELDISNN I+++P     L +L  L V  N
Sbjct: 1170 LPKMSTLVLRNN--NINEFPCSIVSLK---ELDISNNNIQIIPTDIHTLYQLNRLDVSSN 1224

Query: 359  PL-EVP 363
             L E+P
Sbjct: 1225 SLRELP 1230



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/287 (26%), Positives = 146/287 (50%), Gaps = 23/287 (8%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++++  +P  +  +++L  L L +N+I  +   I  L +L K ++  N + E+P  IG L
Sbjct: 87  INDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKFNIKDNMVTEIPAEIGKL 146

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  +D+  NQ++ +P ++  LV L + D+  N++S +P  IG L  L+   +  N ++
Sbjct: 147 KHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEIGCLTQLQIFNISNNQVK 206

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-------- 273
           ++P TIG+   L    + +NRL +LP  +  +  L+ LS+  NN+K +P  +        
Sbjct: 207 DIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGNNLKDIPRHIYEKGIVEI 266

Query: 274 ------SSLSSLRELDVSFNELESVPESLCF-------ATTLVKMNIGNNFADLRALPRS 320
                   +  ++++DV   +++    SL +        T +  +NI NN   L +LP  
Sbjct: 267 RQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNVKALNISNN--SLMSLPME 324

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +  L+ LEEL++S+N  + +P     +  ++ L ++ N L   P +I
Sbjct: 325 LAKLQQLEELNLSDNHFQQIPVHVCKIQNIQKLNMRNNMLTQFPNDI 371



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 138/283 (48%), Gaps = 21/283 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I  L  L SL ++ N +  +P  +  +++L +L L  N+I E+   I  L +L+  
Sbjct: 70  MPTPIIHLQQLTSLSVNINDLAEIPTELYNITALTELSLFKNKIQEISPGISKLKNLIKF 129

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +++ N ++ +P  + +L  LEE+D+  N ++ +P S+  L+ L K  +  N +  +P  I
Sbjct: 130 NIKDNMVTEIPAEIGKLKHLEEIDISKNQVTQIPKSVDGLVHLAKFDISQNHVSVIPGEI 189

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L+   +  N++K +P  +G++  L    + +N +  LP  + S+  L+EL ++ N
Sbjct: 190 GCLTQLQIFNISNNQVKDIPPTIGRLQMLHRFDIAHNRLTSLPRDIKSMIELKELSLTGN 249

Query: 288 ELESVPESLCFATTLVKM--------------------NIGNNFADLRALPRSIGNLEML 327
            L+ +P  + +   +V++                    +I      L  LP  IG    +
Sbjct: 250 NLKDIPRHI-YEKGIVEIRQYWETEEVELMKDIDVLSEDIKLGSRSLTYLPSMIGQYTNV 308

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ISNN +  LP     L +L  L + +N  +  P ++ ++
Sbjct: 309 KALNISNNSLMSLPMELAKLQQLEELNLSDNHFQQIPVHVCKI 351



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 141/312 (45%), Gaps = 47/312 (15%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           IG+L+ L+ LD+  N++  +P     L+SL KLDLH N++ E+ + I  L +L  LDL  
Sbjct: 435 IGELNQLLILDIHNNKLEELPLDFWNLTSLNKLDLHENKLNEISERISQLQNLRELDLSR 494

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N +S +P     L ++  LD+  N +  +P  IG + SL+ L +  N + E+P T+    
Sbjct: 495 NNLSVVPSG-CFLPQIHSLDISDNAVIDIPSDIGQMTSLQNLNLSGNRITEIPSTVCDLY 553

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            L  L +  N++  LP  +G++H L    V  N I ++P+T+ +L  L +  +S NEL++
Sbjct: 554 QLSHLNLKKNKIPKLPLNIGRLHNLLSFDVSDNTIDEIPSTVGNLGKLTKFIISNNELDT 613

Query: 292 VPESLCFATTLVKMNIGNN----------------------------------------- 310
           +P ++     L  + I  N                                         
Sbjct: 614 LPRAMHKLVNLNDLQIHGNPITEPTEDVCKQGLDALHFYWEELDKIDRDLLKDFDRSTTD 673

Query: 311 -----FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
                  D+  +P  I     L++LD S N+I   P     L++L  L + +N  +  P 
Sbjct: 674 EITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPV 733

Query: 366 NIVEMGAQAVVQ 377
           +I ++G   ++ 
Sbjct: 734 SIFQLGKLKILH 745



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 130/231 (56%), Gaps = 5/231 (2%)

Query: 140  SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            S + + L   ++  +P  I    +L+ LDL+ N++ +LP+ +SRL  LE+++L +N LS 
Sbjct: 1103 STRTIRLDGAQLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSD 1162

Query: 200  LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
            +PD I +L  +  L++  N++ E P +I    SL+EL +  N ++ +P  +  ++ L  L
Sbjct: 1163 VPDIISTLPKMSTLVLRNNNINEFPCSI---VSLKELDISNNNIQIIPTDIHTLYQLNRL 1219

Query: 260  SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
             V  N++++LP T+  +++L +L++S N++ S+   +   T L   +I  N   L  +P 
Sbjct: 1220 DVSSNSLRELPDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISKN--KLTEIPD 1277

Query: 320  SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             IGNL  LE L +S+N I+++P S   L+ L  L +  N +   P  I  +
Sbjct: 1278 EIGNLVALERLYLSSNTIQIIPSSIARLTNLSELNISNNIISCIPDGIYAL 1328



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 139/310 (44%), Gaps = 45/310 (14%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++ ++P  I + + L  LD S NRI   P  +  L+ L++LDL  N   E+P SI  L  
Sbjct: 681 DMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQEIPVSIFQLGK 740

Query: 164 LVYLDLRGNQISALPVALSRLVRLE--------------------ELDLGSNNLSSLPDS 203
           L  L L  N+++  P  +  +  L+                     L++ +N L+ LP+ 
Sbjct: 741 LKILHLSNNKLTIFPTNIGNVKNLDLSANKITEFSCPFPNFSNLSRLNVSNNILTQLPED 800

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRE-----------------------LRVDY 240
           +  L SL+ L +  N ++E+P T+ +  SL                         L +  
Sbjct: 801 LTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVELCTLTNLCYLDLSK 860

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N L  LP+    +  L  L ++ N ++ LP  M  L  L+ L  S N +  +  + C  +
Sbjct: 861 NHLSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQASQNCITEISNNTCILS 920

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  ++I +N   +  +P + G L+ L ELD+S NQIR +P S   L +L    ++ N L
Sbjct: 921 ELEMLDISHN--QITEIPDTFGKLKTLNELDLSGNQIRTIPSSISQLQQLTKFAIRRNQL 978

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 979 SELPKCIGDL 988



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 130/235 (55%), Gaps = 5/235 (2%)

Query: 127  RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            ++  VP  I   ++L +LDL  N++  LP  I  L  L  ++L  N +S +P  +S L +
Sbjct: 1113 QLTYVPLLIHRYTNLIELDLQNNKLHSLPLEISRLNMLEKINLSNNLLSDVPDIISTLPK 1172

Query: 187  LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
            +  L L +NN++  P SI   +SLK+L +  N+++ +P  I     L  L V  N L+ L
Sbjct: 1173 MSTLVLRNNNINEFPCSI---VSLKELDISNNNIQIIPTDIHTLYQLNRLDVSSNSLREL 1229

Query: 247  PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
            P+ + K+ TL  L++  N I  + T + SL++L+  D+S N+L  +P+ +     L ++ 
Sbjct: 1230 PDTLYKVTTLVQLNLSDNQIVSISTDIRSLTNLKVFDISKNKLTEIPDEIGNLVALERLY 1289

Query: 307  IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            + +N   ++ +P SI  L  L EL+ISNN I  +PD    L++L+ L +  N ++
Sbjct: 1290 LSSN--TIQIIPSSIARLTNLSELNISNNIISCIPDGIYALTKLQRLNLMRNQIK 1342



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/243 (32%), Positives = 121/243 (49%), Gaps = 5/243 (2%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           S+   + +++  +  +P  I   + LKKLD  ANRI   P  +  L  L  LDL  N   
Sbjct: 670 STTDEITITQRDMTYIPPMIDEYTDLKKLDFSANRIATFPVELSQLNKLEELDLSDNIFQ 729

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            +PV++ +L +L+ L L +N L+  P +IG   ++K L +  N + E        S+L  
Sbjct: 730 EIPVSIFQLGKLKILHLSNNKLTIFPTNIG---NVKNLDLSANKITEFSCPFPNFSNLSR 786

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V  N L  LPE +  + +LE L +  N I ++P+T+S L SL  L+   N L  VP  
Sbjct: 787 LNVSNNILTQLPEDLTGLSSLEDLDISDNKIDEIPSTVSELHSLTNLNAHANNLNVVPVE 846

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           LC  T L  +++  N   L  LP    NL  L +L I  N++  LP     L  L++L+ 
Sbjct: 847 LCTLTNLCYLDLSKNH--LSCLPDDFCNLRQLRQLYIQENELECLPADMHKLDGLQLLQA 904

Query: 356 QEN 358
            +N
Sbjct: 905 SQN 907


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L +L  L L  N++  +P  I  L +L+ L L +NR+  LP  I  L +L
Sbjct: 60  LKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNL 119

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  NQ++ LP  + +L  L+ L L SN L++L   I  L +LK L +  N L  LP
Sbjct: 120 QVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLP 179

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I Q  +L+ L +  N+    P+ +G++  L+VL +  N I  LP  ++ L  L+ L +
Sbjct: 180 NEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYL 239

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N+L ++P+ +     L  +++   +   + +P+ IG LE L+ LD+ NNQ++ LP   
Sbjct: 240 SDNQLITLPKEIEQLKNLQTLDLS--YNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEI 297

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             L  L+ L +  N L + P+ I
Sbjct: 298 EQLKNLQTLFLSNNQLTILPQEI 320



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/300 (30%), Positives = 157/300 (52%), Gaps = 5/300 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 65  IEIGQLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 121

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 122 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 181

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 182 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 241

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+S+N+ + +P+ +     L  +++ NN   L+ LP+ I  
Sbjct: 242 NQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNN--QLKTLPKEIEQ 299

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P  I ++    V+ + ++ +
Sbjct: 300 LKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQI 359



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 129/230 (56%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L SL LSEN+    P  IG L +LK L L+ N+I  LP+ I  L  L YL
Sbjct: 178 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYL 237

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  + +L  L+ LDL  N    +P  IG L +L+ L +  N L+ LP  I
Sbjct: 238 YLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEI 297

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L+   N
Sbjct: 298 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSN 357

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           ++ ++ + +     L  + + NN   L  LP+ IG L+ L++L ++N+Q+
Sbjct: 358 QITTLSQEIGQLQNLKVLFLNNN--QLTTLPKEIGQLKNLKKLYLNNHQL 405



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 135/253 (53%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   I +L +L SLDLS N++  +P  I  L +LK L L  N+    P  IG L +L  L
Sbjct: 155 LSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVL 214

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQI+ LP  +++L +L+ L L  N L +LP  I  L +L+ L +  N  + +P  I
Sbjct: 215 FLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEI 274

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+LK LP+ + ++  L+ L +  N +  LP  +  L +L  L + +N
Sbjct: 275 GQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYN 334

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L  +N G+N   +  L + IG L+ L+ L ++NNQ+  LP     L
Sbjct: 335 QLTTLPNEIEQLKNLQVLNFGSN--QITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQL 392

Query: 348 SRLRVLRVQENPL 360
             L+ L +  + L
Sbjct: 393 KNLKKLYLNNHQL 405



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 107/189 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+ I KL  L  L LS+N+++ +P  I  L +L+ LDL  N+   +P  IG L 
Sbjct: 219 NQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIPKEIGQLE 278

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDLR NQ+  LP  + +L  L+ L L +N L+ LP  IG L +L  L +  N L  
Sbjct: 279 NLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTT 338

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ I Q  +L+ L    N++  L + +G++  L+VL +  N +  LP  +  L +L++L
Sbjct: 339 LPNEIEQLKNLQVLNFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLKKL 398

Query: 283 DVSFNELES 291
            ++ ++L S
Sbjct: 399 YLNNHQLSS 407



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 118/219 (53%), Gaps = 4/219 (1%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   ++  LP+ + +L  L+ L L  N L+ LP  I  L +L+ 
Sbjct: 39  DLTKALQNPLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQL 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L + +N L  LP  I Q  +L+ L +  N+L  LP+ + ++  L++L +  N +  L   
Sbjct: 99  LYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKD 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFADLRALPRSIGNLEMLEELD 331
           +  L +L+ LD+S N+L ++P  +     L  + +  N FA     P+ IG L+ L+ L 
Sbjct: 159 IEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA---TFPKEIGQLQNLKVLF 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++NNQI +LP+    L +L+ L + +N L   P+ I ++
Sbjct: 216 LNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQL 254



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 81/183 (44%), Gaps = 21/183 (11%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE    ++L   +     +R L +    LK LP  +G++  L+ L + YN +  LP  + 
Sbjct: 32  VEPGTYKDLTKALQNPLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIE 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD--------------------- 313
            L +L+ L +  N L ++P+ +     L  +++G+N                        
Sbjct: 92  QLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNR 151

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           L  L + I  L+ L+ LD+SNNQ+  LP+    L  L+ L + EN     P+ I ++   
Sbjct: 152 LTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 211

Query: 374 AVV 376
            V+
Sbjct: 212 KVL 214


>gi|301780908|ref|XP_002925871.1| PREDICTED: leucine-rich repeat-containing protein 7-like
           [Ailuropoda melanoleuca]
          Length = 1545

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 92  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 151

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 152 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 211

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 212 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 271

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 272 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 329

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 330 HSLRTLAVDENFLPELPREI 349



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 135 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 194

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 195 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 254

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 255 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 314

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 315 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 372

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 373 GQMQKLRVLNLSDNRLK 389



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 216 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 275

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 276 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 335

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 336 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 395

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 396 TKLKELAALWLSDNQ 410



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 179 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 238

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 239 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 298

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 299 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 358

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 359 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 414



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 56  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 115

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 116 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 175

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 176 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 233

Query: 367 IVEM 370
           I ++
Sbjct: 234 IGKL 237


>gi|50400980|sp|Q80TE7.2|LRRC7_MOUSE RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
          Length = 1490

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 79  NDLSSLPTSIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 139 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 199 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 259 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPP 316

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 317 TIGYLHSLRTLAVDENFLPELPREI 341



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + RLRVL + +N L+
Sbjct: 365 GQMQRLRVLNLSDNRLK 381



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQRLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQRLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|147903968|ref|NP_001088252.1| uncharacterized protein LOC495083 [Xenopus laevis]
 gi|54038577|gb|AAH84248.1| LOC495083 protein [Xenopus laevis]
          Length = 524

 Score =  139 bits (350), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 109/310 (35%), Positives = 159/310 (51%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LDLS N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +LV L+LR N ++ LP +L++L RLEELD+G+N 
Sbjct: 126 DLSSLICLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L  LP++IGSL  LK L ++ N L +LP  IG   +L  L +  N+L+ LPE +  + +L
Sbjct: 186 LYDLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V +N+I+ LP  +  L +L  L V  N L  + + +    +L ++ +  N   L  
Sbjct: 246 TDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVILTEN--QLLV 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LPRSIG L+ L  L+I  N++  LP+       L V  V+EN L   P  I    AQA  
Sbjct: 304 LPRSIGKLKKLCNLNIDRNKLMSLPNEIGGCCSLNVFCVRENRLSRLPSEI----AQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG LS+LVSL+L EN +  +P ++  L  L++LD+  N + +LP++IG L  L
Sbjct: 140 LQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLYKL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ LP  +  L  L  LDL  N L  LP+ I  L SL  L+V  N +E LP
Sbjct: 200 KDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+  +L  L+VD NRL  L + +G+  +L  + +  N +  LP ++  L  L  L++
Sbjct: 260 DGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVILTENQLLVLPRSIGKLKKLCNLNI 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P  +    +L    +  N   L  LP  I     L  LD++ N++  LP S 
Sbjct: 320 DRNKLMSLPNEIGGCCSLNVFCVREN--RLSRLPSEIAQATELHVLDVAGNRLTHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TSL-KLKALWLSDN 390



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 132/260 (50%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L  L  L LS+N I  +P  I     L +LDL  N I E+P+SI    +L   
Sbjct: 51  LPKQFFQLVQLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L  LP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPDLSSLICLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL V  N L  LPE +G ++ L+ L +  N +  LP  + +L +L  LD+S N
Sbjct: 171 AQLHRLEELDVGNNELYDLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE +PE +    +L  + + +N   +  LP  IG L+ L  L +  N++  L D     
Sbjct: 231 KLERLPEEISGLKSLTDLLVSHN--SIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGEC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  + + EN L V PR+I
Sbjct: 289 ESLTEVILTENQLLVLPRSI 308



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L SL  L +S N I  +P  IG L +L  L +  NR+++L D IG+  
Sbjct: 230 NKLERLPEEISGLKSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  + L  NQ+  LP ++ +L +L  L++  N L SLP+ IG   SL    V  N L  
Sbjct: 290 SLTEVILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPNEIGGCCSLNVFCVRENRLSR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           LP  I Q + L  L V  NRL  LP
Sbjct: 350 LPSEIAQATELHVLDVAGNRLTHLP 374



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+LM     L D IG+  SL  + L+EN+++ +P +IG L  L  L++  N+++ LP+ 
Sbjct: 275 QNRLMQ----LTDCIGECESLTEVILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPNE 330

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL    +R N++S LP  +++   L  LD+  N L+ LP S+ SL  LK L +  
Sbjct: 331 IGGCCSLNVFCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTSL-KLKALWLSD 389

Query: 218 N 218
           N
Sbjct: 390 N 390



 Score = 42.4 bits (98), Expect = 0.44,   Method: Compositional matrix adjust.
 Identities = 29/95 (30%), Positives = 48/95 (50%), Gaps = 2/95 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +P+       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPKQFFQLVQLRKLGLSDN--EIQRLPPEIANFMQLVELDLSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             +P+S      L+V     NPL   P +  ++ +
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPDLSS 129


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/269 (36%), Positives = 155/269 (57%), Gaps = 7/269 (2%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DL+  NKL+     LP  I +LS+L SL L  N++ ++P  +  LS+L+ LDL  N++  
Sbjct: 127 DLSYNNKLIG----LPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSS 182

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  I  L +L  LDL  N++S+LP  +++L  L+ LDL  N LSSLP  I  L +L+ L
Sbjct: 183 LPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNL 242

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  I Q S+L+ L +  N+L +L   + ++ +L+ L++ +N +  LP  +
Sbjct: 243 DLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVEI 302

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM-LEELDI 332
             L+SL+ L++S+N+L S+P  +   T L  +N+ NN   L  LP  IG+L + L+ L +
Sbjct: 303 GQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNN--QLNRLPTEIGHLHLHLKVLTL 360

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            NN ++ LP   R     R+L   +  LE
Sbjct: 361 DNNPLKFLPAEIRNRHSQRILNFYKQQLE 389



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 164/307 (53%), Gaps = 22/307 (7%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE------------- 125
           +L  +IE ++ +G  +L+L  K +     LP  IGKL+ L  L L +             
Sbjct: 5   ELLQVIEKAAAEGWEELDLSGKGLTT---LPPEIGKLTQLKKLILGKHKYDQGYIIDTIG 61

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N++  +P  IG L+ L++L +  N++  LP  I  L +L  L L  NQ+S+LP  ++RL 
Sbjct: 62  NKLSELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLS 121

Query: 186 RLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            L+ LDL  NN L  LP  I  L +L+ L +  N L  LP  + Q S+L+ L + YN+L 
Sbjct: 122 NLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLS 181

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
           +LP  + ++  L+ L + +N +  LP  ++ LS+L+ LD+SFN+L S+P  +   + L  
Sbjct: 182 SLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQN 241

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++   +  L  LP  I  L  L+ L++++NQ+  L      L+ L+ L +  N L   P
Sbjct: 242 LDL--RYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLP 299

Query: 365 RNIVEMG 371
              VE+G
Sbjct: 300 ---VEIG 303



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 125/219 (57%), Gaps = 4/219 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +LS+L +LDLS N++ ++PA I  LS+L+ LDL  N++  LP  I  L +L  L
Sbjct: 206 LPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSL 265

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+++L + + +L  L+ L+L  N LSSLP  IG L SL+ L +  N L  LP  I
Sbjct: 266 NLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEI 325

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIH-TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           GQ + L+ L +  N+L  LP  +G +H  L+VL++  N +K LP  + +  S R L+   
Sbjct: 326 GQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHSQRILNFYK 385

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
            +LE   + L  A  L+   IG   A   +L + I + E
Sbjct: 386 QQLEQTIDRLYEAKLLI---IGEGGAGKTSLAKKIEDEE 421


>gi|333999498|ref|YP_004532110.1| small GTP-binding protein [Treponema primitia ZAS-2]
 gi|333739539|gb|AEF85029.1| small GTP-binding protein [Treponema primitia ZAS-2]
          Length = 570

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/287 (35%), Positives = 160/287 (55%), Gaps = 11/287 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SI   +SL  +DL E  I+ +P  I  L+ L  LDL +  I  LP+SIG L  L+ L
Sbjct: 267 LPYSINDCTSLREIDLHECPIIELP-DISNLTQLTNLDLRSTEIKVLPESIGKLSQLITL 325

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL-IVETNDLEELPHT 226
           DL G++I  LP ++ RL  L  LDL  +++ +LP+SIG+L SLKKL +  T +L  LP T
Sbjct: 326 DLSGSKIEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASLKKLNLNNTRNLRILPET 385

Query: 227 IGQCSSLRELRV-------DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           IG  S+L+ L +       +   +  LPE +G++ +L+VL +  ++I  LP ++  LSSL
Sbjct: 386 IGDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLLLNDSDISSLPESIGELSSL 445

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + L ++   +  +P+S+    +L K+N+  N   +  LP SIGN++ L+ L + +  I  
Sbjct: 446 KILYLNDTPITELPQSMEKLCSLEKLNL--NGVKITELPLSIGNMKSLKILLLKDTDISS 503

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           LPDSF  LS L  L +    +   P  I ++   A  ++     E+ 
Sbjct: 504 LPDSFVYLSSLEKLDLSGTKITHFPECISKLSTLASFRFSNGAFEEE 550



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 134/224 (59%), Gaps = 8/224 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-LPDSIGDLLS 163
           IE LPDSIG+L++L +LDLS + I+A+P +IG L+SLKKL+L+  R +  LP++IGDL +
Sbjct: 332 IEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASLKKLNLNNTRNLRILPETIGDLSA 391

Query: 164 LVYLDLRG-------NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
           L  LD+           I+ LP  + RL  L+ L L  +++SSLP+SIG L SLK L + 
Sbjct: 392 LQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLLLNDSDISSLPESIGELSSLKILYLN 451

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
              + ELP ++ +  SL +L ++  ++  LP ++G + +L++L ++  +I  LP +   L
Sbjct: 452 DTPITELPQSMEKLCSLEKLNLNGVKITELPLSIGNMKSLKILLLKDTDISSLPDSFVYL 511

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           SSL +LD+S  ++   PE +   +TL      N   +   L R 
Sbjct: 512 SSLEKLDLSGTKITHFPECISKLSTLASFRFSNGAFEEEKLFRG 555



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 83/242 (34%), Positives = 142/242 (58%), Gaps = 10/242 (4%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+SIGKLS L++LDLS ++I  +P +IG L++L  LDL  + I+ LP+SIG+L SL
Sbjct: 309 IKVLPESIGKLSQLITLDLSGSKIEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASL 368

Query: 165 VYLDLRGNQ-ISALPVALSRLVRLEELDLGS-------NNLSSLPDSIGSLISLKKLIVE 216
             L+L   + +  LP  +  L  L+ LD+GS         ++ LP++IG L SLK L++ 
Sbjct: 369 KKLNLNNTRNLRILPETIGDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLLLN 428

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            +D+  LP +IG+ SSL+ L ++   +  LP+++ K+ +LE L++    I +LP ++ ++
Sbjct: 429 DSDISSLPESIGELSSLKILYLNDTPITELPQSMEKLCSLEKLNLNGVKITELPLSIGNM 488

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
            SL+ L +   ++ S+P+S  + ++L K+++      +   P  I  L  L     SN  
Sbjct: 489 KSLKILLLKDTDISSLPDSFVYLSSLEKLDLSG--TKITHFPECISKLSTLASFRFSNGA 546

Query: 337 IR 338
             
Sbjct: 547 FE 548



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 104/180 (57%), Gaps = 11/180 (6%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDL-------SENRIVAVPATIGGLSSLKKLD 145
           + LNL N    N+  LP++IG LS+L  LD+       +E  I  +P TIG L SLK L 
Sbjct: 369 KKLNLNN--TRNLRILPETIGDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLL 426

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L+ + I  LP+SIG+L SL  L L    I+ LP ++ +L  LE+L+L    ++ LP SIG
Sbjct: 427 LNDSDISSLPESIGELSSLKILYLNDTPITELPQSMEKLCSLEKLNLNGVKITELPLSIG 486

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           ++ SLK L+++  D+  LP +    SSL +L +   ++   PE + K+ TL   S R++N
Sbjct: 487 NMKSLKILLLKDTDISSLPDSFVYLSSLEKLDLSGTKITHFPECISKLSTLA--SFRFSN 544



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 99/372 (26%), Positives = 162/372 (43%), Gaps = 97/372 (26%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENR------------------------------------- 127
           I+ +P+  GKLSSL   DL+                                        
Sbjct: 83  IKKMPEWTGKLSSLNFYDLTNESLASLFESFDDLWFTTTSITELTLHGEGLTVFPDRLKI 142

Query: 128 -------------IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
                        I  +P  I  L  L+KL +    I  LP+ + +   L  LDL   +I
Sbjct: 143 LNKLKIVYLWNTGITQIPVWIQSLKLLEKLSIGVAEIRTLPEWLANFPCLKELDLYNLKI 202

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL-IVE---------------TN 218
           + +P  +  L +LE L +    +S LP SIG L  LKKL I++                N
Sbjct: 203 TKIPEWIGNLNKLETLSINLCPISDLPVSIGKLGMLKKLRIIQPCIGRYSSEESLAAFRN 262

Query: 219 DLEELPHTIGQCSSLRE----------------------LRVDYNRLKALPEAVGKIHTL 256
               LP++I  C+SLRE                      L +    +K LPE++GK+  L
Sbjct: 263 FTVSLPYSINDCTSLREIDLHECPIIELPDISNLTQLTNLDLRSTEIKVLPESIGKLSQL 322

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  + I+ LP ++  L++L  LD+S++ + ++PES+    +L K+N+ NN  +LR 
Sbjct: 323 ITLDLSGSKIEVLPDSIGRLTNLTNLDLSYSSIMALPESIGNLASLKKLNL-NNTRNLRI 381

Query: 317 LPRSIGNLEMLEELDISN-------NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           LP +IG+L  L+ LDI +         I +LP++   L  L+VL + ++ +   P +I E
Sbjct: 382 LPETIGDLSALQVLDIGSFFSLHNEKTITILPETIGRLRSLKVLLLNDSDISSLPESIGE 441

Query: 370 MGAQAVVQYMAD 381
           + +  ++ Y+ D
Sbjct: 442 LSSLKIL-YLND 452



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 23/285 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI  +PD I  L +L S+ +    I  +P   G LSSL   DL    +  L +S  DL 
Sbjct: 58  ENITIIPDCIKNLPALNSMTIRSTGIKKMPEWTGKLSSLNFYDLTNESLASLFESFDDLW 117

Query: 163 ----SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
               S+  L L G  ++  P  L  L +L+ + L +  ++ +P  I SL  L+KL +   
Sbjct: 118 FTTTSITELTLHGEGLTVFPDRLKILNKLKIVYLWNTGITQIPVWIQSLKLLEKLSIGVA 177

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           ++  LP  +     L+EL +   ++  +PE +G ++ LE LS+    I  LP ++  L  
Sbjct: 178 EIRTLPEWLANFPCLKELDLYNLKITKIPEWIGNLNKLETLSINLCPISDLPVSIGKLGM 237

Query: 279 LRELDV---------------SF-NELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           L++L +               +F N   S+P S+   T+L ++++      +  LP  I 
Sbjct: 238 LKKLRIIQPCIGRYSSEESLAAFRNFTVSLPYSINDCTSLREIDLHE--CPIIELP-DIS 294

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           NL  L  LD+ + +I+VLP+S   LS+L  L +  + +EV P +I
Sbjct: 295 NLTQLTNLDLRSTEIKVLPESIGKLSQLITLDLSGSKIEVLPDSI 339



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/119 (39%), Positives = 69/119 (57%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           +I  LP+SIG+LSSL  L L++  I  +P ++  L SL+KL+L+  +I ELP SIG++ S
Sbjct: 431 DISSLPESIGELSSLKILYLNDTPITELPQSMEKLCSLEKLNLNGVKITELPLSIGNMKS 490

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           L  L L+   IS+LP +   L  LE+LDL    ++  P+ I  L +L          EE
Sbjct: 491 LKILLLKDTDISSLPDSFVYLSSLEKLDLSGTKITHFPECISKLSTLASFRFSNGAFEE 549



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/193 (22%), Positives = 94/193 (48%), Gaps = 6/193 (3%)

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
            L +   ++L   N++ +PD I +L +L  + + +  ++++P   G+ SSL    +    
Sbjct: 46  ELAQFTHIELCGENITIIPDCIKNLPALNSMTIRSTGIKKMPEWTGKLSSLNFYDLTNES 105

Query: 243 LKALPEAVGKIH----TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           L +L E+   +     ++  L++    +   P  +  L+ L+ + +    +  +P  +  
Sbjct: 106 LASLFESFDDLWFTTTSITELTLHGEGLTVFPDRLKILNKLKIVYLWNTGITQIPVWIQS 165

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L K++IG   A++R LP  + N   L+ELD+ N +I  +P+    L++L  L +   
Sbjct: 166 LKLLEKLSIG--VAEIRTLPEWLANFPCLKELDLYNLKITKIPEWIGNLNKLETLSINLC 223

Query: 359 PLEVPPRNIVEMG 371
           P+   P +I ++G
Sbjct: 224 PISDLPVSIGKLG 236


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 48  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 107

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 108 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 167

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 168 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 227

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 228 NLQELYLRNN--RLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRL 285

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 286 TVLPKEIGQL 295



 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/262 (33%), Positives = 144/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 58  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 118 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 177

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 178 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 237

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 238 RLTVLPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 295

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 296 QNLQDLELLMNPLSLKERKRIQ 317



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 163/307 (53%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 52  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 104

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 105 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 164

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 165 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 224

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 225 QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNN- 283

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 284 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 342

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 343 QEEPLKV 349



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L  L   ENR+ A+P  +G 
Sbjct: 215 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQMLCSPENRLTALPKEMGQ 271

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 272 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 331

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 332 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 391

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 392 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 451

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 452 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 509

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 510 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 560



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/303 (30%), Positives = 141/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 265 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 324

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 325 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 384

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 385 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 444

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 445 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 504

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 505 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 562

Query: 356 QEN 358
           Q N
Sbjct: 563 QNN 565



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 386 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 445

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 446 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 505

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 506 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 565

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 566 QFSFEEQERI 575



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 364 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 423

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 424 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 483

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 484 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 542

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 543 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 578



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 34  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 93

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 94  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 153

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 154 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 211

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 212 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 249



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 403 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 462

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 463 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 522

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 523 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 567



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 27  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 86

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 87  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 144

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 145 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 180



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 481 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 537

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 538 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 568


>gi|428182313|gb|EKX51174.1| hypothetical protein GUITHDRAFT_66212 [Guillardia theta CCMP2712]
          Length = 556

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/348 (31%), Positives = 165/348 (47%), Gaps = 70/348 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG L+ L SLDLS N I ++P  IG L+S+K+LDL  N +  LP  +  L 
Sbjct: 22  NRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSLPKEMSSLP 81

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELD-----------------------LGSNNLSS 199
               L L  N++S LP ++SRL  L   D                       LG N +SS
Sbjct: 82  DWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLENSSIRVVLLGHNQISS 141

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE-- 257
           LP S+ +  SL +L ++ N +  LP +IG C++L  L + +NRL+ LP  +G++  L   
Sbjct: 142 LPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRHNRLRRLPPEMGRMRALNKL 201

Query: 258 -VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD--- 313
            +L   +N+IK LPT +  L+ LR L V  N LE +P  L F T+L ++   +N  +   
Sbjct: 202 LLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLPPGLRFLTSLTELLANDNMLEEVC 261

Query: 314 ------------------LRALPRSIGNLEMLEELDISNNQIRV---------------- 339
                             L  LP +IGN  +L +L I  N+I++                
Sbjct: 262 PEIGACVHLTRLNLHANKLVTLPHTIGNCSLLTQLTIHQNKIKLPEEIGHFTLLDELFSI 321

Query: 340 -------LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
                  +P+S   L RLR LR+  N L + P ++ E+    V+  +A
Sbjct: 322 CDNELVEIPESVGNLVRLRSLRLSGNNLTMLPDSLSELFTDLVLLSVA 369



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 95/273 (34%), Positives = 149/273 (54%), Gaps = 4/273 (1%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL-DLR 170
           IG    L  L+L  N++V +P TIG  S L +L +H N+I +LP+ IG    L  L  + 
Sbjct: 264 IGACVHLTRLNLHANKLVTLPHTIGNCSLLTQLTIHQNKI-KLPEEIGHFTLLDELFSIC 322

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS-LKKLIVETNDLEELPHTIGQ 229
            N++  +P ++  LVRL  L L  NNL+ LPDS+  L + L  L V  N +E L   I  
Sbjct: 323 DNELVEIPESVGNLVRLRSLRLSGNNLTMLPDSLSELFTDLVLLSVAHNKVESLTDRISV 382

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            S+L  L ++ N L+ LP+++    +L  L++  N  +  P  +  LS L+ L+++ N++
Sbjct: 383 LSNLTVLELEDNLLQHLPQSLEGNRSLVKLTLNRNQFQSFPEVIFDLSGLQILNLALNQI 442

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           E VPE+LC A T +K+ +      + ALP +IG +  L  LD++ N I  LP S     R
Sbjct: 443 ELVPEALCEANTALKL-LALQHNQIHALPSNIGLMANLILLDLTQNHIISLPSSISACQR 501

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           LR L +  NPL   PR+++ +     V +++ L
Sbjct: 502 LRALFLSGNPLPSFPRDVLLLSRLQQVLFLSSL 534



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 75/234 (32%), Positives = 120/234 (51%), Gaps = 31/234 (13%)

Query: 160 DLLSLVY---LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
           D+LS+ +   L L  N++S LP  +  L +L+ LDL  N ++SLP  IG L S+K+L + 
Sbjct: 7   DILSISWITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLS 66

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT------------------LEV 258
            N L+ LP  +       +L + +NRL  LP ++ ++ +                  LE 
Sbjct: 67  FNMLDSLPKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSDFGLQAVPPDLLEN 126

Query: 259 LSVR-----YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
            S+R     +N I  LP ++ + +SL EL +  N +  +P S+ F T L  +++ +N   
Sbjct: 127 SSIRVVLLGHNQISSLPPSVQTWTSLVELCLQGNRINRLPASIGFCTALTSLDLRHN--R 184

Query: 314 LRALPRSIGNLEMLEELDI---SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           LR LP  +G +  L +L +    +N I+ LP     L+RLR LRV  N LE+ P
Sbjct: 185 LRRLPPEMGRMRALNKLLLLGQHHNSIKDLPTDLDRLTRLRSLRVDHNILEMLP 238



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 26/249 (10%)

Query: 83  LIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSL-DLSENRIVAVPATIGGLSSL 141
           L+ +    G   L  Q  +  N   LP+ IG  + L  L  + +N +V +P ++G L  L
Sbjct: 280 LVTLPHTIGNCSLLTQLTIHQNKIKLPEEIGHFTLLDELFSICDNELVEIPESVGNLVRL 339

Query: 142 KKLDLHANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           + L L  N +  LPDS+ +L + LV L +  N++ +L   +S L  L  L+L  N L  L
Sbjct: 340 RSLRLSGNNLTMLPDSLSELFTDLVLLSVAHNKVESLTDRISVLSNLTVLELEDNLLQHL 399

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCS------------------------SLREL 236
           P S+    SL KL +  N  +  P  I   S                        +L+ L
Sbjct: 400 PQSLEGNRSLVKLTLNRNQFQSFPEVIFDLSGLQILNLALNQIELVPEALCEANTALKLL 459

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            + +N++ ALP  +G +  L +L +  N+I  LP+++S+   LR L +S N L S P  +
Sbjct: 460 ALQHNQIHALPSNIGLMANLILLDLTQNHIISLPSSISACQRLRALFLSGNPLPSFPRDV 519

Query: 297 CFATTLVKM 305
              + L ++
Sbjct: 520 LLLSRLQQV 528



 Score = 58.5 bits (140), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 42/158 (26%), Positives = 83/158 (52%), Gaps = 2/158 (1%)

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           + +L +  N +  LP  IG  + L+ L + +N + +LP  +G++ +++ L + +N +  L
Sbjct: 14  ITRLSLSYNRVSTLPAGIGSLTQLQSLDLSHNLITSLPPQIGQLTSMKQLDLSFNMLDSL 73

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  MSSL    +L +S N L ++P S+   ++L   ++ +    L+A+P  +     +  
Sbjct: 74  PKEMSSLPDWSKLLLSHNRLSTLPPSISRLSSLTHADLSD--FGLQAVPPDLLENSSIRV 131

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + + +NQI  LP S +  + L  L +Q N +   P +I
Sbjct: 132 VLLGHNQISSLPPSVQTWTSLVELCLQGNRINRLPASI 169


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 141/253 (55%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+   N++   P  IG L  L++L+L  NR+  L + +  L +L  L
Sbjct: 178 LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQIL 237

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N ++ LP  + +L +L+EL+L    L +LP  I  L +L+ L +    L  LP  I
Sbjct: 238 DLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 297

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L++L +  N+L  LPE +G++  L+ L +  N ++ LP  +  L  L+ L +  N
Sbjct: 298 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 357

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L ++N+G  F  L  LP+ IG L+ L+EL++  NQ+  LP     L
Sbjct: 358 QITTFPKEIGQLQNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQL 415

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 416 QKLRKLNLYNNPI 428



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 28/334 (8%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSL-----------------------PDSIGSLISLKKLIVE 216
            + +L  L+ L+L  N L+ L                       P+ IG L +L+ L  +
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQ 194

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N L   P  IGQ   L+EL + +NRL  L E V ++  L++L +  N +  LP  +  L
Sbjct: 195 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQL 254

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             L+EL++   +L+++P+ +     L  +N+  N+  L  LP+ IG L  L++L +  NQ
Sbjct: 255 QKLQELNLYGIQLKTLPQGIIQLQNLRGLNL--NYTHLTILPKEIGQLSKLQKLYLYGNQ 312

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  LP+    L +L+ L +  NPL   P+ I ++
Sbjct: 313 LTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQL 346



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 139/261 (53%), Gaps = 7/261 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +   P  IG+L  L  L+L  NR+  +   +  L +L+ LDL +N + 
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L+L G Q+  LP  + +L  L  L+L   +L+ LP  IG L  L+K
Sbjct: 246 TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQK 305

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ   L+EL +  N L+ LP+ + ++  L+ L +  N I   P  
Sbjct: 306 LYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKE 365

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL++ FN+L ++P+ +     L ++N+   F  L  LP+ +G L+ L +L++
Sbjct: 366 IGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNL--EFNQLATLPKEVGQLQKLRKLNL 423

Query: 333 SNNQIRVLPDSFRMLSRLRVL 353
            NN     P +   + R+R L
Sbjct: 424 YNN-----PIASEKIERIRKL 439



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +G+L +L  L+L  N++  +P  IG L +L+ L+L+ N++  LP+ IG L +L  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           + +GNQ++  P  + +L +L+EL+LG N L++L + +  L +L+ L + +N L  LP  I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L+EL +   +LK LP+ + ++  L  L++ Y ++  LP  +  LS L++L +  N
Sbjct: 252 GQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P     L
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQL 369

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 370 QNLQELNLGFNQLTTLPQEIGQL 392


>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
          Length = 425

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 97/273 (35%), Positives = 150/273 (54%), Gaps = 10/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LP  IG L +L +L L  N +  +P+ I  L SL+KL L  N    LP  IG+L 
Sbjct: 130 NNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELK 189

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GN++ AL   + +LV L++L+L  N    LP  IG L +L  L   +N L  
Sbjct: 190 NLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTT 249

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +  +L+ L +DYN+L+ LP  +G++  L+ L    N +K LP+ +  L +L+ L
Sbjct: 250 LPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHFNCNKLKSLPSEIGELKNLQYL 309

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N+L+ +P  +        + +  N  +L  LP  IG LE L ELD+S N +  LP+
Sbjct: 310 DLRNNKLKILPSEI--GKLKNLLYLVLNNNELTTLPSEIGELENLGELDLSGNNLETLPN 367

Query: 343 SFRMLS-RLRVLRVQENPLEVPPRNIVEMGAQA 374
           + R LS  L++L ++ N       NI E+G + 
Sbjct: 368 TIRKLSGSLQLLYLRGN-------NISEIGEKG 393



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 122/214 (57%), Gaps = 2/214 (0%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           I ++ + I  L  LKKL L  N +  LP  IGDL++L  L L  N +  LP  + RLV L
Sbjct: 109 ITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSL 168

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
            +L L  NN  +LP  IG L +L++L +  N L+ L   IG+  +L++L ++ N  + LP
Sbjct: 169 RKLYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLP 228

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
             +GK+  L VL  R N +  LP  +  L +L+ L + +N+LE++P  +     L  ++ 
Sbjct: 229 AEIGKLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHF 288

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
             N   L++LP  IG L+ L+ LD+ NN++++LP
Sbjct: 289 --NCNKLKSLPSEIGELKNLQYLDLRNNKLKILP 320



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/194 (33%), Positives = 101/194 (52%), Gaps = 27/194 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N++  +P+ IG L +L+ L  + N++  LP  IG+L +L YL
Sbjct: 250 LPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHFNCNKLKSLPSEIGELKNLQYL 309

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR N++  LP  + +L  L  L L +N L++LP  IG L +L +L +  N+LE LP+TI
Sbjct: 310 DLRNNKLKILPSEIGKLKNLLYLVLNNNELTTLPSEIGELENLGELDLSGNNLETLPNTI 369

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S                       +L++L +R NNI ++     +L   +EL   F 
Sbjct: 370 RKLSG----------------------SLQLLYLRGNNISEIGEKGRTLGK-KELRGIFG 406

Query: 288 EL----ESVPESLC 297
           +     E VP+ LC
Sbjct: 407 DCVKLDEDVPQGLC 420



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 78/162 (48%), Gaps = 25/162 (15%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L++L +  N LK+LP  +G +  L+ L +  NN+K LP+ +  L SLR+L +S       
Sbjct: 122 LKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLS------- 174

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                           NNF   + LP  IG L+ L+EL +S N+++ L      L  L+ 
Sbjct: 175 ---------------DNNF---KTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQD 216

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVK 394
           L +  N  E+ P  I ++    V+ + ++ +    A+ + +K
Sbjct: 217 LNLNGNEFELLPAEIGKLENLNVLYFRSNKLTTLPAEIRELK 258


>gi|307205957|gb|EFN84083.1| Protein LAP2 [Harpegnathos saltator]
          Length = 1018

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 141/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    SL+ +D+  N     PD+I 
Sbjct: 71  LSDNEVSTLPPAIASLINLEYLDLSKNSIKELPDSIKECKSLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L+ L+L  NN+ +LP S+  L++L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  LP  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             +++S NE+  +P++LC+  T+V + I +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMNLSSNEMYELPDTLCYLRTVVTLKIDDN--QLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L    N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNADNNYLRALPAEI 336



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 154/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALKTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P  + +L RL   D   N + +LP  I     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ ELP T+    ++  L++D N+L ALP  +G++ +LE L V  N ++ LP
Sbjct: 251 SIMNLSSNEMYELPDTLCYLRTVVTLKIDDNQLNALPNDIGQMSSLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+   N L ++P  +   T L  +++ +N  +L  +P  +G+L  L  L
Sbjct: 311 SSIGLLRKLHCLNADNNYLRALPAEIGSCTALSLLSLRSN--NLTRVPPELGHLSSLRVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 143/279 (51%), Gaps = 25/279 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  SL S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKSLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRLV L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALKTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRE-----------------------LRVDYNRLKALPEAVGKIHTLEVL 259
           +P  I Q   L                         + +  N +  LP+ +  + T+  L
Sbjct: 217 IPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDISIMNLSSNEMYELPDTLCYLRTVVTL 276

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP  +  +SSL EL V+ N LE +P S+     L  +N  NN+  LRALP 
Sbjct: 277 KIDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNADNNY--LRALPA 334

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            IG+   L  L + +N +  +P     LS LRVL +  N
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNN 373



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 119/225 (52%), Gaps = 3/225 (1%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N++S LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVSTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    SL+ + +  N  E  P  I     LREL ++   ++ LP   G++  L+ L
Sbjct: 102 LPDSIKECKSLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALKTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRIPG 219

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           +I  L  L   D + N I  LP   R    + ++ +  N + E+P
Sbjct: 220 NIEQLYRLNHFDCTMNAIHTLPMEIRGWRDISIMNLSSNEMYELP 264



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 106/186 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P  I G   +  ++L +N + ELPD++  L 
Sbjct: 212 NDIRRIPGNIEQLYRLNHFDCTMNAIHTLPMEIRGWRDISIMNLSSNEMYELPDTLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L  + N L  
Sbjct: 272 TVVTLKIDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNADNNYLRA 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  +G + +L VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPAEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 75.1 bits (183), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 91/157 (57%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           +G RD+++ N   + +  LPD++  L ++V+L + +N++ A+P  IG +SSL++L +  N
Sbjct: 245 RGWRDISIMNLSSNEMYELPDTLCYLRTVVTLKIDDNQLNALPNDIGQMSSLEELIVTKN 304

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            +  LP SIG L  L  L+   N + ALP  +     L  L L SNNL+ +P  +G L S
Sbjct: 305 FLEYLPSSIGLLRKLHCLNADNNYLRALPAEIGSCTALSLLSLRSNNLTRVPPELGHLSS 364

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L+ L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 365 LRVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +L +L +D NR+K LP  + + H L VLS+  N +  LP  ++SL +L  LD+S N +  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVSTLPPAIASLINLEYLDLSKNSI-- 99

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
                                  + LP SI   + L  +DIS N     PD+   +  LR
Sbjct: 100 -----------------------KELPDSIKECKSLRSIDISVNPFERFPDAITHIVGLR 136

Query: 352 VLRVQENPLEVPPRNIVEMGA 372
            L + +  +E  P N   + A
Sbjct: 137 ELYINDAYIEYLPANFGRLSA 157


>gi|410967519|ref|XP_003990266.1| PREDICTED: leucine-rich repeat-containing protein 7 [Felis catus]
          Length = 1537

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 141/253 (55%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ IG+L +L  L+   N++   P  IG L  L++L+L  NR+  L + +  L +L  L
Sbjct: 178 LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQIL 237

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N ++ LP  + +L +L+EL+L    L +LP  I  L +L+ L +    L  LP  I
Sbjct: 238 DLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEI 297

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ S L++L +  N+L  LPE +G++  L+ L +  N ++ LP  +  L  L+ L +  N
Sbjct: 298 GQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 357

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ + P+ +     L ++N+G  F  L  LP+ IG L+ L+EL++  NQ+  LP     L
Sbjct: 358 QITTFPKEIGQLKNLQELNLG--FNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQL 415

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 416 QKLRKLNLYNNPI 428



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/334 (29%), Positives = 166/334 (49%), Gaps = 28/334 (8%)

Query: 60  IMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLV 119
           ++++C  C  Q   K +         + + K  R LNL       +  L   IGKL +L 
Sbjct: 18  LILICFSCKLQAQSKETQTYRNLTEALQNPKDARILNLSG---SKLATLSKEIGKLQNLQ 74

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
            L L+ N++  +P  IG L +L+ LDL++N +  LP  IG L +L  L+L  N+++ LP 
Sbjct: 75  KLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPD 134

Query: 180 ALSRLVRLEELDLGSNNLSSL-----------------------PDSIGSLISLKKLIVE 216
            + +L  L+ L+L  N L+ L                       P+ IG L +L+ L  +
Sbjct: 135 EVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQILNSQ 194

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N L   P  IGQ   L+EL + +NRL  L E V ++  L++L +  N +  LP  +  L
Sbjct: 195 GNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQL 254

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             L+EL++   +L+++P+ +     L  +N+  N+  L  LP+ IG L  L++L +  NQ
Sbjct: 255 QKLQELNLYGIQLKTLPQGIIQLQNLRGLNL--NYTHLTILPKEIGQLSKLQKLYLYGNQ 312

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +  LP+    L +L+ L +  NPL   P+ I ++
Sbjct: 313 LTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQL 346



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 139/261 (53%), Gaps = 7/261 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L + N   + +   P  IG+L  L  L+L  NR+  +   +  L +L+ LDL +N + 
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L  L+L G Q+  LP  + +L  L  L+L   +L+ LP  IG L  L+K
Sbjct: 246 TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQK 305

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  IGQ   L+EL +  N L+ LP+ + ++  L+ L +  N I   P  
Sbjct: 306 LYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKE 365

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+EL++ FN+L ++P+ +     L ++N+   F  L  LP+ +G L+ L +L++
Sbjct: 366 IGQLKNLQELNLGFNQLTTLPQEIGQLQNLQELNL--EFNQLATLPKEVGQLQKLRKLNL 423

Query: 333 SNNQIRVLPDSFRMLSRLRVL 353
            NN     P +   + R+R L
Sbjct: 424 YNN-----PIASEKIERIRKL 439



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 153/263 (58%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +G+L +L  L+L  N++  +P  IG L +L+ L+L+ N++  LP+ IG L +L  L
Sbjct: 132 LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEKIGQLQNLQIL 191

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           + +GNQ++  P  + +L +L+EL+LG N L++L + +  L +L+ L + +N L  LP  I
Sbjct: 192 NSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEI 251

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ   L+EL +   +LK LP+ + ++  L  L++ Y ++  LP  +  LS L++L +  N
Sbjct: 252 GQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGN 311

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++PE +     L ++ +GNN   LR LP+ I  L+ L+ L +  NQI   P     L
Sbjct: 312 QLTTLPEEIGQLKKLQELYLGNN--PLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQL 369

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 370 KNLQELNLGFNQLTTLPQEIGQL 392


>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 348

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 139/253 (54%), Gaps = 2/253 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++  P +I KL +L  L+L  N+I ++P  IG L +LK+LDL+ N++  LP  IG+L +
Sbjct: 52  NLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKN 111

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L GNQIS LP   S    L+ L L  N     PD I  L +L+ L    N L+EL
Sbjct: 112 LEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 171

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +GQ  +L  L +  N LK LP +  +  +L+ L++ YN  +  P  + SL  L  L+
Sbjct: 172 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLE 231

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           ++ N+   +PE +   + L  + +  N   L+ LP++IG L+ LE L +  NQ+  LP+ 
Sbjct: 232 LTGNQFTFLPEEIGNLSNLNSLFLEAN--RLKQLPQNIGKLQNLESLYLQENQLTTLPEE 289

Query: 344 FRMLSRLRVLRVQ 356
              L  L+ L +Q
Sbjct: 290 IGSLQNLKELYLQ 302



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 4/259 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + I KL +L  L  +   +   P TI  L +LK+L+L  N+I  LP+ IG+L +L  LDL
Sbjct: 35  EEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDL 94

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ+++LPV +  L  LE L L  N +S LP       +LK L +  N   + P  I Q
Sbjct: 95  NNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQ 154

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L  L    N+LK LPE +G++  L +L +  N +K LP++ S   SL+ L++++N  
Sbjct: 155 LQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRF 214

Query: 290 ESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           +  P+ L     L  + + GN F     LP  IGNL  L  L +  N+++ LP +   L 
Sbjct: 215 QVFPKELISLKKLETLELTGNQFT---FLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQ 271

Query: 349 RLRVLRVQENPLEVPPRNI 367
            L  L +QEN L   P  I
Sbjct: 272 NLESLYLQENQLTTLPEEI 290



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 88/159 (55%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            PD I +L +L  LD SEN++  +P  +G L +L  L L  N +  LP S  +  SL  L
Sbjct: 148 FPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSL 207

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+    P  L  L +LE L+L  N  + LP+ IG+L +L  L +E N L++LP  I
Sbjct: 208 NLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNI 267

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           G+  +L  L +  N+L  LPE +G +  L+ L ++ +N 
Sbjct: 268 GKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQGSNF 306



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 99/188 (52%), Gaps = 2/188 (1%)

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  LE L     NL + P +I  L +LK+L +  N +  LP  IG+  +L+EL ++ N+
Sbjct: 39  KLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQ 98

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L +LP  +G +  LE+L++  N I  LP   S   +L+ L +S N+    P+ +     L
Sbjct: 99  LTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNL 158

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             ++   N   L+ LP  +G L+ L  L +  N+++VLP SF     L+ L +  N  +V
Sbjct: 159 EWLDFSEN--QLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQV 216

Query: 363 PPRNIVEM 370
            P+ ++ +
Sbjct: 217 FPKELISL 224



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 10/206 (4%)

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           +YLDL+    SAL      LVR  EL L S +L S  + I  L +L++LI    +L+  P
Sbjct: 6   IYLDLK----SALKNP--NLVR--ELALDSFDLKSFTEEIVKLQNLERLIFNGKNLKNFP 57

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TI +  +L+EL +  N++ +LPE +G++  L+ L +  N +  LP  + +L +L  L +
Sbjct: 58  KTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTL 117

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N++  +P+       L  + +  N    R  P  I  L+ LE LD S NQ++ LP+  
Sbjct: 118 YGNQISVLPKDFSLPQNLKILYLSQN--KFRKFPDEILQLQNLEWLDFSENQLKELPEKL 175

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L +L +  N L+V P +  E 
Sbjct: 176 GQLQNLNILYLLGNELKVLPSSFSEF 201



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 3/114 (2%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
            S  +  + LNL     +  +  P  +  L  L +L+L+ N+   +P  IG LS+L  L 
Sbjct: 198 FSEFRSLKSLNLN---YNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLSNLNSLF 254

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           L ANR+ +LP +IG L +L  L L+ NQ++ LP  +  L  L+EL L  +N  S
Sbjct: 255 LEANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQGSNFFS 308



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 23/85 (27%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL-------------------- 144
           ++ LP +IGKL +L SL L EN++  +P  IG L +LK+L                    
Sbjct: 260 LKQLPQNIGKLQNLESLYLQENQLTTLPEEIGSLQNLKELYLQGSNFFSEKEKEKIQKLL 319

Query: 145 ---DLHANRIIELPDSIGDLLSLVY 166
              ++H  R+ + P + G L  L+Y
Sbjct: 320 PKCEIHFERVSKPPRNSGILSRLLY 344


>gi|260812944|ref|XP_002601180.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
 gi|229286471|gb|EEN57192.1| hypothetical protein BRAFLDRAFT_214682 [Branchiostoma floridae]
          Length = 854

 Score =  139 bits (350), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 146/302 (48%), Gaps = 29/302 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS--------------------------- 140
           +P  + KL+ L  LDLS N  + +P  + GL++                           
Sbjct: 4   VPPVVLKLTQLEELDLSWNSGIHLPDGLSGLTNIRFLNLLKTDMATVPPVVWRLTQLEWL 63

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           LK LDL +N +  LP  +G L ++ +LDL   Q+  LP  + RL +LE LDL  N L +L
Sbjct: 64  LKWLDLRSNPLQTLPAEVGQLTNVKHLDLSYCQLRTLPPEVGRLTQLEWLDLSDNPLQTL 123

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  +G    +K L +    L  LP  +G+ + L  L +  N L+ LP  VG+   ++ L 
Sbjct: 124 PAEVGQFTKVKHLDLSYCQLHTLPPEVGRLTQLEWLDLSDNPLQTLPAEVGQFTNVKHLD 183

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           + Y  +  LP  +  L+ L  LD+S N L+++P  +   T +  +++  ++  LR LP  
Sbjct: 184 LSYCQLHTLPPEVGRLTQLEWLDLSANPLQTLPAQVGQLTNVKHLDL--SWCQLRTLPPE 241

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +G L  LE LD+ +N ++ LP     L+ +  L V  NPL  PP  +   G  AV QY  
Sbjct: 242 VGRLTQLEWLDLGSNPLQTLPAEVGQLTNISYLYVYGNPLIKPPSEVCMQGISAVRQYFD 301

Query: 381 DL 382
            L
Sbjct: 302 KL 303


>gi|390347474|ref|XP_798409.3| PREDICTED: leucine-rich repeat protein SHOC-2-like
           [Strongylocentrotus purpuratus]
          Length = 550

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/272 (33%), Positives = 152/272 (55%), Gaps = 13/272 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  +GKL+ L + D+S N +  +P  IG  + L  LDL  N +++LP++ G+L 
Sbjct: 186 NKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDLPETTGNLK 245

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI---VETND 219
            L  L LR N+++ +P +LS  V LEE ++  NN+  LP+  G L SL KL    +  N+
Sbjct: 246 CLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPE--GLLCSLNKLTSICLSRNN 303

Query: 220 LEELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSS 275
               P  +G   Q +++  + +D+N++  +P  +  +   L  L+++ N +  LP  ++S
Sbjct: 304 FTAYP--VGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDNQLTALPLDVNS 361

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
            +S+ EL++  N++  +PE +   T+L  + + NN   LR LP  IGNL  L ELD+  N
Sbjct: 362 WTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNL--LRRLPTRIGNLSRLRELDLEEN 419

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           ++  LP     L  L+ L VQ N L   PR+I
Sbjct: 420 RLEALPSELAYLKELQKLSVQTNQLTQLPRSI 451



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 107/350 (30%), Positives = 156/350 (44%), Gaps = 51/350 (14%)

Query: 67  CVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           C  Q   +L L K++  I  SS K    L       + +  LP  IG L +L  L L+EN
Sbjct: 58  CKEQGDRRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNEN 117

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            +  +P  +  L  LK LDL  N++ E+P+ +  LLSL  L LR N+I+ +   +  L +
Sbjct: 118 SLTTLPEELEKLGLLKVLDLRHNKLKEIPEVVYKLLSLTTLFLRFNRITQVGEDIHNLTK 177

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L  L L  N + +LP  +G L  L    V  N LE LP  IG C+ L  L + +N L  L
Sbjct: 178 LTMLSLRENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHNELLDL 237

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE----------SL 296
           PE  G +  L  L +RYN +  +P ++S+  +L E +V  N +  +PE          S+
Sbjct: 238 PETTGNLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLLCSLNKLTSI 297

Query: 297 C----------------FATT-----------------------LVKMNIGNNFADLRAL 317
           C                FAT                        L K+N+ +N   L AL
Sbjct: 298 CLSRNNFTAYPVGGPQQFATVDTINMDHNQINKIPFGIFSRSKYLTKLNMKDN--QLTAL 355

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           P  + +   + EL++  NQI  LP+    L+ L VL +  N L   P  I
Sbjct: 356 PLDVNSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSNNLLRRLPTRI 405



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 149/281 (53%), Gaps = 33/281 (11%)

Query: 103 DNIEWLPDSI-GKLSSLVSLDLSENRIVAVPATIGG---LSSLKKLDLHANRIIELPDSI 158
           +NI  LP+ +   L+ L S+ LS N   A P  +GG    +++  +++  N+I ++P  I
Sbjct: 278 NNIGILPEGLLCSLNKLTSICLSRNNFTAYP--VGGPQQFATVDTINMDHNQINKIPFGI 335

Query: 159 -GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                 L  L+++ NQ++ALP+ ++    + EL+LG+N +S LP+ I  L SL+ LI+  
Sbjct: 336 FSRSKYLTKLNMKDNQLTALPLDVNSWTSMVELNLGTNQISKLPEDIEHLTSLEVLILSN 395

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L  LP  IG  S LREL ++ NRL+ALP  +  +  L+ LSV+ N + QLP ++  LS
Sbjct: 396 NLLRRLPTRIGNLSRLRELDLEENRLEALPSELAYLKELQKLSVQTNQLTQLPRSIGRLS 455

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
           +L  L    N L S+PE                          IG+LE L++L I++N  
Sbjct: 456 NLVYLKAGENNLASLPE-------------------------EIGSLEQLQQLYINDNLN 490

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           +  LP    + S L+++ ++  PL   P+ +V  G   V+Q
Sbjct: 491 LNHLPFELALCSSLQIMSIENCPLSQIPQEVVAGGPSLVIQ 531



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 122/227 (53%), Gaps = 2/227 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           ++LDL    I  LP S+ DL  LV L L GN++ +LP  +  L  LE L L  N+L++LP
Sbjct: 64  RRLDLSKMSITILPSSLKDLTQLVELYLYGNRLVSLPSEIGCLCNLERLALNENSLTTLP 123

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           + +  L  LK L +  N L+E+P  + +  SL  L + +NR+  + E +  +  L +LS+
Sbjct: 124 EELEKLGLLKVLDLRHNKLKEIPEVVYKLLSLTTLFLRFNRITQVGEDIHNLTKLTMLSL 183

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N IK LP  +  L+ L   DVS N LE +PE +   T L  +++ +N  +L  LP + 
Sbjct: 184 RENKIKALPRGVGKLTLLTTFDVSHNHLEHLPEEIGNCTQLSSLDLQHN--ELLDLPETT 241

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           GNL+ L  L +  N++  +P S      L    V+ N + + P  ++
Sbjct: 242 GNLKCLSRLGLRYNRLTGIPKSLSNCVNLEEFNVEGNNIGILPEGLL 288


>gi|296208239|ref|XP_002807054.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Callithrix jacchus]
          Length = 1574

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 241 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 358

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 359 HSLRTLAVDENFLPELPREI 378



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 164 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 224 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 284 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 344 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 402 GQMQKLRVLNLSDNRLK 418



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 245 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 304

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 425 TKLKELAALWLSDNQ 439



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 208 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 267

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 268 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 327

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 328 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 387

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 388 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 85  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 144

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 145 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 204

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 205 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 262

Query: 367 IVEM 370
           I ++
Sbjct: 263 IGKL 266


>gi|345801801|ref|XP_547339.3| PREDICTED: leucine-rich repeat-containing protein 7 [Canis lupus
           familiaris]
          Length = 1537

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|260812954|ref|XP_002601185.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
 gi|229286476|gb|EEN57197.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
          Length = 871

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/281 (33%), Positives = 150/281 (53%), Gaps = 8/281 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD + +L ++  L L    I+ VP+ +  L+ L++LD+  N  I LPD +  L ++  L
Sbjct: 65  LPDELCRLENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHLPDGLSGLTNIRVL 124

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L G  +  + + L RL +LE LDL  N L +LP  +G L ++K L +    L  LP  +
Sbjct: 125 NLEGTGMGIVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILPPEV 184

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ + L  L + +N L+ LP  VG++  LE L +  N ++ LP  +  L++L  L +S N
Sbjct: 185 GRMTQLEWLDLSFNPLQTLPPEVGQLTNLEWLGLSSNPLQTLPAEVGQLTNLEWLGLSSN 244

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+++P  +   T +  +++      LR LP  +G L  L+ L +++NQ++ LP     L
Sbjct: 245 PLQTLPAEVGQLTNVKHLDMSR--CQLRTLPPEVGRLTQLKWLGLTSNQLQTLPAEVGQL 302

Query: 348 SR---LRVL---RVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           SR   L VL    V  NPL  PP  +   G  A+ QY  +L
Sbjct: 303 SRPYHLDVLCDIDVAGNPLIKPPAEVCRQGITAIRQYFDEL 343


>gi|195109404|ref|XP_001999277.1| GI24424 [Drosophila mojavensis]
 gi|193915871|gb|EDW14738.1| GI24424 [Drosophila mojavensis]
          Length = 694

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 153/281 (54%), Gaps = 12/281 (4%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I  L +L  L L +N +V +P  IG L  L +L+L  N++ ELP  +  L  L +L++  
Sbjct: 179 IENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNLSHNKLKELPPDLYSLPELRHLNISH 238

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N+   L   +S L  LE LD G+NN++SLP  IG L+ L  L++  N ++ELP  I    
Sbjct: 239 NEFEELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTALLLANNHIKELPPDIVYMR 298

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           SL++L +  N L ALPE +G +  L+ L V++N+IK+LP        L EL  S N ++ 
Sbjct: 299 SLQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELP-NFEGNEMLSELHASNNYIDH 357

Query: 292 VPESLCFATTLVKMNIGNNFADLR-----ALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           VP+ LC     +K+       DLR      LP  +  L  L  LDI+NN I VLP +   
Sbjct: 358 VPKELCENLPHLKI------LDLRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLST 411

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
           L+ L  L+V  NP++   R+I++ G   +++ + D  + ++
Sbjct: 412 LAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKE 452



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 90/331 (27%), Positives = 145/331 (43%), Gaps = 69/331 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD-- 160
           ++I+ LP  I  + SL  LDL +N +VA+P  +G L  L+ L +  N I ELP+  G+  
Sbjct: 285 NHIKELPPDIVYMRSLQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELPNFEGNEM 344

Query: 161 ---------------------LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                                L  L  LDLR N+I+ LP  +  L  L  LD+ +N++S 
Sbjct: 345 LSELHASNNYIDHVPKELCENLPHLKILDLRDNKITQLPDEVCLLRNLNRLDITNNSISV 404

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG-------- 251
           LP ++ +L  L  L V+ N ++ +   I QC + R L+  ++R +A   A G        
Sbjct: 405 LPVTLSTLAHLISLQVDGNPIKTIRRDILQCGTARILKTLHDRAQAKERADGGAEDLPCS 464

Query: 252 ------------------------KIHTLEVLSVRYNNIKQLPTTMSSLSS---LRELDV 284
                                   K+     L+V    +  +PT +  L+S   +  +D 
Sbjct: 465 SSAAGSQLSMQQQQQLPANMTDKYKLRHTRTLAVNLEGLTDVPTHVFELASEEKVHVVDF 524

Query: 285 SFNELESVPESLCFATTLV-----KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + N L ++P+ L   + LV       N+ NN      +P  I     +  L++SNN I+ 
Sbjct: 525 ARNHLSTLPKGLQHMSDLVTELVLSHNVINN------VPPFISQFTRITFLNLSNNLIKD 578

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           LP  F +L+ LR L +  N  E  P  + E+
Sbjct: 579 LPPEFGLLNTLRELNIANNRFEALPNALYEL 609



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 95/180 (52%), Gaps = 2/180 (1%)

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           V L  LDL SN L+ +   I +L++L  L +  N L ELP  IG+   L  L + +N+LK
Sbjct: 160 VPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNLSHNKLK 219

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP  +  +  L  L++ +N  ++L   +S+L  L  LD   N + S+P  + F   L  
Sbjct: 220 ELPPDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNNNINSLPGGIGFLVRLTA 279

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           + + NN   ++ LP  I  +  L++LD+  N +  LP+   +L +L+ L VQ N ++  P
Sbjct: 280 LLLANNH--IKELPPDIVYMRSLQKLDLMKNDLVALPEDMGLLRKLQFLYVQHNDIKELP 337



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 95/191 (49%), Gaps = 7/191 (3%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           D+  + + L  L + +N L  +   I    +L  L++  N L  LP  +GK+  L  L++
Sbjct: 154 DAWWNQVPLNNLDLSSNALTHISPKIENLLTLTVLQLHDNALVELPPQIGKLEKLVRLNL 213

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
            +N +K+LP  + SL  LR L++S NE E +   +     L  ++ GNN  ++ +LP  I
Sbjct: 214 SHNKLKELPPDLYSLPELRHLNISHNEFEELNPDISNLHMLEFLDAGNN--NINSLPGGI 271

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L  L  L ++NN I+ LP     +  L+ L + +N L   P    +MG    +Q++  
Sbjct: 272 GFLVRLTALLLANNHIKELPPDIVYMRSLQKLDLMKNDLVALPE---DMGLLRKLQFL-- 326

Query: 382 LVEKRDAKTQP 392
            V+  D K  P
Sbjct: 327 YVQHNDIKELP 337



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 134/326 (41%), Gaps = 50/326 (15%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI- 158
           L DN I  LPD +  L +L  LD++ N I  +P T+  L+ L  L +  N I  +   I 
Sbjct: 374 LRDNKITQLPDEVCLLRNLNRLDITNNSISVLPVTLSTLAHLISLQVDGNPIKTIRRDIL 433

Query: 159 --GDLLSLVYLDLRGNQ-------ISALPVALS----------------------RLVRL 187
             G    L  L  R             LP + S                      +L   
Sbjct: 434 QCGTARILKTLHDRAQAKERADGGAEDLPCSSSAAGSQLSMQQQQQLPANMTDKYKLRHT 493

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIV---ETNDLEELPHTIGQCSSL-RELRVDYNRL 243
             L +    L+ +P  +  L S +K+ V     N L  LP  +   S L  EL + +N +
Sbjct: 494 RTLAVNLEGLTDVPTHVFELASEEKVHVVDFARNHLSTLPKGLQHMSDLVTELVLSHNVI 553

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +P  + +   +  L++  N IK LP     L++LREL+++ N  E++P +L     L 
Sbjct: 554 NNVPPFISQFTRITFLNLSNNLIKDLPPEFGLLNTLRELNIANNRFEALPNALYELQGLE 613

Query: 304 KMNIGNN------FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
            +   +N       A L+ LPR       L  LD+ NN I  +P +   L+ +  L +  
Sbjct: 614 ILIASDNQIKAINVAGLQNLPR-------LSTLDLRNNNIEYVPPTLGNLTNITHLELVG 666

Query: 358 NPLEVPPRNIVEMGAQAVVQYMADLV 383
           NP   P   I+  G  +++ Y+ D +
Sbjct: 667 NPFRQPRHQILMKGTDSIMSYLRDRI 692


>gi|397521140|ref|XP_003830661.1| PREDICTED: leucine-rich repeat-containing protein 7 [Pan paniscus]
          Length = 1537

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|395730377|ref|XP_002810755.2| PREDICTED: leucine-rich repeat-containing protein 7 [Pongo abelii]
          Length = 1537

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|390332547|ref|XP_797039.3| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Strongylocentrotus purpuratus]
          Length = 702

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/259 (35%), Positives = 142/259 (54%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E L + I  L +L  LD+ +N++ ++P  IG L +L++L++  N + ELP  +  L 
Sbjct: 96  NKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLTELPSELSQLH 155

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L++L ++ N+IS L   L  L  LE LD+ +N LS LP+SIGSL  L+ L    N LE 
Sbjct: 156 DLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRKLRSLNASENQLEF 215

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP------------ 270
           +P TIG    +R L +  NRL ALP  +G +  LE + +++N I  LP            
Sbjct: 216 IPTTIGNLKGVRMLELSSNRLPALPLEMGYMSALEQIHIKFNRITSLPPFTKCKDLKELH 275

Query: 271 ------TTMS-----SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
                 T +S     SLSSL  LD+  N++  +PE +   TTL + NI NN  ++ +LP 
Sbjct: 276 AGNNNITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANN--NVSSLPY 333

Query: 320 SIGNLEMLEELDISNNQIR 338
            +GNL  L+ + +  N +R
Sbjct: 334 KLGNLRSLKAMVVDGNPMR 352



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 23/295 (7%)

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           LV L L+ N++  +   I  L +L  LD+H N++  LP +IG+L +L  L++  N ++ L
Sbjct: 88  LVKLILASNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNCLTEL 147

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P  LS+L  L  L +  N +S L D +G L  L+ L V  N L ELP +IG    LR L 
Sbjct: 148 PSELSQLHDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRKLRSLN 207

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
              N+L+ +P  +G +  + +L +  N +  LP  M  +S+L ++ + FN + S+P    
Sbjct: 208 ASENQLEFIPTTIGNLKGVRMLELSSNRLPALPLEMGYMSALEQIHIKFNRITSLP-PFT 266

Query: 298 FATTLVKMNIGN-----------------NFADLRA-----LPRSIGNLEMLEELDISNN 335
               L +++ GN                 N  DLR      +P  +  +  L   +I+NN
Sbjct: 267 KCKDLKELHAGNNNITELSVELLQSLSSLNVLDLRDNKISIIPEEMIQVTTLTRFNIANN 326

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            +  LP     L  L+ + V  NP+      I++ G   +++Y+   +E+    T
Sbjct: 327 NVSSLPYKLGNLRSLKAMVVDGNPMRGIRXXILQRGTVELMKYLRSRIEETPEDT 381



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/182 (34%), Positives = 100/182 (54%), Gaps = 2/182 (1%)

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           D   LV L L  N++  L   +  L  L  LD+  N L+SLP +IG L +L++L +  N 
Sbjct: 84  DQNELVKLILASNKLEQLSNDIQLLPALTVLDVHDNKLNSLPTAIGELRNLQRLNISHNC 143

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP  + Q   L  L V +N++  L + +G+++ LE L V  N + +LP ++ SL  L
Sbjct: 144 LTELPSELSQLHDLLFLHVQHNKISVLQDGLGELNHLENLDVSNNQLSELPESIGSLRKL 203

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R L+ S N+LE +P ++     +  + + +N   L ALP  +G +  LE++ I  N+I  
Sbjct: 204 RSLNASENQLEFIPTTIGNLKGVRMLELSSN--RLPALPLEMGYMSALEQIHIKFNRITS 261

Query: 340 LP 341
           LP
Sbjct: 262 LP 263



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/175 (23%), Positives = 90/175 (51%), Gaps = 5/175 (2%)

Query: 120 SLDLSENRIVAVPATI---GGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQIS 175
           +LD S  +   +P ++      S +  ++   N + E+P ++  L  + V ++L  N+I 
Sbjct: 503 TLDYSNKKSGTIPVSLWEPAKESGVTAVNFSKNMLTEVPANLILLHKTAVDVNLSVNKIP 562

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +  +V +  LDLGSN LSS+P    ++  +++L++  N   ++P  +   ++L  
Sbjct: 563 TLPTEMQMMVNITRLDLGSNGLSSIPSEFETMSMMRELVISYNRFSKVPDVVFTWTNLET 622

Query: 236 LRVDYNRLKALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
           L  + N++  +      ++  +  L ++ N+I ++P  + + +SLR L ++ N  
Sbjct: 623 LLANGNQIGDIDLTGFKRLTKISTLDLQNNDIGEVPPELGTFTSLRSLLLAGNRF 677



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 67/308 (21%), Positives = 119/308 (38%), Gaps = 58/308 (18%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR------------IIEL 154
           W P    K S + +++ S+N +  VPA  G    L+    + NR            I E 
Sbjct: 420 WEP---AKESGVTAVNFSKNMLTEVPANKGEKEPLQNKYFYHNRGTVELMKYLRSRIEET 476

Query: 155 PDSI---------------GDLLSLVYLDLRGNQISALPVAL---SRLVRLEELDLGSNN 196
           P+                  D ++   LD    +   +PV+L   ++   +  ++   N 
Sbjct: 477 PEDTPDSSSASDPSSILGRTDAVAGKTLDYSNKKSGTIPVSLWEPAKESGVTAVNFSKNM 536

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+ +P    +LI L K  V+ N                   +  N++  LP  +  +  +
Sbjct: 537 LTEVP---ANLILLHKTAVDVN-------------------LSVNKIPTLPTEMQMMVNI 574

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK-MNIGNNFADLR 315
             L +  N +  +P+   ++S +REL +S+N    VP+ +   T L   +  GN   D+ 
Sbjct: 575 TRLDLGSNGLSSIPSEFETMSMMRELVISYNRFSKVPDVVFTWTNLETLLANGNQIGDID 634

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
                   L  +  LD+ NN I  +P      + LR L +  N    P   I+  G  A+
Sbjct: 635 LT--GFKRLTKISTLDLQNNDIGEVPPELGTFTSLRSLLLAGNRFRNPRPAILNKGTVAL 692

Query: 376 VQYMADLV 383
           + Y+ D +
Sbjct: 693 LAYLRDRI 700


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L++  N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLT---VLPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 149/323 (46%), Gaps = 57/323 (17%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + L+LQ+   +    LP  IG+L +L +L+LS+N++  +P  IG L +L++L
Sbjct: 181 EIGQLKNLQTLDLQD---NQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQEL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  NR+   P  IG L +L  L    N+++ALP  + +L  L+ L+L +N L+  P  I
Sbjct: 238 YLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEI 297

Query: 205 GSLISLK------------------KLIVETN-DLEE----------------------- 222
           G L +L+                  KL  ++N DL E                       
Sbjct: 298 GQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFEL 357

Query: 223 ----------LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
                      P  I +  +LR L +       LP+ + ++  L+ L++  N +K +P+ 
Sbjct: 358 SLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSE 417

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L  L++  NELE +P+ +     L K+++  N   L+  P  I  L+ L++LD+
Sbjct: 418 IGQLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQN--TLKIFPAEIEQLKKLQKLDL 475

Query: 333 SNNQIRVLPDSFRMLSRLRVLRV 355
           S NQ    P     L  L+ L +
Sbjct: 476 SVNQFTTFPKEIGKLENLQTLNL 498



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L+ LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185


>gi|16904383|ref|NP_065845.1| leucine-rich repeat-containing protein 7 [Homo sapiens]
 gi|114557139|ref|XP_513481.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 3 [Pan
           troglodytes]
 gi|426329990|ref|XP_004026012.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gorilla
           gorilla gorilla]
 gi|50401129|sp|Q96NW7.1|LRRC7_HUMAN RecName: Full=Leucine-rich repeat-containing protein 7; AltName:
           Full=Densin-180; Short=Densin; AltName: Full=Protein
           LAP1
 gi|16755893|gb|AAL28133.1|AF434715_1 densin-180 [Homo sapiens]
 gi|119626867|gb|EAX06462.1| leucine rich repeat containing 7, isoform CRA_b [Homo sapiens]
          Length = 1537

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|436836855|ref|YP_007322071.1| Protein lap1 Lethal protein 413 [Fibrella aestuarina BUZ 2]
 gi|384068268|emb|CCH01478.1| Protein lap1 Lethal protein 413 [Fibrella aestuarina BUZ 2]
          Length = 1090

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 2/266 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            D +   P+ +  L  L +L +   R+  +P ++G L+SL  L L+  R+  +P  +G L
Sbjct: 358 FDTLGQFPEKLTTLPRLRALSIRGGRLGTLPPSLGNLTSLTALTLNNGRLRTVPAELGKL 417

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  LDL  NQ++ LP A+ +L +L  L L +N L +LP S+G L  L  L V  N L 
Sbjct: 418 TALTELDLGSNQLTDLPAAVCQLPQLRRLTLANNQLQALPRSLGQLRGLTDLYVARNKLT 477

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  +G C +LR L  D N L +LP+A+GK+ +L  L +    +  LP T+  L++LR 
Sbjct: 478 TLPAELGLCRNLRILMADENPLTSLPDAIGKLDSLRTLHLARTRLLALPNTIGQLTALRN 537

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +S   L +VPES+     L  + + +  + L  LP S G L  L +L +    +  LP
Sbjct: 538 LTLSGGSLRNVPESIGDCRQLTYLQLTD--STLTGLPASFGKLLNLNQLSLGLPHLTALP 595

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNI 367
            SF  L+++  L +    L   P N+
Sbjct: 596 ASFAQLTKVTYLWLNVPDLLALPENL 621



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 87/264 (32%), Positives = 133/264 (50%), Gaps = 16/264 (6%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD+IGKL SL +L L+  R++A+P TIG L++L+ L L    +  +P+SIGD   L YL
Sbjct: 502 LPDAIGKLDSLRTLHLARTRLLALPNTIGQLTALRNLTLSGGSLRNVPESIGDCRQLTYL 561

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  + ++ LP +  +L+ L +L LG  +L++LP S   L  +  L +   DL  LP  +
Sbjct: 562 QLTDSTLTGLPASFGKLLNLNQLSLGLPHLTALPASFAQLTKVTYLWLNVPDLLALPENL 621

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  + L  L V   RL  LP +VG++  L  L        QL  T+       E +    
Sbjct: 622 GALTQLNTLHVISRRLIGLPNSVGRLSALRHL--------QLDGTIDP-----ETNKPAG 668

Query: 288 ELESVPESLCFATTLVKMNIGN--NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           +L  +P+S+ +   L  +++ +  NF    A+ R    L  L  LD++   I  L D   
Sbjct: 669 QLLQLPDSVVYCKNLTTLSVHHQVNFDGADAI-RKTTRLPKLATLDLTQCGIGDLADINW 727

Query: 346 MLSRLRVLRVQENPLEVPPRNIVE 369
               LR L +Q+N L   P  I+E
Sbjct: 728 KEVPLRSLSLQQNNLRDVPEAILE 751



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 139/307 (45%), Gaps = 58/307 (18%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP S+G L+SL +L L+  R+  VPA +G L++L +LDL +N++ +LP ++  L  L  L
Sbjct: 387 LPPSLGNLTSLTALTLNNGRLRTVPAELGKLTALTELDLGSNQLTDLPAAVCQLPQLRRL 446

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLP-------------------------- 201
            L  NQ+ ALP +L +L  L +L +  N L++LP                          
Sbjct: 447 TLANNQLQALPRSLGQLRGLTDLYVARNKLTTLPAELGLCRNLRILMADENPLTSLPDAI 506

Query: 202 --------------------DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
                               ++IG L +L+ L +    L  +P +IG C  L  L++  +
Sbjct: 507 GKLDSLRTLHLARTRLLALPNTIGQLTALRNLTLSGGSLRNVPESIGDCRQLTYLQLTDS 566

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
            L  LP + GK+  L  LS+   ++  LP + + L+ +  L ++  +L ++PE+L   T 
Sbjct: 567 TLTGLPASFGKLLNLNQLSLGLPHLTALPASFAQLTKVTYLWLNVPDLLALPENLGALTQ 626

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISN----------NQIRVLPDSFRMLSRLR 351
           L  +++ +    L  LP S+G L  L  L +             Q+  LPDS      L 
Sbjct: 627 LNTLHVISR--RLIGLPNSVGRLSALRHLQLDGTIDPETNKPAGQLLQLPDSVVYCKNLT 684

Query: 352 VLRVQEN 358
            L V   
Sbjct: 685 TLSVHHQ 691



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 4/245 (1%)

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
           V+  + +GGL SL+ + LH   +  L D + D   L  + L+   +  L  +LS+L  L 
Sbjct: 293 VSADSLLGGLRSLRSVSLHGVALSSL-DWMADNPDLHAVSLQEGGLPPLTRSLSQLTHLS 351

Query: 189 ELDLGS-NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
            L + S + L   P+ + +L  L+ L +    L  LP ++G  +SL  L ++  RL+ +P
Sbjct: 352 RLTIESFDTLGQFPEKLTTLPRLRALSIRGGRLGTLPPSLGNLTSLTALTLNNGRLRTVP 411

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
             +GK+  L  L +  N +  LP  +  L  LR L ++ N+L+++P SL     L  + +
Sbjct: 412 AELGKLTALTELDLGSNQLTDLPAAVCQLPQLRRLTLANNQLQALPRSLGQLRGLTDLYV 471

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             N   L  LP  +G    L  L    N +  LPD+   L  LR L +    L   P  I
Sbjct: 472 ARN--KLTTLPAELGLCRNLRILMADENPLTSLPDAIGKLDSLRTLHLARTRLLALPNTI 529

Query: 368 VEMGA 372
            ++ A
Sbjct: 530 GQLTA 534



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 81/159 (50%), Gaps = 17/159 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLH----------ANRIIELPDS 157
           LP+++G L+ L +L +   R++ +P ++G LS+L+ L L           A ++++LPDS
Sbjct: 617 LPENLGALTQLNTLHVISRRLIGLPNSVGRLSALRHLQLDGTIDPETNKPAGQLLQLPDS 676

Query: 158 I---GDLLSL-VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +    +L +L V+  +  +   A+    +RL +L  LDL    +  L D     + L+ L
Sbjct: 677 VVYCKNLTTLSVHHQVNFDGADAI-RKTTRLPKLATLDLTQCGIGDLADINWKEVPLRSL 735

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            ++ N+L ++P  I +   L  + + YN    LP A  +
Sbjct: 736 SLQQNNLRDVPEAILEAPQLTTINLVYN--HQLPRAFNR 772


>gi|328786949|ref|XP_393738.4| PREDICTED: protein lap1-like [Apis mellifera]
          Length = 990

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 3/273 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    +L+ +D+  N     PD+I 
Sbjct: 71  LSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L+ L+L  NNL +LP S+  LI+L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  +P+ +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             + +S NE+  +P+SLC+  T+V + + +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDN--QLNALPNDIGQMSNLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LP S  +L +L  L V  N L   P  I    A
Sbjct: 309 LPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTA 341



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 155/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P+ +++L RL   D   N +  +P  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ +LP ++    ++  L+VD N+L ALP  +G++  LE L V  N ++ LP
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+V  N L  +P  +   T L  +++ +N  +L  +P  +G+L  L+ L
Sbjct: 311 SSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSN--NLTRVPPELGHLSSLKVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 143/263 (54%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  +L S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRL+ L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q   L       N +  +P  V     + ++ +  N I QLP ++  L ++  L
Sbjct: 217 IPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTL 276

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L ++P  +   + L ++ +  NF  L  LP SIG L  L  L++ NN +R LP 
Sbjct: 277 KVDDNQLNALPNDIGQMSNLEELIVTKNF--LEYLPSSIGLLRKLHCLNVDNNYLRCLPP 334

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
                + L +L ++ N L  VPP
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPP 357



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 25/255 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+++ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    +L+ + +  N  E  P  I     LREL ++   ++ LP   G++  L+ L
Sbjct: 102 LPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALKTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRIPL 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           +I  L  L   D                       +S+N+I  LPDS   L  +  L+V 
Sbjct: 220 NINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVD 279

Query: 357 ENPLEVPPRNIVEMG 371
           +N L   P +I +M 
Sbjct: 280 DNQLNALPNDIGQMS 294



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 108/186 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P+ + G   +  + L +N I +LPDS+  L 
Sbjct: 212 NDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L V+ N L  
Sbjct: 272 TIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRC 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  +G + +L+VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 92/160 (57%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +G RD+++ +   + I  LPDS+  L ++V+L + +N++ A+P  IG +S+L++L +
Sbjct: 242 SEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIV 301

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  L++  N +  LP  +     L  L L SNNL+ +P  +G 
Sbjct: 302 TKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGH 361

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L SLK L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 362 LSSLKVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +L +L +D NR+K LP  + + H L VLS+  N +  LP  ++SL +L  LD+S N +  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSI-- 99

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
                                  + LP SI   + L  +DIS N     PD+   +  LR
Sbjct: 100 -----------------------KELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLR 136

Query: 352 VLRVQENPLEVPPRNIVEMGA 372
            L + +  +E  P N   + A
Sbjct: 137 ELYINDAYIEYLPANFGRLSA 157


>gi|51476914|emb|CAH18423.1| hypothetical protein [Homo sapiens]
          Length = 1530

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 77  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 136

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 137 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 196

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 197 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 256

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 257 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 314

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 315 HSLRTLAVDENFLPELPREI 334



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 138/257 (53%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 120 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 179

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 180 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 239

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 240 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 299

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 300 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 357

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRV  + +N L+
Sbjct: 358 GQMQKLRVPNLSDNRLK 374



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 115/195 (58%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 201 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 260

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 261 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 320

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L V ++  N +K LP + 
Sbjct: 321 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVPNLSDNRLKNLPFSF 380

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 381 TKLKELAALWLSDNQ 395



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 164 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 223

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 224 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 283

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 284 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 343

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L   N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 344 SLRSNKLEFLPEEIGQMQKLRVPNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 399



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 41  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 100

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 101 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 160

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 161 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 218

Query: 367 IVEM 370
           I ++
Sbjct: 219 IGKL 222


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 139/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 55  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 114

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 115 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 174

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++S N+L ++P  +    
Sbjct: 175 NRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQ 234

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 235 NLQELYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRL 292

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 293 TVFPKEIGQL 302



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 141/262 (53%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 65  LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 124

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 125 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 184

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L++  N +  LP  +  L +L+EL +  N
Sbjct: 185 GQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNN 244

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 245 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQL 302

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 303 QNLQDLELLMNPLSLKERKRIQ 324



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 59  GEKLT----ALPKEIGQLKNLQELNLKWNLLT---VLPKEIGQLENLQELDLRDNQLATF 111

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 112 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 171

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 172 LSENRLTALPKEIGQLKNLQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIG 231

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 232 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNN- 290

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 291 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 349

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 350 QEEPLKV 356



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 145/303 (47%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 272 LPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 331

Query: 159 GDL------------------------LSLVYLD--------------LRGNQI-----S 175
            DL                        LSL Y D              LRG  +     S
Sbjct: 332 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFS 391

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L ++P  IG L +L+ L +E N+LE LP  IGQ  +L++
Sbjct: 392 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 451

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 452 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 511

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 512 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 569

Query: 356 QEN 358
           Q N
Sbjct: 570 QNN 572



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 393 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 452

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 453 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 512

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 513 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 572

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 573 QFSFEEQERI 582



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L+ LP  IG L +L++
Sbjct: 41  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQE 100

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 101 LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 160

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 161 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTILPKEIGQLQNLQTLNL 218

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S+NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 219 SDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 256



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 370 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 421

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 422 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 466

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  LP  +  L +L+ELD++ N
Sbjct: 467 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDN 526

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ      SF   
Sbjct: 527 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQ 579

Query: 348 SRLRVL 353
            R+R L
Sbjct: 580 ERIRKL 585



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 419 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 475

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  + LP  I
Sbjct: 476 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 535

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 536 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 574



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 488 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 544

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 545 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 575


>gi|344278808|ref|XP_003411184.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7-like [Loxodonta africana]
          Length = 1540

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 142/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL
Sbjct: 79  NDLSSLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 139 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSE 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L
Sbjct: 199 LPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 259 LLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPS 316

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 317 TVGYLHSLRTLAVDENFLPELPREI 341



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTVGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP ++G L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTVGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  VG +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTVGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|124007858|ref|ZP_01692559.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986620|gb|EAY26410.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 375

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 155/276 (56%), Gaps = 8/276 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            NKL +    LP+ + +L+ L +LDL+ N+   +P +I  L+ L++L ++ N +  LP++
Sbjct: 102 HNKLAN----LPNDLAQLAHLKTLDLNVNQFRQIPLSITQLTRLEQLLMNYNSLESLPEN 157

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
              L +L  L L  NQ+   P+ ++ L  LE L LG+N  S+LP  I  L  LK L +  
Sbjct: 158 FKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFSTLPAEISLLQQLKDLSLYN 217

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             ++ +P  +G+ S+LREL + YN+L  LP  +G +  L  L V +N+I ++P ++ +L 
Sbjct: 218 VPIQNIPQQVGRLSNLRELSMKYNQLHILPSEIGSLWRLIALEVDHNHIDKVPESIENLR 277

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L  L +  N+L+S+   +     L  +++ NN   L  LP  IG L+ LE L + NNQ+
Sbjct: 278 KLEYLSLRNNQLKSITGGIGQLQNLKSLHLDNN--QLTELPEEIGKLKNLEVLSVENNQL 335

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           + +P +   L +L+   +++N  ++P + I E+  Q
Sbjct: 336 KAVPPALYQLDKLKTFNLRDN--QIPLKKISEVHRQ 369



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 87/262 (33%), Positives = 138/262 (52%), Gaps = 3/262 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++E L   +GKL+ L  L L  N++  +P  +  L+ LK LDL+ N+  ++P SI  L  
Sbjct: 81  HMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLNVNQFRQIPLSITQLTR 140

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L +  N + +LP    +L  L+ L L  N L   P  I  L  L+ L +  N    L
Sbjct: 141 LEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFSTL 200

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  I     L++L +    ++ +P+ VG++  L  LS++YN +  LP+ + SL  L  L+
Sbjct: 201 PAEISLLQQLKDLSLYNVPIQNIPQQVGRLSNLRELSMKYNQLHILPSEIGSLWRLIALE 260

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N ++ VPES+     L  +++ NN   L+++   IG L+ L+ L + NNQ+  LP+ 
Sbjct: 261 VDHNHIDKVPESIENLRKLEYLSLRNN--QLKSITGGIGQLQNLKSLHLDNNQLTELPEE 318

Query: 344 FRMLSRLRVLRVQENPLE-VPP 364
              L  L VL V+ N L+ VPP
Sbjct: 319 IGKLKNLEVLSVENNQLKAVPP 340



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 129/249 (51%), Gaps = 2/249 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
            +L+ SE  +  +   +G L+ L+ L L  N++  LP+ +  L  L  LDL  NQ   +P
Sbjct: 73  TALNFSELHMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLNVNQFRQIP 132

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           +++++L RLE+L +  N+L SLP++   L +LK L +  N L++ P  I +   L  L +
Sbjct: 133 LSITQLTRLEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWL 192

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N    LP  +  +  L+ LS+    I+ +P  +  LS+LREL + +N+L  +P  +  
Sbjct: 193 GANVFSTLPAEISLLQQLKDLSLYNVPIQNIPQQVGRLSNLRELSMKYNQLHILPSEIGS 252

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L+ + + +N  D   +P SI NL  LE L + NNQ++ +      L  L+ L +  N
Sbjct: 253 LWRLIALEVDHNHID--KVPESIENLRKLEYLSLRNNQLKSITGGIGQLQNLKSLHLDNN 310

Query: 359 PLEVPPRNI 367
            L   P  I
Sbjct: 311 QLTELPEEI 319



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/129 (27%), Positives = 64/129 (49%), Gaps = 25/129 (19%)

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
            ++ L   VGK+  L+ L + +N +  LP  ++ L+ L+ LD++ N+             
Sbjct: 81  HMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLNVNQF------------ 128

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
                        R +P SI  L  LE+L ++ N +  LP++F+ L+ L+VL++ +N L+
Sbjct: 129 -------------RQIPLSITQLTRLEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLK 175

Query: 362 VPPRNIVEM 370
             P  I E+
Sbjct: 176 DFPLVITEL 184


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L  LP+ IG L+ L+ L    N++   P     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVLPKEIGQL 300



 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 143/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P+ +     L  +    N   L A P+ +G L+ L+ L++ NN++ VLP     L
Sbjct: 243 RLTVLPKEIGQLQNLQMLCSPEN--RLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 162/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +  LP  +  L +L+ L    N L + P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L  LP+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAEDGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 164/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L  L   ENR+ A P  +G 
Sbjct: 220 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQMLCSPENRLTAFPKEMGQ 276

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 277 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 336

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 337 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 396

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 397 RLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 456

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  LP  I  L+
Sbjct: 457 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLPAEIEQLK 514

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 515 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 565



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 140/303 (46%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
            P  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 FPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 330 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L  +P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQR 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  105 bits (262), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 115/222 (51%), Gaps = 7/222 (3%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L++L L+      LP  I  L +L YL L  N +  +P  + +L  LE L+
Sbjct: 369 PKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALN 428

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L++L +  N L+  P  I Q   L++L +  N+    P+ +G
Sbjct: 429 LEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIG 488

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           K+  L+ L+++ N +  LP  +  L +L+ELD++ N+   +P+ +     L  +++ NN 
Sbjct: 489 KLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN- 547

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             L  LP  IG L+ L+ L + NNQ      SF    R+R L
Sbjct: 548 -QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQERIRKL 583



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ NN      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNN--QFTILPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQL 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 1/165 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N +   PA I  L
Sbjct: 408 LNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQL 467

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
             L+KLDL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  +
Sbjct: 468 KKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFT 527

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            LP  IG L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 528 VLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|340721753|ref|XP_003399279.1| PREDICTED: protein lap1-like [Bombus terrestris]
          Length = 1040

 Score =  139 bits (349), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 142/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    +L+ +D+  N     PD+I 
Sbjct: 71  LSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L+ L+L  NNL +LP S+  LI+L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  +P+ +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             + +S NE+  +P+SLC+  T+V + + +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDN--QLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L V  N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNVDNNYLRCLPPEI 336



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 156/268 (58%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P+ +++L RL   D   N +  +P  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ +LP ++    ++  L+VD N+L ALP  +G++ +LE L V  N ++ LP
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+V  N L  +P  +   T L  +++ +N  +L  +P  +G+L  L+ L
Sbjct: 311 SSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSN--NLTRVPPELGHLSSLKVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 144/264 (54%), Gaps = 3/264 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  +L S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRL+ L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q   L       N +  +P  V     + ++ +  N I QLP ++  L ++  L
Sbjct: 217 VPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTL 276

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L ++P  +   ++L ++ +  NF  L  LP SIG L  L  L++ NN +R LP 
Sbjct: 277 KVDDNQLNALPNDIGQMSSLEELIVTKNF--LEYLPSSIGLLRKLHCLNVDNNYLRCLPP 334

Query: 343 SFRMLSRLRVLRVQENPL-EVPPR 365
                + L +L ++ N L  VPP 
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPPE 358



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 25/256 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+++ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    +L+ + +  N  E  P  I     LREL ++   ++ LP   G++  L+ L
Sbjct: 102 LPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALKTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRVPL 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           +I  L  L   D                       +S+N+I  LPDS   L  +  L+V 
Sbjct: 220 NINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVD 279

Query: 357 ENPLEVPPRNIVEMGA 372
           +N L   P +I +M +
Sbjct: 280 DNQLNALPNDIGQMSS 295



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 108/186 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P+ + G   +  + L +N I +LPDS+  L 
Sbjct: 212 NDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L V+ N L  
Sbjct: 272 TIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRC 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  +G + +L+VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 92/160 (57%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +G RD+++ +   + I  LPDS+  L ++V+L + +N++ A+P  IG +SSL++L +
Sbjct: 242 SEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIV 301

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  L++  N +  LP  +     L  L L SNNL+ +P  +G 
Sbjct: 302 TKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGH 361

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L SLK L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 362 LSSLKVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401


>gi|119626866|gb|EAX06461.1| leucine rich repeat containing 7, isoform CRA_a [Homo sapiens]
          Length = 1527

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 241 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 358

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 359 HSLRTLAVDENFLPELPREI 378



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 164 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 224 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 284 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 344 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 402 GQMQKLRVLNLSDNRLK 418



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 245 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 304

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 425 TKLKELAALWLSDNQ 439



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 208 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 267

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 268 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 327

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 328 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 387

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 388 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 85  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 144

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 145 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 204

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 205 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 262

Query: 367 IVEM 370
           I ++
Sbjct: 263 IGKL 266


>gi|156373929|ref|XP_001629562.1| predicted protein [Nematostella vectensis]
 gi|261277881|sp|A7SFP1.1|SHOC2_NEMVE RecName: Full=Leucine-rich repeat protein soc-2 homolog
 gi|156216565|gb|EDO37499.1| predicted protein [Nematostella vectensis]
          Length = 577

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 150/281 (53%), Gaps = 8/281 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L  LV+LD+S N I  +PA IG    +  LDL  N I  LPDSIG L 
Sbjct: 211 NKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLT 270

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           ++  L LR NQ+S+LP +L+    ++E ++  NN++ LP+ +  SL +L  L +  N  E
Sbjct: 271 AMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFE 330

Query: 222 ELPHTI-GQCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             P     Q   +    +++NR++ +P  V  K   L  L+V+ N +  LP    S  SL
Sbjct: 331 VFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISL 390

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            EL+V+ N++  +PE + +   L  + + NN   L+ LPR IG L  L  LDI  N++  
Sbjct: 391 VELNVATNQISKLPEDIQWLVNLEVLILSNNL--LKKLPRGIGALRKLRVLDIEENKLES 448

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +P     L  L  L +Q N L   PR+I   G  + V Y++
Sbjct: 449 IPTEIEYLRSLERLVLQSNCLGSLPRSI---GYLSSVTYLS 486



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 161/327 (49%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++IE LP  IG    + SLDL  N I ++P +IG L+++ +L L  N++  LPDS+ +  
Sbjct: 234 NHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCS 293

Query: 163 SLVYLDLRGNQISALPVAL----------------------------------------- 181
            +   ++ GN I+ LP  L                                         
Sbjct: 294 GIDEFNIEGNNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRM 353

Query: 182 --------SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
                   ++   L +L++  N L+SLP   GS ISL +L V TN + +LP  I    +L
Sbjct: 354 QKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVELNVATNQISKLPEDIQWLVNL 413

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L VL +  N ++ +PT +  L SL  L +  N L S+P
Sbjct: 414 EVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLGSLP 473

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ-IRVLPDSFRMLSRLRV 352
            S+ + +++  +++G N  +L ++P+ IGN+E LE+L +++N+ ++ LP    +   L++
Sbjct: 474 RSIGYLSSVTYLSVGEN--ELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQI 531

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   V+QY+
Sbjct: 532 MSIENCPLSALPSQIVAGGPSLVIQYL 558



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 145/314 (46%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP-----------------------ATIGGLS 139
           +N+  LPD++ KL+ L  LDL  N+I  +P                       + IG L 
Sbjct: 142 NNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLK 201

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
            L++L L  N+I  LP  IG L+ LV LD+  N I  LP  +   V +  LDL  N++ S
Sbjct: 202 LLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPS 261

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV-GKIHTLEV 258
           LPDSIG L ++ +L +  N L  LP ++  CS + E  ++ N +  LPE +   +  L  
Sbjct: 262 LPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNLTS 321

Query: 259 LSVRYNNIKQLPT-------------------------TMSSLSSLRELDVSFNELESVP 293
           L++  N  +  P                            +    L +L+V  N+L S+P
Sbjct: 322 LTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDNQLTSLP 381

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                  +LV++N+  N   +  LP  I  L  LE L +SNN ++ LP     L +LRVL
Sbjct: 382 LDFGSWISLVELNVATN--QISKLPEDIQWLVNLEVLILSNNLLKKLPRGIGALRKLRVL 439

Query: 354 RVQENPLEVPPRNI 367
            ++EN LE  P  I
Sbjct: 440 DIEENKLESIPTEI 453



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 162/353 (45%), Gaps = 57/353 (16%)

Query: 67  CVGQDGEKLSLIKLASLI---EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDL 123
           C  +   +L L K A  +   E+      R+L L     + I  LP  +G L +L +L L
Sbjct: 83  CREEGATRLDLSKAAVTVLPKELKELTSLRELYLYG---NRIAVLPPEVGLLPNLETLAL 139

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           SEN +  +P  +  L+ LK LDL  N+I E+PD I  L +L  L LR N+IS +   +  
Sbjct: 140 SENNLTTLPDNLVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGN 199

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L  LE L L  N +  LP  IG L+ L  L +  N +E LP  IG C  +  L + +N +
Sbjct: 200 LKLLERLSLRENKIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDI 259

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL------- 296
            +LP+++G++  +  L +RYN +  LP ++++ S + E ++  N +  +PE L       
Sbjct: 260 PSLPDSIGRLTAMTRLGLRYNQLSSLPDSLANCSGIDEFNIEGNNIAELPEKLLSSLKNL 319

Query: 297 ---------------------CFATTLV---------------------KMNIGNNFADL 314
                                C   T +                     K+N+ +N   L
Sbjct: 320 TSLTLSRNKFEVFPAGPPKQFCQVNTFIMEHNRMQKIPFGVFNKAKYLSKLNVKDN--QL 377

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +LP   G+   L EL+++ NQI  LP+  + L  L VL +  N L+  PR I
Sbjct: 378 TSLPLDFGSWISLVELNVATNQISKLPEDIQWLVNLEVLILSNNLLKKLPRGI 430



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 124/258 (48%), Gaps = 32/258 (12%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSI-GKLSSLVSLDLSENRIVAVPA---------------- 133
           G  + N++    +NI  LP+ +   L +L SL LS N+    PA                
Sbjct: 294 GIDEFNIEG---NNIAELPEKLLSSLKNLTSLTLSRNKFEVFPAGPPKQFCQVNTFIMEH 350

Query: 134 ---------TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
                           L KL++  N++  LP   G  +SLV L++  NQIS LP  +  L
Sbjct: 351 NRMQKIPFGVFNKAKYLSKLNVKDNQLTSLPLDFGSWISLVELNVATNQISKLPEDIQWL 410

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           V LE L L +N L  LP  IG+L  L+ L +E N LE +P  I    SL  L +  N L 
Sbjct: 411 VNLEVLILSNNLLKKLPRGIGALRKLRVLDIEENKLESIPTEIEYLRSLERLVLQSNCLG 470

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE-LESVPESLCFATTLV 303
           +LP ++G + ++  LSV  N +  +P  + ++ SL +L ++ NE L+S+P  L    +L 
Sbjct: 471 SLPRSIGYLSSVTYLSVGENELVSVPQEIGNMESLEQLYLNDNENLQSLPYELVLCGSLQ 530

Query: 304 KMNIGNNFADLRALPRSI 321
            M+I N    L ALP  I
Sbjct: 531 IMSIEN--CPLSALPSQI 546



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 2/183 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LDL    ++ LP  +  L SL++L +  N +  LP  +G   +L  L +  N L  LP+ 
Sbjct: 91  LDLSKAAVTVLPKELKELTSLRELYLYGNRIAVLPPEVGLLPNLETLALSENNLTTLPDN 150

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           + K+  L+VL +R+N IK++P  +  L++L  L + FN +  V   +     L ++++  
Sbjct: 151 LVKLTKLKVLDLRHNKIKEIPDVIYKLTTLTTLYLRFNRISVVESGIGNLKLLERLSLRE 210

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   ++ LPR IG L  L  LDIS+N I  LP        +  L +Q N +   P +I  
Sbjct: 211 N--KIKILPRVIGQLVHLVTLDISHNHIENLPAEIGNCVHMTSLDLQHNDIPSLPDSIGR 268

Query: 370 MGA 372
           + A
Sbjct: 269 LTA 271


>gi|119626868|gb|EAX06463.1| leucine rich repeat containing 7, isoform CRA_c [Homo sapiens]
          Length = 1574

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 241 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 301 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 358

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 359 HSLRTLAVDENFLPELPREI 378



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 139/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 164 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 224 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 284 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 344 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 401

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 402 GQMQKLRVLNLSDNRLK 418



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 245 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 304

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 305 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 364

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 365 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 424

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 425 TKLKELAALWLSDNQ 439



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 208 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 267

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 268 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 327

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 328 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 387

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 388 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 443



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 85  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 144

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 145 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 204

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 205 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 262

Query: 367 IVEM 370
           I ++
Sbjct: 263 IGKL 266


>gi|380015607|ref|XP_003691791.1| PREDICTED: protein lap1-like [Apis florea]
          Length = 994

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 143/273 (52%), Gaps = 3/273 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    +L+ +D+  N     PD+I 
Sbjct: 71  LSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L+ L+L  NNL +LP S+  LI+L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  +P+ +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             + +S NE+  +P+SLC+  T+V + + +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDN--QLNALPNDIGQMSNLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LP S  +L +L  L V  N L   P  I    A
Sbjct: 309 LPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTA 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 155/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P+ +++L RL   D   N +  +P  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ +LP ++    ++  L+VD N+L ALP  +G++  LE L V  N ++ LP
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+V  N L  +P  +   T L  +++ +N  +L  +P  +G+L  L+ L
Sbjct: 311 SSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSN--NLTRVPPEVGHLSSLKVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 143/263 (54%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  +L S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRL+ L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q   L       N +  +P  V     + ++ +  N I QLP ++  L ++  L
Sbjct: 217 IPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTL 276

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L ++P  +   + L ++ +  NF  L  LP SIG L  L  L++ NN +R LP 
Sbjct: 277 KVDDNQLNALPNDIGQMSNLEELIVTKNF--LEYLPSSIGLLRKLHCLNVDNNYLRCLPP 334

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
                + L +L ++ N L  VPP
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPP 357



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 82/255 (32%), Positives = 127/255 (49%), Gaps = 25/255 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+++ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    +L+ + +  N  E  P  I     LREL ++   ++ LP   G++  L+ L
Sbjct: 102 LPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALKTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRIPL 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           +I  L  L   D                       +S+N+I  LPDS   L  +  L+V 
Sbjct: 220 NINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVD 279

Query: 357 ENPLEVPPRNIVEMG 371
           +N L   P +I +M 
Sbjct: 280 DNQLNALPNDIGQMS 294



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 108/186 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P+ + G   +  + L +N I +LPDS+  L 
Sbjct: 212 NDIRRIPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L V+ N L  
Sbjct: 272 TIVTLKVDDNQLNALPNDIGQMSNLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRC 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  VG + +L+VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPPEIGSCTALSLLSLRSNNLTRVPPEVGHLSSLKVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 92/160 (57%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +G RD+++ +   + I  LPDS+  L ++V+L + +N++ A+P  IG +S+L++L +
Sbjct: 242 SEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSNLEELIV 301

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  L++  N +  LP  +     L  L L SNNL+ +P  +G 
Sbjct: 302 TKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPEVGH 361

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L SLK L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 362 LSSLKVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 63/141 (44%), Gaps = 25/141 (17%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +L +L +D NR+K LP  + + H L VLS+  N +  LP  ++SL +L  LD+S N +  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSI-- 99

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
                                  + LP SI   + L  +DIS N     PD+   +  LR
Sbjct: 100 -----------------------KELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLR 136

Query: 352 VLRVQENPLEVPPRNIVEMGA 372
            L + +  +E  P N   + A
Sbjct: 137 ELYINDAYIEYLPANFGRLSA 157


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+ ++ + I    SL+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L++D N+L  LP+++G + ++E L   +N I+ LP+++  LS++R    
Sbjct: 270 ESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  + F   +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGFWKHVTVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRMKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 161/337 (47%), Gaps = 29/337 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN    ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q + L+E  +D NRL  +P  +G +  L  L V  NNI  
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDT 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +   +S   SL++L +S N L+ +PES+     L  + I  N   L  LP SIG L  +E
Sbjct: 245 VEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDEN--QLMYLPDSIGGLISIE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           ELD S N+I  LP S   LS +R      N L ++PP
Sbjct: 303 ELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPP 339



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/296 (30%), Positives = 157/296 (53%), Gaps = 7/296 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N+++ + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL++L +  N L+ LPE++G +  L  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKIDENQLMYLPDSIGGLISIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +N+  L+ LP  IG  + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLSNIRTFAADHNY--LQQLPPEIGFWKHVTVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR----DAKTQPVKQK 396
             + +L+V+ + +N ++  P +  ++  Q    +++D   K       +T P  QK
Sbjct: 365 GDMQKLKVINLSDNRMKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDPETQK 419



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 158/280 (56%), Gaps = 8/280 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  L  L +L  LD+  NN+  + D I    SL+ L++ +N +++LP
Sbjct: 210 KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP+++G +  +E L   +N I+ LP+++  L  +R    
Sbjct: 270 ESIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +    +   + + +N   L +LP  +G+++ L+ +++S+N++R LP SF
Sbjct: 330 DHNFLTQLPPEIGTWKSATVLFLHSN--KLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 345 RMLSRLRVLRVQEN---PLEVPPRNIVEMGAQAVV--QYM 379
             L +L  + + +N   PL +P +   +   Q VV   YM
Sbjct: 388 TRLQQLTAMWLSDNQSKPL-IPLQKETDQDTQKVVLTNYM 426



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 163/338 (48%), Gaps = 29/338 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN +  ++ C C  G++    SL     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLLVRLVPCRCLRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D N+L  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +   +S   SL++L +S N ++ +PES+     L  + +  N   L  LP SIG L  +E
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDEN--QLMYLPDSIGGLTAIE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR 365
           +LD S N+I  LP S   L ++R      N L ++PP 
Sbjct: 303 DLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPE 340



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  N++  +P  +G+L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN +  LP+SIG+L  L  L V+ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +++ +L   +N ++ALP ++G +  +   +  +N + QLP  + +  S   L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LES+PE +     L  +N+ +N   LR LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDN--RLRNLPFSFTRLQQLTAMWLSDNQSKPL 406



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 26/149 (17%)

Query: 220 LEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LE++P  I     +L EL +D N+++ LP+ +    +L  LS+  N++  LP ++++L +
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLIN 93

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELDVS N ++  PE+                         I N ++L  ++ S N I 
Sbjct: 94  LRELDVSKNGIQEFPEN-------------------------IKNCKVLTIVEASVNPIS 128

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPD F  L  L  L + +  L+  P N 
Sbjct: 129 KLPDGFSQLLNLTQLYLNDAFLDFLPANF 157



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 278 SLRELDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           ++  LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N 
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDND 80

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           + +LP S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|403257784|ref|XP_003921474.1| PREDICTED: leucine-rich repeat-containing protein 7 [Saimiri
           boliviensis boliviensis]
          Length = 1537

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQILPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQILPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L++ P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQILPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|45361617|ref|NP_989386.1| leucine rich repeat containing 1 [Xenopus (Silurana) tropicalis]
 gi|40675662|gb|AAH64859.1| hypothetical protein MGC75617 [Xenopus (Silurana) tropicalis]
          Length = 524

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 108/310 (34%), Positives = 159/310 (51%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LPDS  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +LV L+LR N ++ LP +L++L RLEELD+G+N 
Sbjct: 126 DLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L +LP++IGSL  LK L ++ N L +LP  IG   +L  L +  N+L+ LPE +  + +L
Sbjct: 186 LYNLPETIGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V +N+I+ LP  +  L +L  L V  N L  + + +    +L ++ +  N   L  
Sbjct: 246 TDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTEN--QLLV 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LPRSIG L+ L  L+I  N++  LP        L V  V+EN L   P  I    A+A  
Sbjct: 304 LPRSIGKLKKLCNLNIDRNKLMSLPKEIGGCCGLNVFCVRENRLSRIPSEI----AKATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG LS+LVSL+L EN +  +P ++  L  L++LD+  N +  LP++IG L  L
Sbjct: 140 LQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLYKL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ LP  +  L  L  LDL  N L  LP+ I  L SL  L+V  N +E LP
Sbjct: 200 KDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEVLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+  +L  L+VD NRL  L + +G+  +L  L +  N +  LP ++  L  L  L++
Sbjct: 260 DGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTENQLLVLPRSIGKLKKLCNLNI 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +     L    +  N   L  +P  I     L  LD++ N++  LP S 
Sbjct: 320 DRNKLMSLPKEIGGCCGLNVFCVREN--RLSRIPSEIAKATELHVLDVAGNRLTHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TSL-KLKALWLSDN 390



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L  LP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N L  LPE +G ++ L+ L +  N +  LP  +  L +L  LD+S N
Sbjct: 171 AQLHRLEELDIGNNELYNLPETIGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE +PE +    +L  + + +N   +  LP  IG L+ L  L +  N++  L D     
Sbjct: 231 KLERLPEEISGLKSLTDLLVSHN--SIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGEC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L V PR+I
Sbjct: 289 ESLTELILTENQLLVLPRSI 308



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+LM     L D IG+  SL  L L+EN+++ +P +IG L  L  L++  N+++ LP  
Sbjct: 275 QNRLMQ----LTDCIGECESLTELILTENQLLVLPRSIGKLKKLCNLNIDRNKLMSLPKE 330

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG    L    +R N++S +P  +++   L  LD+  N L+ LP S+ SL  LK L +  
Sbjct: 331 IGGCCGLNVFCVRENRLSRIPSEIAKATELHVLDVAGNRLTHLPLSLTSL-KLKALWLSD 389

Query: 218 N 218
           N
Sbjct: 390 N 390



 Score = 43.5 bits (101), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 33/118 (27%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   S SL EL +  N+L  +P+       L K+ + +N  ++
Sbjct: 14  VESVDKRHCSLLAVPEEIYRYSRSLEELLLDANQLRELPKQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           + LP  I N   L ELD+S N+I  +P+S      L+V     NPL   P +  ++ +
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLAS 129


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 172/318 (54%), Gaps = 34/318 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  +G L++L SL L +NR++A+P +IG L++L+ + L  N++ E+P  I +  
Sbjct: 24  NEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTNLQVISLEENKLKEIPSQIENCG 83

Query: 163 SLVYLDLRGNQISALPV--ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           SL  +D+  N +  LP+   +SRL  L+EL +  N + S+P ++  L +LK L V +N L
Sbjct: 84  SLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHL 143

Query: 221 -----------------------EELPHTIGQCSSLRELRVDYNRLKALPE--AVGKIHT 255
                                   ELP  I + ++LREL V  N+++++P+  A+ ++  
Sbjct: 144 TSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTN 203

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           LEVL +RYN +  LP ++S  ++LRELD ++N L   P  +     L +++  +N   LR
Sbjct: 204 LEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHN--SLR 261

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
            +P  IG LE +E LD+S NQ++ LP     ++ L+ L    N +   P   VE+  +A+
Sbjct: 262 GIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLP---VEL--EAL 316

Query: 376 VQYMADLVEKRDAKTQPV 393
              +  L    +A T P 
Sbjct: 317 ETSLTLLSADNNAITDPT 334



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/284 (29%), Positives = 145/284 (51%), Gaps = 27/284 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  I +L  L  L ++ N+I ++P T+  L++LK LD+ +N +      + D+  LV L
Sbjct: 100 IPRKISRLKLLKELRVAHNQIDSIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVL 159

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD--SIGSLISLKKLIVETNDLEELPH 225
           +   N  + LPV ++++  L EL +  N + S+PD  ++  L +L+ L +  N +  LP 
Sbjct: 160 NFAKNAATELPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPG 219

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +I + ++LREL   YN L   P  + ++  L+ +   +N+++ +P  + +L  +  LD+S
Sbjct: 220 SISKFTNLRELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDIGTLEEVEYLDLS 279

Query: 286 FNELESVPESLCFATTLVKMNIGNN-------------------FADLRA-----LPRSI 321
           +N+L+ +P  + F T+L  ++  NN                    AD  A     LP  +
Sbjct: 280 YNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVEL 339

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           GNL  LE  D+S+N +  LP S + L  L    V  N L  +PP
Sbjct: 340 GNLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNRLTTIPP 383



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 122/227 (53%), Gaps = 24/227 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP SI +L SLV  +++ NR+  +P  + GL SL +L L  N +I +P  IG L SL  L
Sbjct: 358 LPSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTL 417

Query: 168 DLRGNQISALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
            L GNQ  ++P  +  +L  LE+L+ G N L S+  SI  L  L  L ++ N+L  LP  
Sbjct: 418 SLDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPRE 477

Query: 227 IGQCSSL-----------------------RELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +G+C+ L                       R L +D N L  LP+ +G +  L  L  R 
Sbjct: 478 LGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRD 537

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           N I +LP + SSL+SLRELD+S N+  ++P+SL   T L ++  G+N
Sbjct: 538 NLIMRLPPSFSSLTSLRELDMSKNKFTNIPQSLLDLTGLTRLRCGHN 584



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/269 (36%), Positives = 141/269 (52%), Gaps = 6/269 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           +++  +P  IG L  +  LDLS N++  +P  +G ++SL+ LD   N+I+ LP  +  L 
Sbjct: 258 NSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALE 317

Query: 162 LSLVYLDLRGNQIS--ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            SL  L    N I+   LPV L  L  LE  DL SN LS LP SI  L SL    V +N 
Sbjct: 318 TSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNR 377

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-SSLSS 278
           L  +P  +    SL EL +  N L ++P  +G + +L  LS+  N    +PTTM   L +
Sbjct: 378 LTTIPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLSLDGNQFMSIPTTMIFQLFT 437

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L +L+   N L SV  S+   + L  +++ NN  +LR LPR +G    L+ L ++ N I 
Sbjct: 438 LEKLEAGDNRLRSVSPSISQLSCLTLLSLKNN--NLRVLPRELGRCTGLKTLSLNANDII 495

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +PD    L+RLR L + +N L   P  I
Sbjct: 496 AIPDQLCGLARLRRLTLDKNGLCFLPDTI 524



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/222 (36%), Positives = 117/222 (52%), Gaps = 6/222 (2%)

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           ++   P  I D+  L  +    N+I  LP  +  L  L+ L LG N L +LP SIG+L +
Sbjct: 2   KLTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTN 61

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL--PEAVGKIHTLEVLSVRYNNIK 267
           L+ + +E N L+E+P  I  C SLR + V +N L+ L  P  + ++  L+ L V +N I 
Sbjct: 62  LQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQID 121

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            +P TMS L++L+ LDVS N L S    L     LV +N   N A    LP  I  +  L
Sbjct: 122 SIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAAT--ELPVEIAKMTNL 179

Query: 328 EELDISNNQIRVLPD--SFRMLSRLRVLRVQENPLEVPPRNI 367
            EL +  NQIR +PD  +   L+ L VL ++ N +   P +I
Sbjct: 180 RELSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPGSI 221



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 48/306 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIV--------------------------AVPATIG 136
           + ++ LP  +G ++SL SLD S N+IV                           +P  +G
Sbjct: 281 NQLQELPREVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELG 340

Query: 137 GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
            L +L++ DL +N +  LP SI  L SLVY ++  N+++ +P  +  L  L EL L  N 
Sbjct: 341 NLRNLERFDLSSNLLSRLPSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNL 400

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHT-IGQCSSLRELRVDYNRLKALPEAVGKIHT 255
           L S+P  IGSL SL  L ++ N    +P T I Q  +L +L    NRL+++  ++ ++  
Sbjct: 401 LISMPPEIGSLSSLTTLSLDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSC 460

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN----- 310
           L +LS++ NN++ LP  +   + L+ L ++ N++ ++P+ LC    L ++ +  N     
Sbjct: 461 LTLLSLKNNNLRVLPRELGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFL 520

Query: 311 ------FADLRAL----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
                   +LR+L          P S  +L  L ELD+S N+   +P S   L+ L  LR
Sbjct: 521 PDTIGCLVNLRSLRFRDNLIMRLPPSFSSLTSLRELDMSKNKFTNIPQSLLDLTGLTRLR 580

Query: 355 VQENPL 360
              NP+
Sbjct: 581 CGHNPI 586



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 124/239 (51%), Gaps = 7/239 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVP--ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           LP  I K+++L  L +  N+I ++P  A +  L++L+ L L  N++  LP SI    +L 
Sbjct: 169 LPVEIAKMTNLRELSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLR 228

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LD   N +   P  +  L RL+ +D   N+L  +P  IG+L  ++ L +  N L+ELP 
Sbjct: 229 ELDCAYNSLVDTPPDIRELKRLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPR 288

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHT-LEVLSVRYNNIKQ--LPTTMSSLSSLREL 282
            +G  +SL+ L    N++  LP  +  + T L +LS   N I    LP  + +L +L   
Sbjct: 289 EVGFMTSLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERF 348

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           D+S N L  +P S+    +LV  N+ +N   L  +P  +  L+ L EL + +N +  +P
Sbjct: 349 DLSSNLLSRLPSSIKRLESLVYFNVNSN--RLTTIPPEVKGLKSLIELHLKDNLLISMP 405


>gi|71991525|ref|NP_001023850.1| Protein LET-413, isoform a [Caenorhabditis elegans]
 gi|7899272|emb|CAB91651.1| LET-413 protein [Caenorhabditis elegans]
 gi|351062134|emb|CCD70053.1| Protein LET-413, isoform a [Caenorhabditis elegans]
          Length = 679

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LPD++     L +L+LS N    +P TI   SS+  L L+   +  LP +IG L 
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+ R N +  +P+++  L +LEELDLG N L +LP  IG L SL++  V+ N L  
Sbjct: 152 NLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +I  C  L +L V  N++  LPE +G++  L  L++  N I +LP++   L  L+ L
Sbjct: 212 LPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQML 271

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
               N L ++   +    +L ++ +G NF  L  LP +IG+L  L  L++  N +  +PD
Sbjct: 272 KADRNSLHNLTSEIGKCQSLTELYLGQNF--LTDLPDTIGDLRQLTTLNVDCNNLSDIPD 329

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +      L VL +++N L   P  I
Sbjct: 330 TIGNCKSLTVLSLRQNILTELPMTI 354



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 130/254 (51%), Gaps = 25/254 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  +P SI +L  L  LDL +N + A+PA IG L+SL++  +  N +  LPDSI     L
Sbjct: 163 LRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRML 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LD+  NQI  LP  L R+  L +L++  N +  LP S G L  L+ L  + N L  L 
Sbjct: 223 DQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLT 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+C SL EL +  N L  LP+ +G +  L  L+V  NN+  +P T+ +  SL  L  
Sbjct: 283 SEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS- 341

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
                             ++ NI      L  LP +IG  E L  LD+++N++  LP + 
Sbjct: 342 ------------------LRQNI------LTELPMTIGKCENLTVLDVASNKLPHLPFTV 377

Query: 345 RMLSRLRVLRVQEN 358
           ++L +L+ L + EN
Sbjct: 378 KVLYKLQALWLSEN 391



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 107/191 (56%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++++  LPDSI     L  LD+SEN+I+ +P  +G + +L  L++  N IIELP S G+L
Sbjct: 206 INSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGEL 265

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L    N +  L   + +   L EL LG N L+ LPD+IG L  L  L V+ N+L 
Sbjct: 266 KRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLS 325

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ++P TIG C SL  L +  N L  LP  +GK   L VL V  N +  LP T+  L  L+ 
Sbjct: 326 DIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQA 385

Query: 282 LDVSFNELESV 292
           L +S N+ +S+
Sbjct: 386 LWLSENQTQSI 396



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 136/258 (52%), Gaps = 2/258 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ +P  I +   L  L+L+ N I  +   +  L  L+ LD+  N +  LP  IG+L  
Sbjct: 24  NLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQ 83

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+ L+L  N I+ LP  +     L  L+L SN  + LP++I    S+  L +    L  L
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG  ++LR L    N L+ +P ++ ++  LE L +  N ++ LP  +  L+SLRE  
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N L S+P+S+     L ++++  N   +  LP ++G +  L +L+IS N+I  LP S
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSEN--QIIRLPENLGRMPNLTDLNISINEIIELPSS 261

Query: 344 FRMLSRLRVLRVQENPLE 361
           F  L RL++L+   N L 
Sbjct: 262 FGELKRLQMLKADRNSLH 279



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 26/176 (14%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DLN+    ++ I  LP S G+L  L  L    N +  + + IG   SL +L L  N + +
Sbjct: 247 DLNIS---INEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTD 303

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPD+IGDL  L                         L++  NNLS +PD+IG+  SL  L
Sbjct: 304 LPDTIGDLRQLTT-----------------------LNVDCNNLSDIPDTIGNCKSLTVL 340

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
            +  N L ELP TIG+C +L  L V  N+L  LP  V  ++ L+ L +  N  + +
Sbjct: 341 SLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 60/134 (44%), Gaps = 25/134 (18%)

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L+A+P  + +   LE L++  NNIK+L   + SL  LR LDVS NEL             
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELA------------ 72

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
                         LP  IGNL  L EL+++ N I  LPD+ +    L  L +  NP   
Sbjct: 73  -------------VLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTR 119

Query: 363 PPRNIVEMGAQAVV 376
            P  I E  +  ++
Sbjct: 120 LPETICECSSITIL 133



 Score = 45.4 bits (106), Expect = 0.056,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L   N   +N+  +PD+IG   SL  L L +N +  +P TIG   +L  LD+ +N++ 
Sbjct: 312 RQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLP 371

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL 177
            LP ++  L  L  L L  NQ  ++
Sbjct: 372 HLPFTVKVLYKLQALWLSENQTQSI 396


>gi|350426146|ref|XP_003494347.1| PREDICTED: protein lap1-like isoform 1 [Bombus impatiens]
 gi|350426149|ref|XP_003494348.1| PREDICTED: protein lap1-like isoform 2 [Bombus impatiens]
          Length = 1040

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 142/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    +L+ +D+  N     PD+I 
Sbjct: 71  LSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L+ L+L  NNL +LP S+  LI+L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  +P+ +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             + +S NE+  +P+SLC+  T+V + + +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDN--QLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L V  N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNVDNNYLRCLPPEI 336



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 156/268 (58%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALKTLELRENNLMTLPKSMSRLINLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +P+ +++L RL   D   N +  +P  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ +LP ++    ++  L+VD N+L ALP  +G++ +LE L V  N ++ LP
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+V  N L  +P  +   T L  +++ +N  +L  +P  +G+L  L+ L
Sbjct: 311 SSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSN--NLTRVPPELGHLSSLKVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 144/264 (54%), Gaps = 3/264 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  +L S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRL+ L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALKTLELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q   L       N +  +P  V     + ++ +  N I QLP ++  L ++  L
Sbjct: 217 VPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTL 276

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L ++P  +   ++L ++ +  NF  L  LP SIG L  L  L++ NN +R LP 
Sbjct: 277 KVDDNQLNALPNDIGQMSSLEELIVTKNF--LEYLPSSIGLLRKLHCLNVDNNYLRCLPP 334

Query: 343 SFRMLSRLRVLRVQENPL-EVPPR 365
                + L +L ++ N L  VPP 
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPPE 358



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 128/256 (50%), Gaps = 25/256 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+++ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    +L+ + +  N  E  P  I     LREL ++   ++ LP   G++  L+ L
Sbjct: 102 LPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALKTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNLMTLPKSMSRLINLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRVPL 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           +I  L  L   D                       +S+N+I  LPDS   L  +  L+V 
Sbjct: 220 NINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVD 279

Query: 357 ENPLEVPPRNIVEMGA 372
           +N L   P +I +M +
Sbjct: 280 DNQLNALPNDIGQMSS 295



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 108/186 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P+ + G   +  + L +N I +LPDS+  L 
Sbjct: 212 NDIRRVPLNINQLYRLNHFDCTMNAIHIIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L V+ N L  
Sbjct: 272 TIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNVDNNYLRC 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  +G + +L+VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLKVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/160 (34%), Positives = 92/160 (57%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +G RD+++ +   + I  LPDS+  L ++V+L + +N++ A+P  IG +SSL++L +
Sbjct: 242 SEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIV 301

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  L++  N +  LP  +     L  L L SNNL+ +P  +G 
Sbjct: 302 TKNFLEYLPSSIGLLRKLHCLNVDNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGH 361

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L SLK L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 362 LSSLKVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  138 bits (348), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/290 (30%), Positives = 169/290 (58%), Gaps = 5/290 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P  +G L +L++L++  N++  LP+ I +L 
Sbjct: 100 NKLQTLSDDLRLLPALTVLDVHDNQLASLPCAVGELENLQRLNVSHNKLKILPEEIKNLR 159

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L+ LEELD+ +N+LSS+P S  +L +L +L +  N L+ 
Sbjct: 160 NLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARNQLKS 219

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L++L    N L+ +P  +  + +LE+L +R N ++ +P       SL+EL
Sbjct: 220 LPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLRRNKLRSIP-EFPFCRSLKEL 278

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L   +++  +++ +N   L+++P  I  L+ LE LD++NN I  LP
Sbjct: 279 HVGENQIEVIGAEHLKHLSSINVLDLRDN--KLKSIPDEITLLQALERLDLTNNDISSLP 336

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            +   L  L+ L ++ NP+    R+++  G Q +++Y+   + K DA  Q
Sbjct: 337 YALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKI-KDDAPPQ 385



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/232 (29%), Positives = 120/232 (51%), Gaps = 3/232 (1%)

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           VP T+  ++     + + N      D   +   L  L L  N++  L   L  L  L  L
Sbjct: 59  VPQTVWRINLDTPEEANQNLSFGAADRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVL 118

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           D+  N L+SLP ++G L +L++L V  N L+ LP  I    +L+ L +  N L  +PE  
Sbjct: 119 DVHDNQLASLPCAVGELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGF 178

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G++  LE L +  N++  +P + S+L++L  L+++ N+L+S+P  +     L +++   N
Sbjct: 179 GQLLNLEELDISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCN 238

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
              L  +P  + ++E LE L +  N++R +P+ F     L+ L V EN +EV
Sbjct: 239 L--LETIPSELASMESLELLYLRRNKLRSIPE-FPFCRSLKELHVGENQIEV 287



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 78/322 (24%), Positives = 144/322 (44%), Gaps = 50/322 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  LSS+  LDL +N++ ++P  I  L +L++LDL  N I  LP ++G+L  L +L L
Sbjct: 291 EHLKHLSSINVLDLRDNKLKSIPDEITLLQALERLDLTNNDISSLPYALGNLPHLKFLAL 350

Query: 170 RGNQISA---------------------------------------LP----VALSRLVR 186
            GN +                                         LP    V +  +V 
Sbjct: 351 EGNPMRTIRRDLLTKGTQELMKYLRSKIKDDAPPQNETTTTGTAMTLPSESRVNVHAIVT 410

Query: 187 LEELDLGSNNLSSLPDSIGSLI---SLKKLIVETNDLEELPHTIGQCS-SLRELRVDYNR 242
           L+ L+      +++PD +   +   ++  +    N L E+P  I +   ++ ++ + +N+
Sbjct: 411 LKILEYSEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKETVSDVNLSFNK 470

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL-CFATT 301
           L  +   +  +  L  L +R N +  LP  MS+L  L+ +++SFN  ++ P+ L C  T 
Sbjct: 471 LSLISLEISVLQKLTHLDIRNNLLTALPDEMSALKKLQTINLSFNRFKTFPDVLYCIPTL 530

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
              +   N    + AL   +  ++ L  LD+ NN +  +P        LR L ++ NP  
Sbjct: 531 ETILFSNNQVGSVDAL--RMKKMDKLATLDLQNNDLLQVPPELGNCMTLRTLLLEGNPFR 588

Query: 362 VPPRNIVEMGAQAVVQYMADLV 383
           +P   I+  G  AV++Y+ D +
Sbjct: 589 IPRAAILAKGTAAVLEYLRDRI 610


>gi|93005765|ref|YP_580202.1| hypothetical protein Pcryo_0937 [Psychrobacter cryohalolentis K5]
 gi|92393443|gb|ABE74718.1| Leucine-rich repeat, typical subtype [Psychrobacter cryohalolentis
           K5]
          Length = 757

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/257 (36%), Positives = 152/257 (59%), Gaps = 9/257 (3%)

Query: 108 LPDSIGKLSSLVSLDLSEN-RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LP+SIG+LS L  L +S N ++  +P ++G L +L++L L  N + +LPDS G L +L+Y
Sbjct: 77  LPNSIGELSKLKQLVISSNDKLTELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIY 136

Query: 167 LDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE---E 222
           L + GN  ++ LP +L  L  LE L LG   ++ LP+SIG L  LK L +E  DLE   +
Sbjct: 137 LTINGNYNLTELPESLGGLENLESLTLGYMGITKLPESIGQLSKLKYLTIE--DLENIID 194

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY-NNIKQLPTTMSSLSSLRE 281
           LP +I    +L  L ++ +  K LPE++G++  L  L++ Y NNI + P ++ +L+ L  
Sbjct: 195 LPESIKDLGNLESLTLENSGFKKLPESIGQLLNLTNLTINYNNNITEFPESIGNLNILEY 254

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N ++ +P+S+    +L ++NI  N      +P SIGNL+ LE L +    I+ LP
Sbjct: 255 LSLGGNSVKKLPDSIGKLFSLRELNIS-NIEKSIDIPESIGNLKNLESLSLGYINIKKLP 313

Query: 342 DSFRMLSRLRVLRVQEN 358
           ++   LS L  L + +N
Sbjct: 314 ENIFQLSSLLSLTIVDN 330



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/274 (32%), Positives = 155/274 (56%), Gaps = 7/274 (2%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL-HANRIIELPDSIGD 160
           ++NI  LP+SI  L +L SL L  +    +P +IG L +L  L + + N I E P+SIG+
Sbjct: 189 LENIIDLPESIKDLGNLESLTLENSGFKKLPESIGQLLNLTNLTINYNNNITEFPESIGN 248

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS-SLPDSIGSLISLKKLIVETND 219
           L  L YL L GN +  LP ++ +L  L EL++ +   S  +P+SIG+L +L+ L +   +
Sbjct: 249 LNILEYLSLGGNSVKKLPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLSLGYIN 308

Query: 220 LEELPHTIGQCSSLRELR-VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           +++LP  I Q SSL  L  VD  +L  + E + K+  LE L ++ NN K+LP+++  LS 
Sbjct: 309 IKKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLETLYLKGNNFKKLPSSIGQLSK 368

Query: 279 LRELDVSF-NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
           L +L + +  ++  +P+SL     L  + +     +++ LP ++ +L  L  L I++N +
Sbjct: 369 LIDLSIEYTGKITEIPDSLVELNNLQNLTLCG--MEIKKLPENMSHLSCLTNLTITHNRK 426

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +   P+S   +  L +L + EN L+    +I +M
Sbjct: 427 LTEFPESVAGIKNLEILSLNENSLKTLSESINKM 460



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 157/279 (56%), Gaps = 7/279 (2%)

Query: 96  NLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL-HANRIIEL 154
           NL     +NI   P+SIG L+ L  L L  N +  +P +IG L SL++L++ +  + I++
Sbjct: 230 NLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKLPDSIGKLFSLRELNISNIEKSIDI 289

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN-NLSSLPDSIGSLISLKKL 213
           P+SIG+L +L  L L    I  LP  + +L  L  L +  N  L+ + ++I  L +L+ L
Sbjct: 290 PESIGNLKNLESLSLGYINIKKLPENIFQLSSLLSLTIVDNMKLTEISENINKLKNLETL 349

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDY-NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
            ++ N+ ++LP +IGQ S L +L ++Y  ++  +P+++ +++ L+ L++    IK+LP  
Sbjct: 350 YLKGNNFKKLPSSIGQLSKLIDLSIEYTGKITEIPDSLVELNNLQNLTLCGMEIKKLPEN 409

Query: 273 MSSLSSLRELDVSFN-ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           MS LS L  L ++ N +L   PES+     L  +++  N   L+ L  SI  +E L+ L 
Sbjct: 410 MSHLSCLTNLTITHNRKLTEFPESVAGIKNLEILSLNEN--SLKTLSESINKMENLKYLY 467

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +++N ++ LPD    L +L  L +  N L   P +I+ M
Sbjct: 468 LASNSLKSLPD-LSNLIKLEYLELDNNKLNSLPESIIGM 505



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 152/305 (49%), Gaps = 52/305 (17%)

Query: 108 LPDSIGKLSSLVSLDLS-ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LP+SIG+L +L +L ++  N I   P +IG L+ L+ L L  N + +LPDSIG L SL  
Sbjct: 218 LPESIGQLLNLTNLTINYNNNITEFPESIGNLNILEYLSLGGNSVKKLPDSIGKLFSLRE 277

Query: 167 LDLRGNQIS-ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL--------------- 210
           L++   + S  +P ++  L  LE L LG  N+  LP++I  L SL               
Sbjct: 278 LNISNIEKSIDIPESIGNLKNLESLSLGYINIKKLPENIFQLSSLLSLTIVDNMKLTEIS 337

Query: 211 ---------KKLIVETNDLEELPHTIGQCSSLRELRVDY-NRLKALPEAVGKIHTLEVLS 260
                    + L ++ N+ ++LP +IGQ S L +L ++Y  ++  +P+++ +++ L+ L+
Sbjct: 338 ENINKLKNLETLYLKGNNFKKLPSSIGQLSKLIDLSIEYTGKITEIPDSLVELNNLQNLT 397

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFN-ELESVPESLCFATTLVKMNIGNNFADLRALPR 319
           +    IK+LP  MS LS L  L ++ N +L   PES+     L  +++  N   L+ L  
Sbjct: 398 LCGMEIKKLPENMSHLSCLTNLTITHNRKLTEFPESVAGIKNLEILSLNEN--SLKTLSE 455

Query: 320 SIGNLE----------------------MLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
           SI  +E                       LE L++ NN++  LP+S   +  L  + V  
Sbjct: 456 SINKMENLKYLYLASNSLKSLPDLSNLIKLEYLELDNNKLNSLPESIIGMENLESMSVYG 515

Query: 358 NPLEV 362
           NPL+ 
Sbjct: 516 NPLKA 520



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 145/275 (52%), Gaps = 32/275 (11%)

Query: 108 LPDSIGKLSSLVSLDLSE-NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPDSIGKL SL  L++S   + + +P +IG L +L+ L L    I +LP++I  L SL+ 
Sbjct: 265 LPDSIGKLFSLRELNISNIEKSIDIPESIGNLKNLESLSLGYINIKKLPENIFQLSSLLS 324

Query: 167 LDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL------------ 213
           L +  N +++ +   +++L  LE L L  NN   LP SIG L  L  L            
Sbjct: 325 LTIVDNMKLTEISENINKLKNLETLYLKGNNFKKLPSSIGQLSKLIDLSIEYTGKITEIP 384

Query: 214 --IVETNDLE----------ELPHTIGQCSSLRELRVDYNR-LKALPEAVGKIHTLEVLS 260
             +VE N+L+          +LP  +   S L  L + +NR L   PE+V  I  LE+LS
Sbjct: 385 DSLVELNNLQNLTLCGMEIKKLPENMSHLSCLTNLTITHNRKLTEFPESVAGIKNLEILS 444

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N++K L  +++ + +L+ L ++ N L+S+P+ L     L  + + NN   L +LP S
Sbjct: 445 LNENSLKTLSESINKMENLKYLYLASNSLKSLPD-LSNLIKLEYLELDNN--KLNSLPES 501

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           I  +E LE + +  N ++ +  S  +LS L+ L V
Sbjct: 502 IIGMENLESMSVYGNPLKAI--SKPVLSFLKNLDV 534



 Score = 91.3 bits (225), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 65/198 (32%), Positives = 116/198 (58%), Gaps = 6/198 (3%)

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           +P    +L++LE L++  N+ +S++P+SIG+L SL    +E + +++LP++IG+ S L++
Sbjct: 30  IPRKPKKLIKLEVLEISYNDEISTIPESIGNLKSLVTFALEGSKVKKLPNSIGELSKLKQ 89

Query: 236 LRVDYN-RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN-ELESVP 293
           L +  N +L  LP+++G +  LE L +R N +K+LP +   LS+L  L ++ N  L  +P
Sbjct: 90  LVISSNDKLTELPKSMGNLENLEELQLRGNGLKKLPDSFGQLSNLIYLTINGNYNLTELP 149

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN-NQIRVLPDSFRMLSRLRV 352
           ESL     L  + +G  +  +  LP SIG L  L+ L I +   I  LP+S + L  L  
Sbjct: 150 ESLGGLENLESLTLG--YMGITKLPESIGQLSKLKYLTIEDLENIIDLPESIKDLGNLES 207

Query: 353 LRVQENPLEVPPRNIVEM 370
           L ++ +  +  P +I ++
Sbjct: 208 LTLENSGFKKLPESIGQL 225



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 66/116 (56%), Gaps = 3/116 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P+S+  + +L  L L+EN +  +  +I  + +LK L L +N +  LPD + +L+ L YL
Sbjct: 430 FPESVAGIKNLEILSLNENSLKTLSESINKMENLKYLYLASNSLKSLPD-LSNLIKLEYL 488

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           +L  N++++LP ++  +  LE + +  N L ++   + S   LK L V  + ++E+
Sbjct: 489 ELDNNKLNSLPESIIGMENLESMSVYGNPLKAISKPVLSF--LKNLDVYVDGVDEV 542


>gi|395530455|ref|XP_003767310.1| PREDICTED: leucine-rich repeat-containing protein 7 [Sarcophilus
           harrisii]
          Length = 1442

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    L++L  L
Sbjct: 91  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQL 150

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 151 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 210

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 211 EQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSN 270

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 271 MLQQLPDSIGLLKKLTTLKVDDN--QLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYL 328

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 329 HSLRTLAVDENFLPELPREI 348



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 117/195 (60%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 215 NLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQ 274

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP A+  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 275 LPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 334

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 335 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 394

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 395 TKLKELAALWLSDNQ 409



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 134 ISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 193

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L +LP SIG L  L  L +  N +E + 
Sbjct: 194 ERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVD 253

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP  + +LS L E D 
Sbjct: 254 LEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDC 313

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 314 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 371

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 372 GQMQKLRVLNLSDNRLK 388



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 178 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLK 237

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 238 MLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTV 297

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 298 LPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 357

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 358 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 140/254 (55%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L  L  L+L EN +  +P ++  L+ L++LDL  N   ELP+ +  + +L
Sbjct: 157 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNL 216

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N +  LP ++ +L  L  LD+  N + ++   I    +L+ L++ +N L++LP
Sbjct: 217 RELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLP 276

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP A+G +  LE      N ++ LP+T+  L SLR L V
Sbjct: 277 DSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAV 336

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  M++ +N   L  LP  IG ++ L  L++S+N+++ LP SF
Sbjct: 337 DENFLPELPREIGSCKNVTVMSLRSN--KLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 394

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 395 TKLKELAALWLSDN 408



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 55  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 114

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 115 PENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILE 174

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+  P +
Sbjct: 175 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGS 232

Query: 367 IVEM 370
           I ++
Sbjct: 233 IGKL 236


>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
 gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
          Length = 287

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/278 (31%), Positives = 150/278 (53%), Gaps = 28/278 (10%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE + K    DL+L    +  +   P+S+ +L++L  L+L  NRI  VP +I  L++L  
Sbjct: 14  IETAQKTEATDLDLSGLALTEV---PESVAQLTNLTRLELDHNRITEVPESIAQLTNLTT 70

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L L  NRI E+ ++I  L +L  L L+ NQI+ +P A+++L  L  L+L  N L+     
Sbjct: 71  LYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQLT----- 125

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
                             E+   I Q ++L  L + YN+L  +PEA+ K+  L  L +  
Sbjct: 126 ------------------EISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGR 167

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N++ ++P  +S L++L EL +  N++  VP+++   T L  +++ NN   +  +P +I  
Sbjct: 168 NHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNN--QITEIPEAIAQ 225

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  LE LD+S NQ+  +P+S   L+ L +L + +NPL+
Sbjct: 226 LTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNPLD 263



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/216 (30%), Positives = 119/216 (55%), Gaps = 23/216 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIV-----------------------AVPATIGGLS 139
           + I  +P+SI +L++L +L LSENRI                         +P  I  L+
Sbjct: 53  NRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLT 112

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L  L+L  N++ E+ ++I  L +L  L L  NQ++ +P A+++L +L  L LG N+L+ 
Sbjct: 113 NLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNHLTE 172

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P  I  L +L +L++  N + ++P  I Q ++L+ L +  N++  +PEA+ ++  LE L
Sbjct: 173 IPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQLTNLETL 232

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
            + YN +  +P ++S L++L  L +  N L+ +  S
Sbjct: 233 DLSYNQLTTIPESISQLTNLVILSLYQNPLDPIVHS 268



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 110/224 (49%), Gaps = 25/224 (11%)

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
           +  QI+   +  ++     +LDL    L+ +P+S+  L +L +L ++ N + E+P +I Q
Sbjct: 5   KAYQIAKERIETAQKTEATDLDLSGLALTEVPESVAQLTNLTRLELDHNRITEVPESIAQ 64

Query: 230 CSSLRELRVDYNRLK-----------------------ALPEAVGKIHTLEVLSVRYNNI 266
            ++L  L +  NR+                         +PEA+ ++  L  L++ +N +
Sbjct: 65  LTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIAKIPEAIAQLTNLTTLNLSHNQL 124

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
            ++   ++ L++L  L +S+N+L  +PE++   T L  + +G N   L  +P+ I  L  
Sbjct: 125 TEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLTSLRLGRNH--LTEIPKEISQLAN 182

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L EL +  NQI  +P +   L+ L++L +  N +   P  I ++
Sbjct: 183 LTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPEAIAQL 226


>gi|327282312|ref|XP_003225887.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Anolis
           carolinensis]
          Length = 1454

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 141/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N I   P  I     L  ++   N I +LPD    LL
Sbjct: 79  NDLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQLL 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 139 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSE 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +L+EL +D N L+ LP  +G++  L  L V  N I+ +   +S   +L +L
Sbjct: 199 LPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 259 LLSSNMLQQLPDSIGLLKRLTTLKVDDN--QLTVLPNAIGNLSLLEEFDCSCNELESLPP 316

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 317 TIGYLHSLRTLAVDENFLPELPREI 341



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L+EL + +N L +LP  IG L  L  L V  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESID 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP  + +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LPD  
Sbjct: 307 SCNELESLPPTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPDEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 117/195 (60%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP  IG+L  LV LD+S+NRI ++   I G  +L+ L L +N + +
Sbjct: 208 NLKELWMDNNALQTLPGPIGRLKQLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP A+  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKRLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LP+ +G++  L VL++  N +K LP T 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPITF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +LK+L +  N +  LP  IG L 
Sbjct: 171 NHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLPGPIGRLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I ++ + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 QLVYLDVSKNRIESIDMDISGCEALEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTV 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNAIGNLSLLEEFDCSCNELESLPPTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +P+ +     L  +N+ +N   L+ LP +   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPDEIGQMQKLRVLNLSDN--RLKNLPITFTKLKELAALWLSDNQSKAL 406



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 90/178 (50%), Gaps = 2/178 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP +I    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTSIASLVNLKELDISKNGIQDF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  L+ L +  N L+  P
Sbjct: 168 LRENH--LKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNALQTLP 223



 Score = 52.8 bits (125), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/121 (29%), Positives = 66/121 (54%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + +   +L EL +  N++E +P+ L     L K++I +
Sbjct: 19  GEEEIVSVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL +LP SI +L  L+ELDIS N I+  P++ +    L ++    NP+   P    +
Sbjct: 79  N--DLSSLPTSIASLVNLKELDISKNGIQDFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 370 M 370
           +
Sbjct: 137 L 137


>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
 gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
          Length = 925

 Score =  138 bits (348), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/346 (28%), Positives = 176/346 (50%), Gaps = 61/346 (17%)

Query: 79  KLASLIEVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +L +LIE ++ KG R+L+L  NKL      +P++I KL++L  L L  N+I  +P  I  
Sbjct: 5   ELLALIEQAAAKGWRELDLSGNKLTK----IPEAIAKLTNLTGLYLHNNKITEIPQVIAN 60

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ-----------------------I 174
           L++L +L+L  N+I E+P++I  L +L  L L  NQ                       I
Sbjct: 61  LTNLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQI 120

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           S +P  +++L  L +LDL +N ++ +P++I  L +L++L +  N + E+P  I Q ++LR
Sbjct: 121 SEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLR 180

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +  N++  +PEA+ ++  L  L +  N I ++P  ++ L++LR+LD+  N++  +PE
Sbjct: 181 LLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPE 240

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP-------DSFRML 347
           +L   T                          L +LD+SNNQI  +P       ++ ++L
Sbjct: 241 ALVKLTN-------------------------LRQLDLSNNQITEIPLEILDSKETKKIL 275

Query: 348 SRLRVLRVQEN-PLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
           + LR +R  +  PL      +V  G+      +  L+  +  K QP
Sbjct: 276 NYLRQIRTSKTRPLHEAKLLLVGQGSVGKTSLIERLIRDKYDKNQP 321


>gi|71991531|ref|NP_001023851.1| Protein LET-413, isoform b [Caenorhabditis elegans]
 gi|76803776|sp|O61967.3|LAP1_CAEEL RecName: Full=Protein lap1; AltName: Full=Lethal protein 413
 gi|351062135|emb|CCD70054.1| Protein LET-413, isoform b [Caenorhabditis elegans]
          Length = 699

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 91/265 (34%), Positives = 144/265 (54%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LPD++     L +L+LS N    +P TI   SS+  L L+   +  LP +IG L 
Sbjct: 92  NSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLLPSNIGSLT 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+ R N +  +P+++  L +LEELDLG N L +LP  IG L SL++  V+ N L  
Sbjct: 152 NLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +I  C  L +L V  N++  LPE +G++  L  L++  N I +LP++   L  L+ L
Sbjct: 212 LPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQML 271

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
               N L ++   +    +L ++ +G NF  L  LP +IG+L  L  L++  N +  +PD
Sbjct: 272 KADRNSLHNLTSEIGKCQSLTELYLGQNF--LTDLPDTIGDLRQLTTLNVDCNNLSDIPD 329

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +      L VL +++N L   P  I
Sbjct: 330 TIGNCKSLTVLSLRQNILTELPMTI 354



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 130/254 (51%), Gaps = 25/254 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  +P SI +L  L  LDL +N + A+PA IG L+SL++  +  N +  LPDSI     L
Sbjct: 163 LRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFYVDINSLTSLPDSISGCRML 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LD+  NQI  LP  L R+  L +L++  N +  LP S G L  L+ L  + N L  L 
Sbjct: 223 DQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGELKRLQMLKADRNSLHNLT 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+C SL EL +  N L  LP+ +G +  L  L+V  NN+  +P T+ +  SL  L  
Sbjct: 283 SEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLSDIPDTIGNCKSLTVLS- 341

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
                             ++ NI      L  LP +IG  E L  LD+++N++  LP + 
Sbjct: 342 ------------------LRQNI------LTELPMTIGKCENLTVLDVASNKLPHLPFTV 377

Query: 345 RMLSRLRVLRVQEN 358
           ++L +L+ L + EN
Sbjct: 378 KVLYKLQALWLSEN 391



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 107/191 (56%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++++  LPDSI     L  LD+SEN+I+ +P  +G + +L  L++  N IIELP S G+L
Sbjct: 206 INSLTSLPDSISGCRMLDQLDVSENQIIRLPENLGRMPNLTDLNISINEIIELPSSFGEL 265

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L    N +  L   + +   L EL LG N L+ LPD+IG L  L  L V+ N+L 
Sbjct: 266 KRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTDLPDTIGDLRQLTTLNVDCNNLS 325

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ++P TIG C SL  L +  N L  LP  +GK   L VL V  N +  LP T+  L  L+ 
Sbjct: 326 DIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQA 385

Query: 282 LDVSFNELESV 292
           L +S N+ +S+
Sbjct: 386 LWLSENQTQSI 396



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 136/258 (52%), Gaps = 2/258 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ +P  I +   L  L+L+ N I  +   +  L  L+ LD+  N +  LP  IG+L  
Sbjct: 24  NLQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELAVLPAEIGNLTQ 83

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+ L+L  N I+ LP  +     L  L+L SN  + LP++I    S+  L +    L  L
Sbjct: 84  LIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTRLPETICECSSITILSLNETSLTLL 143

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG  ++LR L    N L+ +P ++ ++  LE L +  N ++ LP  +  L+SLRE  
Sbjct: 144 PSNIGSLTNLRVLEARDNLLRTIPLSIVELRKLEELDLGQNELEALPAEIGKLTSLREFY 203

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N L S+P+S+     L ++++  N   +  LP ++G +  L +L+IS N+I  LP S
Sbjct: 204 VDINSLTSLPDSISGCRMLDQLDVSEN--QIIRLPENLGRMPNLTDLNISINEIIELPSS 261

Query: 344 FRMLSRLRVLRVQENPLE 361
           F  L RL++L+   N L 
Sbjct: 262 FGELKRLQMLKADRNSLH 279



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 85/176 (48%), Gaps = 26/176 (14%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DLN+    ++ I  LP S G+L  L  L    N +  + + IG   SL +L L  N + +
Sbjct: 247 DLNIS---INEIIELPSSFGELKRLQMLKADRNSLHNLTSEIGKCQSLTELYLGQNFLTD 303

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPD+IGDL  L                         L++  NNLS +PD+IG+  SL  L
Sbjct: 304 LPDTIGDLRQLTT-----------------------LNVDCNNLSDIPDTIGNCKSLTVL 340

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
            +  N L ELP TIG+C +L  L V  N+L  LP  V  ++ L+ L +  N  + +
Sbjct: 341 SLRQNILTELPMTIGKCENLTVLDVASNKLPHLPFTVKVLYKLQALWLSENQTQSI 396



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 57/127 (44%), Gaps = 25/127 (19%)

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L+A+P  + +   LE L++  NNIK+L   + SL  LR LDVS NEL             
Sbjct: 25  LQAIPSDIFRFRKLEDLNLTMNNIKELDHRLFSLRHLRILDVSDNELA------------ 72

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
                         LP  IGNL  L EL+++ N I  LPD+ +    L  L +  NP   
Sbjct: 73  -------------VLPAEIGNLTQLIELNLNRNSIAKLPDTMQNCKLLTTLNLSSNPFTR 119

Query: 363 PPRNIVE 369
            P  I E
Sbjct: 120 LPETICE 126



 Score = 45.1 bits (105), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 29/85 (34%), Positives = 45/85 (52%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L   N   +N+  +PD+IG   SL  L L +N +  +P TIG   +L  LD+ +N++ 
Sbjct: 312 RQLTTLNVDCNNLSDIPDTIGNCKSLTVLSLRQNILTELPMTIGKCENLTVLDVASNKLP 371

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL 177
            LP ++  L  L  L L  NQ  ++
Sbjct: 372 HLPFTVKVLYKLQALWLSENQTQSI 396


>gi|405972453|gb|EKC37220.1| Leucine-rich repeat-containing protein 7 [Crassostrea gigas]
          Length = 1283

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 141/254 (55%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP + G+L  L  L++ EN +  +P +   L++L++LD+  N   ELPD IG+L SL
Sbjct: 145 LDYLPGTFGRLLKLKVLEIRENHLKTLPKSFSMLTALERLDIGHNEFTELPDVIGNLTSL 204

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + L    NQIS +   +  L RL  LD  SN+L SLP  I    SL  L + TN ++ LP
Sbjct: 205 LELWCDHNQISTITPTIGNLKRLMFLDASSNHLQSLPSEIEGCTSLGDLHLTTNRIQALP 264

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G   SL  L+ D N+L +LP  +G + +L  L+V  NN++ LP T+  L +LR    
Sbjct: 265 ETLGNLESLTTLKADNNQLTSLPSTIGGLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYA 324

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  L     +  +++ +N   L  +P  IG +  L  L++S+N++R LP + 
Sbjct: 325 DENYLLFIPAELGSCNGITVLSLRSNR--LEYIPDEIGRIPRLRVLNLSDNRLRYLPFTI 382

Query: 345 RMLSRLRVLRVQEN 358
             L  L+ L + EN
Sbjct: 383 TKLKDLQALWLAEN 396



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 157/327 (48%), Gaps = 51/327 (15%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            G R L L N  + NI   P +IG L +L  LD+S+N I+ +P  I     L+ ++ + N
Sbjct: 64  HGIRKLCLSNNEVTNI---PPAIGSLINLEELDVSKNGIIDIPENINCCKCLRSVNANVN 120

Query: 150 RIIELPD-----------------------SIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            + +LP+                       + G LL L  L++R N +  LP + S L  
Sbjct: 121 PLGKLPEGLTQLGNLTQLYLNDTFLDYLPGTFGRLLKLKVLEIRENHLKTLPKSFSMLTA 180

Query: 187 LEELDLGSNNLSSLPDSIGSLISL--------------------KKLI---VETNDLEEL 223
           LE LD+G N  + LPD IG+L SL                    K+L+     +N L+ L
Sbjct: 181 LERLDIGHNEFTELPDVIGNLTSLLELWCDHNQISTITPTIGNLKRLMFLDASSNHLQSL 240

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  I  C+SL +L +  NR++ALPE +G + +L  L    N +  LP+T+  L SL EL+
Sbjct: 241 PSEIEGCTSLGDLHLTTNRIQALPETLGNLESLTTLKADNNQLTSLPSTIGGLQSLSELN 300

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           VS N LE +P +L     L       N+  L  +P  +G+   +  L + +N++  +PD 
Sbjct: 301 VSCNNLEDLPVTLGLLRNLRTFYADENY--LLFIPAELGSCNGITVLSLRSNRLEYIPDE 358

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEM 370
              + RLRVL + +N L   P  I ++
Sbjct: 359 IGRIPRLRVLNLSDNRLRYLPFTITKL 385



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 89/286 (31%), Positives = 146/286 (51%), Gaps = 4/286 (1%)

Query: 78  IKLASLIEVSSKKGTRDLNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
            +  +L +V ++    +  L+   +DN  I+ LP  +     +  L LS N +  +P  I
Sbjct: 24  YRHCNLTDVPAQVFNFERTLEELYLDNNQIQDLPRELFCCHGIRKLCLSNNEVTNIPPAI 83

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           G L +L++LD+  N II++P++I     L  ++   N +  LP  L++L  L +L L   
Sbjct: 84  GSLINLEELDVSKNGIIDIPENINCCKCLRSVNANVNPLGKLPEGLTQLGNLTQLYLNDT 143

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L  LP + G L+ LK L +  N L+ LP +    ++L  L + +N    LP+ +G + +
Sbjct: 144 FLDYLPGTFGRLLKLKVLEIRENHLKTLPKSFSMLTALERLDIGHNEFTELPDVIGNLTS 203

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L   +N I  +  T+ +L  L  LD S N L+S+P  +   T+L  +++  N   ++
Sbjct: 204 LLELWCDHNQISTITPTIGNLKRLMFLDASSNHLQSLPSEIEGCTSLGDLHLTTNR--IQ 261

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           ALP ++GNLE L  L   NNQ+  LP +   L  L  L V  N LE
Sbjct: 262 ALPETLGNLESLTTLKADNNQLTSLPSTIGGLQSLSELNVSCNNLE 307



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 109/187 (58%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I  +  +IG L  L+ LD S N + ++P+ I G +SL  L L  NRI  LP+++G+L
Sbjct: 211 HNQISTITPTIGNLKRLMFLDASSNHLQSLPSEIEGCTSLGDLHLTTNRIQALPETLGNL 270

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL  L    NQ+++LP  +  L  L EL++  NNL  LP ++G L +L+    + N L 
Sbjct: 271 ESLTTLKADNNQLTSLPSTIGGLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYADENYLL 330

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            +P  +G C+ +  L +  NRL+ +P+ +G+I  L VL++  N ++ LP T++ L  L+ 
Sbjct: 331 FIPAELGSCNGITVLSLRSNRLEYIPDEIGRIPRLRVLNLSDNRLRYLPFTITKLKDLQA 390

Query: 282 LDVSFNE 288
           L ++ N+
Sbjct: 391 LWLAENQ 397



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/166 (33%), Positives = 86/166 (51%), Gaps = 5/166 (3%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           D     L  L S IE  +  G  DL+L     + I+ LP+++G L SL +L    N++ +
Sbjct: 231 DASSNHLQSLPSEIEGCTSLG--DLHL---TTNRIQALPETLGNLESLTTLKADNNQLTS 285

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +P+TIGGL SL +L++  N + +LP ++G L +L       N +  +P  L     +  L
Sbjct: 286 LPSTIGGLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYADENYLLFIPAELGSCNGITVL 345

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
            L SN L  +PD IG +  L+ L +  N L  LP TI +   L+ L
Sbjct: 346 SLRSNRLEYIPDEIGRIPRLRVLNLSDNRLRYLPFTITKLKDLQAL 391



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 60/110 (54%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G + L+  N   +N+E LP ++G L +L +    EN ++ +PA +G  + +  L L +NR
Sbjct: 292 GLQSLSELNVSCNNLEDLPVTLGLLRNLRTFYADENYLLFIPAELGSCNGITVLSLRSNR 351

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           +  +PD IG +  L  L+L  N++  LP  +++L  L+ L L  N    L
Sbjct: 352 LEYIPDEIGRIPRLRVLNLSDNRLRYLPFTITKLKDLQALWLAENQTCPL 401



 Score = 46.6 bits (109), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 33/114 (28%), Positives = 60/114 (52%), Gaps = 3/114 (2%)

Query: 259 LSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           L  R+ N+  +P  + +   +L EL +  N+++ +P  L     + K+ + NN  ++  +
Sbjct: 22  LDYRHCNLTDVPAQVFNFERTLEELYLDNNQIQDLPRELFCCHGIRKLCLSNN--EVTNI 79

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           P +IG+L  LEELD+S N I  +P++      LR +    NPL   P  + ++G
Sbjct: 80  PPAIGSLINLEELDVSKNGIIDIPENINCCKCLRSVNANVNPLGKLPEGLTQLG 133


>gi|341884210|gb|EGT40145.1| hypothetical protein CAEBREN_23247 [Caenorhabditis brenneri]
          Length = 559

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 152/309 (49%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LSEN + ++P ++  L SL+ LDL  N++ E+P  I  + SL  L
Sbjct: 111 LPTEIGQLVNLKKLGLSENALTSLPDSLASLESLETLDLRHNKLTEVPPVIYKITSLETL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I A+   +  LV+L+ LD+  N +  LP +IG L SL   +V  N L  +P  I
Sbjct: 171 WLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+C SL +L + +N L  LP ++GK+ +L  + +RYN I+ +P+ + +   L E  V  N
Sbjct: 231 GECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESN 290

Query: 288 ELESVPESLCF------------------------------------------------- 298
            L+ +P +L                                                   
Sbjct: 291 HLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSK 350

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           AT L K+N+  N  +L +LP  +G+   + EL++S NQ++VLP+    L  L +L +  N
Sbjct: 351 ATRLTKLNLKEN--ELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNN 408

Query: 359 PLEVPPRNI 367
            L+  P  I
Sbjct: 409 QLKKLPNQI 417



 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 133/229 (58%), Gaps = 2/229 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           ++LDL +  I  +P  I +L  L  L L  N+++ LP  + +LV L++L L  N L+SLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           DS+ SL SL+ L +  N L E+P  I + +SL  L + YNR+ A+ E +G +  L++L V
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAVDEQIGNLVKLKMLDV 195

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N I++LP+ +  L+SL    VS+N L  VPE +    +L ++++ +N  DL  LP SI
Sbjct: 196 RENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHN--DLSELPYSI 253

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L  L  + I  N+IR +P       +L    V+ N L++ P N++ M
Sbjct: 254 GKLTSLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTM 302



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/290 (29%), Positives = 146/290 (50%), Gaps = 30/290 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P  I +L+ L  L L +N++  +P  IG L +LKKL L  N +  LPDS+  L SL
Sbjct: 85  ITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDSLASLESL 144

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N+++ +P  + ++  LE L L  N + ++ + IG+L+ LK L V  N + ELP
Sbjct: 145 ETLDLRHNKLTEVPPVIYKITSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELP 204

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+ +SL    V YN L  +PE +G+  +L  L +++N++ +LP ++  L+SL  + +
Sbjct: 205 SAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYSIGKLTSLVRIGI 264

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS- 343
            +N+                         +R +P  + N + LEE  + +N +++LP + 
Sbjct: 265 RYNK-------------------------IRCIPSELENCQQLEEFIVESNHLQLLPPNL 299

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPV 393
             ML ++  + +  N L   P      G Q  V  +   +E       P+
Sbjct: 300 LTMLPKIHTVNLSRNELTAFPAG----GPQQFVSTVTINMEHNQISKIPI 345



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 164/350 (46%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IGKL+SLV   +S N +  VP  IG   SL +LDL  N + ELP SIG L 
Sbjct: 198 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECQSLTQLDLQHNDLSELPYSIGKLT 257

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI-------------- 208
           SLV + +R N+I  +P  L    +LEE  + SN+L  LP ++ +++              
Sbjct: 258 SLVRIGIRYNKIRCIPSELENCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELT 317

Query: 209 -----------------------------------SLKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N+L  LP  +G  +S+
Sbjct: 318 AFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSI 377

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+LK LPE + K+  LE+L +  N +K+LP  + +L  LRELD+  NELE+VP
Sbjct: 378 TELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVP 437

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             + F   L K+ + +N   + +LPRSIGNL  L++L +  N +  +P+    L  L+ L
Sbjct: 438 TEIGFLQHLTKLWVQSN--KIVSLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSL 495

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  I   G   V+QY+
Sbjct: 496 YLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYL 545



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 109/190 (57%), Gaps = 8/190 (4%)

Query: 90  KGTR--DLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           K TR   LNL +N+L+     LP  +G  +S+  L+LS N++  +P  I  L +L+ L L
Sbjct: 350 KATRLTKLNLKENELVS----LPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVL 405

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N++ +LP+ IG+L  L  LDL  N++  +P  +  L  L +L + SN + SLP SIG+
Sbjct: 406 SNNQLKKLPNQIGNLKKLRELDLEENELETVPTEIGFLQHLTKLWVQSNKIVSLPRSIGN 465

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRV-DYNRLKALPEAVGKIHTLEVLSVRYNN 265
           L SL+ L +  N+L  +P  IG   SL+ L + D + L  LP  +    +LE++S+  + 
Sbjct: 466 LCSLQDLRLGENNLTAIPEEIGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSP 525

Query: 266 IKQLPTTMSS 275
           + Q+P  +++
Sbjct: 526 LSQIPPEITA 535



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 229 QCSSLRELRVDYNRLK--ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +C   ++ R+D + ++  ++P  + ++  L  L +  N +  LPT +  L +L++L +S 
Sbjct: 69  KCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSE 128

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N L S+P+SL    +L  +++ +N   L  +P  I  +  LE L +  N+I  + +    
Sbjct: 129 NALTSLPDSLASLESLETLDLRHN--KLTEVPPVIYKITSLETLWLRYNRIVAVDEQIGN 186

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           L +L++L V+EN +   P  I ++ +  V
Sbjct: 187 LVKLKMLDVRENKIRELPSAIGKLTSLVV 215


>gi|395517545|ref|XP_003762936.1| PREDICTED: protein LAP2-like, partial [Sarcophilus harrisii]
          Length = 592

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 47  LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGL 106

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I    SL+ L++ +N L++LP
Sbjct: 107 KEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLP 166

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP+++G + ++E L   +N I+ LP+++  LS++R    
Sbjct: 167 ESIGSLKKLTTLKVDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAA 226

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P+ +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 227 DHNYLQQLPQEIGSWKHVTVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRMKNLPFSF 284

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 285 TKLQQLTAMWLSDN 298



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 24  ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 83

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 84  ERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIEVVE 143

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL +L +  N L+ LPE++G +  L  L V  N +  LP ++  L S+ ELD 
Sbjct: 144 EGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQLMYLPDSIGGLVSIEELDC 203

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +N+  L+ LP+ IG+ + +  L + +N++  LP+  
Sbjct: 204 SFNEIEALPSSIGQLSNIRTFAADHNY--LQQLPQEIGSWKHVTVLFLHSNKLETLPEEM 261

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N ++  P +  ++  Q    +++D
Sbjct: 262 GDMQKLKVINLSDNRMKNLPFSFTKL-QQLTAMWLSD 297



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 131/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  L+ LK+  +  NR+  +P  IG L 
Sbjct: 68  NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLK 127

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    LE+L L SN+L  LP+SIGSL  L  L V+ N L  
Sbjct: 128 QLTYLDVSKNNIEVVEEGISGCESLEDLLLSSNSLQQLPESIGSLKKLTTLKVDENQLMY 187

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S   +  L
Sbjct: 188 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPQEIGSWKHVTVL 247

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   ++ LP S   L+ L  + +S+NQ + L
Sbjct: 248 FLHSNKLETLPEEMGDMQKLKVINLSDNR--MKNLPFSFTKLQQLTAMWLSDNQSKPL 303


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 138/250 (55%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 142/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKDIGQLKNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLIVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 161/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   ++   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKDIGQLKNLQELNLKWNLLTT---LPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLIVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 145/303 (47%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLD--------------LRGNQI-----S 175
            DL                        LSL Y D              LRG  +     S
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L ++P  IG L +L+ L +E N+LE LP  IGQ  +L++
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 122/226 (53%), Gaps = 2/226 (0%)

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           ++ A    +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L++LP  I
Sbjct: 31  EVEAGTYRDLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEI 90

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N
Sbjct: 91  GQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKN 150

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +   P  +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L
Sbjct: 151 KLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQL 208

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + L+ L++ +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 209 QNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVFPKEIGQL 254



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  LP  +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ      SF   
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 98.2 bits (243), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 53/192 (27%), Positives = 97/192 (50%), Gaps = 4/192 (2%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           + LS  ++ +E++ G+     L  ++ + + ++ L +    L  LP  IGQ  +L+EL +
Sbjct: 21  ITLSCEIQADEVEAGT--YRDLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNL 78

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            +N L  LP+ +G++  L+ L +R N +   P  +  L  L  LD+S N L  +P  +  
Sbjct: 79  KWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGR 138

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  + +  N   L   P+ IG L+ L++L +S N++  LP     L  L+ L +Q+N
Sbjct: 139 LQNLQDLGLYKN--KLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196

Query: 359 PLEVPPRNIVEM 370
                P+ I ++
Sbjct: 197 QFTTLPKEIGQL 208



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|379730485|ref|YP_005322681.1| hypothetical protein SGRA_2368 [Saprospira grandis str. Lewin]
 gi|378576096|gb|AFC25097.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 509

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 107/327 (32%), Positives = 172/327 (52%), Gaps = 52/327 (15%)

Query: 85  EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI-------- 135
           E+   KG + LN++ N+L D    LPDS+  L  L  LD+S+NR+  +P  +        
Sbjct: 34  EIGRSKGMKQLNIEDNRLKD----LPDSLANLGQLEWLDISDNRLSPLPKVLFQLRKLRW 89

Query: 136 -----GGLSSLK----------KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
                 GLS L           +LDL  N++  LP++ G L +L  L L  NQ+SALP +
Sbjct: 90  LDLSNNGLSELGEELAAWEELMRLDLKNNQLQALPNNFGQLKALRKLLLERNQLSALPAS 149

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
             +L +L++LDL  N  + LP+ IG L SLK+L +  N + +L   +GQ S+L EL+ + 
Sbjct: 150 FGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSLSANPMPQLTKVLGQLSNLEELQAEG 209

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
             L+ +P+ +G+++ L+ L + YN +K L   + + S+L +LD+  N LE +P +L    
Sbjct: 210 LGLEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQ 269

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISN----------------------NQIR 338
            L  +N+ +N   L  LP  +  ++ LEELD+SN                      NQ+R
Sbjct: 270 QLKVLNLEDN--PLGELPLLLQEIQALEELDMSNCNLVDLGAGLSLPALHWLDLSANQLR 327

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPR 365
            LP +F  L+ L  L +++N L+  P+
Sbjct: 328 DLPSNFGQLTALNWLDLRDNQLQKWPK 354



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/283 (33%), Positives = 157/283 (55%), Gaps = 6/283 (2%)

Query: 82  SLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL 141
            L E+ ++K  + L+   K    ++ LP  IG+   +  L++ +NR+  +P ++  L  L
Sbjct: 8   QLAELLAQKSLKKLDASRK---GLQELPQEIGRSKGMKQLNIEDNRLKDLPDSLANLGQL 64

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           + LD+  NR+  LP  +  L  L +LDL  N +S L   L+    L  LDL +N L +LP
Sbjct: 65  EWLDISDNRLSPLPKVLFQLRKLRWLDLSNNGLSELGEELAAWEELMRLDLKNNQLQALP 124

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           ++ G L +L+KL++E N L  LP + GQ   L++L +  N    LPE +G++ +L+ LS+
Sbjct: 125 NNFGQLKALRKLLLERNQLSALPASFGQLQQLQQLDLSENAFTQLPEEIGQLKSLKQLSL 184

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N + QL   +  LS+L EL      LE VP+ +     L  + +G N   L++L   +
Sbjct: 185 SANPMPQLTKVLGQLSNLEELQAEGLGLEEVPKEIGQLNNLQSLFLGYN--RLKSLAAEL 242

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           GN   LE+LD+ NN++  LP +     +L+VL +++NPL E+P
Sbjct: 243 GNCSALEQLDLGNNRLERLPLNLARCQQLKVLNLEDNPLGELP 285



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 146/277 (52%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E +P  IG+L++L SL L  NR+ ++ A +G  S+L++LDL  NR+  LP ++     L
Sbjct: 212 LEEVPKEIGQLNNLQSLFLGYNRLKSLAAELGNCSALEQLDLGNNRLERLPLNLARCQQL 271

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+L  N +  LP+ L  +  LEELD+ + NL  L   + SL +L  L +  N L +LP
Sbjct: 272 KVLNLEDNPLGELPLLLQEIQALEELDMSNCNLVDLGAGL-SLPALHWLDLSANQLRDLP 330

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
              GQ ++L  L +  N+L+  P+A+  +  +  L +  N ++Q+  +      L ELD+
Sbjct: 331 SNFGQLTALNWLDLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDLDWPELEELDL 390

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NEL  +         L ++N+  N   L  LP     L  LEELD+S+NQ+  LP S 
Sbjct: 391 SKNELTELSGQWDKLPQLRQLNLEKN--QLAQLPEDWRPLSNLEELDLSDNQLDSLPQSL 448

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             L +++ L ++ N     P+ ++ +  Q    Y+ +
Sbjct: 449 AELDQIQWLDLRNNQFTEFPQALLPLVGQLQALYLGE 485



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/208 (31%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  + ++ +L  LD+S   +V + A +  L +L  LDL AN++ +LP + G L +L +L
Sbjct: 284 LPLLLQEIQALEELDMSNCNLVDLGAGLS-LPALHWLDLSANQLRDLPSNFGQLTALNWL 342

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR NQ+   P AL  L ++ +L L  N L  +  S      L++L +  N+L EL    
Sbjct: 343 DLRDNQLQKWPKALEGLSQIRQLLLAGNFLRQINLSDLDWPELEELDLSKNELTELSGQW 402

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   LR+L ++ N+L  LPE    +  LE L +  N +  LP +++ L  ++ LD+  N
Sbjct: 403 DKLPQLRQLNLEKNQLAQLPEDWRPLSNLEELDLSDNQLDSLPQSLAELDQIQWLDLRNN 462

Query: 288 ELESVPESLC-FATTLVKMNIG-NNFAD 313
           +    P++L      L  + +G NN+++
Sbjct: 463 QFTEFPQALLPLVGQLQALYLGENNWSE 490


>gi|428186142|gb|EKX54993.1| hypothetical protein GUITHDRAFT_62926 [Guillardia theta CCMP2712]
          Length = 495

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 92/266 (34%), Positives = 152/266 (57%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP S+G L SL SLDLS+N +VA+   I  L +L++L LH N I E+P+ I  L SL
Sbjct: 70  IQTLPASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITEVPECISALQSL 129

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               L  N +  LP +L +L  L+ L +  NNLS +PD I  + +L KLI+  N + ++P
Sbjct: 130 KEFSLSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLILVENHITKVP 189

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G  ++L +L + YN+LK LP+ +G++  L+ L +  N I +LP ++  L+SL+EL  
Sbjct: 190 KELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSIEHLTSLKELSF 249

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N +   P SL   T L  + +  +   +  +  ++  L  L  L++++N+++ +P+S 
Sbjct: 250 NDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLNSNRLQKIPESI 309

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
           R L +L       N +E  P  I E+
Sbjct: 310 RNLEQLVTFSCGSNFIEDIPPEICEL 335



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/309 (33%), Positives = 170/309 (55%), Gaps = 15/309 (4%)

Query: 83  LIEVSSKKGTRDLNLQNKLMD------NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG 136
           L+E    K  ++L L   L D       ++ LP  IG+L  L  L L EN I  +P +I 
Sbjct: 180 LVENHITKVPKELGLLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSIE 239

Query: 137 GLSSLKKLDLHANRIIELPDSIGDL--LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            L+SLK+L  + NRI   P S+G L  L ++ L L  N+IS +  AL +L +L  L+L S
Sbjct: 240 HLTSLKELSFNDNRITRFPLSLGALTQLEILELSLSENRISRMHPALFKLTQLTILNLNS 299

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N L  +P+SI +L  L      +N +E++P  I +  +LR+L +  N ++ +   +G + 
Sbjct: 300 NRLQKIPESIRNLEQLVTFSCGSNFIEDIPPEICELDNLRQLVLFGNNIRHVCPELGGLT 359

Query: 255 TLEVLSVRYNNIKQLPTTM-SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
            LEVLS+  N +  +P  M  +L++L+EL ++FN L S+P S+ +   L ++ + +N  +
Sbjct: 360 GLEVLSLSQNQLTDIPKQMLKTLTNLKELWLAFNHLHSIPSSIGYLKHLEQLWLQDN--E 417

Query: 314 LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQ 373
           L +LP  IG+L+ L  L ++ N+I  LPDS +   RL + +  E  ++   +N V +  +
Sbjct: 418 LESLPPQIGSLKNLNVLTLTGNRISELPDSLK---RLEISQYHEGHVDKNKKN-VHVSGE 473

Query: 374 AVVQYMADL 382
              +Y  DL
Sbjct: 474 EGAEYWQDL 482



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 103/299 (34%), Positives = 166/299 (55%), Gaps = 14/299 (4%)

Query: 80  LASLIEVSSKKG---TRDLNL---QNKLMD--NIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           L+S  E S  +G   T + NL   Q  ++D  NI+ LP  I ++  L SL+ S N I  +
Sbjct: 14  LSSFWEYSEARGVFLTGEGNLKYLQEVVLDHNNIQILPAVISQMPCLESLNASANLIQTL 73

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA++G L SLK LDL  N ++ + + I +L++L  L L  N+I+ +P  +S L  L+E  
Sbjct: 74  PASVGNLISLKSLDLSKNGLVAIHEEISNLVNLEQLKLHENEITEVPECISALQSLKEFS 133

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  NNL  LP+S+  L  LK L+V  N+L E+P  I +  +L +L +  N +  +P+ +G
Sbjct: 134 LSQNNLVQLPNSLPQLTGLKNLLVAKNNLSEIPDLIFKIQTLTKLILVENHITKVPKELG 193

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
            +  L  L + YN +K LP  +  L  L  L +  N +  +P+S+   T+L +++  +N 
Sbjct: 194 LLTNLTDLVLTYNKLKTLPKEIGELWKLDYLVLDENMITELPDSIEHLTSLKELSFNDN- 252

Query: 312 ADLRALPRSIGNLEMLE--ELDISNNQI-RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             +   P S+G L  LE  EL +S N+I R+ P  F+ L++L +L +  N L+  P +I
Sbjct: 253 -RITRFPLSLGALTQLEILELSLSENRISRMHPALFK-LTQLTILNLNSNRLQKIPESI 309


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 158/280 (56%), Gaps = 8/280 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  L  L +L  LD+  NN+  + D I    SL+ L++ +N +++LP
Sbjct: 210 KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP+++G +  +E L   +N I+ LP+++  L  +R    
Sbjct: 270 ESIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +    +   + + +N   L +LP  +G+++ L+ +++S+N++R LP SF
Sbjct: 330 DHNFLTQLPPEIGTWKSATVLFLHSN--KLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 345 RMLSRLRVLRVQEN---PLEVPPRNIVEMGAQAVV--QYM 379
             L +L  + + +N   PL +P +   +   Q VV   YM
Sbjct: 388 TRLQQLTAMWLSDNQSKPL-IPLQKETDQDTQKVVLTNYM 426



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/338 (31%), Positives = 163/338 (48%), Gaps = 29/338 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN +  ++ C C  G++    SL     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLLVRLVPCRCLRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D N+L  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +   +S   SL++L +S N ++ +PES+     L  + +  N   L  LP SIG L  +E
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDEN--QLMYLPDSIGGLTAIE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR 365
           +LD S N+I  LP S   L ++R      N L ++PP 
Sbjct: 303 DLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPE 340



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  N++  +P  +G+L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN +  LP+SIG+L  L  L V+ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +++ +L   +N ++ALP ++G +  +   +  +N + QLP  + +  S   L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LES+PE +     L  +N+ +N   LR LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDN--RLRNLPFSFTRLQQLTAMWLSDNQSKPL 406



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 26/149 (17%)

Query: 220 LEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LE++P  I     +L EL +D N+++ LP+ +    +L  LS+  N++  LP ++++L +
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLIN 93

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELDVS N ++  PE+                         I N ++L  ++ S N I 
Sbjct: 94  LRELDVSKNGIQEFPEN-------------------------IKNCKVLTIVEASVNPIS 128

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPD F  L  L  L + +  L+  P N 
Sbjct: 129 KLPDGFSQLLNLTQLYLNDAFLDFLPANF 157



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 278 SLRELDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           ++  LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N 
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDND 80

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           + +LP S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 284

 Score =  138 bits (347), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 127/220 (57%), Gaps = 3/220 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R LNL  +    ++  P  IG+L +L  L LS N+   +P  I  L +LK LDL  N+
Sbjct: 49  GVRILNLSRQ---KLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQ 105

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP  IG L +L  LDL  NQ++ LP  + +L  L++L+L +N L +LP  IG L +L
Sbjct: 106 LKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNL 165

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           +K+ ++ N L  LP+ IGQ  +L  L ++YN+L  LP+ +G++  LE L + YN +  LP
Sbjct: 166 QKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTMLP 225

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
             +  L +L  L + +N+L ++P+ +     L ++ +  N
Sbjct: 226 QEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYN 265



 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 123/217 (56%), Gaps = 2/217 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++   P  IG L +L++L L +N+   LP  I  L +L  LDL  NQ+  LP  
Sbjct: 53  LNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+ LDLGSN L+ LP  IG L +L+KL +  N L+ LP  IGQ  +L+++ +D 
Sbjct: 113 IGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQKMNLDK 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  LP  +G++  LE L + YN +  LP  +  L +L  L +++N+L  +P+ +    
Sbjct: 173 NRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTMLPQEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L  + +   +  L  LP+ IG L+ L+ L +  NQ 
Sbjct: 233 NLEGLYL--KYNQLTTLPKEIGRLQNLKRLYLKYNQF 267



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 113/184 (61%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L SLDL +N++  +P  IG L +LK LDL +N++  LP  IG L +L  L
Sbjct: 86  LPKEIEQLQNLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  LP  + +L  L++++L  N L++LP+ IG L +L+ L +  N L  LP  I
Sbjct: 146 NLWNNQLKTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEI 205

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L ++YN+L  LP+ +G++  LE L ++YN +  LP  +  L +L+ L + +N
Sbjct: 206 GQLQNLESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYN 265

Query: 288 ELES 291
           +  S
Sbjct: 266 QFSS 269



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 116/215 (53%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   ++   P  + +L  L+EL L SN  ++LP  I  L +LK 
Sbjct: 39  DLTKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKS 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L+ LP  IG+  +L+ L +  N+L  LP+ +G++  L+ L++  N +K LP  
Sbjct: 99  LDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L+++++  N L ++P  +     L  + +  N+  L  LP+ IG L+ LE L +
Sbjct: 159 IGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYL--NYNQLTILPKEIGQLQNLESLYL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + NQ+ +LP     L  L  L ++ N L   P+ I
Sbjct: 217 NYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEI 251



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 59/181 (32%), Positives = 99/181 (54%), Gaps = 2/181 (1%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L+L    L + P  IG L +L++L + +N    LP  I Q  +L+ L +  N+LK LP+ 
Sbjct: 53  LNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKTLPKE 112

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +GK+  L+ L +  N +  LP  +  L +L++L++  N+L+++P+ +     L KMN+  
Sbjct: 113 IGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQKMNLDK 172

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N   L  LP  IG L+ LE L ++ NQ+ +LP     L  L  L +  N L + P+ I +
Sbjct: 173 N--RLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTMLPQEIGQ 230

Query: 370 M 370
           +
Sbjct: 231 L 231



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 77/139 (55%), Gaps = 2/139 (1%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            +R L +   +LK  P+ +G++  L+ L +  N    LP  +  L +L+ LD+  N+L++
Sbjct: 49  GVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQLKT 108

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P+ +     L  +++G+N   L  LP+ IG L+ L++L++ NNQ++ LP     L  L+
Sbjct: 109 LPKEIGKLQNLKSLDLGSN--QLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQNLQ 166

Query: 352 VLRVQENPLEVPPRNIVEM 370
            + + +N L   P  I ++
Sbjct: 167 KMNLDKNRLNTLPNEIGQL 185


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 164/278 (58%), Gaps = 5/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 93  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNLR 152

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LD+ +N L+++P S  SL SL +L + +N L+ 
Sbjct: 153 NLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKS 212

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+A+P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 213 LPAEISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRNKLRFLP-EFPSCRLLKEL 271

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E + PE L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 272 YVGENQIEILGPEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 329

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            S   L  L+ L ++ NPL    R I+  G Q V++Y+
Sbjct: 330 CSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYL 366



 Score = 89.4 bits (220), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 86/323 (26%), Positives = 144/323 (44%), Gaps = 52/323 (16%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+ +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L  L +L 
Sbjct: 283 PEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLA 341

Query: 169 LRGNQISA--------------------------------------LP----VALSRLVR 186
           L GN +                                        LP    V +  ++ 
Sbjct: 342 LEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSPSDSVIGTAMTLPSESRVNVHAIIT 401

Query: 187 LEELDLGSNNLSSLPDSI-----GSLISLKKLIVETNDLEELPHTIGQCSSL-RELRVDY 240
           L+ LD      + +PD +     G++I+   +    N L E+P  I +   +  ++ + +
Sbjct: 402 LKILDYSGKQTTLIPDEVFDAVKGNIIT--SVNFSKNQLCEIPKRIVELKEMVSDVNLSF 459

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE L    
Sbjct: 460 NKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHIP 519

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +  NP 
Sbjct: 520 TLETILISNNQVG-SVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF 578

Query: 361 EVPPRNIVEMGAQAVVQYMADLV 383
            VP   I+  G  A+++Y+ D +
Sbjct: 579 RVPRAAILMKGTAAILEYLRDRI 601



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 85  LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLQ 142

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  L  L  L +  N L   P
Sbjct: 143 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVP 191


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  138 bits (347), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 156/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+SIG+L+ LK L ++ N L ELP  IG   SL  L V  NRL+ LPE +  + +L
Sbjct: 186 IYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE+     +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLTEN--RLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEL----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LPDS+ +L  L  LDL  N I ++P +IG L  LK L L  N++ ELP  IG+L SL
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L ++PD IG L  L  L V+ N L +LP
Sbjct: 223 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLP 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
              G C SL EL +  NRL  LP+++GK+  L  L+   N +  LP  +    SL    V
Sbjct: 283 EATGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  L  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 343 RDNRLTRIPAELSQATELHVLDVAGN--RLLHLPLSLTTLK-LKALWLSDNQ 391



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 93/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I +LP ++  LV L++L L  N LS LP  IG+L SL  L V  N LE LP  I
Sbjct: 180 DLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP       SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAELSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTTLKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 136/260 (52%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N + +LPE++G +  L+ L +  N + +LP  + +L SL  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEATGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENRLLTLPKSI 308



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVRLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNDI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L++     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|159487945|ref|XP_001701983.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
 gi|158281202|gb|EDP06958.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
          Length = 1784

 Score =  137 bits (346), Expect = 7e-30,   Method: Composition-based stats.
 Identities = 98/288 (34%), Positives = 150/288 (52%), Gaps = 16/288 (5%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            LP  +  ++SL  LD+SEN++  V   IG L SL +LDLH N +  LP +IG L  + +L
Sbjct: 1499 LPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSLTRLDLHTNMLRGLPATIGLLTRVKHL 1558

Query: 168  DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
             L  NQ+ +LP  + +   L  L L +N L+ LP  IG+L ++ +L V  N+L  LP  +
Sbjct: 1559 SLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAEL 1618

Query: 228  GQCSSLRELRVDYNRLKALPEA--VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            G+   L  + +  N+L  LP    +G   T   L +  N ++++P  +  LS L+EL + 
Sbjct: 1619 GRL-PLEAVSLFKNKLVTLPPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLY 1677

Query: 286  FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
             N+L SVP  +   T L ++ +  N   L  LP+ I  L  L+EL + NNQ+  LP+   
Sbjct: 1678 SNQLTSVPPEIGELTELRRLWLDRN--QLTHLPKEISKLTRLQELYLDNNQLVELPEELA 1735

Query: 346  MLSRLRVLRVQENP-LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
             +++LR L +  NP L +PP           V  +  L E  D  T P
Sbjct: 1736 SMTQLRKLYLDGNPNLVLPP----------AVAALPCLTESADYGTNP 1773



 Score =  137 bits (344), Expect = 1e-29,   Method: Composition-based stats.
 Identities = 94/267 (35%), Positives = 145/267 (54%), Gaps = 7/267 (2%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATI-GGLSSLKKLDLHANRII-ELPDSIGDLLSLV 165
            LP+ +  L SL SL L  N + A+P  +  GLS L+KL L AN +   LP  +  + SL 
Sbjct: 1451 LPEEVANLRSLDSLWLGSNLLRALPGGLNSGLSCLRKLWLPANMLSGTLPAEVCAITSLE 1510

Query: 166  YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            +LD+  N+++ +   + +L  L  LDL +N L  LP +IG L  +K L +  N LE LP 
Sbjct: 1511 WLDVSENKLTEVCPEIGQLQSLTRLDLHTNMLRGLPATIGLLTRVKHLSLHFNQLESLPG 1570

Query: 226  TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
             IGQCSSL  L ++ NRL  LP  +G +  +  L+V  N +  LP  +  L  L  + + 
Sbjct: 1571 EIGQCSSLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAELGRLP-LEAVSLF 1629

Query: 286  FNELESVPESLCF--ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
             N+L ++P  L    A T  ++ +  N  +LR +P+ IG L +L+EL + +NQ+  +P  
Sbjct: 1630 KNKLVTLPPELLLGLAGTCCRLGLYEN--ELREVPKEIGKLSLLQELWLYSNQLTSVPPE 1687

Query: 344  FRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L+ LR L +  N L   P+ I ++
Sbjct: 1688 IGELTELRRLWLDRNQLTHLPKEISKL 1714



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 67/203 (33%), Positives = 104/203 (51%), Gaps = 24/203 (11%)

Query: 103  DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
            + +E LP  IG+ SSLV L L+ NR+  +P  IG L+++ +L +H N +  LP  +G L 
Sbjct: 1563 NQLESLPGEIGQCSSLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAELGRLP 1622

Query: 162  ---LSL--------------------VYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
               +SL                      L L  N++  +P  + +L  L+EL L SN L+
Sbjct: 1623 LEAVSLFKNKLVTLPPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLYSNQLT 1682

Query: 199  SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            S+P  IG L  L++L ++ N L  LP  I + + L+EL +D N+L  LPE +  +  L  
Sbjct: 1683 SVPPEIGELTELRRLWLDRNQLTHLPKEISKLTRLQELYLDNNQLVELPEELASMTQLRK 1742

Query: 259  LSVRYNNIKQLPTTMSSLSSLRE 281
            L +  N    LP  +++L  L E
Sbjct: 1743 LYLDGNPNLVLPPAVAALPCLTE 1765


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG+  +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGEC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++G+  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG+  +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGEC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++G+  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 139/246 (56%), Gaps = 4/246 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL+ NR+ A+P  +G L  L++L L  N+I  LP  +G L++L  L +  N++S LP +
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSS 93

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L  L RLE L L  N L++LP  IG L  L+   V  N L  LP ++ +   L+ L +  
Sbjct: 94  LYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAE 153

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE-LDVSFNELESVPESL-CF 298
           N+L +L E +G++  L++L   +N +  LP ++  L++L   L +S N L ++ ESL   
Sbjct: 154 NQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAH 213

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            T L  +NI +N   L  LPRS+G L  L+EL I NNQ+  LP+    L+ LR L    N
Sbjct: 214 LTQLAYLNITDN--QLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNN 271

Query: 359 PLEVPP 364
            LE  P
Sbjct: 272 RLETLP 277



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/266 (35%), Positives = 144/266 (54%), Gaps = 4/266 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ +G L  L  L L +N+I  +P  +G L +L+ L +  NR+  LP S+  L  L  L
Sbjct: 44  LPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETL 103

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP  + RL  L +  +G N L+SLP+S+  L  L+ L +  N L  L   I
Sbjct: 104 RLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERI 163

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTL-EVLSVRYNNIKQLPTTM-SSLSSLRELDVS 285
           GQ + L+ L   +N+L  LPE++G++  L   L +  N +  L  ++ + L+ L  L+++
Sbjct: 164 GQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNIT 223

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L  +P SL   T L ++ I NN   L  LP  +GNL  L EL   NN++  LPDS  
Sbjct: 224 DNQLTELPRSLGCLTNLKELRIYNN--QLATLPEELGNLAALRELHAMNNRLETLPDSLG 281

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMG 371
            L +LR LR+  N L   P  + E+ 
Sbjct: 282 KLKQLRELRLANNRLARLPTYLGELA 307



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 27/277 (9%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M+ +  LP S+  L  L +L L +NR+  +PA IG L  L+   +  N++  LP+S+ +L
Sbjct: 84  MNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWEL 143

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI------- 214
             L  L+L  NQ+S+L   + +L +L+ LD G N L++LP+S+G L +L   +       
Sbjct: 144 GRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRL 203

Query: 215 ------------------VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
                             +  N L ELP ++G  ++L+ELR+  N+L  LPE +G +  L
Sbjct: 204 TTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAAL 263

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L    N ++ LP ++  L  LREL ++ N L  +P  L     L  +++ NN   L +
Sbjct: 264 RELHAMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNL--LAS 321

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           LP S+ NL  L  LD+  N++  LP   + L  L  L
Sbjct: 322 LPASLDNLAKLRALDLRANRLTTLPPGLQRLQHLEKL 358



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 92/264 (34%), Positives = 147/264 (55%), Gaps = 4/264 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  +GKL +L +L +  NR+  +P+++  L  L+ L L+ NR+  LP  IG L 
Sbjct: 62  NQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQ 121

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L    +  NQ+++LP +L  L RL+ L+L  N LSSL + IG L  L+ L    N L  
Sbjct: 122 GLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQLQMLDAGHNQLTT 181

Query: 223 LPHTIGQCSSLRE-LRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           LP ++GQ ++L   L +  NRL  L E++   +  L  L++  N + +LP ++  L++L+
Sbjct: 182 LPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELPRSLGCLTNLK 241

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           EL +  N+L ++PE L     L +++  NN   L  LP S+G L+ L EL ++NN++  L
Sbjct: 242 ELRIYNNQLATLPEELGNLAALRELHAMNN--RLETLPDSLGKLKQLRELRLANNRLARL 299

Query: 341 PDSFRMLSRLRVLRVQENPLEVPP 364
           P     L+ L  L ++ N L   P
Sbjct: 300 PTYLGELANLTSLDLRNNLLASLP 323



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 148/251 (58%), Gaps = 9/251 (3%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           ++   +G RD ++ +N+L      LP+S+ +L  L +L+L+EN++ ++   IG L+ L+ 
Sbjct: 116 DIGRLQGLRDFSVGKNQLTS----LPESLWELGRLQALNLAENQLSSLSERIGQLTQLQM 171

Query: 144 LDLHANRIIELPDSIGDLLSLV-YLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSLP 201
           LD   N++  LP+S+G L +L  YL L  N+++ L  +L + L +L  L++  N L+ LP
Sbjct: 172 LDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTELP 231

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
            S+G L +LK+L +  N L  LP  +G  ++LREL    NRL+ LP+++GK+  L  L +
Sbjct: 232 RSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRL 291

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N + +LPT +  L++L  LD+  N L S+P SL     L  +++  N   L  LP  +
Sbjct: 292 ANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRAN--RLTTLPPGL 349

Query: 322 GNLEMLEELDI 332
             L+ LE+LD+
Sbjct: 350 QRLQHLEKLDL 360



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/243 (34%), Positives = 128/243 (52%), Gaps = 4/243 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  NR+  LP+ +G L  L  L L  NQI+ LP  L +LV L  L +  N LS LP S
Sbjct: 34  LDLTGNRLTALPEELGSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSS 93

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +  L  L+ L +  N L  LP  IG+   LR+  V  N+L +LPE++ ++  L+ L++  
Sbjct: 94  LYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAE 153

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK-MNIGNNFADLRALPRSI- 321
           N +  L   +  L+ L+ LD   N+L ++PESL   T L   + + NN   L  L  S+ 
Sbjct: 154 NQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNN--RLTTLSESLF 211

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
            +L  L  L+I++NQ+  LP S   L+ L+ LR+  N L   P  +  + A   +  M +
Sbjct: 212 AHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNN 271

Query: 382 LVE 384
            +E
Sbjct: 272 RLE 274



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 102/186 (54%), Gaps = 4/186 (2%)

Query: 167 LDLRGNQISALPVALSRLVRLEE--LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           L LR   ++ALP +LS         LDL  N L++LP+ +GSL  L++L ++ N +  LP
Sbjct: 9   LSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEELGSLEQLQELYLDDNQITTLP 68

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           H +G+  +LR L VD NRL  LP ++  +  LE L +  N +  LP  +  L  LR+  V
Sbjct: 69  HVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSV 128

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+PESL     L  +N+  N   L +L   IG L  L+ LD  +NQ+  LP+S 
Sbjct: 129 GKNQLTSLPESLWELGRLQALNLAEN--QLSSLSERIGQLTQLQMLDAGHNQLTTLPESL 186

Query: 345 RMLSRL 350
             L+ L
Sbjct: 187 GQLTNL 192



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 54/165 (32%), Positives = 96/165 (58%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
              L+ L  L++++N++  +P ++G L++LK+L ++ N++  LP+ +G+L +L  L    
Sbjct: 211 FAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMN 270

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N++  LP +L +L +L EL L +N L+ LP  +G L +L  L +  N L  LP ++   +
Sbjct: 271 NRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLA 330

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            LR L +  NRL  LP  + ++  LE L +R+  +  LPT +  L
Sbjct: 331 KLRALDLRANRLTTLPPGLQRLQHLEKLDLRWLKLSPLPTWLDQL 375



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 27/114 (23%)

Query: 259 LSVRYNNIKQLPTTMSSLSSL--RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           LS+RY  +  LPT++S       R LD++ N L ++PE L                    
Sbjct: 9   LSLRYRGLTALPTSLSLHQLSSLRVLDLTGNRLTALPEEL-------------------- 48

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                G+LE L+EL + +NQI  LP     L  LR L V  N L V P ++  +
Sbjct: 49  -----GSLEQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHL 97


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N ++ LP S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+S+G+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  +++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ DL   R
Sbjct: 360 LHVLDLAGNR 369



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+S+G LL L
Sbjct: 140 LQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCLRDN--RLTRIPAEVSQATELHVLDLAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN +  LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N + +LPE+VG +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L++     NPL   P++  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPEL 127


>gi|426215730|ref|XP_004002122.1| PREDICTED: leucine-rich repeat-containing protein 7 [Ovis aries]
          Length = 1537

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 141/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +LKKL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|157106660|ref|XP_001649425.1| shoc2 [Aedes aegypti]
 gi|108868804|gb|EAT33029.1| AAEL014718-PA [Aedes aegypti]
          Length = 527

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 161/350 (46%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG L +L +LDLS N +  +PA IG   +L  LDL  N ++++P++IG+L 
Sbjct: 171 NKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLA 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS------------- 209
           +L+ L LR NQ++++PV+L     ++E ++  N +S LPD + + +S             
Sbjct: 231 NLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFH 290

Query: 210 ------------------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  LP  IG  + +
Sbjct: 291 SYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 350

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL    N L  LP+ +  +  LE+L +  N +K++P T+ +L  LR LD+  N LES+P
Sbjct: 351 VELNFGTNSLTKLPDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLP 410

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             +     L K+ + +N   L +LPR+IG+L  L  L +  N ++ LP+    L  L  L
Sbjct: 411 SEIGLLHDLQKLILQSN--QLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 468

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  +V  G   V+QY+
Sbjct: 469 YINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYL 518



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/286 (32%), Positives = 146/286 (51%), Gaps = 28/286 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD I KL +L +L L  NRI  V   +  LS L  L L  N+I ELP +IG L++L  L
Sbjct: 130 IPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELPSAIGHLVNLTTL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N +  LP  +   V L  LDL  N+L  +P++IG+L +L +L +  N L  +P ++
Sbjct: 190 DLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGLRYNQLTSIPVSL 249

Query: 228 GQCSSLRELRVDYNRLKALPEA-VGKIHTLEVLSVRYNNIKQLP-------TTMSSLS-- 277
             C+ + E  V+ N +  LP+  +  +  L  +++  N     P       T ++S++  
Sbjct: 250 KNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINME 309

Query: 278 ----------------SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
                            L +L++  N L S+P  +   T +V++N G N   L  LP  I
Sbjct: 310 HNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTN--SLTKLPDDI 367

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             L+ LE L +SNN ++ +P++   L +LRVL ++EN LE  P  I
Sbjct: 368 HCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEI 413



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 151/300 (50%), Gaps = 9/300 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P S+   +SLV   L  N+I ++P  IG LS+LK L L+ N +  LPDS+ +L  L
Sbjct: 58  ITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKQL 117

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N++S +P  + +L  L  L L  N +  + D++ +L  L  L +  N + ELP
Sbjct: 118 KVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRENKIHELP 177

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG   +L  L + +N LK LP  +G    L  L +++N++  +P T+ +L++L  L +
Sbjct: 178 SAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLANLMRLGL 237

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLPDS 343
            +N+L S+P SL   T + + N+  N   +  LP   + +L  L  + +S N     P  
Sbjct: 238 RYNQLTSIPVSLKNCTHMDEFNVEGN--GISQLPDGLLASLSNLTTITLSRNAFHSYPSG 295

Query: 344 F-RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
                + +  + ++ N ++      ++ G  +  + +  L  K +A T       +W +M
Sbjct: 296 GPAQFTNVTSINMEHNQIDK-----IQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 350



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 128/245 (52%), Gaps = 3/245 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS++ I  +P ++   +SL +  L+ N+I  LP  IG L +L  L L  N +++LP +
Sbjct: 51  LDLSKSSITIIPPSVKDCTSLVEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDS 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L  L +L+ LDL  N LS +PD I  L +L  L +  N ++ +   +   S L  L +  
Sbjct: 111 LQNLKQLKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSHLTMLSLRE 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++  LP A+G +  L  L + +N++K LP  + +  +L  LD+  N+L  +PE++    
Sbjct: 171 NKIHELPSAIGHLVNLTTLDLSHNHLKHLPAEIGNCVNLTALDLQHNDLLDIPETIGNLA 230

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENP 359
            L  M +G  +  L ++P S+ N   ++E ++  N I  LPD     LS L  + +  N 
Sbjct: 231 NL--MRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNA 288

Query: 360 LEVPP 364
               P
Sbjct: 289 FHSYP 293



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +N+++  +D I++      +   L  L++ EN + ++P  IG  + + +L+   N + +L
Sbjct: 306 INMEHNQIDKIQY--GIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 363

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I  L +L  L L  N +  +P  +  L +L  LDL  N L SLP  IG L  L+KLI
Sbjct: 364 PDDIHCLQNLEILILSNNVLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLI 423

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +++N L  LP TIG  ++L  L V  N L+ LPE +G +  LE L +  N ++ +LP  +
Sbjct: 424 LQSNQLTSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLVKLPYEL 483

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L  + +    L ++P
Sbjct: 484 ALCQNLAIMSIENCPLSALP 503


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/262 (33%), Positives = 142/262 (54%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  IG L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NPL +  R  ++
Sbjct: 301 QNLQDLELLMNPLSLKERKRIQ 322



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 162/307 (52%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+++      E+   K  ++LNL+  L+     LP  IG+L +L  LDL +N++   
Sbjct: 57  GEKLTVLP----KEIGQLKNLQELNLKWNLLT---VLPKEIGQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N +         ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 137/266 (51%), Gaps = 29/266 (10%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++  +P  IG L +L++L+L  N +  LP  IG L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L +         
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLAT--------- 223

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                           LP  IG L+ L+EL + NN++ V P     L  L++L   EN L
Sbjct: 224 ----------------LPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRL 267

Query: 361 EVPPRNIVEMGAQAVVQYMADLVEKR 386
              P+   EMG    +Q + +LV  R
Sbjct: 268 TALPK---EMGQLQNLQTL-NLVNNR 289



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 96/303 (31%), Positives = 145/303 (47%), Gaps = 54/303 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLD--------------LRGNQI-----S 175
            DL                        LSL Y D              LRG  +     S
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFS 389

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L ++P  IG L +L+ L +E N+LE LP  IGQ  +L++
Sbjct: 390 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQK 449

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++P  
Sbjct: 450 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAE 509

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 510 IEQLKNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 567

Query: 356 QEN 358
           Q N
Sbjct: 568 QNN 570



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 5/190 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++ P  IG L +L+ L ++ N L  LP  I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL----- 282
            Q  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L     
Sbjct: 511 EQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 283 DVSFNELESV 292
             SF E E +
Sbjct: 571 QFSFEEQERI 580



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 116/246 (47%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+    P+ +GK+  L+ L+++ N +  LP  +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ      SF   
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQF-----SFEEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 117/218 (53%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ LP  + +L  L+EL+L  N L+ LP  IG L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 60/159 (37%), Positives = 85/159 (53%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+    P  IG L +L  L+L+ NQ++ LP  + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+ 
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQF 572



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 42/156 (26%), Positives = 78/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L  LP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIG 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 3/91 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ   + N   LP  I +L +L  LDL++N+   +P  IG L  L+ L
Sbjct: 486 EIGKLENLQTLNLQRNQLTN---LPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTL 542

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           DL  N++  LP  IG L +L +L L+ NQ S
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQFS 573


>gi|418755469|ref|ZP_13311672.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964178|gb|EKO32071.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 217

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 80/219 (36%), Positives = 128/219 (58%), Gaps = 2/219 (0%)

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L  NR+  LP+ IG L +L  L L  NQ++ LP+ + +L  L+EL+LG N L++LP  IG
Sbjct: 1   LTRNRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIG 60

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +++N L  LP  IG+  +L++L +D N+L  LP+ + K+  L+ L++ YN 
Sbjct: 61  KLQNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQ 120

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +  LP  +  L +L+ELD+  N+L ++ + +     L  +N+         LP+ IGNL+
Sbjct: 121 LTALPEEIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLN--DNQFTTLPKEIGNLQ 178

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            L+ELD+  NQ+  LP+    L  L+ L +  N L   P
Sbjct: 179 KLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTTLP 217



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 136/219 (62%), Gaps = 2/219 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           L+ NR+  +P  IG L +L++L L  N++  LP  IG L +L  L+L  NQ++ALP  + 
Sbjct: 1   LTRNRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIG 60

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L++L+L SN L++LP  IG L +LK L +++N L  LP  I +   L++L + YN+
Sbjct: 61  KLQNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQ 120

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L ALPE +GK+  L+ L +  N +  L   + +L +L+ L+++ N+  ++P+ +     L
Sbjct: 121 LTALPEEIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKL 180

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            ++++G  +  L ALP  IG L+ L++L ++NN++  LP
Sbjct: 181 QELDLG--YNQLTALPEEIGKLQNLKDLYLNNNKLTTLP 217



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/209 (33%), Positives = 128/209 (61%), Gaps = 3/209 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  ++L+L+N   + +  LP  IGKL +L  L+L  N++ A+P  IG L +LK L
Sbjct: 12  EIGKLQNLQELHLEN---NQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIGKLQNLKDL 68

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L +N++  LP  IG L +L  L+L  N+++ LP  + +L +L++L+L  N L++LP+ I
Sbjct: 69  NLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQLTALPEEI 128

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L + +N L  L   IG   +L+ L ++ N+   LP+ +G +  L+ L + YN
Sbjct: 129 GKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKLQELDLGYN 188

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVP 293
            +  LP  +  L +L++L ++ N+L ++P
Sbjct: 189 QLTALPEEIGKLQNLKDLYLNNNKLTTLP 217



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 25/130 (19%)

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  LPE +GK+  L+ L +  N +  LP  +  L +L+EL++ FN+L           
Sbjct: 4   NRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQL----------- 52

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                          ALP+ IG L+ L++L++ +N++  LP     L  L+ L +  N L
Sbjct: 53  --------------TALPKEIGKLQNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKL 98

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 99  TTLPKEIEKL 108


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N ++ LP S  
Sbjct: 89  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFP 148

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 149 ELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNE 208

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 209 IHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 268

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 269 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 326

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  +++N L   P  +    +QA  
Sbjct: 327 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCLRDNRLTRIPAEV----SQATE 382

Query: 377 QYMADLVEKR 386
            ++ DL   R
Sbjct: 383 LHVLDLAGNR 392



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/251 (37%), Positives = 137/251 (54%), Gaps = 3/251 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L  L
Sbjct: 166 LPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDL 225

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P  I
Sbjct: 226 WLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGI 285

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+   N
Sbjct: 286 GKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRN 345

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S   L
Sbjct: 346 KLVSLPKEIGGCCSLTVFCLRDNR--LTRIPAEVSQATELHVLDLAGNRLLHLPLSLTAL 403

Query: 348 SRLRVLRVQEN 358
            +L+ L + +N
Sbjct: 404 -KLKALWLSDN 413



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           W+     +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L  
Sbjct: 73  WVGWQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQI 132

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
            D  GN +  LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP +
Sbjct: 133 ADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDS 192

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           + Q   L EL +  N + +LPE++G +  L+ L +  N + +LP  + +L +L  LDVS 
Sbjct: 193 LTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSE 252

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++   
Sbjct: 253 NRLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGD 310

Query: 347 LSRLRVLRVQENPLEVPPRNI 367
              L  L + EN L   P++I
Sbjct: 311 CESLTELVLTENQLLTLPKSI 331



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 23/215 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LPDS+ +L  L  LDL  N I ++P +IG L  LK L L  N++ ELP  IG+L +L
Sbjct: 186 LTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNL 245

Query: 165 VYLDLRGNQISALPVALSRLVRLEEL-----------------------DLGSNNLSSLP 201
           + LD+  N++  LP  +S L  L +L                        +  N L+ LP
Sbjct: 246 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLP 305

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++G   SL +L++  N L  LP +IG+   L  L  D N+L +LP+ +G   +L V  +
Sbjct: 306 EAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCL 365

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
           R N + ++P  +S  + L  LD++ N L  +P SL
Sbjct: 366 RDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSL 400


>gi|170032991|ref|XP_001844363.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
 gi|261277883|sp|B0W6M9.1|SUR8_CULQU RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|167873320|gb|EDS36703.1| leucine-rich repeat protein SHOC-2 [Culex quinquefasciatus]
          Length = 628

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 162/350 (46%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG L +L +LDLS N +  +P  IG   +L  LDL  N ++++P++IG+L 
Sbjct: 272 NKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETIGNLA 331

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS------------- 209
           +L  L LR NQ++A+PV+L   + ++E ++  N++S LPD + + +S             
Sbjct: 332 NLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTTITLSRNAFH 391

Query: 210 ------------------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  LP  IG  S +
Sbjct: 392 SYPSGGPAQFTNVTSINMEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQM 451

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL    N L  LP+ +  +  LE+L +  N +K++P T+ +L  LR LD+  N LES+P
Sbjct: 452 VELNFGTNSLAKLPDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLP 511

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             +     L K+ + +N   L++LPR+IG+L  L  L +  N ++ LP+    L  L  L
Sbjct: 512 SEIGLLHDLQKLILQSNA--LQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESL 569

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  +V  G   V+QY+
Sbjct: 570 YINDNASLVKLPYELALCQNLAIMSIENCPLSALPPEVVGGGPSLVIQYL 619



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 127/222 (57%), Gaps = 2/222 (0%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           +LDL  + I  +P S+ D  SL+   L GN+IS+LPV +  L  L+ L L  N+L+SLPD
Sbjct: 151 RLDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPD 210

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           S+ +L +LK L +  N L E+P  I +  +L  L + +NR+K + + +  + +L +LS+R
Sbjct: 211 SLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLSLR 270

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N I +LP  +  L +L  LD+S N L+ +PE++     L  +++ +N  DL  +P +IG
Sbjct: 271 ENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHN--DLLDIPETIG 328

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           NL  L+ L +  NQ+  +P S R    +    V+ N +   P
Sbjct: 329 NLANLQRLGLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLP 370



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 155/300 (51%), Gaps = 9/300 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P S+   +SL+   L  N+I ++P  IG LS+LK L L+ N +  LPDS+ +L +L
Sbjct: 159 ITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKAL 218

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N++S +P  + +L  L  L L  N +  + D++ +L SL  L +  N + ELP
Sbjct: 219 KVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSLTMLSLRENKIHELP 278

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG   +L  L + +N LK LPEA+G    L  L +++N++  +P T+ +L++L+ L +
Sbjct: 279 AAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPETIGNLANLQRLGL 338

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLPDS 343
            +N+L ++P SL     + + N+  N   +  LP   + +L  L  + +S N     P  
Sbjct: 339 RYNQLTAIPVSLRNCIHMDEFNVEGN--SISQLPDGLLASLSNLTTITLSRNAFHSYPSG 396

Query: 344 F-RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
                + +  + ++ N ++      ++ G  +  + +  L  K +A T       +W +M
Sbjct: 397 GPAQFTNVTSINMEHNQIDK-----IQYGIFSRAKGLTKLNMKENALTSLPLDIGTWSQM 451



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 51/331 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG LS+L +L L+EN + ++P ++  L +LK LDL  N++ E+PD I  L 
Sbjct: 180 NKISSLPVEIGCLSNLKTLALNENSLTSLPDSLQNLKALKVLDLRHNKLSEIPDVIYKLH 239

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I  +   L  L  L  L L  N +  LP +IG L +L  L +  N L+ 
Sbjct: 240 TLTTLYLRFNRIKVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKH 299

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +PE +G +  L+ L +RYN +  +P ++ +   + E 
Sbjct: 300 LPEAIGNCVNLTALDLQHNDLLDIPETIGNLANLQRLGLRYNQLTAIPVSLRNCIHMDEF 359

Query: 283 DVSFNELESVPESLCFA-------------------------TTLVKMNIGNNFAD---- 313
           +V  N +  +P+ L  +                         T +  +N+ +N  D    
Sbjct: 360 NVEGNSISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINMEHNQIDKIQY 419

Query: 314 ------------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                             L +LP  IG    + EL+   N +  LPD    L  L +L +
Sbjct: 420 GIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKLPDDIHCLQNLEILIL 479

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             N L+  P  I  +    V+    DL E R
Sbjct: 480 SNNMLKRIPNTIGNLKKLRVL----DLEENR 506



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 132/252 (52%), Gaps = 3/252 (1%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           K  +++ LDLS++ I  +P ++   +SL +  L+ N+I  LP  IG L +L  L L  N 
Sbjct: 145 KEENILRLDLSKSSITVIPPSVKDCTSLIEFYLYGNKISSLPVEIGCLSNLKTLALNENS 204

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +++LP +L  L  L+ LDL  N LS +PD I  L +L  L +  N ++ +   +   SSL
Sbjct: 205 LTSLPDSLQNLKALKVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIKVVGDNLKNLSSL 264

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N++  LP A+G +  L  L + +N++K LP  + +  +L  LD+  N+L  +P
Sbjct: 265 TMLSLRENKIHELPAAIGHLRNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIP 324

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRV 352
           E++     L ++  G  +  L A+P S+ N   ++E ++  N I  LPD     LS L  
Sbjct: 325 ETIGNLANLQRL--GLRYNQLTAIPVSLRNCIHMDEFNVEGNSISQLPDGLLASLSNLTT 382

Query: 353 LRVQENPLEVPP 364
           + +  N     P
Sbjct: 383 ITLSRNAFHSYP 394



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +N+++  +D I++      +   L  L++ EN + ++P  IG  S + +L+   N + +L
Sbjct: 407 INMEHNQIDKIQY--GIFSRAKGLTKLNMKENALTSLPLDIGTWSQMVELNFGTNSLAKL 464

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I  L +L  L L  N +  +P  +  L +L  LDL  N L SLP  IG L  L+KLI
Sbjct: 465 PDDIHCLQNLEILILSNNMLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLI 524

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +++N L+ LP TIG  ++L  L V  N L+ LPE +G +  LE L +  N ++ +LP  +
Sbjct: 525 LQSNALQSLPRTIGHLTNLTYLSVGENNLQYLPEEIGTLENLESLYINDNASLVKLPYEL 584

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L  + +    L ++P
Sbjct: 585 ALCQNLAIMSIENCPLSALP 604


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  137 bits (346), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 130/253 (51%), Gaps = 25/253 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L +L+L  N+   +P  IG L SL++L L  N++  LP  +G L +L   
Sbjct: 59  LPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVF 118

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L  L+ LDL +N L++LP  +G L +L  L +  N L  LP   
Sbjct: 119 ELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKET 178

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +LR L +  N L  LP  +G++  L  L++ YN +  LP  +  L SLREL +  N
Sbjct: 179 GQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDN 238

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +                         L+ LP+ IG L+ L EL + + Q+  +P     L
Sbjct: 239 Q-------------------------LKTLPKEIGQLKNLRELLLRHKQLTTVPKEIGQL 273

Query: 348 SRLRVLRVQENPL 360
            +LR L +  NP+
Sbjct: 274 KKLRWLLLDANPI 286



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 130/250 (52%), Gaps = 25/250 (10%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS+ ++  +P  IG L +L+ L+L  N+   LP+ IG L SL  L L  NQ++ LP  
Sbjct: 49  LNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKE 108

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+  +L +N L++LP  IG L +L+ L +  N L  LP  +GQ  +L +L +  
Sbjct: 109 VGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHD 168

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L  LP+  G++  L +L++  N +  LP  +  L  L  L++++N+L +         
Sbjct: 169 NKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTT--------- 219

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                           LP+ IG L+ L EL + +NQ++ LP     L  LR L ++   L
Sbjct: 220 ----------------LPKEIGQLQSLRELYLGDNQLKTLPKEIGQLKNLRELLLRHKQL 263

Query: 361 EVPPRNIVEM 370
              P+ I ++
Sbjct: 264 TTVPKEIGQL 273



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 118/218 (54%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L   +++ LP  + +L  L+ L+L +N  ++LP+ IG L SL++
Sbjct: 35  DLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRE 94

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L  LP  +GQ  +L+   ++ N+L  LP  +GK+  L+ L +  N +  LP  
Sbjct: 95  LYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKE 154

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L +L +  N+L ++P+       L  +N+  N   L  LP  IG L+ L  L++
Sbjct: 155 VGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNL--LTILPNEIGQLKKLLSLNL 212

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + NQ+  LP     L  LR L + +N L+  P+ I ++
Sbjct: 213 TYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQL 250


>gi|388329668|gb|AFK29223.1| scribbled, partial [Drosophila buzzatii]
          Length = 499

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 99/276 (35%), Positives = 149/276 (53%), Gaps = 7/276 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP   G L+ L SL+L EN +  +P TI  L+ LK+LDL  N I +LP  +G L +L  L
Sbjct: 144 LPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPNLHEL 203

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+  LP  L  L +L  LD+  N L  LP+ IG ++SL  L +  N LE LP  I
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSLTDLDLAQNLLETLPDGI 263

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + S L  L++D NRL+ L E +G    ++ L +  N + +LP ++ +++ L  L+V  N
Sbjct: 264 SKLSRLTILKLDQNRLQRLNETLGNCENMQELILTENFLSELPASIGNMTKLSNLNVDRN 323

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +P  +   + L  +++ +N   L+ LP  +GN  +L  LD+S NQ+  LP S   L
Sbjct: 324 ALEYLPLEIGQCSNLGVLSLRDN--KLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL 381

Query: 348 SRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
            +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 382 -QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 3/277 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G   +L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +  + SL
Sbjct: 187 IEDLPPYLGYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIGGMVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLETLPDGISKLSRLTILKLDQN--RLQRLNETLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP S   +++L  L V  N LE  P  I +     V+
Sbjct: 305 LPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVL 341



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + IG   SL +L +  N L+ LP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEIGGMVSLTDLDLAQNLLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGNMTKLSNLNVDRNA--LEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L +L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ IG
Sbjct: 182 LGDNEIEDLPPYLGYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIG 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++SL  LDL  N +  LP  +S+L RL  L L  N L  L +++G+  ++++LI+  N 
Sbjct: 242 GMVSLTDLDLAQNLLETLPDGISKLSRLTILKLDQNRLQRLNETLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IG  + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGNMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 134/274 (48%), Gaps = 3/274 (1%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           K   R +   +K   ++  +P+ I + S +L  L L  N I  +P     L+ L+KL L 
Sbjct: 9   KGCNRQVEFVDKRHCSLPQVPEEILRYSRTLEELFLDANHIRDLPKNFFRLNRLRKLGLS 68

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
            N I  LP  I +  +LV LD+  N I  +P  +  L  L+  D  SN +  LP     L
Sbjct: 69  DNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQL 128

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L  L +    L  LP   G  + L  L +  N LK LPE + ++  L+ L +  N I+
Sbjct: 129 KNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE 188

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L +L EL +  N+L+ +P  L   T L  +++  N   L  LP  IG +  L
Sbjct: 189 DLPPYLGYLPNLHELWLDHNQLQRLPPELGLLTKLTYLDVSEN--RLEELPNEIGGMVSL 246

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            +LD++ N +  LPD    LSRL +L++ +N L+
Sbjct: 247 TDLDLAQNLLETLPDGISKLSRLTILKLDQNRLQ 280


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 167/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 121 NQLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLQILPEEITNLR 180

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LD+ +N L+++P S  SL SL +L + +N L+ 
Sbjct: 181 NLKGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKS 240

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 241 LPVEISGMKRLKHLDCNSNLLETVPPELANMESLELLYLRRNKLRFLP-EFPSCRLLKEL 299

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E + PE L    +++ +++ +N   LR++P  I  L+ LE LD+SNN I  LP
Sbjct: 300 HVGENQIEILGPEHLKHLNSILVLDLRDN--KLRSVPDEITLLQSLERLDLSNNDISSLP 357

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D   Q
Sbjct: 358 CSLGKLP-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPNQ 405



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 117/204 (57%), Gaps = 4/204 (1%)

Query: 96  NLQ--NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NLQ  N   + ++ LP+ I  L +L  L L  N +  +P     L +L+ LD+  NR+  
Sbjct: 158 NLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLTT 217

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P S   L SLV L++  NQ+ +LPV +S + RL+ LD  SN L ++P  + ++ SL+ L
Sbjct: 218 VPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVPPELANMESLELL 277

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTT 272
            +  N L  LP     C  L+EL V  N+++ L PE +  ++++ VL +R N ++ +P  
Sbjct: 278 YLRRNKLRFLPE-FPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDE 336

Query: 273 MSSLSSLRELDVSFNELESVPESL 296
           ++ L SL  LD+S N++ S+P SL
Sbjct: 337 ITLLQSLERLDLSNNDISSLPCSL 360



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 141/321 (43%), Gaps = 48/321 (14%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+ +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L  L +L 
Sbjct: 311 PEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL-PLKFLA 369

Query: 169 LRGNQISA--------------------------------------LP----VALSRLVR 186
           L GN +                                        LP    V +  ++ 
Sbjct: 370 LEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPNQSDSVVETAMTLPSESRVNVHAIIT 429

Query: 187 LEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RELRVDYNR 242
           L+ LD      + +PD +   +    +  +    N L E+P  I +   +  ++ + +N+
Sbjct: 430 LKILDYSDKQTTLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNK 489

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +P+ L    TL
Sbjct: 490 LSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPDVLYHIPTL 549

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             + I NN       P+ +  +E L  LD+ NN +  +P        LR L +  NP  V
Sbjct: 550 ETILISNNQVG-SVDPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRV 608

Query: 363 PPRNIVEMGAQAVVQYMADLV 383
           P   I+  G  A+++Y+ D +
Sbjct: 609 PRAAILMKGTAAILEYLRDRI 629



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 31/186 (16%)

Query: 108 LPDSIG---KLSSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLS 163
           +PD +    K + + S++ S+N++  +P  I  L  +   ++L  N++  +   +  L  
Sbjct: 443 IPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCMLQK 502

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV-------- 215
           L +LDLR N +++LP  +  L+RL+ ++L  N    LPD +  + +L+ +++        
Sbjct: 503 LTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPDVLYHIPTLETILISNNQVGSV 562

Query: 216 ----------------ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTL 256
                           + NDL ++P  +G C +LR L +D N  +    A+   G    L
Sbjct: 563 DPQKMKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAIL 622

Query: 257 EVLSVR 262
           E L  R
Sbjct: 623 EYLRDR 628


>gi|441637621|ref|XP_003260231.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 7 [Nomascus leucogenys]
          Length = 1578

 Score =  137 bits (346), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 122 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 181

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 182 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 241

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 242 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 301

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 302 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 359

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 360 HSLRTLAVDENFLPELPREI 379



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP S+  L  L
Sbjct: 165 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQL 224

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+   LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 225 ERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 284

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 285 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDC 344

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 345 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 402

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 403 GQMQKLRVLNLSDNRLK 419



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 246 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 305

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 306 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 365

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 366 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 425

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 426 TKLKELAALWLSDNQ 440



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 209 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 268

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 269 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 328

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 329 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 388

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 389 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 444



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 86  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 145

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 146 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILE 205

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 206 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 263

Query: 367 IVEM 370
           I ++
Sbjct: 264 IGKL 267


>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
           scrofa]
          Length = 602

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 167/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LDL +N LSS+P S  SL S+ +L + +N L+ 
Sbjct: 152 NLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 212 LPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLGAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q
Sbjct: 329 CSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGLSQ 376



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 144/328 (43%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L
Sbjct: 275 NQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL 334

Query: 162 LSLVYLDLRGNQISA--------------------------------------LP----V 179
             L +L L GN +                                        LP    V
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESRV 393

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
            +  ++ L+ LD      + +PD +   +    +  +    N L E+P  I +   +  +
Sbjct: 394 NIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKILPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIPTLETILISNNQVG-SVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAAILEYLRDRI 600



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 84  LTKLIISNNKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 141

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  L  L  L +  N L   P
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIP 190


>gi|194211222|ref|XP_001498354.2| PREDICTED: leucine-rich repeat-containing protein 7 [Equus
           caballus]
          Length = 1537

 Score =  137 bits (345), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP  +GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP +IG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 81/195 (41%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP +IGKL  L+ LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGNIGKLKMLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP +IG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGNIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L+YLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLIYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + +   +L EL +  N++E +P+ L     L K++I +
Sbjct: 19  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 78

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL  LP +I +L  L+ELDIS N ++  P++ +    L ++    NP+   P    +
Sbjct: 79  N--DLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 136

Query: 370 M 370
           +
Sbjct: 137 L 137


>gi|432885659|ref|XP_004074704.1| PREDICTED: protein LAP2-like [Oryzias latipes]
          Length = 1250

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 147/254 (57%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP S G+L+ L  L+L EN++  +P ++  L+ L++LDL +N   E+P+ +  L  +
Sbjct: 149 LEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGSNEFTEVPEVLEHLSGI 208

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L + GN+++ LP  + +L  LE LD+  NNL  + + I    +L+ L++  N L +LP
Sbjct: 209 KELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISGCENLQDLLLSNNALTQLP 268

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP++VG +  ++ L   +N I+ LP+++    ++R    
Sbjct: 269 ASIGSLKKLTALKVDENQLMFLPDSVGGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAA 328

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     L  + + +N   L +LP  +G+++ L+ +++SNN+++ LP SF
Sbjct: 329 DHNFLTELPPEMGNWKNLTVLFLHSN--KLESLPEEMGDMQKLKVINLSNNKLKNLPYSF 386

Query: 345 RMLSRLRVLRVQEN 358
             LS +  + + EN
Sbjct: 387 TKLSEMTAMWLSEN 400



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 161/338 (47%), Gaps = 33/338 (9%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    SL     SL  V  +  + +  LQ   +D   IE LP  +     
Sbjct: 10  LVPCRCLRGEEEVVTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNCQL 69

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L  L + +N +  +PA I  L +L++LD+  N I E PDSI +   L  ++   N++  L
Sbjct: 70  LNRLSVPDNDLAVLPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMPKL 129

Query: 178 P-----------------------VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P                        +  RL +L+ L+L  N L +LP S+  L  L++L 
Sbjct: 130 PEGFTLLLNLTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLD 189

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  +   S ++EL +D N+L  LP  VGK+  LE L +  NN++ +   +S
Sbjct: 190 LGSNEFTEVPEVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQIS 249

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
              +L++L +S N L  +P S+     L  + +  N   L  LP S+G L  ++ELD S 
Sbjct: 250 GCENLQDLLLSNNALTQLPASIGSLKKLTALKVDEN--QLMFLPDSVGGLTAIDELDCSF 307

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPPRNIVEMG 371
           N+I  LP S      +R      N L E+PP    EMG
Sbjct: 308 NEIEALPSSIGQWVAIRTFAADHNFLTELPP----EMG 341



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/232 (29%), Positives = 118/232 (50%), Gaps = 11/232 (4%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLIKLASLIEVSSKKGTRDLNL 97
           LT    L LGS  F  +VP ++  +  + +   DG KL++  L +++        ++L  
Sbjct: 182 LTQLERLDLGSNEF-TEVPEVLEHLSGIKELWMDGNKLTV--LPAMV-----GKLKNLEY 233

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            +   +N+E + + I    +L  L LS N +  +PA+IG L  L  L +  N+++ LPDS
Sbjct: 234 LDMSKNNLEMVDEQISGCENLQDLLLSNNALTQLPASIGSLKKLTALKVDENQLMFLPDS 293

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G L ++  LD   N+I ALP ++ + V +       N L+ LP  +G+  +L  L + +
Sbjct: 294 VGGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEMGNWKNLTVLFLHS 353

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           N LE LP  +G    L+ + +  N+LK LP +  K+  +  + +  N  K L
Sbjct: 354 NKLESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLSEMTAMWLSENQSKPL 405


>gi|334321689|ref|XP_001379482.2| PREDICTED: leucine-rich repeat-containing protein 7 [Monodelphis
           domestica]
          Length = 1571

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    L++L  L
Sbjct: 114 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQL 173

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 174 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 233

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 234 EQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSN 293

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 294 MLQQLPDSIGLLKKLTTLKVDDN--QLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYL 351

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 352 HSLRTLAVDENFLPELPREI 371



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/195 (43%), Positives = 117/195 (60%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 238 NLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQ 297

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP A+  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 298 LPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTL 357

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 358 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 417

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 418 TKLKELAALWLSDNQ 432



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 140/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L
Sbjct: 157 ISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQL 216

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L +LP SIG L  L  L +  N +E + 
Sbjct: 217 ERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVD 276

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP  + +LS L E D 
Sbjct: 277 LDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDC 336

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 337 SCNELESLPATIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 394

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 395 GQMQKLRVLNLSDNRLK 411



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 201 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLK 260

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 261 MLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTV 320

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 321 LPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 380

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 381 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 436



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 139/254 (54%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L  L  L+L EN +  +P ++  L+ L++LDL  N   ELP+ +  + +L
Sbjct: 180 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNL 239

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N +  LP ++ +L  L  LD+  N + ++   I    +L+ L++ +N L++LP
Sbjct: 240 RELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLP 299

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP A+G +  LE      N ++ LP T+  L SLR L V
Sbjct: 300 DSIGLLKKLTTLKVDDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAV 359

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  M++ +N   L  LP  IG ++ L  L++S+N+++ LP SF
Sbjct: 360 DENFLPELPREIGSCKNVTVMSLRSN--KLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 417

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 418 TKLKELAALWLSDN 431



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 94/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 78  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 137

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 138 PENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILE 197

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+  P +
Sbjct: 198 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGS 255

Query: 367 IVEM 370
           I ++
Sbjct: 256 IGKL 259


>gi|330864711|ref|NP_001179037.2| leucine-rich repeat-containing protein 7 [Bos taurus]
 gi|296489182|tpg|DAA31295.1| TPA: leucine rich repeat containing 7 [Bos taurus]
          Length = 1537

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/260 (35%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 84  LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 144 YLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 204 DQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 264 MLQQLPDSIGLLKKLTTLKVDDN--QLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYL 321

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 322 HSLRTLAVDENFLPELPREI 341



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/257 (35%), Positives = 141/257 (54%), Gaps = 2/257 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP S+  L  L
Sbjct: 127 ISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILELRENHLKTLPKSMHKLAQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S LP  L ++  L EL + +N L  LP SIG L  L  L +  N +E + 
Sbjct: 187 ERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVD 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D 
Sbjct: 247 MDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S NELES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+  
Sbjct: 307 SCNELESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEI 364

Query: 345 RMLSRLRVLRVQENPLE 361
             + +LRVL + +N L+
Sbjct: 365 GQMQKLRVLNLSDNRLK 381



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 208 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 268 LPDSIGLLKKLTTLKVDDNQLTILPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 406



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +LKKL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALKKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLAKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 168 LRENH--LKTLPKSMHKLAQLERLDLGNNEFSELPEVLDQIQNLRELWMDNNALQVLPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P    EM +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP---AEM-SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.058,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|170586680|ref|XP_001898107.1| PDZ-domain protein scribble [Brugia malayi]
 gi|158594502|gb|EDP33086.1| PDZ-domain protein scribble, putative [Brugia malayi]
          Length = 1245

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/308 (32%), Positives = 161/308 (52%), Gaps = 48/308 (15%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL+    +++  LP+ I     L  LDLS N I  +P TI  L+S+  L L+   + +
Sbjct: 87  ELNLKG---NDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQ 143

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L +L  L++R N +  +P ++S L +L  LDLG N L  LP+ IG L +L++L
Sbjct: 144 MPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEEL 203

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK------ 267
            V+ NDLE LP +I QC SL +L V  N+L  LP+ +G +  L+ L+V  N ++      
Sbjct: 204 YVDQNDLEALPESIVQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPRRL 263

Query: 268 -------------------------------------QLPTTMSSLSSLRELDVSFNELE 290
                                                ++P+++ +L SLR L++  N+L+
Sbjct: 264 KKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLK 323

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P ++   T+L  +++ +N   +  LP  IG LE L  LD+ NN++  LP +  +L +L
Sbjct: 324 ELPPTIGGCTSLSVLSLRDNL--IEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKL 381

Query: 351 RVLRVQEN 358
           R L + EN
Sbjct: 382 RALWLSEN 389



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 148/269 (55%), Gaps = 6/269 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           R +++ ++   N++ +P  I + + +L  + L  N I  +   +     LK L L  N +
Sbjct: 13  RQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           I LP  I  L  L  L+L+GN +S LP  +   ++L+ LDL SN ++ LP +I  L S+ 
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMT 132

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +    L ++PH IG   +LR L V  N L+ +P ++ +++ L  L + +N +  LP 
Sbjct: 133 SLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPN 192

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L EL V  N+LE++PES+    +L ++++  N   L  LP  IG+LE L++L 
Sbjct: 193 EIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSEN--KLMVLPDEIGDLEKLDDLT 250

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           ++ N ++VLP   R L +L +L+   N +
Sbjct: 251 VAQNCLQVLP---RRLKKLSILKADRNAI 276



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 116/201 (57%), Gaps = 6/201 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L+L +  +D+   LP+ IG L +L  L + +N + A+P +I    SL++LD+  N+++
Sbjct: 178 RRLDLGHNELDD---LPNEIGMLENLEELYVDQNDLEALPESIVQCRSLEQLDVSENKLM 234

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LPD IGDL  L  L +  N +  LP    RL +L  L    N ++ L  +IGS  +L +
Sbjct: 235 VLPDEIGDLEKLDDLTVAQNCLQVLP---RRLKKLSILKADRNAITQLTPAIGSCHALTE 291

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           + +  N L E+P ++G   SLR L +D N+LK LP  +G   +L VLS+R N I+QLP  
Sbjct: 292 IYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLE 351

Query: 273 MSSLSSLRELDVSFNELESVP 293
           +  L +LR LDV  N L  +P
Sbjct: 352 IGRLENLRVLDVCNNRLNYLP 372


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P    EM +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP---AEM-SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.048,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+S+G+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+S+G LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG+  +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE+VG +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGEC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++G+  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGECE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  LP  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRLPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  LP      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/281 (32%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGNLEM 326
            LE +PE +   T+L  + I  N  +                     L  LP ++G+ E 
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCES 290

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L EL ++ NQ+  LP S   L +L  L    N L   P+ I
Sbjct: 291 LTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEI 331



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           LP  + Q + L  L V  NRL  LP
Sbjct: 350 LPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 42.4 bits (98), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 2/92 (2%)

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N I 
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNDIP 95

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +P+S      L++     NPL   P +  E+
Sbjct: 96  EIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P    EM +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP---AEM-SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           K L +A+     +  L + +  +K LP  +  L +L++LD+  NE   + + +     L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           K+N+ NN   L  LP+ IG L+ L+EL + +N++  LP        L+ L +  N L V 
Sbjct: 91  KLNLNNN--KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL 148

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 149 PKEIGQL 155


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 102/295 (34%), Positives = 159/295 (53%), Gaps = 26/295 (8%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            LP  I  L++L  L+LS N++  +P  IG L++L +L+L +N++  LP  IG+L +L  L
Sbjct: 829  LPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLL 888

Query: 168  DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            DL GNQ++ LP  +  L  LE L L  N L++LP  IG+L +L +L +  N+   LP  I
Sbjct: 889  DLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENE-NVLPAEI 947

Query: 228  GQCSSLRELRVDY-----------------------NRLKALPEAVGKIHTLEVLSVRYN 264
            G  ++LR L ++                        N+L ALP  +GK+  L+ L +  N
Sbjct: 948  GNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKN 1007

Query: 265  NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             ++QLP  + +L++L EL +  N+L ++P+ +   T L K+++  N   L ALP  +G L
Sbjct: 1008 QLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKN--KLMALPPEMGRL 1065

Query: 325  EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
              L EL +  NQ+  LP     L+ L  L    N L  P   IV+ G QA++ Y+
Sbjct: 1066 TNLIELYLDYNQLTALPPEIGNLTNLTQLSFYNNQLISPSPEIVKQGTQAILAYL 1120



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 101/272 (37%), Positives = 152/272 (55%), Gaps = 8/272 (2%)

Query: 95   LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
            LNL  K +     LP  IG L+ L  L L+ N++  +P  IG L +L+ L L  NR+ +L
Sbjct: 749  LNLAGKQLTE---LPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKL 805

Query: 155  PDSIGDLLSLVYLDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
            P  IG+L  L  L L GN Q+  LP  +S L  L +L+L SN L  LP  IG+L +L +L
Sbjct: 806  PKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQL 865

Query: 214  IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
             + +N L+ LP  IG  ++L  L ++ N+L  LP  +G +  LEVL +  N +  LP  +
Sbjct: 866  NLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEI 925

Query: 274  SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             +L++L ELD+S NE   +P  +   T L ++ +  N   L  L   IGNL  L+ L + 
Sbjct: 926  GNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYL--NRKQLTVLVPEIGNLTNLKTLSLK 982

Query: 334  NNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
            +NQ+  LP     L++L+ L + +N L ++PP
Sbjct: 983  DNQLIALPPEIGKLTQLKWLDINKNQLRQLPP 1014



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/233 (35%), Positives = 127/233 (54%), Gaps = 4/233 (1%)

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
            P  I  L++   L+L   ++ ELP  IG+L  L +L L  NQ++ LP  +  L+ L  L
Sbjct: 736 APKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVL 795

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
            L +N L+ LP  IG+L  L+ L +  N  L+ LP  I   ++L +L +  N+LK LP+ 
Sbjct: 796 SLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLPKE 855

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G +  L  L++  N +K LP  + +L++L  LD++ N+L  +P  +   T L  + +  
Sbjct: 856 IGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLTNLEVLYLSR 915

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           N   L ALP+ IGNL  L ELD+S N+  VLP     L+ LR L +    L V
Sbjct: 916 N--QLTALPKEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTV 965



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 12/190 (6%)

Query: 101  LMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD 160
            L +N   LP  IG L++L  L L+  ++  +   IG L++LK L L  N++I LP  IG 
Sbjct: 936  LSENENVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGK 995

Query: 161  LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
            L  L +LD+  NQ+  LP  +  L  L EL L  N L++LP  IG+L +L KL +  N L
Sbjct: 996  LTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNKL 1055

Query: 221  EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN---------IKQLPT 271
              LP  +G+ ++L EL +DYN+L ALP  +G +  L  LS  YNN         +KQ   
Sbjct: 1056 MALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQLSF-YNNQLISPSPEIVKQ--G 1112

Query: 272  TMSSLSSLRE 281
            T + L+ LRE
Sbjct: 1113 TQAILAYLRE 1122



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/167 (31%), Positives = 79/167 (47%), Gaps = 24/167 (14%)

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P  I  L +   L +    L ELP  IG  + L  L ++ N+L  LP  +G +  L VLS
Sbjct: 737 PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLATLPPEIGNLINLRVLS 796

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N + +LP  + +LS LR L +S N                          L+ LP+ 
Sbjct: 797 LENNRLTKLPKEIGNLSHLRGLYLSGN------------------------YQLKVLPKK 832

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           I NL  L +L++S+NQ++VLP     L+ L  L +  N L+V P+ I
Sbjct: 833 ISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEI 879


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 154/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N +  +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  + LP  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 150/287 (52%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N L  + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR + LP  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQILPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 135/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NEL +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILPVEI 267



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ LP  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTEN--RLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE LP
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEA+G   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TTL-KLKALWLSDN 390



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTTLKLKAL--WLSD 389



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  LP  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENRLLTLPKSI 308



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP++IGD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 44.7 bits (104), Expect = 0.098,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L++     NPL   P +  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L  LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAIGDCDSLTELVLTEN--RLVT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L   +   N++  LP      S L V  V++N L   P    EM +QA  
Sbjct: 304 LPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSLTVFCVRDNRLTRIP---AEM-SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 127/232 (54%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LPDS+ +L  L  LDL  N I  +P +IG L  LK L L  N++ ELP  IG+L +L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L  +PD IG L  L  L V+ N L +LP
Sbjct: 223 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLP 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG C SL EL +  NRL  LP+++GK+  L   +   N +  LP  +   SSL    V
Sbjct: 283 EAIGDCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPKEIGGCSSLTVFCV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 343 RDNRLTRIPAEMSQATELHVLDVAGN--RLLHLPFSLTALK-LKALWLSDNQ 391



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 144/274 (52%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L  L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAIGDCDSLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L   N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLVTLPKSIGKLKKLSNFNADRN--KLTSLPKEIGGCSSLTVFCVRDNRLTRIPAEMSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPFSLTALKLKAL--WLSD 389



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LEMIPDGIGKLKKLSILKVDQNRLTQLPEAIGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 DSLTELVLTENRLVTLPKSI 308



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VETIDRRHCSLVYVPDEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L++     NPL   P +  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGGCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGGCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGGCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGGCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P    EM +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP---AEM-SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TAL-KLKALWLSDN 390



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENQLLTLPKSI 308



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEMSQATELHVLDVAGNRLLHLP 374



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N+I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNEI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L+V     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/260 (33%), Positives = 150/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L +L  L+L+ N +  +P  I  L  L+ LDL+ NR+  LP  IG L +L +L
Sbjct: 64  LPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWL 123

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ LP  +  L  L+ L+L  + L+ LP  IG L +LK L V  N +   P  I
Sbjct: 124 SLSKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEI 183

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L++L +  NR++ + E VGK+  LE L++  N +  LP  +  L +L+ L++ +N
Sbjct: 184 GKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYN 243

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +    +L ++++ +N  +L+ LP+ +G +  L+ L +++N+I  LP    +L
Sbjct: 244 KLANIPKEIGELRSLKELDLSDN--ELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELL 301

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L +  N  +V P+ I
Sbjct: 302 QNLRSLDLSGNQFKVLPKEI 321



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 75/208 (36%), Positives = 124/208 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +  LP  IG+LS+L  L++S N++   P  IG L +LK LDL  NRI  + + +G L 
Sbjct: 151 DRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLR 210

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  N+++ LP  + +L  L+ L+LG N L+++P  IG L SLK+L +  N+L+ 
Sbjct: 211 NLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKV 270

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +G  ++L+ L+++ NR+  LP+ +  +  L  L +  N  K LP  +  L +L+ L
Sbjct: 271 LPKELGTIANLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSL 330

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNN 310
           D+S N+  ++P  +     L K+NI +N
Sbjct: 331 DLSDNQFTTLPSEVGELRNLKKLNIDSN 358



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 137/245 (55%), Gaps = 2/245 (0%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LS   +  +P  +G L +L++L+L  N +  +P+ I  L  L  LDL GN++ ALP  + 
Sbjct: 56  LSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIG 115

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L  L L  N L++LP  I  L +L+ L +  + L  LP  IG+ S+L+ L V YN+
Sbjct: 116 QLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNK 175

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           +   PE +GK+  L+ L +  N I+ +   +  L +L  L++  N L  +P+ +     L
Sbjct: 176 VSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNL 235

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
             +N+G  +  L  +P+ IG L  L+ELD+S+N+++VLP     ++ L+ L++ +N +  
Sbjct: 236 QTLNLG--YNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVN 293

Query: 363 PPRNI 367
            P+ I
Sbjct: 294 LPKEI 298



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/296 (30%), Positives = 151/296 (51%), Gaps = 16/296 (5%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNL    + NI   P  IG+L SL  LDLS+N +  +P  +G +++L+ L
Sbjct: 228 EIGQLQNLQTLNLGYNKLANI---PKEIGELRSLKELDLSDNELKVLPKELGTIANLQSL 284

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ NRI+ LP  I  L +L  LDL GNQ   LP  + RL  L+ LDL  N  ++LP  +
Sbjct: 285 KLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEV 344

Query: 205 GSLISLKKLIVETNDL-----EELPHTIGQCS-----SLRELRVDYNRLKALPEAVGKIH 254
           G L +LKKL +++N L     +++ + +  C      + ++ ++ Y+ L    E   K+ 
Sbjct: 345 GELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEIDSSYAGKDDQIYYD-LNIASENPLKVL 403

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L +    Y +    P  +    +LR L +    LE +P+ +     L  + +G N   L
Sbjct: 404 NLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLN--RL 461

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP+ IG L+ L  L +  N+++ LP     L  LR L + +N  ++ P+ I ++
Sbjct: 462 KTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEIGQL 517



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 144/298 (48%), Gaps = 30/298 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P+ IGKL +L  LDLS NRI  V   +G L +L++L+L  NR+  LP  IG L 
Sbjct: 174 NKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQ 233

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  N+++ +P  +  L  L+ELDL  N L  LP  +G++ +L+ L +  N +  
Sbjct: 234 NLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVN 293

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I    +LR L +  N+ K LP+ +G++  L+ L +  N    LP+ +  L +L++L
Sbjct: 294 LPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKL 353

Query: 283 DVSFNEL-------------------------ESVPESLCFATT--LVKMNIGNNFADLR 315
           ++  N L                         + +   L  A+   L  +N+   + +  
Sbjct: 354 NIDSNPLLPGEKDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYE 413

Query: 316 A---LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +    P+ I     L  L + +  + ++P   R L  L  LR+  N L+  P+ I ++
Sbjct: 414 SFYNFPKKILEFRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQL 471



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/320 (30%), Positives = 161/320 (50%), Gaps = 38/320 (11%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KLA++  E+   +  ++L+L +   + ++ LP  +G +++L SL L++NRIV +P  I  
Sbjct: 244 KLANIPKEIGELRSLKELDLSD---NELKVLPKELGTIANLQSLKLNDNRIVNLPKEIEL 300

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L +L+ LDL  N+   LP  IG L +L  LDL  NQ + LP  +  L  L++L++ SN L
Sbjct: 301 LQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPL 360

Query: 198 ---------SSLPD------------------SIGSLISLK--KLIVETNDLE---ELPH 225
                    + LP+                  +I S   LK   L +E  + E     P 
Sbjct: 361 LPGEKDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPK 420

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I +  +LR L +    L+ +P+ + ++  LE L +  N +K LP  +  L +LR L + 
Sbjct: 421 KILEFRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLE 480

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            NEL+++P+ +     L  +N+  N    +  P+ IG L  L++LD+S NQ+  LP    
Sbjct: 481 ANELKTLPKEIEQLQNLRGLNLHQN--RFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIG 538

Query: 346 MLSRLRVLRVQENPLEVPPR 365
            L  L+ L + +NPL +  +
Sbjct: 539 QLQNLQELNLSDNPLSLKEK 558



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 118/246 (47%), Gaps = 36/246 (14%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP---DSIGDLL-- 162
           LP  IG+L +L SLDLS+N+   +P+ +G L +LKKL++ +N +  LP   D I +LL  
Sbjct: 317 LPKEIGRLQNLQSLDLSDNQFTTLPSEVGELRNLKKLNIDSNPL--LPGEKDKIQNLLPN 374

Query: 163 -----------SLVYLDLR---GNQISALPVALS---------------RLVRLEELDLG 193
                        +Y DL     N +  L ++L                    L  L L 
Sbjct: 375 CEIDSSYAGKDDQIYYDLNIASENPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLY 434

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
              L  +P  I  L +L+ L +  N L+ LP  IGQ  +LR L ++ N LK LP+ + ++
Sbjct: 435 DVGLEIIPKEIRRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQL 494

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L  L++  N  K  P  +  L  L++LD+S N+L ++P  +     L ++N+ +N   
Sbjct: 495 QNLRGLNLHQNRFKIFPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLS 554

Query: 314 LRALPR 319
           L+   R
Sbjct: 555 LKEKER 560



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/102 (34%), Positives = 60/102 (58%), Gaps = 2/102 (1%)

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP  + +L +L+EL+++FNEL ++PE +     L  +++  N   L ALP  IG L+ L 
Sbjct: 64  LPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDLYGN--RLEALPPEIGQLQNLS 121

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L +S NQ+  LP   ++L  L+ L + ++ L + P+ I E+
Sbjct: 122 WLSLSKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGEL 163


>gi|339247481|ref|XP_003375374.1| putative PDZ domain protein [Trichinella spiralis]
 gi|316971254|gb|EFV55056.1| putative PDZ domain protein [Trichinella spiralis]
          Length = 880

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 150/275 (54%), Gaps = 13/275 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL++L +L+  EN + ++PA+I  L +LK+LD+ +N    LP  IG L +L  L
Sbjct: 341 LPTDIGKLTNLEALEARENLLRSLPASIEQLKNLKRLDIGSNEFETLPLEIGQLENLQEL 400

Query: 168 DLRGNQISALPVALSRL-------VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
            +  N +  LP   S +       + L+ LD+  N + S PD +G L+SL  L    N +
Sbjct: 401 YVDCNDLECLPKVHSLIHCCSFIYLFLQSLDVSENKILSFPDDLGELVSLSDLTASQNCV 460

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
           E LPH+IG+   L  L++D NRL AL  A+G   +L  L +  N + +LP+++ +L  L 
Sbjct: 461 EVLPHSIGRLKKLTILKIDKNRLVALTPAIGSCASLCELVLTENLLTELPSSLGNLKKLT 520

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
             +V  N L  +P ++   + L  +++ NN   L  LP  IG L+ L  LD+S N++R L
Sbjct: 521 VFNVDRNRLSELPSTIGSCSNLTVLSLRNNL--LSILPFEIGKLQQLRVLDVSGNRLRSL 578

Query: 341 PDSFRMLSRLRVLRVQENPL----EVPPRNIVEMG 371
           P +   LS L+ + + +N L    +     +VE G
Sbjct: 579 PYTLNALSNLQAIWLSDNQLYLLGDTKGETVVENG 613



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 104/295 (35%), Positives = 142/295 (48%), Gaps = 32/295 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ +   + +L  L  L LS+N I  VPA I  LS L+ LDL  N I E+PDSI    
Sbjct: 244 NHIKEISKHVFRLHKLRRLALSDNEIYKVPADISNLSELEDLDLSKNDIQEIPDSIKQCR 303

Query: 163 SLVYLDLRGNQI-----------------------SALPVALSRLVRLEELDLGSNNLSS 199
           +L+Y+DL  N I                       + LP  + +L  LE L+   N L S
Sbjct: 304 NLLYVDLSSNPINRLPECVFQLGRLTSLGLNDISMTNLPTDIGKLTNLEALEARENLLRS 363

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT---- 255
           LP SI  L +LK+L + +N+ E LP  IGQ  +L+EL VD N L+ LP+    IH     
Sbjct: 364 LPASIEQLKNLKRLDIGSNEFETLPLEIGQLENLQELYVDCNDLECLPKVHSLIHCCSFI 423

Query: 256 ---LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
              L+ L V  N I   P  +  L SL +L  S N +E +P S+     L  + I  N  
Sbjct: 424 YLFLQSLDVSENKILSFPDDLGELVSLSDLTASQNCVEVLPHSIGRLKKLTILKIDKNR- 482

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L AL  +IG+   L EL ++ N +  LP S   L +L V  V  N L   P  I
Sbjct: 483 -LVALTPAIGSCASLCELVLTENLLTELPSSLGNLKKLTVFNVDRNRLSELPSTI 536



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 151/275 (54%), Gaps = 9/275 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ +PDSI +  +L+ +DLS N I  +P  +  L  L  L L+   +  LP  IG L 
Sbjct: 290 NDIQEIPDSIKQCRNLLYVDLSSNPINRLPECVFQLGRLTSLGLNDISMTNLPTDIGKLT 349

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+ R N + +LP ++ +L  L+ LD+GSN   +LP  IG L +L++L V+ NDLE 
Sbjct: 350 NLEALEARENLLRSLPASIEQLKNLKRLDIGSNEFETLPLEIGQLENLQELYVDCNDLEC 409

Query: 223 LP--HTIGQCSS-----LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           LP  H++  C S     L+ L V  N++ + P+ +G++ +L  L+   N ++ LP ++  
Sbjct: 410 LPKVHSLIHCCSFIYLFLQSLDVSENKILSFPDDLGELVSLSDLTASQNCVEVLPHSIGR 469

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L  L  L +  N L ++  ++    +L ++ +  N   L  LP S+GNL+ L   ++  N
Sbjct: 470 LKKLTILKIDKNRLVALTPAIGSCASLCELVLTENL--LTELPSSLGNLKKLTVFNVDRN 527

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++  LP +    S L VL ++ N L + P  I ++
Sbjct: 528 RLSELPSTIGSCSNLTVLSLRNNLLSILPFEIGKL 562



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 83/148 (56%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP SIG+L  L  L + +NR+VA+   IG  +SL +L L  N + ELP S+G+L  L
Sbjct: 460 VEVLPHSIGRLKKLTILKIDKNRLVALTPAIGSCASLCELVLTENLLTELPSSLGNLKKL 519

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
              ++  N++S LP  +     L  L L +N LS LP  IG L  L+ L V  N L  LP
Sbjct: 520 TVFNVDRNRLSELPSTIGSCSNLTVLSLRNNLLSILPFEIGKLQQLRVLDVSGNRLRSLP 579

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGK 252
           +T+   S+L+ + +  N+L  L +  G+
Sbjct: 580 YTLNALSNLQAIWLSDNQLYLLGDTKGE 607



 Score = 47.4 bits (111), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 3/129 (2%)

Query: 243 LKALPEAVGK-IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           L  +PE V +   +LEVL +  N+IK++   +  L  LR L +S NE+  VP  +   + 
Sbjct: 222 LNHVPEEVVRYTRSLEVLLLDSNHIKEISKHVFRLHKLRRLALSDNEIYKVPADISNLSE 281

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  +++  N  D++ +P SI     L  +D+S+N I  LP+    L RL  L + +  + 
Sbjct: 282 LEDLDLSKN--DIQEIPDSIKQCRNLLYVDLSSNPINRLPECVFQLGRLTSLGLNDISMT 339

Query: 362 VPPRNIVEM 370
             P +I ++
Sbjct: 340 NLPTDIGKL 348


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 56  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 115

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 116 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 175

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 176 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 235

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 236 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--QLLT 293

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P    EM +QA  
Sbjct: 294 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIP---AEM-SQATE 349

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 350 LHVLDVAGNR 359



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 130 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 189

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 190 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 249

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 250 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNA 309

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 310 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEMSQATELHVLDVAGNRLLHLPLSL 367

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 368 TAL-KLKALWLSDN 380



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 143/268 (53%), Gaps = 2/268 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 110 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 169

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 170 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 229

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 230 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 289

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 290 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEMSQA 347

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           + L VL V  N L   P ++  +  +A+
Sbjct: 348 TELHVLDVAGNRLLHLPLSLTALKLKAL 375



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 41  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVA 100

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 101 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 160

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 161 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 220

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 221 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 278

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 279 ESLTELVLTENQLLTLPKSI 298



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 55/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 220 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 279

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 280 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 339

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 340 IPAEMSQATELHVLDVAGNRLLHLP 364



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 59/118 (50%), Gaps = 3/118 (2%)

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           H +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  
Sbjct: 2   HHVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN-- 59

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +++ LP  I N   L ELD+S N+I  +P+S      L+V     NPL   P +  E+
Sbjct: 60  EIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPEL 117


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  N+L+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L A
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTEN--RLPA 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/232 (38%), Positives = 130/232 (56%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LPDS+ +L  L  LDL  N I  +P +IG L  LK L L  N++ ELP  IG+L +L
Sbjct: 163 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L ++PD IG L  L  L V+ N L +LP
Sbjct: 223 LCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLP 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C SL EL +  NRL ALP+++GK+  L  L+   N +  LP  +    SL    V
Sbjct: 283 ETVGDCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 343 RDNRLTRIPAEVSQATELHVLDVAGN--RLLHLPLSLTALK-LKALWLSDNQ 391



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 147/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP T+    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLPALPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 389



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 136/260 (52%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 KLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTQLPETVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENRLPALPKSI 308



 Score = 44.7 bits (104), Expect = 0.099,   Method: Compositional matrix adjust.
 Identities = 33/116 (28%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L++     NPL   P +  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 86  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 145

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 146 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 205

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 206 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 265

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 266 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 323

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 324 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 379

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 380 LHVLDVAGNR 389



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 160 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 219

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 220 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIP 279

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 280 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 339

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 340 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 397

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 398 TAL-KLKALWLSDN 410



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 140 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 199

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 200 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 259

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 260 SGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 319

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 320 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 377

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 378 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 409



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 71  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 130

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 131 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 190

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 191 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 250

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 251 RLERLPEEISGLTSLTDLVISQNL--LEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 308

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 309 ESLTELVLTENRLLTLPKSI 328



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 250 NRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 309

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 310 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 369

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 370 IPAEVSQATELHVLDVAGNRLLHLP 394



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N I
Sbjct: 57  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNDI 114

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L++     NPL   P +  E+
Sbjct: 115 PEIPESISFCKALQIADFSGNPLTRLPESFPEL 147


>gi|347971997|ref|XP_313783.5| AGAP004485-PA [Anopheles gambiae str. PEST]
 gi|333469123|gb|EAA44595.5| AGAP004485-PA [Anopheles gambiae str. PEST]
          Length = 595

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/350 (28%), Positives = 160/350 (45%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG L +L +LDLS N +  +P  IG   +L  LDL  N ++++P+SIG+L 
Sbjct: 239 NKIHELPAAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESIGNLS 298

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS------------- 209
           +L+ L LR NQ++++PV+L     ++E ++  N +S LPD + + +S             
Sbjct: 299 NLMRLGLRYNQLTSIPVSLKNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFH 358

Query: 210 ------------------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  LP  IG  + +
Sbjct: 359 SYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 418

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL    N L  LP+ +  +  LE+L +  N +K++P T+ +L  LR LD+  N LES+P
Sbjct: 419 VELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLP 478

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             +     L K+ + +N   L ALPR+IG+L  L  L +  N ++ LP+    L  L  L
Sbjct: 479 SEIGLLHDLQKLILQSN--QLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 536

Query: 354 RVQENP------------------------LEVPPRNIVEMGAQAVVQYM 379
            + +NP                        L   P  +V  G   V+QY+
Sbjct: 537 YINDNPSLIKLPYELALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYL 586



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/300 (29%), Positives = 154/300 (51%), Gaps = 9/300 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P S+   +SLV   L  N+I ++P  IG L++LK L L+ N +  LPDS+ +L  L
Sbjct: 126 ITVIPASVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLKQL 185

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N++S +P  + +L  L  L L  N +  + D++ +L SL  L +  N + ELP
Sbjct: 186 KVLDLRHNKLSDIPDVIYKLHTLTTLYLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELP 245

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG   +L  L + +N LK LPEA+G    L  L +++N++  +P ++ +LS+L  L +
Sbjct: 246 AAIGHLVNLTTLDLSHNHLKHLPEAIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGL 305

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLPDS 343
            +N+L S+P SL   T + + N+  N   +  LP   + +L  L  + +S N     P  
Sbjct: 306 RYNQLTSIPVSLKNCTHMDEFNVEGN--GISQLPDGLLASLSNLTTITLSRNAFHSYPSG 363

Query: 344 F-RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
                + +  + ++ N ++      ++ G  +  + +  L  K +A T       +W +M
Sbjct: 364 GPAQFTNVTSINLEHNQIDK-----IQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 418



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/331 (28%), Positives = 150/331 (45%), Gaps = 51/331 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L++L +L L+EN + ++P ++  L  LK LDL  N++ ++PD I  L 
Sbjct: 147 NKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLKQLKVLDLRHNKLSDIPDVIYKLH 206

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I  +   L  L  L  L L  N +  LP +IG L++L  L +  N L+ 
Sbjct: 207 TLTTLYLRFNRIRVVGDNLKNLSSLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKH 266

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +PE++G +  L  L +RYN +  +P ++ + + + E 
Sbjct: 267 LPEAIGNCVNLTALDLQHNDLLDIPESIGNLSNLMRLGLRYNQLTSIPVSLKNCTHMDEF 326

Query: 283 DVSFNELESVPESLCFA-------------------------TTLVKMNIGNNFAD---- 313
           +V  N +  +P+ L  +                         T +  +N+ +N  D    
Sbjct: 327 NVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQY 386

Query: 314 ------------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                             L +LP  IG    + EL+   N +  LPD    L  L +L +
Sbjct: 387 GIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILIL 446

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             N L+  P  I  +    V+    DL E R
Sbjct: 447 SNNLLKRIPNTIGNLKKLRVL----DLEENR 473



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I++      +   L  L++ EN + ++P  IG  + + +L+   N + +L
Sbjct: 374 INLEHNQIDKIQY--GIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 431

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I  L +L  L L  N +  +P  +  L +L  LDL  N L SLP  IG L  L+KLI
Sbjct: 432 PDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLI 491

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +++N L  LP TIG  ++L  L V  N L+ LPE +G +  LE L +  N ++ +LP  +
Sbjct: 492 LQSNQLSALPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNPSLIKLPYEL 551

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L  + +    L ++P
Sbjct: 552 ALCQNLAIMSIENCPLSALP 571


>gi|428164457|gb|EKX33482.1| hypothetical protein GUITHDRAFT_81382, partial [Guillardia theta
           CCMP2712]
          Length = 566

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 149/268 (55%), Gaps = 5/268 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R++ L N  + N   LP+ + +L  L  L +S N+I A+P     L+SL +L L  N I 
Sbjct: 180 REVRLSNNSLSN---LPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPIT 236

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP +IG    L  LDL  NQ+  LP A+ +L +L+ L L SNNL  LP+SI  L +L++
Sbjct: 237 ALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEE 296

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N LE LP  +   ++L+ + ++ N+L+ +P  +  +  L  L V YN +  LPT 
Sbjct: 297 LCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTN 356

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L  L++  N+L  +  ++   T L  + +  +F  ++ LP  IGNL  LE+L I
Sbjct: 357 IGLLPALSRLNLEGNQLSLLSPAIGMLTLLEALKV--DFNMIQILPPEIGNLRNLEDLSI 414

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            NNQ++ LP     L++LR L +  N L
Sbjct: 415 CNNQVKTLPPELFKLTKLRRLAISNNSL 442



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 144/283 (50%), Gaps = 23/283 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I  + SL SL LS+N+I  +P  IG L++L +L L+ N++  LP  +G+L +L  L
Sbjct: 6   FPKDIFSIPSLKSLSLSDNQIKVIPKEIGMLTALFQLRLNGNQLSSLPSEMGNLTNLQTL 65

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK--KLIVETNDLEELPH 225
            ++ N+   +P  +  L  L  L +  N  S LP     + SLK   L +  N L++LP 
Sbjct: 66  WVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDLHLWLSFNQLKKLPQ 125

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IGQ + L  L V+ N++ +LP  +G++ TL  L    N I Q+P  +  L  LRE+ +S
Sbjct: 126 AIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLLVELREVRLS 185

Query: 286 FNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNL 324
            N L ++P  +C    L ++ I NN                        + ALP +IG  
Sbjct: 186 NNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIF 245

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             L+ LD+ +NQ++ LP +   L++L+ L +Q N L   P +I
Sbjct: 246 TELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSI 288



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 151/261 (57%), Gaps = 2/261 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + ++ LP +IG+L+ L+ L++  N+I ++P  IG L++L++L  + N I ++P  IG L
Sbjct: 117 FNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPPVIGLL 176

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           + L  + L  N +S LP  + +L  L++L + +N + +LP++   L SL +L +  N + 
Sbjct: 177 VELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLSGNPIT 236

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG  + L+ L ++ N+LK LP A+G++  L+ L ++ NN+  LP ++  L +L E
Sbjct: 237 ALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSNNLHDLPNSIRKLKNLEE 296

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N+LES+P  L     L  +++ NN   LR +P  I  +  L  L ++ NQ+  LP
Sbjct: 297 LCLHDNQLESLPSGLWTLNNLKTISLENN--QLRRIPPEIAGMAYLSRLQVAYNQLTSLP 354

Query: 342 DSFRMLSRLRVLRVQENPLEV 362
            +  +L  L  L ++ N L +
Sbjct: 355 TNIGLLPALSRLNLEGNQLSL 375



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/295 (30%), Positives = 154/295 (52%), Gaps = 27/295 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL---------------------DL 146
           LP  +G L++L +L +  N+ V VP+ I  L+ L  L                     DL
Sbjct: 52  LPSEMGNLTNLQTLWVQNNKFVDVPSEIQTLTGLTALSISGNKFSYLPSFFCDMTSLKDL 111

Query: 147 HA----NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           H     N++ +LP +IG L  L+ L++  NQIS+LP  + +L  L EL    N ++ +P 
Sbjct: 112 HLWLSFNQLKKLPQAIGQLAGLIRLNVENNQISSLPPQIGQLTTLRELWANDNAITQIPP 171

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG L+ L+++ +  N L  LP+ + Q   L++LR+  N+++ALP     + +L  LS+ 
Sbjct: 172 VIGLLVELREVRLSNNSLSNLPNEVCQLGELKQLRISNNQIRALPNNFHLLTSLTELSLS 231

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N I  LP  +   + L+ LD+  N+L+++P ++   T L  +++ +N  +L  LP SI 
Sbjct: 232 GNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLTKLQTLHLQSN--NLHDLPNSIR 289

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
            L+ LEEL + +NQ+  LP     L+ L+ + ++ N L   P  I  M   + +Q
Sbjct: 290 KLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQ 344



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/291 (33%), Positives = 150/291 (51%), Gaps = 25/291 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP++   L+SL  L LS N I A+P  IG  + LK LDL +N++  LP +IG L 
Sbjct: 210 NQIRALPNNFHLLTSLTELSLSGNPITALPVNIGIFTELKNLDLESNQLKTLPAAIGQLT 269

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L+ N +  LP ++ +L  LEEL L  N L SLP  + +L +LK + +E N L  
Sbjct: 270 KLQTLHLQSNNLHDLPNSIRKLKNLEELCLHDNQLESLPSGLWTLNNLKTISLENNQLRR 329

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPE-----------------------AVGKIHTLEVL 259
           +P  I   + L  L+V YN+L +LP                        A+G +  LE L
Sbjct: 330 IPPEIAGMAYLSRLQVAYNQLTSLPTNIGLLPALSRLNLEGNQLSLLSPAIGMLTLLEAL 389

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V +N I+ LP  + +L +L +L +  N+++++P  L   T L ++ I NN   L ++  
Sbjct: 390 KVDFNMIQILPPEIGNLRNLEDLSICNNQVKTLPPELFKLTKLRRLAISNN--SLNSISG 447

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            I  L  L+ L  + N+IR+LP S  +L+ L  L + +N L   P  +  M
Sbjct: 448 EISLLTGLQSLVTTGNRIRILPPSLGLLTNLTELYLHDNSLTHFPEEVGTM 498



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/270 (30%), Positives = 144/270 (53%), Gaps = 3/270 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +E LP  +  L++L ++ L  N++  +P  I G++ L +L +  N++  LP +IG
Sbjct: 299 LHDNQLESLPSGLWTLNNLKTISLENNQLRRIPPEIAGMAYLSRLQVAYNQLTSLPTNIG 358

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L GNQ+S L  A+  L  LE L +  N +  LP  IG+L +L+ L +  N 
Sbjct: 359 LLPALSRLNLEGNQLSLLSPAIGMLTLLEALKVDFNMIQILPPEIGNLRNLEDLSICNNQ 418

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           ++ LP  + + + LR L +  N L ++   +  +  L+ L    N I+ LP ++  L++L
Sbjct: 419 VKTLPPELFKLTKLRRLAISNNSLNSISGEISLLTGLQSLVTTGNRIRILPPSLGLLTNL 478

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            EL +  N L   PE +    +L  + + NN   L+ +      +  L  + +++N+I++
Sbjct: 479 TELYLHDNSLTHFPEEVGTMYSLKTITLNNN--KLKEISAGFMRVTSLTSMQLADNKIQI 536

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           +P     +S+L  L +  NPL  PP  I+E
Sbjct: 537 VPTWMWKVSKLSSLNLDGNPLSSPPERILE 566


>gi|427798975|gb|JAA64939.1| hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 1144

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 146/263 (55%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ +P++I  L SL S D S N +  +PA    L SL  L L+   + +LP   G L 
Sbjct: 93  NDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGSLS 152

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +LV L+LR N +  LP++ + LV+LE LDLGSN+   LP  +G L SL++L +++N+L  
Sbjct: 153 NLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVVGQLSSLQELWLDSNELST 212

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ   L  L V  N+L  LP+ +  + +L  L    N ++ LP  +  L  L   
Sbjct: 213 LPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNYLESLPEDIGRLRKLTIF 272

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N L S+PES+    +L ++ + +N   L  LP SIG L  L  L+   NQ+  LP 
Sbjct: 273 KVDQNRLGSLPESIGDCVSLQELILTDNL--LTELPASIGRLVNLNNLNADCNQLSELPP 330

Query: 343 SFRMLSRLRVLRVQENPLE-VPP 364
               L RL VL ++EN L+ +PP
Sbjct: 331 EIGQLVRLGVLSLRENCLQRLPP 353



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/263 (37%), Positives = 137/263 (52%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  I  L +LV LD+S+N I  +P  I  L SL+  D  +N + +LP     L 
Sbjct: 70  NEISQLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLR 129

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L    ++ LP     L  L  L+L  N L  LP S   L+ L++L + +ND EE
Sbjct: 130 SLTVLGLNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEE 189

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +GQ SSL+EL +D N L  LP+ +G++  L  L V  N +  LP  +  L SL +L
Sbjct: 190 LPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDL 249

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
             S N LES+PE +     L    +  N   L +LP SIG+   L+EL +++N +  LP 
Sbjct: 250 HFSQNYLESLPEDIGRLRKLTIFKVDQNR--LGSLPESIGDCVSLQELILTDNLLTELPA 307

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
           S   L  L  L    N L E+PP
Sbjct: 308 SIGRLVNLNNLNADCNQLSELPP 330



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/191 (40%), Positives = 112/191 (58%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++ E LP  +G+LSSL  L L  N +  +P  IG L  L  LD+  N++  LPD + DL 
Sbjct: 185 NDFEELPVVVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLE 244

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L    N + +LP  + RL +L    +  N L SLP+SIG  +SL++LI+  N L E
Sbjct: 245 SLTDLHFSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESIGDCVSLQELILTDNLLTE 304

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG+  +L  L  D N+L  LP  +G++  L VLS+R N +++LP    +L  L  L
Sbjct: 305 LPASIGRLVNLNNLNADCNQLSELPPEIGQLVRLGVLSLRENCLQRLPPETGTLRRLHVL 364

Query: 283 DVSFNELESVP 293
           DVS N L+++P
Sbjct: 365 DVSGNRLQNLP 375



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/276 (32%), Positives = 143/276 (51%), Gaps = 3/276 (1%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           R +   +K   N+  +PD + + + +L  L L  N I  +P  +  L+ L++L ++ N I
Sbjct: 13  RQVEYIDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEI 72

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
            +LP  I +L++LV LD+  N I  +P  +  L  L+  D  SN LS LP     L SL 
Sbjct: 73  SQLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLT 132

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +    L +LPH  G  S+L  L +  N LK LP +   +  LE L +  N+ ++LP 
Sbjct: 133 VLGLNDVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPV 192

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  LSSL+EL +  NEL ++P+ +     L+ +++  N   L  LP  + +LE L +L 
Sbjct: 193 VVGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSEN--KLSHLPDELCDLESLTDLH 250

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            S N +  LP+    L +L + +V +N L   P +I
Sbjct: 251 FSQNYLESLPEDIGRLRKLTIFKVDQNRLGSLPESI 286



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 123/242 (50%), Gaps = 10/242 (4%)

Query: 147 HANRIIELPDSIGDLL----SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           H+N +  +PD   D+L    +L  L L  N I  LP  L RL +L  L +  N +S LP 
Sbjct: 22  HSN-LFNIPD---DVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDNEISQLPA 77

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            I +L++L  L V  ND++E+P  I    SL+      N L  LP    ++ +L VL + 
Sbjct: 78  DIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLN 137

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
             ++ QLP    SLS+L  L++  N L+ +P S  F   L ++++G+N  D   LP  +G
Sbjct: 138 DVSLTQLPHDFGSLSNLVSLELRENYLKGLPLSFAFLVKLERLDLGSN--DFEELPVVVG 195

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
            L  L+EL + +N++  LP     L RL  L V EN L   P  + ++ +   + +  + 
Sbjct: 196 QLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSHLPDELCDLESLTDLHFSQNY 255

Query: 383 VE 384
           +E
Sbjct: 256 LE 257



 Score = 48.1 bits (113), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 60/116 (51%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPT-TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R++N+  +P   +    +L EL +  N +  +P  L   T L ++++ +N  ++
Sbjct: 15  VEYIDKRHSNLFNIPDDVLRYARTLEELLLDANHIRDLPRGLFRLTKLRRLSVNDN--EI 72

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP  I NL  L +LD+S N I+ +P++ + L  L+      NPL   P   V++
Sbjct: 73  SQLPADIANLMNLVDLDVSKNDIQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQL 128


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 147/269 (54%), Gaps = 8/269 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + +L  L +LDLS N++ ++P  +  L +L  L L  N+   +P  +  L++L  L
Sbjct: 52  VPPELAQLRKLTALDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLREL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D   NQ++++P  L+ L  L +LDL  N L+S+P  +  L +LK+L +  N L  +P  +
Sbjct: 112 DCHSNQLTSVPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQEL 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L  L +  N+L  +P A+  +  LEVLS+R N +  LP  ++ L++LREL +  N
Sbjct: 172 AQLRNLTLLSLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L +VP  L     L  +++  N   L +LP     L+ L+EL +S NQ+  LP  F  L
Sbjct: 232 KLINVPPELAHLEHLTLLSLSYN--QLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQL 289

Query: 348 SRLRVLRVQENPL-EVPP-----RNIVEM 370
             L  L ++ N L  +PP     +N+ E+
Sbjct: 290 KNLTWLYLRSNQLANLPPEFAQLKNLTEL 318



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 132/264 (50%), Gaps = 26/264 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +  L +L  LDL +N++ +VP  +  L +LK+L L AN++  +P  +  L +L  L
Sbjct: 121 VPPELAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++ +P AL+ L  LE L L +N L+SLP  +  L                    
Sbjct: 181 SLSANQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHL-------------------- 220

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              ++LREL +  N+L  +P  +  +  L +LS+ YN +  LP   + L +L+EL +S N
Sbjct: 221 ---ANLRELYLRSNKLINVPPELAHLEHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGN 277

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI-RVLPDSFRM 346
           +L S+P        L  + + +N   L  LP     L+ L ELD+ +NQ+  + P+    
Sbjct: 278 QLTSLPPEFAQLKNLTWLYLRSN--QLANLPPEFAQLKNLTELDLRDNQLSNISPEILAQ 335

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
            +   +  +QE   EV P+ I +M
Sbjct: 336 GTAAILGHLQEQLQEVRPQWISKM 359



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 3/137 (2%)

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
           Q     EL +    L  +P A+ K+  L ++S+  N +  +P  ++ L  L  LD+S N+
Sbjct: 12  QAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTALDLSNNQ 71

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L S+P  L     L  + + NN      +P  + +L  L ELD  +NQ+  +P     L 
Sbjct: 72  LTSLPPELAQLKNLTLLYLSNN--QFTNIPLELTHLVNLRELDCHSNQLTSVPPELAHLE 129

Query: 349 RLRVLRVQENPL-EVPP 364
            L  L +++N L  VPP
Sbjct: 130 NLNKLDLRDNQLTSVPP 146


>gi|257061785|ref|YP_003139673.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
 gi|256591951|gb|ACV02838.1| small GTP-binding protein [Cyanothece sp. PCC 8802]
          Length = 937

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL SL +L L+ N +  +P  IG LS+L +L L  N++  LP   G+L+ L  L
Sbjct: 57  LPPEIGKLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTEL 116

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP    RL+ LE L L +N L+ LP+  G+L  L  L +++N LE L   I
Sbjct: 117 YLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEI 176

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L +L + YN+L  LP  + ++ +L  L+  YN +  LP  +  LS+L  L++S N
Sbjct: 177 RDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHN 236

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++E +P  +     L  +N+  N  +L  LP  IG L  L +L +S+N +  +P     L
Sbjct: 237 KIEKLPREIGQLKNLNTLNLIYN--NLYYLPSEIGELSQLIDLRLSHNYLDNIPSEIEKL 294

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L  L +  N L++ P  I+++
Sbjct: 295 RKLTTLYLGYNKLKILPTGIIQL 317



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           + ++ LDL   R+  LP  IG L + L +LDLR N++  LP  + +L  L  L L +N L
Sbjct: 18  NKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYL 77

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
             LP  IG+L +L +L +  N L  LP   G    L EL +  N+L +LP   G++  LE
Sbjct: 78  EELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLE 137

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            LS+  N +  LP    +L  L  LD+  N+LES+   +     L K+NI  N   L  L
Sbjct: 138 RLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYN--QLTNL 195

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P  I  +E L EL+ S NQ+  LP     LS L +L +  N +E  PR I ++
Sbjct: 196 PPQISEVESLIELNASYNQLTSLPGELGELSNLDLLNLSHNKIEKLPREIGQL 248



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/231 (31%), Positives = 121/231 (52%), Gaps = 3/231 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G  +L L N  +++   LP   G+L +L  L LS N++  +P   G L  L  LDL +N+
Sbjct: 112 GLTELYLANNQLNS---LPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNK 168

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  L   I DL  L  L++  NQ++ LP  +S +  L EL+   N L+SLP  +G L +L
Sbjct: 169 LESLNPEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTSLPGELGELSNL 228

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             L +  N +E+LP  IGQ  +L  L + YN L  LP  +G++  L  L + +N +  +P
Sbjct: 229 DLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHNYLDNIP 288

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           + +  L  L  L + +N+L+ +P  +       ++ I +   +L ++P  I
Sbjct: 289 SEIEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLLSIPPEI 339



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 84/161 (52%), Gaps = 3/161 (1%)

Query: 236 LRVDYNRLKALPEAVGKI-HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           L + + RL +LP  +G++ + L+ L +R N +K LP  +  L SL  L ++ N LE +P 
Sbjct: 23  LDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGKLQSLNALFLTTNYLEELPP 82

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +   +TL ++++  N   L  LP+  GNL  L EL ++NNQ+  LP  F  L  L  L 
Sbjct: 83  EIGNLSTLHRLSLTEN--KLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLS 140

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQ 395
           +  N L + P     +   + +   ++ +E  + + + +KQ
Sbjct: 141 LSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQ 181



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP  IG+L +L +L+L  N +  +P+ IG LS L  L L  N +  +P  I  L 
Sbjct: 236 NKIEKLPREIGQLKNLNTLNLIYNNLYYLPSEIGELSQLIDLRLSHNYLDNIPSEIEKLR 295

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEEL---DLGSNNLSSLPDSIGS 206
            L  L L  N++  LP  + +LVR  +L   DL  N LS  P+ I S
Sbjct: 296 KLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLLSIPPEIIWS 342


>gi|308504609|ref|XP_003114488.1| CRE-LET-413 protein [Caenorhabditis remanei]
 gi|308261873|gb|EFP05826.1| CRE-LET-413 protein [Caenorhabditis remanei]
          Length = 772

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 147/283 (51%), Gaps = 2/283 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L+ L+ L+L+ N I  +P T+     L  L+L+ N    LP+SI +  
Sbjct: 69  NEVSVLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECS 128

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           S+  L L    +++LP  +  LV L  L+   N+L ++P SI  L  L++L +  N++E+
Sbjct: 129 SITILSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIED 188

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+ +SLRE   D N L  LP+++     L+ L V  N I +LP  + S+SSL +L
Sbjct: 189 LPAKIGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDL 248

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           +VS N++  +P S+     L  + +  N  +L  L   IG+   L EL +  N +  LPD
Sbjct: 249 NVSMNDIPELPRSIGNLKRLQMLKVERN--NLTQLTPEIGHCSALTELYLGQNMLTDLPD 306

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           S   L  L  L V  N L   P  I    +  V+    +L+ +
Sbjct: 307 SIGDLKNLTTLNVDCNNLIEIPETIGSCKSLTVLSLRQNLISE 349



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 152/277 (54%), Gaps = 5/277 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DLNL    M+NI+ L   +  L  L  LD+S+N +  +P  IG L+ L +L+L+ N I +
Sbjct: 40  DLNLT---MNNIKELDRRLFTLRHLRILDVSDNEVSVLPPDIGQLTQLIELNLNRNTITD 96

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P+++ +   L  L+L GN  + LP ++     +  L L    L+SLP +IGSL++L+ L
Sbjct: 97  IPETLKNCKFLTNLNLNGNPFTRLPESICECSSITILSLNDTTLTSLPANIGSLVNLRVL 156

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
               N L+ +P +I +   L EL +  N ++ LP  +GK+ +L       NN+  LP ++
Sbjct: 157 EARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKIGKLTSLREFYADMNNLGTLPDSI 216

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           S    L +LDVS N++  +PE+L   ++L  +N+  N  D+  LPRSIGNL+ L+ L + 
Sbjct: 217 SDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMN--DIPELPRSIGNLKRLQMLKVE 274

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            N +  L       S L  L + +N L   P +I ++
Sbjct: 275 RNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDL 311



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 151/285 (52%), Gaps = 22/285 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL--V 165
           LP +IG L +L  L+  EN +  +P +I  L  L++LDL  N I +LP  IG L SL   
Sbjct: 143 LPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAKIGKLTSLREF 202

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           Y D+  N +  LP ++S    L++LD+  N ++ LP+++GS+ SL  L V  ND+ ELP 
Sbjct: 203 YADM--NNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELPR 260

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           +IG    L+ L+V+ N L  L   +G    L  L +  N +  LP ++  L +L  L+V 
Sbjct: 261 SIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVD 320

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N L  +PE++    +L  +++  N   +  LP +IG  E +  LD+++N++  LP + +
Sbjct: 321 CNNLIEIPETIGSCKSLTVLSLRQNL--ISELPMTIGKCENMTVLDVASNKLTSLPFTVK 378

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
           +L +L+ L + EN                  Q +  L E RDAKT
Sbjct: 379 VLYKLQALWLSENQ----------------TQSILKLSEIRDAKT 407



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 109/191 (57%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M+N+  LPDSI     L  LD+SEN+I  +P  +G +SSL  L++  N I ELP SIG+L
Sbjct: 206 MNNLGTLPDSISDCRMLDQLDVSENQINRLPENLGSMSSLTDLNVSMNDIPELPRSIGNL 265

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  L +  N ++ L   +     L EL LG N L+ LPDSIG L +L  L V+ N+L 
Sbjct: 266 KRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTDLPDSIGDLKNLTTLNVDCNNLI 325

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E+P TIG C SL  L +  N +  LP  +GK   + VL V  N +  LP T+  L  L+ 
Sbjct: 326 EIPETIGSCKSLTVLSLRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQA 385

Query: 282 LDVSFNELESV 292
           L +S N+ +S+
Sbjct: 386 LWLSENQTQSI 396



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 138/268 (51%), Gaps = 2/268 (0%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R ++  ++   N++ +P  I +   L  L+L+ N I  +   +  L  L+ LD+  N + 
Sbjct: 13  RQVDSLDRSQSNLQSVPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRHLRILDVSDNEVS 72

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LP  IG L  L+ L+L  N I+ +P  L     L  L+L  N  + LP+SI    S+  
Sbjct: 73  VLPPDIGQLTQLIELNLNRNTITDIPETLKNCKFLTNLNLNGNPFTRLPESICECSSITI 132

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +    L  LP  IG   +LR L    N LK +P ++ ++  LE L +  N I+ LP  
Sbjct: 133 LSLNDTTLTSLPANIGSLVNLRVLEARENHLKTIPLSIVELKQLEELDLGQNEIEDLPAK 192

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L+SLRE     N L ++P+S+     L ++++  N   +  LP ++G++  L +L++
Sbjct: 193 IGKLTSLREFYADMNNLGTLPDSISDCRMLDQLDVSEN--QINRLPENLGSMSSLTDLNV 250

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           S N I  LP S   L RL++L+V+ N L
Sbjct: 251 SMNDIPELPRSIGNLKRLQMLKVERNNL 278



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/176 (33%), Positives = 88/176 (50%), Gaps = 26/176 (14%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DLN+    M++I  LP SIG L  L  L +  N +  +   IG  S+L +L L  N + +
Sbjct: 247 DLNVS---MNDIPELPRSIGNLKRLQMLKVERNNLTQLTPEIGHCSALTELYLGQNMLTD 303

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIGDL +L                         L++  NNL  +P++IGS  SL  L
Sbjct: 304 LPDSIGDLKNLTT-----------------------LNVDCNNLIEIPETIGSCKSLTVL 340

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
            +  N + ELP TIG+C ++  L V  N+L +LP  V  ++ L+ L +  N  + +
Sbjct: 341 SLRQNLISELPMTIGKCENMTVLDVASNKLTSLPFTVKVLYKLQALWLSENQTQSI 396


>gi|330793753|ref|XP_003284947.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
 gi|325085163|gb|EGC38576.1| leucine-rich repeat-containing protein [Dictyostelium purpureum]
          Length = 509

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 101/264 (38%), Positives = 146/264 (55%), Gaps = 7/264 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP--DSIGDLLSLV 165
           +P+ IGKLS +  +D S+NRI  +P  IG LS+LK+L L  N++   P   ++G L SL 
Sbjct: 52  IPEEIGKLSKVEIIDFSKNRINYIPPEIGSLSTLKQLFLSNNKLFYTPLTPNLGSLKSLT 111

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LDL  NQ+  LPV LS+L  LE LD+  N L S P   G L +L+      N L+ LP 
Sbjct: 112 RLDLSANQLDDLPVELSKLEALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPG 171

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I     L+EL V  N+L  LP  +  +  L  L+V +N ++Q+P  +SS+ SL +LD+ 
Sbjct: 172 EISGWVKLQELNVSNNQLTFLPNQICLLGLLSTLNVGFNKLQQVPEELSSMVSLTDLDLK 231

Query: 286 FN-ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDS 343
            N  L+ VP+ L     L K++I N    +  LP  +G L  L ELDI +N Q++ +P  
Sbjct: 232 VNPPLQYVPQ-LSNLRQLKKLSIRN--LQITHLPLGLGLLSELIELDIRDNPQLKEIPYD 288

Query: 344 FRMLSRLRVLRVQENPLEVPPRNI 367
              L  L+ L +  N + + PR I
Sbjct: 289 IATLINLQKLDLFGNNMRIVPREI 312



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/260 (31%), Positives = 143/260 (55%), Gaps = 3/260 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPAT--IGGLSSLKKLDLHANRIIELPDSIGDLL 162
           I ++P  IG LS+L  L LS N++   P T  +G L SL +LDL AN++ +LP  +  L 
Sbjct: 72  INYIPPEIGSLSTLKQLFLSNNKLFYTPLTPNLGSLKSLTRLDLSANQLDDLPVELSKLE 131

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L YLD+  NQ+ + P+   +L  L+  +   N+L SLP  I   + L++L V  N L  
Sbjct: 132 ALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPGEISGWVKLQELNVSNNQLTF 191

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ I     L  L V +N+L+ +PE +  + +L  L ++ N   Q    +S+L  L++L
Sbjct: 192 LPNQICLLGLLSTLNVGFNKLQQVPEELSSMVSLTDLDLKVNPPLQYVPQLSNLRQLKKL 251

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +   ++  +P  L   + L++++I +N   L+ +P  I  L  L++LD+  N +R++P 
Sbjct: 252 SIRNLQITHLPLGLGLLSELIELDIRDN-PQLKEIPYDIATLINLQKLDLFGNNMRIVPR 310

Query: 343 SFRMLSRLRVLRVQENPLEV 362
               L  L+ L +++N L +
Sbjct: 311 EIGNLINLQHLDLRQNKLTI 330



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 86/281 (30%), Positives = 155/281 (55%), Gaps = 5/281 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + ++ +P+ +  + SL  LDL  N  +     +  L  LKKL +   +I  LP  +G L
Sbjct: 209 FNKLQQVPEELSSMVSLTDLDLKVNPPLQYVPQLSNLRQLKKLSIRNLQITHLPLGLGLL 268

Query: 162 LSLVYLDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
             L+ LD+R N Q+  +P  ++ L+ L++LDL  NN+  +P  IG+LI+L+ L +  N L
Sbjct: 269 SELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREIGNLINLQHLDLRQNKL 328

Query: 221 --EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             + +P  IG+  +L++L +  N L ALP  +  +  L+      N ++ +P  +  L+ 
Sbjct: 329 TIDNIPSEIGKLVNLKKLLLSNNLLVALPPEISSMKALKEFEASNNQLQSVPAEIGELTG 388

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L ++++S N+L S+P S    + LV  ++ +N  ++  LP ++  L+   + D+S+N + 
Sbjct: 389 LTKINLSGNKLTSIPPSFGNLSELVICDLKSN--EIAELPNTLNGLKACTKFDLSHNMLT 446

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            LP  F  L+ L +L V  NPL +PP  IV  G + ++Q++
Sbjct: 447 ELPWEFGDLTGLTILDVGHNPLTIPPNPIVMKGTETIIQWL 487



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 4/154 (2%)

Query: 98  QNKL-MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD 156
           QNKL +DNI   P  IGKL +L  L LS N +VA+P  I  + +LK+ +   N++  +P 
Sbjct: 325 QNKLTIDNI---PSEIGKLVNLKKLLLSNNLLVALPPEISSMKALKEFEASNNQLQSVPA 381

Query: 157 SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
            IG+L  L  ++L GN+++++P +   L  L   DL SN ++ LP+++  L +  K  + 
Sbjct: 382 EIGELTGLTKINLSGNKLTSIPPSFGNLSELVICDLKSNEIAELPNTLNGLKACTKFDLS 441

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
            N L ELP   G  + L  L V +N L   P  +
Sbjct: 442 HNMLTELPWEFGDLTGLTILDVGHNPLTIPPNPI 475



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/195 (27%), Positives = 91/195 (46%), Gaps = 34/195 (17%)

Query: 219 DLEELPHTIG--QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           ++++LP T+G  QC   +EL +  N L  +PE +GK+  +E++    N I  +P  + SL
Sbjct: 26  NIDKLPPTVGALQC---KELLLSENDLITIPEEIGKLSKVEIIDFSKNRINYIPPEIGSL 82

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           S+L++L +S N+L   P                       L  ++G+L+ L  LD+S NQ
Sbjct: 83  STLKQLFLSNNKLFYTP-----------------------LTPNLGSLKSLTRLDLSANQ 119

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQK 396
           +  LP     L  L  L + +N L+  P   +E G    +Q       K   K+ P  + 
Sbjct: 120 LDDLPVELSKLEALEYLDISDNQLQSFP---LEFGKLYNLQVFN--CSKNSLKSLP-GEI 173

Query: 397 KSWVEMCFFSRSNKR 411
             WV++   + SN +
Sbjct: 174 SGWVKLQELNVSNNQ 188


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N +  +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 150/287 (52%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N L  + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 135/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NEL +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 153/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N +  +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 150/287 (52%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N L  + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 135/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NEL +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 142/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/306 (31%), Positives = 165/306 (53%), Gaps = 14/306 (4%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L +L LSEN++   P  IG L +L++L
Sbjct: 7   EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 63

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQI---------SALPVALSRLVRLEELDLGSN 195
           DL+ N++  LP  IG L  L  L+L GNQI         + LP  + +L  L+ L L  N
Sbjct: 64  DLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYN 123

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L++LP  IG L +LK L +  N L  LP  I +  +L+EL ++ N+L  +P+ + ++  
Sbjct: 124 RLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELEN 183

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L +L ++ N I  LP  +    +L+EL++  N L ++P  +     L ++N+      ++
Sbjct: 184 LTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLE--NNRIK 241

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
            LP  IG LE L   ++S N++  +P     L  LR+L ++ N L+  PR + ++    V
Sbjct: 242 ILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEV 301

Query: 376 VQYMAD 381
           +  + +
Sbjct: 302 LNLLIN 307



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 129/237 (54%), Gaps = 16/237 (6%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L +L+L +N++  +P  IG L +L+ L L  N++   P  IG L +L  L
Sbjct: 4   LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 63

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GNQ+  LP  + +L +LE+L+L  N +++LP                N L  LP  I
Sbjct: 64  DLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKG--------------NQLTTLPAEI 109

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L + YNRL  LP  +G++  L+ L +  N +  LP  ++ L +L+EL ++ N
Sbjct: 110 GQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGN 169

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           +L  VP+ +     L  + + NN   +  LP+ I   + L+EL++  N++  LP   
Sbjct: 170 KLTIVPKEIWELENLTILRLKNN--RISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 224



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 34/267 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVP---------ATIGGLSSLKKLDLHANRIIE 153
           + ++ LP  IG+L  L  L+L  N+I  +P         A IG L +L+ L L  NR+  
Sbjct: 68  NQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLAT 127

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP  IG L +L  LDL GNQ++ LP  +++L  L+EL L  N L+ +P  I  L +L  L
Sbjct: 128 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 187

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N +  LP  I +  +L+EL +  NRL  LP  +G++  LE L++  N IK LP  +
Sbjct: 188 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 247

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            +L +L   ++S N+L S+                         P+ IGNL+ L  L + 
Sbjct: 248 GALENLWIFNLSGNKLASI-------------------------PKEIGNLQNLRMLYLE 282

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQ++ LP     L  L VL +  NPL
Sbjct: 283 NNQLKTLPRQMEKLQDLEVLNLLINPL 309



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 97/180 (53%), Gaps = 1/180 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P  I KL +L SL L +  +VA+P  I  L  L++L L  N++  LP  IG L +L  LD
Sbjct: 364 PKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 423

Query: 169 LRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  N +   LP  ++RL  L  L L  N     P  I  L  L  L V TN L+ LP  I
Sbjct: 424 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 483

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+ L + +NRL  LP  +G++H L  L ++YN IK LP  ++ L +LR+L +  N
Sbjct: 484 GRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 543



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 92/313 (29%), Positives = 148/313 (47%), Gaps = 50/313 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L SLDL  N++  +P  I  L +LK+L L+ N++  +P  I +L +L  L
Sbjct: 128 LPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTIL 187

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+ N+IS LP  + +   L+EL+L  N L +LP  IG L  L++L +E N ++ LP+ I
Sbjct: 188 RLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEI 247

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   +L    +  N+L ++P+ +G +  L +L +  N +K LP  M  L  L  L++  N
Sbjct: 248 GALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLIN 307

Query: 288 -------------------ELESVPE-------SLCFATTLVKMNIGNNFAD-------- 313
                              +L  V E       +L     L  +++   + +        
Sbjct: 308 PLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQEFSLFPKEI 367

Query: 314 -----LRAL----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV-QE 357
                LR+L          P+ I  L+ LE L +  NQ++ LP    +L  LR L +   
Sbjct: 368 LKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGAN 427

Query: 358 NPLEVPPRNIVEM 370
           N  EV P+ I  +
Sbjct: 428 NEFEVLPKEIARL 440



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/295 (28%), Positives = 136/295 (46%), Gaps = 31/295 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ IG L +L   +LS N++ ++P  IG L +L+ L L  N++  LP  +  L  L
Sbjct: 240 IKILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDL 299

Query: 165 VYLDL----------------------------RGNQISALPVALSRLVRLEELDLGSNN 196
             L+L                             G     L +AL + +++  L L    
Sbjct: 300 EVLNLLINPLLSEERKKIQALLPNCNIDLRDVEEGETYRNLNLALEQPLKILSLSLEYQE 359

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            S  P  I  L +L+ L +    L  LP  I +   L  L +  N+LK+LP+ +G +  L
Sbjct: 360 FSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNL 419

Query: 257 EVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
             L +  NN  + LP  ++ L +LR L ++ N  +  P+ +     LV +N+  N  D  
Sbjct: 420 RSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLD-- 477

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ALP  IG L+ L+ LD+S+N++  LP     L  L  L +Q N ++  P  I  +
Sbjct: 478 ALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARL 532



 Score = 95.5 bits (236), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 102/214 (47%), Gaps = 28/214 (13%)

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL- 213
           P  I  L +L  L L    + ALP  + RL  LE L LG N L SLP  IG L +L+ L 
Sbjct: 364 PKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLD 423

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I   N+ E LP  I +  +LR L ++ NR K  P+ + ++  L +L+V  N +  LP  +
Sbjct: 424 IGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKI 483

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L  L+ LD+S N L +                         LP  IG L  L EL + 
Sbjct: 484 GRLKGLQMLDLSHNRLTT-------------------------LPSEIGQLHNLTELYLQ 518

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N+I+ LP+    L  LR L + ENP  +PP+ +
Sbjct: 519 YNRIKTLPEEIARLQNLRKLTLYENP--IPPQEL 550



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/195 (31%), Positives = 101/195 (51%), Gaps = 1/195 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            ++SL L        P  I  L +L+ L L+   ++ LP  I  L  L  L L  NQ+ +
Sbjct: 349 KILSLSLEYQEFSLFPKEILKLKNLRSLSLYDTSLVALPKEIVRLKHLERLSLGLNQLKS 408

Query: 177 LPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           LP  +  L  L  LD+G+NN    LP  I  L +L+ L++  N  +  P  I +   L  
Sbjct: 409 LPKEIGLLRNLRSLDIGANNEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVI 468

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L V+ N+L ALPE +G++  L++L + +N +  LP+ +  L +L EL + +N ++++PE 
Sbjct: 469 LNVNTNQLDALPEKIGRLKGLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEE 528

Query: 296 LCFATTLVKMNIGNN 310
           +     L K+ +  N
Sbjct: 529 IARLQNLRKLTLYEN 543



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 65/116 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  E LP  I +L +L SL L++NR    P  I  L  L  L+++ N++  LP+ IG L 
Sbjct: 428 NEFEVLPKEIARLQNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLK 487

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            L  LDL  N+++ LP  + +L  L EL L  N + +LP+ I  L +L+KL +  N
Sbjct: 488 GLQMLDLSHNRLTTLPSEIGQLHNLTELYLQYNRIKTLPEEIARLQNLRKLTLYEN 543


>gi|341886752|gb|EGT42687.1| CBN-LET-413 protein [Caenorhabditis brenneri]
          Length = 711

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/251 (34%), Positives = 143/251 (56%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +IG L +L  LD  EN +  +P +I  L +L++LDL  N I ELP  IG L SL   
Sbjct: 143 LPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKIGKLTSLREF 202

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N + +LP ++S    L++LD+  N LS LPD++G++ SL  L + +N++ ELP +I
Sbjct: 203 YVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSNEIIELPSSI 262

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L+ L+ + N L  L   +G+  +L  + +  N +  LP T+  L  L  L+V  N
Sbjct: 263 GNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLRQLTTLNVDCN 322

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +PE++    +L  +++  N   L  LP +IG  E +  LD+++N++  LP + ++L
Sbjct: 323 NLSEIPETIGNCKSLTVLSLRQNI--LTELPMTIGRCENMTVLDVASNKLPNLPFTVKVL 380

Query: 348 SRLRVLRVQEN 358
            +L+ L + EN
Sbjct: 381 YKLQALWLSEN 391



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 148/283 (52%), Gaps = 25/283 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L+ L+ L+L+ N I  +P T+     L  L L+ N    LP+SI +  S+  L
Sbjct: 74  LPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECTSITIL 133

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    ++ LP  +  LV L  LD   N+L ++P+SI  L +L++L +  N++EELP  I
Sbjct: 134 SLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKI 193

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ +SLRE  VD N L++LP+++     L+ L V  N + +LP  + +++SL +L++S N
Sbjct: 194 GKLTSLREFYVDTNFLQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSN 253

Query: 288 ELESVPESLCF-----------------------ATTLVKMNIGNNFADLRALPRSIGNL 324
           E+  +P S+                           +L +M +G N+  L  LP +IG+L
Sbjct: 254 EIIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNY--LSDLPDTIGDL 311

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             L  L++  N +  +P++      L VL +++N L   P  I
Sbjct: 312 RQLTTLNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTI 354



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 109/188 (57%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LPDSI    +L  LD+S+NR+  +P  +G ++SL  L++ +N IIELP SIG+L  L
Sbjct: 209 LQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSNEIIELPSSIGNLKRL 268

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L    N ++ L   + +   L E+ LG N LS LPD+IG L  L  L V+ N+L E+P
Sbjct: 269 QMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLRQLTTLNVDCNNLSEIP 328

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG C SL  L +  N L  LP  +G+   + VL V  N +  LP T+  L  L+ L +
Sbjct: 329 ETIGNCKSLTVLSLRQNILTELPMTIGRCENMTVLDVASNKLPNLPFTVKVLYKLQALWL 388

Query: 285 SFNELESV 292
           S N+ +S+
Sbjct: 389 SENQSQSI 396



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 149/277 (53%), Gaps = 5/277 (1%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DLNL    M+NI+ L   +  L  L  LD+S+N +  +P  IG L+ L +L+L+ N I +
Sbjct: 40  DLNL---TMNNIKELDRRLFTLRRLRVLDVSDNELSVLPPDIGHLTQLIELNLNRNTITD 96

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P+++ +   L  L L GN  + LP ++     +  L L    L+ LP +IG L++L+ L
Sbjct: 97  IPETLKNCKLLTNLHLNGNPFTRLPESICECTSITILSLNDTTLTILPANIGLLVNLRVL 156

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
               N L  +P++I +  +L EL +  N ++ LP+ +GK+ +L    V  N ++ LP ++
Sbjct: 157 DARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKIGKLTSLREFYVDTNFLQSLPDSI 216

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           S   +L +LDVS N L  +P++L   T+L  +NI +N  ++  LP SIGNL+ L+ L   
Sbjct: 217 SDCRNLDQLDVSDNRLSRLPDNLGNMTSLTDLNISSN--EIIELPSSIGNLKRLQMLKAE 274

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            N +  L         L  + + +N L   P  I ++
Sbjct: 275 RNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDL 311



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/257 (33%), Positives = 137/257 (53%), Gaps = 2/257 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ +P  I +   L  L+L+ N I  +   +  L  L+ LD+  N +  LP  IG L  
Sbjct: 24  NLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSDNELSVLPPDIGHLTQ 83

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L+ L+L  N I+ +P  L     L  L L  N  + LP+SI    S+  L +    L  L
Sbjct: 84  LIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECTSITILSLNDTTLTIL 143

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG   +LR L    N L+ +P ++ ++  LE L +  N I++LP  +  L+SLRE  
Sbjct: 144 PANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEELPQKIGKLTSLREFY 203

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N L+S+P+S+     L ++++ +N   L  LP ++GN+  L +L+IS+N+I  LP S
Sbjct: 204 VDTNFLQSLPDSISDCRNLDQLDVSDNR--LSRLPDNLGNMTSLTDLNISSNEIIELPSS 261

Query: 344 FRMLSRLRVLRVQENPL 360
              L RL++L+ + N L
Sbjct: 262 IGNLKRLQMLKAERNSL 278



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 26/253 (10%)

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           +G    +  +D  ++ +  +P  I     L  L+L  N I  L   L  L RL  LD+  
Sbjct: 9   MGCQRQVDSVDRSSSNLQAIPTDIFRFRKLEDLNLTMNNIKELDRRLFTLRRLRVLDVSD 68

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA----- 249
           N LS LP  IG L  L +L +  N + ++P T+  C  L  L ++ N    LPE+     
Sbjct: 69  NELSVLPPDIGHLTQLIELNLNRNTITDIPETLKNCKLLTNLHLNGNPFTRLPESICECT 128

Query: 250 ------------------VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
                             +G +  L VL  R N+++ +P +++ L +L ELD+  NE+E 
Sbjct: 129 SITILSLNDTTLTILPANIGLLVNLRVLDARENHLRTIPNSIAELKNLEELDLGQNEIEE 188

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P+ +   T+L +  +  NF  L++LP SI +   L++LD+S+N++  LPD+   ++ L 
Sbjct: 189 LPQKIGKLTSLREFYVDTNF--LQSLPDSISDCRNLDQLDVSDNRLSRLPDNLGNMTSLT 246

Query: 352 VLRVQENP-LEVP 363
            L +  N  +E+P
Sbjct: 247 DLNISSNEIIELP 259



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 1/137 (0%)

Query: 83  LIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSL 141
           +IE+ S  G  + L +     +++  L   IG+  SL  + L +N +  +P TIG L  L
Sbjct: 255 IIELPSSIGNLKRLQMLKAERNSLTQLAPEIGQCQSLTEMYLGQNYLSDLPDTIGDLRQL 314

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
             L++  N + E+P++IG+  SL  L LR N ++ LP+ + R   +  LD+ SN L +LP
Sbjct: 315 TTLNVDCNNLSEIPETIGNCKSLTVLSLRQNILTELPMTIGRCENMTVLDVASNKLPNLP 374

Query: 202 DSIGSLISLKKLIVETN 218
            ++  L  L+ L +  N
Sbjct: 375 FTVKVLYKLQALWLSEN 391


>gi|383860520|ref|XP_003705737.1| PREDICTED: protein lap1-like [Megachile rotundata]
          Length = 1001

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/268 (32%), Positives = 140/268 (52%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP +I  L +L  LDLS+N I  +P +I    +L+ +D+  N     PD+I 
Sbjct: 71  LSDNEVTTLPPAIASLINLEYLDLSKNSIKELPDSIKECKNLRSIDISVNPFERFPDAIT 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            ++ L  L +    I  LP    RL  L  L+L  NN+ +LP S+  L++L++L +  ND
Sbjct: 131 HIVGLRELYINDAYIEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             ELP  +G   +L EL +D N ++ +P  + +++ L       N I  +P+ +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             + +S NE+  +P+SLC+  T+V + + +N   L ALP  IG +  LEEL ++ N +  
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDN--QLNALPNDIGQMSSLEELIVTKNFLEY 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S  +L +L  L    N L   P  I
Sbjct: 309 LPSSIGLLRKLHCLNADNNYLRCLPPEI 336



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 154/268 (57%), Gaps = 5/268 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G R+L + +     IE+LP + G+LS+L +L+L EN ++ +P ++  L +L++LD+  N 
Sbjct: 134 GLRELYINDAY---IEYLPANFGRLSALRTLELRENNMMTLPKSMSRLVNLQRLDIGNND 190

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
             ELP+ +GDL++L  L + GN I  +PV +++L RL   D   N +  +P  +     +
Sbjct: 191 FTELPEVVGDLINLTELWIDGNDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDI 250

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             + + +N++ +LP ++    ++  L+VD N+L ALP  +G++ +LE L V  N ++ LP
Sbjct: 251 SIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLP 310

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
           +++  L  L  L+   N L  +P  +   T L  +++ +N  +L  +P  +G+L  L  L
Sbjct: 311 SSIGLLRKLHCLNADNNYLRCLPPEIGSCTALSLLSLRSN--NLTRVPPELGHLSSLRVL 368

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           ++ NN I+ LP S   LS L+ L + +N
Sbjct: 369 NLVNNCIKFLPVSMLNLSNLKALWLSDN 396



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 3/263 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I+ LPDSI +  +L S+D+S N     P  I  +  L++L ++   I  LP + G L 
Sbjct: 97  NSIKELPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLS 156

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N +  LP ++SRLV L+ LD+G+N+ + LP+ +G LI+L +L ++ ND+  
Sbjct: 157 ALRTLELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGNDIRR 216

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I Q   L       N +  +P  V     + ++ +  N I QLP ++  L ++  L
Sbjct: 217 IPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTL 276

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L ++P  +   ++L ++ +  NF  L  LP SIG L  L  L+  NN +R LP 
Sbjct: 277 KVDDNQLNALPNDIGQMSSLEELIVTKNF--LEYLPSSIGLLRKLHCLNADNNYLRCLPP 334

Query: 343 SFRMLSRLRVLRVQENPL-EVPP 364
                + L +L ++ N L  VPP
Sbjct: 335 EIGSCTALSLLSLRSNNLTRVPP 357



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 127/256 (49%), Gaps = 25/256 (9%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L+KL L ANRI +LP  +     L  L L  N+++ LP A++ L+ LE LDL  N++  
Sbjct: 42  TLEKLYLDANRIKDLPRPLFQCHELRVLSLSDNEVTTLPPAIASLINLEYLDLSKNSIKE 101

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LPDSI    +L+ + +  N  E  P  I     LREL ++   ++ LP   G++  L  L
Sbjct: 102 LPDSIKECKNLRSIDISVNPFERFPDAITHIVGLRELYINDAYIEYLPANFGRLSALRTL 161

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R NN+  LP +MS L +L+ LD+  N+   +PE +     L ++ I  N  D+R +P 
Sbjct: 162 ELRENNMMTLPKSMSRLVNLQRLDIGNNDFTELPEVVGDLINLTELWIDGN--DIRRIPV 219

Query: 320 SIGNLEMLEELD-----------------------ISNNQIRVLPDSFRMLSRLRVLRVQ 356
           +I  L  L   D                       +S+N+I  LPDS   L  +  L+V 
Sbjct: 220 NINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVD 279

Query: 357 ENPLEVPPRNIVEMGA 372
           +N L   P +I +M +
Sbjct: 280 DNQLNALPNDIGQMSS 295



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 106/186 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P +I +L  L   D + N I  +P+ + G   +  + L +N I +LPDS+  L 
Sbjct: 212 NDIRRIPVNINQLYRLNHFDCTMNAIHVIPSEVEGWRDISIMHLSSNEIYQLPDSLCYLR 271

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++V L +  NQ++ALP  + ++  LEEL +  N L  LP SIG L  L  L  + N L  
Sbjct: 272 TIVTLKVDDNQLNALPNDIGQMSSLEELIVTKNFLEYLPSSIGLLRKLHCLNADNNYLRC 331

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C++L  L +  N L  +P  +G + +L VL++  N IK LP +M +LS+L+ L
Sbjct: 332 LPPEIGSCTALSLLSLRSNNLTRVPPELGHLSSLRVLNLVNNCIKFLPVSMLNLSNLKAL 391

Query: 283 DVSFNE 288
            +S N+
Sbjct: 392 WLSDNQ 397



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 91/160 (56%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +G RD+++ +   + I  LPDS+  L ++V+L + +N++ A+P  IG +SSL++L +
Sbjct: 242 SEVEGWRDISIMHLSSNEIYQLPDSLCYLRTIVTLKVDDNQLNALPNDIGQMSSLEELIV 301

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP SIG L  L  L+   N +  LP  +     L  L L SNNL+ +P  +G 
Sbjct: 302 TKNFLEYLPSSIGLLRKLHCLNADNNYLRCLPPEIGSCTALSLLSLRSNNLTRVPPELGH 361

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L SL+ L +  N ++ LP ++   S+L+ L +  N+ + L
Sbjct: 362 LSSLRVLNLVNNCIKFLPVSMLNLSNLKALWLSDNQSQPL 401


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/285 (35%), Positives = 150/285 (52%), Gaps = 3/285 (1%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           +S+K   D++    L+ NI  L D I +L  L  LDLS   + ++P  IG L SL  L L
Sbjct: 50  TSQKCRMDIDYGYPLLKNITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYL 109

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
           + N    L   IG+L +L YLDL  N++  L   + RL  L ELDL  N L +LP  IG 
Sbjct: 110 NGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGE 169

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT-LEVLSVRYNN 265
           L++L  L +  N LE LP  IG+   L  L ++ N L+ALPE +  +   L  L +  N 
Sbjct: 170 LVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNK 229

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K LP  +  L +L  L ++ N+LE +P  +     L ++ +  N  +L ALP +I  L+
Sbjct: 230 LKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGN--NLEALPETIRELK 287

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L+ L ++ N+++ LP     L  L VL +  N LE  P  I E+
Sbjct: 288 KLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKLERLPPEIGEL 332



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/324 (33%), Positives = 169/324 (52%), Gaps = 16/324 (4%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R+L+L     + +  LP  IG+L +L  L L++N++  +P  IG L  L +L
Sbjct: 143 EIGRLKNLRELDLSG---NKLRTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRL 199

Query: 145 DLHANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
            L+ N +  LP++I +L   L YL L GN++  LP  +  LV L  L L  N L  LP  
Sbjct: 200 YLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPE 259

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N+LE LP TI +   L+ L ++ N+LK LP  +G++  L VL +  
Sbjct: 260 IGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLNG 319

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +++LP  +  L  L  L ++ NE E++P  +     L  +++  N   L  LP  I  
Sbjct: 320 NKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGN--KLERLPYVIAE 377

Query: 324 LEMLEELDISNNQIRVLPDSF-RMLS-RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           L+ L ELD+S N++  LP    RMLS  L++L ++ N       NI E+G         +
Sbjct: 378 LKNLRELDLSGNKLETLPSYIVRMLSGSLQLLDLRGN-------NIYEVGDGKRTLGKKE 430

Query: 382 LVEKRDAKTQPVKQKKSW-VEMCF 404
           L E    + +  ++   W +  CF
Sbjct: 431 LREIFGDRVKFDEEASQWSLWKCF 454


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/286 (34%), Positives = 152/286 (53%), Gaps = 13/286 (4%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++++ K  R L+L+    + +  LP  IG+L +L SL L  N +  +P  IG L +LK+L
Sbjct: 63  QIANLKNLRKLDLR---YNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEEIGHLKNLKEL 119

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQIS--------ALPVALSRLVRLEELDLGSNN 196
            L  N +I LP++IG L +L  LDL  N  S         +   +  L  L+EL+L  N 
Sbjct: 120 SLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIGISEEIGDLQNLKELNLTGNR 179

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+ LP  IG L SL+KL +  N L  LP  IG+  +L+ L +  NRL   P+ +GK+  L
Sbjct: 180 LTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKLQNL 239

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           E L +  N +  LP  +S   +LREL +  N L ++P+ +     L ++++G N   L  
Sbjct: 240 EELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGN--RLTT 297

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           LP+ IG  + L EL +  N++  LP     L  L  L + +NPL V
Sbjct: 298 LPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSV 343



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/293 (31%), Positives = 147/293 (50%), Gaps = 31/293 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L ++  K S +  L LS   I ++P  I  L +L+KLDL  N++  LP  IG L +L  L
Sbjct: 37  LREAFQKPSDVHILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSL 96

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL---------ISLKKLIVETN 218
            L GN +S LP  +  L  L+EL L  N L +LP++IG L         ++L+ LI  + 
Sbjct: 97  CLLGNSLSTLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSE 156

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           ++  +   IG   +L+EL +  NRL  LP+ +GK+ +LE L +  N++  LP  +  L +
Sbjct: 157 EI-GISEEIGDLQNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQN 215

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNN-----------FADLR----------AL 317
           L+ L +  N L + P+ +     L ++++  N           F +LR           L
Sbjct: 216 LKRLSLKGNRLTTFPKEIGKLQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTL 275

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ L+EL +  N++  LP        L  LR++ N L   P+ I ++
Sbjct: 276 PKEIGRLKNLKELSLGGNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKL 328


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 63  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 122

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 123 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 182

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 183 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 242

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 243 TDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 300

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 301 LPKSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEV----SQATE 356

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 357 LHVLDVAGNR 366



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 137 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 196

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 197 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIP 256

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 257 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLNNLNA 316

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 317 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLSRIPAEVSQATELHVLDVAGNRLLHLPLSL 374

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 375 TAL-KLKALWLSDN 387



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 117 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 176

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 177 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 236

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 237 SGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 296

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 297 RLLTLPKSIGKLKKLNNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEVSQA 354

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 355 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 386



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 48  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 107

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 108 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 167

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 168 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 227

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 228 RLERLPEEISGLTSLTDLVISQNL--LEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 285

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 286 ESLTELVLTENRLLTLPKSI 305



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 227 NRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 286

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 287 SLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLSR 346

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 347 IPAEVSQATELHVLDVAGNRLLHLP 371



 Score = 45.8 bits (107), Expect = 0.043,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           LE +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 11  LETIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 68

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L++     NPL   P +  E+
Sbjct: 69  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPEL 124


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/322 (28%), Positives = 151/322 (46%), Gaps = 28/322 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  + KL  L  L + +N++  VP+ +  L +L+ L +  N++   P  +  L 
Sbjct: 413 NKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLT 472

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L + GNQ++ +P  +  L  LE+L +G N +  LPD +  L  LK L V     +E
Sbjct: 473 KLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDE 532

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + Q  +L  L     +   +P+ VG +  L  LS+ YN ++ LP+TMS L +LR +
Sbjct: 533 FPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPSTMSHLHNLRVV 592

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            ++ N+ ++ PE LC                          L  +E+LDISNN I  LP 
Sbjct: 593 RLNKNKFDTFPEVLC-------------------------ELPAMEKLDISNNNITRLPT 627

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQ---KKSW 399
           +     +LR L V  NPL  PP+++ E G  A++ ++    +K     +   +   + S 
Sbjct: 628 ALHRADKLRDLDVSGNPLAYPPQDVCEQGTGAIMAFLKQEADKEKKILRAFNRLSVRASQ 687

Query: 400 VEMCFFSRSNKRKRNGMDYVKA 421
            +    +RS       MD +KA
Sbjct: 688 TQWKPLARSLGISNRAMDAIKA 709



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 137/257 (53%), Gaps = 3/257 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++IG+L  L  LD + N + ++P  I  L  LK+L +H+N + ELPD + DL +L +L
Sbjct: 50  IPEAIGRLQKLYRLDANGNMLTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWL 109

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            ++ N++  LP  +   + L   D  +NNLS+ P  +  L  +++L +  N L E+P  +
Sbjct: 110 WVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGV 169

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
               +L  L V  N+L   P  V K+  L +L +  N + ++P  + SLS+L  L+ + N
Sbjct: 170 CSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGN 229

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +  + P  +     L ++ I +N   L  +P  + +L  LE LD+ NN++   P     L
Sbjct: 230 KFSTFPLGVEKLQKLTRLLIHDN--QLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKL 287

Query: 348 SRLRVLRVQENPL-EVP 363
            +LR L +  N L EVP
Sbjct: 288 QKLRELYIYGNQLTEVP 304



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/303 (29%), Positives = 147/303 (48%), Gaps = 25/303 (8%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA 148
           +K TR L   N+L +    +P  +  L +L  LD+  N++   P  +  L  L++L ++ 
Sbjct: 242 QKLTRLLIHDNQLTE----VPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYG 297

Query: 149 NRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           N++ E+P  +  L +L  L +  N++S  P  + +L +L +L +  N L+ +P  + SL 
Sbjct: 298 NQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLP 357

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +L+ L+V  N L   P  + +   LRELR+  N+L  +P  V  +  LEVL V  N +  
Sbjct: 358 NLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLST 417

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN-----------FADLRAL 317
            P  +  L  LREL +  N+L  VP  +C    L  + +GNN              LR L
Sbjct: 418 FPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLREL 477

Query: 318 ----------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
                     P  + +L  LE+L +  N IR LPD    L+RL+ L V     +  PR +
Sbjct: 478 YINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPRQV 537

Query: 368 VEM 370
           +++
Sbjct: 538 LQL 540



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/315 (28%), Positives = 146/315 (46%), Gaps = 8/315 (2%)

Query: 57  KVPIMIM-CMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKL 115
           K+P  I  C+  V  D    +L      +E   K   R+L +    +  +   P  +  L
Sbjct: 118 KLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQK--VRELRIYGNQLTEV---PSGVCSL 172

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
            +L  L +  N++   P  +  L  L+ L ++ N++ E+P  +  L +L  L+  GN+ S
Sbjct: 173 PNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFS 232

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
             P+ + +L +L  L +  N L+ +P  + SL +L+ L V  N L   P  + +   LRE
Sbjct: 233 TFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRE 292

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N+L  +P  V  +  LEVLSV  N +   P  +  L  L +L ++ N+L  VP  
Sbjct: 293 LYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSG 352

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +C    L  + +GNN   L   P  +  L+ L EL I  NQ+  +P     L  L VL V
Sbjct: 353 VCSLPNLELLVVGNNM--LSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHV 410

Query: 356 QENPLEVPPRNIVEM 370
             N L   P  + ++
Sbjct: 411 YNNKLSTFPPGVEKL 425



 Score =  101 bits (251), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 65/206 (31%), Positives = 105/206 (50%), Gaps = 2/206 (0%)

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           +YLDL    ++++P  +  +  LE LD+ +N L+S+P++IG L  L +L    N L  LP
Sbjct: 15  LYLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLP 74

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I     L++L V  N L  LP+ +  +  LE L V+ N +K+LPT + S  +L   D 
Sbjct: 75  QAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDA 134

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L + P  +     + ++ I  N   L  +P  + +L  LE L + NN++   P   
Sbjct: 135 SNNNLSTFPPGVEKLQKVRELRIYGN--QLTEVPSGVCSLPNLELLSVGNNKLSTFPPGV 192

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L +LR+L +  N L   PR +  +
Sbjct: 193 EKLQKLRILYIYGNQLTEVPRGVCSL 218


>gi|114557142|ref|XP_513483.2| PREDICTED: leucine-rich repeat-containing protein 40 [Pan
           troglodytes]
 gi|410217710|gb|JAA06074.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410257504|gb|JAA16719.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410300344|gb|JAA28772.1| leucine rich repeat containing 40 [Pan troglodytes]
 gi|410331221|gb|JAA34557.1| leucine rich repeat containing 40 [Pan troglodytes]
          Length = 602

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 177/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAAILEYLRDRI 600


>gi|397521130|ref|XP_003830656.1| PREDICTED: leucine-rich repeat-containing protein 40 [Pan paniscus]
          Length = 602

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 177/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 GGNPFRVPRAAILMKGTAAILEYLRDRI 600


>gi|308451071|ref|XP_003088533.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308478403|ref|XP_003101413.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
 gi|308246970|gb|EFO90922.1| hypothetical protein CRE_29288 [Caenorhabditis remanei]
 gi|308263314|gb|EFP07267.1| hypothetical protein CRE_13532 [Caenorhabditis remanei]
          Length = 559

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/309 (31%), Positives = 151/309 (48%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L LSEN + ++P ++  L SL+ LDL  N++ E+P  I  + SL  L
Sbjct: 111 LPTEIGQLVNLKKLGLSENALSSLPDSLASLESLETLDLRHNKLTEVPSVIYKINSLETL 170

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I A+   +  LV+L+ LD+  N +  LP +IG L SL   +V  N L  +P  I
Sbjct: 171 WLRYNRIVAVDEQIGNLVKLKMLDVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEI 230

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+C SL +L + +N L  LP ++GK+  L  + +RYN I+ +P+ + S   L E  V  N
Sbjct: 231 GECLSLTQLDLQHNDLSELPYSIGKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESN 290

Query: 288 ELESVPESLCF------------------------------------------------- 298
            L+ +P +L                                                   
Sbjct: 291 HLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSK 350

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           AT L K+N+  N  +L +LP  +G+   + EL++S NQ++VLP+    L  L +L +  N
Sbjct: 351 ATRLTKLNLKEN--ELVSLPLDMGSWTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNN 408

Query: 359 PLEVPPRNI 367
            L+  P  I
Sbjct: 409 QLKKLPNQI 417



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 133/229 (58%), Gaps = 2/229 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           ++LDL +  I  +P  I +L  L  L L  N+++ LP  + +LV L++L L  N LSSLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLP 135

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           DS+ SL SL+ L +  N L E+P  I + +SL  L + YNR+ A+ E +G +  L++L V
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDV 195

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N I++LP+ +  L+SL    VS+N L  VPE +    +L ++++ +N  DL  LP SI
Sbjct: 196 RENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHN--DLSELPYSI 253

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L  L  + I  N+IR +P       +L    V+ N L++ P N++ M
Sbjct: 254 GKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 302



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/274 (31%), Positives = 145/274 (52%), Gaps = 7/274 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   I ++P+ I  L+ L +L L+ N++  LP  IG L++L  L L  N +S+LP +
Sbjct: 78  LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALSSLPDS 137

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L+ L  LE LDL  N L+ +P  I  + SL+ L +  N +  +   IG    L+ L V  
Sbjct: 138 LASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKMLDVRE 197

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+++ LP A+GK+ +L V  V YN++ ++P  +    SL +LD+  N+L  +P S+   T
Sbjct: 198 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYSIGKLT 257

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENP 359
            LV+  IG  +  +R +P  + + + LEE  + +N +++LP +   ML ++  + +  N 
Sbjct: 258 NLVR--IGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNE 315

Query: 360 LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPV 393
           L   P      G Q  V  +   +E       P+
Sbjct: 316 LTAFPAG----GPQQFVSTVTINMEHNQISKIPI 345



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/350 (31%), Positives = 163/350 (46%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IGKL+SLV   +S N +  VP  IG   SL +LDL  N + ELP SIG L 
Sbjct: 198 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYSIGKLT 257

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI-------------- 208
           +LV + +R N+I  +P  L    +LEE  + SN+L  LP ++ +++              
Sbjct: 258 NLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELT 317

Query: 209 -----------------------------------SLKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N+L  LP  +G  +S+
Sbjct: 318 AFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSI 377

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+LK LPE + K+  LE+L +  N +K+LP  + +L  LRELD+  NELE+VP
Sbjct: 378 TELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRELDLEENELETVP 437

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             + F   L K+ I +N   +  LPRSIGNL  L++L +  N +  +P+    L  L+ L
Sbjct: 438 TEIGFLQHLTKLWIQSN--KIITLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSL 495

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  I   G   V+QY+
Sbjct: 496 YLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYL 545



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 161/360 (44%), Gaps = 97/360 (26%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDS+  L SL +LDL  N++  VP+ I  ++SL+ L L  NRI+ + + IG+L+ L  L
Sbjct: 134 LPDSLASLESLETLDLRHNKLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGNLVKLKML 193

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D+R N+I  LP A+ +L  L    +  N+L+ +P+ IG  +SL +L ++ NDL ELP++I
Sbjct: 194 DVRENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGECLSLTQLDLQHNDLSELPYSI 253

Query: 228 GQ-----------------------CSSLRELRVDYNRLKALP----EAVGKIHTLEV-- 258
           G+                       C  L E  V+ N L+ LP      + KIHT+ +  
Sbjct: 254 GKLTNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSR 313

Query: 259 -------------------------------------------LSVRYNNIKQLPTTMSS 275
                                                      L+++ N +  LP  M S
Sbjct: 314 NELTAFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGS 373

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL----------- 324
            +S+ EL++S N+L+ +PE +     L  + + NN   L+ LP  IGNL           
Sbjct: 374 WTSITELNLSTNQLKVLPEDIEKLVNLEILVLSNN--QLKKLPNQIGNLKKLRELDLEEN 431

Query: 325 ------------EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
                       + L +L I +N+I  LP S   L  L+ LR+ EN L   P  I  + +
Sbjct: 432 ELETVPTEIGFLQHLTKLWIQSNKIITLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDS 491



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +++ S     +LNL     + ++ LP+ I KL +L  L LS N++  +P  IG L  L++
Sbjct: 369 LDMGSWTSITELNLST---NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLKKLRE 425

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  N +  +P  IG L  L  L ++ N+I  LP ++  L  L++L LG NNL+++P+ 
Sbjct: 426 LDLEENELETVPTEIGFLQHLTKLWIQSNKIITLPRSIGNLCSLQDLRLGENNLTAIPEE 485

Query: 204 IGSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           IG L SLK L +  N  L  LP  +  C SL  + ++ + L  +P  +
Sbjct: 486 IGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEI 533



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 79/149 (53%), Gaps = 4/149 (2%)

Query: 229 QCSSLRELRVDYNRLK--ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +C   ++ R+D + ++  ++P  + ++  L  L +  N +  LPT +  L +L++L +S 
Sbjct: 69  KCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSE 128

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N L S+P+SL    +L  +++ +N   L  +P  I  +  LE L +  N+I  + +    
Sbjct: 129 NALSSLPDSLASLESLETLDLRHN--KLTEVPSVIYKINSLETLWLRYNRIVAVDEQIGN 186

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           L +L++L V+EN +   P  I ++ +  V
Sbjct: 187 LVKLKMLDVRENKIRELPSAIGKLTSLVV 215


>gi|348524990|ref|XP_003450005.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oreochromis
           niloticus]
          Length = 570

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 162/273 (59%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L SL++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 213 NKIKQLPAEIGELCSLITLDVAHNQLEHLPKEIGHCTQITNLDLQHNELLDLPETIGNLA 272

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           S+  L LR N++SA+P +L++   LEEL+L +NN+S LP+ +  SL++L  L +  N  +
Sbjct: 273 SINRLGLRYNRLSAIPRSLAQCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQ 332

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 333 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTALPLDFGTWT 390

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +C   +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 391 SMVELNLATNQLTKIPEDICGLASLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 448

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L + PR I  +
Sbjct: 449 ECLPNEIAYLKDLQKLVLTNNQLTMLPRGIGHL 481



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 145/314 (46%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G LS LV+L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 121 NKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPPVVYRLT 180

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L SL  L V  N LE 
Sbjct: 181 SLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCSLITLDVAHNQLEH 240

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--------- 273
           LP  IG C+ +  L + +N L  LPE +G + ++  L +RYN +  +P ++         
Sbjct: 241 LPKEIGHCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAQCRELEEL 300

Query: 274 ---------------------------------------SSLSSLRELDVSFNELESVPE 294
                                                  S  S++  L++  N +  +P 
Sbjct: 301 NLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 360

Query: 295 SL-CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            +   A  L K+N+ +N   L ALP   G    + EL+++ NQ+  +P+    L+ L VL
Sbjct: 361 GIFSRAKVLSKLNMKDN--QLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVL 418

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 419 ILSNNLLKKLPHGI 432



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/283 (31%), Positives = 144/283 (50%), Gaps = 37/283 (13%)

Query: 105 IEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLHANRIIELPDSI 158
           I  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++  NRI ++P  I
Sbjct: 307 ISVLPE--GLLSSLVNLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNRINKIPFGI 362

Query: 159 GDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                 L  L+++ NQ++ALP+       + EL+L +N L+ +P+ I  L SL+ LI+  
Sbjct: 363 FSRAKVLSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKIPEDICGLASLEVLILSN 422

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L++LPH IG    LREL ++ N+L+ LP  +  +  L+ L +  N +  LP  +  L 
Sbjct: 423 NLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTMLPRGIGHLL 482

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
           +L  L +  N+L+ +PE                          IG LE LEEL +++N  
Sbjct: 483 NLTHLGLGENQLQHLPE-------------------------EIGTLENLEELYLNDNPN 517

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 518 LHSLPFELALCSKLSIMSIENCPLTHLPPQIVAGGPSFIIQFL 560



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ A+P   G  +S+ +L+L  N++ ++
Sbjct: 348 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTALPLDFGTWTSMVELNLATNQLTKI 405

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ I  L SL  L L  N +  LP  +  L +L ELDL  N L  LP+ I  L  L+KL+
Sbjct: 406 PEDICGLASLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLV 465

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG   +L  L +  N+L+ LPE +G +  LE L +  N N+  LP  +
Sbjct: 466 LTNNQLTMLPRGIGHLLNLTHLGLGENQLQHLPEEIGTLENLEELYLNDNPNLHSLPFEL 525

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 526 ALCSKLSIMSIENCPLTHLP 545



 Score = 45.4 bits (106), Expect = 0.050,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 25/135 (18%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LPT++  L+ L EL +  N+L+S+P  +   + LV + +  N   L +LP
Sbjct: 93  LDLSKRSIHTLPTSIKELTQLTELYLYSNKLQSLPAEVGCLSGLVTLALSEN--SLTSLP 150

Query: 319 RSIGNLEMLEELDISNNQIRVLP-----------------------DSFRMLSRLRVLRV 355
            S+ +L+ L  LD+ +N++R +P                          R LS+L +L +
Sbjct: 151 DSLDSLKKLRMLDLRHNKLREIPPVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSI 210

Query: 356 QENPLEVPPRNIVEM 370
           +EN ++  P  I E+
Sbjct: 211 RENKIKQLPAEIGEL 225


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/287 (30%), Positives = 148/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ L + IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 133/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  L + IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 106/200 (53%), Gaps = 2/200 (1%)

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           L  AL     +  LDL    L +L + IG L +L+KL +  N+   L   I Q   L++L
Sbjct: 33  LEKALQNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKL 92

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            ++ N+L  LP+ +G++  L+ LS+  N +  LP  +    +L++L++  N+L  +P+ +
Sbjct: 93  NLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEI 152

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                L ++++ +N   L +LP  I  L+ L+ LD+++N+   +     +L  L  L ++
Sbjct: 153 GQLQNLQELSLLSN--KLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLR 210

Query: 357 ENPLEVPPRNIVEMGAQAVV 376
            N L+  P+ I ++ +  V+
Sbjct: 211 SNKLKTIPKEIRQLKSLKVL 230



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 2/127 (1%)

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           K L +A+     +  L + +  +K L   +  L +L++LD+  NE   + + +     L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           K+N+ NN   L  LP+ IG L+ L+EL + +N++  LP        L+ L +  N L V 
Sbjct: 91  KLNLNNN--KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL 148

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 149 PKEIGQL 155


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 147/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IGKL +L +L L+ENR+  +P  I  L +L  LDL+ N++  LP+ IG L +L  L
Sbjct: 55  IPKEIGKLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKEL 114

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++ LP ++ +L  LE L+L  N L++LP+ I  L SL+ L +  N+++ LP  I
Sbjct: 115 NLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q S+L  L +  N++K L     ++  L+ L++  N ++  P  +  L SL  L++++N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
             + +PE +     L  + +  N   L +LP  IG LE LE L +  N++  LP     L
Sbjct: 235 RFKILPEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHL 292

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+++ +++N L   P  I
Sbjct: 293 RSLKIVHLEQNRLTAIPEEI 312



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 148/273 (54%), Gaps = 2/273 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP+ IG   +L  L L  NR+ A+P  IG L +L+ L L  NR+  +P+ I  L +L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENRLKTIPNEIEQLQNL 88

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N++  LP  + +L  L+EL+L  N L+ LP SIG L +L+ L +  N L  LP
Sbjct: 89  ATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLP 148

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I    SL+ L +  N +K+LP+ + ++  L  L +  N IK+L      L +L+ L++
Sbjct: 149 EEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNL 208

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+LE+ P  +    +L  +N+  N+   + LP  I  LE L+ L+++ NQ+  LP+  
Sbjct: 209 LDNKLENFPADIVQLKSLEFLNL--NYNRFKILPEEILQLENLQVLELTGNQLTSLPEGI 266

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
             L +L  L ++ N L   P+ I  + +  +V 
Sbjct: 267 GRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVH 299



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 2/228 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+ IGKL +L  L+LS N++  +P +IG L +L+ L+L  N++  LP+ I  L 
Sbjct: 96  NKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLK 155

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L+L  N+I +LP  +S+L  L  LDLG N +  L      L +LK L +  N LE 
Sbjct: 156 SLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLEN 215

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  I Q  SL  L ++YNR K LPE + ++  L+VL +  N +  LP  +  L  L  L
Sbjct: 216 FPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESL 275

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            +  N L ++P+ +    +L  +++  N   L A+P  IG+L+ L+EL
Sbjct: 276 FLEGNRLTTLPKGIEHLRSLKIVHLEQN--RLTAIPEEIGSLQNLKEL 321



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           V + +LE LP  IG   +L +L +  NRL A+P+ +GK+  LE L +  N +K +P  + 
Sbjct: 24  VSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENRLKTIPNEIE 83

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L  LD+  N+L+ +P  +     L ++N+  N   L  LP SIG L+ LE L++  
Sbjct: 84  QLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGN--QLTVLPPSIGQLQNLEILELFR 141

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NQ+  LP+    L  L++L + EN ++  P+ I ++
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQL 177



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L+DN +E  P  I +L SL  L+L+ NR   +P  I  L +L+ L+L  N++  LP+ IG
Sbjct: 208 LLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIG 267

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
            L  L  L L GN+++ LP  +  L  L+ + L  N L+++P+ IGSL +LK+L ++
Sbjct: 268 RLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQ 324



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  L+L+ N++ ++P  IG L  L+ L L  NR+  LP  I  L SL  +
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIV 298

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNN 196
            L  N+++A+P  +  L  L+EL L   N
Sbjct: 299 HLEQNRLTAIPEEIGSLQNLKELYLQDFN 327


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 157/298 (52%), Gaps = 28/298 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR----------------- 150
           LP  IG L +L   DLS N++  +PA +G L+ L+   ++ N                  
Sbjct: 194 LPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFPLEQLNQLQYM 253

Query: 151 ------IIELPDSIGDLLSLVYLDLRGN-QISALPVALSRLVRLEELDLGSNNLSSLPDS 203
                 + ELP+ +  L S+V LDLR N QI  +P  + RL  L  LDL  N L++LP  
Sbjct: 254 GLRNTLLDELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAE 313

Query: 204 IGSLISLKKLIVETNDL--EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           IG+L++L+ L +  N L  E +P  +G+ + L  L +  N L  LP  +  ++ L+ L  
Sbjct: 314 IGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDA 373

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N +  +P  +  LS+L++L+VS N L ++P ++   T L K++I  N  ++  LP  +
Sbjct: 374 ANNVLLSVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGN--EIHELPSEV 431

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           G L  + ++D+S+N +  LP     L +L V+ +  NPL +PP +++  G  AV+ ++
Sbjct: 432 GELSSVVKIDMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLNRGTPAVLAWL 489



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 97/329 (29%), Positives = 155/329 (47%), Gaps = 39/329 (11%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS---------------------- 140
           ++I  LPD +GKL+ +  LDL  NRI  VP  +G L+                       
Sbjct: 47  NDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLRELWLCNNKLFFTAPLTPNL 106

Query: 141 -----LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
                L+KLDL  N++ ELP  +G L +L YLD+ GN +   P     L  L      +N
Sbjct: 107 GKLRLLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIFKAENN 166

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            L +L   +G+L  L +  +  N L  LP  IG   +L+   +  N+L+ LP  +G +  
Sbjct: 167 RLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLAR 226

Query: 256 LEVLSVRYN-NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           L   SV  N N+K L   +  L+ L+ + +    L+ +PE LC   ++V++++ NN    
Sbjct: 227 LRSFSVNENSNLKTL-FPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNNLQIG 285

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE---VPPRNIVEMG 371
           R +P  IG L  L  LD+  N++  LP     L  L +L +++N L    +PP    E+G
Sbjct: 286 R-IPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPP----ELG 340

Query: 372 AQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
               ++ +  L+ K +  T P + K  + 
Sbjct: 341 RLTRLERL--LMSKNNLATLPAEIKTMYA 367



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 7/219 (3%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           +DL    I E+P S+  L     L L  N I++LP  L +L R+E LDLG+N ++ +P +
Sbjct: 20  VDLRKQGIPEIPKSVRQL-QCRELILAENDITSLPDELGKLARIEVLDLGNNRINHVPPA 78

Query: 204 IGSLI-SLKKLIVETNDL---EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +G L  +L++L +  N L     L   +G+   L++L +  N+L+ LP  +G++  L+ L
Sbjct: 79  LGDLAPTLRELWLCNNKLFFTAPLTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYL 138

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  NN++  P    +L +L       N L ++   +   T L +  + NN   L  LP 
Sbjct: 139 DISGNNLQVFPPEFGNLRALLIFKAENNRLRALAPEVGNLTELSEWYLANNA--LSRLPP 196

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            IGNL  L+  D+SNN+++ LP     L+RLR   V EN
Sbjct: 197 QIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNEN 235



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/170 (32%), Positives = 90/170 (52%), Gaps = 2/170 (1%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN L   IE +P  +G+L+ L  L +S+N +  +PA I  + +LK+LD   N ++ +P+ 
Sbjct: 327 QNSLA--IELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPEE 384

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG L +L  L++ GN++  LP  ++ L  L +LD+  N +  LP  +G L S+ K+ +  
Sbjct: 385 IGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKIDMSH 444

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
           N +  LP  +G    L  + + +N L   P  V    T  VL+    N K
Sbjct: 445 NMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLNRGTPAVLAWLRKNEK 494


>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 400

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 73/182 (40%), Positives = 121/182 (66%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIG+L++L SL++ +NR+  +P +I  L++L+ L+L  NR+I LP+SIG L +L  L
Sbjct: 54  LPESIGQLTNLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLL 113

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL+ NQ++ LP ++ +L  L  ++LG+N L+SLPDS  +LI L+ L +  N    +P +I
Sbjct: 114 DLQQNQLTTLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESI 173

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ ++L+ L +D N+L  LPE +G+   L+ L ++ N++  LP   + L  L  L++S N
Sbjct: 174 GELTNLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNN 233

Query: 288 EL 289
            L
Sbjct: 234 PL 235



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 134/225 (59%), Gaps = 2/225 (0%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           S  K  +L  + +    + A+P++IG ++SL +L L  N +  LP+SIG L +L  L++R
Sbjct: 11  STAKDKNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIR 70

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            N+++ LP ++  L  LE L+L +N L +LP+SIG L +L  L ++ N L  LP ++GQ 
Sbjct: 71  DNRLTTLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQL 130

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           +SL  + +  N+L +LP++   +  L+ L +  N    +P ++  L++L+ LD+  N+L 
Sbjct: 131 TSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLT 190

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           ++PE +   + L ++ I +N   L +LP     LE LE L++SNN
Sbjct: 191 NLPEFIGEFSNLKRLKIQDNH--LTSLPLWFTKLEKLERLELSNN 233



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 141/249 (56%), Gaps = 7/249 (2%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT 134
           ++L ++  LI  +  K  + +++++    N+  LP SIG+++SL+ L L  N +  +P +
Sbjct: 1   MNLKEVEDLISTAKDKNLQRISIEHG---NLGALPSSIGQVTSLLRLTLVNNMLKTLPES 57

Query: 135 IGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
           IG L++LK L++  NR+  LP+SI  L +L  L+L  N++  LP ++ RL  L  LDL  
Sbjct: 58  IGQLTNLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQ 117

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           N L++LP+S+G L SL  + +  N L  LP +      L+ L++  N+  ++PE++G++ 
Sbjct: 118 NQLTTLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELT 177

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN---- 310
            L+ L +  N +  LP  +   S+L+ L +  N L S+P        L ++ + NN    
Sbjct: 178 NLKWLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLTD 237

Query: 311 FADLRALPR 319
            + L++LP+
Sbjct: 238 LSILQSLPK 246



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/195 (34%), Positives = 111/195 (56%), Gaps = 3/195 (1%)

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
            GN + ALP ++ ++  L  L L +N L +LP+SIG L +LK L +  N L  LP +I  
Sbjct: 25  HGN-LGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNRLTTLPESIEL 83

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            ++L  L +  NRL  LPE++G++  L +L ++ N +  LP ++  L+SL  +++  N+L
Sbjct: 84  LTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQLTSLNYIELGNNQL 143

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            S+P+S      L  + + +N     ++P SIG L  L+ LD+  NQ+  LP+     S 
Sbjct: 144 TSLPDSFKNLIDLQSLQLSDN--QFTSVPESIGELTNLKWLDLDGNQLTNLPEFIGEFSN 201

Query: 350 LRVLRVQENPLEVPP 364
           L+ L++Q+N L   P
Sbjct: 202 LKRLKIQDNHLTSLP 216



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 110/192 (57%), Gaps = 2/192 (1%)

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           ++ ++   L+ + +   NL +LP SIG + SL +L +  N L+ LP +IGQ ++L+ L +
Sbjct: 10  ISTAKDKNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEI 69

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             NRL  LPE++  +  LE L +  N +  LP ++  L++L  LD+  N+L ++PES+  
Sbjct: 70  RDNRLTTLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQ 129

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            T+L  + +GNN   L +LP S  NL  L+ L +S+NQ   +P+S   L+ L+ L +  N
Sbjct: 130 LTSLNYIELGNN--QLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGN 187

Query: 359 PLEVPPRNIVEM 370
            L   P  I E 
Sbjct: 188 QLTNLPEFIGEF 199


>gi|302822487|ref|XP_002992901.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
 gi|300139246|gb|EFJ05990.1| hypothetical protein SELMODRAFT_136157 [Selaginella moellendorffii]
          Length = 584

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/377 (30%), Positives = 178/377 (47%), Gaps = 36/377 (9%)

Query: 54  FRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIG 113
            R   P +   + CVGQD +   L+ L  L+   +K               I+ L   +G
Sbjct: 21  LREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNK---------------IKLLSQELG 65

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
            L S+V L++S N + ++P +IG L+SLK LD+  N I+ELP  IG+L SLV      NQ
Sbjct: 66  NLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNNQ 125

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP----HTIGQ 229
           I  LP  +   V L EL L +N L+ LPD + S   L  L +E N +   P    H++G 
Sbjct: 126 IKELPSTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLG- 184

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L EL    N +  LPE +G +  L  L +  N IK +P+++ + S L E     N L
Sbjct: 185 --NLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLL 242

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            S+P  +    +L+  ++  N   L   P S  ++  L  LD+SNN +  LP     +  
Sbjct: 243 SSLPNEIGNLQSLLTFDLHGN--QLSEFPVSACSMR-LSVLDLSNNNLSGLPPELGFMGS 299

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA-------KTQPVKQKKSWVEM 402
           LR L +  NPL     ++V     A+++Y+ D     D        + Q V+  ++ V  
Sbjct: 300 LRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARAAVSS 359

Query: 403 CFFSRSNKRKRNGMDYV 419
              S S+K     +D+V
Sbjct: 360 KALSLSDKN----LDHV 372



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 85/340 (25%), Positives = 149/340 (43%), Gaps = 74/340 (21%)

Query: 108 LPDSIGKLSSLVS----------------------LDLSENRIVAVPATIGGLSSLKKLD 145
           LP+ IG L SL++                      LDLS N +  +P  +G + SL+KL 
Sbjct: 245 LPNEIGNLQSLLTFDLHGNQLSEFPVSACSMRLSVLDLSNNNLSGLPPELGFMGSLRKLV 304

Query: 146 LHANRIIELPDSI--------------------GDLLSL----------------VYLDL 169
           L  N +  L  S+                    G++  +                  L L
Sbjct: 305 LTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARAAVSSKALSL 364

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI-G 228
               +  +P A+     L +LDL  N +  LP  +    S++ LI+  N ++E P ++  
Sbjct: 365 SDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSMEALILADNKIQEWPGSVFA 424

Query: 229 QCSSLRELRVDYNRLKALP----EAVGKIHTLEVLSVRYNNIKQLPT--TMSSLSSLREL 282
              +L+ L +  N + ALP     AV  +  L++  V    + QLP    +S ++ L+EL
Sbjct: 425 SLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGV----VAQLPPPPCLSLMTGLQEL 480

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS--IGNLEMLEELDISNNQIRVL 340
            +   ++ ++P  L   ++L  +++  N  ++  LP++  + +   LEELD+++N +  L
Sbjct: 481 RLMRTQMAAIPWDLPRMSSLRILDLSQN--NISVLPQASLLSSFITLEELDLTDNNLSTL 538

Query: 341 PDSFRMLS-RLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           P     L   LR L+V  NPL    R I+E G + ++QY+
Sbjct: 539 PPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKELLQYL 578



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 132/258 (51%), Gaps = 39/258 (15%)

Query: 81  ASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
           A+   VSSK     L+L +K +D++   P ++ +   LV LDL++N I  +P  +   +S
Sbjct: 352 AARAAVSSKA----LSLSDKNLDHV---PPAVWESCDLVQLDLAKNCIQELPPEMSMCTS 404

Query: 141 LKKLDLHANRIIELPDSI-GDLLSLVYLDLRGNQISAL-PVALSRLVRLEELDLGSNNLS 198
           ++ L L  N+I E P S+   L +L +L+L  N I AL P A S +  L+ LDL S  ++
Sbjct: 405 MEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDL-SGVVA 463

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP                      P  +   + L+ELR+   ++ A+P  + ++ +L +
Sbjct: 464 QLPP---------------------PPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRI 502

Query: 259 LSVRYNNIKQLP--TTMSSLSSLRELDVSFNELESVPESLCF-ATTLVKMNIGNNFADLR 315
           L +  NNI  LP  + +SS  +L ELD++ N L ++P  L +   TL K+ +  N   LR
Sbjct: 503 LDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGN--PLR 560

Query: 316 ALPRSI---GNLEMLEEL 330
           ++ R I   G  E+L+ L
Sbjct: 561 SIRRGILERGTKELLQYL 578


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 149/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L +++N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 31  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 90

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 91  ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 150

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+SIG+L+ LK L ++ N L ELP  +G   +L  L V  NRL+ LPE +  + +L
Sbjct: 151 IYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSL 210

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 211 TDLVISQNLLEIIPEGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTEN--RLLT 268

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 269 LPKSIGKLKKLSNLNADRNKLMSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SQATE 324

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 325 LHVLDVAGNR 334



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 148/274 (54%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 85  LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 144

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I +LP ++  L+ L++L L  N LS LP  +G+L +L  L V  N LE LP  I
Sbjct: 145 DLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEI 204

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +PE +GK+  L +L V  N + QLP T+    SL EL ++ N
Sbjct: 205 SGLTSLTDLVISQNLLEIIPEGIGKLKKLSILKVDQNRLTQLPETVGDCESLTELVLTEN 264

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 265 RLLTLPKSIGKLKKLSNLNADRN--KLMSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQA 322

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 323 TELHVLDVAGNRLLHLPLSLTALKLKAL--WLSD 354



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LPDS+ +L  L  LDL  N I ++P +IG L  LK L L  N++ ELP  +G+L +L
Sbjct: 128 LTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNL 187

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L  +P+ IG L  L  L V+ N L +LP
Sbjct: 188 LCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLSILKVDQNRLTQLP 247

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C SL EL +  NRL  LP+++GK+  L  L+   N +  LP  +    SL    V
Sbjct: 248 ETVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPKEIGGCCSLTVFCV 307

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 308 RDNRLTRIPAEVSQATELHVLDVAGN--RLLHLPLSLTALK-LKALWLSDNQ 356



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 133/254 (52%), Gaps = 2/254 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   D  GN 
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 81

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 82  LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 141

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N + +LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N LE +P
Sbjct: 142 EELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLP 201

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++      L  L
Sbjct: 202 EEISGLTSLTDLVISQNL--LEIIPEGIGKLKKLSILKVDQNRLTQLPETVGDCESLTEL 259

Query: 354 RVQENPLEVPPRNI 367
            + EN L   P++I
Sbjct: 260 VLTENRLLTLPKSI 273


>gi|410971089|ref|XP_003992006.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Felis catus]
          Length = 559

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP+S+ + S L  LDLS NR+ ++P ++  LS + ++ L  N + ++P  I    
Sbjct: 221 NNLLLLPESLCQCSKLSVLDLSHNRLHSLPHSLAELSGMTEIGLSGNHLEKVPRLICKWT 280

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR   + AL  +  RLV L  LDL  N+L   P  I +L +L+ L ++ N + +
Sbjct: 281 SLHLLYLRDTGLRALRRSFRRLVNLRFLDLSQNHLERFPLQICALRNLEILALDDNKICQ 340

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN---IKQLPTTMSSLSSL 279
           LP      S L+ L +  N+L + PE +  + +LE L +  +    +  +P  +S L +L
Sbjct: 341 LPPDFVSLSKLKMLGLTGNQLASFPEEILSLQSLEKLYIGQDQGAKLTYMPEDISKLQNL 400

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +EL +  N LE +P SL     L  +N  +N   L+ LP SI   + L+EL + +N I  
Sbjct: 401 KELYIENNHLEYLPTSLGSMPNLEILNCCHNL--LKQLPDSICQAQALKELLLEDNLITC 458

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSW 399
           LP++   L  L+VL +  NP+E PP  +   G QA+  Y+     KR+ K    K +  W
Sbjct: 459 LPENLDSLMNLKVLTLMSNPMEDPPGEVCAEGNQAIWTYLKT---KRNMKIMATKIQAWW 515



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/298 (31%), Positives = 154/298 (51%), Gaps = 6/298 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV +    R++ L+    +  E  P  +  LS+L  +DL +N++ A+P  IG L+ L+K 
Sbjct: 160 EVVNHTKLREIYLKQ---NQFEVFPPELCALSNLEIVDLDDNKLTAIPPEIGNLTRLQKF 216

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +  N ++ LP+S+     L  LDL  N++ +LP +L+ L  + E+ L  N+L  +P  I
Sbjct: 217 YVARNNLLLLPESLCQCSKLSVLDLSHNRLHSLPHSLAELSGMTEIGLSGNHLEKVPRLI 276

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
               SL  L +    L  L  +  +  +LR L +  N L+  P  +  +  LE+L++  N
Sbjct: 277 CKWTSLHLLYLRDTGLRALRRSFRRLVNLRFLDLSQNHLERFPLQICALRNLEILALDDN 336

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFADLRALPRSIGN 323
            I QLP    SLS L+ L ++ N+L S PE +    +L K+ IG +  A L  +P  I  
Sbjct: 337 KICQLPPDFVSLSKLKMLGLTGNQLASFPEEILSLQSLEKLYIGQDQGAKLTYMPEDISK 396

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           L+ L+EL I NN +  LP S   +  L +L    N L+  P +I +  AQA+ + + +
Sbjct: 397 LQNLKELYIENNHLEYLPTSLGSMPNLEILNCCHNLLKQLPDSICQ--AQALKELLLE 452



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 139/288 (48%), Gaps = 28/288 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE--LPDSIG- 159
           + IE +P  I  L ++  L L++N++  +   +G LSSL+ LDL  N ++   LP   G 
Sbjct: 58  NQIEEIPRGIQHLKNVRILYLNKNKLRKLCPELGTLSSLEGLDLSDNPLLSSALPVLRGL 117

Query: 160 ---DLLSLVYLDLR-------------------GNQISALPVALSRLVRLEELDLGSNNL 197
                L L + DL                    GN + +LP  +    +L E+ L  N  
Sbjct: 118 RGLRELRLYHTDLAEIPVDLCKLLHHLELLGLDGNHLKSLPKEVVNHTKLREIYLKQNQF 177

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
              P  + +L +L+ + ++ N L  +P  IG  + L++  V  N L  LPE++ +   L 
Sbjct: 178 EVFPPELCALSNLEIVDLDDNKLTAIPPEIGNLTRLQKFYVARNNLLLLPESLCQCSKLS 237

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL + +N +  LP +++ LS + E+ +S N LE VP  +C  T+L  + + +    LRAL
Sbjct: 238 VLDLSHNRLHSLPHSLAELSGMTEIGLSGNHLEKVPRLICKWTSLHLLYLRD--TGLRAL 295

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
            RS   L  L  LD+S N +   P     L  L +L + +N + ++PP
Sbjct: 296 RRSFRRLVNLRFLDLSQNHLERFPLQICALRNLEILALDDNKICQLPP 343



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 79/298 (26%), Positives = 125/298 (41%), Gaps = 50/298 (16%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +D S   +  +P  I G   L+++ L  N+I E+P  I  L ++  L L  N++  L   
Sbjct: 30  IDASNQGLPTIPPEIFGFEELEEVHLENNQIEEIPRGIQHLKNVRILYLNKNKLRKLCPE 89

Query: 181 LSRLVRLEELDLG----------------------------------------------- 193
           L  L  LE LDL                                                
Sbjct: 90  LGTLSSLEGLDLSDNPLLSSALPVLRGLRGLRELRLYHTDLAEIPVDLCKLLHHLELLGL 149

Query: 194 -SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N+L SLP  + +   L+++ ++ N  E  P  +   S+L  + +D N+L A+P  +G 
Sbjct: 150 DGNHLKSLPKEVVNHTKLREIYLKQNQFEVFPPELCALSNLEIVDLDDNKLTAIPPEIGN 209

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  L+   V  NN+  LP ++   S L  LD+S N L S+P SL   + + ++ +  N  
Sbjct: 210 LTRLQKFYVARNNLLLLPESLCQCSKLSVLDLSHNRLHSLPHSLAELSGMTEIGLSGNH- 268

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            L  +PR I     L  L + +  +R L  SFR L  LR L + +N LE  P  I  +
Sbjct: 269 -LEKVPRLICKWTSLHLLYLRDTGLRALRRSFRRLVNLRFLDLSQNHLERFPLQICAL 325


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/298 (31%), Positives = 153/298 (51%), Gaps = 2/298 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  +PDSI     L  LD+S N +  +P ++  L+ LK    +   + E+P  IG L 
Sbjct: 98  NDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEIPPEIGSLS 157

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +LV L+LR N I  LP++ S L +LE LDLG N L  LPD+IG L  L +L ++ N L  
Sbjct: 158 NLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLTT 217

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG+  +L+ L V  NR++ LPE +  + +L  L    N + +LP  +  L  L+ L
Sbjct: 218 LPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGIGCLIKLQIL 277

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  NE++ + + +   T L+++ +  N  +   LP +IG L  L  L+I  N++   P 
Sbjct: 278 KVDQNEIDEITDCIGGCTNLLEVVLSENVIEF--LPAAIGKLSNLTLLNIDRNRLFTFPP 335

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWV 400
                ++L VL  ++N +   P+ I    +  V+    + +E        +  K  W+
Sbjct: 336 EIGNCTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNKLESLPFAVSTLPLKALWL 393



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 125/229 (54%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            +L++L L  N++ +LP  I  +  L  L L  N+I  L   +S L+ LEELD   N++ 
Sbjct: 42  GTLEELSLEGNQLTDLPKGIFRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVR 101

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            +PDSI +   L  L + +N L ELP ++ + + L+    +   L  +P  +G +  L V
Sbjct: 102 VVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVV 161

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +R N IK LP + S LS L  LD+  NELE +P+++   T L+++ + NNF  L  LP
Sbjct: 162 LELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNF--LTTLP 219

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             IG L+ L+ LD+S N+I  LP+    L+ L  L    N L   P+ I
Sbjct: 220 SEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGI 268



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/269 (31%), Positives = 140/269 (52%), Gaps = 6/269 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP  I +++ L  L L++N I  +   I  L +L++LD   N +  +PDSI
Sbjct: 52  NQLTD----LPKGIFRMTKLRRLILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDSI 107

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
            +   L +LD+  N +  LP +L++L +L+        L+ +P  IGSL +L  L +  N
Sbjct: 108 QNCKKLTFLDISSNTLGELPDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELREN 167

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            ++ LP +    S L  L +  N L+ LP+ +G++  L  L +  N +  LP+ +  L +
Sbjct: 168 CIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELKA 227

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+ LDVS N +E +PE +   T+L  ++  +N   L  LP+ IG L  L+ L +  N+I 
Sbjct: 228 LQCLDVSENRIEELPEEISTLTSLTDLHCTSNA--LHELPQGIGCLIKLQILKVDQNEID 285

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            + D     + L  + + EN +E  P  I
Sbjct: 286 EITDCIGGCTNLLEVVLSENVIEFLPAAI 314



 Score = 47.8 bits (112), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 2/94 (2%)

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
            +L EL +  N+L  +P+ +   T L ++ + +N  +++ L   I +L  LEELD S N 
Sbjct: 42  GTLEELSLEGNQLTDLPKGIFRMTKLRRLILADN--EIQDLTNDISSLIALEELDFSKND 99

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +RV+PDS +   +L  L +  N L   P ++ ++
Sbjct: 100 VRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKL 133


>gi|255077272|ref|XP_002502281.1| predicted protein [Micromonas sp. RCC299]
 gi|226517546|gb|ACO63539.1| predicted protein [Micromonas sp. RCC299]
          Length = 228

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 128/204 (62%), Gaps = 3/204 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG+L+SLV L+L  N++ ++PA IG L+SL++L L  N++  +P+ I  L SLV L
Sbjct: 20  VPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVRL 79

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GN ++++P  + +L  LE L L  N L+S+P  IG L SL  L ++ N L  LP  I
Sbjct: 80  DLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSLPAEI 139

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL+EL ++ N+L +LP  +G++ ++E L +  N +  +P  +  L+SL +LD+  N
Sbjct: 140 GQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPAEIGQLTSLVDLDLGRN 199

Query: 288 ELESVPES---LCFATTLVKMNIG 308
           +L  VP +   L  A  +V +++G
Sbjct: 200 KLTRVPAAIRELRVAGCVVSLDVG 223



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/194 (39%), Positives = 117/194 (60%), Gaps = 1/194 (0%)

Query: 118 LVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +V L+L E  +  AVPA IG L+SL +L+L  N++  LP  IG L SL  L L  NQ+++
Sbjct: 6   VVKLELQECGLTGAVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTS 65

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           +P  + +L  L  LDL  N L+S+P  IG L SL+ L++  N L  +P  IGQ +SL  L
Sbjct: 66  VPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVL 125

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +D N+L +LP  +G++ +L+ L +  N +  LP  +  L+S+  L +  N+L SVP  +
Sbjct: 126 GLDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPAEI 185

Query: 297 CFATTLVKMNIGNN 310
              T+LV +++G N
Sbjct: 186 GQLTSLVDLDLGRN 199



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/217 (34%), Positives = 111/217 (51%), Gaps = 25/217 (11%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L SLV L+L GNQ+++LP  + +L  LEEL L  N L+S+P+ I  L SL +L
Sbjct: 20  VPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVRL 79

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            ++ N L  +P  IGQ +SL  L +  N+L ++P  +G++ +L VL +  N +  LP  +
Sbjct: 80  DLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSLPAEI 139

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L SL+EL ++ N+L S                         LP  IG L  +E L + 
Sbjct: 140 GQLVSLKELYLNGNQLTS-------------------------LPAEIGQLTSMEGLGLD 174

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            NQ+  +P     L+ L  L +  N L   P  I E+
Sbjct: 175 GNQLTSVPAEIGQLTSLVDLDLGRNKLTRVPAAIREL 211



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 115/226 (50%), Gaps = 11/226 (4%)

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
            R+V+LE  + G     ++P  IG L SL +L ++ N L  LP  IGQ +SL EL +D N
Sbjct: 4   GRVVKLELQECGLTG--AVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDEN 61

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +L ++PE + ++ +L  L +  N +  +P  +  L+SL  L +  N+L SVP  +   T+
Sbjct: 62  QLTSVPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTS 121

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  + +  N   L +LP  IG L  L+EL ++ NQ+  LP     L+ +  L +  N L 
Sbjct: 122 LTVLGLDGN--QLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLT 179

Query: 362 VPPRNIVEMGAQAVVQYMADLVEKRDAKTQ-PVKQKKSWVEMCFFS 406
             P  I ++ +      + DL   R+  T+ P   ++  V  C  S
Sbjct: 180 SVPAEIGQLTS------LVDLDLGRNKLTRVPAAIRELRVAGCVVS 219


>gi|332222157|ref|XP_003260233.1| PREDICTED: leucine-rich repeat-containing protein 40 [Nomascus
           leucogenys]
          Length = 602

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 177/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 146/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISVELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  AV++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAAVLEYLRDRI 600


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 103/325 (31%), Positives = 162/325 (49%), Gaps = 46/325 (14%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           LM+N +  LP SIGKLS L SL++  N++  +P  IG L  LK   L  N ++ELP +I 
Sbjct: 95  LMNNCLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIK 154

Query: 160 DLLSLVYLDLRGNQISALPVA-LSRLVRLEELDLGSNNLSSLPDSIGSLISLK------- 211
           + + L  L++ GN++  LP   LS+LV +  L L  NN +++P  +G+L  L+       
Sbjct: 155 NCVLLEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNN 214

Query: 212 -----------------KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
                            K+ +  N +  +P+ IG   SLRE+ +  N+L+ LPE +G++ 
Sbjct: 215 SVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLV 274

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT-----------TLV 303
            LE L +  NN+  LP + S L  LR LD+  N L  +PE    A            T +
Sbjct: 275 NLESLVLGNNNLSALPESASRLVKLRVLDLEGNRLTRLPEIGSLAALEELHAQSNRLTAL 334

Query: 304 KMNIGNNFA---------DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
             ++GN  A          L  LP SIG L+ L    +++N++  +P       +L++L 
Sbjct: 335 PQSLGNLHALRLFYVGENQLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKLQLLN 394

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYM 379
           + +NPL   P N+   G  AV+ Y+
Sbjct: 395 LDDNPLTAIPPNVTSGGPSAVMVYL 419



 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/310 (31%), Positives = 163/310 (52%), Gaps = 31/310 (10%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++LN+ +   +    +P  I ++  L  L L  N++  +   IG L+ L  L +  N+I 
Sbjct: 19  KNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNLTGLNILSIRNNKIT 78

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ELP S+G+L  L  LDL  N ++ALP ++ +L RL  L++  N L  LP+ IG+L+ LK 
Sbjct: 79  ELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKH 138

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---------------------- 250
             +  N L ELP  I  C  L EL V+ N+L  LP  +                      
Sbjct: 139 FGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPA 198

Query: 251 --GKIHTLEVLSVRYNNIKQLPTTM-SSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
             G +  LE+ ++  N+++++P  + SSL  L ++++++N + S+P  +    +L ++N+
Sbjct: 199 DLGALTKLEIFNMDNNSVREIPAGIFSSLKLLGKINLNYNSITSIPNDIGDLVSLREINL 258

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           G+N   L  LP ++G L  LE L + NN +  LP+S   L +LRVL ++ N L   P   
Sbjct: 259 GSN--KLELLPETLGQLVNLESLVLGNNNLSALPESASRLVKLRVLDLEGNRLTRLP--- 313

Query: 368 VEMGAQAVVQ 377
            E+G+ A ++
Sbjct: 314 -EIGSLAALE 322



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 132/268 (49%), Gaps = 33/268 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +  L +L  LDL  N+   VP  I  +  L KL L  N++  +   IG+L  L  L
Sbjct: 11  LPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNLTGLNIL 70

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +R N+I+ LP +L  L  L+ LDL +N L++LP SIG L                    
Sbjct: 71  SIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKL-------------------- 110

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              S L  L V+YN+L+ LPE +G +  L+   +RYN++ +LP  + +   L EL+V  N
Sbjct: 111 ---SRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGN 167

Query: 288 ELESVPESLCFATTLVKMN----IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +L  +P  +   + LV +N      NNF     +P  +G L  LE  ++ NN +R +P  
Sbjct: 168 KLVVLPTGIL--SQLVNVNNLQLSRNNFT---TIPADLGALTKLEIFNMDNNSVREIPAG 222

Query: 344 -FRMLSRLRVLRVQENPLEVPPRNIVEM 370
            F  L  L  + +  N +   P +I ++
Sbjct: 223 IFSSLKLLGKINLNYNSITSIPNDIGDL 250



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 71/132 (53%), Gaps = 2/132 (1%)

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           +R  + +L +LP+ +  +  L VL +R+N   ++P  +  +  L +L + +N+L  +   
Sbjct: 1   MRCYHPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHD 60

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +   T L  ++I NN   +  LP S+GNL  L+ LD+ NN +  LP S   LSRL  L V
Sbjct: 61  IGNLTGLNILSIRNN--KITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNV 118

Query: 356 QENPLEVPPRNI 367
           + N LE  P  I
Sbjct: 119 EYNKLERLPEEI 130


>gi|224058509|ref|XP_002188403.1| PREDICTED: leucine-rich repeat-containing protein 40 [Taeniopygia
           guttata]
          Length = 605

 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 167/278 (60%), Gaps = 4/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L + +  L +L  LD+ +N++ ++P+ +G L +L+KLD+  N++  LP+ +  L 
Sbjct: 94  NKLQSLSEDVQLLPALTVLDVHDNQLTSLPSALGQLENLQKLDVSHNKLRSLPEELLQLP 153

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L ++ N++S LP  L +L+ LEELD+ +N L+++P S   L++L +L +  N L+E
Sbjct: 154 HLRSLLVQHNELSQLPEGLGQLLSLEELDVSNNQLTAIPTSFALLVNLVRLNLACNQLKE 213

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +    SLR+L    N L+ +P  +  + +LE L +R N ++ LP  + S   L+EL
Sbjct: 214 LPADLSAMKSLRQLDCTKNYLETVPPKLATMASLEQLYLRKNKLRSLP-ELPSCKLLKEL 272

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
               N++E +  E+L   ++L  + + +N   ++A+P  I  L+ LE LD++NN I  LP
Sbjct: 273 HAGENQIEILNAENLKQLSSLCVLELRDN--KIKAVPEEITVLQKLERLDLANNDISRLP 330

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +   LS+L+ L ++ NPL    R++++ G Q +++Y+
Sbjct: 331 YTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYL 368



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 144/325 (44%), Gaps = 71/325 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP------- 155
           + ++ LP  +  + SL  LD ++N +  VP  +  ++SL++L L  N++  LP       
Sbjct: 209 NQLKELPADLSAMKSLRQLDCTKNYLETVPPKLATMASLEQLYLRKNKLRSLPELPSCKL 268

Query: 156 ----------------DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
                           +++  L SL  L+LR N+I A+P  ++ L +LE LDL +N++S 
Sbjct: 269 LKELHAGENQIEILNAENLKQLSSLCVLELRDNKIKAVPEEITVLQKLERLDLANNDISR 328

Query: 200 LPDSIGSLISLKKLIVETNDL-------------------------------EELPHT-- 226
           LP ++G+L  LK L +E N L                               EE P T  
Sbjct: 329 LPYTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKIQDDGPGPSEEPPVTAM 388

Query: 227 ---------IGQCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRY--NNIKQLPTTMS 274
                    I   ++L+ L     +   +PEAV   +    V +V +  N ++++P  + 
Sbjct: 389 TLPSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVATVNFSKNQLREIPPRLV 448

Query: 275 SLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
            L  S+ ++ + FN++  +   LC    L  +++ NN   L ALP  +  L+ L  ++++
Sbjct: 449 ELKDSVCDVSLGFNKISCISSGLCLLQKLTHLDLRNNV--LTALPEEMEALKRLHTINLA 506

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQEN 358
            N+ +V P     L  L  + +  N
Sbjct: 507 FNRFKVFPSVLYRLPALETILLSNN 531



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 150/348 (43%), Gaps = 51/348 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL SL E+ S K  ++L+      + IE L  +++ +LSSL  L+L +N+I AVP  I  
Sbjct: 256 KLRSLPELPSCKLLKELHAGE---NQIEILNAENLKQLSSLCVLELRDNKIKAVPEEITV 312

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L  L++LDL  N I  LP ++G+L  L +L L GN +                       
Sbjct: 313 LQKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTVRRDLLQKGTQELLKYLRSKI 372

Query: 177 -----------------LP----VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
                            LP    V +  +  L+ L+      + +P+++   +    +  
Sbjct: 373 QDDGPGPSEEPPVTAMTLPSQSKVNIHAITTLKLLEYSDKQAAEIPEAVFDAVGANPVAT 432

Query: 216 ---ETNDLEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
                N L E+P  + +   S+ ++ + +N++  +   +  +  L  L +R N +  LP 
Sbjct: 433 VNFSKNQLREIPPRLVELKDSVCDVSLGFNKISCISSGLCLLQKLTHLDLRNNVLTALPE 492

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            M +L  L  ++++FN  +  P  L     L  + + NN       P  +  L+ L  LD
Sbjct: 493 EMEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVG-SIDPVQLKGLDKLGTLD 551

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + NN +  +P        LR L ++ NP   P   ++  G  AV++Y+
Sbjct: 552 LQNNDLLQVPPELGNCENLRSLLLEGNPFRTPRAAVLAKGTAAVLEYL 599



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 29/181 (16%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           D++G  + + +++ S+N++  +P  +  L  S+  + L  N+I  +   +  L  L +LD
Sbjct: 423 DAVGA-NPVATVNFSKNQLREIPPRLVELKDSVCDVSLGFNKISCISSGLCLLQKLTHLD 481

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLP----------------DSIGS------ 206
           LR N ++ALP  +  L RL  ++L  N     P                + +GS      
Sbjct: 482 LRNNVLTALPEEMEALKRLHTINLAFNRFKVFPSVLYRLPALETILLSNNQVGSIDPVQL 541

Query: 207 --LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTLEVLSV 261
             L  L  L ++ NDL ++P  +G C +LR L ++ N  +    AV   G    LE L  
Sbjct: 542 KGLDKLGTLDLQNNDLLQVPPELGNCENLRSLLLEGNPFRTPRAAVLAKGTAAVLEYLRS 601

Query: 262 R 262
           R
Sbjct: 602 R 602


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE LP
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSRAAELHVLDVAGNRLSHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L+ L+ L + +N
Sbjct: 378 TALN-LKALWLSDN 390



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 26/291 (8%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ LP  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 354



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 AELHVLDVAGNRLSHLPLSLTALNLKAL--WLSD 389



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  LP  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENRLLTLPKSI 308



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL++L L AN++ ELP+    L+ L  L L  N+I  LP  ++  ++L ELD+  N++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPE 96

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P+SI    +L+      N L  LP +  +  +L  L V+   L++LPE +G ++ L  L
Sbjct: 97  IPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 156

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +  LP +++ L  L ELD+  NE+ ++PES+     L  + +  N   L  LP+
Sbjct: 157 ELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGN--QLSELPQ 214

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
            IGNL+ L  LD+S N++  LP+    L+ L  L + +N LE+ P  I ++   ++++
Sbjct: 215 EIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILK 272



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + + + L  L V  NRL  LP
Sbjct: 350 IPAEVSRAAELHVLDVAGNRLSHLP 374


>gi|402854920|ref|XP_003892099.1| PREDICTED: leucine-rich repeat-containing protein 40 [Papio anubis]
          Length = 602

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 175/308 (56%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQSESAAETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD + + +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILIKGTAAILEYLRDRI 600


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 101/322 (31%), Positives = 156/322 (48%), Gaps = 51/322 (15%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N +V +P  IG   +L+KL
Sbjct: 82  EIWQLKDLQKLNLNN---NKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKL 138

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV------------------- 185
           +L  N++  LP  IG L +L  L L  N++ +LP  + +L                    
Sbjct: 139 NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEV 198

Query: 186 ----RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD-- 239
                LE LDL SN L ++P  I  L SLK L++  N L  LP  I Q  +L+ L +   
Sbjct: 199 MLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGEN 258

Query: 240 ---------------------YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
                                YN+L   P+ VG++ +L+ LS+ +N I  LP  ++ L  
Sbjct: 259 RFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPD 318

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L+ L+ L++ NNQ+ 
Sbjct: 319 LQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQLKKLQRLELGNNQLT 376

Query: 339 VLPDSFRMLSRLRVLRVQENPL 360
            LP     L  L+ L +  NP+
Sbjct: 377 TLPKEIEQLKNLQRLELDSNPI 398



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L ++ N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/127 (29%), Positives = 65/127 (51%), Gaps = 2/127 (1%)

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
           K L +A+     +  L + +  +K LP  +  L +L++LD+  NE   + + +     L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           K+N+ NN   L  LP+ IG L+ L+EL + +N++  LP        L+ L +  N L V 
Sbjct: 91  KLNLNNN--KLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVL 148

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 149 PKEIGQL 155


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 89  LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 148

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE LP
Sbjct: 149 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 208

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 209 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 268

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 269 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSRAAELHVLDVAGNRLSHLPLSL 326

Query: 345 RMLSRLRVLRVQEN 358
             L+ L+ L + +N
Sbjct: 327 TALN-LKALWLSDN 339



 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 15  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 74

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 75  ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 134

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 135 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 194

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ LP  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 195 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 252

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    ++A  
Sbjct: 253 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV----SRAAE 308

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 309 LHVLDVAGNR 318



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 146/274 (53%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 69  LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 128

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 129 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 188

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 189 SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 248

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 249 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRA 306

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 307 AELHVLDVAGNRLSHLPLSLTALNLKAL--WLSD 338



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 2/254 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   D  GN 
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 65

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 66  LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRL 125

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N LE +P
Sbjct: 126 EELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 185

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + I  N   L  LP  IG L+ L  L +  N++  LP++      L  L
Sbjct: 186 EEISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTEL 243

Query: 354 RVQENPLEVPPRNI 367
            + EN L   P++I
Sbjct: 244 VLTENRLLTLPKSI 257



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/217 (31%), Positives = 119/217 (54%), Gaps = 2/217 (0%)

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L+ L  L L  N+I  LP  ++  ++L ELD+  N++  +P+SI    +L+      N L
Sbjct: 7   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 66

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
             LP +  +  +L  L V+   L++LPE +G ++ L  L +R N +  LP +++ L  L 
Sbjct: 67  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 126

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           ELD+  NE+ ++PES+     L  + +  N   L  LP+ IGNL+ L  LD+S N++  L
Sbjct: 127 ELDLGNNEIYNLPESIGALLHLKDLWLDGN--QLSELPQEIGNLKNLLCLDVSENRLERL 184

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+    L+ L  L + +N LE+ P  I ++   ++++
Sbjct: 185 PEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILK 221


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 99  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 158

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 159 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 218

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 219 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 278

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 279 TDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 336

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 337 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEV----SQATE 392

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 393 LHVLDVAGNR 402



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 87/234 (37%), Positives = 129/234 (55%), Gaps = 2/234 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           +++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL 
Sbjct: 172 SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLH 231

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +
Sbjct: 232 LKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVI 291

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+
Sbjct: 292 PDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLN 351

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
              N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++
Sbjct: 352 ADRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPSEVSQATELHVLDVAGNRL 403



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 2/253 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 153 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 212

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 213 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 272

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 273 SGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 332

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 333 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEVSQA 390

Query: 348 SRLRVLRVQENPL 360
           + L VL V  N L
Sbjct: 391 TELHVLDVAGNRL 403



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 84  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 143

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 144 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 203

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 204 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 263

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 264 RLERLPEEISGLTSLTDLVISQNL--LEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 321

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L  L + EN L   P++I ++
Sbjct: 322 ESLTELVLTENRLLTLPKSIGKL 344



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 2/242 (0%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N++  +P     L  L+KL L  N I  LP  I + + LV LD+  N I  +P ++S   
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
            L+  D   N L+ LP+S   L +L  L V    L+ LP  IG   +L  L +  N L  
Sbjct: 139 ALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 198

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP+++ ++  LE L +  N I  LP ++ +L  L++L +  N+L  +P+ +     L+ +
Sbjct: 199 LPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCL 258

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++  N   L  LP  I  L  L +L IS N + V+PD    L +L +L+V +N L   P 
Sbjct: 259 DVSEN--RLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPE 316

Query: 366 NI 367
            +
Sbjct: 317 AV 318



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 76/141 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 263 NRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 322

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 323 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 382

Query: 223 LPHTIGQCSSLRELRVDYNRL 243
           +P  + Q + L  L V  NRL
Sbjct: 383 IPSEVSQATELHVLDVAGNRL 403



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/84 (30%), Positives = 41/84 (48%), Gaps = 2/84 (2%)

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N I  +P+S   
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNDIPEIPESISF 136

Query: 347 LSRLRVLRVQENPLEVPPRNIVEM 370
              L++     NPL   P +  E+
Sbjct: 137 CKALQIADFSGNPLTRLPESFPEL 160


>gi|428174569|gb|EKX43464.1| hypothetical protein GUITHDRAFT_87793 [Guillardia theta CCMP2712]
          Length = 622

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 157/291 (53%), Gaps = 28/291 (9%)

Query: 108 LPDSIGKLSSLVSL--DLSENRIVAVPATI-GGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           LP S+  L++L  L    S NR+ ++P ++  G+ SL+KL  + NRI  LPD++  L +L
Sbjct: 288 LPRSLCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLANNNRISRLPDNVSSLTTL 347

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG------------------- 205
              +L  NQIS+LP +L  L  L+ L L  N L+S+PD  G                   
Sbjct: 348 QLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLP 407

Query: 206 ----SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
               SL+SL+ L V+ N ++ LP    + +SLR L +D N ++ L   + ++  L+ L +
Sbjct: 408 ASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRM 467

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R+N ++ LP  ++ L  LR LD+  N L  +P  +   T++V + +  N   L +LP SI
Sbjct: 468 RHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKN--SLESLPNSI 525

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           G+L  LE+L + +NQ+++LP +F  LS L  L +  N ++  P  I  M +
Sbjct: 526 GDLTNLEKLCLEDNQLQLLPPTFPSLSSLTYLDLSLNKIKFLPNQINRMKS 576



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 148/284 (52%), Gaps = 28/284 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP S   + +L  L L++N I  +P+  G   +L  LDL  N++  L   IG ++SL
Sbjct: 170 LDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHHLDLAGNQLEALAPEIGHVISL 229

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             ++L  N+I ++P     L  L ELDL  N +SS+P  +G L +L+ L V+ N L  LP
Sbjct: 230 SRVNLARNKIVSIPFEWGLLSNLSELDLSGNPISSIPQELGQLTALECLHVDRNPLTSLP 289

Query: 225 HTIGQCSSLRELRVDY--------------------------NRLKALPEAVGKIHTLEV 258
            ++   ++LR+L V +                          NR+  LP+ V  + TL++
Sbjct: 290 RSLCHLTNLRDLVVQFSNNRLTSLPPSLFDGMKSLRKLLANNNRISRLPDNVSSLTTLQL 349

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
            ++  N I  LP ++  L  L+ L +S NEL S+P+     T LV  N+ +N   L+ LP
Sbjct: 350 FNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSN--KLQGLP 407

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            S+ +L  L+ L++  N+I+ LPD+   L+ LR L +  N +E+
Sbjct: 408 ASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLNLDNNVIEL 451



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/271 (33%), Positives = 151/271 (55%), Gaps = 5/271 (1%)

Query: 100 KLMDN---IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD 156
           KL+ N   I  LPD++  L++L   +L +N+I ++P ++  L  L+ L L  N +  +PD
Sbjct: 326 KLLANNNRISRLPDNVSSLTTLQLFNLDDNQISSLPDSLCLLYDLQTLSLSHNELTSIPD 385

Query: 157 SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
             G L  LV  +L  N++  LP +LS LV L+ L++  N + SLPD+   L SL+ L ++
Sbjct: 386 QFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSLNLD 445

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
            N +E L   I Q   L+ LR+ +N+L+ LP  + ++  L  L +  N + QLP  + +L
Sbjct: 446 NNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVVGTL 505

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           +S+  L +  N LES+P S+   T L K+ + +N   L+ LP +  +L  L  LD+S N+
Sbjct: 506 TSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDN--QLQLLPPTFPSLSSLTYLDLSLNK 563

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           I+ LP+    +  L+    Q N + + P +I
Sbjct: 564 IKFLPNQINRMKSLQEAYFQRNEISILPSSI 594



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 123/226 (54%), Gaps = 23/226 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD  G L+ LVS +LS N++  +PA++  L SL+ L++  N+I  LPD+   L SL  L
Sbjct: 383 IPDQFGLLTGLVSCNLSSNKLQGLPASLSSLVSLQTLNVQENKIKSLPDNCSRLTSLRSL 442

Query: 168 DL-----------------------RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L                       R N++  LP  +++L +L  LDLG N L  LP  +
Sbjct: 443 NLDNNVIELLSPEISQLKVLQTLRMRHNKLRTLPWEIAQLEQLRHLDLGENRLMQLPAVV 502

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L S+  L+++ N LE LP++IG  ++L +L ++ N+L+ LP     + +L  L +  N
Sbjct: 503 GTLTSVVSLLLDKNSLESLPNSIGDLTNLEKLCLEDNQLQLLPPTFPSLSSLTYLDLSLN 562

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            IK LP  ++ + SL+E     NE+  +P S+   T L  +N+ NN
Sbjct: 563 KIKFLPNQINRMKSLQEAYFQRNEISILPSSISLCTGLHTLNLANN 608



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/279 (31%), Positives = 138/279 (49%), Gaps = 28/279 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D +E+ P S+  L  L +L+L  N++V +P  IG   S+K L LH N ++++   IG L 
Sbjct: 52  DLVEF-PSSLRSLKLLHTLELDANQLVKIPPAIGEFQSMKSLFLHNNCLVQIAPEIGQLG 110

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN-LSSLPDSIGSLISLKKLIVETNDLE 221
           +L  L L+GN++  +P+ L     L  L+L  NN L SLP  +G L  L +L +      
Sbjct: 111 NLKVLLLQGNRLHEVPLELCSCTALTTLNLQDNNKLQSLPMKVGRLTGLTRLFI------ 164

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
                            D N L +LP +   I TL  LS+  NNI  +P+   +  +L  
Sbjct: 165 ----------------ADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKALHH 208

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD++ N+LE++   +    +L ++N+  N   + ++P   G L  L ELD+S N I  +P
Sbjct: 209 LDLAGNQLEALAPEIGHVISLSRVNLARN--KIVSIPFEWGLLSNLSELDLSGNPISSIP 266

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGA--QAVVQY 378
                L+ L  L V  NPL   PR++  +      VVQ+
Sbjct: 267 QELGQLTALECLHVDRNPLTSLPRSLCHLTNLRDLVVQF 305



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/273 (30%), Positives = 145/273 (53%), Gaps = 8/273 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LPDS+  L  L +L LS N + ++P   G L+ L   +L +N++  LP S+  L+
Sbjct: 355 NQISSLPDSLCLLYDLQTLSLSHNELTSIPDQFGLLTGLVSCNLSSNKLQGLPASLSSLV 414

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L+++ N+I +LP   SRL  L  L+L +N +  L   I  L  L+ L +  N L  
Sbjct: 415 SLQTLNVQENKIKSLPDNCSRLTSLRSLNLDNNVIELLSPEISQLKVLQTLRMRHNKLRT 474

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q   LR L +  NRL  LP  VG + ++  L +  N+++ LP ++  L++L +L
Sbjct: 475 LPWEIAQLEQLRHLDLGENRLMQLPAVVGTLTSVVSLLLDKNSLESLPNSIGDLTNLEKL 534

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P +    ++L  +++  N   ++ LP  I  ++ L+E     N+I +LP 
Sbjct: 535 CLEDNQLQLLPPTFPSLSSLTYLDLSLN--KIKFLPNQINRMKSLQEAYFQRNEISILPS 592

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           S  + + L  L +  N +      + E+ +QA+
Sbjct: 593 SISLCTGLHTLNLANNQV------LFEVSSQAL 619



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 54/177 (30%), Positives = 87/177 (49%), Gaps = 2/177 (1%)

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LSSLP  I     L  + +  NDL E P ++     L  L +D N+L  +P A+G+  ++
Sbjct: 30  LSSLPQQIRLSERLVSIKLSNNDLVEFPSSLRSLKLLHTLELDANQLVKIPPAIGEFQSM 89

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           + L +  N + Q+   +  L +L+ L +  N L  VP  LC  T L  +N+ +N   L++
Sbjct: 90  KSLFLHNNCLVQIAPEIGQLGNLKVLLLQGNRLHEVPLELCSCTALTTLNLQDN-NKLQS 148

Query: 317 LPRSIGNLEMLEELDISN-NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LP  +G L  L  L I++ N +  LP SF  +  L  L + +N +   P +     A
Sbjct: 149 LPMKVGRLTGLTRLFIADGNLLDSLPASFSYIETLTHLSLADNNISDIPSDFGNFKA 205


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 142/260 (54%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            PD I KL +L  L  +++ I  +P  I  L  L++LDL  NRI +LP ++  L  L  L
Sbjct: 143 FPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLESL 202

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+ ++LP  ++ L  L+EL+L  N L  +P  IG+   ++ L +    L E+P T+
Sbjct: 203 ILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDTL 262

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L EL + +N L+  P ++ K+  L+ L +  N I  +P+ +S+L ++ EL+V+ N
Sbjct: 263 SNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSN 322

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L + PE +   T L K+++   F  +  +P SI  L+ LE LDI+ NQ    P     L
Sbjct: 323 KLYNFPEEITSLTKLKKLDLS--FNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSL 380

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           ++L VL +  N ++  P +I
Sbjct: 381 TKLEVLYLSSNSIQTIPLSI 400



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/271 (32%), Positives = 149/271 (54%), Gaps = 9/271 (3%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+ + K  R+L+L QN+    IE LP ++ KL+ L SL L+ N   ++P  I  L+SLK+
Sbjct: 169 EIENLKMLRELDLSQNR----IEKLPKNLSKLNRLESLILNHNEFTSLPKQIATLTSLKE 224

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N +  +P  IG+   +  L +   ++  +P  LS L++LEELD+G N+L   P S
Sbjct: 225 LNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDTLSNLLKLEELDIGFNHLREFPIS 284

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L  LKKL +  N +  +P  I    ++ EL V+ N+L   PE +  +  L+ L + +
Sbjct: 285 IIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLYNFPEEITSLTKLKKLDLSF 344

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N I Q+P ++  L  L  LD++ N+  S P+ +   T L  + + +N   ++ +P SI  
Sbjct: 345 NTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSLTKLEVLYLSSN--SIQTIPLSIEK 402

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           L  LEEL+   N +    ++ +M++  + L+
Sbjct: 403 LTNLEELNCRQNPLSA--ETIKMINESKALK 431



 Score =  114 bits (286), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 133/279 (47%), Gaps = 26/279 (9%)

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ---- 173
           +V L    N +  VP  I  L  LKKL    N I +LP  + +L  L  L++  N     
Sbjct: 83  VVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELEIDNNYGLKH 142

Query: 174 --------------------ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
                               I+ +P  +  L  L ELDL  N +  LP ++  L  L+ L
Sbjct: 143 FPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNLSKLNRLESL 202

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           I+  N+   LP  I   +SL+EL +  N L+ +P  +G    + VLS+    + ++P T+
Sbjct: 203 ILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISATRLIEIPDTL 262

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           S+L  L ELD+ FN L   P S+   T L K++I  N   +  +P  I  L+ +EEL+++
Sbjct: 263 SNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISAN--RISNIPSQISALKNVEELNVN 320

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           +N++   P+    L++L+ L +  N +   P +I ++  
Sbjct: 321 SNKLYNFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKG 359



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 128/262 (48%), Gaps = 32/262 (12%)

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV---- 185
            V +T  G+    KLD   +  I+ P +      +V L    N++  +PV +++L+    
Sbjct: 55  TVNSTWWGI----KLDTIKSSTIKSPQNAK--FRVVELKFYRNELKIVPVEIAQLIHLKK 108

Query: 186 -------------------RLEELDLGSN-NLSSLPDSIGSLISLKKLIVETNDLEELPH 225
                              +LEEL++ +N  L   PD I  L +LK L    + + ++P 
Sbjct: 109 LSFPHNWIDDLPAELANLDKLEELEIDNNYGLKHFPDVITKLKNLKVLKFTDSFITKIPK 168

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I     LREL +  NR++ LP+ + K++ LE L + +N    LP  +++L+SL+EL++S
Sbjct: 169 EIENLKMLRELDLSQNRIEKLPKNLSKLNRLESLILNHNEFTSLPKQIATLTSLKELNLS 228

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            NELE +P  +     +  ++I      L  +P ++ NL  LEELDI  N +R  P S  
Sbjct: 229 MNELEVIPSFIGNYREMRVLSISA--TRLIEIPDTLSNLLKLEELDIGFNHLREFPISII 286

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L++L+ L +  N +   P  I
Sbjct: 287 KLTKLKKLDISANRISNIPSQI 308


>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 285

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 74/201 (36%), Positives = 122/201 (60%), Gaps = 2/201 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLSE ++  +P  IG L +L+ L+L  N++  LP+ IG L +   L L  N+++ LP  
Sbjct: 51  LDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKE 110

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L EL L +N  ++ P  IG L +L++L +  N L+ LP+ IGQ  +LREL + Y
Sbjct: 111 IGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLKNLRELHLSY 170

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+LK +PE  G++  L++LS+  N +  LP  +  L +LREL +S+N+L+++   +    
Sbjct: 171 NQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK 230

Query: 301 TLVKMNIGNNFADLRALPRSI 321
            L K+++ +N   L  LP+ I
Sbjct: 231 NLKKLSLRDN--QLTTLPKEI 249



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 66/179 (36%), Positives = 102/179 (56%), Gaps = 10/179 (5%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N++WL          P+ IG+L +  +L LS+NR+  +P  IG L +L++L L+ N+ 
Sbjct: 68  LQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQF 127

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
              P  IG L +L  L+L  NQ+  LP  + +L  L EL L  N L ++P+  G L +L+
Sbjct: 128 TAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLKNLRELHLSYNQLKTVPEETGQLKNLQ 187

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
            L +  N L  LP+ I Q  +LREL + YN+LK L   +G++  L+ LS+R N +  LP
Sbjct: 188 MLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLP 246



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 122/215 (56%), Gaps = 2/215 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  LDL   ++  LP  + +L  L+ L+L +N L++LP+ IG L + + 
Sbjct: 37  DLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQT 96

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L++  N L  LP  IGQ  +LREL ++ N+  A P+ +G++  L+ L++  N +K LP  
Sbjct: 97  LVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNE 156

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +LREL +S+N+L++VPE       L  +++  N   L  LP  I  L+ L EL +
Sbjct: 157 IGQLKNLRELHLSYNQLKTVPEETGQLKNLQMLSLNAN--QLTTLPNEIRQLKNLRELHL 214

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           S NQ++ L      L  L+ L +++N L   P+ I
Sbjct: 215 SYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 249



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 48/151 (31%), Positives = 82/151 (54%), Gaps = 2/151 (1%)

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L+ LP  IGQ  +L+ L +  N+L  LPE +G++   + L +  N +  LP  +  L +L
Sbjct: 58  LKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNL 117

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           REL ++ N+  + P+ +     L ++N+  N   L+ LP  IG L+ L EL +S NQ++ 
Sbjct: 118 RELYLNTNQFTAFPKEIGQLKNLQQLNLYAN--QLKTLPNEIGQLKNLRELHLSYNQLKT 175

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +P+    L  L++L +  N L   P  I ++
Sbjct: 176 VPEETGQLKNLQMLSLNANQLTTLPNEIRQL 206



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 3/120 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL     + ++ LP+ IG+L +L  L LS N++  VP   G L +L+ L
Sbjct: 133 EIGQLKNLQQLNL---YANQLKTLPNEIGQLKNLRELHLSYNQLKTVPEETGQLKNLQML 189

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+AN++  LP+ I  L +L  L L  NQ+  L   + +L  L++L L  N L++LP  I
Sbjct: 190 SLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 249


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L ++ N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|255088281|ref|XP_002506063.1| predicted protein [Micromonas sp. RCC299]
 gi|226521334|gb|ACO67321.1| predicted protein [Micromonas sp. RCC299]
          Length = 250

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 142/232 (61%), Gaps = 2/232 (0%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           +++L+L++  +  +P  +  L +L  L+LRGNQ++++P  + +L  LE LDL +N L+S+
Sbjct: 6   VEELELYSLGLCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSV 65

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P+ IG L SL++L++  N L  LP  I Q +SLR+L +D N+L  LP  +G++ +L+ LS
Sbjct: 66  PEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELS 125

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           + +N + +LP  +  L+SL+ L +S N+L SVP  +   T+L ++++G N   L ++P  
Sbjct: 126 LYHNGLTRLPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNL--LTSVPAE 183

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           IG L  L  L + +N++  +P     L+ L+ L +  N L   P  I E+ A
Sbjct: 184 IGQLTSLRVLYLFDNKLTSVPAEIEQLTSLKELWLFNNKLTSLPAAIRELRA 235



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 127/220 (57%), Gaps = 2/220 (0%)

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           + AVPA +  LS+L+KL+L  N++  +P  I  L SL  LDL  NQ++++P  +  L  L
Sbjct: 16  LCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSL 75

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
            EL L  N L+ LP  I  L SL+KL ++ N L  LP  IGQ  SL+EL + +N L  LP
Sbjct: 76  RELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTRLP 135

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI 307
             +GK+ +L+ L +  N +  +P  +  L+SL+EL +  N L SVP  +   T+L  + +
Sbjct: 136 AKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNLLTSVPAEIGQLTSLRVLYL 195

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            +N   L ++P  I  L  L+EL + NN++  LP + R L
Sbjct: 196 FDN--KLTSVPAEIEQLTSLKELWLFNNKLTSLPAAIREL 233



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 133/220 (60%), Gaps = 2/220 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + +LS+L  L+L  N++ +VPA I  L+SL++LDL+ N++  +P+ IG L SL  L
Sbjct: 19  VPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSLREL 78

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GNQ++ LP  + +L  L +L L  N L+ LP  IG L SLK+L +  N L  LP  I
Sbjct: 79  VLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTRLPAKI 138

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ +SL+ L +  N+L ++P  + ++ +L+ LS+  N +  +P  +  L+SLR L +  N
Sbjct: 139 GKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNLLTSVPAEIGQLTSLRVLYLFDN 198

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
           +L SVP  +   T+L ++ + NN   L +LP +I  L  +
Sbjct: 199 KLTSVPAEIEQLTSLKELWLFNN--KLTSLPAAIRELRAM 236



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 119/221 (53%), Gaps = 5/221 (2%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           R+EEL+L S  L ++P  +  L +L+KL +  N L  +P  I Q +SL  L ++ N+L +
Sbjct: 5   RVEELELYSLGLCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTS 64

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +PE +G + +L  L +  N + +LP  +  L+SLR+L +  N+L  +P  +    +L ++
Sbjct: 65  VPEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKEL 124

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           ++ +N   L  LP  IG L  L+ L +S NQ+  +P   R L+ L+ L +  N L   P 
Sbjct: 125 SLYHN--GLTRLPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQELSLGGNLLTSVPA 182

Query: 366 NIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFS 406
            I ++ +  V+ Y+ D   K  +    ++Q  S  E+  F+
Sbjct: 183 EIGQLTSLRVL-YLFD--NKLTSVPAEIEQLTSLKELWLFN 220


>gi|260841659|ref|XP_002614028.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
 gi|229299418|gb|EEN70037.1| hypothetical protein BRAFLDRAFT_67388 [Branchiostoma floridae]
          Length = 1609

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 143/261 (54%), Gaps = 3/261 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LP  +G L+ L  L ++ NR +  +P  +  ++++K+LDL   ++  LP  +G L  L +
Sbjct: 332 LPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEW 391

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LDL  N +  LP  L  +  ++ LDL    L +LP  +G L  LK L V+ N L+ LP  
Sbjct: 392 LDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGE 451

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +GQ +S++ L +    L  LP  VG +  LE L V  N ++ LP  +  +++++ LD+S 
Sbjct: 452 LGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSS 511

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
             L+++P  +   T L  +++  N   L+ LP+ IG L  ++ L++S  Q+  LP     
Sbjct: 512 CWLDTLPPEVGTLTQLEWLSLQGN--PLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGT 569

Query: 347 LSRLRVLRVQENPLEVPPRNI 367
           L +L  L +Q NPL++ P+ +
Sbjct: 570 LKQLEWLSLQGNPLQMLPKQV 590



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 145/251 (57%), Gaps = 2/251 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L+ L  LDLS N +  +P  +G ++++K+LDL   ++  LP  +G L  L +L
Sbjct: 379 LPPEVGTLTQLEWLDLSFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWL 438

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            ++ N +  LP  L ++  ++ LDL +  L +LP  +G+L  L++L V  N L+ LP  +
Sbjct: 439 KVKNNPLQTLPGELGQVASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGEL 498

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + ++++ L +    L  LP  VG +  LE LS++ N ++ LP  +  L++++ L++SF 
Sbjct: 499 WKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFC 558

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P  +     L  +++  N   L+ LP+ + NL  ++ +++S+ ++++LP  F  L
Sbjct: 559 QLHTLPPEMGTLKQLEWLSLQGN--PLQMLPKQVENLTHIKWMNLSHCRLQMLPPEFGKL 616

Query: 348 SRLRVLRVQEN 358
           ++L  L +  N
Sbjct: 617 TQLERLYLSCN 627



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/297 (28%), Positives = 145/297 (48%), Gaps = 24/297 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G L+ L  L ++ N +  +P  +  ++++K+LDL +  +  LP  +G L  L +L
Sbjct: 471 LPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLDTLPPEVGTLTQLEWL 530

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L+GN +  LP  + +L  ++ L+L    L +LP  +G+L  L+ L ++ N L+ LP  +
Sbjct: 531 SLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQV 590

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN------------NIKQL------ 269
              + ++ + + + RL+ LP   GK+  LE L +  N            NIK L      
Sbjct: 591 ENLTHIKWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHLDLSNCS 650

Query: 270 ----PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
               P  +  L  +  L +S N L+ +P  +   T +  +++ N    L  LP  +G + 
Sbjct: 651 LQTLPPEVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSN--CRLNELPIEVGTMT 708

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
            L +LD+  NQ+++LP        L  L V+ NPL  PP  +   G  AV QY  +L
Sbjct: 709 QLRQLDLRYNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEVCSQGMVAVRQYFEEL 765



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 146/281 (51%), Gaps = 26/281 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD +  L ++  L L+   +  VP  +  LS L+KLDL  N+ I+L D +  L +L  L
Sbjct: 217 LPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQIKLSDQLLGLTNLKVL 276

Query: 168 DLRGNQISALP-----------------------VALSRLVRLEELDLGSNNLSSLPDSI 204
            L   +++++P                       V + +L R++ LDL + +L +LP  +
Sbjct: 277 RLSRTEMASVPEVVWKLTHLEELHLLSNPLQTLSVKVGQLSRIKRLDLSNCHLRTLPPEV 336

Query: 205 GSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           G+L  L++L V  N  L+ LP  + Q ++++ L +   +L  LP  VG +  LE L + +
Sbjct: 337 GTLTQLERLKVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPPEVGTLTQLEWLDLSF 396

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N ++ LP  +  +++++ LD+S  +L ++P  +   T L  + + NN   L+ LP  +G 
Sbjct: 397 NTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNN--PLQTLPGELGQ 454

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +  ++ LD+SN  +  LP     L++L  L+V  NPL+  P
Sbjct: 455 VASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLP 495



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/286 (27%), Positives = 142/286 (49%), Gaps = 25/286 (8%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + ++ LP  +G ++++  LDLS  ++  +P  +G L+ LK L +  N +  LP  +G +
Sbjct: 396 FNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLKVKNNPLQTLPGELGQV 455

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            S+ +LDL    +  LP  +  L +LE L + +N L +LP  +  + ++K+L + +  L+
Sbjct: 456 ASIKHLDLSNCWLHTLPPEVGTLTQLERLKVANNPLQTLPGELWKVTNIKRLDLSSCWLD 515

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  +G  + L  L +  N L+ LP+ +G++  ++ L++ +  +  LP  M +L  L  
Sbjct: 516 TLPPEVGTLTQLEWLSLQGNPLQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEW 575

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE------------- 328
           L +  N L+ +P+ +   T +  MN+ +    L+ LP   G L  LE             
Sbjct: 576 LSLQGNPLQMLPKQVENLTHIKWMNLSH--CRLQMLPPEFGKLTQLERLYLSCNGELQTL 633

Query: 329 ---------ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPP 364
                     LD+SN  ++ LP     L  +  LR+  NPL+ +PP
Sbjct: 634 PTRQLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRLSSNPLQKLPP 679



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 159/325 (48%), Gaps = 54/325 (16%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVP--------------------ATIGGL----- 138
           N++ LP  + KLS L  LD+S+N+ +++P                     TIG       
Sbjct: 142 NLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKLRDCDLVTIGRQIFQQE 201

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           S L++LDL  N  I+LPD +  L ++  L L    ++ +P A+  L +LE+LDL  N   
Sbjct: 202 SQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQLEKLDLSGNKQI 261

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTI-----------------------GQCSSLRE 235
            L D +  L +LK L +   ++  +P  +                       GQ S ++ 
Sbjct: 262 KLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSNPLQTLSVKVGQLSRIKR 321

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELESVPE 294
           L +    L+ LP  VG +  LE L V  N  ++ LP  +  +++++ LD+S  +L ++P 
Sbjct: 322 LDLSNCHLRTLPPEVGTLTQLERLKVANNRALQTLPGELWQVTNIKRLDLSNCQLHTLPP 381

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +   T L  +++  +F  L+ LPR +G++  ++ LD+S+ Q+  LP     L+ L+ L+
Sbjct: 382 EVGTLTQLEWLDL--SFNTLQTLPRELGHVTNIKRLDLSHCQLHTLPPQVGKLTHLKWLK 439

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYM 379
           V+ NPL+  P    E+G  A ++++
Sbjct: 440 VKNNPLQTLPG---ELGQVASIKHL 461



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/215 (27%), Positives = 106/215 (49%), Gaps = 22/215 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP  IG+L+++  L+LS  ++  +P  +G L  L+ L L  N +  LP  + +L  +
Sbjct: 537 LQMLPKQIGQLTAIKHLNLSFCQLHTLPPEMGTLKQLEWLSLQGNPLQMLPKQVENLTHI 596

Query: 165 VYLDLRGNQISALPVALSRLVRLE----------------------ELDLGSNNLSSLPD 202
            +++L   ++  LP    +L +LE                       LDL + +L +LP 
Sbjct: 597 KWMNLSHCRLQMLPPEFGKLTQLERLYLSCNGELQTLPTRQLTNIKHLDLSNCSLQTLPP 656

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            +G L  ++ L + +N L++LP  +   ++++ L +   RL  LP  VG +  L  L +R
Sbjct: 657 EVGELKHVEYLRLSSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLRQLDLR 716

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           YN ++ LP  ++   +L  LDV  N L   P  +C
Sbjct: 717 YNQLQMLPVEITQHINLYHLDVRGNPLIRPPAEVC 751



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 113/221 (51%), Gaps = 12/221 (5%)

Query: 75  LSLIKLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           LS  +L +L  E+ + K    L+LQ    + ++ LP  +  L+ +  ++LS  R+  +P 
Sbjct: 555 LSFCQLHTLPPEMGTLKQLEWLSLQG---NPLQMLPKQVENLTHIKWMNLSHCRLQMLPP 611

Query: 134 TIGGLSSLKKLDLHANRIIE-LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
             G L+ L++L L  N  ++ LP     L ++ +LDL    +  LP  +  L  +E L L
Sbjct: 612 EFGKLTQLERLYLSCNGELQTLPTR--QLTNIKHLDLSNCSLQTLPPEVGELKHVEYLRL 669

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
            SN L  LP  +  L ++K L +    L ELP  +G  + LR+L + YN+L+ LP  + +
Sbjct: 670 SSNPLQKLPPEVRHLTNIKHLDMSNCRLNELPIEVGTMTQLRQLDLRYNQLQMLPVEITQ 729

Query: 253 IHTLEVLSVRYNNIKQLPTTMSS--LSSLRELDVSFNELES 291
              L  L VR N + + P  + S  + ++R+    F ELES
Sbjct: 730 HINLYHLDVRGNPLIRPPAEVCSQGMVAVRQY---FEELES 767



 Score = 58.2 bits (139), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 129/282 (45%), Gaps = 29/282 (10%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M   EW    +GK   L +LDLS      +P  +  L  L+ L L  N  I L + +  L
Sbjct: 73  MKREEW--KILGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESISLSNKLVKL 130

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD------------------- 202
            +L  L L    +  LP  + +L  L+ LD+  N   SLP                    
Sbjct: 131 TNLKVLCLENCNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKLRDCDL 190

Query: 203 -SIGSLISLKKLIVETNDLE-----ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            +IG  I  ++  +E  DL      +LP  +    ++R LR++   +  +P AV ++  L
Sbjct: 191 VTIGRQIFQQESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLELSQL 250

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           E L +  N   +L   +  L++L+ L +S  E+ SVPE +   T L ++++ +N   L+ 
Sbjct: 251 EKLDLSGNKQIKLSDQLLGLTNLKVLRLSRTEMASVPEVVWKLTHLEELHLLSN--PLQT 308

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           L   +G L  ++ LD+SN  +R LP     L++L  L+V  N
Sbjct: 309 LSVKVGQLSRIKRLDLSNCHLRTLPPEVGTLTQLERLKVANN 350



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 84/168 (50%), Gaps = 2/168 (1%)

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +G    L  L +   + ++LP  + +   L  L++ YN   +L   + K+  L+VL +  
Sbjct: 81  LGKAQPLWTLDLSNQNHKDLPDEVFELEELEALKLTYNESISLSNKLVKLTNLKVLCLEN 140

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
            N+ +LP  +  LS L+ LD+S N+  S+P+ +      +K+    +  DL  + R I  
Sbjct: 141 CNLDKLPPVVLKLSHLQVLDISKNKAISLPKMILKKLKKLKVLKLRD-CDLVTIGRQIFQ 199

Query: 324 LE-MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            E  LEELD+S N    LPD  R L  +RVLR+    +   P  ++E+
Sbjct: 200 QESQLEELDLSGNMQIDLPDELRTLKNIRVLRLNRAGMTTVPPAVLEL 247


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/276 (34%), Positives = 152/276 (55%), Gaps = 5/276 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL N   + +  LP  IG+L +L  L L  N+++++P  I  L SLK L
Sbjct: 128 EIGQFKNLQKLNLDN---NKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL+ N    +   +  L +L  LDLR N++  +P  + +L  L+ L L  N L+SLP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +LK L +  N  +  P  I +  +L EL + YN+L   P+ VG++ +L+ LS+ +N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  LP  ++ L  L+EL +S N++  +P+ +     L  +++ NN   L ALP+ IG L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNN--KLNALPKEIGQL 362

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + L+ L++ NNQ+  LP     L  L+ L +  NP+
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPI 398



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 148/287 (51%), Gaps = 21/287 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDL  N    +   I  L  L+KL+L+ N++  LP  IG L +L
Sbjct: 53  LKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNL 112

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N++  LP  + +   L++L+L +N L+ LP  IG L +L++L + +N L  LP
Sbjct: 113 QELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLP 172

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I Q  SL+ L ++ N    + + V  + TLE L +R N +K +P  +  L SL+ L +
Sbjct: 173 TEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLML 232

Query: 285 SFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGN 323
           + N+L S+P+ +     L  +N+G N                     +  L   P+ +G 
Sbjct: 233 TGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQ 292

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L + +NQI  LP     L  L+ L +  N + + P+ I+++
Sbjct: 293 LKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQL 339



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 141/263 (53%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+  +L  L+L  N++  +P  IG L +L++L L +N++I LP  I  L SL  L
Sbjct: 125 LPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ + +   +  L  LE LDL SN L ++P  I  L SLK L++  N L  LP  I
Sbjct: 185 DLNNNEFTTVSKEVMLLETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  NR +  P  + ++  L  L++ YN + + P  +  L SL+ L +  N
Sbjct: 245 EQLQNLKTLNLGENRFQIFPVEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++ ++P  +     L ++++  N   +  LP+ I  L+ LE L +SNN++  LP     L
Sbjct: 305 QITTLPVEVTQLPDLQELHLSGN--KITILPKEILQLKNLEWLSLSNNKLNALPKEIGQL 362

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L+ L +  N L   P+ I ++
Sbjct: 363 KKLQRLELGNNQLTTLPKEIEQL 385



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 134/229 (58%), Gaps = 2/229 (0%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           + ++ LDL    +  LP+ IG L +L  LDL GN+ + L   + +L  L++L+L +N L+
Sbjct: 41  ADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLT 100

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG L +L++L + +N+L  LP  IGQ  +L++L +D N+L  LP+ +G++  L+ 
Sbjct: 101 VLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE 160

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           LS+  N +  LPT +  L SL+ LD++ NE  +V + +    TL  +++ +N   L+ +P
Sbjct: 161 LSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSN--KLKTIP 218

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + I  L+ L+ L ++ NQ+  LP     L  L+ L + EN  ++ P  I
Sbjct: 219 KEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEI 267



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/96 (37%), Positives = 53/96 (55%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS N+I  +P  I  L +L+ L L  N++  LP  IG L 
Sbjct: 304 NQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNALPKEIGQLK 363

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            L  L+L  NQ++ LP  + +L  L+ L+L SN +S
Sbjct: 364 KLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS 399


>gi|167519697|ref|XP_001744188.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163777274|gb|EDQ90891.1| predicted protein [Monosiga brevicollis MX1]
          Length = 570

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/326 (30%), Positives = 174/326 (53%), Gaps = 14/326 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+ +  L  L  LD  +N+I  +   +G L+ LK L+L  N +  LP S+  L 
Sbjct: 67  NQLTTLPEQLELLPDLTLLDAHDNKITVISERLGQLAQLKALNLGQNCLENLPQSLYHLP 126

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N + +L  AL +L  L ELD   N L  LP+S+  L  L +L +  N LE 
Sbjct: 127 ALQSLKLDNNALRSLAPALRQLSELRELDASHNRLVELPESLCDLPHLARLRLGHNQLES 186

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP   GQ  +L+EL + +NRL +LP  +G +  +  L VRYN +++LP +++S++ L+EL
Sbjct: 187 LPAPFGQLEALQELDIVHNRLTSLPTKLGSLSHITRLDVRYNALQRLP-SLASMTQLKEL 245

Query: 283 DVSFNELESVPE-SLCFATTLVKMNIGNN-FADLRALPRSIGNLEMLEELDISNNQIRVL 340
            V +N++ ++ +        LV +++ +N  AD   +P +I  L  LE L++SNN I  L
Sbjct: 246 LVGYNQIHTLGDLGALLPAGLVLLDVRDNKIAD---IPATIAALRQLERLELSNNDISSL 302

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM-------ADLVEKRDAKTQPV 393
           P    ++  ++ + +  NPL    R+IV  G  A+++++       A++  +     + V
Sbjct: 303 PPELGLVRSIKAISLDGNPLRSLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAEQV 362

Query: 394 KQKKSWVEMCFFSRSNKRKRNGMDYV 419
            Q++   ++      N   + G+D+V
Sbjct: 363 AQRERQTDLAQTGALNLSNQ-GLDHV 387



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 138/243 (56%), Gaps = 12/243 (4%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           + LNL    ++N   LP S+  L +L SL L  N + ++   +  LS L++LD   NR++
Sbjct: 106 KALNLGQNCLEN---LPQSLYHLPALQSLKLDNNALRSLAPALRQLSELRELDASHNRLV 162

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           ELP+S+ DL  L  L L  NQ+ +LP    +L  L+ELD+  N L+SLP  +GSL  + +
Sbjct: 163 ELPESLCDLPHLARLRLGHNQLESLPAPFGQLEALQELDIVHNRLTSLPTKLGSLSHITR 222

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI--HTLEVLSVRYNNIKQLP 270
           L V  N L+ LP ++   + L+EL V YN++  L + +G +    L +L VR N I  +P
Sbjct: 223 LDVRYNALQRLP-SLASMTQLKELLVGYNQIHTLGD-LGALLPAGLVLLDVRDNKIADIP 280

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI---GNLEML 327
            T+++L  L  L++S N++ S+P  L    ++  +++  N   LR+L R I   G L +L
Sbjct: 281 ATIAALRQLERLELSNNDISSLPPELGLVRSIKAISLDGN--PLRSLRRDIVRRGTLAIL 338

Query: 328 EEL 330
           E L
Sbjct: 339 EHL 341



 Score = 79.3 bits (194), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 138/304 (45%), Gaps = 43/304 (14%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           + LV LD+ +N+I  +PATI  L  L++L+L  N I  LP  +G + S+  + L GN + 
Sbjct: 264 AGLVLLDVRDNKIADIPATIAALRQLERLELSNNDISSLPPELGLVRSIKAISLDGNPLR 323

Query: 176 ALPVALSR---------------------------------------LVRLEELDLGSNN 196
           +L   + R                                       L +   L+L +  
Sbjct: 324 SLRRDIVRRGTLAILEHLRSRLPETAEVEPEAQQYAEQVAQRERQTDLAQTGALNLSNQG 383

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS-LRELRVDYNRLKALPEAVGKIHT 255
           L  +P  I    ++++  ++ N L  LP  + Q SS L  L + +NRL  L  A+G +  
Sbjct: 384 LDHVPSDIFQ-EAVEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFNRLSTLSSAIGLLPR 442

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N +  LP  ++ LS L++L +  N   ++P+ +     L  + + +N     
Sbjct: 443 LVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALPDVVRHLRALQNLMLNDNQVS-T 501

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
             P  +    ML  +D+ NN I+ +P    +L+ L  L+++ N   +P + I++ G  AV
Sbjct: 502 VDPDVLLACPMLRCVDLHNNAIQQVPPRLGLLN-LHTLKLEGNLFRMPRQTILDKGTGAV 560

Query: 376 VQYM 379
           ++Y+
Sbjct: 561 LEYL 564



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 75/277 (27%), Positives = 132/277 (47%), Gaps = 30/277 (10%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           +   + +  LNL N+    +E +PD + +    ++LD         PA  G +S      
Sbjct: 8   LKQARASGQLNLANR---QLEAVPDQVWR----INLD--------APAQAGAVS------ 46

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                  +  D   + + L  L L  NQ++ LP  L  L  L  LD   N ++ + + +G
Sbjct: 47  ------FDSEDRWWEQVGLARLILSCNQLTTLPEQLELLPDLTLLDAHDNKITVISERLG 100

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L  LK L +  N LE LP ++    +L+ L++D N L++L  A+ ++  L  L   +N 
Sbjct: 101 QLAQLKALNLGQNCLENLPQSLYHLPALQSLKLDNNALRSLAPALRQLSELRELDASHNR 160

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           + +LP ++  L  L  L +  N+LES+P        L +++I +N   L +LP  +G+L 
Sbjct: 161 LVELPESLCDLPHLARLRLGHNQLESLPAPFGQLEALQELDIVHNR--LTSLPTKLGSLS 218

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            +  LD+  N ++ LP S   +++L+ L V  N +  
Sbjct: 219 HITRLDVRYNALQRLP-SLASMTQLKELLVGYNQIHT 254



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 98/171 (57%), Gaps = 8/171 (4%)

Query: 92  TRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS-LKKLDLHANR 150
           T  LNL N+ +D++   P  I +  ++    L +N+++ +PA +  LSS L  LDL  NR
Sbjct: 374 TGALNLSNQGLDHV---PSDIFQ-EAVEQGTLQKNKLLHLPAQVDQLSSTLTHLDLGFNR 429

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  L  +IG L  LV L+L GN +++LP  L+ L  L++L LG N  ++LPD +  L +L
Sbjct: 430 LSTLSSAIGLLPRLVSLELEGNALTSLPEELALLSELQDLGLGHNRFTALPDVVRHLRAL 489

Query: 211 KKLIVETNDLEEL-PHTIGQCSSLRELRVDYNRLKALPEAVG--KIHTLEV 258
           + L++  N +  + P  +  C  LR + +  N ++ +P  +G   +HTL++
Sbjct: 490 QNLMLNDNQVSTVDPDVLLACPMLRCVDLHNNAIQQVPPRLGLLNLHTLKL 540


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 141/274 (51%), Gaps = 5/274 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L+L N+ + +I   P+ +  ++ L  LD+S N++ ++P  +G L  L +LD   N 
Sbjct: 14  GRLKLDLSNQGLTSI---PEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNT 70

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP +IG L  L +L +  N++S LP  + +L +L +L +G+N L+  P  + SL +L
Sbjct: 71  LTSLPQAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNL 130

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           + L V  N L   P  + +   LR L ++ N+L  +P  V  +  LEVLSV  N +   P
Sbjct: 131 EVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFP 190

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L  LREL +  N+L  VP  +C    L  +++ NN  +L   P  +  L+ L EL
Sbjct: 191 PGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNN--NLSTFPPGVEKLQKLREL 248

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            I  NQ+  +P    +L  +  L V  N L   P
Sbjct: 249 RIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFP 282



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 185/416 (44%), Gaps = 74/416 (17%)

Query: 80   LASLIEVSSKKGTR---DLNLQNKLMDN----------IEWLPDSIGKLSSLVSLDLSEN 126
            L ++I+V  +KG+     LNLQ + ++           +  +P+ +  ++ L  LD+S N
Sbjct: 898  LQAIIDVMKEKGSNMAAGLNLQPQTVNGRLKLDLSNQGLTSIPEEVFDITDLEVLDVSNN 957

Query: 127  RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
            ++ ++P  IG L  L +LD   N +  LP +IG L  L++L +  NQ++ +P  +  L  
Sbjct: 958  KLTSIPEAIGRLQKLYRLDADGNMLTSLPQAIGSLQKLIHLYIYDNQLTEVPSGVCSLPN 1017

Query: 187  LEELDLGSNNLSSLPDSI------GSLI--------SLKKLIVETNDLEELPHTIGQCSS 232
            LE L++ +N LS+ P  +      G+L         +L+ L V  N L   P  + +   
Sbjct: 1018 LEVLNVYNNKLSTFPPGVEKLQKLGTLYINGVCLLPNLEVLSVGNNKLSTFPPGVEKLQK 1077

Query: 233  LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
            LREL +  N+L  +P  V  +  LEVLSV  N I++LP  ++ L+ L+ L VS  +    
Sbjct: 1078 LRELYIRDNQLTEVPSGVCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEF 1137

Query: 293  PESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGNLEML---- 327
            P  +     + ++  G    D                     L+ LP ++ +L  L    
Sbjct: 1138 PRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLREVY 1197

Query: 328  -------------------EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
                               E+LDIS N I  LP +     +L+ L V  NPL  PP+++ 
Sbjct: 1198 LDDNKFGTFPEVLCELPAMEKLDISKNNITRLPTALHRADKLKHLDVSGNPLTYPPQDVC 1257

Query: 369  EMGAQAVVQYMADLVEKRDAKTQPVKQ---KKSWVEMCFFSRSNKRKRNGMDYVKA 421
            + G  A++ ++    EK +   +   +   K S  +    +RS       MD +KA
Sbjct: 1258 KQGTGAIMAFLKQEAEKDERILRVFNRLSVKASQTQWKPLARSLGLSNRAMDAIKA 1313



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/322 (28%), Positives = 147/322 (45%), Gaps = 28/322 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+   P  + KL  L  L +  N++  VP  +  L +++ L +  N +   P     L 
Sbjct: 230 NNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQ 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ++ +P  +  L  LE L +G N + SLPD +  L  LK L V    L+E
Sbjct: 290 KLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDE 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + Q  +L EL     +   +P+ VG +  L  L++  N +K LP+TMS L +LRE+
Sbjct: 350 FPRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREV 409

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+  + PE LC                          L  +E+LDIS N I  LP 
Sbjct: 410 YLDDNKFGTFPEVLC-------------------------ELPAMEKLDISKNNITRLPT 444

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQ---KKSW 399
           +     +L+ L V  NPL  PP+++ + G  A++ ++    EK +   +   +   K S 
Sbjct: 445 ALHRADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILRAFNRLSVKASQ 504

Query: 400 VEMCFFSRSNKRKRNGMDYVKA 421
            +    +RS       MD +KA
Sbjct: 505 TQWKPLARSLGLSNRAMDAIKA 526



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 134/273 (49%), Gaps = 5/273 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  +  L +L  L++S N++   P  +  L  L+ L ++ N++ E+P  +  L +L  L
Sbjct: 120 FPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N++S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N+L   P  +
Sbjct: 180 SVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGV 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   LRELR+  N+L  +P  V  +  +E LSV  NN+   P     L  LREL ++ N
Sbjct: 240 EKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  VP  +C    L  + +G N   +R+LP  +  L  L+ L + N Q+   P     L
Sbjct: 300 QLTEVPSGVCSLPNLEVLGVGKN--PIRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQL 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
             L  L       ++ P    E+G+   + Y+A
Sbjct: 358 KTLEELYAGGCKFDIVPD---EVGSLQHLWYLA 387



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 106/211 (50%), Gaps = 10/211 (4%)

Query: 101 LMDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           L+ NIEWL          P    KL  L  L +++N++  VP+ +  L +L+ L +  N 
Sbjct: 264 LLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNP 323

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           I  LPD +  L  L  L +   Q+   P  + +L  LEEL  G      +PD +GSL  L
Sbjct: 324 IRSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHL 383

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
             L ++ N L+ LP T+    +LRE+ +D N+    PE + ++  +E L +  NNI +LP
Sbjct: 384 WYLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLP 443

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATT 301
           T +     L+ LDVS N L   P+ +C   T
Sbjct: 444 TALHRADKLKHLDVSGNPLTYPPQDVCKQGT 474



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 2/112 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +    +  +P  +  ++ L  LDVS N+L S+PE++     L +++   ++  L +LP
Sbjct: 18  LDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAVGRLQKLYRLDA--DYNTLTSLP 75

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           ++IG+L+ L  L I +N++  LP     L +L  L +  N L   P  +  +
Sbjct: 76  QAIGSLQKLTHLYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSL 127


>gi|320165747|gb|EFW42646.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
          Length = 637

 Score =  135 bits (340), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 149/260 (57%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP ++ +L+SLVSL   EN++  +P+  G LS L++L L  N+I ELP+ I  L++L  L
Sbjct: 44  LPLTMERLTSLVSLSCCENQLRTLPSGFGSLSKLEELRLRDNQIAELPEEIQSLIALRVL 103

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+S LP  +  L  L+ LDL  N +  LP  +G L +L +L V  N L  LP  I
Sbjct: 104 QLNVNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGVLKNLTELWVRENLLRSLPDQI 163

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            + ++L +L V  N L  LP+ +G++  LE L +  N++ +LP + SSL SL+ LD++ N
Sbjct: 164 CELTNLVKLGVGGNTLGELPQNIGRLVNLEELWLDDNDLTELPPSFSSLKSLKLLDLTSN 223

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P      T L  + + +N  DL +LP SIGNL  +  +   NN++ VLP +F   
Sbjct: 224 HLRTLPADFGNLTALTDLWLTSN--DLTSLPASIGNLRNMHSIAAENNKLEVLPATFFSA 281

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + LR  R   N LE  P  I
Sbjct: 282 TSLREFRFSNNYLEELPAGI 301



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 158/317 (49%), Gaps = 36/317 (11%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +  LP  +  LSSL  LDLSEN+I  +P  +G L +L +L +  N +  LPD I +L
Sbjct: 107 VNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGVLKNLTELWVRENLLRSLPDQICEL 166

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEEL-----------------------DLGSNNLS 198
            +LV L + GN +  LP  + RLV LEEL                       DL SN+L 
Sbjct: 167 TNLVKLGVGGNTLGELPQNIGRLVNLEELWLDDNDLTELPPSFSSLKSLKLLDLTSNHLR 226

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +LP   G+L +L  L + +NDL  LP +IG   ++  +  + N+L+ LP       +L  
Sbjct: 227 TLPADFGNLTALTDLWLTSNDLTSLPASIGNLRNMHSIAAENNKLEVLPATFFSATSLRE 286

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
                N +++LP  + +L+ L  + +  N++  +PE L   T +  + + +N   L  LP
Sbjct: 287 FRFSNNYLEELPAGIENLTELHSIYLERNDVFELPELLGRCTKITNLFLSDNL--LVRLP 344

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            S+G+L+ L  L ++NN++  LP   + ++ L  L + +       R  V    +AVV+Y
Sbjct: 345 SSMGSLQSLSVLSLNNNRLACLPLELKHIASLSALWLSDT-----QRKPVPALHEAVVKY 399

Query: 379 MADLVEKRDAKTQPVKQ 395
                 ++  + QP KQ
Sbjct: 400 ------QQPRRKQPRKQ 410



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/228 (32%), Positives = 104/228 (45%), Gaps = 48/228 (21%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           +LE+L L +N L  LP ++  L SL  L    N L  LP   G  S L ELR+  N++  
Sbjct: 30  QLEQLILDTNKLVGLPLTMERLTSLVSLSCCENQLRTLPSGFGSLSKLEELRLRDNQIAE 89

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE----------------- 288
           LPE +  +  L VL +  N +  LP  + +LSSL+ LD+S N+                 
Sbjct: 90  LPEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVLDLSENQIHLLPTELGVLKNLTEL 149

Query: 289 ------LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL------------ 330
                 L S+P+ +C  T LVK+ +G N   L  LP++IG L  LEEL            
Sbjct: 150 WVRENLLRSLPDQICELTNLVKLGVGGN--TLGELPQNIGRLVNLEELWLDDNDLTELPP 207

Query: 331 -----------DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
                      D+++N +R LP  F  L+ L  L +  N L   P +I
Sbjct: 208 SFSSLKSLKLLDLTSNHLRTLPADFGNLTALTDLWLTSNDLTSLPASI 255



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 2/98 (2%)

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L +L +  N+L  +P ++   T+LV ++   N   LR LP   G+L  LEEL + +NQI 
Sbjct: 31  LEQLILDTNKLVGLPLTMERLTSLVSLSCCEN--QLRTLPSGFGSLSKLEELRLRDNQIA 88

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
            LP+  + L  LRVL++  N L + PR ++ + +  V+
Sbjct: 89  ELPEEIQSLIALRVLQLNVNQLSLLPRGVLALSSLQVL 126


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               +  N+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L++LR    
Sbjct: 270 ETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 152/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P +  ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSD 400



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/234 (33%), Positives = 132/234 (56%), Gaps = 2/234 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 158/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LDLS N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 13  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPLTRLPESFP 72

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 73  ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNE 132

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L  LP++IG+L +LK L ++ N L E+P  +G   +L  L V  N+L+ LPE +  + +L
Sbjct: 133 LYHLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSL 192

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N ++ LP  +  L  L  L V  N+L  + +S+    +L ++ +  N   L++
Sbjct: 193 TDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTEN--QLQS 250

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  I    +QA  
Sbjct: 251 LPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRIPSEI----SQAAE 306

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 307 LHVLDVAGNR 316



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N +  LP++IG L +L
Sbjct: 87  LQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNL 146

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ +P  +  L  L  LD+  N L  LP+ I  L SL  L+V  N L+ LP
Sbjct: 147 KDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLP 206

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD N+L  L +++G   +L  L +  N ++ LP ++  L  L  L+ 
Sbjct: 207 DGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNA 266

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L   ++ +N   L  +P  I     L  LD++ N++  LP S 
Sbjct: 267 DRNKLTSLPKEIGGCCSLNVFSVRDN--RLSRIPSEISQAAELHVLDVAGNRLMYLPLSL 324

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 325 TTL-KLKALWLSDN 337



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP+S+ +L  L  LDL  N +  +P TIG L +LK L L  N++ E+P  +G+L +L
Sbjct: 110 LTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNL 169

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L  LPD IG L  L  L V+ N L +L 
Sbjct: 170 LCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLT 229

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG C SL EL +  N+L++LP+++G++  L  L+   N +  LP  +    SL    V
Sbjct: 230 DSIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 289

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  A  L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 290 RDNRLSRIPSEISQAAELHVLDVAGN--RLMYLPLSLTTLK-LKALWLSDNQ 338



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 132/254 (51%), Gaps = 2/254 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LDL  N I E+P+SI    +L   D  GN 
Sbjct: 4   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNP 63

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L +LP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 64  LTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRL 123

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N L  LPE +G +  L+ L +  N + ++P  + +L +L  LDVS N+LE +P
Sbjct: 124 EELDLGNNELYHLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLP 183

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + +  N   L+ LP  IG L  L  L +  N++  L DS      L  L
Sbjct: 184 EEISGLTSLTDLLVSQNL--LQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTEL 241

Query: 354 RVQENPLEVPPRNI 367
            + EN L+  P++I
Sbjct: 242 VLTENQLQSLPKSI 255


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/301 (30%), Positives = 147/301 (48%), Gaps = 26/301 (8%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L+L N+ + +I   P+ +  ++ L  L +S NR+ ++P  IG L  L +LD H N 
Sbjct: 14  GLLTLDLSNQGLTSI---PEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGNM 70

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP +IG L  L +L +  N+++ LP  + +L +L  L +G N L+ +P  +  L +L
Sbjct: 71  LTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPNL 130

Query: 211 KKLIVETNDLEELP----------------HTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           + L V  N L   P                + + +   LREL ++ N+L  +P  V  + 
Sbjct: 131 EVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSLP 190

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            LEVLSV  N +   P  +  L  LREL ++ N+L  VP  +C    L  +++ NN   L
Sbjct: 191 NLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNN--KL 248

Query: 315 RALPRSIGNLEMLEELDI-----SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
              P  +  L+ L +LDI      NN++   P     L +LR LR+  N L   PR +  
Sbjct: 249 STFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCS 308

Query: 370 M 370
           +
Sbjct: 309 L 309



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 133/270 (49%), Gaps = 7/270 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDL-----SENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           + +   P  + KL  L  LD+       N++   P  +  L  L++L ++ N++ E+P  
Sbjct: 246 NKLSTFPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRG 305

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +  L +L  LD+  +++S  P  + +L +L +L +  N L+ +P  + SL +L++L V  
Sbjct: 306 VCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYN 365

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L   P  + +   LR+L +  N+L  +P  V  +  LEVLSV  N +   P  +  L 
Sbjct: 366 NKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQ 425

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            LREL +  N+L  VP  +C    L  + + NN   L   P  +  L+ L EL +  NQ+
Sbjct: 426 KLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNN--KLSTFPPGVERLQKLRELHVHGNQL 483

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             +P     L+ L VL + +NP+   P  +
Sbjct: 484 TEIPPVVCYLTNLEVLIISDNPIRHLPDGV 513



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 123/253 (48%), Gaps = 25/253 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +P  +  L +L  LD+S +++   P  +  L  L++L ++ N++ E+P  +  L 
Sbjct: 297 NQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLP 356

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N++S  P  + +L +L +L +  N L+ +P  + SL +L+ L V  N L  
Sbjct: 357 NLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLST 416

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + +   LREL +  N+L  +P  V  +  LEV+ V  N +   P  +  L  LREL
Sbjct: 417 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLREL 476

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N+L  +P  +C+ T                          LE L IS+N IR LPD
Sbjct: 477 HVHGNQLTEIPPVVCYLTN-------------------------LEVLIISDNPIRHLPD 511

Query: 343 SFRMLSRLRVLRV 355
             R L+RL+ L V
Sbjct: 512 GVRRLTRLKTLYV 524



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 77/268 (28%), Positives = 132/268 (49%), Gaps = 15/268 (5%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  + KL  L  L + +N++         L  L++L ++ N++ E+P  +  L 
Sbjct: 138 NKLSTFPPGVEKLQKLRVLGIYDNQLTE-------LQKLRELHINGNQLTEVPSGVCSLP 190

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N++S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N L  
Sbjct: 191 NLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKLST 250

Query: 223 LPHTIGQCSSLREL-----RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
            P  + +   LR+L     +   N+L   P  V K+  L  L +  N + ++P  + SL 
Sbjct: 251 FPPGVEKLQKLRQLDIYGVKCHNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLP 310

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  LDVS ++L + P  +     L +++I  N   L  +P  + +L  LEEL + NN++
Sbjct: 311 NLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGN--QLTEVPSGVCSLPNLEELSVYNNKL 368

Query: 338 RVLPDSFRMLSRLRVLRVQENPL-EVPP 364
              P     L +LR L +  N L EVPP
Sbjct: 369 STFPPGVEKLQKLRQLYIYGNQLTEVPP 396



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 141/303 (46%), Gaps = 22/303 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +   P  + KL  L  L +  N++  VP  +  L +L+ L ++ N++   P  +  L 
Sbjct: 366 NKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQ 425

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ++ +P  +  L  LE + + +N LS+ P  +  L  L++L V  N L E
Sbjct: 426 KLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTE 485

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGK--------------------IHTLEVLSVR 262
           +P  +   ++L  L +  N ++ LP+ V +                    + TLE L   
Sbjct: 486 IPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQFPGQVLQLKTLEKLHAG 545

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
                 LP  + +L  L  L +S N L ++P ++     L ++++  N  D    P  + 
Sbjct: 546 GCKFDMLPDEVGNLQHLWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFD--TFPEVLC 603

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           +L  +E+L ISNN I  LP +     +L+ L V  NPL  PP+++ E G  A++ ++   
Sbjct: 604 DLPAMEKLFISNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDVCEQGTAAIMAFLKQE 663

Query: 383 VEK 385
            EK
Sbjct: 664 AEK 666


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 157/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LDLS N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 15  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 74

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 75  ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNE 134

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L  LP++IG+L +LK L ++ N L E+P  +G   +L  L V  N+L+ LPE +  + +L
Sbjct: 135 LYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSL 194

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N ++ LP  +  L  L  L V  N+L  + +S+    +L ++ +  N   L+ 
Sbjct: 195 TDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTEN--QLQI 252

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  I    +QA  
Sbjct: 253 LPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRIPSEI----SQATE 308

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 309 LHVLDVAGNR 318



 Score =  128 bits (321), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N +  LP++IG L +L
Sbjct: 89  LQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNL 148

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ +P  +  L  L  LD+  N L  LP+ I  L SL  L+V  N L+ LP
Sbjct: 149 KDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLP 208

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD N+L  L +++G   +L  L +  N ++ LP ++  L  L  L+ 
Sbjct: 209 DGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNA 268

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L   ++ +N   L  +P  I     L  LD++ N++  LP S 
Sbjct: 269 DRNKLTSLPKEIGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPISL 326

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 327 TTL-KLKALWLSDN 339



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/232 (36%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP+S+ +L  L  LDL  N +  +P TIG L +LK L L  N++ E+P  +G+L +L
Sbjct: 112 LTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNL 171

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  ++ L  L +L +  N L  LPD IG L  L  L V+ N L +L 
Sbjct: 172 LCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLT 231

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG C SL EL +  N+L+ LP+++GK+  L  L+   N +  LP  +    SL    V
Sbjct: 232 DSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSV 291

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ
Sbjct: 292 RDNRLSRIPSEISQATELHVLDVAGN--RLTYLPISLTTLK-LKALWLSDNQ 340



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 133/254 (52%), Gaps = 2/254 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LDL  N I E+P+SI    +L   D  GN 
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNP 65

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L +LP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 66  LTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRL 125

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N L  LPE +G +  L+ L +  N + ++P  + +L +L  LDVS N+LE +P
Sbjct: 126 EELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLP 185

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + +  N   L+ LP  IG L  L  L +  N++  L DS      L  L
Sbjct: 186 EEINGLTSLTDLLVSQNL--LQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTEL 243

Query: 354 RVQENPLEVPPRNI 367
            + EN L++ P++I
Sbjct: 244 VLTENQLQILPKSI 257



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 120/218 (55%), Gaps = 4/218 (1%)

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L+ L  L L  N+I  LP  ++  ++L ELDL  N++  +P+SI    +L+      N L
Sbjct: 7   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPL 66

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
             LP +  +  +L  L V+   L+ALPE +G ++ L  L +R N +  LP +++ L  L 
Sbjct: 67  TRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLE 126

Query: 281 ELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ELD+  NEL  +PE++     L  + + GN  A++   P+ +GNL+ L  LD+S N++  
Sbjct: 127 ELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEI---PQEVGNLKNLLCLDVSENKLEC 183

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           LP+    L+ L  L V +N L+V P  I ++   ++++
Sbjct: 184 LPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILK 221



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 66/121 (54%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QNKL+     L DSIG   SL  L L+EN++  +P +IG L  L  L+   N++  LP  
Sbjct: 224 QNKLIQ----LTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPKE 279

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL    +R N++S +P  +S+   L  LD+  N L+ LP S+ +L  LK L +  
Sbjct: 280 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPISLTTL-KLKALWLSD 338

Query: 218 N 218
           N
Sbjct: 339 N 339


>gi|326512638|dbj|BAJ99674.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 1320

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 101/288 (35%), Positives = 150/288 (52%), Gaps = 28/288 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN------------------ 149
           LPD IG+L +L  LD S N I  +P  I    SL+KLD   N                  
Sbjct: 75  LPD-IGQLVNLEELDCSRNDIAEIPDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQLRQ 133

Query: 150 ------RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
                  + ELP  IG L +L  L++R N +  LP +L +L RLE LDLGSN L  LP+ 
Sbjct: 134 LILNDVSLAELPREIGSLSNLCVLEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPNH 193

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L SLK+  +++N+L ELP  IGQ   L+ L V  N+L  LP+ +G + +L  L +  
Sbjct: 194 IGHLQSLKEFWLDSNELTELPRDIGQLKHLQCLDVSENKLTYLPDEIGDLESLTNLELSA 253

Query: 264 NNIKQLPTTMSSLSS-LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           N++++LP T+  L   L  L ++ N L  + E +   + L ++ +  N   L  LP++IG
Sbjct: 254 NHVEELPKTIGQLKDRLLILKINSNSLTRLCEEIGQCSALTELILTENA--LTELPKTIG 311

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NL+ L  L+I  NQ+  LP        L +L +++N L   P  + ++
Sbjct: 312 NLKNLTNLNIDRNQLAYLPVEIAGCESLGMLSLRDNRLTHIPSELSQL 359



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 76/193 (39%), Positives = 110/193 (56%), Gaps = 1/193 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP+ IG L SL    L  N +  +P  IG L  L+ LD+  N++  LPD IGDL SL
Sbjct: 187 LEQLPNHIGHLQSLKEFWLDSNELTELPRDIGQLKHLQCLDVSENKLTYLPDEIGDLESL 246

Query: 165 VYLDLRGNQISALPVALSRLV-RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
             L+L  N +  LP  + +L  RL  L + SN+L+ L + IG   +L +LI+  N L EL
Sbjct: 247 TNLELSANHVEELPKTIGQLKDRLLILKINSNSLTRLCEEIGQCSALTELILTENALTEL 306

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P TIG   +L  L +D N+L  LP  +    +L +LS+R N +  +P+ +S L  L  LD
Sbjct: 307 PKTIGNLKNLTNLNIDRNQLAYLPVEIAGCESLGMLSLRDNRLTHIPSELSQLKHLHVLD 366

Query: 284 VSFNELESVPESL 296
           +S N L ++P +L
Sbjct: 367 LSGNRLLNLPCTL 379



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/193 (37%), Positives = 106/193 (54%), Gaps = 1/193 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LPDS+ +L+ L SLDL  N +  +P  IG L SLK+  L +N + ELP  IG L  L
Sbjct: 164 LKTLPDSLVQLTRLESLDLGSNVLEQLPNHIGHLQSLKEFWLDSNELTELPRDIGQLKHL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS-LKKLIVETNDLEEL 223
             LD+  N+++ LP  +  L  L  L+L +N++  LP +IG L   L  L + +N L  L
Sbjct: 224 QCLDVSENKLTYLPDEIGDLESLTNLELSANHVEELPKTIGQLKDRLLILKINSNSLTRL 283

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
              IGQCS+L EL +  N L  LP+ +G +  L  L++  N +  LP  ++   SL  L 
Sbjct: 284 CEEIGQCSALTELILTENALTELPKTIGNLKNLTNLNIDRNQLAYLPVEIAGCESLGMLS 343

Query: 284 VSFNELESVPESL 296
           +  N L  +P  L
Sbjct: 344 LRDNRLTHIPSEL 356



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 121/256 (47%), Gaps = 27/256 (10%)

Query: 140 SLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
           +L+++D     +  +PD +     +L  L L  NQ+  LP  + RL +L  L    N + 
Sbjct: 13  NLEQIDKRHCNLTAVPDDVLRYTRTLEELLLDANQLQDLPKGVYRLTQLRRLTFSDNEIQ 72

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN----------------- 241
            +   IG L++L++L    ND+ E+P  I  C SL++L    N                 
Sbjct: 73  RILPDIGQLVNLEELDCSRNDIAEIPDNIRHCRSLQKLDFSGNPLANNLPSGIIHLRQLR 132

Query: 242 -------RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
                   L  LP  +G +  L VL +R N +K LP ++  L+ L  LD+  N LE +P 
Sbjct: 133 QLILNDVSLAELPREIGSLSNLCVLEIRENLLKTLPDSLVQLTRLESLDLGSNVLEQLPN 192

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +    +L +  + +N  +L  LPR IG L+ L+ LD+S N++  LPD    L  L  L 
Sbjct: 193 HIGHLQSLKEFWLDSN--ELTELPRDIGQLKHLQCLDVSENKLTYLPDEIGDLESLTNLE 250

Query: 355 VQENPLEVPPRNIVEM 370
           +  N +E  P+ I ++
Sbjct: 251 LSANHVEELPKTIGQL 266



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 53/157 (33%), Positives = 76/157 (48%), Gaps = 28/157 (17%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL------------------- 138
           +NKL     +LPD IG L SL +L+LS N +  +P TIG L                   
Sbjct: 230 ENKLT----YLPDEIGDLESLTNLELSANHVEELPKTIGQLKDRLLILKINSNSLTRLCE 285

Query: 139 -----SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLG 193
                S+L +L L  N + ELP +IG+L +L  L++  NQ++ LPV ++    L  L L 
Sbjct: 286 EIGQCSALTELILTENALTELPKTIGNLKNLTNLNIDRNQLAYLPVEIAGCESLGMLSLR 345

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            N L+ +P  +  L  L  L +  N L  LP T+  C
Sbjct: 346 DNRLTHIPSELSQLKHLHVLDLSGNRLLNLPCTLLDC 382


>gi|241623176|ref|XP_002407534.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215501009|gb|EEC10503.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 1327

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 146/261 (55%), Gaps = 3/261 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ +P++I  L SL S D S N +  +PA    L SL  L L+   + +LP   G L +L
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNL 60

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + L+LR N +  LP++ + LV+LE LDLGSN+   LP  IG L SL++L +++N+L  LP
Sbjct: 61  MSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLP 120

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IGQ   L  L V  N+L +LP+ +  + +L  L +  N ++ LP  M  L  L    V
Sbjct: 121 KEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLTIFKV 180

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L S+P S+    +L ++ + +N   L  LP S+G L  L  L+   NQ+  LP   
Sbjct: 181 DQNRLGSLPASIGDCESLQELILTDNL--LTELPESVGQLVNLTNLNADCNQLSELPPQI 238

Query: 345 RMLSRLRVLRVQENPLE-VPP 364
             L+RL VL ++EN L+ +PP
Sbjct: 239 GQLARLGVLSLRENCLQKLPP 259



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++  LP   G LS+L+SL+L EN +  +P +   L  L++LDL +N   ELP  IG L S
Sbjct: 46  SLTQLPHDFGGLSNLMSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSS 105

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  N++S LP  + +L RL  LD+  N LSSLPD +  L SL  L +  N LE L
Sbjct: 106 LQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVL 165

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +G+   L   +VD NRL +LP ++G   +L+ L +  N + +LP ++  L +L  L+
Sbjct: 166 PEEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTDNLLTELPESVGQLVNLTNLN 225

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
              N+L  +P  +     L  +++  N   L+ LP   G L  L  LD+S N+++ LP
Sbjct: 226 ADCNQLSELPPQIGQLARLGVLSLRENC--LQKLPPETGTLRRLHVLDVSGNRLQHLP 281



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/191 (41%), Positives = 109/191 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++ E LP  IG+LSSL  L L  N +  +P  IG L  L  LD+  N++  LPD + DL 
Sbjct: 91  NDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDELCDLE 150

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N +  LP  + RL +L    +  N L SLP SIG   SL++LI+  N L E
Sbjct: 151 SLTDLHLSQNYLEVLPEEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTDNLLTE 210

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++GQ  +L  L  D N+L  LP  +G++  L VLS+R N +++LP    +L  L  L
Sbjct: 211 LPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLRENCLQKLPPETGTLRRLHVL 270

Query: 283 DVSFNELESVP 293
           DVS N L+ +P
Sbjct: 271 DVSGNRLQHLP 281



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/184 (36%), Positives = 104/184 (56%), Gaps = 2/184 (1%)

Query: 96  NLQNKLMDNIE--WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LQ   +D+ E   LP  IG+L  L+ LD+SEN++ ++P  +  L SL  L L  N +  
Sbjct: 105 SLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEV 164

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP+ +G L  L    +  N++ +LP ++     L+EL L  N L+ LP+S+G L++L  L
Sbjct: 165 LPEEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTDNLLTELPESVGQLVNLTNL 224

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
             + N L ELP  IGQ + L  L +  N L+ LP   G +  L VL V  N ++ LP T+
Sbjct: 225 NADCNQLSELPPQIGQLARLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRLQHLPLTV 284

Query: 274 SSLS 277
           ++L+
Sbjct: 285 TALN 288



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 66/198 (33%), Positives = 90/198 (45%), Gaps = 28/198 (14%)

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           +  +P  +  L  L+  D  SN LS LP     L SL  L +    L +LPH  G  S+L
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNL 60

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP +   +  LE L +  N+ ++LP  +  LSSL+EL +  NEL +  
Sbjct: 61  MSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELST-- 118

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                                  LP+ IG L  L  LD+S N++  LPD    L  L  L
Sbjct: 119 -----------------------LPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDL 155

Query: 354 RVQENPLEVPPRNIVEMG 371
            + +N LEV P    EMG
Sbjct: 156 HLSQNYLEVLPE---EMG 170


>gi|402591760|gb|EJW85689.1| leucine-rich repeat-containing protein 1, partial [Wuchereria
           bancrofti]
          Length = 581

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/281 (33%), Positives = 155/281 (55%), Gaps = 12/281 (4%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           +LNL+    +++  LP+ I     L  LDLS N I  +P TI  L+S+  L L+   + +
Sbjct: 87  ELNLKG---NDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMTSLGLNDISLTQ 143

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG L +L  L++R N +  +P ++S L +L  LDLG N L  LP+ IG L +L++L
Sbjct: 144 MPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENLEEL 203

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ NDLE LP +I QC SL +L V  N+L  LP+ +G +  L+ L+V  N ++ LP+++
Sbjct: 204 YVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPSSI 263

Query: 274 SS-------LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
            +       L  L  L    N +  +  ++     L ++ +  N   L  +P S+GNL+ 
Sbjct: 264 GNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENL--LTEIPSSLGNLKS 321

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L  L++  NQ++ LP +    + L VL +++N +E  P  I
Sbjct: 322 LRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEI 362



 Score =  125 bits (313), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 147/274 (53%), Gaps = 10/274 (3%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           R +++ ++   N++ +P  I + + +L  + L  N I  +   +     LK L L  N +
Sbjct: 13  RQVDMLDRRQCNLQSIPHDIDRNARTLEEMYLDCNHIKDLDKPLFRCRKLKILSLSENEV 72

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           I LP  I  L  L  L+L+GN +S LP  +   ++L+ LDL SN ++ LP +I  L S+ 
Sbjct: 73  IRLPSDIAHLTYLEELNLKGNDVSDLPEEIKNCIQLKILDLSSNPITRLPQTITQLTSMT 132

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +    L ++PH IG   +LR L V  N L+ +P ++ +++ L  L + +N +  LP 
Sbjct: 133 SLGLNDISLTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPN 192

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L EL V  N+LE++PES+    +L ++++  N   L  LP  IG+LE L++L 
Sbjct: 193 EIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSEN--KLMVLPDEIGDLEKLDDLT 250

Query: 332 ISNNQIRVLPDSF-------RMLSRLRVLRVQEN 358
           ++ N ++VLP S          L +L +L+   N
Sbjct: 251 VAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRN 284



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 134/284 (47%), Gaps = 55/284 (19%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  +P  IG L +L SL++ EN +  VP +I  L+ L++LDL  N + +LP+ IG L +L
Sbjct: 141 LTQMPHDIGHLRNLRSLEVRENLLRTVPPSISELNQLRRLDLGHNELDDLPNEIGMLENL 200

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N + ALP ++ +   LE+LD+  N L  LPD IG L  L  L V  N L+ LP
Sbjct: 201 EELYVDQNDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLP 260

Query: 225 HTIGQ------------------------------CSSLRELRVDYNRLKALPEAVGKIH 254
            +IG                               C +L E+ +  N L  +P ++G + 
Sbjct: 261 SSIGNNDIVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLK 320

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +L  L++  N +K+LP T+   +SL  L +  N +E                        
Sbjct: 321 SLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNLIEQ----------------------- 357

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
             LP  IG LE L  LD+ NN++  LP +  +L +LR L + EN
Sbjct: 358 --LPLEIGRLENLRVLDVCNNRLNYLPFTVNVLFKLRALWLSEN 399



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 10/208 (4%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R L+L +  +D+   LP+ IG L +L  L + +N + A+P +I    SL++LD+  N+++
Sbjct: 178 RRLDLGHNELDD---LPNEIGMLENLEELYVDQNDLEALPESIIQCRSLEQLDVSENKLM 234

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALP-------VALSRLVRLEELDLGSNNLSSLPDSIG 205
            LPD IGDL  L  L +  N +  LP       +   RL +L  L    N ++ L  +IG
Sbjct: 235 VLPDEIGDLEKLDDLTVAQNCLQVLPSSIGNNDIVTGRLKKLSILKADRNAITQLTPAIG 294

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
           S  +L ++ +  N L E+P ++G   SLR L +D N+LK LP  +G   +L VLS+R N 
Sbjct: 295 SCHALTEIYLTENLLTEIPSSLGNLKSLRTLNLDKNQLKELPPTIGGCTSLSVLSLRDNL 354

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVP 293
           I+QLP  +  L +LR LDV  N L  +P
Sbjct: 355 IEQLPLEIGRLENLRVLDVCNNRLNYLP 382



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/197 (37%), Positives = 112/197 (56%), Gaps = 7/197 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD-- 160
           +++E LP+SI +  SL  LD+SEN+++ +P  IG L  L  L +  N +  LP SIG+  
Sbjct: 208 NDLEALPESIIQCRSLEQLDVSENKLMVLPDEIGDLEKLDDLTVAQNCLQVLPSSIGNND 267

Query: 161 -----LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
                L  L  L    N I+ L  A+     L E+ L  N L+ +P S+G+L SL+ L +
Sbjct: 268 IVTGRLKKLSILKADRNAITQLTPAIGSCHALTEIYLTENLLTEIPSSLGNLKSLRTLNL 327

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           + N L+ELP TIG C+SL  L +  N ++ LP  +G++  L VL V  N +  LP T++ 
Sbjct: 328 DKNQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNNRLNYLPFTVNV 387

Query: 276 LSSLRELDVSFNELESV 292
           L  LR L +S N+ +++
Sbjct: 388 LFKLRALWLSENQSQAM 404



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  R LNL     + ++ LP +IG  +SL  L L +N I  +P  IG L +L+ LD+  N
Sbjct: 320 KSLRTLNLDK---NQLKELPPTIGGCTSLSVLSLRDNLIEQLPLEIGRLENLRVLDVCNN 376

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISAL 177
           R+  LP ++  L  L  L L  NQ  A+
Sbjct: 377 RLNYLPFTVNVLFKLRALWLSENQSQAM 404


>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
          Length = 418

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/297 (32%), Positives = 158/297 (53%), Gaps = 8/297 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L  L  L L  N++  +P  IG L +L+ LDL+ N++  LP  IG+L +L YL
Sbjct: 105 LPPEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYL 164

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL GN++  LP+ +  L  L  L+LG+N L  L   I  L +L+ L +  N+ E LP  I
Sbjct: 165 DLNGNELETLPLEIGELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEI 224

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+LK LP  +  +  L+ L +  N ++ LP  +  L +L+ L   +N
Sbjct: 225 VELEKLQCLYLHGNKLKLLPIEIEGLENLQELDLNGNELETLPAVIWKLKNLKTLRFGYN 284

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE++P  +     L  + +  N   L+ LP  I  LE L+ELD++ N++  LP     L
Sbjct: 285 KLETLPVEIVELEKLQFLYLHGN--KLKLLPIEIEGLENLQELDLNGNELETLPLEIGEL 342

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM----ADLVEKRDAKTQPVKQKKSWV 400
             L+ LR+  N LE  P  I E+     +Q++     +++E+ D K    K++ S +
Sbjct: 343 KNLKTLRLCYNKLETLPVEIGELSGS--LQFLDLRGNNILEEGDGKRTLGKKELSEI 397



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 133/252 (52%), Gaps = 2/252 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
             +D+    I ++ + I  L  L+KLDL  N +  LP  IG+L  L  L L GN++  LP
Sbjct: 47  TEIDIYSQGITSIDSDIKRLVKLEKLDLSVNNLETLPPEIGELKDLKMLYLNGNELGTLP 106

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             + RL +L+ L L +N L  LP  IG L +L+ L +  N LE LP  IG+  +L+ L +
Sbjct: 107 PEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKLETLPAEIGELENLQYLDL 166

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           + N L+ LP  +G++  L  L++  N +  L T +  L +L  L +S NE E +P  +  
Sbjct: 167 NGNELETLPLEIGELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEIVE 226

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  + +  N   L+ LP  I  LE L+ELD++ N++  LP     L  L+ LR   N
Sbjct: 227 LEKLQCLYLHGN--KLKLLPIEIEGLENLQELDLNGNELETLPAVIWKLKNLKTLRFGYN 284

Query: 359 PLEVPPRNIVEM 370
            LE  P  IVE+
Sbjct: 285 KLETLPVEIVEL 296


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 132 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHL 191

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE LP
Sbjct: 192 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLP 251

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 252 DGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 311

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 312 DRNKLVSLPKEIGGCCSLTVFCVRDN--RLTRIPAEVSRAAELHVLDVAGNRLSHLPLSL 369

Query: 345 RMLSRLRVLRVQEN 358
             L+ L+ L + +N
Sbjct: 370 TALN-LKALWLSDN 382



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/291 (34%), Positives = 149/291 (51%), Gaps = 26/291 (8%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 58  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 117

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 118 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 177

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 178 IYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 237

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ LP  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 238 TDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN--RLLT 295

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +
Sbjct: 296 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEV 346



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 142/268 (52%), Gaps = 2/268 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 112 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 171

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L+ L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 172 DLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 231

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 232 SGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTEN 291

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 292 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSRA 349

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           + L VL V  N L   P ++  +  +A+
Sbjct: 350 AELHVLDVAGNRLSHLPLSLTALNLKAL 377



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 43  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 102

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 103 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 162

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 163 TQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 222

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  LP  IG L+ L  L +  N++  LP++    
Sbjct: 223 RLERLPEEISGLTSLTDLVISQNL--LEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDC 280

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 281 ESLTELVLTENRLLTLPKSI 300



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL++L L AN++ ELP+    L+ L  L L  N+I  LP  ++  ++L ELD+  N++  
Sbjct: 29  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPE 88

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P+SI    +L+      N L  LP +  +  +L  L V+   L++LPE +G ++ L  L
Sbjct: 89  IPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 148

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +  LP +++ L  L ELD+  NE+ ++PES+     L  + +  N   L  LP+
Sbjct: 149 ELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGN--QLSELPQ 206

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
            IGNL+ L  LD+S N++  LP+    L+ L  L + +N LE+ P  I ++   ++++
Sbjct: 207 EIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILK 264



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 78/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 222 NRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCE 281

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 282 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTR 341

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + + + L  L V  NRL  LP
Sbjct: 342 IPAEVSRAAELHVLDVAGNRLSHLP 366


>gi|363736689|ref|XP_003641743.1| PREDICTED: leucine-rich repeat-containing protein 7 [Gallus gallus]
          Length = 1455

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/265 (35%), Positives = 141/265 (53%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP +I  L +L  LD+S+N I   P  I     L  ++   N + +LPD    LL
Sbjct: 79  NDLSSLPTTIASLVNLRELDISKNGIQDFPENIKCCKCLTIIEASVNPVSKLPDGFTQLL 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  E
Sbjct: 139 NLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERLDLGNNEFSE 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  + Q  +L+EL +D N L+ LP ++GK+  L  L +  N I+ +   +S    L +L
Sbjct: 199 LPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDL 258

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP 
Sbjct: 259 LLSSNMLQQLPDSIGLLKRLTTLKVDDN--QLTILPNAIGNLSLLEEFDCSCNELESLPS 316

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           +   L  LR L V EN L   PR I
Sbjct: 317 TIGYLHNLRTLAVDENFLPELPREI 341



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 138/254 (54%), Gaps = 2/254 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD   +L +L  L L++  +  +PA  G L  L+ L+L  N +  LP S+  L  L  L
Sbjct: 130 LPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLTQLERL 189

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+ S LP  L ++  L+EL + +N+L  LP SIG L  L  L +  N +E +   I
Sbjct: 190 DLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDI 249

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
             C  L +L +  N L+ LP+++G +  L  L V  N +  LP  + +LS L E D S N
Sbjct: 250 SGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCN 309

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ELES+P ++ +   L  + +  NF  L  LPR IG+ + +  + + +N++  LPD    +
Sbjct: 310 ELESLPSTIGYLHNLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQM 367

Query: 348 SRLRVLRVQENPLE 361
            +LRVL + +N L+
Sbjct: 368 QKLRVLNLSDNRLK 381



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G   L+ L L +N + +
Sbjct: 208 NLKELWMDNNSLQILPGSIGKLKQLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQ 267

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP A+  L  LEE D   N L SLP +IG L +L+ L
Sbjct: 268 LPDSIGLLKRLTTLKVDDNQLTILPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTL 327

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LP+ +G++  L VL++  N +K LP T 
Sbjct: 328 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPDEIGQMQKLRVLNLSDNRLKNLPFTF 387

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 388 TKLKELAALWLSDNQ 402



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 131/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +LK+L +  N +  LP SIG L 
Sbjct: 171 NHLKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGSIGKLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 231 QLVYLDMSKNRIETVDLDISGCEGLEDLLLSSNMLQQLPDSIGLLKRLTTLKVDDNQLTI 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+ IG  S L E     N L++LP  +G +H L  L+V  N + +LP  + S  ++  +
Sbjct: 291 LPNAIGNLSLLEEFDCSCNELESLPSTIGYLHNLRTLAVDENFLPELPREIGSCKNVTVM 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +P+ +     L  +N+ +N   L+ LP +   L+ L  L +S+NQ + L
Sbjct: 351 SLRSNKLEFLPDEIGQMQKLRVLNLSDN--RLKNLPFTFTKLKELAALWLSDNQSKAL 406



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/184 (30%), Positives = 95/184 (51%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +LREL +  N ++  
Sbjct: 48  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSSLPTTIASLVNLRELDISKNGIQDF 107

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N + +LP   + L +L +L ++   LE +P +      L  + 
Sbjct: 108 PENIKCCKCLTIIEASVNPVSKLPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILE 167

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  L+ L +  N L++ P +
Sbjct: 168 LRENH--LKTLPKSMHKLTQLERLDLGNNEFSELPEVLEQIQNLKELWMDNNSLQILPGS 225

Query: 367 IVEM 370
           I ++
Sbjct: 226 IGKL 229


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 155/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 14  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 73

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N+
Sbjct: 74  ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGNND 133

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 134 IYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 193

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE+L     L ++ +  N   L  
Sbjct: 194 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCENLTELVLTEN--RLLT 251

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+S+G L+ L  L+   N++  LP        L V  V+ N L   P  +    +QA  
Sbjct: 252 LPKSVGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRNNRLTWIPAEV----SQATE 307

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 308 LHVLDVAGNR 317



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 94/254 (37%), Positives = 137/254 (53%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP SIG LL L
Sbjct: 88  LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHL 147

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 148 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 207

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEA+G    L  L +  N +  LP ++  L  L  L+ 
Sbjct: 208 DGIGKLKKLSILKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSVGKLKKLSNLNA 267

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    + NN   L  +P  +     L  LD++ N++  LP S 
Sbjct: 268 DRNKLVSLPKEIGGCCSLTVFCVRNN--RLTWIPAEVSQATELHVLDVAGNRLSHLPLSL 325

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 326 TTL-KLKALWLSDN 338



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/257 (32%), Positives = 134/257 (52%), Gaps = 2/257 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   D  GN 
Sbjct: 5   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNP 64

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 65  LTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRL 124

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N +  LP+++G +  L+ L +  N + +LP  + +L +L  LDVS N LE +P
Sbjct: 125 EELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLP 184

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++      L  L
Sbjct: 185 EEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCENLTEL 242

Query: 354 RVQENPLEVPPRNIVEM 370
            + EN L   P+++ ++
Sbjct: 243 VLTENRLLTLPKSVGKL 259


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 156/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + +LP+SIG+L  LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N ++ +P  +  L  L  L V  N L  +PE++    +L ++ +  N   L  
Sbjct: 246 TDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTEN--RLLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA  
Sbjct: 304 LPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEV----SQATE 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/254 (36%), Positives = 137/254 (53%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG L  L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  LPEAVG   +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +     L    + +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCGLTVFCVRDN--RLTRIPAEVSQATELHVLDVAGNRLLHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TTL-KLKALWLSDN 390



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 141/268 (52%), Gaps = 2/268 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LPDS+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP ++  L  L++L L  N LS LP  IG+L +L  L V  N LE LP  I
Sbjct: 180 DLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ +P+ +GK+  L +L V  N + QLP  +    SL EL ++ N
Sbjct: 240 SGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 RLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEVSQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           + L VL V  N L   P ++  +  +A+
Sbjct: 358 TELHVLDVAGNRLLHLPLSLTTLKLKAL 385



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 135/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N +  LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +PE +   T+L  + I  N   L  +P  IG L+ L  L +  N++  LP++    
Sbjct: 231 RLERLPEEISGLTSLTDLVISQNL--LETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L   P++I
Sbjct: 289 ESLTELVLTENRLLTLPKSI 308



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/145 (36%), Positives = 77/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+ +LP+++GD  
Sbjct: 230 NRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N++  LP ++ +L +L  L+   N L SLP  IG    L    V  N L  
Sbjct: 290 SLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNRLTR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 350 IPAEVSQATELHVLDVAGNRLLHLP 374



 Score = 43.9 bits (102), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 30/93 (32%), Positives = 46/93 (49%), Gaps = 2/93 (2%)

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL EL +  N+L  +PE       L K+ + +N  +++ LP  I N   L ELD+S N I
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EIQRLPPEIANFMQLVELDVSRNDI 94

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             +P+S      L++     NPL   P +  E+
Sbjct: 95  PEIPESISFCKALQIADFSGNPLTRLPESFPEL 127


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/268 (35%), Positives = 143/268 (53%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I+ LP  I     LV LDLS N I  +P +I    SL+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           +L +L  L +    + ALP  +  L  L  L+L  N L+ LP+S+  L  L++L +  ND
Sbjct: 126 ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNND 185

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP TIG   +L++L +D N+L  LP+ +G +  L  L +  N +++LP  +S L+SL
Sbjct: 186 LYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSL 245

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L +S N LE +P+ +     L  + +  N   L  L  ++G+ E L EL ++ NQ+  
Sbjct: 246 TDLLISQNLLEVLPDGIGKLKKLSILKVDQN--RLVQLTEAVGDCESLTELVLTENQLLT 303

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   L +L VL V  N L   P+ I
Sbjct: 304 LPKSIGRLKKLNVLNVDRNKLVSLPKEI 331



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N +  LP++IG L +L
Sbjct: 140 LQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ LP  +  L  L  LD+  N L  LP+ I  L SL  L++  N LE LP
Sbjct: 200 KDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD NRL  L EAVG   +L  L +  N +  LP ++  L  L  L+V
Sbjct: 260 DGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNV 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L   ++ +N   L  +P  I     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLNVFSVRDN--RLSRIPPEISQATELHVLDVAGNRLLHLPMSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TSL-KLKALWLSDN 390



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/232 (37%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP+S+ +L  L  LDL  N +  +P TIG L +LK L L  N++ ELP  IG L +L
Sbjct: 163 LTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L  LPD IG L  L  L V+ N L +L 
Sbjct: 223 LCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLT 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G C SL EL +  N+L  LP+++G++  L VL+V  N +  LP  +    SL    V
Sbjct: 283 EAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+ +L+ L+ L +S+NQ
Sbjct: 343 RDNRLSRIPPEISQATELHVLDVAGN--RLLHLPMSLTSLK-LKALWLSDNQ 391



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 144/274 (52%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + A+P  IG L +L  L+L  N +  LP+S+  L  L  L
Sbjct: 120 LPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEEL 179

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N +  LP  +  L  L++L L  N L+ LP  IGSL +L  L +  N LE LP  I
Sbjct: 180 DLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEI 239

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L V  N + QL   +    SL EL ++ N
Sbjct: 240 SGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTEN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N+  N   L +LP+ IG    L    + +N++  +P      
Sbjct: 300 QLLTLPKSIGRLKKLNVLNVDRN--KLVSLPKEIGGCCSLNVFSVRDNRLSRIPPEISQA 357

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 358 TELHVLDVAGNRLLHLPMSLTSLKLKAL--WLSD 389



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 140/252 (55%), Gaps = 5/252 (1%)

Query: 128 IVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           + AVP  I   S SL++L L AN++ ELP     L+ L  L L  N+I  LP  ++  ++
Sbjct: 24  LAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQ 83

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L ELDL  N++  +P+SI    SL+      N L  LP +  +  +L  L V+   L+AL
Sbjct: 84  LVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQAL 143

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +G ++ L  L +R N +  LP +++ L  L ELD+  N+L ++PE++     L  + 
Sbjct: 144 PENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLW 203

Query: 307 I-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
           + GN  A+L   P+ IG+L+ L  LDIS N++  LP+    L+ L  L + +N LEV P 
Sbjct: 204 LDGNQLAEL---PQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPD 260

Query: 366 NIVEMGAQAVVQ 377
            I ++   ++++
Sbjct: 261 GIGKLKKLSILK 272



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/145 (38%), Positives = 79/145 (54%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+ I  L+SL  L +S+N +  +P  IG L  L  L +  NR+++L +++GD  
Sbjct: 230 NKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ RL +L  L++  N L SLP  IG   SL    V  N L  
Sbjct: 290 SLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDNRLSR 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  I Q + L  L V  NRL  LP
Sbjct: 350 IPPEISQATELHVLDVAGNRLLHLP 374


>gi|291238114|ref|XP_002738976.1| PREDICTED: PDZ-domain protein scribble-like [Saccoglossus
           kowalevskii]
          Length = 1478

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 100/288 (34%), Positives = 155/288 (53%), Gaps = 27/288 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN IE LP  +G   +L+ LD+S N I+ +P  I     L+  D   N I +LPD   
Sbjct: 67  LSDNEIEALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFT 126

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG L +L+ L+LR N +  LP +LS LV+LE+LDLGSN 
Sbjct: 127 QLRDLTHLCLNDVSLTRLPPDIGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNE 186

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L  LP+++G+L +L +L ++ N+L ELP  IG  S L  L V  NRL++LPE +G +  L
Sbjct: 187 LEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNL 246

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L +  N I++LP  + +L  +  L +  N L ++  ++     L ++ +  N   L+ 
Sbjct: 247 TDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENL--LQE 304

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           LP +IG L+ L  L++  N+++ +P       +L VL ++EN L E+P
Sbjct: 305 LPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIP 352



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 136/234 (58%), Gaps = 2/234 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG LS+L++L+L EN +  +P ++  L  L++LDL +N + ELP+++G L +L+ L
Sbjct: 144 LPPDIGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMEL 203

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+++ LP  +  L +L  LD+  N L SLP+ IG L +L  L +  N +E LP  I
Sbjct: 204 WLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLGNLTDLHLSQNCIERLPEGI 263

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    +  L++D NRL AL  A+G    L+ L +  N +++LP T+  L  L  L+V  N
Sbjct: 264 GNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATIGLLKKLNNLNVDRN 323

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            L+SVP  L     L  +++  N   L  +P  IG+L+ L  LD+S N+I  LP
Sbjct: 324 RLKSVPIELGRCHKLGVLSLRENM--LTEIPSEIGSLKELHVLDLSGNRIEYLP 375



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 114/191 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+++G L +L+ L L  N +  +PA IG LS L  LD+  NR+  LP+ IG L 
Sbjct: 185 NELEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLPEEIGGLG 244

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N I  LP  +  L ++  L +  N L +L  +IGS   L++LI+  N L+E
Sbjct: 245 NLTDLHLSQNCIERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQE 304

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TIG    L  L VD NRLK++P  +G+ H L VLS+R N + ++P+ + SL  L  L
Sbjct: 305 LPATIGLLKKLNNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVL 364

Query: 283 DVSFNELESVP 293
           D+S N +E +P
Sbjct: 365 DLSGNRIEYLP 375



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 141/281 (50%), Gaps = 28/281 (9%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L ++  L LS+N I A+P  +G   +L +LD+  N I+E+P++I     L   D  GN 
Sbjct: 58  RLLNIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIMEIPENIKFCKKLQVCDFSGNP 117

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           IS LP   ++L  L  L L   +L+ LP  IGSL +L  L +  N L+ LP ++     L
Sbjct: 118 ISKLPDGFTQLRDLTHLCLNDVSLTRLPPDIGSLSNLITLELRENLLKFLPTSLSFLVKL 177

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            +L +  N L+ LPE +G +  L  L +  N + +LP  + +LS L  LDVS N LES+P
Sbjct: 178 EQLDLGSNELEELPETLGALPNLMELWLDCNELTELPAEIGNLSKLMCLDVSENRLESLP 237

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNL-----------------------EMLEEL 330
           E +     L  +++  N   +  LP  IGNL                       E L+EL
Sbjct: 238 EEIGGLGNLTDLHLSQNC--IERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQEL 295

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
            ++ N ++ LP +  +L +L  L V  N L+  P   +E+G
Sbjct: 296 ILTENLLQELPATIGLLKKLNNLNVDRNRLKSVP---IELG 333



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 133/258 (51%), Gaps = 3/258 (1%)

Query: 104 NIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           N+  +PD + + + SL  L L  N++  +      L +++KL L  N I  LP  +G+ +
Sbjct: 24  NLTMIPDDVYRYARSLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFM 83

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L+ LD+  N I  +P  +    +L+  D   N +S LPD    L  L  L +    L  
Sbjct: 84  NLIELDISRNDIMEIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTR 143

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG  S+L  L +  N LK LP ++  +  LE L +  N +++LP T+ +L +L EL
Sbjct: 144 LPPDIGSLSNLITLELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  NEL  +P  +   + L+ +++  N   L +LP  IG L  L +L +S N I  LP+
Sbjct: 204 WLDCNELTELPAEIGNLSKLMCLDVSENR--LESLPEEIGGLGNLTDLHLSQNCIERLPE 261

Query: 343 SFRMLSRLRVLRVQENPL 360
               L ++ +L++ +N L
Sbjct: 262 GIGNLKQMTILKIDQNRL 279



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 120/228 (52%), Gaps = 2/228 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           SL++L L AN++ EL      LL++  L L  N+I ALP  +   + L ELD+  N++  
Sbjct: 38  SLEELYLDANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIME 97

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P++I     L+      N + +LP    Q   L  L ++   L  LP  +G +  L  L
Sbjct: 98  IPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRLPPDIGSLSNLITL 157

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +K LPT++S L  L +LD+  NELE +PE+L     L+++ +  N  +L  LP 
Sbjct: 158 ELRENLLKFLPTSLSFLVKLEQLDLGSNELEELPETLGALPNLMELWLDCN--ELTELPA 215

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            IGNL  L  LD+S N++  LP+    L  L  L + +N +E  P  I
Sbjct: 216 EIGNLSKLMCLDVSENRLESLPEEIGGLGNLTDLHLSQNCIERLPEGI 263



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/210 (32%), Positives = 111/210 (52%), Gaps = 4/210 (1%)

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           L  +YLD   NQ+  L     RL+ + +L L  N + +LP  +G+ ++L +L +  ND+ 
Sbjct: 39  LEELYLD--ANQLRELNRPFFRLLNIRKLGLSDNEIEALPPEVGNFMNLIELDISRNDIM 96

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           E+P  I  C  L+      N +  LP+   ++  L  L +   ++ +LP  + SLS+L  
Sbjct: 97  EIPENIKFCKKLQVCDFSGNPISKLPDGFTQLRDLTHLCLNDVSLTRLPPDIGSLSNLIT 156

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L++  N L+ +P SL F   L ++++G+N  +L  LP ++G L  L EL +  N++  LP
Sbjct: 157 LELRENLLKFLPTSLSFLVKLEQLDLGSN--ELEELPETLGALPNLMELWLDCNELTELP 214

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
                LS+L  L V EN LE  P  I  +G
Sbjct: 215 AEIGNLSKLMCLDVSENRLESLPEEIGGLG 244



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 50/127 (39%), Positives = 73/127 (57%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           IE LP+ IG L  +  L + +NR+VA+ A IG    L++L L  N + ELP +IG L  L
Sbjct: 256 IERLPEGIGNLKQMTILKIDQNRLVALTAAIGSCECLQELILTENLLQELPATIGLLKKL 315

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L++  N++ ++P+ L R  +L  L L  N L+ +P  IGSL  L  L +  N +E LP
Sbjct: 316 NNLNVDRNRLKSVPIELGRCHKLGVLSLRENMLTEIPSEIGSLKELHVLDLSGNRIEYLP 375

Query: 225 HTIGQCS 231
             I QC+
Sbjct: 376 LRIAQCN 382


>gi|124004117|ref|ZP_01688964.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990696|gb|EAY30176.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 535

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/255 (35%), Positives = 136/255 (53%), Gaps = 2/255 (0%)

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
           +++  L + E  + ++P     L +L++L L  N    LP  +  L +L YL+L GN  +
Sbjct: 251 NTVTQLYIEEKGLKSLPPEFVQLQALEELSLWNNHFASLPPELSKLKALKYLNLEGNLFA 310

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +  L  LE L+L  N L+SL   IG L SL  LI+E+N L  LP  +GQ  +L E
Sbjct: 311 GLPPEIVELQGLELLNLADNRLTSLSPEIGKLQSLVALILESNGLSSLPPELGQLQNLFE 370

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +D NRL +LP  +G++  L +LS+  N +  LP  +  L +L  L +S N+L+ +P  
Sbjct: 371 LYLDANRLTSLPPELGQLQNLALLSIMDNKLSDLPAELGQLQALTNLALSNNQLQHLPPE 430

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L     L +  IG+N   L +LP  +G L  L    + NNQ+  LP     L  LRVL V
Sbjct: 431 LGQLQALEEFIIGDNL--LASLPPELGQLHSLTRFYVENNQLTSLPLELGQLPLLRVLDV 488

Query: 356 QENPLEVPPRNIVEM 370
           + N L   P+ + ++
Sbjct: 489 KNNQLTSLPQELGQL 503



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 138/266 (51%), Gaps = 4/266 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L +L  L L  N   ++P  +  L +LK L+L  N    LP  I +L  L  L
Sbjct: 266 LPPEFVQLQALEELSLWNNHFASLPPELSKLKALKYLNLEGNLFAGLPPEIVELQGLELL 325

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N++++L   + +L  L  L L SN LSSLP  +G L +L +L ++ N L  LP  +
Sbjct: 326 NLADNRLTSLSPEIGKLQSLVALILESNGLSSLPPELGQLQNLFELYLDANRLTSLPPEL 385

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +  N+L  LP  +G++  L  L++  N ++ LP  +  L +L E  +  N
Sbjct: 386 GQLQNLALLSIMDNKLSDLPAELGQLQALTNLALSNNQLQHLPPELGQLQALEEFIIGDN 445

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L S+P  L    +L +  + NN   L +LP  +G L +L  LD+ NNQ+  LP     L
Sbjct: 446 LLASLPPELGQLHSLTRFYVENN--QLTSLPLELGQLPLLRVLDVKNNQLTSLPQELGQL 503

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQ 373
             L+ L +Q NPL  PP  +  + A+
Sbjct: 504 QNLQNLYLQGNPL--PPSEVEALRAK 527



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 126/241 (52%), Gaps = 6/241 (2%)

Query: 73  EKLSLI--KLASLI-EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV 129
           E+LSL     ASL  E+S  K  + LNL+  L      LP  I +L  L  L+L++NR+ 
Sbjct: 277 EELSLWNNHFASLPPELSKLKALKYLNLEGNLFAG---LPPEIVELQGLELLNLADNRLT 333

Query: 130 AVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEE 189
           ++   IG L SL  L L +N +  LP  +G L +L  L L  N++++LP  L +L  L  
Sbjct: 334 SLSPEIGKLQSLVALILESNGLSSLPPELGQLQNLFELYLDANRLTSLPPELGQLQNLAL 393

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           L +  N LS LP  +G L +L  L +  N L+ LP  +GQ  +L E  +  N L +LP  
Sbjct: 394 LSIMDNKLSDLPAELGQLQALTNLALSNNQLQHLPPELGQLQALEEFIIGDNLLASLPPE 453

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           +G++H+L    V  N +  LP  +  L  LR LDV  N+L S+P+ L     L  + +  
Sbjct: 454 LGQLHSLTRFYVENNQLTSLPLELGQLPLLRVLDVKNNQLTSLPQELGQLQNLQNLYLQG 513

Query: 310 N 310
           N
Sbjct: 514 N 514



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 112/205 (54%), Gaps = 3/205 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +G   LNL +  + +   L   IGKL SLV+L L  N + ++P  +G L +L +L
Sbjct: 315 EIVELQGLELLNLADNRLTS---LSPEIGKLQSLVALILESNGLSSLPPELGQLQNLFEL 371

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L ANR+  LP  +G L +L  L +  N++S LP  L +L  L  L L +N L  LP  +
Sbjct: 372 YLDANRLTSLPPELGQLQNLALLSIMDNKLSDLPAELGQLQALTNLALSNNQLQHLPPEL 431

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++ I+  N L  LP  +GQ  SL    V+ N+L +LP  +G++  L VL V+ N
Sbjct: 432 GQLQALEEFIIGDNLLASLPPELGQLHSLTRFYVENNQLTSLPLELGQLPLLRVLDVKNN 491

Query: 265 NIKQLPTTMSSLSSLRELDVSFNEL 289
            +  LP  +  L +L+ L +  N L
Sbjct: 492 QLTSLPQELGQLQNLQNLYLQGNPL 516



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 73/164 (44%), Gaps = 21/164 (12%)

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
           C+++ +L ++   LK+LP    ++  LE LS+  N+   LP  +S L +L+ L++  N  
Sbjct: 250 CNTVTQLYIEEKGLKSLPPEFVQLQALEELSLWNNHFASLPPELSKLKALKYLNLEGNLF 309

Query: 290 ESVPESLCFATTLVKMNIGNN---------------------FADLRALPRSIGNLEMLE 328
             +P  +     L  +N+ +N                        L +LP  +G L+ L 
Sbjct: 310 AGLPPEIVELQGLELLNLADNRLTSLSPEIGKLQSLVALILESNGLSSLPPELGQLQNLF 369

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           EL +  N++  LP     L  L +L + +N L   P  + ++ A
Sbjct: 370 ELYLDANRLTSLPPELGQLQNLALLSIMDNKLSDLPAELGQLQA 413


>gi|4914412|emb|CAB43663.1| putative protein [Arabidopsis thaliana]
 gi|7269887|emb|CAB79746.1| putative protein [Arabidopsis thaliana]
          Length = 404

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 106/306 (34%), Positives = 151/306 (49%), Gaps = 33/306 (10%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSS 199
           L+ ++L    +  LP+   +L ++  LDL  N I  +P +L+ RL+ L  LD+ SN + +
Sbjct: 55  LEVVNLSGMALQSLPNPSLNLANICKLDLSNNHIKKIPESLTARLLNLIALDIHSNQIKA 114

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCS---------------------------- 231
           LP+SIG L  LK L V  N L  LP TI  C                             
Sbjct: 115 LPNSIGCLSKLKILNVSGNFLVSLPQTIQNCRFHTSTKSGPNQSYMMIMLINSSVFFCFG 174

Query: 232 ---SLRELRVDYNRLKALPEAVG-KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              SL EL  ++N L  LP+ +G ++  L+ L V  N +  LP T++ L+SLR LD   N
Sbjct: 175 FSRSLEELNANFNELIRLPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLN 234

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +PE L     L  +N+  NF  L ALP SIG L  L ELDIS N+I VLP+S   +
Sbjct: 235 CLMILPEDLENLINLEILNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCM 294

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSR 407
            RLR L  + NPL  PP  +VE    AV +Y++  +  +   T   K+   + ++  +  
Sbjct: 295 RRLRKLSAEGNPLVSPPIEVVEQSLHAVREYLSQKMNGKLVNTAAKKKTWGFRKLVKYGT 354

Query: 408 SNKRKR 413
            N R R
Sbjct: 355 FNGRSR 360



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/136 (36%), Positives = 85/136 (62%), Gaps = 3/136 (2%)

Query: 92  TRDLNLQNKLMDNIEWLPDSIG-KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           +R L   N   + +  LPD+IG +L++L  L ++ N+++++PATI  L+SL+ LD   N 
Sbjct: 176 SRSLEELNANFNELIRLPDNIGLELTNLKKLCVNSNKLISLPATITCLTSLRVLDARLNC 235

Query: 151 IIELPDSIGDLLSLVYLDLRGN--QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           ++ LP+ + +L++L  L++  N   +SALP ++  L+ L ELD+  N ++ LP+SIG + 
Sbjct: 236 LMILPEDLENLINLEILNVSQNFQYLSALPSSIGLLLNLLELDISYNKITVLPESIGCMR 295

Query: 209 SLKKLIVETNDLEELP 224
            L+KL  E N L   P
Sbjct: 296 RLRKLSAEGNPLVSPP 311


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 143/275 (52%), Gaps = 5/275 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I ++   +G+L  L  LDLS N +  +P  IG L +L+ L L+ NR+  LP  + +L +L
Sbjct: 56  IRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNL 115

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +LDLR N+  + P  + +L  LE L L  N     P  I  L  L++L +  N L+ LP
Sbjct: 116 QHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLP 175

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG    L+ L + YN  ++ P  + K+  L+ L +  N ++ LP  +  L SL++L++
Sbjct: 176 DEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNL 235

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N  E  P  +     L  +N+ NN   L  LP +IG LE L+EL +  N+  + P+  
Sbjct: 236 LKNRFEIFPNVVGELENLKILNLSNN--KLETLPDTIGELENLQELYLLKNRFEIFPNVV 293

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L  L++L +  N L++ P    E+G    +Q++
Sbjct: 294 GELENLKILNLSNNKLKILPS---EIGKLENLQHL 325



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 148/269 (55%), Gaps = 2/269 (0%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +N+E LP  IG+L +L  L L  NR+  +P+ +  L +L+ LDL  N     P  I  L
Sbjct: 76  FNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNLQHLDLRYNEFESFPTVIRKL 135

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L GN+    P+ ++ L +L+ L+L  N L  LPD IG +  L+ L +  N+ E
Sbjct: 136 KNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGYNEFE 195

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
             P  I +  +L+ L +  N+L+ LP  + K+ +L+ L++  N  +  P  +  L +L+ 
Sbjct: 196 SFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKI 255

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L++S N+LE++P+++     L ++ +  N  ++   P  +G LE L+ L++SNN++++LP
Sbjct: 256 LNLSNNKLETLPDTIGELENLQELYLLKNRFEI--FPNVVGELENLKILNLSNNKLKILP 313

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                L  L+ L +  N LE  P  I E+
Sbjct: 314 SEIGKLENLQHLLLINNKLETLPAAIGEL 342



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/288 (32%), Positives = 151/288 (52%), Gaps = 13/288 (4%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV   K  + L+L+    +  E  P  I KL +L  L L+ N+    P  I  L  L++L
Sbjct: 108 EVEELKNLQHLDLR---YNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRL 164

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +LH N++  LPD IG +  L  L L  N+  + P  + +L  L+ L LG N L +LP  I
Sbjct: 165 ELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEI 224

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L SL+KL +  N  E  P+ +G+  +L+ L +  N+L+ LP+ +G++  L+ L +  N
Sbjct: 225 VKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKN 284

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             +  P  +  L +L+ L++S N+L+ +P  +     L  + + NN   L  LP +IG L
Sbjct: 285 RFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINN--KLETLPAAIGEL 342

Query: 325 EMLEELDISNNQIRVLPDSFRMLS-RLRVLRVQENPLEVPPRNIVEMG 371
           + L EL++  N++  LP     L+  LR+L ++ N       NI E+G
Sbjct: 343 QNLRELNLGGNKLETLPIEIEKLAGSLRLLNLRGN-------NISEVG 383



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 131/242 (54%), Gaps = 3/242 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I +L  L  L+L +N++  +P  IGG+  L+ L L  N     P  I  L +L +L
Sbjct: 151 FPIEIAELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHL 210

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L GN++  LPV + +L  L++L+L  N     P+ +G L +LK L +  N LE LP TI
Sbjct: 211 FLGGNKLETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTI 270

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+EL +  NR +  P  VG++  L++L++  N +K LP+ +  L +L+ L +  N
Sbjct: 271 GELENLQELYLLKNRFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINN 330

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE-MLEELDISNNQIRVLPDSFRM 346
           +LE++P ++     L ++N+G N   L  LP  I  L   L  L++  N I  + D  R 
Sbjct: 331 KLETLPAAIGELQNLRELNLGGN--KLETLPIEIEKLAGSLRLLNLRGNNISEVGDGERT 388

Query: 347 LS 348
           + 
Sbjct: 389 VG 390



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 2/186 (1%)

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
           V + E+ +    +  +   +G L+ L+KL +  N+LE LP  IG+  +L+ L +  NRL+
Sbjct: 44  VDVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLR 103

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP  V ++  L+ L +RYN  +  PT +  L +L  L ++ N+    P  +     L +
Sbjct: 104 TLPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQR 163

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           + + +N   L+ LP  IG ++ L+ L +  N+    P     L  L+ L +  N LE  P
Sbjct: 164 LELHDN--KLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLP 221

Query: 365 RNIVEM 370
             IV++
Sbjct: 222 VEIVKL 227


>gi|113677869|ref|NP_001038251.1| leucine-rich repeat protein SHOC-2 [Danio rerio]
 gi|123888175|sp|Q1L8Y7.1|SHOC2_DANRE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|94732359|emb|CAK04058.1| novel protein similar to vertebrate soc-2 suppressor of clear
           homolog (C. elegans) (SHOC2) [Danio rerio]
 gi|161611878|gb|AAI55580.1| Si:ch211-197i12.3 [Danio rerio]
          Length = 561

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 92/273 (33%), Positives = 161/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 204 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLA 263

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           S+  L LR N++SA+P +L++   LEEL+L +NN+S LP+ +  SL++L  L +  N  +
Sbjct: 264 SINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQ 323

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 324 SYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 381

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +C   +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 382 SMVELNLATNQLTKIPEDICGLVSLEMLTLSNNL--LKKLPYGIGNLRKLRELDLEENKL 439

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 440 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 472



 Score =  122 bits (306), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 157/327 (48%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI---- 158
           + +E LP  IG  + + +LDL  N ++ +P TIG L+S+ +L L  NR+  +P S+    
Sbjct: 227 NQLEHLPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCR 286

Query: 159 -----------------GDLLSLV---------------------------YLDLRGNQI 174
                            G L SLV                            L++  N+I
Sbjct: 287 ELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRI 346

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  I    SL
Sbjct: 347 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSL 406

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 407 EMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 466

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L+ LP  IG LE LE+L +++N  +  LP    + S+L +
Sbjct: 467 RGIGHLTNLTYLGLGENL--LQHLPEEIGTLENLEDLYLNDNPNLHSLPFELALCSKLSI 524

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 525 MSIENCPLSHLPPQIVAGGPSFIIQFL 551



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 93/336 (27%), Positives = 147/336 (43%), Gaps = 70/336 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G LS LV+L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  + 
Sbjct: 112 NKLQSLPPEVGCLSGLVTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPAVVYRVS 171

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 172 SLTTLYLRFNRITTVEKDIKNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 231

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--------- 273
           LP  IG C+ +  L + +N L  LPE +G + ++  L +RYN +  +P ++         
Sbjct: 232 LPKEIGNCTQITNLDLQHNDLLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEEL 291

Query: 274 ---------------------------------------SSLSSLRELDVSFNELESVPE 294
                                                  S  S++  L++  N +  +P 
Sbjct: 292 NLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNRINKIPF 351

Query: 295 SL-CFATTLVKMNIGNN--------FA-------------DLRALPRSIGNLEMLEELDI 332
            +   A  L K+N+ +N        F               L  +P  I  L  LE L +
Sbjct: 352 GIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDICGLVSLEMLTL 411

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           SNN ++ LP     L +LR L ++EN LE  P  I 
Sbjct: 412 SNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIA 447



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 109/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 339 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 396

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ I  L+SL  L L  N +  LP  +  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 397 PEDICGLVSLEMLTLSNNLLKKLPYGIGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 456

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L+ LPE +G +  LE L +  N N+  LP  +
Sbjct: 457 LTNNQLTTLPRGIGHLTNLTYLGLGENLLQHLPEEIGTLENLEDLYLNDNPNLHSLPFEL 516

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 517 ALCSKLSIMSIENCPLSHLP 536



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +   + LV + +  N   L +LP S+ NL+
Sbjct: 91  IHLLPSSIKELTQLTELYLYSNKLQSLPPEVGCLSGLVTLALSEN--SLTSLPDSLDNLK 148

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     +S L  L ++ N +    ++I
Sbjct: 149 KLRMLDLRHNKLREIPAVVYRVSSLTTLYLRFNRITTVEKDI 190


>gi|260815367|ref|XP_002602445.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
 gi|229287754|gb|EEN58457.1| hypothetical protein BRAFLDRAFT_198676 [Branchiostoma floridae]
          Length = 1065

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/286 (33%), Positives = 157/286 (54%), Gaps = 15/286 (5%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           ++  LP  IG LS+L++L+L EN +  +P ++  L  L++LDL AN + +LP+++G L +
Sbjct: 92  SLHKLPGDIGSLSNLITLELRENLLKVLPTSLSFLVKLEQLDLGANELEDLPETLGALPN 151

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L GN+I  LP  +  L +L  LD+  N L  LPD IG L+SL  L +  N LE L
Sbjct: 152 LKELWLDGNEIKELPPEIGHLKKLSCLDVSENKLEFLPDEIGGLVSLTDLHLSQNCLEAL 211

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P TIG+   L  L+VD NR+  L   +G    +  L +  N ++++P T+ +L  +   +
Sbjct: 212 PDTIGKLKQLAMLKVDQNRILVLTPDIGSCERIRELILTENLLQEIPPTIGNLKEMINFN 271

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N L +VP+ +     L  +++ +N   L  LP  +GNL+ L  +D++ N++  LP S
Sbjct: 272 VDRNRLLNVPDEIGGCVKLGVLSLRDNR--LTRLPNELGNLKELHVMDVAGNRLENLPFS 329

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAK 389
              L+ L+ + + EN             +Q +V++ A+  EK   K
Sbjct: 330 ITALN-LKAVWLSENQ------------SQPMVKFQAEDDEKTGDK 362



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 157/312 (50%), Gaps = 31/312 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++I    SL  +D S N I  +P     L  L+ + L+   + +LP  IG L +L+ L
Sbjct: 50  IPENIKFCKSLSVVDFSGNPIAKLPDGFTQLRGLRYVALNDISLHKLPGDIGSLSNLITL 109

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR N +  LP +LS LV+LE+LDLG+N L  LP+++G+L +LK+L ++ N+++ELP  I
Sbjct: 110 ELRENLLKVLPTSLSFLVKLEQLDLGANELEDLPETLGALPNLKELWLDGNEIKELPPEI 169

Query: 228 GQCS-----------------------SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G                          SL +L +  N L+ALP+ +GK+  L +L V  N
Sbjct: 170 GHLKKLSCLDVSENKLEFLPDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQLAMLKVDQN 229

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            I  L   + S   +REL ++ N L+ +P ++     ++  N+  N   L  +P  IG  
Sbjct: 230 RILVLTPDIGSCERIRELILTENLLQEIPPTIGNLKEMINFNVDRNR--LLNVPDEIGGC 287

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV------VQY 378
             L  L + +N++  LP+    L  L V+ V  N LE  P +I  +  +AV       Q 
Sbjct: 288 VKLGVLSLRDNRLTRLPNELGNLKELHVMDVAGNRLENLPFSITALNLKAVWLSENQSQP 347

Query: 379 MADLVEKRDAKT 390
           M     + D KT
Sbjct: 348 MVKFQAEDDEKT 359



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 141/267 (52%), Gaps = 5/267 (1%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           + P    +L +L  L +S+N ++ +P  I    SL +LD   N + ++P++I    SL  
Sbjct: 3   FSPQPFFRLMNLRKLSISDNELLRLPGEISNFMSLMELDCSRNDLPDIPENIKFCKSLSV 62

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           +D  GN I+ LP   ++L  L  + L   +L  LP  IGSL +L  L +  N L+ LP +
Sbjct: 63  VDFSGNPIAKLPDGFTQLRGLRYVALNDISLHKLPGDIGSLSNLITLELRENLLKVLPTS 122

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +     L +L +  N L+ LPE +G +  L+ L +  N IK+LP  +  L  L  LDVS 
Sbjct: 123 LSFLVKLEQLDLGANELEDLPETLGALPNLKELWLDGNEIKELPPEIGHLKKLSCLDVSE 182

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+LE +P+ +    +L  +++  N   L ALP +IG L+ L  L +  N+I VL      
Sbjct: 183 NKLEFLPDEIGGLVSLTDLHLSQNC--LEALPDTIGKLKQLAMLKVDQNRILVLTPDIGS 240

Query: 347 LSRLRVLRVQENPL-EVPPR--NIVEM 370
             R+R L + EN L E+PP   N+ EM
Sbjct: 241 CERIRELILTENLLQEIPPTIGNLKEM 267



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 73/195 (37%), Positives = 110/195 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP+++G L +L  L L  N I  +P  IG L  L  LD+  N++  LPD IG L+
Sbjct: 137 NELEDLPETLGALPNLKELWLDGNEIKELPPEIGHLKKLSCLDVSENKLEFLPDEIGGLV 196

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  N + ALP  + +L +L  L +  N +  L   IGS   +++LI+  N L+E
Sbjct: 197 SLTDLHLSQNCLEALPDTIGKLKQLAMLKVDQNRILVLTPDIGSCERIRELILTENLLQE 256

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P TIG    +    VD NRL  +P+ +G    L VLS+R N + +LP  + +L  L  +
Sbjct: 257 IPPTIGNLKEMINFNVDRNRLLNVPDEIGGCVKLGVLSLRDNRLTRLPNELGNLKELHVM 316

Query: 283 DVSFNELESVPESLC 297
           DV+ N LE++P S+ 
Sbjct: 317 DVAGNRLENLPFSIT 331



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 116/217 (53%), Gaps = 2/217 (0%)

Query: 161 LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDL 220
           L++L  L +  N++  LP  +S  + L ELD   N+L  +P++I    SL  +    N +
Sbjct: 11  LMNLRKLSISDNELLRLPGEISNFMSLMELDCSRNDLPDIPENIKFCKSLSVVDFSGNPI 70

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            +LP    Q   LR + ++   L  LP  +G +  L  L +R N +K LPT++S L  L 
Sbjct: 71  AKLPDGFTQLRGLRYVALNDISLHKLPGDIGSLSNLITLELRENLLKVLPTSLSFLVKLE 130

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +LD+  NELE +PE+L     L ++ +  N  +++ LP  IG+L+ L  LD+S N++  L
Sbjct: 131 QLDLGANELEDLPETLGALPNLKELWLDGN--EIKELPPEIGHLKKLSCLDVSENKLEFL 188

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           PD    L  L  L + +N LE  P  I ++   A+++
Sbjct: 189 PDEIGGLVSLTDLHLSQNCLEALPDTIGKLKQLAMLK 225


>gi|32425389|gb|AAH03407.2| LRRC40 protein, partial [Homo sapiens]
          Length = 581

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 176/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 71  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 130

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 131 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 190

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 191 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 249

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L  LE LD+SNN I  LP
Sbjct: 250 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLRSLERLDLSNNDISSLP 307

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 308 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 365

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 366 LPSESRVN 373



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 48/320 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L  L +L L
Sbjct: 262 EHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL-HLKFLAL 320

Query: 170 RGNQI--------------------------------SALPVALS----------RLVRL 187
            GN +                                SA   A++           ++ L
Sbjct: 321 EGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITL 380

Query: 188 EELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RELRVDYNRL 243
           + LD      + +PD +   +    +  +    N L E+P  + +   +  ++ + +N+L
Sbjct: 381 KILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKL 440

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE L    TL 
Sbjct: 441 SFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIFTLE 500

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            + I NN       P+ +  +E L  LD+ NN +  +P        LR L +  NP  VP
Sbjct: 501 TILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVP 559

Query: 364 PRNIVEMGAQAVVQYMADLV 383
              I+  G  A+++Y+ D +
Sbjct: 560 RAAILMKGTAAILEYLRDRI 579



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 31/186 (16%)

Query: 108 LPDSIG---KLSSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLS 163
           +PD +    K + + S++ S+N++  +P  +  L  +   +DL  N++  +   +  L  
Sbjct: 393 IPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQK 452

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV-------- 215
           L +LDLR N +++LP  +  LVRL+ ++L  N    LP+ +  + +L+ +++        
Sbjct: 453 LTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIFTLETILISNNQVGSV 512

Query: 216 ----------------ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTL 256
                           + NDL ++P  +G C +LR L +D N  +    A+   G    L
Sbjct: 513 DPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAIL 572

Query: 257 EVLSVR 262
           E L  R
Sbjct: 573 EYLRDR 578


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 143/272 (52%), Gaps = 7/272 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L  L  L+L  N+  A+P  IG L +L+ L L +NR+  LP  IG L +L  L
Sbjct: 53  LPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRL 112

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N ++ LP  +  L  L+ LDL  N L SLP  IG L +LK+L +  N L  LP  I
Sbjct: 113 SLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEI 172

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +G +  LE L++  + +   P  + +L +L+ L +S N
Sbjct: 173 WQLENLQTLSISGNQLTILPKEIGTLQKLEDLNL--SGLAVFPQEIGTLQNLKGLYLSNN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L + P+ +     L ++ + +    L   P+ IG L+ LEEL + + Q+  L      L
Sbjct: 231 RLTTFPQEIGTLQNLKELYLSS--TQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQL 288

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L++L + +N     P+   E+G    ++Y+
Sbjct: 289 QNLKLLDLSDNQFTTFPK---EIGKLRKLEYL 317



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 143/289 (49%), Gaps = 27/289 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP  IG L +L +LDL  NR+ ++P  IG L +LK+L L  N +  LP  I  L 
Sbjct: 117 NHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLE 176

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L + GNQ++ LP  +  L +LE+L+L    L+  P  IG+L +LK L +  N L  
Sbjct: 177 NLQTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTT 234

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  IG   +L+EL +   +L   P+ +G++  LE L +    +  L   +  L +L+ L
Sbjct: 235 FPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLL 294

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI----- 337
           D+S N+  + P+ +     L  + + +N   L  LP+ IG L+ L+ L++ NN++     
Sbjct: 295 DLSDNQFTTFPKEIGKLRKLEYLFLEHN--RLTTLPKEIGTLQRLKLLNLYNNRLTTLSE 352

Query: 338 ------------------RVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
                              VLP     L  L+ L +  NP    P+ IV
Sbjct: 353 EIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFPQEIV 401



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/252 (32%), Positives = 120/252 (47%), Gaps = 27/252 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L  L  L+LS   +   P  IG L +LK L L  NR+   P  IG L +L  L
Sbjct: 191 LPKEIGTLQKLEDLNLS--GLAVFPQEIGTLQNLKGLYLSNNRLTTFPQEIGTLQNLKEL 248

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L   Q++  P  + +L +LEEL L S  L +L   IG L +LK L +  N     P  I
Sbjct: 249 YLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLDLSDNQFTTFPKEI 308

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L  L +++NRL  LP+ +G +  L++L++ YNN          L++L E  V   
Sbjct: 309 GKLRKLEYLFLEHNRLTTLPKEIGTLQRLKLLNL-YNN---------RLTTLSEEIVGLQ 358

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+++       T                LP+ IG L+ L++LD+S N     P     L
Sbjct: 359 NLKNLNLRNNRLT---------------VLPQEIGQLQNLKDLDLSGNPFTTFPQEIVGL 403

Query: 348 SRLRVLRVQENP 359
             L++LR++  P
Sbjct: 404 KHLQILRLENIP 415



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/138 (28%), Positives = 65/138 (47%), Gaps = 25/138 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L ++ N+L  LP+ +G++  LE L++R N    LP  + +L +L+ L +  N LE  
Sbjct: 40  VRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLE-- 97

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                   LP+ IG L+ L+ L + NN +  LP    ML  L+ 
Sbjct: 98  -----------------------GLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQN 134

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N LE  P+ I ++
Sbjct: 135 LDLIYNRLESLPKEIGQL 152


>gi|332710873|ref|ZP_08430810.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
 gi|332350426|gb|EGJ30029.1| Leucine Rich Repeat, Miro-like protein [Moorea producens 3L]
          Length = 868

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 99/315 (31%), Positives = 176/315 (55%), Gaps = 22/315 (6%)

Query: 80  LASLIEVSSKKGTRDLNLQNKLM---DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG 136
           +  +I  + +K  + L L N ++   D +  +P  +  LS L  LDLS+N++  VP +IG
Sbjct: 7   IVKIITKAKEKQLKHLYLSNTVIFDDDQLTEIPIEVFNLSQLEELDLSDNKLTTVPESIG 66

Query: 137 GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
            L++L +LDL  N++  +P+SIG L +L  LDL GN+++ +P +L++L +L +LDL  N 
Sbjct: 67  KLTNLTQLDLSINKLTTVPESIGKLTNLTQLDLSGNELTTVPESLTKLTQLTQLDLSVNE 126

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           L+++P+S+  L +L +L +  N+L  +P ++ + ++L EL +  N+L  +PE++ K+  L
Sbjct: 127 LTTVPESLTKLTNLTQLDLSFNELTTVPESLTKLTNLTELYLSDNQLTTVPESLTKLTNL 186

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
            +L +  N +  +P +++ L++L EL +S N+L +VPESL   T L ++       DL  
Sbjct: 187 TLLDLSDNQLTTVPESLTKLTNLTELYLSDNQLTTVPESLTKLTNLTEL-------DLMV 239

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
            P     +E+++      N I  + D FR L       + E  L +    + E GA    
Sbjct: 240 NPLETPPIEIVK------NGIEAIRDYFRQLLEEGKDYIYEAKLLI----VGEAGAGKTT 289

Query: 377 QYMADLVEKRDAKTQ 391
             +A  +EK D + Q
Sbjct: 290 --LAKKIEKPDYQLQ 302


>gi|197097556|ref|NP_001124652.1| leucine-rich repeat-containing protein 40 [Pongo abelii]
 gi|75070992|sp|Q5RFE9.1|LRC40_PONAB RecName: Full=Leucine-rich repeat-containing protein 40
 gi|55725286|emb|CAH89508.1| hypothetical protein [Pongo abelii]
          Length = 602

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/310 (31%), Positives = 176/310 (56%), Gaps = 6/310 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELQNLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +   LE+LDL +N L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQFSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSNKR 411
           +   SR N R
Sbjct: 387 LPSESRVNIR 396



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 145/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIRAIITLKILDYSDKQATLIPDEVFDAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  + SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEVESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G   +++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAGILEYLRDRI 600


>gi|324509731|gb|ADY44080.1| Protein lap1, partial [Ascaris suum]
          Length = 634

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 146/269 (54%), Gaps = 8/269 (2%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
            L DN +  LP+ + K S+L  LDL  N +  +P  +  LSSL  L L    + +LP  I
Sbjct: 89  HLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDI 148

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
             L +L  LD+R NQ+  LP A+ +L  L ELDLG N LS LP ++GSL  L+ L V+ N
Sbjct: 149 DQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHN 208

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  +P ++  C  LR L V  N L ALP+ +G +  L  LS+  N I  LP ++  L +
Sbjct: 209 VLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKN 268

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  L    N L  +  ++   ++L+++ + NN   L  LP +IG L+ L  L I  NQ+ 
Sbjct: 269 LVTLKADSNALTELVPTIGECSSLLELYLFNN--QLTTLPATIGGLKELSVLSIDENQLE 326

Query: 339 VLPDSFRMLSRLRVL-----RVQENPLEV 362
            +P +    S+L +L     R++E PLEV
Sbjct: 327 EIPSAIGGCSKLSILTLRGNRLRELPLEV 355



 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 138/258 (53%), Gaps = 3/258 (1%)

Query: 104 NIEWLPDSIGKLSS-LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           N+  LP  + + +S L  L L  N+I  +P  +     L+ L L  N+I+ +P +IG L+
Sbjct: 24  NLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLI 83

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++S LP  L +   L+ LDL  N L+ LPD +  L SL  L +    L +
Sbjct: 84  ALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQ 143

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +LR L V  N+L+ LP A+ ++  L  L +  N +  LP  M SL  L +L
Sbjct: 144 LPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N L +VP+SL     L  +++  N  DL ALP+ IG+LE L EL I+ N+I  LP+
Sbjct: 204 YVDHNVLSAVPDSLTSCGHLRTLDVSQN--DLTALPKEIGDLEQLCELSIAENRIAALPN 261

Query: 343 SFRMLSRLRVLRVQENPL 360
           S   L  L  L+   N L
Sbjct: 262 SIGRLKNLVTLKADSNAL 279



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 99/288 (34%), Positives = 146/288 (50%), Gaps = 25/288 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P+ + +   L SL L +N+I+ VP  IG L +L++L L  N + +LP+ +    
Sbjct: 47  NQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCS 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDLR N ++ LP  ++RL  L  L L   +L+ LP  I  L +L+ L V  N L  
Sbjct: 107 NLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRI 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q   LREL +  N L  LP  +G +  LE L V +N +  +P +++S   LR L
Sbjct: 167 LPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE-------------- 328
           DVS N+L ++P+ +     L +++I  N   + ALP SIG L+ L               
Sbjct: 227 DVSQNDLTALPKEIGDLEQLCELSIAEN--RIAALPNSIGRLKNLVTLKADSNALTELVP 284

Query: 329 ---------ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
                    EL + NNQ+  LP +   L  L VL + EN LE  P  I
Sbjct: 285 TIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAI 332



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD + +LSSL  L L E  +  +P  I  L +L+ LD+  N++  LP +I  L  L  L
Sbjct: 121 LPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++S LP+ +  L  LE+L +  N LS++PDS+ S   L+ L V  NDL  LP  I
Sbjct: 181 DLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEI 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L EL +  NR+ ALP ++G++  L  L    N + +L  T+   SSL EL +  N
Sbjct: 241 GDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P ++     L  ++I  N   L  +P +IG    L  L +  N++R LP     L
Sbjct: 301 QLTTLPATIGGLKELSVLSIDEN--QLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRL 358

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + LRVL + +N L   P  I
Sbjct: 359 ANLRVLDLCDNILAFLPFTI 378



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 138/247 (55%), Gaps = 15/247 (6%)

Query: 130 AVPATIGGLSSL---KKLDLHANRIIELPDSI---GDLLSLVYLDLRGNQISALPVALSR 183
            VP T  G   +   ++ +LH     ELP  +      L  +YLD   NQI  +P  L R
Sbjct: 6   CVPFTCSGRVDVIEKRQCNLH-----ELPAEVERSASCLEELYLDC--NQICEIPEGLCR 58

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
             +L  L LG N +  +P +IGSLI+L++L +E N+L +LP  + +CS+L+ L +  N L
Sbjct: 59  CKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLL 118

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             LP+ V ++ +L  L +   ++ QLP  +  L +LR LDV  N+L  +P ++C    L 
Sbjct: 119 TRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLR 178

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           ++++G N  +L  LP ++G+LE+LE+L + +N +  +PDS      LR L V +N L   
Sbjct: 179 ELDLGRN--ELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTAL 236

Query: 364 PRNIVEM 370
           P+ I ++
Sbjct: 237 PKEIGDL 243



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 106/184 (57%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  +PDS+     L +LD+S+N + A+P  IG L  L +L +  NRI  LP+SIG L +L
Sbjct: 210 LSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNL 269

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           V L    N ++ L   +     L EL L +N L++LP +IG L  L  L ++ N LEE+P
Sbjct: 270 VTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIP 329

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG CS L  L +  NRL+ LP  VG++  L VL +  N +  LP T++ L +LR L +
Sbjct: 330 SAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWL 389

Query: 285 SFNE 288
           S ++
Sbjct: 390 SVDQ 393



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 3/204 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  R+L+L     + +  LP ++G L  L  L +  N + AVP ++     L+ LD+  N
Sbjct: 175 KHLRELDLGR---NELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQN 231

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            +  LP  IGDL  L  L +  N+I+ALP ++ RL  L  L   SN L+ L  +IG   S
Sbjct: 232 DLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSS 291

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +L +  N L  LP TIG    L  L +D N+L+ +P A+G    L +L++R N +++L
Sbjct: 292 LLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLREL 351

Query: 270 PTTMSSLSSLRELDVSFNELESVP 293
           P  +  L++LR LD+  N L  +P
Sbjct: 352 PLEVGRLANLRVLDLCDNILAFLP 375



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G ++L++ +   + +E +P +IG  S L  L L  NR+  +P  +G L++L+ LDL  N 
Sbjct: 311 GLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNI 370

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISAL 177
           +  LP +I  L +L  L L  +Q S L
Sbjct: 371 LAFLPFTINVLFNLRALWLSVDQTSPL 397


>gi|71981160|ref|NP_741391.2| Protein SOC-2, isoform b [Caenorhabditis elegans]
 gi|351065206|emb|CCD61152.1| Protein SOC-2, isoform b [Caenorhabditis elegans]
          Length = 558

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 2/229 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           ++LDL +  I  +P  I +L  L  L L  N+++ LP  + +LV L++L L  N L+SLP
Sbjct: 75  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 134

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           DS+ SL SL+ L +  N L E+P  I +  SL  L + YNR+ A+ E +G +  L++L V
Sbjct: 135 DSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDV 194

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N I++LP+ +  L+SL    VS+N L  VPE +    +L ++++ +N  DL  LP SI
Sbjct: 195 RENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHN--DLSELPYSI 252

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L  L  + I  N+IR +P       +L    V+ N L++ P N++ M
Sbjct: 253 GKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 301



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 145/274 (52%), Gaps = 7/274 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   I ++P+ I  L+ L +L L+ N++  LP  IG L++L  L L  N +++LP +
Sbjct: 77  LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDS 136

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L+ L  LE LDL  N L+ +P  I  + SL+ L +  N +  +   IG  S L+ L V  
Sbjct: 137 LASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRE 196

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+++ LP A+GK+ +L V  V YN++ ++P  +    SL +LD+  N+L  +P S+    
Sbjct: 197 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLV 256

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENP 359
            LV+  IG  +  +R +P  + + + LEE  + +N +++LP +   ML ++  + +  N 
Sbjct: 257 NLVR--IGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNE 314

Query: 360 LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPV 393
           L   P      G Q  V  +   +E       P+
Sbjct: 315 LTAFPAG----GPQQFVSTVTINMEHNQISKIPI 344



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IGKL+SLV   +S N +  VP  IG   SL +LDL  N + ELP SIG L+
Sbjct: 197 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLV 256

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI-------------- 208
           +LV + +R N+I  +P  L    +LEE  + SN+L  LP ++ +++              
Sbjct: 257 NLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELT 316

Query: 209 -----------------------------------SLKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N+L  LP  +G  +S+
Sbjct: 317 AFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSI 376

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+LK LPE + K+  LE+L +  N +K+LP  + +L+ LRELD+  NELE+VP
Sbjct: 377 TELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVP 436

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             + F   L K+ + +N   +  LPRSIGNL  L++L +  N +  +P+    L  L+ L
Sbjct: 437 TEIGFLQHLTKLWVQSN--KILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSL 494

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  I   G   V+QY+
Sbjct: 495 YLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYL 544



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 156/347 (44%), Gaps = 78/347 (22%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            NKL +    +P  I K+ SL +L L  NRIVAV   IG LS LK LD+  N+I ELP +
Sbjct: 150 HNKLTE----VPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSA 205

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG L SLV   +  N ++ +P  +     L +LDL  N+LS LP SIG L++L ++ +  
Sbjct: 206 IGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRY 265

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALP----EAVGKIHTLEV--------------- 258
           N +  +P  +  C  L E  V+ N L+ LP      + KIHT+ +               
Sbjct: 266 NKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQ 325

Query: 259 ------------------------------LSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
                                         L+++ N +  LP  M S +S+ EL++S N+
Sbjct: 326 FVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQ 385

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL-----------------------E 325
           L+ +PE +     L  + + NN   L+ LP  IGNL                       +
Sbjct: 386 LKVLPEDIEKLVNLEILVLSNN--QLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQ 443

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            L +L + +N+I  LP S   L  L+ LR+ EN L   P  I  + +
Sbjct: 444 HLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDS 490



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +++ S     +LNL     + ++ LP+ I KL +L  L LS N++  +P  IG L+ L++
Sbjct: 368 LDMGSWTSITELNLST---NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRE 424

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  N +  +P  IG L  L  L ++ N+I  LP ++  L  L++L LG NNL+++P+ 
Sbjct: 425 LDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEE 484

Query: 204 IGSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           IG L SLK L +  N  L  LP  +  C SL  + ++ + L  +P  +
Sbjct: 485 IGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEI 532



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 229 QCSSLRELRVDYNRLK--ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +C   ++ R+D + ++  ++P  + ++  L  L +  N +  LPT +  L +L++L +S 
Sbjct: 68  KCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSE 127

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N L S+P+SL    +L  +++ +N   L  +P  I  +  LE L +  N+I  + +    
Sbjct: 128 NALTSLPDSLASLESLETLDLRHN--KLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGN 185

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           LS+L++L V+EN +   P  I ++ +  V
Sbjct: 186 LSKLKMLDVRENKIRELPSAIGKLTSLVV 214


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 137/250 (54%), Gaps = 2/250 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+LS  ++ A+P  IG L +L++L+L  N +  LP  I  L +L  LDLR NQ++  P  
Sbjct: 53  LNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPAV 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           +  L +LE LDL  N L  LP+ IG L +L+ L +  N L   P  IGQ  +L++L +  
Sbjct: 113 IVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL ALP+ +G++  L+ L ++ N    LP  +  L +L+ L++  N+L ++P  +    
Sbjct: 173 NRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++ + NN   L   P+ IG L+ L+ L    N++  LP     L  L+ L +  N L
Sbjct: 233 NLQELYLRNN--RLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRL 290

Query: 361 EVPPRNIVEM 370
            V P+ I ++
Sbjct: 291 TVFPKEIGQL 300



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/262 (32%), Positives = 140/262 (53%), Gaps = 2/262 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N +  +P  I  L +L++LDL  N++   P  I +L  L  L
Sbjct: 63  LPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPAVIVELQKLESL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++  LP  + RL  L++L L  N L++ P  IG L +L+KL +  N L  LP  I
Sbjct: 123 DLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+ L +  N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N
Sbjct: 183 GQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L   P+ +     L  +    N   L ALP+ +G L+ L+ L++ NN++ V P     L
Sbjct: 243 RLTVFPKEIGQLQNLQMLCSPEN--RLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVE 369
             L+ L +  NP  +  R  ++
Sbjct: 301 QNLQDLELLMNPFSLKERKRIQ 322



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 159/307 (51%), Gaps = 25/307 (8%)

Query: 72  GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAV 131
           GEKL+    A   E+   K  ++LNL+  L+     LP  I +L +L  LDL +N++   
Sbjct: 57  GEKLT----ALPKEIGQLKNLQELNLKWNLLT---VLPKEIEQLENLQELDLRDNQLATF 109

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA I  L  L+ LDL  NR+I LP+ IG L +L  L L  N+++  P  + +L  L++L 
Sbjct: 110 PAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLW 169

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N L++LP  IG L +L+ L ++ N    LP  IGQ  +L+ L +  N+L  LP  +G
Sbjct: 170 LSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIG 229

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +R N +   P  +  L +L+ L    N L ++P+ +     L  +N+ NN 
Sbjct: 230 QLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNN- 288

Query: 312 ADLRALPRSIGNLEMLEELDISNNQI---------RVLPDS---FRMLSRLRVLR----V 355
             L   P+ IG L+ L++L++  N           ++ PDS    R ++   V R     
Sbjct: 289 -RLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSNLDLREVAENGVYRNLNLA 347

Query: 356 QENPLEV 362
           QE PL+V
Sbjct: 348 QEEPLKV 354



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/305 (30%), Positives = 146/305 (47%), Gaps = 42/305 (13%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+   P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 270 LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKLFPDSN 329

Query: 159 GDL------------------------LSLVYLDLRGNQISALPVALSRLVRLEELDLGS 194
            DL                        LSL Y D       + P  + +   L  L+L  
Sbjct: 330 LDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFS----QSFPKVILKFRNLRGLNLYD 385

Query: 195 NNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
              S+LP  I  L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++ 
Sbjct: 386 CGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLR 445

Query: 255 TLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
            L+ LS+  N +K  P  +  L  L++LD+S N+  +  + +     L  +N+  N   L
Sbjct: 446 NLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRN--QL 503

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
             L   IG L+ L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G   
Sbjct: 504 TNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQ 560

Query: 375 VVQYM 379
            +Q++
Sbjct: 561 NLQWL 565



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 102/182 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 391 LPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKL 450

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +   P  + +L +L++LDL  N  ++    IG L +L+ L ++ N L  L   I
Sbjct: 451 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEI 510

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL ++ N+   LP+ +GK+  L+ L +R N +  LPT +  L +L+ L +  N
Sbjct: 511 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570

Query: 288 EL 289
           +L
Sbjct: 571 QL 572



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/218 (29%), Positives = 117/218 (53%), Gaps = 2/218 (0%)

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           +L  ++ + L +  L+L G +++ALP  + +L  L+EL+L  N L+ LP  I  L +L++
Sbjct: 39  DLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLENLQE 98

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L +  N L   P  I +   L  L +  NRL  LP  +G++  L+ L +  N +   P  
Sbjct: 99  LDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKE 158

Query: 273 MSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
           +  L +L++L +S N L ++P+ +     L  +++ +N      LP+ IG L+ L+ L++
Sbjct: 159 IGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN--QFTTLPKEIGQLQNLQTLNL 216

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQ+  LP     L  L+ L ++ N L V P+ I ++
Sbjct: 217 QDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQL 254



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 84/159 (52%), Gaps = 3/159 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    LNL+    + +E LP  IG+L +L  L L +N +   PA I  L  L+KL
Sbjct: 417 EIGQLKNLEALNLE---ANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKL 473

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N+       IG L +L  L+L+ NQ++ L   + +L  L+ELDL  N  + LP  I
Sbjct: 474 DLSVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEI 533

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           G L  L+ L +  N L  LP  IGQ  +L+ L +  N+L
Sbjct: 534 GKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQL 572



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 115/246 (46%), Gaps = 30/246 (12%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  I K  +L  L+L +     +P  I  L +LK L L  N +  +P  IG        
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIG-------- 419

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
                          +L  LE L+L +N L  LP  IG L +L+KL +  N L+  P  I
Sbjct: 420 ---------------QLKNLEALNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEI 464

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L++L +  N+     + +GK+  L+ L+++ N +  L   +  L +L+ELD++ N
Sbjct: 465 EQLKKLQKLDLSVNQFTTFLKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDN 524

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + NNQ+     S +  
Sbjct: 525 QFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQNNQL-----SLKEQ 577

Query: 348 SRLRVL 353
            R+R L
Sbjct: 578 ERIRKL 583



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 79/156 (50%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE     +L   +     +R L +   +L ALP+ +G++  L+ L++++N +  LP  + 
Sbjct: 32  VEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIE 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+ELD+  N+L + P  +     L  +++  N   L  LP  IG L+ L++L +  
Sbjct: 92  QLENLQELDLRDNQLATFPAVIVELQKLESLDLSEN--RLIILPNEIGRLQNLQDLGLYK 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           N++   P     L  L+ L + EN L   P+ I ++
Sbjct: 150 NKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 185


>gi|198437403|ref|XP_002124871.1| PREDICTED: similar to soc-2 (suppressor of clear) homolog [Ciona
           intestinalis]
          Length = 954

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/286 (34%), Positives = 154/286 (53%), Gaps = 26/286 (9%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKL---MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATI 135
           KL  L E  +KK    L L   +    + IE LP ++  L++L SL LS N++  +P  I
Sbjct: 182 KLHRLPEPETKKSKSGLQLIRCIEASHNEIESLPRNLSFLTNLQSLSLSNNQLTELPQNI 241

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           G L  L  +D+  N + E+PDS G+L +L  LDLR N+++ LP ++SRL  L  LD   N
Sbjct: 242 GELQKLITVDVCQNSLSEIPDSFGNLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGN 301

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELP------------------HTIGQCS---SLR 234
            + ++P+ +  + SL+ + +  N +E +P                   T+G      S+ 
Sbjct: 302 QIKTIPEELKQIKSLQNIDLSANQIESVPTLSNMSNLVTVDLSRNAISTLGDIEDMPSME 361

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +  N+L  +P+++G I +LE   +  N I++LP T+ +LSSL+ +DVS N+L S+  
Sbjct: 362 NLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQLTSLNT 421

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           SL    TL  +  GNN   L  LP+  G L  L E+D+SNN++  L
Sbjct: 422 SLRRLGTLEILKAGNN--QLTTLPQPFGFLRSLREVDLSNNKLNTL 465



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 141/264 (53%), Gaps = 21/264 (7%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            +++  +PDS G LS+L  LDL EN++  +P ++  L  L  LD   N+I  +P+ +  +
Sbjct: 254 QNSLSEIPDSFGNLSNLRLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQI 313

Query: 162 LSLVYLDLRGNQISALP----------VALSR-----------LVRLEELDLGSNNLSSL 200
            SL  +DL  NQI ++P          V LSR           +  +E L+L  N L+ +
Sbjct: 314 KSLQNIDLSANQIESVPTLSNMSNLVTVDLSRNAISTLGDIEDMPSMENLNLSENQLAKV 373

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           PDSIG++ SL+   +  N ++ELP TIG  SSL+ + V  N+L +L  ++ ++ TLE+L 
Sbjct: 374 PDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILK 433

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
              N +  LP     L SLRE+D+S N+L ++  +      + ++    N    +   R 
Sbjct: 434 AGNNQLTTLPQPFGFLRSLREVDLSNNKLNTLVGNGPLPRGIKRLKANGNLFKGKVPGRV 493

Query: 321 IGNLEMLEELDISNNQIRVLPDSF 344
           +  L +L  LD+S+++I  LPDS 
Sbjct: 494 LHELRLLTVLDLSSSEITSLPDSI 517



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/327 (28%), Positives = 147/327 (44%), Gaps = 70/327 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + + +LP SI  L  L  L+ + N+++ +P  I   S L  +    N++  LP SIG + 
Sbjct: 91  NKLRFLPTSICALEFLTELNATYNQLIVLPRNIYKCSMLTTIRAAHNKLRALPTSIGSIP 150

Query: 163 SLVYLDLRG-------------------------------------------------NQ 173
           +L+ LD+                                                   N+
Sbjct: 151 TLLMLDVGNNALKSLPKSVYQIRKVINCSSNKLHRLPEPETKKSKSGLQLIRCIEASHNE 210

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           I +LP  LS L  L+ L L +N L+ LP +IG L  L  + V  N L E+P + G  S+L
Sbjct: 211 IESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLSNL 270

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R L +  N+L  LPE++ ++  L  L    N IK +P  +  + SL+ +D+S N++ESVP
Sbjct: 271 RLLDLRENKLTTLPESMSRLEDLITLDCAGNQIKTIPEELKQIKSLQNIDLSANQIESVP 330

Query: 294 ESLCFATTLVKMNIGNNF--------------------ADLRALPRSIGNLEMLEELDIS 333
            +L   + LV +++  N                       L  +P SIGN+E LE   ++
Sbjct: 331 -TLSNMSNLVTVDLSRNAISTLGDIEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLA 389

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPL 360
           NNQI+ LP +   LS L+ + V  N L
Sbjct: 390 NNQIQELPQTIGNLSSLQFIDVSNNQL 416



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/258 (32%), Positives = 132/258 (51%), Gaps = 22/258 (8%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D  G    L+ LD+S+NR+ ++   IG  ++LK L+   N++  LP SI  L  L  L+ 
Sbjct: 52  DRWGCEKYLIGLDVSDNRLKSLDQEIGDFANLKTLNCSKNKLRFLPTSICALEFLTELNA 111

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ+  LP  + +   L  +    N L +LP SIGS+ +L  L V  N L+ LP ++ Q
Sbjct: 112 TYNQLIVLPRNIYKCSMLTTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSVYQ 171

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
              +  +    N+L  LPE   K                   + S L  +R ++ S NE+
Sbjct: 172 IRKV--INCSSNKLHRLPEPETK------------------KSKSGLQLIRCIEASHNEI 211

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           ES+P +L F T L  +++ NN   L  LP++IG L+ L  +D+  N +  +PDSF  LS 
Sbjct: 212 ESLPRNLSFLTNLQSLSLSNN--QLTELPQNIGELQKLITVDVCQNSLSEIPDSFGNLSN 269

Query: 350 LRVLRVQENPLEVPPRNI 367
           LR+L ++EN L   P ++
Sbjct: 270 LRLLDLRENKLTTLPESM 287



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 158/295 (53%), Gaps = 4/295 (1%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I  + S+ +L+LSEN++  VP +IG + SL+   L  N+I ELP +IG+L SL ++D+  
Sbjct: 354 IEDMPSMENLNLSENQLAKVPDSIGNIESLENFRLANNQIQELPQTIGNLSSLQFIDVSN 413

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           NQ+++L  +L RL  LE L  G+N L++LP   G L SL+++ +  N L  L        
Sbjct: 414 NQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLRSLREVDLSNNKLNTLVGNGPLPR 473

Query: 232 SLRELRVDYNRLKA-LPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
            ++ L+ + N  K  +P  V  ++  L VL +  + I  LP ++  L  L+ L++  N+L
Sbjct: 474 GIKRLKANGNLFKGKVPGRVLHELRLLTVLDLSSSEITSLPDSIGRLRLLQNLNLENNQL 533

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            S+PES     +L  +N+  N   ++ LP+++ N + L  ++ ++N++  +P++   L  
Sbjct: 534 HSLPESSETMYSLKDINLSKNA--IKKLPQNLHNWKRLVTMNAAHNKLAEMPENLHQLPV 591

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCF 404
           L  L +  N LE    NI  M    V++   + + + +  T  V    S  E+ F
Sbjct: 592 LATLDMSNNELEQIDANIFHMSRLKVLRLQNNRINRINKTTNDVTLSSSLHEVDF 646



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 137/266 (51%), Gaps = 11/266 (4%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ L   IG  ++L +L+ S+N++  +P +I  L  L +L+   N++I LP +I     L
Sbjct: 70  LKSLDQEIGDFANLKTLNCSKNKLRFLPTSICALEFLTELNATYNQLIVLPRNIYKCSML 129

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI-VETNDLEEL 223
             +    N++ ALP ++  +  L  LD+G+N L SLP S+     ++K+I   +N L  L
Sbjct: 130 TTIRAAHNKLRALPTSIGSIPTLLMLDVGNNALKSLPKSV---YQIRKVINCSSNKLHRL 186

Query: 224 PHTIGQCSS-----LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           P    + S      +R +   +N +++LP  +  +  L+ LS+  N + +LP  +  L  
Sbjct: 187 PEPETKKSKSGLQLIRCIEASHNEIESLPRNLSFLTNLQSLSLSNNQLTELPQNIGELQK 246

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  +DV  N L  +P+S    + L  +++  N   L  LP S+  LE L  LD + NQI+
Sbjct: 247 LITVDVCQNSLSEIPDSFGNLSNLRLLDLREN--KLTTLPESMSRLEDLITLDCAGNQIK 304

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPP 364
            +P+  + +  L+ + +  N +E  P
Sbjct: 305 TIPEELKQIKSLQNIDLSANQIESVP 330



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 84/311 (27%), Positives = 152/311 (48%), Gaps = 30/311 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP +IG LSSL  +D+S N++ ++  ++  L +L+ L    N++  LP   G L 
Sbjct: 391 NQIQELPQTIGNLSSLQFIDVSNNQLTSLNTSLRRLGTLEILKAGNNQLTTLPQPFGFLR 450

Query: 163 SLVYLDLRGNQISAL------PVALSRLVR-------------------LEELDLGSNNL 197
           SL  +DL  N+++ L      P  + RL                     L  LDL S+ +
Sbjct: 451 SLREVDLSNNKLNTLVGNGPLPRGIKRLKANGNLFKGKVPGRVLHELRLLTVLDLSSSEI 510

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           +SLPDSIG L  L+ L +E N L  LP +     SL+++ +  N +K LP+ +     L 
Sbjct: 511 TSLPDSIGRLRLLQNLNLENNQLHSLPESSETMYSLKDINLSKNAIKKLPQNLHNWKRLV 570

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            ++  +N + ++P  +  L  L  LD+S NELE +  ++   + L  + + NN   +  +
Sbjct: 571 TMNAAHNKLAEMPENLHQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNN--RINRI 628

Query: 318 PRSIGNLEM---LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
            ++  ++ +   L E+D S N++  L +   +LS +R      N L   P +I ++    
Sbjct: 629 NKTTNDVTLSSSLHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHKLKWAT 688

Query: 375 VVQYMADLVEK 385
            + +  + ++K
Sbjct: 689 YLNFSENKIQK 699



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 87/187 (46%), Gaps = 3/187 (1%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N   + +  +P+++ +L  L +LD+S N +  + A I  +S LK L L  NRI  +  + 
Sbjct: 573 NAAHNKLAEMPENLHQLPVLATLDMSNNELEQIDANIFHMSRLKVLRLQNNRINRINKTT 632

Query: 159 GDLL---SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
            D+    SL  +D  GN++  L   +  L  +   D   N LS +P+ I  L     L  
Sbjct: 633 NDVTLSSSLHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEIPEDIHKLKWATYLNF 692

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N ++++P  + +  S+   ++  N++  +P+ + +   L  L +  N+I   P     
Sbjct: 693 SENKIQKIPKKVDRLKSIENFKLANNQITQIPQNIKRCKHLSHLDITGNSISDFPQGFFK 752

Query: 276 LSSLREL 282
           +  L EL
Sbjct: 753 MRKLNEL 759



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 97/207 (46%), Gaps = 6/207 (2%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           +D+NL     + I+ LP ++     LV+++ + N++  +P  +  L  L  LD+  N + 
Sbjct: 547 KDINLS---KNAIKKLPQNLHNWKRLVTMNAAHNKLAEMPENLHQLPVLATLDMSNNELE 603

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLV---RLEELDLGSNNLSSLPDSIGSLIS 209
           ++  +I  +  L  L L+ N+I+ +    + +     L E+D   N L  L + +  L S
Sbjct: 604 QIDANIFHMSRLKVLRLQNNRINRINKTTNDVTLSSSLHEVDFSGNELEELLEDMEVLSS 663

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           ++      N L E+P  I +      L    N+++ +P+ V ++ ++E   +  N I Q+
Sbjct: 664 VRWFDASCNKLSEIPEDIHKLKWATYLNFSENKIQKIPKKVDRLKSIENFKLANNQITQI 723

Query: 270 PTTMSSLSSLRELDVSFNELESVPESL 296
           P  +     L  LD++ N +   P+  
Sbjct: 724 PQNIKRCKHLSHLDITGNSISDFPQGF 750



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 1/155 (0%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           L LQN  ++ I    + +   SSL  +D S N +  +   +  LSS++  D   N++ E+
Sbjct: 618 LRLQNNRINRINKTTNDVTLSSSLHEVDFSGNELEELLEDMEVLSSVRWFDASCNKLSEI 677

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ I  L    YL+   N+I  +P  + RL  +E   L +N ++ +P +I     L  L 
Sbjct: 678 PEDIHKLKWATYLNFSENKIQKIPKKVDRLKSIENFKLANNQITQIPQNIKRCKHLSHLD 737

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKA-LPE 248
           +  N + + P    +   L EL    N L   LPE
Sbjct: 738 ITGNSISDFPQGFFKMRKLNELLSQGNPLTCKLPE 772


>gi|71981152|ref|NP_001021259.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
 gi|74966395|sp|Q22875.3|SHOC2_CAEEL RecName: Full=Leucine-rich repeat protein soc-2; AltName:
           Full=Suppressor of Clr protein 2; AltName:
           Full=Suppressor of activated let-60 Ras protein 8
 gi|3252977|gb|AAC39129.1| Ras-binding protein SUR-8 [Caenorhabditis elegans]
 gi|3293318|gb|AAC25697.1| leucine-rich repeat protein SOC-2 [Caenorhabditis elegans]
 gi|351065205|emb|CCD61151.1| Protein SOC-2, isoform a [Caenorhabditis elegans]
          Length = 559

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 132/229 (57%), Gaps = 2/229 (0%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           ++LDL +  I  +P  I +L  L  L L  N+++ LP  + +LV L++L L  N L+SLP
Sbjct: 76  QRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLP 135

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           DS+ SL SL+ L +  N L E+P  I +  SL  L + YNR+ A+ E +G +  L++L V
Sbjct: 136 DSLASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDV 195

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
           R N I++LP+ +  L+SL    VS+N L  VPE +    +L ++++ +N  DL  LP SI
Sbjct: 196 RENKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHN--DLSELPYSI 253

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L  L  + I  N+IR +P       +L    V+ N L++ P N++ M
Sbjct: 254 GKLVNLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTM 302



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/274 (31%), Positives = 145/274 (52%), Gaps = 7/274 (2%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS   I ++P+ I  L+ L +L L+ N++  LP  IG L++L  L L  N +++LP +
Sbjct: 78  LDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSENALTSLPDS 137

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L+ L  LE LDL  N L+ +P  I  + SL+ L +  N +  +   IG  S L+ L V  
Sbjct: 138 LASLESLETLDLRHNKLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRE 197

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+++ LP A+GK+ +L V  V YN++ ++P  +    SL +LD+  N+L  +P S+    
Sbjct: 198 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLV 257

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS-FRMLSRLRVLRVQENP 359
            LV+  IG  +  +R +P  + + + LEE  + +N +++LP +   ML ++  + +  N 
Sbjct: 258 NLVR--IGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNE 315

Query: 360 LEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPV 393
           L   P      G Q  V  +   +E       P+
Sbjct: 316 LTAFPAG----GPQQFVSTVTINMEHNQISKIPI 345



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 109/350 (31%), Positives = 165/350 (47%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IGKL+SLV   +S N +  VP  IG   SL +LDL  N + ELP SIG L+
Sbjct: 198 NKIRELPSAIGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLV 257

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI-------------- 208
           +LV + +R N+I  +P  L    +LEE  + SN+L  LP ++ +++              
Sbjct: 258 NLVRIGIRYNKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELT 317

Query: 209 -----------------------------------SLKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N+L  LP  +G  +S+
Sbjct: 318 AFPAGGPQQFVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSI 377

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+LK LPE + K+  LE+L +  N +K+LP  + +L+ LRELD+  NELE+VP
Sbjct: 378 TELNLSTNQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRELDLEENELETVP 437

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             + F   L K+ + +N   +  LPRSIGNL  L++L +  N +  +P+    L  L+ L
Sbjct: 438 TEIGFLQHLTKLWVQSN--KILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDSLKSL 495

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  I   G   V+QY+
Sbjct: 496 YLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEITAGGPSLVIQYL 545



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/347 (30%), Positives = 156/347 (44%), Gaps = 78/347 (22%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            NKL +    +P  I K+ SL +L L  NRIVAV   IG LS LK LD+  N+I ELP +
Sbjct: 151 HNKLTE----VPSVIYKIGSLETLWLRYNRIVAVDEQIGNLSKLKMLDVRENKIRELPSA 206

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG L SLV   +  N ++ +P  +     L +LDL  N+LS LP SIG L++L ++ +  
Sbjct: 207 IGKLTSLVVCLVSYNHLTRVPEEIGDCHSLTQLDLQHNDLSELPYSIGKLVNLVRIGIRY 266

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALP----EAVGKIHTLEV--------------- 258
           N +  +P  +  C  L E  V+ N L+ LP      + KIHT+ +               
Sbjct: 267 NKIRCIPSELESCQQLEEFIVESNHLQLLPPNLLTMLPKIHTVNLSRNELTAFPAGGPQQ 326

Query: 259 ------------------------------LSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
                                         L+++ N +  LP  M S +S+ EL++S N+
Sbjct: 327 FVSTVTINMEHNQISKIPIGIFSKATRLTKLNLKENELVSLPLDMGSWTSITELNLSTNQ 386

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL-----------------------E 325
           L+ +PE +     L  + + NN   L+ LP  IGNL                       +
Sbjct: 387 LKVLPEDIEKLVNLEILVLSNN--QLKKLPNQIGNLNKLRELDLEENELETVPTEIGFLQ 444

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            L +L + +N+I  LP S   L  L+ LR+ EN L   P  I  + +
Sbjct: 445 HLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEEIGHLDS 491



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +++ S     +LNL     + ++ LP+ I KL +L  L LS N++  +P  IG L+ L++
Sbjct: 369 LDMGSWTSITELNLST---NQLKVLPEDIEKLVNLEILVLSNNQLKKLPNQIGNLNKLRE 425

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL  N +  +P  IG L  L  L ++ N+I  LP ++  L  L++L LG NNL+++P+ 
Sbjct: 426 LDLEENELETVPTEIGFLQHLTKLWVQSNKILTLPRSIGNLCSLQDLRLGENNLTAIPEE 485

Query: 204 IGSLISLKKLIVETN-DLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
           IG L SLK L +  N  L  LP  +  C SL  + ++ + L  +P  +
Sbjct: 486 IGHLDSLKSLYLNDNSSLHNLPFELALCQSLEIMSIENSPLSQIPPEI 533



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 80/149 (53%), Gaps = 4/149 (2%)

Query: 229 QCSSLRELRVDYNRLK--ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +C   ++ R+D + ++  ++P  + ++  L  L +  N +  LPT +  L +L++L +S 
Sbjct: 69  KCKEAQDQRLDLSSIEITSIPSPIKELTQLTELFLYKNKLTCLPTEIGQLVNLKKLGLSE 128

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N L S+P+SL    +L  +++ +N   L  +P  I  +  LE L +  N+I  + +    
Sbjct: 129 NALTSLPDSLASLESLETLDLRHN--KLTEVPSVIYKIGSLETLWLRYNRIVAVDEQIGN 186

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
           LS+L++L V+EN +   P  I ++ +  V
Sbjct: 187 LSKLKMLDVRENKIRELPSAIGKLTSLVV 215


>gi|392338751|ref|XP_003753630.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like, partial [Rattus norvegicus]
          Length = 545

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 163/317 (51%), Gaps = 8/317 (2%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+ ++   R++ L+    +N    P  +  L +L  +DL +N++  +P  IG L  L+K 
Sbjct: 190 EIVNQTKLREIYLKQNHFEN---FPCDLCVLCNLEVIDLDDNKLKTIPEDIGHLVRLQKF 246

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            + +N ++ LP+S+     L  LDL  N I +LP +L +L  L E+ L  N L  +P  +
Sbjct: 247 YVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVGLSGNRLEKVPRLL 306

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            + +SL  L +    L  L  +     +LR L +  N +   P  +  +  LE+L++  N
Sbjct: 307 CNWVSLHLLYLRNTSLHGLRRSFKHLVNLRFLDLSQNHIDHFPVQICTLKDLEILALDDN 366

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG-NNFADLRALPRSIGN 323
            +KQLP  +SSLS L+ L ++ N+  S PE +    +L K+ IG +  + L +LP +I  
Sbjct: 367 KVKQLPPAISSLSKLKILGLTGNDFVSFPEEIFSLVSLEKLYIGQDQGSKLSSLPENIKK 426

Query: 324 LEM-LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
           L   L EL + +N +  LP++   L  L+VL + +N +E PP  + E G +A+ +++   
Sbjct: 427 LTFNLRELLLEDNLLSRLPENLDHLVNLKVLTLTDNLMEDPPMEVCEQGNEAIWRHLK-- 484

Query: 383 VEKRDAKTQPVKQKKSW 399
            E R  K    K +  W
Sbjct: 485 -ENRIRKVMATKIQAWW 500



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/292 (28%), Positives = 134/292 (45%), Gaps = 27/292 (9%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ +P  I  L  L  + L  N+I  +P  I  L  +K L LH N +  L   +G L +
Sbjct: 66  NLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQELGSLSN 125

Query: 164 LVYLDLRGN------------------------QISALPVALSR-LVRLEELDLGSNNLS 198
           L  LDL GN                         ++ +P  + + L  LE L L  N L 
Sbjct: 126 LESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLGLSENYLE 185

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           SLP  I +   L+++ ++ N  E  P  +    +L  + +D N+LK +PE +G +  L+ 
Sbjct: 186 SLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDNKLKTIPEDIGHLVRLQK 245

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
             V  N++  LP ++S    L  LD++ N + S+P SL   T L ++ +  N   L  +P
Sbjct: 246 FYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVGLSGN--RLEKVP 303

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           R + N   L  L + N  +  L  SF+ L  LR L + +N ++  P  I  +
Sbjct: 304 RLLCNWVSLHLLYLRNTSLHGLRRSFKHLVNLRFLDLSQNHIDHFPVQICTL 355



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 121/250 (48%), Gaps = 10/250 (4%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +D S   +  +P  I  L  L+++ L  N+I E+P  I  L  +  L L  N +  L   
Sbjct: 60  IDGSNQNLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQE 119

Query: 181 LSRLVRLEELDLGSN--NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR- 237
           L  L  LE LDL  N   LSSL   I  L +L++L +    L E+P   G C SL  L  
Sbjct: 120 LGSLSNLESLDLSGNLLVLSSL-QVICRLRTLRELRLYNTGLTEVPS--GICKSLHHLEL 176

Query: 238 --VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
             +  N L++LP+ +     L  + ++ N+ +  P  +  L +L  +D+  N+L+++PE 
Sbjct: 177 LGLSENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDNKLKTIPED 236

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L K  + +N   L  LP S+ +   L  LD+++N I  LP S   L+ L  + +
Sbjct: 237 IGHLVRLQKFYVASNH--LMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVGL 294

Query: 356 QENPLEVPPR 365
             N LE  PR
Sbjct: 295 SGNRLEKVPR 304



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/245 (24%), Positives = 112/245 (45%), Gaps = 27/245 (11%)

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           ++D     +  +P  +  L  LEE+ L +N +S +P  I  L  +K L +  N L+ L  
Sbjct: 59  FIDGSNQNLKTIPPEILALKELEEVHLENNQISEIPQGIQHLEKIKVLYLHNNSLQNLCQ 118

Query: 226 TIGQCSSLRELRVD-----------------------YNR-LKALPEAVGK-IHTLEVLS 260
            +G  S+L  L +                        YN  L  +P  + K +H LE+L 
Sbjct: 119 ELGSLSNLESLDLSGNLLVLSSLQVICRLRTLRELRLYNTGLTEVPSGICKSLHHLELLG 178

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N ++ LP  + + + LRE+ +  N  E+ P  LC    L  +++ +N   L+ +P  
Sbjct: 179 LSENYLESLPKEIVNQTKLREIYLKQNHFENFPCDLCVLCNLEVIDLDDN--KLKTIPED 236

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           IG+L  L++  +++N +  LP+S     +L VL +  N +   P ++ ++     V    
Sbjct: 237 IGHLVRLQKFYVASNHLMGLPESLSHCRKLSVLDLTHNSIHSLPYSLEQLTELTEVGLSG 296

Query: 381 DLVEK 385
           + +EK
Sbjct: 297 NRLEK 301


>gi|146328669|ref|YP_001208947.1| leucine rich repeat domain-containing protein [Dichelobacter
           nodosus VCS1703A]
 gi|146232139|gb|ABQ13117.1| Leucine Rich Repeat domain protein [Dichelobacter nodosus VCS1703A]
          Length = 460

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 151/272 (55%), Gaps = 5/272 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  R L++Q+  + +   LP  IG+LS+L  L LS  +++ +P  +G L + + L
Sbjct: 141 EIGQLKQLRRLSIQSYALTD---LPAEIGQLSALEDLSLSCIQLMTLPEELGQLKNCRSL 197

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++ +LP+S+G L  L +L  RG     LP ++  LV+L  L      +S LP +I
Sbjct: 198 LLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHTLISRLPSTI 257

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G LI L++L + +N LE LP  IG+   L++L ++ N LK LP  +G +  LE L +  N
Sbjct: 258 GQLIYLQELDLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPPEIGHLINLESLQIWSN 317

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           ++  LP T+  L  L EL +  NEL S+P  +     L  ++I NN   L  LP  IG L
Sbjct: 318 HLIALPATIGQLKKLAELHLKNNELISLPNEIGRLQALQTLDIRNN--QLAQLPVEIGLL 375

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
             L +L+I +N++  LPD    LS +  L+++
Sbjct: 376 MQLTKLEIRDNRLSDLPDELWALSDMNQLKLE 407



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/266 (34%), Positives = 143/266 (53%), Gaps = 2/266 (0%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +LP  IG+L  L SL+L   R   +P  IG L SL+ L+L    +  LP  IG L  L  
Sbjct: 91  YLPPEIGQLKQLQSLNLCWCRFNTLPPEIGQLESLQYLNLEWGSLATLPKEIGQLKQLRR 150

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           L ++   ++ LP  + +L  LE+L L    L +LP+ +G L + + L+++ N L++LP +
Sbjct: 151 LSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEELGQLKNCRSLLLDCNQLQQLPES 210

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +G    L+ L       + LPE++G +  L  LS  +  I +LP+T+  L  L+ELD+S 
Sbjct: 211 LGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHTLISRLPSTIGQLIYLQELDLSS 270

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+LE +P  +     L K+++ NN   L+ LP  IG+L  LE L I +N +  LP +   
Sbjct: 271 NQLEVLPPEIGKLKQLKKLHLNNNV--LKVLPPEIGHLINLESLQIWSNHLIALPATIGQ 328

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGA 372
           L +L  L ++ N L   P  I  + A
Sbjct: 329 LKKLAELHLKNNELISLPNEIGRLQA 354



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/262 (34%), Positives = 142/262 (54%), Gaps = 7/262 (2%)

Query: 104 NIEW-----LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+EW     LP  IG+L  L  L +    +  +PA IG LS+L+ L L   +++ LP+ +
Sbjct: 129 NLEWGSLATLPKEIGQLKQLRRLSIQSYALTDLPAEIGQLSALEDLSLSCIQLMTLPEEL 188

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
           G L +   L L  NQ+  LP +L  L +L+ L         LP+SIG+L+ L  L     
Sbjct: 189 GQLKNCRSLLLDCNQLQQLPESLGALEQLQFLTFRGGMFQKLPESIGNLVQLHTLSASHT 248

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            +  LP TIGQ   L+EL +  N+L+ LP  +GK+  L+ L +  N +K LP  +  L +
Sbjct: 249 LISRLPSTIGQLIYLQELDLSSNQLEVLPPEIGKLKQLKKLHLNNNVLKVLPPEIGHLIN 308

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  L +  N L ++P ++     L ++++ NN  +L +LP  IG L+ L+ LDI NNQ+ 
Sbjct: 309 LESLQIWSNHLIALPATIGQLKKLAELHLKNN--ELISLPNEIGRLQALQTLDIRNNQLA 366

Query: 339 VLPDSFRMLSRLRVLRVQENPL 360
            LP    +L +L  L +++N L
Sbjct: 367 QLPVEIGLLMQLTKLEIRDNRL 388


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 143/257 (55%), Gaps = 2/257 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD I +L  +  L+L++  ++ +P  IG LS L+ ++   N +  +P ++  +  L  L
Sbjct: 125 LPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQL 184

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++ +LP +LS L  L +L L  N+L+SLPDSIG L ++  + +  N LE +P TI
Sbjct: 185 DLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETI 244

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G   S+ +L + +N + ALPE++GK+ TL +L V  N I +LP+++    ++ EL ++ N
Sbjct: 245 GDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGDWPNITELMLTEN 304

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L  +P S+     +  +N+  N   L  LP  +G    L  L + +N +  LP      
Sbjct: 305 LLTELPASIGNLQKMTTLNVDRN--QLEVLPPELGKCSSLNILSVRDNMLTYLPTELGNA 362

Query: 348 SRLRVLRVQENPLEVPP 364
           + LRVL V  N L+  P
Sbjct: 363 TNLRVLNVSGNRLDCLP 379



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/266 (31%), Positives = 152/266 (57%), Gaps = 4/266 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN ++ +P  I +   LV L++S N I  +P  I    SL+ LD+  N + +LPD I 
Sbjct: 71  LSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGIC 130

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+ + +L+L    +  +P  +  L +L+ ++   N L S+P ++ S+  L++L +  N+
Sbjct: 131 QLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNNE 190

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           LE LP ++ + ++LR+L +D N L +LP+++GK+H +  + +  N ++ +P T+  L S+
Sbjct: 191 LESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSI 250

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L +S N ++++PES+    TL  + +  N   +  LP SIG+   + EL ++ N +  
Sbjct: 251 TDLTLSHNFIDALPESIGKLKTLSILKVDQNR--ISKLPSSIGDWPNITELMLTENLLTE 308

Query: 340 LPDSFRMLSRLRVLRVQENPLEV-PP 364
           LP S   L ++  L V  N LEV PP
Sbjct: 309 LPASIGNLQKMTTLNVDRNQLEVLPP 334



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 125/207 (60%), Gaps = 3/207 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L+L N   + +E LPDS+ +L++L  L L  N + ++P +IG L ++  +DL  N+
Sbjct: 180 GLEQLDLGN---NELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENK 236

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  +P++IGDL S+  L L  N I ALP ++ +L  L  L +  N +S LP SIG   ++
Sbjct: 237 LESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGDWPNI 296

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
            +L++  N L ELP +IG    +  L VD N+L+ LP  +GK  +L +LSVR N +  LP
Sbjct: 297 TELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLP 356

Query: 271 TTMSSLSSLRELDVSFNELESVPESLC 297
           T + + ++LR L+VS N L+ +P SL 
Sbjct: 357 TELGNATNLRVLNVSGNRLDCLPISLA 383



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/265 (32%), Positives = 145/265 (54%), Gaps = 2/265 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP    +L  L  L LS+N +  +PA I     L  L++  N I ELP++I    
Sbjct: 51  NQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCK 110

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  LD+ GN ++ LP  + +LV ++ L+L   +L  +P  IG+L  L+ +    N L+ 
Sbjct: 111 SLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQS 170

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P+T+     L +L +  N L++LP+++ ++  L  L +  N++  LP ++  L ++  +
Sbjct: 171 IPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCM 230

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N+LESVPE++    ++  + + +NF D  ALP SIG L+ L  L +  N+I  LP 
Sbjct: 231 DLSENKLESVPETIGDLHSITDLTLSHNFID--ALPESIGKLKTLSILKVDQNRISKLPS 288

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNI 367
           S      +  L + EN L   P +I
Sbjct: 289 SIGDWPNITELMLTENLLTELPASI 313



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 135/251 (53%), Gaps = 2/251 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +L  L L  N+I  +P     L  L+KL L  N + ++P  I   + LV L++  N I+ 
Sbjct: 42  TLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAE 101

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           LP  +     LE LD+  N L+ LPD I  L+ +K L +    L  +P  IG  S L+ +
Sbjct: 102 LPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTM 161

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
               N L+++P  +  I  LE L +  N ++ LP ++S L++LR+L +  N L S+P+S+
Sbjct: 162 ECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSI 221

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                +V M++  N   L ++P +IG+L  + +L +S+N I  LP+S   L  L +L+V 
Sbjct: 222 GKLHNIVCMDLSEN--KLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVD 279

Query: 357 ENPLEVPPRNI 367
           +N +   P +I
Sbjct: 280 QNRISKLPSSI 290



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/285 (32%), Positives = 153/285 (53%), Gaps = 9/285 (3%)

Query: 57  KVPIMIMCMCCVGQ-DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKL 115
           K+P  I  + C+   +   +SLI++   I   SK  T  +  +  L+ +I +   SIG L
Sbjct: 124 KLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQT--MECRENLLQSIPYTLCSIGGL 181

Query: 116 SSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQIS 175
             L   DL  N + ++P ++  L++L+ L L  N +  LPDSIG L ++V +DL  N++ 
Sbjct: 182 EQL---DLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLE 238

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           ++P  +  L  + +L L  N + +LP+SIG L +L  L V+ N + +LP +IG   ++ E
Sbjct: 239 SVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSILKVDQNRISKLPSSIGDWPNITE 298

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N L  LP ++G +  +  L+V  N ++ LP  +   SSL  L V  N L  +P  
Sbjct: 299 LMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTE 358

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           L  AT L  +N+  N  D   LP S+ +L+ L+ L +S NQ + L
Sbjct: 359 LGNATNLRVLNVSGNRLD--CLPISLASLK-LKALWLSENQSQPL 400



 Score = 43.1 bits (100), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 56/132 (42%), Gaps = 26/132 (19%)

Query: 240 YNRLKALPEAVGKI-HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           ++ L  +PE V +   TLE L +  N IK LP     L  LR+L +S NEL+ +P  +  
Sbjct: 26  HSSLLVVPEDVLRYARTLEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQ 85

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              LV +NI                         S N I  LP++ +    L VL +  N
Sbjct: 86  FVYLVDLNI-------------------------SRNDIAELPENIKFCKSLEVLDISGN 120

Query: 359 PLEVPPRNIVEM 370
           PL   P  I ++
Sbjct: 121 PLTKLPDGICQL 132


>gi|126305957|ref|XP_001379454.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Monodelphis domestica]
          Length = 598

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 158/278 (56%), Gaps = 4/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P  IG L +L+KL++  N++  LP+ +  L 
Sbjct: 87  NKLQSLSDDLRLLPALTILDMHDNQLTSLPCAIGELENLQKLNVSHNKLKMLPEELTKLR 146

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P     L +LE+LDL +N L+++P S  SL  L KL + +N ++ 
Sbjct: 147 NLKVLFLQYNELTCVPEGFGGLDKLEDLDLSNNRLTTVPASFSSLSKLMKLNLASNQMKN 206

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L    N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 207 LPAEITRMKRLKHLDCTSNYLETIPSELANMESLELLYLRRNKLRFLP-EFPSCMLLKEL 265

Query: 283 DVSFNELESVPES-LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            +  N++E +    L    ++  +++ +N   L+++P  I  L+ LE LD++NN +R LP
Sbjct: 266 HIGENQIEEITAGHLKHLKSVHVLDLRDN--KLKSIPDEITLLQALERLDLTNNDVRSLP 323

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
                L  L+ L ++ NPL    R ++  G Q V++Y+
Sbjct: 324 HILGTLPHLKFLALEGNPLRTIRRELLNKGTQEVLKYL 361



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 142/315 (45%), Gaps = 49/315 (15%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           +  L S+  LDL +N++ ++P  I  L +L++LDL  N +  LP  +G L  L +L L G
Sbjct: 280 LKHLKSVHVLDLRDNKLKSIPDEITLLQALERLDLTNNDVRSLPHILGTLPHLKFLALEG 339

Query: 172 NQI--------------------------------SALPVALS----------RLVRLEE 189
           N +                                S +  A++           +  L+ 
Sbjct: 340 NPLRTIRRELLNKGTQEVLKYLRSKIKDDTPNQNDSCIETAMTLPSQSRVNTHAMTTLKL 399

Query: 190 LDLGSNNLSSLPDSIGSLI---SLKKLIVETNDLEELPHTIGQC-SSLRELRVDYNRLKA 245
           LD      + +PD +   I   ++  +    N L E+P  I +  +++ ++ + +N+L  
Sbjct: 400 LDYSDKKATLIPDEVFDAIGSNTITSINFTKNHLNEIPQRIVELKATVCDVNLGFNKLSC 459

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           +   +  +H L  L +R N +  LP  M +LS L+ +++SFN L++ P  L    TL  +
Sbjct: 460 ISAELCALHKLIHLDIRNNLLTSLPEEMEALSRLQTINLSFNRLQAFPCVLYRLRTLETV 519

Query: 306 NIGNNFADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            +GNN   L ++ P  +  ++ L  LD+ NN +  +P        LR L ++ NP   P 
Sbjct: 520 LLGNN--QLGSVDPLRLQQMDRLATLDLQNNDLLHVPPELGNCVSLRTLLLEGNPFRTPR 577

Query: 365 RNIVEMGAQAVVQYM 379
             I+  G  AV++Y+
Sbjct: 578 AAILARGTDAVLEYL 592


>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Loxodonta africana]
          Length = 602

 Score =  135 bits (339), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 94/290 (32%), Positives = 166/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ + D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LDL SN L+++P S  +L SL +L + +N L+ 
Sbjct: 152 NLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVPVSFSALSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N +  LP    S   L+EL
Sbjct: 212 LPAEISRMKKLKHLDCNSNLLETIPSELAGMESLELLYLRRNKLHSLP-QFPSCRLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ + + +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLGAEHLKHLNSILVLELRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + + D  TQ
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-RDDRPTQ 376



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 161/354 (45%), Gaps = 56/354 (15%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL SL +  S +  ++L++     + IE L  + +  L+S++ L+L +N++ +VP  I  
Sbjct: 254 KLHSLPQFPSCRLLKELHVGE---NQIEMLGAEHLKHLNSILVLELRDNKLKSVPDEITL 310

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L SL++LDL  N I  LP S+G+L  L +L L GN +                       
Sbjct: 311 LQSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 177 -----------------LP----VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
                            LP    V +  +  L+ LD      +S+PD +    ++K  IV
Sbjct: 370 RDDRPTQSDSVTETAMTLPSESRVNVHAITTLKTLDYSDKQKTSIPDEV--FDAVKSHIV 427

Query: 216 ET-----NDLEELPHTIGQCSSL-RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
            +     N+L E+P  I +   +  ++ + +N+L  +   +  +  L  L +R N +  L
Sbjct: 428 TSVNFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFVSLELCMLQKLTFLDLRNNFLNSL 487

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  M SL  L+ +++SFN  + +PE L    TL  + I NN       P+ +  +E L  
Sbjct: 488 PEEMESLIRLQMINLSFNRFKILPEVLYRIPTLETVLISNNQVG-SVDPQKMKMMENLTT 546

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           LD+ NN +  +P        LR L +  NP  VP   I+  G  A+++Y+ D +
Sbjct: 547 LDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRDRI 600



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ +   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 84  LTKLIISNNKLQSITDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 141

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  LS L  L +  N L   P
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVP 190


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/258 (34%), Positives = 150/258 (58%), Gaps = 2/258 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P++I  L +L  LD+S N +  +P     L +L  L L+   ++ LP  IG L 
Sbjct: 93  NDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLT 152

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +LV L+LR N I  LP ++S LV+LE LDLGSNN+  LP+ IGSL SL++L ++ N+L++
Sbjct: 153 NLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQD 212

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG    L ++ V  N+L  +P+ +  +  L  L +  N+++ +P  + SL  L  L
Sbjct: 213 LPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSIL 272

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L  +P+ +    +L ++ +  N+  L  LP +IG L +L  L++  NQ++ +P 
Sbjct: 273 KLDQNKLGFLPQEIGNCESLTELILTENY--LEELPSTIGRLRLLSNLNVDRNQLKEIPV 330

Query: 343 SFRMLSRLRVLRVQENPL 360
                 RL V+ +++N L
Sbjct: 331 EIGQCVRLNVVSLRDNRL 348



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 144/251 (57%), Gaps = 3/251 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L++LVSL+L EN I  +P ++  L  L+ LDL +N I ELP+ IG L SL  L
Sbjct: 144 LPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQEL 203

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++  LP  +  L +L ++D+  N L+ +PD I  L +L  L +  NDLE++P  I
Sbjct: 204 WLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGI 263

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L  L++D N+L  LP+ +G   +L  L +  N +++LP+T+  L  L  L+V  N
Sbjct: 264 GSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRN 323

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L+ +P  +     L  +++ +N   L  LP+ +GNL+ L  LD+S N++  LP +   L
Sbjct: 324 QLKEIPVEIGQCVRLNVVSLRDNR--LLRLPQELGNLKELHVLDVSGNKLEYLPITITNL 381

Query: 348 SRLRVLRVQEN 358
             L  L + EN
Sbjct: 382 -HLNALWLSEN 391



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/268 (34%), Positives = 144/268 (53%), Gaps = 8/268 (2%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  +  L +L+ +D+S N I  +P  I  L +L+ LD+ +N + +LP+   
Sbjct: 67  LSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFT 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L +L L    +  LP  +  L  L  L+L  N +  LP S+  L+ L+ L + +N+
Sbjct: 127 QLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSMSLLVKLEILDLGSNN 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           ++ELP  IG   SL+EL +D N L+ LP  +G +  L  + V  N +  +P  +  L +L
Sbjct: 187 IKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L +S N+LE +PE +     L  + +  N   L  LP+ IGN E L EL ++ N +  
Sbjct: 247 TDLCLSQNDLEDIPEGIGSLKKLSILKLDQN--KLGFLPQEIGNCESLTELILTENYLEE 304

Query: 340 LPDS---FRMLSRLRVLRVQ--ENPLEV 362
           LP +    R+LS L V R Q  E P+E+
Sbjct: 305 LPSTIGRLRLLSNLNVDRNQLKEIPVEI 332



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 138/269 (51%), Gaps = 6/269 (2%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP    +L  L  L LS+N I  +P  +  L +L ++D+  N I ++P++I
Sbjct: 47  NQLKD----LPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENI 102

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
             L +L  LD+  N ++ LP   ++L  L  L L   +L  LP  IGSL +L  L +  N
Sbjct: 103 KFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELREN 162

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            ++ LP ++     L  L +  N +K LPE +G + +L+ L +  N ++ LP  + +L  
Sbjct: 163 MIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRK 222

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L ++DVS N+L  +P+ +C    L  + +  N  DL  +P  IG+L+ L  L +  N++ 
Sbjct: 223 LTQIDVSENQLTYIPDEICGLQNLTDLCLSQN--DLEDIPEGIGSLKKLSILKLDQNKLG 280

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LP        L  L + EN LE  P  I
Sbjct: 281 FLPQEIGNCESLTELILTENYLEELPSTI 309


>gi|297278929|ref|XP_001097063.2| PREDICTED: leucine-rich repeat-containing protein 7 isoform 1
           [Macaca mulatta]
          Length = 1575

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/334 (31%), Positives = 168/334 (50%), Gaps = 30/334 (8%)

Query: 61  MIMCMCCVGQDGEKLSLIKLA--SLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLS 116
           ++ C C  G++ E +S++  +  SL +V  +    +  L+   +D   IE LP  +    
Sbjct: 49  LVPCRCFRGEE-EIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQ 107

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           +L  L + +N +  +P TI  L +LK+LD+  N + E P++I     L  ++   N IS 
Sbjct: 108 ALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISK 167

Query: 177 LPVALS-----------------------RLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LP   +                       RLV+L  L+L  N+L +LP S+  L  L++L
Sbjct: 168 LPEGFTQLLNLKKLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERL 227

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N+  ELP  + Q  +LREL +D N L+ LP ++GK+  L  L +  N I+ +   +
Sbjct: 228 DLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDI 287

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           S   +L +L +S N L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S
Sbjct: 288 SGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCS 345

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N++  LP +   L  LR L V EN L   PR I
Sbjct: 346 CNELESLPSTIGYLHSLRTLAVDENFLPELPREI 379



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 2/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP SIGKL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 246 NLRELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 305

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 306 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 365

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 366 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 425

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 426 TKLKELAALWLSDNQ 440



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 87/238 (36%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ KL+ L  LDL  N    +P  +  + +L++L +  N +  LP SIG L 
Sbjct: 209 NHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGSIGKLK 268

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            LVYLD+  N+I  + + +S    LE+L L SN L  LPDSIG L  L  L V+ N L  
Sbjct: 269 MLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTM 328

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP+TIG  S L E     N L++LP  +G +H+L  L+V  N + +LP  + S  ++  +
Sbjct: 329 LPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVM 388

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  L +S+NQ + L
Sbjct: 389 SLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFTKLKELAALWLSDNQSKAL 444



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 139/254 (54%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L  L  L+L EN +  +P ++  L+ L++LDL  N   ELP+ +  + +L
Sbjct: 188 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNL 247

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N +  LP ++ +L  L  LD+  N + ++   I    +L+ L++ +N L++LP
Sbjct: 248 RELWMDNNALQVLPGSIGKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLP 307

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP  +G +  LE      N ++ LP+T+  L SLR L V
Sbjct: 308 DSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAV 367

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  M++ +N   L  LP  IG ++ L  L++S+N+++ LP SF
Sbjct: 368 DENFLPELPREIGSCKNVTVMSLRSN--KLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 425

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 426 TKLKELAALWLSDN 439



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 96/184 (52%), Gaps = 2/184 (1%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           LEEL L +N +  LP  + +  +L+KL +  NDL  LP TI    +L+EL +  N ++  
Sbjct: 86  LEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEF 145

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +     L ++    N I +LP   + L +L++L ++   LE +P +      L  + 
Sbjct: 146 PENIKCCKCLTIIEASVNPISKLPEGFTQLLNLKKLYLNDAFLEFLPANFGRLVKLRILE 205

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           +  N   L+ LP+S+  L  LE LD+ NN+   LP+    +  LR L +  N L+V P +
Sbjct: 206 LRENH--LKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGS 263

Query: 367 IVEM 370
           I ++
Sbjct: 264 IGKL 267


>gi|410921926|ref|XP_003974434.1| PREDICTED: leucine-rich repeat-containing protein 7-like [Takifugu
           rubripes]
          Length = 1634

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N I   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 104 LPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 163

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RL +L  L+L  N+L ++P SI  L  L++L + +N+  ++P  +
Sbjct: 164 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSDVPEVL 223

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  SL+EL +D N L+++P  +GK+  L  L +  N I+ L T +S   +L +L +S N
Sbjct: 224 EQIHSLKELWLDNNSLQSIPGCLGKLRQLRYLDLAKNRIETLDTDISGCEALEDLLLSSN 283

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L +LP +IG+L +LEE D S N++  LP +   L
Sbjct: 284 MLQHLPDSIGMLKKLTTLKVDDN--QLTSLPNTIGSLSLLEEFDCSCNELESLPPTIGYL 341

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR     EN L   PR +
Sbjct: 342 HSLRTFAADENFLTELPREV 361



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 81/218 (37%), Positives = 119/218 (54%), Gaps = 2/218 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G LS L+ L+L  N +  +P SI  L  L
Sbjct: 147 ITKLPDGFTQLLNLTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQL 206

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L ++  L+EL L +N+L S+P  +G L  L+ L +  N +E L 
Sbjct: 207 ERLDLGSNEFSDVPEVLEQIHSLKELWLDNNSLQSIPGCLGKLRQLRYLDLAKNRIETLD 266

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ SLS L E D 
Sbjct: 267 TDISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLTSLPNTIGSLSLLEEFDC 326

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
           S NELES+P ++ +  +L       NF  L  LPR +G
Sbjct: 327 SCNELESLPPTIGYLHSLRTFAADENF--LTELPREVG 362



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 37/121 (30%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + S   +L EL +  N++E +P+ L     L K+++ +
Sbjct: 39  GEEEVISVLDYSHCSLQQVPKEIFSFERTLEELYLDANQIEELPKQLFSCQALKKLSMPD 98

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL  LP +I +L  L+ELDIS N I+  PD+ +    L V+    NP+   P    +
Sbjct: 99  N--DLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQ 156

Query: 370 M 370
           +
Sbjct: 157 L 157



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/161 (26%), Positives = 75/161 (46%), Gaps = 52/161 (32%)

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           +L EL +D N+++ LP+ +     L+ LS+  N++  LPTT++SL +L+ELD+S N ++ 
Sbjct: 67  TLEELYLDANQIEELPKQLFSCQALKKLSMPDNDLSNLPTTIASLVNLKELDISKNGIQE 126

Query: 292 VPESL--CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM--- 346
            P+++  C   ++V+ ++                           N I  LPD F     
Sbjct: 127 FPDNIKCCKGLSVVEASV---------------------------NPITKLPDGFTQLLN 159

Query: 347 --------------------LSRLRVLRVQENPLEVPPRNI 367
                               LS+LR+L ++EN L+  P++I
Sbjct: 160 LTQLFLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSI 200


>gi|21361633|ref|NP_060238.3| leucine-rich repeat-containing protein 40 [Homo sapiens]
 gi|74761553|sp|Q9H9A6.1|LRC40_HUMAN RecName: Full=Leucine-rich repeat-containing protein 40
 gi|10434638|dbj|BAB14326.1| unnamed protein product [Homo sapiens]
 gi|14250313|gb|AAH08586.1| Leucine rich repeat containing 40 [Homo sapiens]
 gi|119626865|gb|EAX06460.1| leucine rich repeat containing 40 [Homo sapiens]
 gi|325463579|gb|ADZ15560.1| leucine rich repeat containing 40 [synthetic construct]
          Length = 602

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 98/308 (31%), Positives = 176/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L  LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLRSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 146/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLRSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VDLSFNKLSFISLELCVLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAAILEYLRDRI 600


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 103/332 (31%), Positives = 161/332 (48%), Gaps = 29/332 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPPR 365
           N++  LP S   L+ LR      N L ++PP 
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPPE 340



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|443689982|gb|ELT92244.1| hypothetical protein CAPTEDRAFT_174612, partial [Capitella teleta]
          Length = 481

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 173/353 (49%), Gaps = 66/353 (18%)

Query: 81  ASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
           ASL E   K     L L + + + ++ LPD++ K+  L  L L EN++ A+P TIG  S 
Sbjct: 50  ASLFENLEK-----LTLFSAVGNELKQLPDTMAKMRDLQKLFLQENQLGALPHTIGAFSQ 104

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           LK +++  NR+  LPDS+ +L +L  + L  NQ+  LP +  +L  L+ L++  N L+ L
Sbjct: 105 LKVMNIVGNRVKSLPDSVSELSALEEIYLDENQLEGLPSSFVQLTCLQRLEISDNILAHL 164

Query: 201 PDSIGSLISLKKLIVETNDLE-ELPHTIGQCSSLRELRVDYNR----------------- 242
           P  IG+L  L+ L V  N LE  LP + G  SS+ E+ + +N+                 
Sbjct: 165 PKDIGNLSKLRVLNVSGNKLEGSLPESFGDISSVCEIDLSHNQLSELPPKCRFNQSLVKL 224

Query: 243 ------LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS---SLSSLRELDVSFNELESVP 293
                 L++LP+ +  +  ++ LS R N +++ P T S   + + L+ LD+S N +  +P
Sbjct: 225 FAEQNVLQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTDLKVLDISGNFISGLP 284

Query: 294 ESLCFATTLVKMNIGN-------------NFAD---------------------LRALPR 319
           ES+     L K+ IG+             N+ D                     +  LP 
Sbjct: 285 ESIGNLKKLEKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPE 344

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             G L  LE +D+  NQ+R LPDSF  L  LRV ++ +N LE  P NI E+ +
Sbjct: 345 DFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELKS 397



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 138/271 (50%), Gaps = 18/271 (6%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S G +SS+  +DLS N++  +P       SL KL    N +  LPD I  L ++ +L
Sbjct: 188 LPESFGDISSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHL 247

Query: 168 DLRGNQISALPVALS---RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET------- 217
             R N +   P   S       L+ LD+  N +S LP+SIG+L  L+K+ + +       
Sbjct: 248 SFRDNVLRRTPFTESFGETSTDLKVLDISGNFISGLPESIGNLKKLEKIQIGSVICELER 307

Query: 218 ------NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
                 N +++LP      + L+E  +D N++  LPE  G++  LE + +  N +++LP 
Sbjct: 308 RHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPD 367

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
           +   L SLR   +S N LE +PE++    +LV + + NN   +  +P S+G L  L+ LD
Sbjct: 368 SFCQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNN--QISDVPSSLGELSNLQSLD 425

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
           + +N    LP     L+ L  L V EN  E+
Sbjct: 426 LFHNLFTELPACLSKLTNLVRLDVYENKFEM 456



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 145/294 (49%), Gaps = 38/294 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI-IELPDSIGDL 161
           + +E LP S  +L+ L  L++S+N +  +P  IG LS L+ L++  N++   LP+S GD+
Sbjct: 136 NQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLEGSLPESFGDI 195

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            S+  +DL  NQ+S LP        L +L    N L SLPD I  L ++K L    N L 
Sbjct: 196 SSVCEIDLSHNQLSELPPKCRFNQSLVKLFAEQNVLQSLPDWINHLPNVKHLSFRDNVLR 255

Query: 222 ELPHT--IGQCSS-LRELRVDYNRLKALPEAVGKIHTLEVLSV---------RY----NN 265
             P T   G+ S+ L+ L +  N +  LPE++G +  LE + +         R+    N 
Sbjct: 256 RTPFTESFGETSTDLKVLDISGNFISGLPESIGNLKKLEKIQIGSVICELERRHFQNGNW 315

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN--------FADLRAL 317
           I QLP+  S ++ L+E  +  N++  +PE       L  +++G N        F  LR+L
Sbjct: 316 IDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSL 375

Query: 318 -------------PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                        P +IG L+ L +L + NNQI  +P S   LS L+ L +  N
Sbjct: 376 RVCQLSKNLLECLPENIGELKSLVDLRLDNNQISDVPSSLGELSNLQSLDLFHN 429



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 113/222 (50%), Gaps = 16/222 (7%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPAT--IGGLSS-LKKLDLHANRIIELPDSIGDL 161
           ++ LPD I  L ++  L   +N +   P T   G  S+ LK LD+  N I  LP+SIG+L
Sbjct: 231 LQSLPDWINHLPNVKHLSFRDNVLRRTPFTESFGETSTDLKVLDISGNFISGLPESIGNL 290

Query: 162 LSLVYLDL-------------RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
             L  + +              GN I  LP   S +  L+E  L  N +S LP+  G L+
Sbjct: 291 KKLEKIQIGSVICELERRHFQNGNWIDQLPSRFSHMTMLKEAYLDENQISELPEDFGRLV 350

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
           +L+ + +  N L  LP +  Q  SLR  ++  N L+ LPE +G++ +L  L +  N I  
Sbjct: 351 NLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELKSLVDLRLDNNQISD 410

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           +P+++  LS+L+ LD+  N    +P  L   T LV++++  N
Sbjct: 411 VPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYEN 452



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/170 (32%), Positives = 94/170 (55%), Gaps = 6/170 (3%)

Query: 219 DLEELPHTIGQ---CSSLRELRVDYNRLKALPEAVGK-IHTLEVLSVRYNNIKQLPTTMS 274
           DLE LP ++     C SL EL +DYN +  LP ++ + +  L + S   N +KQLP TM+
Sbjct: 18  DLESLPTSLSDPVFCGSLTELFLDYNSICDLPASLFENLEKLTLFSAVGNELKQLPDTMA 77

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            +  L++L +  N+L ++P ++   + L  MNI  N   +++LP S+  L  LEE+ +  
Sbjct: 78  KMRDLQKLFLQENQLGALPHTIGAFSQLKVMNIVGN--RVKSLPDSVSELSALEEIYLDE 135

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
           NQ+  LP SF  L+ L+ L + +N L   P++I  +    V+    + +E
Sbjct: 136 NQLEGLPSSFVQLTCLQRLEISDNILAHLPKDIGNLSKLRVLNVSGNKLE 185



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/119 (37%), Positives = 67/119 (56%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP+  G+L +L  +DL +N++  +P +   L SL+   L  N +  LP++IG+L 
Sbjct: 337 NQISELPEDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELK 396

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           SLV L L  NQIS +P +L  L  L+ LDL  N  + LP  +  L +L +L V  N  E
Sbjct: 397 SLVDLRLDNNQISDVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKFE 455



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 7/172 (4%)

Query: 73  EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVP 132
           +KL  I++ S+I    ++  ++ N        I+ LP     ++ L    L EN+I  +P
Sbjct: 291 KKLEKIQIGSVICELERRHFQNGNW-------IDQLPSRFSHMTMLKEAYLDENQISELP 343

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDL 192
              G L +L+ +DL  N++  LPDS   L SL    L  N +  LP  +  L  L +L L
Sbjct: 344 EDFGRLVNLEFIDLGQNQLRRLPDSFCQLRSLRVCQLSKNLLECLPENIGELKSLVDLRL 403

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            +N +S +P S+G L +L+ L +  N   ELP  + + ++L  L V  N+ +
Sbjct: 404 DNNQISDVPSSLGELSNLQSLDLFHNLFTELPACLSKLTNLVRLDVYENKFE 455


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 85/280 (30%), Positives = 158/280 (56%), Gaps = 8/280 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  L  L +L  LD+  NN+  + D I    SL+ L++ +N +++LP
Sbjct: 210 KEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L+VD N+L  LP+++G +  +E L   +N I+ LP+++  L  +R    
Sbjct: 270 ESIGALKKLTTLKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +    +   + + +N   L +LP  +G+++ L+ +++S+N++R LP SF
Sbjct: 330 DHNFLTQLPPEIGTWKSATVLFLHSN--KLESLPEEMGDMQKLKVINLSDNRLRNLPFSF 387

Query: 345 RMLSRLRVLRVQEN---PLEVPPRNIVEMGAQAVV--QYM 379
             L +L  + + +N   PL +P +   +   Q VV   YM
Sbjct: 388 TRLQQLTAMWLSDNQSKPL-IPLQKETDQDTQKVVLTNYM 426



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/337 (31%), Positives = 163/337 (48%), Gaps = 29/337 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN +  ++ C C  G++    SL     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLLVRLVPCRCLRGEEETVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D N+L  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEM 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +   +S   SL++L +S N ++ +PES+     L  + +  N   L  LP SIG L  +E
Sbjct: 245 VEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDEN--QLMYLPDSIGGLTAIE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           +LD S N+I  LP S   L ++R      N L ++PP
Sbjct: 303 DLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPP 339



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 130/238 (54%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  N++  +P  +G+L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN +  LP+SIG+L  L  L V+ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKVDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +++ +L   +N ++ALP ++G +  +   +  +N + QLP  + +  S   L
Sbjct: 291 LPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LES+PE +     L  +N+ +N   LR LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLESLPEEMGDMQKLKVINLSDNR--LRNLPFSFTRLQQLTAMWLSDNQSKPL 406



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 72/149 (48%), Gaps = 26/149 (17%)

Query: 220 LEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LE++P  I     +L EL +D N+++ LP+ +    +L  LS+  N++  LP ++++L +
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTILPASIANLIN 93

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELDVS N ++  PE+                         I N ++L  ++ S N I 
Sbjct: 94  LRELDVSKNGIQEFPEN-------------------------IKNCKVLTIVEASVNPIS 128

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPD F  L  L  L + +  L+  P N 
Sbjct: 129 KLPDGFSQLLNLTQLYLNDAFLDFLPANF 157



 Score = 41.2 bits (95), Expect = 0.98,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 3/109 (2%)

Query: 278 SLRELDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           ++  LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N 
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDND 80

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           + +LP S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 88/263 (33%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IGKL +L  LDL +NR+  +P  IG L +L+ L L +N++  LP   G L +L  L
Sbjct: 9   LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQEL 68

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ++ LP  + +L  L+ L+L SN L++L   I  L +L+ L +  N L  LP  I
Sbjct: 69  NLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEI 128

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L  L +  N+L  LP  +GK+  L  L++  N +  L   +  L +L++L++  N
Sbjct: 129 GKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++ + +     L  +++   +  L  LP+ IG L+ L+EL++ NNQ+  LP     L
Sbjct: 189 QLTTLSKEIEQLKNLQTLSLS--YNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQL 246

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L + +N L   P+ I ++
Sbjct: 247 QNLQTLSLYKNRLMTFPKEIGQL 269



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IGKL +L +L LS N++  +P   G L +L++L+L  N++  LP  IG
Sbjct: 24  LYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIG 83

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L+ NQ++ L   + +L  L+ L+L  N L++LP  IG L +L  L +  N 
Sbjct: 84  QLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQ 143

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP  IG+  +L  L +  N+L  L   +GK+  L+ L++  N +  L   +  L +L
Sbjct: 144 LTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 203

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           + L +S+N L  +P+ +     L ++N+ NN   L ALP  IG L+ L+ L +  N++  
Sbjct: 204 QTLSLSYNRLVILPKEIGQLQNLQELNLWNN--QLTALPIEIGQLQNLQTLSLYKNRLMT 261

Query: 340 LPDSFRMLSRLRVL 353
            P     L  L+ L
Sbjct: 262 FPKEIGQLKNLQTL 275



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 71/215 (33%), Positives = 119/215 (55%), Gaps = 3/215 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN +  LP  IG+L +L +L+L  N++  +   I  L +L+ L+L  N++  LP  IG
Sbjct: 70  LSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIG 129

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L  NQ++ LP+ + +L  L  L+L  N L++L   IG L +L+ L + +N 
Sbjct: 130 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQ 189

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  L   I Q  +L+ L + YNRL  LP+ +G++  L+ L++  N +  LP  +  L +L
Sbjct: 190 LTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNL 249

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIG--NNFA 312
           + L +  N L + P+ +     L  + +G  N F+
Sbjct: 250 QTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHNQFS 284



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 64/181 (35%), Positives = 101/181 (55%), Gaps = 3/181 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  + LNL +   + +  LP  IGKL +L +L+LS+N++  +P  IG L +L  L
Sbjct: 104 EIEQLKNLQTLNLSD---NQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTL 160

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++  L   IG L +L  L+L  NQ++ L   + +L  L+ L L  N L  LP  I
Sbjct: 161 NLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEI 220

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L++L +  N L  LP  IGQ  +L+ L +  NRL   P+ +G++  L+ L +  +
Sbjct: 221 GQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGH 280

Query: 265 N 265
           N
Sbjct: 281 N 281


>gi|124002081|ref|ZP_01686935.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992547|gb|EAY31892.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 529

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 159/281 (56%), Gaps = 27/281 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG-----------------------GLS 139
           + ++ LPD+IGKL  L  L++S N++  +P +IG                       GL 
Sbjct: 211 NELKALPDAIGKLKKLQVLEISRNQLACLPTSIGQLQQLEQLDLSSNQLSQLPAELKGLE 270

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L++L+L  N++ +LP +IG L  L  L+L  N ++ALP  + +L  L+ L++  N L++
Sbjct: 271 NLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQRLNIADNRLTA 330

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP+ IG L  L +L +E N++  LP +IGQ S + E+R+++N +  LP  +G ++  + L
Sbjct: 331 LPEQIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGNLYCRQ-L 389

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +  N +  LP ++  L  L  L++S+N L  +P ++   T L+ +N+ +N   L  LP 
Sbjct: 390 DLSSNRLTTLPLSIGGLQCL-SLNLSYNALSYLPLTIGQWTDLMMLNLSSN--QLSYLPS 446

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           +IG +E L++LD+S+N +  LP +   L  LR L +  N L
Sbjct: 447 TIGEMENLQDLDLSDNALSYLPATMGNLKSLRKLNLSGNQL 487



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/302 (33%), Positives = 165/302 (54%), Gaps = 21/302 (6%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           D++  LP  + +LS+L  L+L  N++  +P  +  L  L+ L L  N+I  L  +IG L 
Sbjct: 73  DDLTALPPEVLQLSNLRQLNLGYNKLTTIPPELNQLKYLQALSLVHNQITSLSPAIGQLK 132

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+L  N++  LP  L  L  L+ LDL  N+L   P+ IG L++L++L +E N L  
Sbjct: 133 HLQELNLWSNRLRDLPPELGNLKSLQLLDLVDNHLEVFPEGIGKLLNLQQLNLEHNRLAV 192

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP T+G  + L +L +  N LKALP+A+GK+  L+VL +  N +  LPT++  L  L +L
Sbjct: 193 LPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTSIGQLQQLEQL 252

Query: 283 DVSFNELESVPESLCFATTLVKMNI-GNNFADL--------------------RALPRSI 321
           D+S N+L  +P  L     L ++N+  N  A L                     ALP +I
Sbjct: 253 DLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTI 312

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           G L+ L+ L+I++N++  LP+   ML++L  L+++ N +   P +I ++   A ++   +
Sbjct: 313 GQLQNLQRLNIADNRLTALPEQIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHN 372

Query: 382 LV 383
           L+
Sbjct: 373 LI 374



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 99/283 (34%), Positives = 163/283 (57%), Gaps = 8/283 (2%)

Query: 86  VSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           +   K  ++LNL  N+L D    LP  +G L SL  LDL +N +   P  IG L +L++L
Sbjct: 128 IGQLKHLQELNLWSNRLRD----LPPELGNLKSLQLLDLVDNHLEVFPEGIGKLLNLQQL 183

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+  LP ++G+L  L  L+L  N++ ALP A+ +L +L+ L++  N L+ LP SI
Sbjct: 184 NLEHNRLAVLPKTVGNLTQLEKLELGNNELKALPDAIGKLKKLQVLEISRNQLACLPTSI 243

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L  L++L + +N L +LP  +    +L++L + YN+L  LP  +G++  L+ L++  N
Sbjct: 244 GQLQQLEQLDLSSNQLSQLPAELKGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNN 303

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LPTT+  L +L+ L+++ N L ++PE +   T L+++ + NN  ++  LP SIG L
Sbjct: 304 LLTALPTTIGQLQNLQRLNIADNRLTALPEQIGMLTKLIELKLENN--EITRLPPSIGQL 361

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             + E+ + +N I  LP     L   R L +  N L   P +I
Sbjct: 362 SHVAEIRLEHNLITDLPTEIGNL-YCRQLDLSSNRLTTLPLSI 403



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 151/284 (53%), Gaps = 31/284 (10%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           KG  +L   N + + +  LP +IG+L  L +L+L  N + A+P TIG L +L++L++  N
Sbjct: 267 KGLENLQQLNLMYNQLAQLPTTIGQLKQLQNLNLWNNLLTALPTTIGQLQNLQRLNIADN 326

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           R+  LP+ IG L  L+ L L  N+I+ LP ++ +L  + E+ L  N ++ LP  IG+L  
Sbjct: 327 RLTALPEQIGMLTKLIELKLENNEITRLPPSIGQLSHVAEIRLEHNLITDLPTEIGNLYC 386

Query: 210 LKKLIVETNDLEELPHTIG--QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            ++L + +N L  LP +IG  QC SL    + YN L  LP  +G+   L +L++  N + 
Sbjct: 387 -RQLDLSSNRLTTLPLSIGGLQCLSLN---LSYNALSYLPLTIGQWTDLMMLNLSSNQLS 442

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP+T+  + +L++LD+S N L                           LP ++GNL+ L
Sbjct: 443 YLPSTIGEMENLQDLDLSDNALS-------------------------YLPATMGNLKSL 477

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
            +L++S NQ+       + LS L+ L +  NP+    + IV+  
Sbjct: 478 RKLNLSGNQLTAFAFDLQNLSHLKELVLLGNPISTETKAIVKQA 521


>gi|429961718|gb|ELA41263.1| hypothetical protein VICG_01752, partial [Vittaforma corneae ATCC
           50505]
          Length = 342

 Score =  134 bits (338), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/281 (34%), Positives = 152/281 (54%), Gaps = 26/281 (9%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ +E LP  IG+L +L +LDL+ N +  +P+ IG L +L+KL L+ N +  LP  IG L
Sbjct: 28  VNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNLQKLYLNNNNLETLPSEIGKL 87

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L  L L  N +  LP  +  L RL  L L +NNL  L   IG L++L++L +  N++E
Sbjct: 88  TNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILLPKIGGLVNLRELYLSGNNIE 147

Query: 222 ELPH-----------------------TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP                         IG+ ++L+EL ++ N+LK+LP  +  +  LE+
Sbjct: 148 ALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLEI 207

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N  + L T +  L +L+ L    N+L+S+P  +     L  + + NN  +L +LP
Sbjct: 208 LYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSLPAKIGKLKNLETIYLNNN--ELESLP 265

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRML-SRLRVLRVQEN 358
             IG L  L  LD+ NN+++VLPD+ R L S L +L +  N
Sbjct: 266 SEIGELRNLRYLDLRNNKLKVLPDTIRKLFSSLHLLYLTGN 306



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 134/228 (58%), Gaps = 2/228 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+E LP  IG+L  L +L LS N +  +   IGGL +L++L L  N I  LP  IGDL+
Sbjct: 98  NNLETLPSEIGELKRLRNLHLSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLV 157

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++ + PV + +L  L+EL L  N L SLP  I +L +L+ L +  N+ E 
Sbjct: 158 NLRNLHLNNNKLKSFPVVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLEILYLNDNEFEP 217

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L   IG+  +L+ L    N+LK+LP  +GK+  LE + +  N ++ LP+ +  L +LR L
Sbjct: 218 LSTEIGELENLKMLHFRDNKLKSLPAKIGKLKNLETIYLNNNELESLPSEIGELRNLRYL 277

Query: 283 DVSFNELESVPESL--CFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           D+  N+L+ +P+++   F++  +    GN+ +++    R++G  E+ E
Sbjct: 278 DLRNNKLKVLPDTIRKLFSSLHLLYLTGNSISEIGERGRTLGKKELKE 325



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/245 (33%), Positives = 135/245 (55%), Gaps = 2/245 (0%)

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           I  +  +I  L+ L  LDL  N++ +LP  + RLV L+ LDL  NNL +LP  IG L++L
Sbjct: 8   ITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNL 67

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           +KL +  N+LE LP  IG+ ++L++L +  N L+ LP  +G++  L  L +  NN+K L 
Sbjct: 68  QKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILL 127

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L +LREL +S N +E++P  +     +   N+  N   L++ P  IG L  L+EL
Sbjct: 128 PKIGGLVNLRELYLSGNNIEALPSEI--GDLVNLRNLHLNNNKLKSFPVVIGKLTNLQEL 185

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKT 390
            ++ N+++ LP   R L  L +L + +N  E     I E+    ++ +  + ++   AK 
Sbjct: 186 HLNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSLPAKI 245

Query: 391 QPVKQ 395
             +K 
Sbjct: 246 GKLKN 250


>gi|417406386|gb|JAA49853.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1369

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD   NN+  + + I +  +L+ LI+ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q + L+E  +D NRL  +P  +G +  L  L    NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 158/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L    N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  L+ LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD   N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 96/290 (33%), Positives = 166/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 293 NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 352

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ LP    +L  LE+LDL +N L+ +P S  SL SL +L + +N L+ 
Sbjct: 353 NLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKS 412

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 413 LPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLKEL 471

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 472 HVGENQIEMLGAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 529

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q
Sbjct: 530 YSLGKL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKI-KDDEPSQ 577



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 87/322 (27%), Positives = 142/322 (44%), Gaps = 52/322 (16%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L  L +L L
Sbjct: 484 EHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL-HLKFLAL 542

Query: 170 RGNQISA--------------------------------------LP----VALSRLVRL 187
            GN +                                        LP    V +  +V L
Sbjct: 543 EGNPLRTIRREIINKGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLPSESRVNVHSIVTL 602

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVET-----NDLEELPHTIGQCSSL-RELRVDYN 241
           + LD        +PD +    ++K  IV +     N L E+P  I +   +  ++ + +N
Sbjct: 603 KILDYSDKQAVLIPDEV--FDAVKSNIVTSVNFSKNQLCEIPKRIIELKEMVSDVNLSFN 660

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE L    T
Sbjct: 661 KLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPT 720

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
           L  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +  NP  
Sbjct: 721 LETILISNNQVG-SVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFR 779

Query: 362 VPPRNIVEMGAQAVVQYMADLV 383
           VP   I+  G  A+++Y+ D +
Sbjct: 780 VPRAAILMKGTAAILEYLRDRI 801



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 22/252 (8%)

Query: 90  KGTRDL--NLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           KGT+++   LQ+K+ D+     +S+ + +  +    SE+R+      +  + +LK LD  
Sbjct: 557 KGTQEVLKYLQSKIKDDEPSQNNSVTETAMTLP---SESRV-----NVHSIVTLKILDYS 608

Query: 148 ANRIIELPDSIGDLLS---LVYLDLRGNQISALPVALSRLVRLEEL----DLGSNNLSSL 200
             + + +PD + D +    +  ++   NQ+  +P    R++ L+E+    +L  N LS +
Sbjct: 609 DKQAVLIPDEVFDAVKSNIVTSVNFSKNQLCEIP---KRIIELKEMVSDVNLSFNKLSFV 665

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
              + +L  L  L +  N L  LP  +     L+ + + +NR K LPE + +I TLE + 
Sbjct: 666 SLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETIL 725

Query: 261 VRYNNIKQL-PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALP 318
           +  N +  + P  M ++ +L  LD+  N+L  +P  L     L  + + GN F   RA  
Sbjct: 726 ISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAI 785

Query: 319 RSIGNLEMLEEL 330
              G   +LE L
Sbjct: 786 LMKGTAAILEYL 797



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 285 LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 342

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  LP+ F  L  L  L +  N L + P
Sbjct: 343 ILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVP 391


>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 264

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 81/237 (34%), Positives = 139/237 (58%), Gaps = 2/237 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  IG+L +L +LDLS N++  +   I  L +L+ L L  +++  LP  I  L 
Sbjct: 12  NQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLTTLPKEIKQLK 71

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  NQ++ LP  + +L  L+ L LG N L+ LP  IG L +L+ L + +N L+ 
Sbjct: 72  NLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQTLDLSSNQLKT 131

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           L   I Q  +L+ L +  N+L  LP+ + ++  L+ L + YN +  LP  +  L +L+EL
Sbjct: 132 LSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQEL 191

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N+L ++P  +    +L  +++GNN   L+ LP+ IG L+ L+ L ++NNQ+ +
Sbjct: 192 NLWNNQLTTLPIEIGQLQSLKSLDLGNN--QLKILPKEIGQLKNLQTLYLNNNQLAI 246



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 139/251 (55%), Gaps = 2/251 (0%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           + +L +L L  N+I  +P  IG L +L+ LDL +N++  L   I  L +L  L L  +Q+
Sbjct: 1   MKNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQL 60

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           + LP  + +L  L+ LDL  N L++LP  I  L +L+ L +  N L  LP  IGQ  +L+
Sbjct: 61  TTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQ 120

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            L +  N+LK L + + ++  L+ L +  N +  LP  +  + +L+ L + +N+L ++P+
Sbjct: 121 TLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPK 180

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +     L ++N+ NN   L  LP  IG L+ L+ LD+ NNQ+++LP     L  L+ L 
Sbjct: 181 EIGQLKNLQELNLWNN--QLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQLKNLQTLY 238

Query: 355 VQENPLEVPPR 365
           +  N L +  +
Sbjct: 239 LNNNQLAIEEK 249



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 78/233 (33%), Positives = 130/233 (55%), Gaps = 2/233 (0%)

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           + +L+ L L+ N+I  +P  IG L +L  LDL  NQ+  L   + +L  L+ L LG + L
Sbjct: 1   MKNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQL 60

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           ++LP  I  L +L+ L +  N L  LP  I Q  +L+ L + YNRL  LP+ +G++  L+
Sbjct: 61  TTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNLQ 120

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            L +  N +K L   +  L +L+ L +  N+L ++P+ +     L  + +G  +  L AL
Sbjct: 121 TLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLG--YNQLTAL 178

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P+ IG L+ L+EL++ NNQ+  LP     L  L+ L +  N L++ P+ I ++
Sbjct: 179 PKEIGQLKNLQELNLWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQL 231


>gi|391333506|ref|XP_003741154.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Metaseiulus occidentalis]
          Length = 608

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 102/290 (35%), Positives = 161/290 (55%), Gaps = 9/290 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L  L  L+L +N I  +P  +  LS+L +L+L  N++ ELPD +  L  L  L
Sbjct: 102 LPPEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCLCHLKDLRVL 161

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N+I ++   ++ L+ L++LDL  N L  LPD+   L   KK+ +  N LE LP  +
Sbjct: 162 ALHHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANNCLEALPADM 221

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L  L +  N L  LPEA+G+   LE L  R+N ++ LP   S  + L+EL VSFN
Sbjct: 222 DSMIQLVLLDLSNNCLTKLPEAIGRCGHLEQLVARHNRLETLP-PFSRENHLKELSVSFN 280

Query: 288 ELESVPESLCFATTLVK-MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            ++      C A  ++K +++ +N   L +LP  I NL+ LE LDI NN++++LP+S   
Sbjct: 281 AIKEFNVGHCEALVMLKILDLRSN--KLASLPEEIANLQSLERLDIGNNELKILPNSLGA 338

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQK 396
           L+ +  L V+ NPL    ++I+  G   +++Y+ D +     K  P++QK
Sbjct: 339 LNHINSLLVEGNPLRSIRQDILRRGTVYLMKYLRDRL-----KESPMQQK 383



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 69/243 (28%), Positives = 130/243 (53%), Gaps = 11/243 (4%)

Query: 125 ENR-IVAVPATIGGLSSL-----KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           +NR    +P+ +  L++L     K +D+  +R  +  D     + L  L L  N+++ LP
Sbjct: 46  QNRGFTELPSVVCNLNNLSEQEVKSIDVTLDRASQ--DDWWTQMPLSKLFLGSNRLTTLP 103

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             +++L  L  L+L  NN+S LP  + SL +L +L +  N + ELP  +     LR L +
Sbjct: 104 PEIAQLEHLTILELQDNNISKLPQQMESLSNLIRLNLSHNKMTELPDCLCHLKDLRVLAL 163

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
            +N +K++ + +  + +L+ L + +N +K+LP   + LS  ++++++ N LE++P  +  
Sbjct: 164 HHNEIKSVSDNINSLLSLDDLDLSHNKLKELPDAFTFLSRTKKINLANNCLEALPADMDS 223

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              LV +++ NN   L  LP +IG    LE+L   +N++  LP  F   + L+ L V  N
Sbjct: 224 MIQLVLLDLSNNC--LTKLPEAIGRCGHLEQLVARHNRLETLP-PFSRENHLKELSVSFN 280

Query: 359 PLE 361
            ++
Sbjct: 281 AIK 283



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/322 (22%), Positives = 146/322 (45%), Gaps = 50/322 (15%)

Query: 111 SIGKLSSLVSL---DLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           ++G   +LV L   DL  N++ ++P  I  L SL++LD+  N +  LP+S+G L  +  L
Sbjct: 286 NVGHCEALVMLKILDLRSNKLASLPEEIANLQSLERLDIGNNELKILPNSLGALNHINSL 345

Query: 168 DLRGNQISAL--------PVALSRLVR--LEE---------------------------- 189
            + GN + ++         V L + +R  L+E                            
Sbjct: 346 LVEGNPLRSIRQDILRRGTVYLMKYLRDRLKESPMQQKIRKSRGGDGQELVDSVDRFTLK 405

Query: 190 ----LDLGSNNLSSLPDSIGSLI---SLKKLIVETNDLEELPHTIGQ-CSSLRELRVDYN 241
               LD  +  LS+L + +  +     + +L++  N    +P T+ +    L EL   +N
Sbjct: 406 SSKTLDFSNKALSTLDEKVIDMACEDKINQLVLTRNIFVTVPDTLERLAQQLTELDFSFN 465

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +L ++P  + +   L+ ++++ N +  LP  +S L ++REL++S N    +P+ + +   
Sbjct: 466 KLTSIPPFLSQAKHLQYMNLQSNQLSDLPPELSCLENIRELNISQNRFSKIPDCV-YGWK 524

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
             ++ + ++ +       ++  +E L  LD+ NN I  +P     L +++ L++  N   
Sbjct: 525 RFEILLASDNSLTSIDVENLAKIETLATLDLRNNSISQVPPELGNLIQIKSLQLDGNLFR 584

Query: 362 VPPRNIVEMGAQAVVQYMADLV 383
            P   I+    Q ++ Y+ D +
Sbjct: 585 NPRPAILAKSTQDILAYLRDRI 606



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 98/220 (44%), Gaps = 28/220 (12%)

Query: 69  GQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           G DG++L        ++  + K ++ L+  NK +  ++     +     +  L L+ N  
Sbjct: 389 GGDGQEL-----VDSVDRFTLKSSKTLDFSNKALSTLDEKVIDMACEDKINQLVLTRNIF 443

Query: 129 VAVPATIGGLSS-LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           V VP T+  L+  L +LD   N++  +P  +     L Y++L+ NQ+S LP  LS L  +
Sbjct: 444 VTVPDTLERLAQQLTELDFSFNKLTSIPPFLSQAKHLQYMNLQSNQLSDLPPELSCLENI 503

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
            EL++  N  S +PD +      + L+   N L                 +D        
Sbjct: 504 RELNISQNRFSKIPDCVYGWKRFEILLASDNSLTS---------------IDV------- 541

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           E + KI TL  L +R N+I Q+P  + +L  ++ L +  N
Sbjct: 542 ENLAKIETLATLDLRNNSISQVPPELGNLIQIKSLQLDGN 581


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 142/277 (51%), Gaps = 5/277 (1%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L+L N+ + +I   P+ +  ++ L +LDLS N++ ++P  IG L  L +L++HAN 
Sbjct: 14  GRLTLDLTNQGLTSI---PEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLEVHANM 70

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LP +I  L  L +L +  N+++ LP  + +L +L  L +  N L+ +P  +  L SL
Sbjct: 71  LTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSL 130

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           ++L V  N L   P  + +   LR+L +  N+L  +P  V  +  LEVL V  N +   P
Sbjct: 131 EELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFP 190

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L  LREL++  N+L  VP  +C    L  +N GNN   L   P  +  L+ L +L
Sbjct: 191 PGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNN--KLSTFPPGVEKLQKLRDL 248

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            I +NQ+  +P     L  L  L V  N L   P  +
Sbjct: 249 YIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGV 285



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 79/265 (29%), Positives = 138/265 (52%), Gaps = 2/265 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +  L +L  L +  N++   P  +  L  L++L+++ N++ E+P  +  L +L  L
Sbjct: 166 VPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVL 225

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +   N++S  P  + +L +L +L +  N L+ +P  + SL +L+ L V  N L   P  +
Sbjct: 226 NFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGV 285

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   LREL +  N+L  +P  V  +  LEVLSV  N I++LP  ++ L+ L+ L V   
Sbjct: 286 EKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNC 345

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + +  P  +    TL K+  G    D+  +P  +GNL+ L  L + NN +R LP +   L
Sbjct: 346 QFDEFPRQMLQLKTLQKLYAGGCKFDM--VPDEVGNLQHLWFLAVENNLLRTLPSTMSHL 403

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGA 372
             LRV+++  N  +  P  + E+ A
Sbjct: 404 HNLRVIQLWNNKFDTVPEVLCELPA 428



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 27/285 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            P  + KL  L  L + +N++  VP+ +  L +L+ L ++ N++   P  +  L  L  L
Sbjct: 235 FPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLREL 294

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ++ +P  +  L  LE L +G N +  LPD +  L  LK L V     +E P  +
Sbjct: 295 YIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQM 354

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L++L     +   +P+ VG +  L  L+V  N ++ LP+TMS L +LR + +  N
Sbjct: 355 LQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLLRTLPSTMSHLHNLRVIQLWNN 414

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           + ++VPE LC                          L  +E+L I NN I  LP      
Sbjct: 415 KFDTVPEVLC-------------------------ELPAMEKLVIRNNNITRLPTVLHRA 449

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
            +LR L +  NPL  PP+++ + G  A++ ++    EK  A  QP
Sbjct: 450 DKLRDLDISGNPLTYPPQDVCKQGTGAIMAFLKQEAEK--ASRQP 492



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/285 (30%), Positives = 142/285 (49%), Gaps = 6/285 (2%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           V+ +K T     +NKL +    LP  I KL  L  L + +N++  VP  +  L SL++LD
Sbjct: 79  VTLQKLTHLYVYRNKLAN----LPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELD 134

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           +  N++   P  +  L  L  L +  NQ++ +P  +  L  LE L +G+N LS+ P  + 
Sbjct: 135 VSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVE 194

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L  L++L +  N L E+P  +    +L  L    N+L   P  V K+  L  L +  N 
Sbjct: 195 KLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQ 254

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           + ++P+ + SL +L  L V  N+L + P  +     L ++ I NN   L  +P  + +L 
Sbjct: 255 LTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNN--QLTEVPSGVCSLP 312

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LE L +  N IR LPD    L+RL+ L V     +  PR ++++
Sbjct: 313 NLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQL 357


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 78/232 (33%), Positives = 129/232 (55%), Gaps = 2/232 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N++  +   I  L +L+KL L  N++  L   IG L +L  L
Sbjct: 58  LPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSL 117

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ++  P  + +L  L+EL L +N L++ P  IG L  L+ L +  N L  +P+ I
Sbjct: 118 FLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEI 177

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+   L+EL +D N+L  +P+ +G++  L+VL + YN  K +P     L +L+ L +  N
Sbjct: 178 GKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDAN 237

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +L ++P+ +     L  +N+  N   L  +P+ IG L+ L+ L + NNQ  +
Sbjct: 238 QLTALPKEIGKLKNLKMLNLDAN--QLTTIPKEIGQLQNLQTLYLRNNQFSI 287



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 136/247 (55%), Gaps = 2/247 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS+N+++ +P  I  L +L++L L+ N++   P  I  L SL  L L  NQ++ LPV 
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVE 61

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L+EL+L +N L ++   I  L +L+KL ++ N L  L   IG+  +L+ L +  
Sbjct: 62  IGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSN 121

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L   P+ +GK+  L+ L +  N +   P  +  L  L+ L +  N+L ++P  +    
Sbjct: 122 NQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQ 181

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L ++N+  N   L  +P+ IG L+ L+ L +S NQ + +P  F  L  L++L +  N L
Sbjct: 182 KLQELNLDVN--QLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQL 239

Query: 361 EVPPRNI 367
              P+ I
Sbjct: 240 TALPKEI 246



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/263 (30%), Positives = 137/263 (52%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L+ N++   P  I  L SL KL L  N++  LP  IG L +L  L
Sbjct: 12  LPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQEL 71

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  NQ+  +   + +L  L++L L +N L++L   IG L +LK L +  N L   P  I
Sbjct: 72  NLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEI 131

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+  +L+EL +  N+L   P+ +GK+  L+ L +  N +  +P  +  L  L+EL++  N
Sbjct: 132 GKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVN 191

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L  + +   +   + +P   G L+ L+ L +  NQ+  LP     L
Sbjct: 192 QLTTIPKEIGQLQNLQVLFLS--YNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKL 249

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L++L +  N L   P+ I ++
Sbjct: 250 KNLKMLNLDANQLTTIPKEIGQL 272


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   +L  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+  ++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVTNLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     L  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 158/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  L  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V  + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVTNLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL +L  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L   N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVTNLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|24650336|ref|NP_733156.1| scribbled, isoform C [Drosophila melanogaster]
 gi|23172364|gb|AAN14078.1| scribbled, isoform C [Drosophila melanogaster]
          Length = 1247

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQN--RLQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|6850952|emb|CAB71137.1| vartul-2 protein [Drosophila melanogaster]
          Length = 1247

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQN--RLQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  121 bits (304), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           K   R +   NK   ++  +P+ I + S +L  L L  N I  +P     L  L+KL L 
Sbjct: 9   KGCNRQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLS 68

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
            N I  LP  I +  +LV LD+  N I  +P  +  L  L+  D  SN +  LP     L
Sbjct: 69  DNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQL 128

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L  L +    L  LP   G  + L  L +  N LK LPE + ++  L+ L +  N I+
Sbjct: 129 KNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE 188

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L  L EL +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L
Sbjct: 189 DLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSEN--RLEELPNEISGLVSL 246

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            +LD++ N +  LPD    LSRL +L++ +N L+
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQ 280



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK+L L AN I +LP +   L  L  L L  N+I  LP  +     L ELD+  N++  
Sbjct: 38  TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPD 97

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +PD I  L SL+     +N + +LP    Q  +L  L ++   L  LP   G +  LE L
Sbjct: 98  IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL 157

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +K LP T+S L+ L+ LD+  NE+E +P  L +   L ++ + +N   L+ LP 
Sbjct: 158 ELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHN--QLQRLPP 215

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +G L  L  LD+S N++  LP+    L  L  L + +N LE  P  I ++
Sbjct: 216 ELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKL 266


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD   NN+  + + I +  +L+ LI+ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q + L+E  +D NRL  +P  +G +  L  L    NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 88/295 (29%), Positives = 158/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L    N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  L+ LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD   N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|260798524|ref|XP_002594250.1| hypothetical protein BRAFLDRAFT_164586 [Branchiostoma floridae]
 gi|229279483|gb|EEN50261.1| hypothetical protein BRAFLDRAFT_164586 [Branchiostoma floridae]
          Length = 871

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 149/275 (54%), Gaps = 5/275 (1%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           ++ L++  +  +P  +     ++ L L  NR++ LP +   L  L  L L  N +SA P 
Sbjct: 8   AVRLTDRSLSRIPDDVLEKEEVEHLFLSRNRLVVLPSNFTRLGCLTRLYLDNNCLSAFPS 67

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
            L  L  LEEL L  NN+ SLP+ I     ++ L+V  N L  LP +IG  S L+   V 
Sbjct: 68  ELFALSELEELSLADNNIDSLPEQISIFRKMETLLVFGNMLHSLPSSIGSLSLLKSFDVH 127

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCF 298
            N LK LP + G++  L+ L +  N  +++P  +  +  SL+ L+V+ N+L  +PE++  
Sbjct: 128 RNHLKELPASFGQLQNLKNLYLSQNQFEEVPPVVLDVGDSLQVLEVAMNKLRHLPEAIDR 187

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF-RMLSRLRVLRVQE 357
              + +++ G N   + ++P+++ NL  LE L + +N I+ LPD+F ++ S L+ L    
Sbjct: 188 LKVIKRIDAGEN--KIASVPKTMCNLSKLEWLSVMDNCIQELPDTFGQLASSLKYLSTTN 245

Query: 358 NPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
           NPL  PP  + E G QA+++Y  +L   R A  QP
Sbjct: 246 NPLVQPPYEVCEQGIQAILKYQEELQRCR-AVVQP 279



 Score = 81.6 bits (200), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 62/196 (31%), Positives = 96/196 (48%), Gaps = 23/196 (11%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI+ LP+ I     + +L +  N + ++P++IG LS LK  D+H N + ELP S G L 
Sbjct: 83  NNIDSLPEQISIFRKMETLLVFGNMLHSLPSSIGSLSLLKSFDVHRNHLKELPASFGQLQ 142

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQ   +P  +        LD+G               SL+ L V  N L  
Sbjct: 143 NLKNLYLSQNQFEEVPPVV--------LDVGD--------------SLQVLEVAMNKLRH 180

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL-SSLRE 281
           LP  I +   ++ +    N++ ++P+ +  +  LE LSV  N I++LP T   L SSL+ 
Sbjct: 181 LPEAIDRLKVIKRIDAGENKIASVPKTMCNLSKLEWLSVMDNCIQELPDTFGQLASSLKY 240

Query: 282 LDVSFNELESVPESLC 297
           L  + N L   P  +C
Sbjct: 241 LSTTNNPLVQPPYEVC 256



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 1/78 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           M+ +  LP++I +L  +  +D  EN+I +VP T+  LS L+ L +  N I ELPD+ G L
Sbjct: 175 MNKLRHLPEAIDRLKVIKRIDAGENKIASVPKTMCNLSKLEWLSVMDNCIQELPDTFGQL 234

Query: 162 L-SLVYLDLRGNQISALP 178
             SL YL    N +   P
Sbjct: 235 ASSLKYLSTTNNPLVQPP 252


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 163/328 (49%), Gaps = 51/328 (15%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LDLS N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIG---------------QC--------SSL 233
           L  LP++IG+L +LK L ++ N L E+P  +G               +C        +SL
Sbjct: 186 LYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSL 245

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            +L V  N L+ LP+ +GK+  L +L V  N + QL  ++    SL EL ++ N+L+S+P
Sbjct: 246 TDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLP 305

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +S+     L  +N   N   L +LP+ +G    L    + +N++  +P      + L VL
Sbjct: 306 KSIGKLKKLNNLNADRN--KLTSLPKEVGGCCSLNVFSVRDNRLSRIPSEISQATELHVL 363

Query: 354 RVQENPLEVPPRNIVEMGAQAVVQYMAD 381
            V  N L   P ++  +  +A+  +++D
Sbjct: 364 DVAGNRLTYLPISLTTLRLKAL--WLSD 389



 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N +  LP++IG L +L
Sbjct: 140 LQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ +P  +  L  L  LD+  N L  LP+ I  L SL  L+V  N L+ LP
Sbjct: 200 KDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+VD N+L  L +++G   +L  L +  N ++ LP ++  L  L  L+ 
Sbjct: 260 DGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L   ++ +N   L  +P  I     L  LD++ N++  LP S 
Sbjct: 320 DRNKLTSLPKEVGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPISL 377

Query: 345 RMLSRLRVLRVQEN 358
             L RL+ L + +N
Sbjct: 378 TTL-RLKALWLSDN 390



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 129/232 (55%), Gaps = 3/232 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           + +LP+S+ +L  L  LDL  N +  +P TIG L +LK L L  N++ E+P  +G+L +L
Sbjct: 163 LTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNL 222

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           + LD+  N++  LP  +S L  L +L +  N L  LPD IG L  L  L V+ N L +L 
Sbjct: 223 LCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLT 282

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG C SL EL +  N+L++LP+++GK+  L  L+   N +  LP  +    SL    V
Sbjct: 283 DSIGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPKEVGGCCSLNVFSV 342

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
             N L  +P  +  AT L  +++  N   L  LP S+  L  L+ L +S+NQ
Sbjct: 343 RDNRLSRIPSEISQATELHVLDVAGN--RLTYLPISLTTLR-LKALWLSDNQ 391



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 134/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L  L  L LS+N I  +P  I     L +LDL  N I E+P+SI    +L   
Sbjct: 51  LPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L +LP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N L  LPE +G +  L+ L +  N + ++P  + +L +L  LDVS N
Sbjct: 171 AQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE +PE +   T+L  + +  N   L+ LP  IG L  L  L +  N++  L DS    
Sbjct: 231 KLECLPEEISGLTSLTDLLVSQNL--LQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  L + EN L+  P++I
Sbjct: 289 ESLTELVLTENQLQSLPKSI 308



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 136/250 (54%), Gaps = 5/250 (2%)

Query: 120 SLDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           S+D     + AVP  I   S SL++L L AN++ ELP     L+ L  L L  N+I  LP
Sbjct: 16  SIDKRHCSLAAVPEEIYRYSRSLEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLP 75

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             ++  ++L ELDL  N++  +P+SI    +L+      N L  LP +  +  +L  L V
Sbjct: 76  PEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSV 135

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           +   L+ALPE +G ++ L  L +R N +  LP +++ L  L ELD+  NEL  +PE++  
Sbjct: 136 NDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGA 195

Query: 299 ATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
              L  + + GN  A++   P+ +GNL+ L  LD+S N++  LP+    L+ L  L V +
Sbjct: 196 LFNLKDLWLDGNQLAEI---PQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQ 252

Query: 358 NPLEVPPRNI 367
           N L+V P  I
Sbjct: 253 NLLQVLPDGI 262


>gi|260793210|ref|XP_002591605.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
 gi|229276814|gb|EEN47616.1| hypothetical protein BRAFLDRAFT_80701 [Branchiostoma floridae]
          Length = 1573

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/269 (31%), Positives = 149/269 (55%), Gaps = 2/269 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LP  I +L  L  LD+  N I  +PA +G L+++K L+L   ++  LP  IG+L  
Sbjct: 172 NLHTLPLEIWRLIQLRWLDVRFNPIQMLPAGVGQLTNIKHLNLSYCKLRILPPEIGNLTQ 231

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L +LDL GNQ+  LP  +  L  ++ L L S N+ +LP  +G L  L+ L + +N+L+ L
Sbjct: 232 LEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWLGLSSNNLQTL 291

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IGQ ++++   +   +L+ LP  VG++  LE L +  N ++ LP  +  L+ L+ LD
Sbjct: 292 PSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLTCLKHLD 351

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +S+ +L  +P  +   T L  + +  N   L+ L   + ++  +E  ++S  Q+  LP  
Sbjct: 352 MSYCQLTLLPREVGALTQLECLVMIRN--PLQMLTTDVQHIINIESFNLSQCQLTTLPPE 409

Query: 344 FRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
              L+ LR L +  NPL++ P N+ ++ +
Sbjct: 410 IGRLAHLRWLDLSYNPLQILPPNLGQLSS 438



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/291 (29%), Positives = 150/291 (51%), Gaps = 25/291 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ LP  IG+L+++   DLS  ++  +P  +G L+ L+ L+L  N +  LP  I  L 
Sbjct: 286 NNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPADIRQLT 345

Query: 163 SLVYLDLRGNQISALPVALSRLVRL-----------------------EELDLGSNNLSS 199
            L +LD+   Q++ LP  +  L +L                       E  +L    L++
Sbjct: 346 CLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQCQLTT 405

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP  IG L  L+ L +  N L+ LP  +GQ SS+R L + + +L  LP  +GK+  +E L
Sbjct: 406 LPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSHCKLHTLPRELGKLTQIEWL 465

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            + +N ++ L   +  L++++ LD+S  +L S+P  +   T L  +++ +N   L+ LP 
Sbjct: 466 DLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPEVGKLTQLEWLHLSSN--PLKTLPP 523

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +G L  +  LD+S  ++R LP     L +L+ L +  NPL+  P  I ++
Sbjct: 524 EVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNLSSNPLQALPAQIGQL 574



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/277 (29%), Positives = 148/277 (53%), Gaps = 7/277 (2%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N+  LP  +G+L+ L  L LS N +  +P+ IG L+++K  DL   ++  LP  +G L  
Sbjct: 264 NMHTLPPEVGRLTQLQWLGLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQ 323

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L +L+L  N +  LP  + +L  L+ LD+    L+ LP  +G+L  L+ L++  N L+ L
Sbjct: 324 LEWLELSQNPLQTLPADIRQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQML 383

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
              +    ++    +   +L  LP  +G++  L  L + YN ++ LP  +  LSS+R LD
Sbjct: 384 TTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLD 443

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +S  +L ++P  L   T +  +++  +F  L+ L   +G L  ++ LD+S  ++  +P  
Sbjct: 444 LSHCKLHTLPRELGKLTQIEWLDL--SFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPPE 501

Query: 344 FRMLSRLRVLRVQENPLE-VPPRNIVEMGAQAVVQYM 379
              L++L  L +  NPL+ +PP    E+G  A V ++
Sbjct: 502 VGKLTQLEWLHLSSNPLKTLPP----EVGQLANVTHL 534



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 144/278 (51%), Gaps = 2/278 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ L   +  + ++ S +LS+ ++  +P  IG L+ L+ LDL  N +  LP ++G L S+
Sbjct: 380 LQMLTTDVQHIINIESFNLSQCQLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSI 439

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +LDL   ++  LP  L +L ++E LDL  N L  L   +G L ++K L +    L  +P
Sbjct: 440 RHLDLSHCKLHTLPRELGKLTQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIP 499

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G+ + L  L +  N LK LP  VG++  +  L +    ++ LP  +  L  L+ L++
Sbjct: 500 PEVGKLTQLEWLHLSSNPLKTLPPEVGQLANVTHLDMSECKLRTLPPEVGRLEQLKWLNL 559

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           S N L+++P  +     +  +++ +   +L  LP  IG L  LE L++S+N ++ LP   
Sbjct: 560 SSNPLQALPAQIGQLNNIQNLDLSS--CELTTLPPEIGKLTQLERLNVSDNPLQTLPAEI 617

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADL 382
             L+ +  L++    L  PP  +   G   + QY  +L
Sbjct: 618 VHLTNISHLKISTRTLSKPPAEVCRQGIATIRQYFEEL 655



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 140/281 (49%), Gaps = 26/281 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L+ L  LDL  N++  +P  +  L+++K L LH+  +  LP  +G L  L +L
Sbjct: 222 LPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYLHSCNMHTLPPEVGRLTQLQWL 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  LP  + +L  ++  DL    L +LP  +G L  L+ L +  N L+ LP  I
Sbjct: 282 GLSSNNLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEVGRLTQLEWLELSQNPLQTLPADI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN------------------NIKQ- 268
            Q + L+ L + Y +L  LP  VG +  LE L +  N                  N+ Q 
Sbjct: 342 RQLTCLKHLDMSYCQLTLLPREVGALTQLECLVMIRNPLQMLTTDVQHIINIESFNLSQC 401

Query: 269 ----LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
               LP  +  L+ LR LD+S+N L+ +P +L   +++  +++ +    L  LPR +G L
Sbjct: 402 QLTTLPPEIGRLAHLRWLDLSYNPLQILPPNLGQLSSIRHLDLSH--CKLHTLPRELGKL 459

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE-VPP 364
             +E LD+S N ++VL      L+ ++ L + E  L  +PP
Sbjct: 460 TQIEWLDLSFNPLQVLLAEVGQLTNVKHLDMSECKLHSIPP 500



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 159/326 (48%), Gaps = 39/326 (11%)

Query: 68  VGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENR 127
           V Q  E+L  I+    ++++ KKG +              LP+ + KL +L  L+L++  
Sbjct: 35  VEQLPEELYGIEELEALDLTGKKGIK--------------LPNELTKLQNLKVLNLNDCN 80

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           +  VPA +  L  L+ L L  N  I LPD +  L ++  L L    +  +P  + RL  L
Sbjct: 81  LTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTNMVTVPTVVWRLTHL 140

Query: 188 EELDLGSN-----------------------NLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+LGSN                       NL +LP  I  LI L+ L V  N ++ LP
Sbjct: 141 HTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQLRWLDVRFNPIQMLP 200

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +GQ ++++ L + Y +L+ LP  +G +  LE L +  N ++ LP  +  L++++ L +
Sbjct: 201 AGVGQLTNIKHLNLSYCKLRILPPEIGNLTQLEWLDLCGNQLQTLPGEVRYLTNVKHLYL 260

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
               + ++P  +   T L  + + +N  +L+ LP  IG L  ++  D+S  ++R LP   
Sbjct: 261 HSCNMHTLPPEVGRLTQLQWLGLSSN--NLQTLPSEIGQLTNIKHFDLSLCKLRTLPPEV 318

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L++L  L + +NPL+  P +I ++
Sbjct: 319 GRLTQLEWLELSQNPLQTLPADIRQL 344



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/282 (28%), Positives = 147/282 (52%), Gaps = 9/282 (3%)

Query: 100 KLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           +++D+ EW      +  +L++LD S + +  +P  + G+  L+ LDL   + I+LP+ + 
Sbjct: 9   QMLDSKEWAISE--ERVTLLTLDFSGHYVEQLPEELYGIEELEALDLTGKKGIKLPNELT 66

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L+L    ++ +P  + +L +L+ L L +N    LPD +  L +++ L +   +
Sbjct: 67  KLQNLKVLNLNDCNLTTVPAVVMKLPQLQTLILSNNENIILPDEMSGLTNIRVLKLNKTN 126

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +  +P  + + + L  L +  N L  L   +G +  +E L++   N+  LP  +  L  L
Sbjct: 127 MVTVPTVVWRLTHLHTLELGSNTLNVLNAEIGLLSNMEHLNLSKCNLHTLPLEIWRLIQL 186

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R LDV FN ++ +P  +   T +  +N+  ++  LR LP  IGNL  LE LD+  NQ++ 
Sbjct: 187 RWLDVRFNPIQMLPAGVGQLTNIKHLNL--SYCKLRILPPEIGNLTQLEWLDLCGNQLQT 244

Query: 340 LPDSFRMLSRLRVLRVQE-NPLEVPPRNIVEMGAQAVVQYMA 380
           LP   R L+ ++ L +   N   +PP    E+G    +Q++ 
Sbjct: 245 LPGEVRYLTNVKHLYLHSCNMHTLPP----EVGRLTQLQWLG 282


>gi|301780096|ref|XP_002925464.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387-like [Ailuropoda melanoleuca]
          Length = 869

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 147/291 (50%), Gaps = 28/291 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NI  +P+ I +L+++  L+ S N I  VP  +     + K++L  N+I+  P  +  L 
Sbjct: 437 NNIVRIPEDISRLNNMFILEFSGNIITDVPIEVKNCKKITKVELSHNKIMYFPVGLCALD 496

Query: 163 SLVYLDLRGNQISALPVALS-----------------------RLVRLEELDLGSNNLSS 199
           SL YL+  GN IS +PV +S                        L+ LE LDLG N +  
Sbjct: 497 SLYYLNFNGNYISEIPVDISFSKQLLNLELNKNKLLIFSEHLCSLINLEYLDLGENQIRK 556

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +P SI +++SL  LI+  N  E  P  +    +L+ L +  N+++ +P  +  +  ++ L
Sbjct: 557 IPPSISNMVSLHALILCCNKFEAFPIEVCTLENLQVLDLSINQIQTIPSDICNLKRIQKL 616

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVS---FNELESVPESLCFATTLVKMNIGNNFADLRA 316
           ++  N     PT +  L SL EL++S     +L  +PE L   T L +++I NN   +R 
Sbjct: 617 NIASNQFIYFPTELCQLQSLEELNISQINGRKLTRLPEELSNMTQLKRLDISNN--AIRE 674

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           +PR+IG L  L  L+  NNQI  LP SF  L+ L+ L +  N L V P  I
Sbjct: 675 IPRNIGELRSLVSLNAHNNQISYLPPSFLCLNDLQQLNLSGNNLTVLPNGI 725



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 139/283 (49%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S     R L   N  ++N    P  +  L +L  L L++N++  +P T+  L +LK L
Sbjct: 238 EISQLGNIRQLFFNNNYIEN---FPSGLESLGNLEILSLAKNKLRHIPDTLSSLKNLKVL 294

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  N++   P  +  L  L+ L L GN IS+LP  +  L  LE+L L  N L+ L   I
Sbjct: 295 DLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEIRELKNLEKLLLDHNKLTFLAVEI 354

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L+ +K+L +  N L+ + H I     L+ L +D N LK +PE +     LE LS+ YN
Sbjct: 355 FQLLKMKELQLTDNKLQVISHKIENFKELKILILDKNLLKEIPEKISHCVMLECLSLSYN 414

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  LP  +  L +LR+L V+ N +  +PE +     +  +    N   +  +P  + N 
Sbjct: 415 KLTGLPKNIYKLKNLRKLHVNRNNIVRIPEDISRLNNMFILEFSGNI--ITDVPIEVKNC 472

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + + ++++S+N+I   P     L  L  L    N +   P +I
Sbjct: 473 KKITKVELSHNKIMYFPVGLCALDSLYYLNFNGNYISEIPVDI 515



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/206 (31%), Positives = 107/206 (51%), Gaps = 3/206 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P SI  + SL +L L  N+  A P  +  L +L+ LDL  N+I  +P  I +L 
Sbjct: 552 NQIRKIPPSISNMVSLHALILCCNKFEAFPIEVCTLENLQVLDLSINQIQTIPSDICNLK 611

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN---LSSLPDSIGSLISLKKLIVETND 219
            +  L++  NQ    P  L +L  LEEL++   N   L+ LP+ + ++  LK+L +  N 
Sbjct: 612 RIQKLNIASNQFIYFPTELCQLQSLEELNISQINGRKLTRLPEELSNMTQLKRLDISNNA 671

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P  IG+  SL  L    N++  LP +   ++ L+ L++  NN+  LP  + +L SL
Sbjct: 672 IREIPRNIGELRSLVSLNAHNNQISYLPPSFLCLNDLQQLNLSGNNLTVLPNGIHNLFSL 731

Query: 280 RELDVSFNELESVPESLCFATTLVKM 305
           +E++   N L   P  +C    L  +
Sbjct: 732 KEINFDDNPLLRPPMEICKGKQLYTI 757



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 122/225 (54%), Gaps = 3/225 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS-RLVRLEELDLGSNNLSSLPD 202
           +++ A  + E P  I  +  + YL L  NQI +   A S  L+ LE L L  N LSSLP 
Sbjct: 155 VNIKAKGLQEFPKDILKIKYVKYLYLDKNQIKSFKGADSGDLLGLEILSLQENGLSSLPP 214

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            I  L +L+ L V  N +  +   I Q  ++R+L  + N ++  P  +  +  LE+LS+ 
Sbjct: 215 EIQLLRNLRILNVSHNQISHIAKEISQLGNIRQLFFNNNYIENFPSGLESLGNLEILSLA 274

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N ++ +P T+SSL +L+ LD+ +N+L   P+ LCF   L+ + +  N   + +LP+ I 
Sbjct: 275 KNKLRHIPDTLSSLKNLKVLDLEYNQLTIFPKVLCFLPKLISLILTGNL--ISSLPKEIR 332

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L+ LE+L + +N++  L      L +++ L++ +N L+V    I
Sbjct: 333 ELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTDNKLQVISHKI 377



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 75/271 (27%), Positives = 130/271 (47%), Gaps = 2/271 (0%)

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
           G L  L  L L EN + ++P  I  L +L+ L++  N+I  +   I  L ++  L    N
Sbjct: 194 GDLLGLEILSLQENGLSSLPPEIQLLRNLRILNVSHNQISHIAKEISQLGNIRQLFFNNN 253

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
            I   P  L  L  LE L L  N L  +PD++ SL +LK L +E N L   P  +     
Sbjct: 254 YIENFPSGLESLGNLEILSLAKNKLRHIPDTLSSLKNLKVLDLEYNQLTIFPKVLCFLPK 313

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L  L +  N + +LP+ + ++  LE L + +N +  L   +  L  ++EL ++ N+L+ +
Sbjct: 314 LISLILTGNLISSLPKEIRELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTDNKLQVI 373

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
              +     L  + +  N   L+ +P  I +  MLE L +S N++  LP +   L  LR 
Sbjct: 374 SHKIENFKELKILILDKNL--LKEIPEKISHCVMLECLSLSYNKLTGLPKNIYKLKNLRK 431

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           L V  N +   P +I  +    ++++  +++
Sbjct: 432 LHVNRNNIVRIPEDISRLNNMFILEFSGNII 462



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/260 (27%), Positives = 128/260 (49%), Gaps = 7/260 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I  L +L  L++S N+I  +   I  L ++++L  + N I   P  +  L +L  L
Sbjct: 212 LPPEIQLLRNLRILNVSHNQISHIAKEISQLGNIRQLFFNNNYIENFPSGLESLGNLEIL 271

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++  +P  LS L  L+ LDL  N L+  P  +  L  L  LI+  N +  LP  I
Sbjct: 272 SLAKNKLRHIPDTLSSLKNLKVLDLEYNQLTIFPKVLCFLPKLISLILTGNLISSLPKEI 331

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L +L +D+N+L  L   + ++  ++ L +  N ++ +   + +   L+ L +  N
Sbjct: 332 RELKNLEKLLLDHNKLTFLAVEIFQLLKMKELQLTDNKLQVISHKIENFKELKILILDKN 391

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +PE +     L  +++  N   L  LP++I  L+ L +L ++ N I  +P+    L
Sbjct: 392 LLKEIPEKISHCVMLECLSLSYN--KLTGLPKNIYKLKNLRKLHVNRNNIVRIPEDISRL 449

Query: 348 SRLRVLRVQEN-----PLEV 362
           + + +L    N     P+EV
Sbjct: 450 NNMFILEFSGNIITDVPIEV 469


>gi|395843935|ref|XP_003794726.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein 4
           [Otolemur garnettii]
          Length = 635

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 170/385 (44%), Gaps = 77/385 (20%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K    L L     +++  LP  +  L+ L  + L +N+  A PA +  L  L+ +DL  N
Sbjct: 207 KNLHHLELLGLTGNHLRLLPKEVVNLTKLREIYLGQNQFNAFPAELCVLDQLRTIDLDKN 266

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
           R+  +P+ +G L +L  L +  N +  LP AL R   +  LD+  N L  +P  +  L  
Sbjct: 267 RVAAIPEEVGHLAALHKLYVAHNSLPCLPEALGRCGGMSVLDVSHNLLRGIPHGMAELAE 326

Query: 210 LKKLIVETNDLEELPHTIGQCSSL----------RELRVDYNRLKAL------------- 246
           + ++ +  N L+++PH +   SSL          R LR  + RL  L             
Sbjct: 327 MTEVGLSGNRLDKVPHLLCHWSSLHLLYLSDAGLRRLRGSFRRLVNLRFLDLSRNLLDHC 386

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P  +  +  LEVLS+  N I QLP+ + SLS L+ L ++ NE  S PE +    +L K+ 
Sbjct: 387 PRQLCALRKLEVLSLDDNRIGQLPSELCSLSKLKILGLTGNEFVSFPEEVFSLESLEKLY 446

Query: 307 IG--------------------------NNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           IG                          NN+  L  LP ++G++  LE LD  +N ++VL
Sbjct: 447 IGQDQGSKLTYVPENIGKLQSLKELYIENNY--LETLPAALGSMPHLEVLDCRHNLLKVL 504

Query: 341 PDS-----------------------FRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           PD+                          L  L+VL + ENP+E PP+++   G +AV  
Sbjct: 505 PDAICHAQALREFLLDDNLLTHLPEDLDFLVNLKVLTLSENPMEEPPKDVCAQGTEAVWD 564

Query: 378 YMADLVEKRDAKTQPVKQKKSWVEM 402
           Y   L E R  K Q +K +  W  M
Sbjct: 565 Y---LKESRILKIQTIKVQAWWRGM 586



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 127/271 (46%), Gaps = 6/271 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI--IELPDSIGD 160
           + IE LP  I  L ++V+L L  N++ ++   +G LS L++LDL  + I    LP     
Sbjct: 126 NQIEELPPDIRHLQNIVTLYLHNNKLRSLCPQLGLLSRLQRLDLSHSSIPAAALPVLSRL 185

Query: 161 LLSLVYLDLRGNQISALPVALSR-LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
                        ++ LP  + + L  LE L L  N+L  LP  + +L  L+++ +  N 
Sbjct: 186 RALRELRLYHAG-LAELPAVICKNLHHLELLGLTGNHLRLLPKEVVNLTKLREIYLGQNQ 244

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
               P  +     LR + +D NR+ A+PE VG +  L  L V +N++  LP  +     +
Sbjct: 245 FNAFPAELCVLDQLRTIDLDKNRVAAIPEEVGHLAALHKLYVAHNSLPCLPEALGRCGGM 304

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
             LDVS N L  +P  +     + ++ +  N  D   +P  + +   L  L +S+  +R 
Sbjct: 305 SVLDVSHNLLRGIPHGMAELAEMTEVGLSGNRLD--KVPHLLCHWSSLHLLYLSDAGLRR 362

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  SFR L  LR L +  N L+  PR +  +
Sbjct: 363 LRGSFRRLVNLRFLDLSRNLLDHCPRQLCAL 393



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 112/265 (42%), Gaps = 50/265 (18%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LD S   + A+P  I  L  L++L L  N+I ELP  I  L ++V L L  N++ +L   
Sbjct: 98  LDASSQGLTAIPPEILALQELEELHLENNQIEELPPDIRHLQNIVTLYLHNNKLRSLCPQ 157

Query: 181 LSRLVRLEELDLGSNNL--SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
           L  L RL+ LDL  +++  ++LP         +  +     L ELP  I  C +L     
Sbjct: 158 LGLLSRLQRLDLSHSSIPAAALPVLSRLRALRELRLYHAG-LAELPAVI--CKNL----- 209

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
                          H LE+L +  N+++ LP  + +L+ LRE+ +  N+  + P  LC 
Sbjct: 210 ---------------HHLELLGLTGNHLRLLPKEVVNLTKLREIYLGQNQFNAFPAELCV 254

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                                    L+ L  +D+  N++  +P+    L+ L  L V  N
Sbjct: 255 -------------------------LDQLRTIDLDKNRVAAIPEEVGHLAALHKLYVAHN 289

Query: 359 PLEVPPRNIVEMGAQAVVQYMADLV 383
            L   P  +   G  +V+    +L+
Sbjct: 290 SLPCLPEALGRCGGMSVLDVSHNLL 314



 Score = 52.4 bits (124), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 25/156 (16%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           EV S +    L +       + ++P++IGKL SL  L +  N +  +PA +G +  L+  
Sbjct: 435 EVFSLESLEKLYIGQDQGSKLTYVPENIGKLQSLKELYIENNYLETLPAALGSMPHLE-- 492

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
                                 LD R N +  LP A+     L E  L  N L+ LP+ +
Sbjct: 493 ---------------------VLDCRHNLLKVLPDAICHAQALREFLLDDNLLTHLPEDL 531

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
             L++LK L +  N +EE P  +  C+   E   DY
Sbjct: 532 DFLVNLKVLTLSENPMEEPPKDV--CAQGTEAVWDY 565


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 65/191 (34%), Positives = 123/191 (64%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I KL++L    LS N+I  +P  I  L++L +L L  N+I ++P++I +L 
Sbjct: 159 NQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPEAIANLT 218

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N+I+ +P A++ L+ L +LDL +N ++ +P++I  L +L +LI+  N + +
Sbjct: 219 NLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQ 278

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I + ++L +L +  N++  +PEA+ K+  L  L +R N I Q+P  ++ L++L +L
Sbjct: 279 IPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPEAIAKLTNLTQL 338

Query: 283 DVSFNELESVP 293
           D+S N + ++P
Sbjct: 339 DLSDNSITNIP 349



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 170/302 (56%), Gaps = 5/302 (1%)

Query: 72  GEKLSLIKLASLI---EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRI 128
           GE   L +L SLI   ++ + +   D  L+    +N++ LP  +  L +L  LD+S N +
Sbjct: 33  GEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKTLPLELLGLPNLRKLDISGNPL 92

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLE 188
            ++P  +  +  L++L L   ++ E+PD+I  L +L  LDL  NQI+ +P A+++L  L 
Sbjct: 93  ESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLT 152

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           +L L +N ++ +P++I  L +L + I+  N + ++P  I   ++L +L +  N++  +PE
Sbjct: 153 QLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLTQLILSNNQITQIPE 212

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           A+  +  L  L +  N I Q+P  +++L +L +LD+  N++  +PE++   T L ++ + 
Sbjct: 213 AIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQIPEAIAKLTNLTQLILS 272

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +N   +  +P +I  L  L +LD+ +N+I  +P++   L+ L  L ++ N +   P  I 
Sbjct: 273 DN--KITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQLDLRSNKITQIPEAIA 330

Query: 369 EM 370
           ++
Sbjct: 331 KL 332



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 159/293 (54%), Gaps = 23/293 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P++I KL++L  L L  N+I  +P  I  L++L +  L  N+I ++P++I +L 
Sbjct: 136 NQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLT 195

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  NQI+ +P A++ L  L +LDL +N ++ +P++I +LI+L +L +  N + +
Sbjct: 196 NLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQ 255

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  I + ++L +L +  N++  +PEA+ K+  L  L +  N I Q+P  ++ L++L +L
Sbjct: 256 IPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNLTQL 315

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN--LEMLEELDISNNQIRVL 340
           D+  N++  +PE++   T L ++++ +N         SI N  LEML             
Sbjct: 316 DLRSNKITQIPEAIAKLTNLTQLDLSDN---------SITNIPLEMLNS----------- 355

Query: 341 PDSFRMLSRLRVLRVQEN-PLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQP 392
            D+  +L+ LR +   E  PL      ++  G+      +  L+  +  K QP
Sbjct: 356 KDAKEILNYLRQISTSETRPLHEAKLLLIGQGSVGKTSLIERLIRNKYDKNQP 408



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 129/247 (52%), Gaps = 20/247 (8%)

Query: 142 KKLDLHANRIIELPDSIGDLLSLV-----------------YLD-LRGNQISALPVALSR 183
           ++LDL    + ELP  IG L  L                  YL+ + GN +  LP+ L  
Sbjct: 19  RELDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFVGDRYLEKVSGNNLKTLPLELLG 78

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
           L  L +LD+  N L S+PD +  ++ L++LI+    L E+P  I + ++L +L +  N++
Sbjct: 79  LPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLTQLDLSNNQI 138

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +PEA+ K+  L  L +  N I Q+P  ++ L++L +  +S N++  +PE++   T L 
Sbjct: 139 TQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIANLTNLT 198

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           ++ + NN   +  +P +I NL  L +LD+ NN+I  +P++   L  L  L +  N +   
Sbjct: 199 QLILSNN--QITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNKITQI 256

Query: 364 PRNIVEM 370
           P  I ++
Sbjct: 257 PEAIAKL 263


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 349

 Score =  134 bits (337), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 91/253 (35%), Positives = 136/253 (53%), Gaps = 2/253 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++  P +I KL +L  L+L  N+I ++P  IG L +LK+LDL  N++  LP  IG+L +
Sbjct: 53  NLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKN 112

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  N+IS LP   S    L+ L L  N     PD I  L +L+ L    N L+EL
Sbjct: 113 LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 172

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +GQ  +L  L +  N LK LP +  +  +L+ L++ YN  +  P  + SL  L  L+
Sbjct: 173 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLE 232

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           ++ N+   +PE +     L  + +  N   LR LP+ IG L+ LE L +  NQ+  LP+ 
Sbjct: 233 LTGNQFTFLPEEIGNLDNLNSLFLEAN--RLRQLPKGIGKLQNLERLYLQENQLTTLPEE 290

Query: 344 FRMLSRLRVLRVQ 356
              LS L+ L +Q
Sbjct: 291 IGSLSNLKGLYLQ 303



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 153/310 (49%), Gaps = 9/310 (2%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + I KL +L  L  +   +   P TI  L +LK+L+L  N+I  LP+ IG+L +L  LDL
Sbjct: 36  EEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDL 95

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ+++LPV +  L  LE L L  N +S LP       +LK L +  N   + P  I Q
Sbjct: 96  SDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQ 155

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L  L    N+LK LPE +G++  L +L +  N +K LP++ S   SL+ L++++N  
Sbjct: 156 LQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRF 215

Query: 290 ESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           +  P+ L     L  + + GN F     LP  IGNL+ L  L +  N++R LP     L 
Sbjct: 216 QVFPKELISLKKLETLELTGNQFT---FLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQ 272

Query: 349 RLRVLRVQENPLEVPPRNIVEMG--AQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFS 406
            L  L +QEN L   P  I  +       +Q      EK   K Q +  K    E+ F S
Sbjct: 273 NLERLYLQENQLTTLPEEIGSLSNLKGLYLQGSNFFSEKEKEKIQKLLPK---CEIHFES 329

Query: 407 RSNKRKRNGM 416
            S   K +G+
Sbjct: 330 VSKPSKNSGI 339



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/159 (36%), Positives = 87/159 (54%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
            PD I +L +L  LD SEN++  +P  +G L +L  L L  N +  LP S  +  SL  L
Sbjct: 149 FPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSL 208

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L  N+    P  L  L +LE L+L  N  + LP+ IG+L +L  L +E N L +LP  I
Sbjct: 209 NLNYNRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGI 268

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           G+  +L  L +  N+L  LPE +G +  L+ L ++ +N 
Sbjct: 269 GKLQNLERLYLQENQLTTLPEEIGSLSNLKGLYLQGSNF 307



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L S +L S  + I  L +L++LI    +L+  P TI +  +L+EL +  N++ +LPE +G
Sbjct: 26  LDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIG 85

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +  N +  LP  + +L +L  L +  N +  +P+       L  + +  N 
Sbjct: 86  ELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQN- 144

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              R  P  I  L+ LE LD S NQ++ LP+    L  L +L +  N L+V P +  E 
Sbjct: 145 -KFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEF 202



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 2/138 (1%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +D   LK+  E + K+  LE L     N+K  P T++ L +L+EL++  N++ S+
Sbjct: 21  VRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSL 80

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           PE +     L ++++ +N   L +LP  IGNL+ LE L +  N+I VLP  F +   L++
Sbjct: 81  PEEIGELQNLKELDLSDN--QLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKI 138

Query: 353 LRVQENPLEVPPRNIVEM 370
           L + +N     P  I+++
Sbjct: 139 LYLSQNKFRKFPDEILQL 156



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 34/97 (35%), Positives = 52/97 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +  +  P  +  L  L +L+L+ N+   +P  IG L +L  L L ANR+ +LP  IG L 
Sbjct: 213 NRFQVFPKELISLKKLETLELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQ 272

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +L  L L+ NQ++ LP  +  L  L+ L L  +N  S
Sbjct: 273 NLERLYLQENQLTTLPEEIGSLSNLKGLYLQGSNFFS 309


>gi|321460320|gb|EFX71363.1| hypothetical protein DAPPUDRAFT_60262 [Daphnia pulex]
          Length = 481

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/335 (31%), Positives = 165/335 (49%), Gaps = 32/335 (9%)

Query: 65  MCCVGQDGEKLSLI--KLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSSLVS 120
           MCC+  + + + ++  + +SL +V ++    +  L+   +D   I  LP  +     L  
Sbjct: 1   MCCLKPEEDDVQVLDYEHSSLSDVPAEVFNHERTLEILRLDCNQIADLPRPLFHCHGLKE 60

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP-- 178
           L LS+N I  +P  +  L  L+ LD+  N + E+PD+I  L +L+ LDL  N +  LP  
Sbjct: 61  LWLSDNEIALLPPALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEG 120

Query: 179 ---------------------VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                                    RL +L  L+L  N L++LP S+  L +LK+L +  
Sbjct: 121 ATKLLSLESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQ 180

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           NDL +LP  +G   SL EL VD N+L  LPE VG +  L  L    N +  +  T+    
Sbjct: 181 NDLCDLPEVVGSIPSLTELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCK 240

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           SL +L ++ N L ++PE +   T L  + + +N   L  LP S+G L  LEEL    N++
Sbjct: 241 SLTDLSLTSNNLANLPEEIGDLTLLTVLRVDDN--RLTCLPDSVGRLSNLEELQAGQNRL 298

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             LP S  +L +L  L + EN LE  P   VE+G+
Sbjct: 299 SKLPASIGLLRKLETLMLNENLLEELP---VELGS 330



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 140/253 (55%), Gaps = 2/253 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P ++  L++LK+LD+  N + +LP+ +G + SL
Sbjct: 137 LEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQNDLCDLPEVVGSIPSL 196

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L + GN++  LP  +  L  L  LD   N L  +  +IG   SL  L + +N+L  LP
Sbjct: 197 TELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCKSLTDLSLTSNNLANLP 256

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG  + L  LRVD NRL  LP++VG++  LE L    N + +LP ++  L  L  L +
Sbjct: 257 EEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLPASIGLLRKLETLML 316

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N LE +P  L     L  +++  N   L  LP  +G+L  L  +++S N++  LP SF
Sbjct: 317 NENLLEELPVELGSCQRLTVLSLRKN--RLEHLPPEMGHLSRLRVVNLSCNRLLHLPVSF 374

Query: 345 RMLSRLRVLRVQE 357
             L  L  L + E
Sbjct: 375 LKLPSLSALWLSE 387



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 101/305 (33%), Positives = 146/305 (47%), Gaps = 49/305 (16%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD--- 156
           L DN I  LP ++  L  L  LD+S+N +  VP  I GL +L  LDL  N + +LP+   
Sbjct: 63  LSDNEIALLPPALASLIHLQVLDVSKNSLTEVPDAISGLKALIILDLSVNPLGKLPEGAT 122

Query: 157 --------------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                               + G L  L  L+LR NQ++ LP +++RL  L+ LD+G N+
Sbjct: 123 KLLSLESLNLSDTFLEFLPANFGRLTKLRLLELRENQLATLPKSMARLTALKRLDMGQND 182

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPH-----------------------TIGQCSSL 233
           L  LP+ +GS+ SL +L V+ N L+ LP                        TIG C SL
Sbjct: 183 LCDLPEVVGSIPSLTELWVDGNKLDVLPEFVGHLQNLVHLDASRNCLHGIAPTIGLCKSL 242

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            +L +  N L  LPE +G +  L VL V  N +  LP ++  LS+L EL    N L  +P
Sbjct: 243 TDLSLTSNNLANLPEEIGDLTLLTVLRVDDNRLTCLPDSVGRLSNLEELQAGQNRLSKLP 302

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            S+     L  + +  N   L  LP  +G+ + L  L +  N++  LP     LSRLRV+
Sbjct: 303 ASIGLLRKLETLMLNENL--LEELPVELGSCQRLTVLSLRKNRLEHLPPEMGHLSRLRVV 360

Query: 354 RVQEN 358
            +  N
Sbjct: 361 NLSCN 365


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/275 (32%), Positives = 142/275 (51%), Gaps = 5/275 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +   +LNL+N   +    LP  IG L +L SL L  NR+ ++P  IG L +L+ L
Sbjct: 56  EIGRLQKLEELNLRN---NQFTALPQEIGTLQNLQSLSLESNRLESLPKEIGRLQNLQNL 112

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           DL  NR+  LP  IG L +L  L L  N ++ LP  +  L  L+ L L ++ L++    I
Sbjct: 113 DLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQEI 172

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G+L +LK+L + +  L   P  IGQ   L EL +   +L  L + +G++  L++L +  N
Sbjct: 173 GTLQNLKELSLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLLDLSDN 232

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
                P  +  L  L  L +  N L ++ E +     +VK+N+ NN   LR LP+ IG L
Sbjct: 233 QFTTFPKEIGKLRKLEYLFLEHNRLTTLSEEIVGLQKIVKLNLANN--QLRTLPQGIGQL 290

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
           + L++L++S N     P     L  L+ L ++  P
Sbjct: 291 QSLKDLNLSGNPFTTFPQEIVGLKHLKRLVLENIP 325



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 141/266 (53%), Gaps = 2/266 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  IG+L  L  L+L  N+  A+P  IG L +L+ L L +NR+  LP  IG L 
Sbjct: 48  NQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLESLPKEIGRLQ 107

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N++ +LP  + +L  L+ L L  N+L++LP  IG+L +LK L +  + L  
Sbjct: 108 NLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTLQNLKGLYLSNSRLTT 167

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
               IG   +L+EL +   +L   P+ +G++  LE L +    +  L   +  L +L+ L
Sbjct: 168 FLQEIGTLQNLKELSLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSKEIGQLQNLKLL 227

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N+  + P+ +     L  + + +N   L  L   I  L+ + +L+++NNQ+R LP 
Sbjct: 228 DLSDNQFTTFPKEIGKLRKLEYLFLEHN--RLTTLSEEIVGLQKIVKLNLANNQLRTLPQ 285

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIV 368
               L  L+ L +  NP    P+ IV
Sbjct: 286 GIGQLQSLKDLNLSGNPFTTFPQEIV 311



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 92/169 (54%), Gaps = 2/169 (1%)

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           +++ + + ++ L +E+N L  LP  IG+   L EL +  N+  ALP+ +G +  L+ LS+
Sbjct: 32  EALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSL 91

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N ++ LP  +  L +L+ LD+ +N LES+P+ +     L ++ + +N   L  LP+ I
Sbjct: 92  ESNRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDN--HLTTLPQEI 149

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           G L+ L+ L +SN+++         L  L+ L +    L   P+ I ++
Sbjct: 150 GTLQNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEIGQL 198


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 188/411 (45%), Gaps = 83/411 (20%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI------------------- 158
           L  L L +N +  +PA+I  L +L++LD+  N I E P++I                   
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 159 ---------------------------GDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
                                      G L  L  L+LR NQ+  LP  ++RL +LE LD
Sbjct: 131 PDGFSQLLNLXQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 192 LGSNNLSSLPDS-----------------------IGSLISLKKLIVETNDLEELPHTIG 228
           LGSN  + +P+                        IGSL  L  L V  N++E +   I 
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
            C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L+S+ ELD SFNE
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLASIEELDCSFNE 310

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           +E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+    + 
Sbjct: 311 VEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQ 368

Query: 349 RLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
           +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 369 KLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418


>gi|169828175|ref|YP_001698333.1| protein lap4 [Lysinibacillus sphaericus C3-41]
 gi|168992663|gb|ACA40203.1| Protein lap4 (Protein scribble) (Protein smell-impaired)
           [Lysinibacillus sphaericus C3-41]
          Length = 289

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 149/268 (55%), Gaps = 3/268 (1%)

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
            ++  +  L+L +N +  +P  I  ++S++ L++  N+I +LP  I +L +L  LD   N
Sbjct: 24  SQIKEIKELNLFDNDLRKIPTEIFDMTSMEILNISVNKINKLPAEITNLKNLRMLDAGHN 83

Query: 173 QISALPVALSRLVRLEE-LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
            I  +P  +  LV +E+ L   +N L S+P  IG L  ++ L V  N L ELP  IG  +
Sbjct: 84  HIDLIPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLN 143

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            L ELR+  NRL  LPE + ++  L  L ++ N I  LP  +  L+ LR LD+  N+L+ 
Sbjct: 144 KLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQK 203

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           +P+SL    TL ++N+ +N   L  LP SIG+L+ L ELD+ +N ++ LP+S   +  L 
Sbjct: 204 MPDSLHKCLTLRRLNVRHN--KLSTLPESIGHLKNLLELDVRSNDLKELPESLLAMESLE 261

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L ++ N     P  + E+ A+  + Y+
Sbjct: 262 RLDLRWNHELKIPIWLDELEARGCIVYL 289



 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/264 (32%), Positives = 159/264 (60%), Gaps = 7/264 (2%)

Query: 78  IKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +K   ++E S  K  ++LNL +   +++  +P  I  ++S+  L++S N+I  +PA I  
Sbjct: 15  LKKLPVVEESQIKEIKELNLFD---NDLRKIPTEIFDMTSMEILNISVNKINKLPAEITN 71

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLV-YLDLRGNQISALPVALSRLVRLEELDLGSNN 196
           L +L+ LD   N I  +P  IG L+++  YL    NQ+ ++P  + +L ++  L++  N 
Sbjct: 72  LKNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNL 131

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           LS LP+ IG+L  L +L +  N L ELP  + + ++LREL +  N++  LPE +G++  L
Sbjct: 132 LSELPEEIGNLNKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEKIGELALL 191

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
            VL +  N ++++P ++    +LR L+V  N+L ++PES+     L+++++ +N  DL+ 
Sbjct: 192 RVLDLEDNQLQKMPDSLHKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSN--DLKE 249

Query: 317 LPRSIGNLEMLEELDIS-NNQIRV 339
           LP S+  +E LE LD+  N+++++
Sbjct: 250 LPESLLAMESLERLDLRWNHELKI 273



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 70/192 (36%), Positives = 119/192 (61%), Gaps = 1/192 (0%)

Query: 103 DNIEWLPDSIGKLSSLVS-LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++I+ +P  IG L ++   L    N++ ++P  IG L+ ++ L++  N + ELP+ IG+L
Sbjct: 83  NHIDLIPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNL 142

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             LV L +  N+++ LP  LSRL  L EL L  N ++ LP+ IG L  L+ L +E N L+
Sbjct: 143 NKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQ 202

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           ++P ++ +C +LR L V +N+L  LPE++G +  L  L VR N++K+LP ++ ++ SL  
Sbjct: 203 KMPDSLHKCLTLRRLNVRHNKLSTLPESIGHLKNLLELDVRSNDLKELPESLLAMESLER 262

Query: 282 LDVSFNELESVP 293
           LD+ +N    +P
Sbjct: 263 LDLRWNHELKIP 274



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 104/176 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ +P  IG+L+ +  L++S+N +  +P  IG L+ L +L +  NR+ ELP+ +  L 
Sbjct: 107 NQLQSIPPEIGQLTKVRYLNVSDNLLSELPEEIGNLNKLVELRIMNNRLTELPEGLSRLT 166

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+I+ LP  +  L  L  LDL  N L  +PDS+   ++L++L V  N L  
Sbjct: 167 NLRELHLKKNKITILPEKIGELALLRVLDLEDNQLQKMPDSLHKCLTLRRLNVRHNKLST 226

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LP +IG   +L EL V  N LK LPE++  + +LE L +R+N+  ++P  +  L +
Sbjct: 227 LPESIGHLKNLLELDVRSNDLKELPESLLAMESLERLDLRWNHELKIPIWLDELEA 282



 Score = 77.8 bits (190), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 103/199 (51%), Gaps = 4/199 (2%)

Query: 189 ELDLGSNNLSSLPDSIGSLI-SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           +++L   NL  LP    S I  +K+L +  NDL ++P  I   +S+  L +  N++  LP
Sbjct: 7   KINLAQMNLKKLPVVEESQIKEIKELNLFDNDLRKIPTEIFDMTSMEILNISVNKINKLP 66

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE-LDVSFNELESVPESLCFATTLVKMN 306
             +  +  L +L   +N+I  +P  +  L ++ + L    N+L+S+P  +   T +  +N
Sbjct: 67  AEITNLKNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHNNQLQSIPPEIGQLTKVRYLN 126

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + +N   L  LP  IGNL  L EL I NN++  LP+    L+ LR L +++N + + P  
Sbjct: 127 VSDNL--LSELPEEIGNLNKLVELRIMNNRLTELPEGLSRLTNLRELHLKKNKITILPEK 184

Query: 367 IVEMGAQAVVQYMADLVEK 385
           I E+    V+    + ++K
Sbjct: 185 IGELALLRVLDLEDNQLQK 203


>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
          Length = 1450

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/266 (32%), Positives = 150/266 (56%), Gaps = 2/266 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  +GSL  L  L +  N++E L 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIETLE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +  C SL++L +  N L+ LPE++G +  L VL +  N +  LP ++  L ++ ELD 
Sbjct: 247 EGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMYLPDSIGGLIAIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +NF  L  LP  IGN + +  L + +N++ VLP+  
Sbjct: 307 SFNEIETLPSSIGQLSNIRTFAADHNF--LTQLPPEIGNWKYVTVLFLHSNKLEVLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             + +L+V+ + +N L+  P +I+++
Sbjct: 365 GDMQKLKVINLSDNRLKYLPYSILQL 390



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 108/337 (32%), Positives = 162/337 (48%), Gaps = 29/337 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN    ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLFVRLVPCRCLRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLYKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D N+L  +P  +G +  L  L +  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLDISKNNIET 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           L   +S   SL++L +S N L+ +PES+     L  + I  N   L  LP SIG L  +E
Sbjct: 245 LEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDEN--QLMYLPDSIGGLIAIE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           ELD S N+I  LP S   LS +R      N L ++PP
Sbjct: 303 ELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPP 339



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 110/217 (50%), Gaps = 23/217 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  N++  +P  +G L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP--------------------- 201
            L YLD+  N I  L   +S    L++L L SN+L  LP                     
Sbjct: 231 HLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMY 290

Query: 202 --DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
             DSIG LI++++L    N++E LP +IGQ S++R    D+N L  LP  +G    + VL
Sbjct: 291 LPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  N ++ LP  M  +  L+ +++S N L+ +P S+
Sbjct: 351 FLHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSI 387



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/181 (34%), Positives = 102/181 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +G L  L  LD+S+N I  +   + G  SL+ L L +N + +LP+SIG L  L  L
Sbjct: 222 VPGFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVL 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ+  LP ++  L+ +EELD   N + +LP SIG L +++    + N L +LP  I
Sbjct: 282 KIDENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    +  L +  N+L+ LPE +G +  L+V+++  N +K LP ++  L  L  L +S N
Sbjct: 342 GNWKYVTVLFLHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDN 401

Query: 288 E 288
           +
Sbjct: 402 Q 402



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 88/167 (52%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +NIE L + +    SL  L LS N +  +P +IG L  L  L +  N+++ LPDSIG L+
Sbjct: 240 NNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMYLPDSIGGLI 299

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           ++  LD   N+I  LP ++ +L  +       N L+ LP  IG+   +  L + +N LE 
Sbjct: 300 AIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLFLHSNKLEV 359

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           LP  +G    L+ + +  NRLK LP ++ ++  L  L +  N  K L
Sbjct: 360 LPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLYKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI      A+V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129


>gi|383872300|ref|NP_001244517.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|355783099|gb|EHH65020.1| hypothetical protein EGM_18359 [Macaca fascicularis]
 gi|380784083|gb|AFE63917.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|383421817|gb|AFH34122.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
 gi|384943642|gb|AFI35426.1| leucine-rich repeat protein SHOC-2 [Macaca mulatta]
          Length = 582

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +LS+   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P ++S  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  131 bits (329), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|428179184|gb|EKX48056.1| hypothetical protein GUITHDRAFT_93733 [Guillardia theta CCMP2712]
          Length = 567

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/267 (31%), Positives = 149/267 (55%), Gaps = 9/267 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ +P     L+SL  L +  N IV +P+ IG ++++K L L  N II  P SI  L+ L
Sbjct: 111 IKEIPREFSCLTSLTLLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQL 170

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L++ GN +S  P ++ ++  L  LD   N++  L   IG+L+ +K++++  N ++E+P
Sbjct: 171 ETLNMSGNAVSVFPKSVCKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEIP 230

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L++D+NRL  L  A+G + +L  L V +N I++LP+    L++L++L +
Sbjct: 231 AQIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLAL 290

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL----DISNNQIRVL 340
           + N+L  +  ++     L ++ + +N+  LRALP +I +L+ L  +    D + NQI   
Sbjct: 291 NHNKLIYLSGAVSSYQRLAELYVSHNY--LRALPDAISSLKKLINMLFLDDCNLNQI--- 345

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNI 367
           PD+      LR L    N + + P  I
Sbjct: 346 PDAIGYCISLRCLSAGGNTITLVPAAI 372



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 164/338 (48%), Gaps = 26/338 (7%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + I+ +P  IGKL  L +L L  NR+  + A IG L+SL  LD+  N+I ELP    DL
Sbjct: 223 FNKIDEIPAQIGKLVHLTTLKLDFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDL 282

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL-KKLIVETNDL 220
            +L  L L  N++  L  A+S   RL EL +  N L +LPD+I SL  L   L ++  +L
Sbjct: 283 TNLQQLALNHNKLIYLSGAVSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCNL 342

Query: 221 EELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP---------- 270
            ++P  IG C SLR L    N +  +P A+  + +LE+L++  N I   P          
Sbjct: 343 NQIPDAIGYCISLRCLSAGGNTITLVPAAISGLTSLEILNLSMNKICFFPEVYNLTNMVQ 402

Query: 271 ------------TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
                        T+  +  L EL +  N+L +VP ++    +L  + +  N   + +LP
Sbjct: 403 LNLNDNLIANIKMTIGDMVRLEELYIGNNKLSTVPSTVGCLLSLHSLELQRN--RILSLP 460

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
            SIG L +L  L +  N +  LP S   L  L VL +++N +  PP  I+ + +   +  
Sbjct: 461 ESIGALTLLRSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQISEPPSAILSLSSLKTLTL 520

Query: 379 MADLVEKRDAKTQPVKQKKSWVEMCFFSRSNKRKRNGM 416
             + ++K   K Q  + K S +E      +   +R+GM
Sbjct: 521 GKNKLDKMPDK-QVQRLKSSGMEEEDDENTRAPRRDGM 557



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/344 (29%), Positives = 165/344 (47%), Gaps = 39/344 (11%)

Query: 97  LQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRI--VAVPATIGGLSSLKKLDLHANRII 152
           LQ+ ++D   +  LP  +G+ +SL  L + EN I  + VPA+I  L++L  LDL  N I 
Sbjct: 6   LQSLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIPVPASIHALTNLIALDLSENDIS 65

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVA------------------------LSRLVRLE 188
            LPD +  LL L  L L  N+IS++P++                         S L  L 
Sbjct: 66  VLPDEVCSLLKLEALYLDDNRISSIPLSEMGSCTALLEIVADNNLIKEIPREFSCLTSLT 125

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
            L +G NN+ ++P  IG + ++K LI++ N++   P +I     L  L +  N +   P+
Sbjct: 126 LLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQLETLNMSGNAVSVFPK 185

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
           +V K+  L  L    N++++L   + +L  ++E+ +SFN+++ +P  +     L  + + 
Sbjct: 186 SVCKVGNLYSLDFSRNDMEKLVPYIGNLLGMKEMVLSFNKIDEIPAQIGKLVHLTTLKL- 244

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
            +F  L  L  +IG L  L  LD+S+NQI  LP  F  L+ L+ L +  N L      I 
Sbjct: 245 -DFNRLTFLHAAIGALTSLTCLDVSHNQIEELPSEFFDLTNLQQLALNHNKL------IY 297

Query: 369 EMGAQAVVQYMADLVEKRD---AKTQPVKQKKSWVEMCFFSRSN 409
             GA +  Q +A+L    +   A    +   K  + M F    N
Sbjct: 298 LSGAVSSYQRLAELYVSHNYLRALPDAISSLKKLINMLFLDDCN 341



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/250 (33%), Positives = 136/250 (54%), Gaps = 5/250 (2%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI--IELPDSIGDLLSLVYLDLRG 171
            LS L SL L  NR+ ++PA +G  +SL  L +  N I  I +P SI  L +L+ LDL  
Sbjct: 2   HLSQLQSLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIPVPASIHALTNLIALDLSE 61

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLEELPHTIGQC 230
           N IS LP  +  L++LE L L  N +SS+P S +GS  +L +++ + N ++E+P      
Sbjct: 62  NDISVLPDEVCSLLKLEALYLDDNRISSIPLSEMGSCTALLEIVADNNLIKEIPREFSCL 121

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
           +SL  L + +N +  +P  +G +  ++ L ++ N I   P+++S L  L  L++S N + 
Sbjct: 122 TSLTLLGIGFNNIVTIPSQIGMMTAMKSLILQKNEIIYFPSSISWLMQLETLNMSGNAVS 181

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
             P+S+C    L  ++   N  D+  L   IGNL  ++E+ +S N+I  +P     L  L
Sbjct: 182 VFPKSVCKVGNLYSLDFSRN--DMEKLVPYIGNLLGMKEMVLSFNKIDEIPAQIGKLVHL 239

Query: 351 RVLRVQENPL 360
             L++  N L
Sbjct: 240 TTLKLDFNRL 249



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 54/148 (36%), Positives = 76/148 (51%), Gaps = 20/148 (13%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEW--------------------LPDSIGK 114
           LS+ K+    EV +      LNL + L+ NI+                     +P ++G 
Sbjct: 383 LSMNKICFFPEVYNLTNMVQLNLNDNLIANIKMTIGDMVRLEELYIGNNKLSTVPSTVGC 442

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L SL SL+L  NRI+++P +IG L+ L+ L LH N +  LP S+  L+ L  L LR NQI
Sbjct: 443 LLSLHSLELQRNRILSLPESIGALTLLRSLKLHGNLLSSLPSSVSRLIHLEVLTLRDNQI 502

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPD 202
           S  P A+  L  L+ L LG N L  +PD
Sbjct: 503 SEPPSAILSLSSLKTLTLGKNKLDKMPD 530



 Score = 46.2 bits (108), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 38/107 (35%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           LS L+ L +  N L S+P  L   T+L  ++I  N  +   +P SI  L  L  LD+S N
Sbjct: 3   LSQLQSLILDRNRLSSLPAQLGQCTSLTFLSIVENEIEGIPVPASIHALTNLIALDLSEN 62

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA-QAVVQYMAD 381
            I VLPD    L +L  L + +N +   P  + EMG+  A+++ +AD
Sbjct: 63  DISVLPDEVCSLLKLEALYLDDNRISSIP--LSEMGSCTALLEIVAD 107


>gi|429961782|gb|ELA41326.1| hypothetical protein VICG_01566, partial [Vittaforma corneae ATCC
           50505]
          Length = 564

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/271 (34%), Positives = 146/271 (53%), Gaps = 10/271 (3%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++N++ LP  IG+L +L  LDL  NR+  +P  +  L +L+ LDL+ NR+  LP  + +L
Sbjct: 76  LNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLYGNRLRTLPYEVEEL 135

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            +L +LDL  N+  + P  + +L  LE LDL  N     P  I  L  L++L +  N L+
Sbjct: 136 KNLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNKFGLFPIEIAELKKLQRLELRGNKLK 195

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  IG+   LR L +D N L++ P  + ++  L+ L +R N +K LP  + +L  L+ 
Sbjct: 196 LLPDEIGEMKELRTLHLDDNELESFPTVIAELKKLQTLYLRGNKLKLLPDEIETLKELQT 255

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L + +NE ES P  +     L  + +GNN   L  LP  +  LE L EL +++N++  LP
Sbjct: 256 LYLGYNEFESFPTVIVKLKNLQHLFLGNN--KLETLPAKLEELEHLGELYLNDNKLETLP 313

Query: 342 DSFRMLS-RLRVLRVQENPLEVPPRNIVEMG 371
                LS  LR+L +  N       NI E+G
Sbjct: 314 IEIEKLSGSLRLLNLMGN-------NISEVG 337



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 140/268 (52%), Gaps = 2/268 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I ++  +I +L  L  L+LS N +  +P  IG L +L+ LDL+ NR+  LP  + +L +L
Sbjct: 56  IRYIDSNIKRLVKLEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKNL 115

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            +LDL GN++  LP  +  L  L+ LDLG N   S P  I  L +L++L +  N     P
Sbjct: 116 QHLDLYGNRLRTLPYEVEELKNLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNKFGLFP 175

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I +   L+ L +  N+LK LP+ +G++  L  L +  N ++  PT ++ L  L+ L +
Sbjct: 176 IEIAELKKLQRLELRGNKLKLLPDEIGEMKELRTLHLDDNELESFPTVIAELKKLQTLYL 235

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L+ +P+ +     L  + +G  + +  + P  I  L+ L+ L + NN++  LP   
Sbjct: 236 RGNKLKLLPDEIETLKELQTLYLG--YNEFESFPTVIVKLKNLQHLFLGNNKLETLPAKL 293

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGA 372
             L  L  L + +N LE  P  I ++  
Sbjct: 294 EELEHLGELYLNDNKLETLPIEIEKLSG 321



 Score = 85.1 bits (209), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 98/182 (53%), Gaps = 2/182 (1%)

Query: 189 ELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPE 248
           E+ +    +  +  +I  L+ L+KL +  N+L+ LP  IG+  +L+ L +  NRL+ LP 
Sbjct: 48  EISICRQGIRYIDSNIKRLVKLEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPY 107

Query: 249 AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG 308
            V ++  L+ L +  N ++ LP  +  L +L+ LD+  N+ ES P  +     L ++++ 
Sbjct: 108 EVEELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLGHNKFESFPTVIRKLKNLERLDLN 167

Query: 309 NNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIV 368
           +N   L   P  I  L+ L+ L++  N++++LPD    +  LR L + +N LE  P  I 
Sbjct: 168 DNKFGL--FPIEIAELKKLQRLELRGNKLKLLPDEIGEMKELRTLHLDDNELESFPTVIA 225

Query: 369 EM 370
           E+
Sbjct: 226 EL 227


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  LISL  L+V  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L++D NRL  LPEA+G    L  L +  N +  LPT++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    I +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCIRDNR--LTRIPSEVSQAMELHVLDVAGNRLHHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TTL-KLKALWLSDN 390



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 104/310 (33%), Positives = 156/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N ++ +P  +  L  L  L +  N L  +PE++     L ++ +  N   L  
Sbjct: 246 TDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR--LLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP SIG L+ L  L+   N++  LP        L V  +++N L   P  +    +QA+ 
Sbjct: 304 LPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEV----SQAME 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/281 (31%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N I  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N + +LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGNLEM 326
            LE +PE +    +L  + +  N  +                     L  LP +IG+ E 
Sbjct: 231 RLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCEN 290

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L EL ++ N++  LP S   L +L  L    N L   P+ I
Sbjct: 291 LTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEI 331



 Score = 44.7 bits (104), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L+V     NPL   P +  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 140 LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHL 199

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  LISL  L+V  N LE +P
Sbjct: 200 KDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVP 259

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L++D NRL  LPEA+G    L  L +  N +  LPT++  L  L  L+ 
Sbjct: 260 DGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNA 319

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    I +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 320 DRNKLVSLPKEIGGCCSLTVFCIRDNR--LTRIPSEVSQAMELHVLDVAGNRLHHLPLSL 377

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 378 TTL-KLKALWLSDN 390



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/310 (33%), Positives = 156/310 (50%), Gaps = 30/310 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN ++ LP  I     LV LD+S N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 66  LSDNEVQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 126 ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNE 185

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
           + SLP+SIG+L+ LK L ++ N L ELP  IG   +L  L V  NRL+ LPE +  + +L
Sbjct: 186 IYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISL 245

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N ++ +P  +  L  L  L +  N L  +PE++     L ++ +  N   L  
Sbjct: 246 TDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR--LLT 303

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP SIG L+ L  L+   N++  LP        L V  +++N L   P  +    +QA+ 
Sbjct: 304 LPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEV----SQAME 359

Query: 377 QYMADLVEKR 386
            ++ D+   R
Sbjct: 360 LHVLDVAGNR 369



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 137/281 (48%), Gaps = 21/281 (7%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+   +L  L  L LS+N +  +P  I     L +LD+  N I E+P+SI    +L   
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN ++ LP +   L  L  L +   +L SLP++IG+L +L  L +  N L  LP ++
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   L EL +  N + +LPE++G +  L+ L +  N + +LP  + +L +L  LDVS N
Sbjct: 171 TQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGNLEM 326
            LE +PE +    +L  + +  N  +                     L  LP +IG+ E 
Sbjct: 231 RLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCEN 290

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           L EL ++ N++  LP S   L +L  L    N L   P+ I
Sbjct: 291 LTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPKEI 331



 Score = 44.7 bits (104), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 34/116 (29%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ ++  +P  +   + SL EL +  N+L  +PE       L K+ + +N  ++
Sbjct: 14  VEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDN--EV 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  I N   L ELD+S N I  +P+S      L+V     NPL   P +  E+
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPEL 127


>gi|395825406|ref|XP_003785926.1| PREDICTED: protein LAP2 isoform 3 [Otolemur garnettii]
          Length = 1303

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 161/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++ +LP+  
Sbjct: 307 SFNEVEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLEILPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ DA+TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDAETQ 418



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|260793208|ref|XP_002591604.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
 gi|229276813|gb|EEN47615.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
          Length = 889

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 29/302 (9%)

Query: 108 LPDSI----GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           LPD +    G+++ +  LDLS  R+  +   + G++ LK L+L  N +  LP  +G L++
Sbjct: 38  LPDEMSEVAGRITDIKHLDLSNRRLTTLLPELFGMTKLKWLNLRDNPLQTLPVEVGQLIN 97

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           + +LDL   ++  LP  +  L  LE L+L  N L +LP  IG L ++K L +    L  L
Sbjct: 98  VKHLDLSNCKLRTLPPIVGGLTHLEWLNLAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTL 157

Query: 224 PHTIGQCSSLRELRVDYN-----------------------RLKALPEAVGKIHTLEVLS 260
           PH +G+ + L  LR+  N                       +L+ LP  VG++  LE L 
Sbjct: 158 PHNVGKLTQLEWLRLSSNPLQTFPAEVGQLINFKHLDLPECQLRTLPPEVGRLTQLERLD 217

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N ++ LP  +  L++++ L +S+ +L+++P  +   T L  +++ +N   L+ LP  
Sbjct: 218 LSKNPLQTLPAEVGHLTNIKHLFLSWCQLDTLPPEVGRLTQLEWLSLSHN--PLQTLPVE 275

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +G L  +E L + N  ++ LP     L RL  L V+ NP   PP  +   G  A+ QY  
Sbjct: 276 VGQLSNIEHLILRNCHLQSLPPEVGKLRRLSDLDVKGNPFLKPPDEVCSQGVTAIRQYFD 335

Query: 381 DL 382
           +L
Sbjct: 336 EL 337



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 112/207 (54%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G   L   N   + ++ LP  IG+L+++  LDL   ++  +P  +G L+ L+ L L +N 
Sbjct: 117 GLTHLEWLNLAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNP 176

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +   P  +G L++  +LDL   Q+  LP  + RL +LE LDL  N L +LP  +G L ++
Sbjct: 177 LQTFPAEVGQLINFKHLDLPECQLRTLPPEVGRLTQLERLDLSKNPLQTLPAEVGHLTNI 236

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           K L +    L+ LP  +G+ + L  L + +N L+ LP  VG++  +E L +R  +++ LP
Sbjct: 237 KHLFLSWCQLDTLPPEVGRLTQLEWLSLSHNPLQTLPVEVGQLSNIEHLILRNCHLQSLP 296

Query: 271 TTMSSLSSLRELDVSFNELESVPESLC 297
             +  L  L +LDV  N     P+ +C
Sbjct: 297 PEVGKLRRLSDLDVKGNPFLKPPDEVC 323



 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/286 (28%), Positives = 143/286 (50%), Gaps = 32/286 (11%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGD-------------------- 160
           L L +  +  VPA +  L+ L+ L L  NR I LPD + +                    
Sbjct: 5   LRLGDCNLDKVPAAVMKLTQLETLILSNNRDITLPDEMSEVAGRITDIKHLDLSNRRLTT 64

Query: 161 -------LLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
                  +  L +L+LR N +  LPV + +L+ ++ LDL +  L +LP  +G L  L+ L
Sbjct: 65  LLPELFGMTKLKWLNLRDNPLQTLPVEVGQLINVKHLDLSNCKLRTLPPIVGGLTHLEWL 124

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L+ LP  IGQ ++++ L +   +L+ LP  VGK+  LE L +  N ++  P  +
Sbjct: 125 NLAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNPLQTFPAEV 184

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L + + LD+   +L ++P  +   T L ++++  N   L+ LP  +G+L  ++ L +S
Sbjct: 185 GQLINFKHLDLPECQLRTLPPEVGRLTQLERLDLSKN--PLQTLPAEVGHLTNIKHLFLS 242

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             Q+  LP     L++L  L +  NPL+  P   VE+G  + ++++
Sbjct: 243 WCQLDTLPPEVGRLTQLEWLSLSHNPLQTLP---VEVGQLSNIEHL 285


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/260 (34%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IGKL +L +L L+EN +  +P  I  L +L  LDL+ N +  LP+ IG L +L  L
Sbjct: 55  IPKEIGKLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKEL 114

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++ LP ++ +L  LE L+L  N L++LP+ I  L SL+ L +  N+++ LP  I
Sbjct: 115 NLSGNQLTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q S+L  L +  N++K L     ++  L+ L++  N ++  P  +  L SL  L++++N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
             + +PE +     L  + +  N   L +LP  IG LE LE L +  N++  LP     L
Sbjct: 235 RFKILPEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHL 292

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L++LR+++N L   P  I
Sbjct: 293 RGLKILRLEQNRLTAIPEEI 312



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP+ IG   +L  L L  NR+ A+P  IG L +L+ L L  N +  +P+ I  L +L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N++ ALP  + +L  L+EL+L  N L+ LP SIG L +L+ L +  N L  LP
Sbjct: 89  GTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLATLP 148

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I    SL+ L +  N +K+LP+ + ++  L  L +  N IK+L      L +L+ L++
Sbjct: 149 EEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNL 208

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+LE+ P  +    +L  +N+  N+   + LP  I  LE L+ L+++ NQ+  LP+  
Sbjct: 209 LDNKLENFPADIVQLKSLEFLNL--NYNRFKILPEEILQLENLQVLELTGNQLTSLPEGI 266

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             L +L  L ++ N L   P+ I
Sbjct: 267 GRLEKLESLFLEGNRLTTLPKGI 289



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 133/247 (53%), Gaps = 7/247 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE     GT DL       + ++ LP+ IGKL +L  L+LS N++  +P +IG L +L+ 
Sbjct: 82  IEQLQNLGTLDL-----YENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEI 136

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N++  LP+ I  L SL  L+L  N+I +LP  +S+L  L  LDLG N +  L   
Sbjct: 137 LELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLD 196

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
              L +LK L +  N LE  P  I Q  SL  L ++YNR K LPE + ++  L+VL +  
Sbjct: 197 FKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTG 256

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L  L  L +  N L ++P+ +     L  + +  N   L A+P  IG+
Sbjct: 257 NQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQN--RLTAIPEEIGS 314

Query: 324 LEMLEEL 330
           L+ L+EL
Sbjct: 315 LQNLKEL 321



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 138/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L  S+   S +  LD+S   +  +P  IG   +L+KL L  NR+  +P  IG L +L  L
Sbjct: 9   LEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETL 68

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  +P  + +L  L  LDL  N L +LP+ IG L +LK+L +  N L  LP +I
Sbjct: 69  ILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSI 128

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +  N+L  LPE +  + +L++L++  N IK LP  +S LS+L  LD+  N
Sbjct: 129 GQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +++ +         L  +N+ +N   L   P  I  L+ LE L+++ N+ ++LP+    L
Sbjct: 189 KIKRLSLDFKRLQNLKSLNLLDN--KLENFPADIVQLKSLEFLNLNYNRFKILPEEILQL 246

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+VL +  N L   P  I
Sbjct: 247 ENLQVLELTGNQLTSLPEGI 266



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/206 (29%), Positives = 106/206 (51%), Gaps = 25/206 (12%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           LD+ S  L +LP+ IG+  +L+KLI+  N L  +P  IG+  +L  L +  N LK +P  
Sbjct: 22  LDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNE 81

Query: 250 VGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF----------------------- 286
           + ++  L  L +  N +K LP  +  L +L+EL++S                        
Sbjct: 82  IEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLR 141

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L ++PE +    +L  +N+  N  ++++LP+ I  L  L  LD+  N+I+ L   F+ 
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFEN--EIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKR 199

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGA 372
           L  L+ L + +N LE  P +IV++ +
Sbjct: 200 LQNLKSLNLLDNKLENFPADIVQLKS 225



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L+DN +E  P  I +L SL  L+L+ NR   +P  I  L +L+ L+L  N++  LP+ IG
Sbjct: 208 LLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIG 267

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
            L  L  L L GN+++ LP  +  L  L+ L L  N L+++P+ IGSL +LK+L ++
Sbjct: 268 RLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKELYLQ 324



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/89 (38%), Positives = 51/89 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  L+L+ N++ ++P  IG L  L+ L L  NR+  LP  IG L  L  L
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKIL 298

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNN 196
            L  N+++A+P  +  L  L+EL L   N
Sbjct: 299 RLEQNRLTAIPEEIGSLQNLKELYLQDFN 327



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 2/107 (1%)

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +R++    L  ++ + S +R LDVS  ELE++PE +     L K+ +  N   L A+P+ 
Sbjct: 1   MRHSIHSNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGN--RLTAIPKE 58

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           IG L  LE L ++ N ++ +P+    L  L  L + EN L+  P  I
Sbjct: 59  IGKLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEI 105


>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
 gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
          Length = 937

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/263 (34%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG L SL +L L+ N +  +P  IG LS+L +L L  N++  LP   G+L+ L  L
Sbjct: 57  LPPEIGTLQSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTEL 116

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+++LP    RL+ LE L L +N L+ LP+  G+L  L  L +++N LE L   I
Sbjct: 117 YLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEI 176

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L +L + YN+L  LP  + ++ +L  L+  YN +  LP  +  LS+L  L++S N
Sbjct: 177 RDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHN 236

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           ++E +P  +     L  +N+  N  +L  LP  IG L  L +L +S+N +  +P     L
Sbjct: 237 KIEKLPREIGQLKNLNTLNLIYN--NLYYLPSQIGELSQLIDLRLSHNYLDNIPSEIEKL 294

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
            +L  L +  N L++ P  I+++
Sbjct: 295 RKLTTLYLGYNKLKILPTGIIQL 317



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 142/263 (53%), Gaps = 5/263 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP  IG LS+L  L L+EN++  +P   G L  L +L L  N++  LP   G L++L
Sbjct: 77  LEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINL 136

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP     L +L  LDL SN L SL   I  L  L KL +  N L  LP
Sbjct: 137 ERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNLP 196

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I +  SL EL   YN+L  LP  +G++  L++L++ +N I++LP  +  L +L  L++
Sbjct: 197 PQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNL 256

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
            +N L  +P  +   + L+ + + +N+ D   +P  I  L  L  L +  N++++LP   
Sbjct: 257 IYNNLYYLPSQIGELSQLIDLRLSHNYLD--NIPSEIEKLRKLTTLYLGYNKLKILPTGI 314

Query: 345 RMLSR---LRVLRVQENPLEVPP 364
             L R   L +L ++EN L +PP
Sbjct: 315 IQLVRFGQLTILDLKENLLSIPP 337



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 121/233 (51%), Gaps = 3/233 (1%)

Query: 139 SSLKKLDLHANRIIELPDSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           + ++ LDL   R+  LP  IG L + L +LDLR N++  LP  +  L  L  L L +N L
Sbjct: 18  NKVETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYL 77

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
             LP  IG+L +L +L +  N L  LP   G    L EL +  N+L +LP   G++  LE
Sbjct: 78  EELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLE 137

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            LS+  N +  LP    +L  L  LD+  N+LES+   +     L K+NI  N   L  L
Sbjct: 138 RLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYN--QLTNL 195

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           P  I  +E L EL+ S NQ+ +LP     LS L +L +  N +E  PR I ++
Sbjct: 196 PPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIEKLPREIGQL 248



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 3/161 (1%)

Query: 236 LRVDYNRLKALPEAVGKI-HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           L + + RL +LP  +G++ + L+ L +R N +K LP  + +L SL  L ++ N LE +P 
Sbjct: 23  LDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEELPP 82

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +   +TL ++++  N   L  LP+  GNL  L EL ++NNQ+  LP  F  L  L  L 
Sbjct: 83  EIGNLSTLHRLSLTEN--KLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLERLS 140

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQ 395
           +  N L + P     +   + +   ++ +E  + + + +KQ
Sbjct: 141 LSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQ 181



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 7/171 (4%)

Query: 73  EKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEW-----LPDSIGKLSSLVSLDLSENR 127
           +KLS + L S    S     RDL   +KL  NI +     LP  I ++ SL+ L+ S N+
Sbjct: 157 KKLSWLDLKSNKLESLNPEIRDLKQLSKL--NISYNQLTNLPPQISEVESLIELNASYNQ 214

Query: 128 IVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRL 187
           +  +P  +G LS+L  L+L  N+I +LP  IG L +L  L+L  N +  LP  +  L +L
Sbjct: 215 LTILPGELGELSNLDLLNLSHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQIGELSQL 274

Query: 188 EELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            +L L  N L ++P  I  L  L  L +  N L+ LP  I Q     +L +
Sbjct: 275 IDLRLSHNYLDNIPSEIEKLRKLTTLYLGYNKLKILPTGIIQLVRFGQLTI 325



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 57/107 (53%), Gaps = 3/107 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP  IG+L +L +L+L  N +  +P+ IG LS L  L L  N +  +P  I  L 
Sbjct: 236 NKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQIGELSQLIDLRLSHNYLDNIPSEIEKLR 295

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEEL---DLGSNNLSSLPDSIGS 206
            L  L L  N++  LP  + +LVR  +L   DL  N LS  P+ I S
Sbjct: 296 KLTTLYLGYNKLKILPTGIIQLVRFGQLTILDLKENLLSIPPEIIWS 342


>gi|443707990|gb|ELU03328.1| hypothetical protein CAPTEDRAFT_140756 [Capitella teleta]
          Length = 476

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/270 (34%), Positives = 151/270 (55%), Gaps = 6/270 (2%)

Query: 92  TRDLNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           T+ LNL    +++  +++LP S G+LS L  L+L EN +  +P +   L+ +++LD+  N
Sbjct: 128 TQLLNLTELFLNDTFLDFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQIERLDIGNN 187

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
              ELPD IG L +L+ L    NQI A+P  +  L +L  LD   N L  + + I    +
Sbjct: 188 EFTELPDVIGGLTNLMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEFIAEQISECHT 247

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L  L +  N L+ LP ++G+ S+L  L+VD NRL  LP ++G + +L  L+V  N+++ L
Sbjct: 248 LADLHLSDNLLQHLPESLGRLSNLTSLKVDDNRLTCLPFSLGGLVSLSELNVGGNDLEDL 307

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLE 328
           P ++  L  LR L    N L  +P  L   + L  +++ GNN   L  +P  +G +  L 
Sbjct: 308 PPSIGLLRHLRTLYADENFLNEIPCELGSCSGLTVLSLRGNN---LMYVPDELGRIPRLR 364

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            L++S+N+IR LP S   L +L+ L + EN
Sbjct: 365 VLNLSDNKIRSLPFSLTKLKQLQALWLAEN 394



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/284 (32%), Positives = 149/284 (52%), Gaps = 10/284 (3%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            G R L + +   + I  LP ++G L++L  LD S+N ++ +P  I G   L+ ++   N
Sbjct: 62  HGIRKLTVSD---NEITLLPPALGTLANLEHLDFSKNGVIDIPENIKGCKYLRVVEASVN 118

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            + +L +    LL+L  L L    +  LP +  RL +L  L+L  N+L +LP S   L  
Sbjct: 119 PLGKLTEGFTQLLNLTELFLNDTFLDFLPGSFGRLSKLRILELRENHLKTLPRSFTRLTQ 178

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           +++L +  N+  ELP  IG  ++L EL  D N++KA+P  VG +  L  L    N ++ +
Sbjct: 179 IERLDIGNNEFTELPDVIGGLTNLMELWCDTNQIKAIPSVVGNLKQLMFLDASKNRLEFI 238

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
              +S   +L +L +S N L+ +PESL   + L  + + +N   L  LP S+G L  L E
Sbjct: 239 AEQISECHTLADLHLSDNLLQHLPESLGRLSNLTSLKVDDN--RLTCLPFSLGGLVSLSE 296

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPPRNIVEMGA 372
           L++  N +  LP S  +L  LR L   EN L E+P     E+G+
Sbjct: 297 LNVGGNDLEDLPPSIGLLRHLRTLYADENFLNEIP----CELGS 336



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/186 (36%), Positives = 107/186 (57%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P  +G L  L+ LD S+NR+  +   I    +L  L L  N +  LP+S+G L 
Sbjct: 210 NQIKAIPSVVGNLKQLMFLDASKNRLEFIAEQISECHTLADLHLSDNLLQHLPESLGRLS 269

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N+++ LP +L  LV L EL++G N+L  LP SIG L  L+ L  + N L E
Sbjct: 270 NLTSLKVDDNRLTCLPFSLGGLVSLSELNVGGNDLEDLPPSIGLLRHLRTLYADENFLNE 329

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +G CS L  L +  N L  +P+ +G+I  L VL++  N I+ LP +++ L  L+ L
Sbjct: 330 IPCELGSCSGLTVLSLRGNNLMYVPDELGRIPRLRVLNLSDNKIRSLPFSLTKLKQLQAL 389

Query: 283 DVSFNE 288
            ++ N+
Sbjct: 390 WLAENQ 395


>gi|386855875|ref|YP_006260052.1| Miro-like protein [Deinococcus gobiensis I-0]
 gi|379999404|gb|AFD24594.1| Miro-like protein [Deinococcus gobiensis I-0]
          Length = 212

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 118/224 (52%), Gaps = 25/224 (11%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL  N + A+P    GL  L+ L +  N++  LPDS+  L  L YL++  N +S LP  
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGW 61

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           L  L  L E    +N L  LP+S+G L  L++L V  N L  LP ++G C SLRE+    
Sbjct: 62  LGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGSLREIDAQG 121

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+L+ALP+ +G +  L  L++R+N++  LP TM  L+ LR LD+  N L  VPE L    
Sbjct: 122 NKLRALPDTLGSLSRLTSLNLRFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLA--- 178

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
                           LPR       LE+LD+  NQ+  LP SF
Sbjct: 179 ---------------QLPR-------LEKLDLRWNQLGRLPQSF 200



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/213 (35%), Positives = 115/213 (53%), Gaps = 5/213 (2%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LDL  N ++ALP   + L  L  L + +N L++LPDS+ SL  L  L V  N L ELP  
Sbjct: 2   LDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGW 61

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +G+   L E R   N L+ LPE++G +  L  L V +N +  LP ++    SLRE+D   
Sbjct: 62  LGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGSLREIDAQG 121

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+L ++P++L   + L  +N+   F DL ALP ++ +L  L  LD+  N++  +P+    
Sbjct: 122 NKLRALPDTLGSLSRLTSLNL--RFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLAQ 179

Query: 347 LSRLRVLRVQENPLEVPPRNIV---EMGAQAVV 376
           L RL  L ++ N L   P++     E G Q  V
Sbjct: 180 LPRLEKLDLRWNQLGRLPQSFGAFRERGGQVYV 212



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 103/189 (54%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD    L  L  L +S N++ A+P ++  L+ L  L++  N + ELP  +G+L  L   
Sbjct: 12  LPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDNALSELPGWLGELGHLTEF 71

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
               N +  LP ++  L  L EL +  N L++LP S+G   SL+++  + N L  LP T+
Sbjct: 72  RAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGSLREIDAQGNKLRALPDTL 131

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G  S L  L + +N L ALP+ +  +  L  L +R N + ++P  ++ L  L +LD+ +N
Sbjct: 132 GSLSRLTSLNLRFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLAQLPRLEKLDLRWN 191

Query: 288 ELESVPESL 296
           +L  +P+S 
Sbjct: 192 QLGRLPQSF 200



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/169 (34%), Positives = 94/169 (55%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPDS+  L+ L  L++++N +  +P  +G L  L +   + N +  LP+S+G L  L  L
Sbjct: 35  LPDSLRSLARLTYLNVTDNALSELPGWLGELGHLTEFRAYNNALEYLPESMGHLSELREL 94

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N ++ LP +L     L E+D   N L +LPD++GSL  L  L +  NDL  LP T+
Sbjct: 95  HVMHNALTTLPQSLGGCGSLREIDAQGNKLRALPDTLGSLSRLTSLNLRFNDLSALPDTM 154

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
              + LR L +  NRL  +PE + ++  LE L +R+N + +LP +  + 
Sbjct: 155 RHLAELRFLDLRANRLTEVPEWLAQLPRLEKLDLRWNQLGRLPQSFGAF 203



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/124 (38%), Positives = 75/124 (60%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP+S+G LS L  L +  N +  +P ++GG  SL+++D   N++  LPD++G L  L
Sbjct: 78  LEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGSLREIDAQGNKLRALPDTLGSLSRL 137

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L+LR N +SALP  +  L  L  LDL +N L+ +P+ +  L  L+KL +  N L  LP
Sbjct: 138 TSLNLRFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLAQLPRLEKLDLRWNQLGRLP 197

Query: 225 HTIG 228
            + G
Sbjct: 198 QSFG 201



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 60/115 (52%), Gaps = 2/115 (1%)

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           +L + +N++  LP   + L  LR L VS N+L ++P+SL     L  +N+ +N   L  L
Sbjct: 1   MLDLGHNSLAALPDMFAGLPELRFLYVSNNKLTALPDSLRSLARLTYLNVTDN--ALSEL 58

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           P  +G L  L E    NN +  LP+S   LS LR L V  N L   P+++   G+
Sbjct: 59  PGWLGELGHLTEFRAYNNALEYLPESMGHLSELRELHVMHNALTTLPQSLGGCGS 113



 Score = 44.3 bits (103), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 24/61 (39%), Positives = 35/61 (57%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N   +++  LPD++  L+ L  LDL  NR+  VP  +  L  L+KLDL  N++  LP S 
Sbjct: 141 NLRFNDLSALPDTMRHLAELRFLDLRANRLTEVPEWLAQLPRLEKLDLRWNQLGRLPQSF 200

Query: 159 G 159
           G
Sbjct: 201 G 201


>gi|395825402|ref|XP_003785924.1| PREDICTED: protein LAP2 isoform 1 [Otolemur garnettii]
          Length = 1372

 Score =  134 bits (336), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 161/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++ +LP+  
Sbjct: 307 SFNEVEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLEILPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ DA+TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDAETQ 418



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|221117516|ref|XP_002157758.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Hydra
           magnipapillata]
          Length = 608

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 96/298 (32%), Positives = 159/298 (53%), Gaps = 7/298 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ +P+ +  L +L  LD  +N I  +   I  L  L KL L  N++  LPDS+    
Sbjct: 89  NEIKCIPNEVKYLPALNVLDAHDNCIEYLSDEISELKELGKLHLSHNKLTSLPDSLCQAT 148

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L GN + +LPV    L+ LEELDL  N L+SLP+S GSL+ +KKL +  N L  
Sbjct: 149 ALKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFGSLVQIKKLDLSKNLLTS 208

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP++     SL  L +  N+L  LP+  GK+ +LE+    YN I    TT    +++++L
Sbjct: 209 LPNSFDSLKSLINLNLSTNKLTVLPKGFGKLTSLEIFECSYNLITTF-TTFDDQTNIKQL 267

Query: 283 DVSFNELESVPESLCFA--TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            + +N ++ + E   F    +LV +++ +N   +  +P S   L  LE  D+SNN +  L
Sbjct: 268 FLGYNRIQKI-EDNAFEKMQSLVSLSLRDNA--ISEIPESFTKLRTLERADLSNNSLSTL 324

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKS 398
           P++   ++ L+ L +  N +    R+IV+ G  A++ Y+   + +     + +K  KS
Sbjct: 325 PNAVGKMN-LKSLTLDGNSMRSIRRDIVDRGTNAILAYLKSRLPEEKVPDEEIKIPKS 381



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 96/197 (48%), Gaps = 25/197 (12%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           LKKL L +N I  +P+ +  L +L  LD   N I  L   +S L  L +L L  N L+SL
Sbjct: 81  LKKLILASNEIKCIPNEVKYLPALNVLDAHDNCIEYLSDEISELKELGKLHLSHNKLTSL 140

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           PDS+    +LK L++  N L+ LP   G   +L EL +  N+L +LPE+ G         
Sbjct: 141 PDSLCQATALKVLLLAGNSLQSLPVNFGFLINLEELDLSDNKLTSLPESFG--------- 191

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
                         SL  +++LD+S N L S+P S     +L+ +N+  N   L  LP+ 
Sbjct: 192 --------------SLVQIKKLDLSKNLLTSLPNSFDSLKSLINLNLSTN--KLTVLPKG 235

Query: 321 IGNLEMLEELDISNNQI 337
            G L  LE  + S N I
Sbjct: 236 FGKLTSLEIFECSYNLI 252



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 45/321 (14%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  +P+S  KL +L   DLS N +  +P  +G ++ LK L L  N +  +   I 
Sbjct: 293 LRDNAISEIPESFTKLRTLERADLSNNSLSTLPNAVGKMN-LKSLTLDGNSMRSIRRDIV 351

Query: 160 DLLS---LVYLDLR------GNQISALPVALSRLVRLEELDLGSNNLSSLPDSI------ 204
           D  +   L YL  R       ++   +P ++S++   ++      N  ++ D        
Sbjct: 352 DRGTNAILAYLKSRLPEEKVPDEEIKIPKSVSKVNDNDQQKKIQENNKAVTDQFLIATTK 411

Query: 205 ------------------GSLISLKKLIVETNDLEELP-HTIGQCSSLRELRVDYNRLKA 245
                             G+ IS  K+ ++ N L   P   +   S+L EL + +N+L  
Sbjct: 412 NLSFSGGSGSIPSSFWLPGAQIS--KISIQHNGLTVYPLEIMNYASTLSELDISHNKLSN 469

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           + + V  +  L  L + +N +  LP+++S L  L E+ +SFN+  S+P  L     L  +
Sbjct: 470 ILDTVNILTKLVFLDLSHNVLSSLPSSISQLEHLLEVVLSFNKYSSIPPCLFKCKKLQTL 529

Query: 306 NIGNN-FADLRALPRSIGNLEM--LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            + NN   D+      +G LEM  L  LD+SNN I  +P     +  L+ L +  NP   
Sbjct: 530 LLSNNQITDIDV----VGLLEMKCLRTLDLSNNNIACVPPQLGNVEWLQSLNLDGNPFRN 585

Query: 363 PPRNIVEMGAQAVVQYMADLV 383
           P   I+  G Q ++ Y+ D +
Sbjct: 586 PRAQILMKGTQNLLAYLRDRI 606


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/303 (32%), Positives = 151/303 (49%), Gaps = 28/303 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  L D+I +L  L +L+LS N++  +P  IG ++ L +L+L  N+I  LP  +G L 
Sbjct: 252 NNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLPPELGHLS 311

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N ++ LP+ LS +  ++ELDL +N L  LP  I  L  L+ L ++ N+L  
Sbjct: 312 FLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTH 371

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS----- 277
           LP  +G    L+ L V  N+L  LP  + ++  L+VLS+  N IKQLP  M +L      
Sbjct: 372 LPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESI 431

Query: 278 ---------------------SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
                                +L +L +S N L S+PE LC   +L ++ +  N  ++  
Sbjct: 432 CLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRN--EIAE 489

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP +I  L  +   D+S+N I  LP     L  LR + +  N L   P   V++    V+
Sbjct: 490 LPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVL 549

Query: 377 QYM 379
             M
Sbjct: 550 YLM 552



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/277 (32%), Positives = 147/277 (53%), Gaps = 8/277 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP  +G+L++L  LDLS N +  +P  +G L +LK LD+  NR+  LP   GDL SL
Sbjct: 115 LEDLPPGVGELANLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSL 174

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI-SLKKLIVETNDLEEL 223
             L    N  S  P ++ RL  L+ L++  N ++ LPD+I  L  S+ +L +  N     
Sbjct: 175 TQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTF 234

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P ++  C SL  L    N L  L + + ++  L  L++ +N +  LP  +  ++ L EL+
Sbjct: 235 PESLAGCRSLITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELN 294

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           +S N++  +P  L   + L K+ +  N   L  LP  + N+  ++ELD+SNN +  LP  
Sbjct: 295 LSKNKIAHLPPELGHLSFLGKLYLSRNA--LATLPIELSNIAFIQELDLSNNGLDDLPIE 352

Query: 344 FRMLSRLRVLRVQENPL-EVPPRNIVEMGAQAVVQYM 379
              L +L+ L++  N L  +PP    E+G    +Q++
Sbjct: 353 IFKLDKLQTLKLDCNNLTHLPP----ELGHLFRLQHL 385



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 139/268 (51%), Gaps = 6/268 (2%)

Query: 113 GKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN 172
           G L  L  LD+ +NR+ ++P ++G LS+L +L  H N + +LP  +G+L +L  LDL  N
Sbjct: 77  GALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGELANLTVLDLSTN 136

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
            +  LP  + +L  L+ LD+ +N L +LP   G L SL +L    N     P +I +   
Sbjct: 137 NLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGF 196

Query: 233 LRELRVDYNRLKALPEAVGKI-HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           L+ L +  NR+  LP+A+ ++  ++  L +  N     P +++   SL  LD   N L  
Sbjct: 197 LKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCD 256

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLR 351
           + +++     L  +N+ +N   L  LPR IG + +L EL++S N+I  LP     LS L 
Sbjct: 257 LADNISQLCELATLNLSHN--KLTTLPRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLG 314

Query: 352 VLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L +  N L   P   +E+   A +Q +
Sbjct: 315 KLYLSRNALATLP---IELSNIAFIQEL 339



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/277 (34%), Positives = 137/277 (49%), Gaps = 28/277 (10%)

Query: 120 SLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL-SLVYLDLRGNQISALP 178
           +LDL   ++ A+P  +  L  L  L++ +N +  L D +  LL +L  L + GN+++ LP
Sbjct: 13  ALDLQGFKLRALPKGLFDLKELSALNVSSNDLTALEDEVVRLLPALTSLRINGNKLTGLP 72

Query: 179 -VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
            +    L  LE LD+G N L SLP S+G L +L +LI   N LE+LP  +G+ ++L  L 
Sbjct: 73  SLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLLEDLPPGVGELANLTVLD 132

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           +  N LK LP  VGK+H L+ L +  N +K LP     L SL +L  + N     PES+C
Sbjct: 133 LSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPESIC 192

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNL-EMLEELDISNNQIRVLPDS-----------FR 345
               L  +NI  N   +  LP +I  L + + ELD+S N+    P+S           FR
Sbjct: 193 RLGFLKTLNISCN--RITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLITLDFR 250

Query: 346 ------------MLSRLRVLRVQENPLEVPPRNIVEM 370
                        L  L  L +  N L   PR I EM
Sbjct: 251 DNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEM 287



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 144/308 (46%), Gaps = 48/308 (15%)

Query: 105 IEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           I  LPD+I +L  S+  LDLS NR V  P ++ G  SL  LD   N + +L D+I  L  
Sbjct: 207 ITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLCDLADNISQLCE 266

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI--------- 214
           L  L+L  N+++ LP  +  +  L EL+L  N ++ LP  +G L  L KL          
Sbjct: 267 LATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLPPELGHLSFLGKLYLSRNALATL 326

Query: 215 --------------VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
                         +  N L++LP  I +   L+ L++D N L  LP  +G +  L+ L 
Sbjct: 327 PIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRLQHLY 386

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD------- 313
           V  N +  LP  +S LS L+ L +  N ++ +P+ +     +  + +G+N  D       
Sbjct: 387 VSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLAAL 446

Query: 314 -----------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                            L ++P  + NL  L+EL +S N+I  LP++   L+++R+  + 
Sbjct: 447 EKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFDLS 506

Query: 357 ENPLEVPP 364
           +N +   P
Sbjct: 507 DNAIAALP 514



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 119/237 (50%), Gaps = 27/237 (11%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  LP  +  ++ +  LDLS N +  +P  I  L  L+ L L  N +  LP  +G L  L
Sbjct: 323 LATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTLKLDCNNLTHLPPELGHLFRL 382

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI---------------- 208
            +L +  NQ++ LP  +S+L RL+ L +  N +  LPD +G+L                 
Sbjct: 383 QHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESG 442

Query: 209 ----------SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
                     +L++L++  N L  +P  +   +SL+EL +  N +  LPEA+ +++ + +
Sbjct: 443 LAALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRI 502

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADL 314
             +  N I  LP+ +SSL SLRE+++S+N L S+P      T L  + +  NN  DL
Sbjct: 503 FDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDL 559



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/197 (31%), Positives = 107/197 (54%), Gaps = 3/197 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LP  +G L  L  L +S N++  +PA I  LS L+ L ++ N I +LPD +G L 
Sbjct: 367 NNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALK 426

Query: 163 SLVYLDLRGNQISALPVAL---SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            +  + L  N +    +A    + +  LE+L L  N L+S+P+ + +L SLK+L +  N+
Sbjct: 427 HIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNE 486

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + ELP  I + + +R   +  N + ALP  +  +H+L  +++ YN +  LP     L++L
Sbjct: 487 IAELPEAITRLNKIRIFDLSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNL 546

Query: 280 RELDVSFNELESVPESL 296
             L +  N L  +PE L
Sbjct: 547 CVLYLMHNNLTDLPEDL 563


>gi|156400914|ref|XP_001639037.1| predicted protein [Nematostella vectensis]
 gi|156226162|gb|EDO46974.1| predicted protein [Nematostella vectensis]
          Length = 414

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 142/254 (55%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +++LP + G+L SL  L+L EN +  +P ++  L +L++LD+  N   ELP  +G LL+L
Sbjct: 129 LDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNL 188

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N I  L   +  L RL  LD+  N L  LP  I SL SL  L +  N L E+P
Sbjct: 189 TELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIP 248

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG    L+ L+++ N L  LP ++GK+  LE L +  N +  LP ++  L  LR L++
Sbjct: 249 EQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNI 308

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LES+P  L   T +  +++ +N   L  LP SIG +  L+ +++++N++  LP SF
Sbjct: 309 DENFLESIPSELGSCTAMTILSLRDN--RLVHLPDSIGRMPKLQVINLASNRLEYLPYSF 366

Query: 345 RMLSRLRVLRVQEN 358
             L  L+ L + EN
Sbjct: 367 HKLVSLKALWLSEN 380



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 150/287 (52%), Gaps = 7/287 (2%)

Query: 95  LNLQN----KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            NLQN     L DN +  LP  +  L +L  LD S+N I+ +P TI    +L+++D   N
Sbjct: 45  FNLQNLQVLGLSDNELTILPSVLSNLVNLRILDFSKNGIIDIPETIKHCKNLQEIDASVN 104

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            I ++P++   L +L +L L    +  LP    RL+ L  L+L  N+L  LP S+  L +
Sbjct: 105 PIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRILELRENHLRVLPKSMSQLKN 164

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L++L +  N+  ELP  +G   +L EL +D N +K L   +G +  L  L V  N ++ L
Sbjct: 165 LERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWL 224

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P  + SL SL +L +S N L  +PE +     L  + +  N   L  LP SIG L  LEE
Sbjct: 225 PPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEENH--LGELPNSIGKLVELEE 282

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           L ++ N++  LP S   L +LRVL + EN LE  P  +    A  ++
Sbjct: 283 LILTCNELVSLPPSLGYLRKLRVLNIDENFLESIPSELGSCTAMTIL 329



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 148/280 (52%), Gaps = 25/280 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++I    +L  +D S N I  +P T   L++L  L L+   +  LP + G L+SL  L
Sbjct: 86  IPETIKHCKNLQEIDASVNPIGKIPETFCHLANLTHLYLNDAFLDFLPGNFGRLISLRIL 145

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +LR N +  LP ++S+L  LE LD+G+N  + LP  +G L++L +L +++N ++EL   I
Sbjct: 146 ELRENHLRVLPKSMSQLKNLERLDIGNNEFTELPMVVGCLLNLTELWMDSNAIKELRPEI 205

Query: 228 GQCSSLRELRVDYNRLKALP-----------------------EAVGKIHTLEVLSVRYN 264
           G    L  L V  NRL+ LP                       E +G +  L+ L +  N
Sbjct: 206 GLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLIEIPEQIGALGKLQTLKLEEN 265

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           ++ +LP ++  L  L EL ++ NEL S+P SL +   L  +NI  NF  L ++P  +G+ 
Sbjct: 266 HLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRVLNIDENF--LESIPSELGSC 323

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
             +  L + +N++  LPDS   + +L+V+ +  N LE  P
Sbjct: 324 TAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLP 363



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/196 (39%), Positives = 116/196 (59%), Gaps = 2/196 (1%)

Query: 95  LNLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           LNL    MD+  I+ L   IG L  L+ LD+S+NR+  +P  I  L SL  L L  N +I
Sbjct: 186 LNLTELWMDSNAIKELRPEIGLLRRLMFLDVSKNRLEWLPPEIESLQSLTDLYLSNNLLI 245

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
           E+P+ IG L  L  L L  N +  LP ++ +LV LEEL L  N L SLP S+G L  L+ 
Sbjct: 246 EIPEQIGALGKLQTLKLEENHLGELPNSIGKLVELEELILTCNELVSLPPSLGYLRKLRV 305

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTT 272
           L ++ N LE +P  +G C+++  L +  NRL  LP+++G++  L+V+++  N ++ LP +
Sbjct: 306 LNIDENFLESIPSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLEYLPYS 365

Query: 273 MSSLSSLRELDVSFNE 288
              L SL+ L +S N+
Sbjct: 366 FHKLVSLKALWLSENQ 381



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 3/81 (3%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           R LN+    +++I   P  +G  +++  L L +NR+V +P +IG +  L+ ++L +NR+ 
Sbjct: 304 RVLNIDENFLESI---PSELGSCTAMTILSLRDNRLVHLPDSIGRMPKLQVINLASNRLE 360

Query: 153 ELPDSIGDLLSLVYLDLRGNQ 173
            LP S   L+SL  L L  NQ
Sbjct: 361 YLPYSFHKLVSLKALWLSENQ 381


>gi|126310265|ref|XP_001371328.1| PREDICTED: leucine-rich repeat-containing protein 1 [Monodelphis
           domestica]
          Length = 525

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 139/254 (54%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  LK+LDL  N I  LP++IG L+ L
Sbjct: 141 LQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHL 200

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ++ LP  +  L  L  LD+  N L  LPD I  L SL  L++  N LE LP
Sbjct: 201 EDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLP 260

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L+ D NRL  L EAVG+  +L  L +  N +  LP ++  L  L  L+ 
Sbjct: 261 DGIGKLRKLSILKADQNRLVQLTEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNA 320

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L   ++ +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 321 DRNKLVSLPKEIGGCCSLTVFSVRDN--RLSRIPSEVSQATELHVLDVAGNRLLHLPLSL 378

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 379 TNL-KLKALWLSDN 391



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 89/274 (32%), Positives = 144/274 (52%), Gaps = 4/274 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S  +L +L  L +++  + ++P  IG L +L  L+L  N +  LP+S+  L  L  L
Sbjct: 121 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKEL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+I  LP  +  L+ LE+L L  N L+ LP  IG+L +L  L V  N LE LP  I
Sbjct: 181 DLGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEI 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
              +SL +L +  N L+ LP+ +GK+  L +L    N + QL   +    SL EL ++ N
Sbjct: 241 SGLASLTDLVISQNLLEVLPDGIGKLRKLSILKADQNRLVQLTEAVGECESLTELVLTEN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+S+     L  +N   N   L +LP+ IG    L    + +N++  +P      
Sbjct: 301 QLLTLPKSIGKLKKLSNLNADRN--KLVSLPKEIGGCCSLTVFSVRDNRLSRIPSEVSQA 358

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + L VL V  N L   P ++  +  +A+  +++D
Sbjct: 359 TELHVLDVAGNRLLHLPLSLTNLKLKAL--WLSD 390



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/311 (31%), Positives = 155/311 (49%), Gaps = 31/311 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRI------------------------VAVPATI 135
           L DN I+ LP  I     LV LD+S N I                          +P + 
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPNEVPERKTFCKSIKVSDLTEFFSFRLPESF 125

Query: 136 GGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
             L +L  L ++   +  LP++IG+L +L  L+LR N ++ LP +L++L RL+ELDLG+N
Sbjct: 126 PELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNN 185

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            + +LP++IG+LI L+ L ++ N L ELP  IG   +L  L V  N+L+ LP+ +  + +
Sbjct: 186 EIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEISGLAS 245

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ LP  +  L  L  L    N L  + E++    +L ++ +  N   L 
Sbjct: 246 LTDLVISQNLLEVLPDGIGKLRKLSILKADQNRLVQLTEAVGECESLTELVLTEN--QLL 303

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
            LP+SIG L+ L  L+   N++  LP        L V  V++N L   P  +    +QA 
Sbjct: 304 TLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFSVRDNRLSRIPSEV----SQAT 359

Query: 376 VQYMADLVEKR 386
             ++ D+   R
Sbjct: 360 ELHVLDVAGNR 370



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/265 (32%), Positives = 145/265 (54%), Gaps = 14/265 (5%)

Query: 120 SLDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           ++D     +V VP  I   + SL++L L AN++ ELP+    L+ L  L L  N+I  LP
Sbjct: 16  TIDKRHCSLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLP 75

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE-----LPHTIGQCSSL 233
             ++  ++L ELD+  N    +P+ +    +  K I + +DL E     LP +  +  +L
Sbjct: 76  PEIANFMQLVELDVSRN---EIPNEVPERKTFCKSI-KVSDLTEFFSFRLPESFPELQNL 131

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L V+   L++LPE +G ++ L  L +R N +  LP +++ L  L+ELD+  NE+ ++P
Sbjct: 132 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLP 191

Query: 294 ESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           E++     L  + + GN  A+   LP+ IGNL+ L  LD+S N++  LPD    L+ L  
Sbjct: 192 ETIGALIHLEDLWLDGNQLAE---LPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTD 248

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQ 377
           L + +N LEV P  I ++   ++++
Sbjct: 249 LVISQNLLEVLPDGIGKLRKLSILK 273



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 137/309 (44%), Gaps = 50/309 (16%)

Query: 107 WLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           ++P+ I + + SL  L L  N++  +P     L  L+KL L  N I  LP  I + + LV
Sbjct: 26  YVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLV 85

Query: 166 YLDLRGNQI-----------------------------------------------SALP 178
            LD+  N+I                                                +LP
Sbjct: 86  ELDVSRNEIPNEVPERKTFCKSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDISLQSLP 145

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             +  L  L  L+L  N L+ LP+S+  L  LK+L +  N++  LP TIG    L +L +
Sbjct: 146 ENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLEDLWL 205

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           D N+L  LP+ +G +  L  L V  N +++LP  +S L+SL +L +S N LE +P+ +  
Sbjct: 206 DGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDGIGK 265

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +    N   L  L  ++G  E L EL ++ NQ+  LP S   L +L  L    N
Sbjct: 266 LRKLSILKADQN--RLVQLTEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRN 323

Query: 359 PLEVPPRNI 367
            L   P+ I
Sbjct: 324 KLVSLPKEI 332



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 54/145 (37%), Positives = 77/145 (53%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LPD I  L+SL  L +S+N +  +P  IG L  L  L    NR+++L +++G+  
Sbjct: 231 NKLERLPDEISGLASLTDLVISQNLLEVLPDGIGKLRKLSILKADQNRLVQLTEAVGECE 290

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+  LP ++ +L +L  L+   N L SLP  IG   SL    V  N L  
Sbjct: 291 SLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFSVRDNRLSR 350

Query: 223 LPHTIGQCSSLRELRVDYNRLKALP 247
           +P  + Q + L  L V  NRL  LP
Sbjct: 351 IPSEVSQATELHVLDVAGNRLLHLP 375



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 68/121 (56%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L+     L +++G+  SL  L L+EN+++ +P +IG L  L  L+   N+++ LP  
Sbjct: 276 QNRLVQ----LTEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPKE 331

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL    +R N++S +P  +S+   L  LD+  N L  LP S+ +L  LK L +  
Sbjct: 332 IGGCCSLTVFSVRDNRLSRIPSEVSQATELHVLDVAGNRLLHLPLSLTNL-KLKALWLSD 390

Query: 218 N 218
           N
Sbjct: 391 N 391


>gi|296208241|ref|XP_002750998.1| PREDICTED: leucine-rich repeat-containing protein 40 [Callithrix
           jacchus]
          Length = 602

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 170/295 (57%), Gaps = 10/295 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L++L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N++  +     +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 152 NLKCLYLQHNELICISEGFEQLSSLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAAMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L  LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLHSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE-----KRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   ++     +RD+ T+
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATE 382



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDDGPSQRDSATETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCS-SLRE 235
               ++ L+ LD      + +PD +   +    +  +    N + E+P  + +   ++ +
Sbjct: 394 NIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQICEIPKRMVELKETVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L ++   +  +  L  L +R N +  LP  M  L  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILMKGTAAILEYLRDRI 600



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/252 (28%), Positives = 118/252 (46%), Gaps = 22/252 (8%)

Query: 90  KGTRDL--NLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           KGT+++   LQ+K+ D+     DS  + +  +    SE+R+      I  + +LK LD  
Sbjct: 356 KGTQEVLKYLQSKIKDDGPSQRDSATETAMTLP---SESRV-----NIHAIITLKMLDYS 407

Query: 148 ANRIIELPDSIGDLLS---LVYLDLRGNQISALPVALSRLVRLEE----LDLGSNNLSSL 200
             +   +PD + D +    +  ++   NQI  +P    R+V L+E    ++L  N LSS+
Sbjct: 408 DKQATLIPDEVFDAVKSNIITSVNFSKNQICEIP---KRMVELKETVSDVNLSFNKLSSI 464

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
              +  L  L  L +  N L  LP  +     L+ + + +NR K LPE + +I TLE + 
Sbjct: 465 SLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPEVLYRIFTLETIL 524

Query: 261 VRYNNIKQL-PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALP 318
           +  N +  + P  M  + +L  LD+  N+L  +P  L     L  + + GN F   RA  
Sbjct: 525 ISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAI 584

Query: 319 RSIGNLEMLEEL 330
              G   +LE L
Sbjct: 585 LMKGTAAILEYL 596


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|405965234|gb|EKC30629.1| hypothetical protein CGI_10009166 [Crassostrea gigas]
          Length = 575

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 135/254 (53%), Gaps = 2/254 (0%)

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
            L+ L L    ++  P  +   + L+ LDL  N I E+P +IG +  L  L L  N+IS 
Sbjct: 59  GLLELKLCHYHLIEFPKDVLNFTGLQHLDLSHNVIQEIPGAIGRMRRLKVLHLHDNKISR 118

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           LP  LS  + LE+++L  N LSSLP +IG+L SL+   +  N  E LPH I    +L+ L
Sbjct: 119 LPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLPHDISLLGNLKYL 178

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            V  N L  LP A+  +  L  L++  N  + LP  +  ++SL+ L +  N L ++P   
Sbjct: 179 DVHGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKALQLRGNGLANLPPDF 238

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                L ++N+  +F  L+ +P SI NL  L+ L+++ N+IR +   F   ++LRVL +Q
Sbjct: 239 DSLKQLREVNL--SFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHHFASFAKLRVLHLQ 296

Query: 357 ENPLEVPPRNIVEM 370
            N +E      V M
Sbjct: 297 GNEIEHFAEGFVHM 310



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 155/310 (50%), Gaps = 17/310 (5%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP+++     L  ++L++N + ++P  IG L SL+   L  NR   LP  I 
Sbjct: 111 LHDNKISRLPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLPHDIS 170

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L YLD+ GN +  LP ALS L +L  L+L  N    LP  +  + SLK L +  N 
Sbjct: 171 LLGNLKYLDVHGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKALQLRGNG 230

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  LP        LRE+ + +N+L+ +P ++  +  L+ L++  N I+ +    +S + L
Sbjct: 231 LANLPPDFDSLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHHFASFAKL 290

Query: 280 RELDVSFNELE------------SVPESLCFATTLVKM----NIGNNFADLRALPRSIGN 323
           R L +  NE+E            +V E+  +  T+ +M    ++  +F  L  +P  + +
Sbjct: 291 RVLHLQGNEIEHFAEGFVHMRYLNVSENRLYTLTVGRMKKLQHLNASFNQLDNIPAGLLS 350

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
              LEEL ++ N+I+V+P     L +LRVL +  N L   P+ I +M          + +
Sbjct: 351 CPKLEELKLNGNKIQVIPHEIIQLQKLRVLDLGNNELTCFPQVIDKMVKLDYFNVRGNFI 410

Query: 384 EKRDAKTQPV 393
           ++R+   + V
Sbjct: 411 KQREGSPKQV 420



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 3/91 (3%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           + V   K  + LN     +DNI   P  +     L  L L+ N+I  +P  I  L  L+ 
Sbjct: 323 LTVGRMKKLQHLNASFNQLDNI---PAGLLSCPKLEELKLNGNKIQVIPHEIIQLQKLRV 379

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           LDL  N +   P  I  ++ L Y ++RGN I
Sbjct: 380 LDLGNNELTCFPQVIDKMVKLDYFNVRGNFI 410


>gi|432848516|ref|XP_004066384.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Oryzias
           latipes]
          Length = 582

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 160/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPETIGNLA 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           S+  L LR N++SA+P +L++   LEEL+L +NN+S LP+ +  SL++L  L +  N  +
Sbjct: 285 SINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVNLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++N +  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNHINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +C   +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLAKIPEDVCGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 461 ECLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 493



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 51/314 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G LS LV+L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLSGLVTLALSENSLTSLPDSLDSLKKLRMLDLRHNKLREIPAVVYRLT 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM--------- 273
           LP  IG C+ +  L + +N L  LPE +G + ++  L +RYN +  +P ++         
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCRELEEL 312

Query: 274 ---------------------------------------SSLSSLRELDVSFNELESVPE 294
                                                  S  S++  L++  N +  +P 
Sbjct: 313 NLENNNISVLPEGLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNHINKIPF 372

Query: 295 SL-CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            +   A  L K+N+ +N   L +LP   G    + EL+++ NQ+  +P+    L  L VL
Sbjct: 373 GIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVL 430

Query: 354 RVQENPLEVPPRNI 367
            +  N L+  P  I
Sbjct: 431 ILSNNLLKKLPHGI 444



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/283 (30%), Positives = 147/283 (51%), Gaps = 37/283 (13%)

Query: 105 IEWLPDSIGKLSSLV---SLDLSENRIVAVPATIGG---LSSLKKLDLHANRIIELPDSI 158
           I  LP+  G LSSLV   SL L+ N   + P  +GG    S++  L++  N I ++P  I
Sbjct: 319 ISVLPE--GLLSSLVNLTSLTLARNCFQSYP--VGGPSQFSTIYSLNMEHNHINKIPFGI 374

Query: 159 GDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                 L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  L+SL+ LI+  
Sbjct: 375 FSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKIPEDVCGLVSLEVLILSN 434

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L++LPH IG    LREL ++ N+L+ LP  +                       + L 
Sbjct: 435 NLLKKLPHGIGNLRKLRELDLEENKLECLPNEI-----------------------AYLK 471

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
            L++L ++ N+L ++P  +   T L  + +G N   L+ LP  IG LE LEEL +++N  
Sbjct: 472 DLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LQHLPEEIGTLENLEELYLNDNPN 529

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 530 LHSLPFELALCSKLAIMSIENCPLTHLPAQIVAGGPSFIIQFL 572



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNHINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLAKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  +  L +L ELDL  N L  LP+ I  L  L+KL+
Sbjct: 418 PEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L+ LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLQHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLAIMSIENCPLTHLP 557



 Score = 45.1 bits (105), Expect = 0.077,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 63/128 (49%), Gaps = 25/128 (19%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LPT++  L+ L EL +  N+L+S+P  +   + LV + +  N   L +LP S+ +L+
Sbjct: 112 IHMLPTSIKELNQLAELYLYSNKLQSLPAEVGCLSGLVTLALSEN--SLTSLPDSLDSLK 169

Query: 326 MLEELDISNNQIRVLP-----------------------DSFRMLSRLRVLRVQENPLEV 362
            L  LD+ +N++R +P                          R LS+L +L ++EN ++ 
Sbjct: 170 KLRMLDLRHNKLREIPAVVYRLTSLTTLYLRFNRITTVEKDIRNLSKLTMLSIRENKIKQ 229

Query: 363 PPRNIVEM 370
            P  I E+
Sbjct: 230 LPAEIGEL 237


>gi|395825408|ref|XP_003785927.1| PREDICTED: protein LAP2 isoform 4 [Otolemur garnettii]
          Length = 1347

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 161/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++ +LP+  
Sbjct: 307 SFNEVEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLEILPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ DA+TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDAETQ 418



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
          Length = 1295

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 153/277 (55%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  +GSL  L  L V  N++E L 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL++L +  N L+ LPE++G +  L +L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +NF  L  LP  IGN + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSVGQLSNIRTFAADHNF--LTQLPPEIGNWKYVTVLFLHSNKLEFLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P +  ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKYLPYSFTKL-QQLTAMWLSD 400



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 160/280 (57%), Gaps = 8/280 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L  L  LD+  NN+ +L + I    SL+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L++D N+L  LP+++G + ++E L   +N I+ LP+++  LS++R    
Sbjct: 270 ESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNFLTQLPPEIGNWKYVTVLFLHSN--KLEFLPEEMGDMQKLKVINLSDNRLKYLPYSF 387

Query: 345 RMLSRLRVLRVQEN---PLEVPPRNIVEMGAQAVV--QYM 379
             L +L  + + +N   PL +P +  VE   Q  V   YM
Sbjct: 388 TKLQQLTAMWLSDNQSKPL-IPLQKEVESETQKTVLTNYM 426



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 29/337 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN    ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLFVRLVPCRCLRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIET 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           L   +S   SL++L +S N L+ +PES+     L  + I  N   L  LP SIG L  +E
Sbjct: 245 LEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDEN--QLMYLPDSIGGLTSVE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           ELD S N+I  LP S   LS +R      N L ++PP
Sbjct: 303 ELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPP 339



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 23/231 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  +G L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP--------------------- 201
            L+YLD+  N I  L   +S    L++L L SN+L  LP                     
Sbjct: 231 HLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMY 290

Query: 202 --DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
             DSIG L S+++L    N++E LP ++GQ S++R    D+N L  LP  +G    + VL
Sbjct: 291 LPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  N ++ LP  M  +  L+ +++S N L+ +P S      L  M + +N
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 21/237 (8%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLI-----KLASLIEVSSKKGT 92
           LT    L LGS  F  +VP ++  +  + +   DG +L+LI      L  LI +   K  
Sbjct: 183 LTQLERLDLGSNEF-TEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSK-- 239

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
                     +NIE L + I    SL  L LS N +  +P +IG L  L  L +  N+++
Sbjct: 240 ----------NNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM 289

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LPDSIG L S+  LD   N+I ALP ++ +L  +       N L+ LP  IG+   +  
Sbjct: 290 YLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTV 349

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L + +N LE LP  +G    L+ + +  NRLK LP +  K+  L  + +  N  K L
Sbjct: 350 LFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDNQSKPL 406



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)

Query: 220 LEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LE++P  I     +L EL +D N+++ LP+ +    +L  LS+  N++  LP ++++L +
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELDVS N ++  PE+                         I N ++L  ++ S N I 
Sbjct: 94  LRELDVSKNGIQEFPEN-------------------------IKNCKVLAIVEASVNPIS 128

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPD F  L  L  L + +  LE  P N 
Sbjct: 129 KLPDGFSQLLNLTQLYLNDAFLEFLPANF 157



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI      A+V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129


>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
 gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
          Length = 682

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/294 (30%), Positives = 154/294 (52%), Gaps = 14/294 (4%)

Query: 77  LIKLASLIEVSSKKGTRDLNLQNKLMDNIEWL----------PDSIGKLSSLVSLDLSEN 126
           L KL+ L  VSS+   +D++ Q + +  +EWL          P+ I KL SL  L L +N
Sbjct: 262 LTKLSFLSVVSSE--LKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDN 319

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVR 186
           +I  +P  IG L  L +L L  N+I ELP  I +L +L  L L  N+ ++ P+ ++ L  
Sbjct: 320 QITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITNLEN 379

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L+EL L  N ++ LP  I +L  L+ L +  N  EELP  I + + L+ L++++N+L++L
Sbjct: 380 LKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNKLESL 439

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           P  +  +  LE L + YN +   P  +    +L  L +  +EL+++P+ +     +  +N
Sbjct: 440 PNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKKIRMLN 499

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + +N       P  I   + +  L + +N+I  +P+    L R+ VL +  N L
Sbjct: 500 LDSN--RFEVFPIEILEFQKISYLSLDDNKISSIPNEISKLKRMYVLSLSRNKL 551



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D+I KL+ L  L +  + +  +   +  L  L+ L    N +IE P+ I  L SL  L L
Sbjct: 257 DAISKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELML 316

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQI+ +P  +  L +L  L L  N +S LP  I  L +L++L +  N     P  I  
Sbjct: 317 DDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITN 376

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L+EL++  N++  LP  +  +  LE L + +N  ++LPT +  L+ L+ L ++ N+L
Sbjct: 377 LENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNKL 436

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
           ES+P ++     L ++++G N   L + P  I   E L  L +  ++++ LP     L +
Sbjct: 437 ESLPNTISILDKLEELDLGYN--RLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKK 494

Query: 350 LRVLRVQENPLEVPPRNIVEM 370
           +R+L +  N  EV P  I+E 
Sbjct: 495 IRMLNLDSNRFEVFPIEILEF 515



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 140/299 (46%), Gaps = 26/299 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E  P  +  L +L SL L  N+    P  +  + SLKKLD+  N I ++ +SI +L+
Sbjct: 134 NKLEHFPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLI 193

Query: 163 SLVYLDLRG-----------------------NQISALPVALSRLVRLEELDLGSNNLSS 199
            L  LD+ G                       NQ+  +P  + +L  LEELD+G N+ S+
Sbjct: 194 ELEELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSN 253

Query: 200 LP-DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
              D+I  L  L  L V +++L+++   +     L  L   YN L   P  + K+ +L+ 
Sbjct: 254 GSLDAISKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKE 313

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  N I  +P  + +L  L  L +  N++  +P  +     L ++ + +N     + P
Sbjct: 314 LMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDN--KFTSFP 371

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
             I NLE L+EL +S N+I  LP     L +L  L +  N  E  P  I+E+    V+Q
Sbjct: 372 MQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQ 430



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/287 (27%), Positives = 136/287 (47%), Gaps = 26/287 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG L  L +L L+ +    +P  I  L++LK L L +N++   P  +  L +L  L
Sbjct: 93  IPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEHFPPQLLTLKNLTSL 152

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+    PV ++ +  L++LD+ +N +  + +SI +LI L++L +   +L E P  I
Sbjct: 153 SLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELDISGMELTEFPLEI 212

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN---------------------- 265
              + LR L V  N+LK +P+ + K+  LE L + +N+                      
Sbjct: 213 VGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDAISKLTKLSFLSVVS 272

Query: 266 --IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
             +K +   + +L  L  L  S+NEL   P  +    +L ++ + +N   +  +P  IGN
Sbjct: 273 SELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDN--QITTIPNEIGN 330

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L  L +  N+I  LP     L  L  LR+ +N     P  I  +
Sbjct: 331 LKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITNL 377



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 124/278 (44%), Gaps = 46/278 (16%)

Query: 139 SSLKKLDLHANRII-ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           S + KL    N +  ++P  IG+L+ L  L L  +    +P+ +++L  L+ L L SN L
Sbjct: 77  SKITKLYFFGNNLTGKIPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKL 136

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
              P  + +L +L  L +  N  +  P  +    SL++L +D N +K + E++  +  LE
Sbjct: 137 EHFPPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELE 196

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN------- 310
            L +    + + P  +  L+ LR L+VS N+L+++P+ +   T L +++IG N       
Sbjct: 197 ELDISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSL 256

Query: 311 --------------------------------------FADLRALPRSIGNLEMLEELDI 332
                                                 + +L   P  I  L+ L+EL +
Sbjct: 257 DAISKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELML 316

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +NQI  +P+    L +L  L ++EN +   P  I E+
Sbjct: 317 DDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISEL 354


>gi|410917029|ref|XP_003971989.1| PREDICTED: leucine-rich repeat protein SHOC-2-like isoform 1
           [Takifugu rubripes]
          Length = 582

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 158/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L SLV+LD++ N++  +P  IG  + +  LDL  N +++LP++IG+L 
Sbjct: 225 NKIKQLPAEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLA 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           S+  L LR N++SA+P +L++   LEEL+L +NN+S LP+ +  SL+ L  L +  N  +
Sbjct: 285 SINRLGLRYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++N +  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 SYP--VGGPSQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +C   +L  + + NN   L+ LP  IGNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVCGLVSLEVLILSNNL--LKKLPHGIGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ECLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 102/327 (31%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP  IG  + + +LDL  N ++ +P TIG L+S+ +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRLGLRYNRLSAIPRSLAKCR 307

Query: 163 SLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLIS------------ 209
            L  L+L  N IS LP  L S LV+L  L L  N   S P    S  S            
Sbjct: 308 ELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGPSQFSTIYSLNMEHNCI 367

Query: 210 -------------LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
                        L KL ++ N L  LP   G  +S+ EL +  N+L  +PE V  + +L
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVCGLVSL 427

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA----------------- 299
           EVL +  N +K+LP  + +L  LRELD+  N+LE +P  + +                  
Sbjct: 428 EVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 300 ------TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
                 T L  + +G N   L+ LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LQNLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/335 (28%), Positives = 142/335 (42%), Gaps = 74/335 (22%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP SI +L+ L  L L  N++ ++PA +G LSSL  L L  N +  LPDS+  L  L
Sbjct: 112 IHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSENSLTSLPDSLDSLKKL 171

Query: 165 VYLDLRGNQISALPVA-----------------------LSRLVRLEELDLGSNNLSSLP 201
             LDLR N++  +P                         +  L +L  L +  N +  LP
Sbjct: 172 QMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSIRENKIKQLP 231

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
             IG L SL  L V  N LE LP  IG C+ +  L + +N L  LPE +G + ++  L +
Sbjct: 232 AEIGELCSLVTLDVAHNQLEHLPKEIGNCTKITNLDLQHNELLDLPETIGNLASINRLGL 291

Query: 262 RYNNIKQLPTT------------------------MSSLSSLRELDVSFNELESVP---- 293
           RYN +  +P +                        +SSL  L  L ++ N  +S P    
Sbjct: 292 RYNRLSAIPRSLAKCRELEELNLENNNISVLPEGLLSSLVKLTSLTLARNCFQSYPVGGP 351

Query: 294 -----------ESLCF----------ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDI 332
                      E  C           A  L K+N+ +N   L +LP   G    + EL++
Sbjct: 352 SQFSTIYSLNMEHNCINKIPFGIFSRAKVLSKLNMKDN--QLTSLPLDFGTWTSMVELNL 409

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + NQ+  +P+    L  L VL +  N L+  P  I
Sbjct: 410 ATNQLTKIPEDVCGLVSLEVLILSNNLLKKLPHGI 444



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNCINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  +  L +L ELDL  N L  LP+ I  L  L+KL+
Sbjct: 418 PEDVCGLVSLEVLILSNNLLKKLPHGIGNLRKLRELDLEENKLECLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L+ LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLQNLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 48.9 bits (115), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 25/135 (18%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LPT++  L+ L EL +  N+L+S+P  L   ++LV + +  N   L +LP
Sbjct: 105 LDLSKRSIHMLPTSIKELTQLAELYLYSNKLQSLPAELGCLSSLVTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLP-----------------------DSFRMLSRLRVLRV 355
            S+ +L+ L+ LD+ +N++R +P                          R LS+L +L +
Sbjct: 163 DSLDSLKKLQMLDLRHNKLREIPAVVYRLTTLTTLYLRFNRITTVEKDIRHLSKLTMLSI 222

Query: 356 QENPLEVPPRNIVEM 370
           +EN ++  P  I E+
Sbjct: 223 RENKIKQLPAEIGEL 237


>gi|395825404|ref|XP_003785925.1| PREDICTED: protein LAP2 isoform 2 [Otolemur garnettii]
          Length = 1420

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLEILPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 161/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLTSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++ +LP+  
Sbjct: 307 SFNEVEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLEILPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ DA+TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDAETQ 418



 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLTSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NEVEALPSSVGQLTNIRTFAADHNYLQQLPP 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG  +S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLTSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLEILPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
 gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
          Length = 602

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 174/308 (56%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ +  L +L+KL++  N++   P+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQSESAAETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD + + +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILIKGTAAILEYLRDRI 600


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 131 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 190

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 191 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 250

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 251 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAA 310

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 311 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 368

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 369 TKLQQLTAMWLSDN 382



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 138/264 (52%), Gaps = 3/264 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP SI  L +L  LD+S+N I   P  I     L  ++   N I +LPD    LL
Sbjct: 60  NDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLL 119

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L + +N+  E
Sbjct: 120 NLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTE 179

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S+  +L++L
Sbjct: 180 VPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDL 239

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S N++  LP 
Sbjct: 240 LLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSFNEVEALPS 297

Query: 343 SFRMLSRLRVLRVQENPL-EVPPR 365
           S   L+ +R      N L ++PP 
Sbjct: 298 SVGQLTNIRTFAADHNYLQQLPPE 321



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 108 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 167

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 168 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 227

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 228 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 287

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 288 SFNEVEALPSSVGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 345

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 346 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 399



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 152 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 211

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 212 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 271

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + S  ++  L
Sbjct: 272 LPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 331

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 332 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 387



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 136/268 (50%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + IE LP  +    SL  L L +N +  +PA+I  L +L++LD+  N I E P++I +  
Sbjct: 37  NQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCK 96

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  ++   N IS LP   S+L+ L +L L    L  LP + G L  L+ L +  N L+ 
Sbjct: 97  VLTVVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKM 156

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP T+ + + L  L +  N    +PE + ++  L+   +  N +  +P  + SL  L  L
Sbjct: 157 LPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYL 216

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N +E + E +     L  + + +N   L+ LP +IG+L+ +  L I  NQ+  LPD
Sbjct: 217 DVSKNNIEMIEEGISACENLQDLLLSSN--SLQQLPETIGSLKNVTTLKIDENQLMYLPD 274

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           S   L  +  L    N +E  P ++ ++
Sbjct: 275 SIGGLVSIEELDCSFNEVEALPSSVGQL 302



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 8   LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 65

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 66  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 110


>gi|426329995|ref|XP_004026013.1| PREDICTED: leucine-rich repeat-containing protein 40 [Gorilla
           gorilla gorilla]
          Length = 602

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/308 (31%), Positives = 176/308 (57%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKTLPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N+L+++P S  SL SL +L + +N+L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNHLTTVPASFSSLSSLVRLNLSSNELKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +  N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLWRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREILSKGTQEVLKYLRSKI-KDDGPSQSESATETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 142/320 (44%), Gaps = 48/320 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L  L +L L
Sbjct: 283 EHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL-HLKFLAL 341

Query: 170 RGNQI--------------------------------SALPVALS----------RLVRL 187
            GN +                                SA   A++           ++ L
Sbjct: 342 EGNPLRTIRREILSKGTQEVLKYLRSKIKDDGPSQSESATETAMTLPSESRVNIHAIITL 401

Query: 188 EELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RELRVDYNRL 243
           + LD      + +PD +   +    +  +    N L E+P  + +   +  ++ + +N+L
Sbjct: 402 KILDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVDLSFNKL 461

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE L    TL 
Sbjct: 462 SFISLELCVLQKLTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIFTLE 521

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            + I NN       P+ +  +E L  LD+ NN +  +P        LR L +  NP  VP
Sbjct: 522 TILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVP 580

Query: 364 PRNIVEMGAQAVVQYMADLV 383
              I+  G  A+++Y+ D +
Sbjct: 581 RAAILMKGTAAILEYLRDRI 600



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 87/186 (46%), Gaps = 31/186 (16%)

Query: 108 LPDSIG---KLSSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLS 163
           +PD +    K + + S++ S+N++  +P  +  L  +   +DL  N++  +   +  L  
Sbjct: 414 IPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSDVDLSFNKLSFISLELCVLQK 473

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV-------- 215
           L +LDLR N +++LP  +  LVRL+ ++L  N    LP+ +  + +L+ +++        
Sbjct: 474 LTFLDLRNNFLNSLPEEMKSLVRLQTINLSFNRFKMLPEVLYHIFTLETILISNNQVGSV 533

Query: 216 ----------------ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTL 256
                           + NDL ++P  +G C +LR L +D N  +    A+   G    L
Sbjct: 534 DPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAIL 593

Query: 257 EVLSVR 262
           E L  R
Sbjct: 594 EYLRDR 599


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|126650300|ref|ZP_01722528.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
 gi|126592950|gb|EAZ86932.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
          Length = 289

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/270 (32%), Positives = 162/270 (60%), Gaps = 8/270 (2%)

Query: 75  LSLIKLASLIEV--SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVP 132
           L+ +KL +L +   S  KG +DLNL +   +++  +P  I +++S+  L++S N+I  +P
Sbjct: 10  LAQMKLKTLPDFNGSQIKGIKDLNLYD---NDLREIPTEIFQMTSIEILNISVNKINNLP 66

Query: 133 ATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV-YLDLRGNQISALPVALSRLVRLEELD 191
           A I  L +L+ LD   N I  +P  IG L+++  YL    NQ+ ++P  + +L ++  L+
Sbjct: 67  AEITNLKNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYLN 126

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L  N LS LP+ IG+L  L +L +  N L ELP ++ + ++LREL +  N + +LPE +G
Sbjct: 127 LSDNLLSGLPEEIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEKIG 186

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L VL +  N ++++P ++ +   LR L++  N+L+++P S+     L+++++ +N 
Sbjct: 187 ELALLRVLELEDNQLQEVPDSLHTCIKLRRLNLRQNKLKTLPASIGQLKNLIELDLRSN- 245

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            DL+ LP S+  +E LE LD+  N    +P
Sbjct: 246 -DLKELPESLLAMESLERLDLRWNHELKIP 274



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 150/274 (54%), Gaps = 4/274 (1%)

Query: 108 LPDSIG-KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           LPD  G ++  +  L+L +N +  +P  I  ++S++ L++  N+I  LP  I +L +L  
Sbjct: 18  LPDFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVNKINNLPAEITNLKNLRM 77

Query: 167 LDLRGNQISALPVALSRLVRLEE-LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           LD   N I  +P  +  LV +E+ L    N L S+P  IG L  ++ L +  N L  LP 
Sbjct: 78  LDAGHNHIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYLNLSDNLLSGLPE 137

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            IG  + L ELR+  NRL  LPE++ ++  L  L ++ N++  LP  +  L+ LR L++ 
Sbjct: 138 EIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEKIGELALLRVLELE 197

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L+ VP+SL     L ++N+  N   L+ LP SIG L+ L ELD+ +N ++ LP+S  
Sbjct: 198 DNQLQEVPDSLHTCIKLRRLNLRQN--KLKTLPASIGQLKNLIELDLRSNDLKELPESLL 255

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            +  L  L ++ N     P  + E+ A+  + Y+
Sbjct: 256 AMESLERLDLRWNHELKIPSWLDELEARGCIVYL 289



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 134/254 (52%), Gaps = 27/254 (10%)

Query: 119 VSLDLSENRIVAVPATIGG-LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           + ++L++ ++  +P   G  +  +K L+L+ N + E+P  I  + S+  L++  N+I+ L
Sbjct: 6   MKINLAQMKLKTLPDFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVNKINNL 65

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK-LIVETNDLEELPHTIGQCSSLREL 236
           P  ++ L  L  LD G N++  +P  IG L++++  L    N L+ +P  IGQ + +R L
Sbjct: 66  PAEITNLKNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYL 125

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  N L  LPE +G ++ L  L +  N + +LP ++  L++LREL +  N + S+PE  
Sbjct: 126 NLSDNLLSGLPEEIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEK- 184

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                                   IG L +L  L++ +NQ++ +PDS     +LR L ++
Sbjct: 185 ------------------------IGELALLRVLELEDNQLQEVPDSLHTCIKLRRLNLR 220

Query: 357 ENPLEVPPRNIVEM 370
           +N L+  P +I ++
Sbjct: 221 QNKLKTLPASIGQL 234



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/191 (31%), Positives = 102/191 (53%), Gaps = 4/191 (2%)

Query: 189 ELDLGSNNLSSLPDSIGSLI-SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALP 247
           +++L    L +LPD  GS I  +K L +  NDL E+P  I Q +S+  L +  N++  LP
Sbjct: 7   KINLAQMKLKTLPDFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVNKINNLP 66

Query: 248 EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE-LDVSFNELESVPESLCFATTLVKMN 306
             +  +  L +L   +N+I  +P  +  L ++ + L    N+L+S+P  +   T +  +N
Sbjct: 67  AEITNLKNLRMLDAGHNHIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYLN 126

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
           + +N   L  LP  IGNL  L EL I NN++  LP+S   L+ LR L +++N +   P  
Sbjct: 127 LSDNL--LSGLPEEIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEK 184

Query: 367 IVEMGAQAVVQ 377
           I E+    V++
Sbjct: 185 IGELALLRVLE 195



 Score = 44.3 bits (103), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 8/79 (10%)

Query: 93  RDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           R LNL QNKL    + LP SIG+L +L+ LDL  N +  +P ++  + SL++LDL  N  
Sbjct: 215 RRLNLRQNKL----KTLPASIGQLKNLIELDLRSNDLKELPESLLAMESLERLDLRWNHE 270

Query: 152 IELPDSIGDLLS---LVYL 167
           +++P  + +L +   +VYL
Sbjct: 271 LKIPSWLDELEARGCIVYL 289


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 144/284 (50%), Gaps = 27/284 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L +L+LS N++  +P+ IG L SL   DL  N++ +LP  IG+L +L  L
Sbjct: 31  LPSEITELKNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQLPPEIGELKNLTIL 90

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           ++  NQ+  L   ++ L  L  LDL  N L+ LP  IG L +LK L   +N L +LP  I
Sbjct: 91  NVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEI 150

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +  +L EL +  N +  LP  + ++  L  L+V  N + QLP+ ++ L +L++LD+S N
Sbjct: 151 TKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKITELKNLKKLDLSRN 210

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L                           LP  I  L+ L  LD+S NQ+  LP     L
Sbjct: 211 QLAQ-------------------------LPPEIAELKNLTTLDLSRNQLAQLPPEIAEL 245

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM--ADLVEKRDAK 389
             L  L + ENPL   P  IV  G +A+  Y+  +   E  +AK
Sbjct: 246 KNLTTLDLFENPLISLPPEIVSQGVKAIFTYLKQSKTTENNEAK 289



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 115/232 (49%), Gaps = 26/232 (11%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLK-- 142
           E++  K    LNL     + +  LP  IG+L SL S DLS N++  +P  IG L +L   
Sbjct: 34  EITELKNLTTLNLSG---NQLTQLPSEIGELKSLTSFDLSVNQLTQLPPEIGELKNLTIL 90

Query: 143 ---------------------KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
                                 LDL  N++ +LP  IG+L +L  L    NQ++ LP+ +
Sbjct: 91  NVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEI 150

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           ++L  L EL L SN +  LP  I  L +L  L V  N L +LP  I +  +L++L +  N
Sbjct: 151 TKLKNLTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKITELKNLKKLDLSRN 210

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           +L  LP  + ++  L  L +  N + QLP  ++ L +L  LD+  N L S+P
Sbjct: 211 QLAQLPPEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFENPLISLP 262



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 93/171 (54%), Gaps = 1/171 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I+ LP+ I +L +L +LDLS N++  +P  IG L++LK L   +N++ +LP  I  L +L
Sbjct: 98  IQLLPE-ITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEITKLKNL 156

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N +  LP+ ++ L  L  L++  N L  LP  I  L +LKKL +  N L +LP
Sbjct: 157 TELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKITELKNLKKLDLSRNQLAQLP 216

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             I +  +L  L +  N+L  LP  + ++  L  L +  N +  LP  + S
Sbjct: 217 PEIAELKNLTTLDLSRNQLAQLPPEIAELKNLTTLDLFENPLISLPPEIVS 267


>gi|27819907|gb|AAL39806.2| LD43989p, partial [Drosophila melanogaster]
          Length = 1581

 Score =  133 bits (335), Expect = 2e-28,   Method: Composition-based stats.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 7   LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 66

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 67  GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 126

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 127 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 186

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 187 HVLDVSGNQLLYLPYSL 203



 Score =  119 bits (297), Expect = 4e-24,   Method: Composition-based stats.
 Identities = 92/303 (30%), Positives = 148/303 (48%), Gaps = 27/303 (8%)

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISAL 177
           L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L YLD+  N++  L
Sbjct: 2   LKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEEL 61

Query: 178 PVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELR 237
           P  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L  T+G C +++EL 
Sbjct: 62  PNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELI 121

Query: 238 VDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +  N+L+ +P  L 
Sbjct: 122 LTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELG 181

Query: 298 FATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL----PDS---------- 343
             T L  +++  N   L  LP S+ NL+ L+ + +S NQ + L    PD+          
Sbjct: 182 NCTVLHVLDVSGN--QLLYLPYSLVNLQ-LKAVWLSENQSQPLLTFQPDTDAETGEQVLS 238

Query: 344 --------FRMLSRLRVLRVQENPLE--VPPRNIVEMGAQAVVQYMADLVEKRDAKTQPV 393
                   ++ ++  R L     P E   P R +V+   +A  +     V +     + +
Sbjct: 239 CYLLPQQEYQPITPARDLESDSEPFEEREPSRTVVKFSEEATQEKETPFVRQNTPHPKDL 298

Query: 394 KQK 396
           K K
Sbjct: 299 KAK 301



 Score =  115 bits (287), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 71/174 (40%), Positives = 95/174 (54%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L+ L  LD+SENR+  +P  I GL SL  LDL  N +  LPD I  L 
Sbjct: 33  NQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLS 92

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L L  N++  L   L     ++EL L  N LS LP SIG +  L  L V+ N LE 
Sbjct: 93  RLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEY 152

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL 276
           LP  IGQC++L  L +  N+LK LP  +G    L VL V  N +  LP ++ +L
Sbjct: 153 LPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL 206



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 57/180 (31%), Positives = 95/180 (52%), Gaps = 3/180 (1%)

Query: 186 RLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKA 245
           +L+ LDLG N +  LP  +G L  L +L ++ N L+ LP  +G  + L  L V  NRL+ 
Sbjct: 1   KLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEE 60

Query: 246 LPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKM 305
           LP  +  + +L  L +  N ++ LP  ++ LS L  L +  N L+ + ++L     + ++
Sbjct: 61  LPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQEL 120

Query: 306 NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
            +  NF  L  LP SIG +  L  L++  N +  LP      + L VL +++N L ++PP
Sbjct: 121 ILTENF--LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPP 178



 Score = 40.8 bits (94), Expect = 1.2,   Method: Composition-based stats.
 Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 1/80 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN  N   + +E+LP  IG+ ++L  L L +N++  +P  +G  + L  LD+  N+++ L
Sbjct: 140 LNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYL 199

Query: 155 PDSIGDL-LSLVYLDLRGNQ 173
           P S+ +L L  V+L    +Q
Sbjct: 200 PYSLVNLQLKAVWLSENQSQ 219


>gi|54607112|ref|NP_067538.2| protein LAP2 isoform 2 [Mus musculus]
          Length = 1376

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|219519899|gb|AAI45499.1| Erbb2ip protein [Mus musculus]
          Length = 1411

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|260803177|ref|XP_002596467.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
 gi|229281724|gb|EEN52479.1| hypothetical protein BRAFLDRAFT_243711 [Branchiostoma floridae]
          Length = 933

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 171/331 (51%), Gaps = 31/331 (9%)

Query: 93  RDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           ++LN+ QNK    I  +PD+I KL  L  L +  N++  +P T+G LS L++L +  N +
Sbjct: 45  KELNISQNK----IAVVPDNIEKLWQLTDLLMDHNQLSFLPETLGNLSQLRELRVQGNPL 100

Query: 152 IELPD-----------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
             +P+           S+G+ L L   D  G  IS LP  +++L  L  + +    L+SL
Sbjct: 101 ACVPECIKKLKRLQSLSLGNFLGLGQED--GYTISELPEDVAKLNLLTIMTVRGGILTSL 158

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           PD+ G+L  LK+L    N   E+P  + + S+L +L + YNRL  LP  V K+  L+ + 
Sbjct: 159 PDTFGTL-RLKELDFSFNLFAEIPKQVIEVSTLEKLNLCYNRLTNLPGDVHKLQKLKTMI 217

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
           +  N IK+LP +   LS L  L++  N+L ++P+ +    +L  + +  N  D   LP  
Sbjct: 218 LYGNEIKELPPSALKLSRLVMLNLDHNQLTTLPDDIGKLESLEYLLMSGNNMDF--LPEG 275

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRL---RVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           +  L+ L  L+IS+N + VLP  F  L RL   R L    NPL  PPR I + G  A+  
Sbjct: 276 LCTLKSLFHLNISDNNVEVLPADFGKLPRLKSARHLHTHGNPLVQPPRRICDAGMVAIRS 335

Query: 378 YMADLVEKRDAKTQPVKQKKSWVEMCFFSRS 408
           Y   L      +T+ V+  +  +++C F  S
Sbjct: 336 YQEQL-----QRTEVVRTPR--IKLCVFGDS 359


>gi|386766575|ref|NP_733155.2| scribbled, isoform P [Drosophila melanogaster]
 gi|383292969|gb|AAN14077.2| scribbled, isoform P [Drosophila melanogaster]
          Length = 1729

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQN--RLQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSEN--RLEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|341940994|sp|Q80TH2.3|LAP2_MOUSE RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
          Length = 1402

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|6782322|emb|CAB70601.1| Vartul-1 protein [Drosophila melanogaster]
          Length = 1756

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           K   R +   NK   ++  +P+ I + S +L  L L  N I  +P     L  L+KL L 
Sbjct: 9   KGCNRQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLS 68

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
            N I  LP  I +  +LV LD+  N I  +P  +  L  L+  D  SN +  LP     L
Sbjct: 69  DNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQL 128

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L  L +    L  LP   G  + L  L +  N LK LPE + ++  L+ L +  N I+
Sbjct: 129 KNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE 188

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L  L EL +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L
Sbjct: 189 DLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSL 246

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            +LD++ N +  LPD    LSRL +L++ +N L+
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQ 280



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK+L L AN I +LP +   L  L  L L  N+I  LP  +     L ELD+  N++  
Sbjct: 38  TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPD 97

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +PD I  L SL+     +N + +LP    Q  +L  L ++   L  LP   G +  LE L
Sbjct: 98  IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL 157

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +K LP T+S L+ L+ LD+  NE+E +P  L +   L ++ + +N   L+ LP 
Sbjct: 158 ELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHN--QLQRLPP 215

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +G L  L  LD+S N++  LP+    L  L  L + +N LE  P  I ++
Sbjct: 216 ELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKL 266


>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
          Length = 1363

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/277 (31%), Positives = 153/277 (55%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  +GSL  L  L V  N++E L 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL++L +  N L+ LPE++G +  L +L +  N +  LP ++  L+S+ ELD 
Sbjct: 247 EGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +NF  L  LP  IGN + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSVGQLSNIRTFAADHNF--LTQLPPEIGNWKYVTVLFLHSNKLEFLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P +  ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKYLPYSFTKL-QQLTAMWLSD 400



 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 160/280 (57%), Gaps = 8/280 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L  L  LD+  NN+ +L + I    SL+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            +IG    L  L++D N+L  LP+++G + ++E L   +N I+ LP+++  LS++R    
Sbjct: 270 ESIGCLKKLAILKIDENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNFLTQLPPEIGNWKYVTVLFLHSN--KLEFLPEEMGDMQKLKVINLSDNRLKYLPYSF 387

Query: 345 RMLSRLRVLRVQEN---PLEVPPRNIVEMGAQAVV--QYM 379
             L +L  + + +N   PL +P +  VE   Q  V   YM
Sbjct: 388 TKLQQLTAMWLSDNQSKPL-IPLQKEVESETQKTVLTNYM 426



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 110/337 (32%), Positives = 162/337 (48%), Gaps = 29/337 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN    ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLFVRLVPCRCLRGEEETVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIET 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           L   +S   SL++L +S N L+ +PES+     L  + I  N   L  LP SIG L  +E
Sbjct: 245 LEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDEN--QLMYLPDSIGGLTSVE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           ELD S N+I  LP S   LS +R      N L ++PP
Sbjct: 303 ELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPP 339



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/231 (30%), Positives = 114/231 (49%), Gaps = 23/231 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  +G L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP--------------------- 201
            L+YLD+  N I  L   +S    L++L L SN+L  LP                     
Sbjct: 231 HLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLMY 290

Query: 202 --DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
             DSIG L S+++L    N++E LP ++GQ S++R    D+N L  LP  +G    + VL
Sbjct: 291 LPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVL 350

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
            +  N ++ LP  M  +  L+ +++S N L+ +P S      L  M + +N
Sbjct: 351 FLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDN 401



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 21/237 (8%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLI-----KLASLIEVSSKKGT 92
           LT    L LGS  F  +VP ++  +  + +   DG +L+LI      L  LI +   K  
Sbjct: 183 LTQLERLDLGSNEF-TEVPEVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSK-- 239

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
                     +NIE L + I    SL  L LS N +  +P +IG L  L  L +  N+++
Sbjct: 240 ----------NNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKIDENQLM 289

Query: 153 ELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKK 212
            LPDSIG L S+  LD   N+I ALP ++ +L  +       N L+ LP  IG+   +  
Sbjct: 290 YLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGNWKYVTV 349

Query: 213 LIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L + +N LE LP  +G    L+ + +  NRLK LP +  K+  L  + +  N  K L
Sbjct: 350 LFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKYLPYSFTKLQQLTAMWLSDNQSKPL 406



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 72/149 (48%), Gaps = 26/149 (17%)

Query: 220 LEELPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
           LE++P  I     +L EL +D N+++ LP+ +    +L  LS+  N++  LP ++++L +
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           LRELDVS N ++  PE+                         I N ++L  ++ S N I 
Sbjct: 94  LRELDVSKNGIQEFPEN-------------------------IKNCKVLAIVEASVNPIS 128

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            LPD F  L  L  L + +  LE  P N 
Sbjct: 129 KLPDGFSQLLNLTQLYLNDAFLEFLPANF 157



 Score = 42.0 bits (97), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI      A+V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISK 129


>gi|148686562|gb|EDL18509.1| Erbb2 interacting protein [Mus musculus]
 gi|219519902|gb|AAI45510.1| Erbb2ip protein [Mus musculus]
          Length = 1402

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|348553821|ref|XP_003462724.1| PREDICTED: protein LAP2-like isoform 4 [Cavia porcellus]
          Length = 1370

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N  +L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSNKLEL--LPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|187954433|gb|AAI41179.1| Erbb2ip protein [Mus musculus]
          Length = 1294

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (312), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|340367867|ref|XP_003382474.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Amphimedon queenslandica]
          Length = 470

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/241 (37%), Positives = 131/241 (54%), Gaps = 4/241 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           +D+S   +   P  IG + +    L+L  NR+  +P+ IG L  L  L L+ N ++ +P 
Sbjct: 128 VDISYCNLKKCPPNIGSIGTFTASLNLSNNRLSFVPEDIGSLSGLEELFLQYNHLAMIPS 187

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ++  L  L ELDL +NNL+SLP+ IGSL  L  L V  N +  LP +IG+  +L EL + 
Sbjct: 188 SICHLSFLRELDLKNNNLTSLPNEIGSLSLLNILCVTNNRISSLPSSIGKLRNLEELTLH 247

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA 299
            N L  LP  +  +  L++L    N ++ LP     L  L ELD S  EL  +PES    
Sbjct: 248 SNELAHLPSEICLLKDLKLLYCGDNKLQSLPDQFGKLVKLEELDFSGCELVKLPESFSNC 307

Query: 300 TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP 359
            +L+++ + NN   L  LP  IGNL  L+EL +  N+IR+ P S R L+ L     QENP
Sbjct: 308 KSLIRVWLCNN--RLVQLPVQIGNLVNLKELHVRKNKIRMFPMSMRSLT-LYTFTAQENP 364

Query: 360 L 360
           +
Sbjct: 365 I 365



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/205 (37%), Positives = 110/205 (53%), Gaps = 3/205 (1%)

Query: 92  TRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           T  LNL N   + + ++P+ IG LS L  L L  N +  +P++I  LS L++LDL  N +
Sbjct: 149 TASLNLSN---NRLSFVPEDIGSLSGLEELFLQYNHLAMIPSSICHLSFLRELDLKNNNL 205

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
             LP+ IG L  L  L +  N+IS+LP ++ +L  LEEL L SN L+ LP  I  L  LK
Sbjct: 206 TSLPNEIGSLSLLNILCVTNNRISSLPSSIGKLRNLEELTLHSNELAHLPSEICLLKDLK 265

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L    N L+ LP   G+   L EL      L  LPE+     +L  + +  N + QLP 
Sbjct: 266 LLYCGDNKLQSLPDQFGKLVKLEELDFSGCELVKLPESFSNCKSLIRVWLCNNRLVQLPV 325

Query: 272 TMSSLSSLRELDVSFNELESVPESL 296
            + +L +L+EL V  N++   P S+
Sbjct: 326 QIGNLVNLKELHVRKNKIRMFPMSM 350



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 73/193 (37%), Positives = 104/193 (53%), Gaps = 3/193 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           ++ S  G  +L LQ    +++  +P SI  LS L  LDL  N + ++P  IG LS L  L
Sbjct: 165 DIGSLSGLEELFLQ---YNHLAMIPSSICHLSFLRELDLKNNNLTSLPNEIGSLSLLNIL 221

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +  NRI  LP SIG L +L  L L  N+++ LP  +  L  L+ L  G N L SLPD  
Sbjct: 222 CVTNNRISSLPSSIGKLRNLEELTLHSNELAHLPSEICLLKDLKLLYCGDNKLQSLPDQF 281

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L+ L++L     +L +LP +   C SL  + +  NRL  LP  +G +  L+ L VR N
Sbjct: 282 GKLVKLEELDFSGCELVKLPESFSNCKSLIRVWLCNNRLVQLPVQIGNLVNLKELHVRKN 341

Query: 265 NIKQLPTTMSSLS 277
            I+  P +M SL+
Sbjct: 342 KIRMFPMSMRSLT 354



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/147 (34%), Positives = 83/147 (56%), Gaps = 3/147 (2%)

Query: 219 DLEELPHTIGQCSSLR-ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           +L++ P  IG   +    L +  NRL  +PE +G +  LE L ++YN++  +P+++  LS
Sbjct: 134 NLKKCPPNIGSIGTFTASLNLSNNRLSFVPEDIGSLSGLEELFLQYNHLAMIPSSICHLS 193

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            LRELD+  N L S+P  +   + L  + + NN   + +LP SIG L  LEEL + +N++
Sbjct: 194 FLRELDLKNNNLTSLPNEIGSLSLLNILCVTNN--RISSLPSSIGKLRNLEELTLHSNEL 251

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPP 364
             LP    +L  L++L   +N L+  P
Sbjct: 252 AHLPSEICLLKDLKLLYCGDNKLQSLP 278



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/135 (34%), Positives = 71/135 (52%), Gaps = 3/135 (2%)

Query: 235 ELRVDYNRLKALPEAVGKIHTLEV-LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           E+ + Y  LK  P  +G I T    L++  N +  +P  + SLS L EL + +N L  +P
Sbjct: 127 EVDISYCNLKKCPPNIGSIGTFTASLNLSNNRLSFVPEDIGSLSGLEELFLQYNHLAMIP 186

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
            S+C  + L ++++ NN  +L +LP  IG+L +L  L ++NN+I  LP S   L  L  L
Sbjct: 187 SSICHLSFLRELDLKNN--NLTSLPNEIGSLSLLNILCVTNNRISSLPSSIGKLRNLEEL 244

Query: 354 RVQENPLEVPPRNIV 368
            +  N L   P  I 
Sbjct: 245 TLHSNELAHLPSEIC 259


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 164/278 (58%), Gaps = 5/278 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 51  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 110

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++++P    +L  LE+LD+ +N L+++P S  SL SL +L + +N L+ 
Sbjct: 111 NLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKN 170

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+++P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 171 LPAEISGMKRLKHLDCNSNLLESIPSELAGMESLELLYLRRNKLRFLP-EFPSCKLLKEL 229

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            +  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 230 HLGENQIEMLGAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 287

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            S   L  L+ L ++ NP+    R I+  G Q V++Y+
Sbjct: 288 YSLGKL-HLKFLALEGNPMRTIRREIINKGTQEVLKYL 324



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 154/350 (44%), Gaps = 52/350 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL  L E  S K  ++L+L     + IE L  + +  L+S++ LDL +N++ +VP  I  
Sbjct: 213 KLRFLPEFPSCKLLKELHLGE---NQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITL 269

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L SL++LDL  N I  LP S+G L  L +L L GN +                       
Sbjct: 270 LQSLERLDLSNNDISSLPYSLGKL-HLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKI 328

Query: 177 -----------------LP----VALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKK 212
                            LP    V +  ++ L+ LD      + +PD +   +    +  
Sbjct: 329 KDDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTS 388

Query: 213 LIVETNDLEELPHTIGQCSSL-RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +    N L E+P  I +   +  ++ + +N+L  +   +  +  L  L +R N +  LP 
Sbjct: 389 INFSKNQLCEIPKRIIELKEMVSDVNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPE 448

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            M SL  L+ +++SFN  + +PE L   +TL  + I NN       P  +  +E L  LD
Sbjct: 449 EMESLIRLQTINLSFNRFKILPEVLYRISTLETILISNNQVG-SVNPEKLKIMENLVTLD 507

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + NN +  +P        LR L +  NP  VP   I+  G  A+++Y+ D
Sbjct: 508 LQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAILEYLRD 557



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 43  LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 100

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  L  L  L +  N L   P
Sbjct: 101 ILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVP 149


>gi|119569935|gb|EAW49550.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_c [Homo
           sapiens]
          Length = 434

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 161/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 77  NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 136

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S + SL+ L  L +  N  +
Sbjct: 137 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 196

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 197 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 254

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 255 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 312

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 313 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 345



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 100 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 159

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 160 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 219

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 220 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 279

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 280 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 339

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 340 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 397

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 398 MSIENCPLSHLPPQIVAGGPSFIIQFL 424



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 94/317 (29%), Positives = 146/317 (46%), Gaps = 51/317 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LPDS+  L  L  LDL  N++  +P+ +  L SL  L L  NRI  +   I +L 
Sbjct: 8   NSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLS 67

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +R N+I  LP  +  L  L  LD+  N L  LP  IG+   +  L ++ N+L +
Sbjct: 68  KLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLD 127

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGK------------------------------ 252
           LP TIG  SSL  L + YNRL A+P ++ K                              
Sbjct: 128 LPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNS 187

Query: 253 ------------------IHTLEVLSVRYNNIKQLPTTMSSLSS-LRELDVSFNELESVP 293
                               T+  L++ +N I ++P  + S +  L +L++  N+L S+P
Sbjct: 188 LTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLP 247

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
                 T++V++N+  N   L  +P  +  L  LE L +SNN ++ LP     L +LR L
Sbjct: 248 LDFGTWTSMVELNLATN--QLTKIPEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLREL 305

Query: 354 RVQENPLEVPPRNIVEM 370
            ++EN LE  P  I  +
Sbjct: 306 DLEENKLESLPNEIAYL 322



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/298 (28%), Positives = 140/298 (46%), Gaps = 51/298 (17%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           ++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L SL  L LR N+I+ + 
Sbjct: 1   MTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVE 60

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             +  L +L  L +  N +  LP  IG L +L  L V  N LE LP  IG C+ +  L +
Sbjct: 61  KDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDL 120

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL-- 296
            +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL++  N + ++PESL  
Sbjct: 121 QHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLS 180

Query: 297 -------------CF----------------------------------ATTLVKMNIGN 309
                        CF                                  A  L K+N+ +
Sbjct: 181 SLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKD 240

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N   L +LP   G    + EL+++ NQ+  +P+    L  L VL +  N L+  P  +
Sbjct: 241 N--QLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKLPHGL 296


>gi|197100985|ref|NP_001126707.1| leucine-rich repeat protein SHOC-2 [Pongo abelii]
 gi|55732408|emb|CAH92905.1| hypothetical protein [Pongo abelii]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENALTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENA--LTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|332212811|ref|XP_003255512.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Nomascus
           leucogenys]
 gi|441600055|ref|XP_004087585.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Nomascus
           leucogenys]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.4 bits (98), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|24650332|ref|NP_733154.1| scribbled, isoform A [Drosophila melanogaster]
 gi|386766560|ref|NP_001036761.3| scribbled, isoform B [Drosophila melanogaster]
 gi|23172362|gb|AAN14076.1| scribbled, isoform A [Drosophila melanogaster]
 gi|383292965|gb|ABI31210.3| scribbled, isoform B [Drosophila melanogaster]
          Length = 1756

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|28261017|gb|AAO32792.1| scribbled [Drosophila melanogaster]
          Length = 1850

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/274 (32%), Positives = 131/274 (47%), Gaps = 3/274 (1%)

Query: 89  KKGTRDLNLQNKLMDNIEWLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           K   R +   NK   ++  +P+ I + S +L  L L  N I  +P     L  L+KL L 
Sbjct: 9   KGCNRQVEFVNKRHCSLPQVPEEILRYSRTLKELFLDANHIRDLPKNFFRLHRLRKLGLS 68

Query: 148 ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
            N I  LP  I +  +LV LD+  N I  +P  +  L  L+  D  SN +  LP     L
Sbjct: 69  DNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQL 128

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L  L +    L  LP   G  + L  L +  N LK LPE + ++  L+ L +  N I+
Sbjct: 129 KNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNEIE 188

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L  L EL +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L
Sbjct: 189 DLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSL 246

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
            +LD++ N +  LPD    LSRL +L++ +N L+
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQ 280



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 2/231 (0%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LK+L L AN I +LP +   L  L  L L  N+I  LP  +     L ELD+  N++  
Sbjct: 38  TLKELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPD 97

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           +PD I  L SL+     +N + +LP    Q  +L  L ++   L  LP   G +  LE L
Sbjct: 98  IPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL 157

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            +R N +K LP T+S L+ L+ LD+  NE+E +P  L +   L ++ + +N   L+ LP 
Sbjct: 158 ELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHN--QLQRLPP 215

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            +G L  L  LD+S N++  LP+    L  L  L + +N LE  P  I ++
Sbjct: 216 ELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKL 266


>gi|7144483|gb|AAF26357.2| Scribble [Drosophila melanogaster]
          Length = 1756

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|403257782|ref|XP_003921473.1| PREDICTED: leucine-rich repeat-containing protein 40 [Saimiri
           boliviensis boliviensis]
          Length = 615

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 170/295 (57%), Gaps = 10/295 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L++L+KL++  N++  LP+ I +L 
Sbjct: 105 NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELANLQKLNISHNKLKILPEEITNLR 164

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N++  +     +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 165 NLKCLYLQHNELICISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKS 224

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 225 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 283

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L  LE LD+SNN I  LP
Sbjct: 284 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLHSLERLDLSNNDISSLP 341

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE-----KRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   ++     +RD+ T+
Sbjct: 342 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATE 395



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 146/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 288 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLHSLERLDLSNNDISSLPYSLGNL 347

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 348 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQRDSATETAMTLPSESRV 406

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD +   +    +  +    N L E+P  + +   +  +
Sbjct: 407 NIHAIITLKMLDYSDKQATLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRMVELKEMVSD 466

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L ++   +  +  L  L +R N +  LP  M  L  L+ +++SFN  + +PE 
Sbjct: 467 VNLSFNKLSSISLELCMLQKLTFLDLRNNFLNSLPEEMELLVRLQTINLSFNRFKMLPEV 526

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 527 LYRIFTLETILISNNQVG-SMDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 585

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 586 DGNPFRVPRAAILMKGTAAILEYLRDRI 613


>gi|440894992|gb|ELR47302.1| Leucine-rich repeat and IQ domain-containing protein 4, partial
           [Bos grunniens mutus]
          Length = 585

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/298 (31%), Positives = 154/298 (51%), Gaps = 8/298 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S+G+ + L  LD+S NR+ A+P T+G LS + ++ L  N + ++P  +    SL  L
Sbjct: 252 LPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHLEKIPRLLCRWTSLFLL 311

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  L  +  RLV L+ LDL  N L   P  I SL +L+ L ++ N + +LP   
Sbjct: 312 YLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSLKNLEVLALDDNKICQLPSDF 371

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN---NIKQLPTTMSSLSSLRELDV 284
           G  S L+ L +  N+  + P+ +  + +LE L +  +    +  LP  +  L +L+EL +
Sbjct: 372 GSLSKLKILGLTGNQFSSFPKEILSLASLEKLYIGQDEGAKLTHLPECIKRLQNLKELYI 431

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LE +P SL     L  ++   N   ++ LP +I   + L+EL   +N I  LP++ 
Sbjct: 432 ENNHLEYLPVSLGSMPNLEILDCHCNL--IKQLPDAICQAQALKELRFEDNLITYLPENL 489

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
             L  L VL +  NP+E PP ++   G +AV +Y   L E+R+ K    K +  W  M
Sbjct: 490 DSLVNLEVLTLTGNPMEEPPMSVCAKGTEAVWEY---LRERRNMKELATKIQAWWRGM 544



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 142/286 (49%), Gaps = 27/286 (9%)

Query: 112 IGKLSSLVSLDLSENRIVAVP-ATIGGLSSLKKLDLH----------------------- 147
           +G+LS+L  LDLS+N + A     + G+  L++L L+                       
Sbjct: 116 MGRLSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGL 175

Query: 148 -ANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  LP  I +   L  + L+ NQ +A P+ L  L  LE +DL  N L+ +P+ IG+
Sbjct: 176 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGN 235

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L  LKK  V  N L  LP ++G+C+ L  L V YNRL ALP  +G++  +  + +  N++
Sbjct: 236 LTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGNHL 295

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
           +++P  +   +SL  L +    L  +  S      L  +++  NF  L   P  I +L+ 
Sbjct: 296 EKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNF--LEHCPLQICSLKN 353

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
           LE L + +N+I  LP  F  LS+L++L +  N     P+ I+ + +
Sbjct: 354 LEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLAS 399



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/298 (28%), Positives = 133/298 (44%), Gaps = 50/298 (16%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +D S   ++ +P  I  L  L+++ L  N I E+P  I  L  +  L L  N++  L   
Sbjct: 56  IDASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPE 115

Query: 181 LSRLVRLEELDLGSNNL--SSLP--DSIGSLISLK---------------------KLIV 215
           + RL  LE LDL  N L  SSLP    I  L  L+                      L +
Sbjct: 116 MGRLSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGL 175

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N L+ LP  I   + LRE+ + +N+  A P  +  ++ LE++ +  N +  +P  + +
Sbjct: 176 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKNKLTVIPEEIGN 235

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L+ L++  VS+N L  +PESL   T L  +++  N   L ALP ++G L  + E+ +S N
Sbjct: 236 LTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYN--RLHALPHTLGELSQMTEVGLSGN 293

Query: 336 Q-----------------------IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                                   +RVL  SFR L  L+ L + +N LE  P  I  +
Sbjct: 294 HLEKIPRLLCRWTSLFLLYLHNTGLRVLRRSFRRLVNLQFLDLSQNFLEHCPLQICSL 351



 Score = 88.6 bits (218), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 97/174 (55%), Gaps = 3/174 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E  P  I  L +L  L L +N+I  +P+  G LS LK L L  N+    P  I  L SL
Sbjct: 341 LEHCPLQICSLKNLEVLALDDNKICQLPSDFGSLSKLKILGLTGNQFSSFPKEILSLASL 400

Query: 165 VYLDL---RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L +    G +++ LP  + RL  L+EL + +N+L  LP S+GS+ +L+ L    N ++
Sbjct: 401 EKLYIGQDEGAKLTHLPECIKRLQNLKELYIENNHLEYLPVSLGSMPNLEILDCHCNLIK 460

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
           +LP  I Q  +L+ELR + N +  LPE +  +  LEVL++  N +++ P ++ +
Sbjct: 461 QLPDAICQAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNPMEEPPMSVCA 514



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 103/244 (42%), Gaps = 50/244 (20%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           +D  + +L ++P+ I +L  L+++ +E N + E+P  I     +R L ++ N+LK L   
Sbjct: 56  IDASNQSLLTIPEDILALRELEEVHLENNLIAEIPKDIQHLRKIRVLYLNKNKLKNLCPE 115

Query: 250 VGKIHTLEVLSVR----------------------------------------------- 262
           +G++  LE L +                                                
Sbjct: 116 MGRLSNLEGLDLSDNPLEASSLPVLSGIRQLRELRLYRTDLADIPVVICKLLHHLELLGL 175

Query: 263 -YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N++K LP  + + + LRE+ +  N+  + P  LC    L  +++  N   L  +P  I
Sbjct: 176 AGNHLKSLPKEIVNQTKLREIHLKHNQFAAFPLELCDLYNLEIIDLDKN--KLTVIPEEI 233

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           GNL  L++  +S N + VLP+S    +RL VL V  N L   P  + E+     V    +
Sbjct: 234 GNLTKLKKFYVSYNSLAVLPESLGRCTRLSVLDVSYNRLHALPHTLGELSQMTEVGLSGN 293

Query: 382 LVEK 385
            +EK
Sbjct: 294 HLEK 297



 Score = 45.1 bits (105), Expect = 0.065,   Method: Compositional matrix adjust.
 Identities = 34/115 (29%), Positives = 62/115 (53%), Gaps = 8/115 (6%)

Query: 68  VGQD-GEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           +GQD G KL+ +       +   +  ++L ++N   +++E+LP S+G + +L  LD   N
Sbjct: 405 IGQDEGAKLTHLPEC----IKRLQNLKELYIEN---NHLEYLPVSLGSMPNLEILDCHCN 457

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVAL 181
            I  +P  I    +LK+L    N I  LP+++  L++L  L L GN +   P+++
Sbjct: 458 LIKQLPDAICQAQALKELRFEDNLITYLPENLDSLVNLEVLTLTGNPMEEPPMSV 512


>gi|149019125|gb|EDL77766.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_c [Rattus
           norvegicus]
          Length = 443

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 140/254 (55%), Gaps = 3/254 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N I  LP+SIG LL L
Sbjct: 59  LQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHL 118

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L GNQ+S LP  +  L  L  LD+  N L  LP+ I  LISL  L+V  N LE +P
Sbjct: 119 KDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVP 178

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L++D NRL  LPEA+G    L  L +  N +  LPT++  L  L  L+ 
Sbjct: 179 DGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNA 238

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L S+P+ +    +L    I +N   L  +P  +     L  LD++ N++  LP S 
Sbjct: 239 DRNKLVSLPKEIGGCCSLTVFCIRDNR--LTRIPSEVSQAMELHVLDVAGNRLHHLPLSL 296

Query: 345 RMLSRLRVLRVQEN 358
             L +L+ L + +N
Sbjct: 297 TTL-KLKALWLSDN 309



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/284 (33%), Positives = 154/284 (54%), Gaps = 6/284 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  +P+SI    +L   D S N +  +P +   L +L  L ++   +  LP++IG+L 
Sbjct: 11  NDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLY 70

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+LR N ++ LP +L++L RLEELDLG+N + SLP+SIG+L+ LK L ++ N L E
Sbjct: 71  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSE 130

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG   +L  L V  NRL+ LPE +  + +L  L V  N ++ +P  +  L  L  L
Sbjct: 131 LPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSIL 190

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L  +PE++     L ++ +  N   L  LP SIG L+ L  L+   N++  LP 
Sbjct: 191 KLDQNRLTQLPEAIGDCENLTELVLTENR--LLTLPTSIGKLKKLNNLNADRNKLVSLPK 248

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
                  L V  +++N L   P  +    +QA+  ++ D+   R
Sbjct: 249 EIGGCCSLTVFCIRDNRLTRIPSEV----SQAMELHVLDVAGNR 288



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 108/250 (43%), Gaps = 44/250 (17%)

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
           + LV LD+  N I  +P ++S    L+  D   N L+ LP+S   L +L  L V    L+
Sbjct: 1   MQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQ 60

Query: 222 ELPHTIG-----------------------QCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP  IG                       Q   L EL +  N + +LPE++G +  L+ 
Sbjct: 61  SLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKD 120

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD----- 313
           L +  N + +LP  + +L +L  LDVS N LE +PE +    +L  + +  N  +     
Sbjct: 121 LWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDG 180

Query: 314 ----------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQE 357
                           L  LP +IG+ E L EL ++ N++  LP S   L +L  L    
Sbjct: 181 IGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADR 240

Query: 358 NPLEVPPRNI 367
           N L   P+ I
Sbjct: 241 NKLVSLPKEI 250


>gi|40788390|dbj|BAA74885.2| KIAA0862 protein [Homo sapiens]
          Length = 584

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 227 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 286

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 287 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 346

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 347 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 404

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 405 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 462

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 463 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 492



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 250 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 309

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 310 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 369

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 370 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 429

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 430 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 489

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 490 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSI 547

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 548 MSIENCPLSHLPPQIVAGGPSFIIQFL 574



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 135 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 194

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 195 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 254

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 255 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 314

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 315 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 371

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 372 IP--FGIFSRAKVL 383



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 362 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 419

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 420 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 479

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 480 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLEL 539

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 540 ALCSKLSIMSIENCPLSHLP 559



 Score = 42.4 bits (98), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP
Sbjct: 107 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 164

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 165 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 213


>gi|168269502|dbj|BAG09878.1| leucine-rich repeat protein SHOC-2 [synthetic construct]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPLELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPLEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.4 bits (98), Expect = 0.48,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|24650330|ref|NP_524754.2| scribbled, isoform D [Drosophila melanogaster]
 gi|51701662|sp|Q7KRY7.1|LAP4_DROME RecName: Full=Protein lap4; AltName: Full=Protein scribble;
           AltName: Full=Protein smell-impaired
 gi|23172361|gb|AAF56598.2| scribbled, isoform D [Drosophila melanogaster]
          Length = 1851

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|156120535|ref|NP_001095413.1| leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|426253112|ref|XP_004020244.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Ovis
           aries]
 gi|166977671|sp|A6QLV3.1|SHOC2_BOVIN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|151553933|gb|AAI48098.1| SHOC2 protein [Bos taurus]
 gi|296472607|tpg|DAA14722.1| TPA: leucine-rich repeat protein SHOC-2 [Bos taurus]
 gi|440906851|gb|ELR57068.1| Leucine-rich repeat protein SHOC-2 [Bos grunniens mutus]
          Length = 582

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 31/109 (28%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP
Sbjct: 105 LDLSKRSIHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|62472958|ref|NP_001014669.1| scribbled, isoform I [Drosophila melanogaster]
 gi|61679402|gb|AAX52996.1| scribbled, isoform I [Drosophila melanogaster]
          Length = 1711

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416


>gi|302796795|ref|XP_002980159.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
 gi|300152386|gb|EFJ19029.1| hypothetical protein SELMODRAFT_112095 [Selaginella moellendorffii]
          Length = 584

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 110/361 (30%), Positives = 171/361 (47%), Gaps = 25/361 (6%)

Query: 54  FRNKVPIMIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIG 113
            R   P +   + CVGQD +   L+ L  L+   +K               I+ L   +G
Sbjct: 21  LREVPPQVYKLLECVGQDEKWWELVDLHRLVLAHNK---------------IKLLSQELG 65

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
            L S+V L++S N + ++P +IG L+SLK LD+  N I+ELP  IG+L SLV      NQ
Sbjct: 66  NLVSVVVLNISYNELESLPESIGMLTSLKTLDVSHNAILELPVEIGNLASLVKFLASNNQ 125

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP----HTIGQ 229
           I  L   +   V L EL L +N L+ LPD + S   L  L +E N +   P    H++G 
Sbjct: 126 IKELASTIGLCVDLAELKLSNNGLTFLPDQLASCSRLISLSIEGNKITGFPSSLFHSLG- 184

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L EL    N +  LPE +G +  L  L +  N IK +P+++ + S L E     N L
Sbjct: 185 --NLTELNAGKNAITELPEEIGNLTRLLRLDLHQNKIKSIPSSLVNCSMLVEAYFGDNLL 242

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
            S+P  +    +L+  ++  N   L   P S  ++  L  LD+SNN +  LP     +  
Sbjct: 243 SSLPNEIGNLQSLLTFDLHGN--QLSEFPVSACSMR-LSVLDLSNNNLSGLPPELGFMGS 299

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMCFFSRSN 409
           LR L +  NPL     ++V     A+++Y+ D     D     +  ++  V+    + S+
Sbjct: 300 LRKLVLTGNPLRTLRTSLVTGSTPALLKYLRDRSTAEDGNIFGMNIQEQVVQAARVAVSS 359

Query: 410 K 410
           K
Sbjct: 360 K 360



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 75/246 (30%), Positives = 124/246 (50%), Gaps = 36/246 (14%)

Query: 81  ASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSS 140
           A+ + VSSK     L+L +K +D++   P ++ +   LV LDL++N I  +P  +   +S
Sbjct: 352 AARVAVSSKA----LSLSDKNLDHV---PPAVWESCDLVQLDLAKNCIQELPPEMSMCTS 404

Query: 141 LKKLDLHANRIIELPDSI-GDLLSLVYLDLRGNQISAL-PVALSRLVRLEELDLGSNNLS 198
           ++ L L  N+I E P S+   L +L +L+L  N I AL P A S +  L+ LDL      
Sbjct: 405 MEALILADNKIQEWPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQ 464

Query: 199 SLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
            LP                      P  +   + L+ELR+   ++ A+P  + ++ +L +
Sbjct: 465 LLP----------------------PPCLSLMTGLQELRLMRTQMAAIPWDLPRMSSLRI 502

Query: 259 LSVRYNNIKQLP--TTMSSLSSLRELDVSFNELESVPESLCF-ATTLVKMNIGNNFADLR 315
           L +  NNI  LP  + +SS  +L ELD++ N L ++P  L +   TL K+ +  N   LR
Sbjct: 503 LDLSQNNISVLPQASLLSSFITLEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGN--PLR 560

Query: 316 ALPRSI 321
           ++ R I
Sbjct: 561 SIRRGI 566



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 111/244 (45%), Gaps = 27/244 (11%)

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           S K L L    +  +P ++ +   LV LDL  N I  LP  +S    +E L L  N +  
Sbjct: 358 SSKALSLSDKNLDHVPPAVWESCDLVQLDLAKNCIQELPPEMSMCTSMEALILADNKIQE 417

Query: 200 LPDSI-GSLISLKKLIVETNDLEELP-HTIGQCSSLRELRVDYNRLKALPEAVGKIHT-L 256
            P S+  SL +LK L +  N +  LP       S+L+ L +     + LP     + T L
Sbjct: 418 WPGSVFASLPNLKHLNLARNPIVALPPGAFSAVSNLQLLDLSGVVAQLLPPPCLSLMTGL 477

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
           + L +    +  +P  +  +SSLR LD+S N +  +P++   ++ +              
Sbjct: 478 QELRLMRTQMAAIPWDLPRMSSLRILDLSQNNISVLPQASLLSSFIT------------- 524

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLS-RLRVLRVQENPLEVPPRNIVEMGAQAV 375
                     LEELD+++N +  LP     L   LR L+V  NPL    R I+E G +A+
Sbjct: 525 ----------LEELDLTDNNLSTLPPQLGYLEPTLRKLKVDGNPLRSIRRGILERGTKAL 574

Query: 376 VQYM 379
           +QY+
Sbjct: 575 LQYL 578


>gi|41281398|ref|NP_031399.2| leucine-rich repeat protein SHOC-2 isoform 1 [Homo sapiens]
 gi|114632804|ref|XP_521602.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           troglodytes]
 gi|149689670|ref|XP_001496623.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Equus caballus]
 gi|194042023|ref|XP_001927528.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Sus scrofa]
 gi|296221216|ref|XP_002756642.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Callithrix
           jacchus]
 gi|332835019|ref|XP_003312812.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Pan troglodytes]
 gi|395828086|ref|XP_003787217.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Otolemur garnettii]
 gi|397510493|ref|XP_003825630.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Pan
           paniscus]
 gi|397510495|ref|XP_003825631.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 2 [Pan
           paniscus]
 gi|426366199|ref|XP_004050149.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Gorilla gorilla
           gorilla]
 gi|14423936|sp|Q9UQ13.2|SHOC2_HUMAN RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|166977684|sp|Q5RAV5.2|SHOC2_PONAB RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|3252979|gb|AAC39856.1| Ras-binding protein SUR-8 [Homo sapiens]
 gi|3293320|gb|AAC25698.1| leucine-rich repeat protein SHOC-2 [Homo sapiens]
 gi|29792199|gb|AAH50445.1| Soc-2 suppressor of clear homolog (C. elegans) [Homo sapiens]
 gi|119569933|gb|EAW49548.1| soc-2 suppressor of clear homolog (C. elegans), isoform CRA_a [Homo
           sapiens]
 gi|410217418|gb|JAA05928.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410217420|gb|JAA05929.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410267376|gb|JAA21654.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410302564|gb|JAA29882.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|410333721|gb|JAA35807.1| soc-2 suppressor of clear homolog [Pan troglodytes]
 gi|417402990|gb|JAA48322.1| Putative leucine-rich repeat protein shoc-2 [Desmodus rotundus]
 gi|431895441|gb|ELK04957.1| Leucine-rich repeat protein SHOC-2 [Pteropus alecto]
          Length = 582

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.4 bits (98), Expect = 0.50,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|324500914|gb|ADY40414.1| Protein lap1 [Ascaris suum]
          Length = 1136

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 146/269 (54%), Gaps = 11/269 (4%)

Query: 99  NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI 158
           N+L D    LP+ + K S+L  LDL  N +  +P  +  LSSL  L L    + +LP  I
Sbjct: 93  NELSD----LPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDI 148

Query: 159 GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN 218
             L +L  LD+R NQ+  LP A+ +L  L ELDLG N LS LP ++GSL  L+ L V+ N
Sbjct: 149 DQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHN 208

Query: 219 DLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
            L  +P ++  C  LR L V  N L ALP+ +G +  L  LS+  N I  LP ++  L +
Sbjct: 209 VLSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKN 268

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           L  L    N L  +  ++   ++L+++ + NN   L  LP +IG L+ L  L I  NQ+ 
Sbjct: 269 LVTLKADSNALTELVPTIGECSSLLELYLFNN--QLTTLPATIGGLKELSVLSIDENQLE 326

Query: 339 VLPDSFRMLSRLRVL-----RVQENPLEV 362
            +P +    S+L +L     R++E PLEV
Sbjct: 327 EIPSAIGGCSKLSILTLRGNRLRELPLEV 355



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/258 (37%), Positives = 138/258 (53%), Gaps = 3/258 (1%)

Query: 104 NIEWLPDSIGKLSS-LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           N+  LP  + + +S L  L L  N+I  +P  +     L+ L L  N+I+ +P +IG L+
Sbjct: 24  NLHELPAEVERSASCLEELYLDCNQICEIPEGLCRCKKLRSLSLGQNKILRVPPAIGSLI 83

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N++S LP  L +   L+ LDL  N L+ LPD +  L SL  L +    L +
Sbjct: 84  ALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQ 143

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I Q  +LR L V  N+L+ LP A+ ++  L  L +  N +  LP  M SL  L +L
Sbjct: 144 LPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRELDLGRNELSHLPLNMGSLEVLEDL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            V  N L +VP+SL     L  +++  N  DL ALP+ IG+LE L EL I+ N+I  LP+
Sbjct: 204 YVDHNVLSAVPDSLTSCGHLRTLDVSQN--DLTALPKEIGDLEQLCELSIAENRIAALPN 261

Query: 343 SFRMLSRLRVLRVQENPL 360
           S   L  L  L+   N L
Sbjct: 262 SIGRLKNLVTLKADSNAL 279



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/283 (34%), Positives = 144/283 (50%), Gaps = 25/283 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ + +   L SL L +N+I+ VP  IG L +L++L L  N + +LP+ +    +L  L
Sbjct: 52  IPEGLCRCKKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKIL 111

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DLR N ++ LP  ++RL  L  L L   +L+ LP  I  L +L+ L V  N L  LP  I
Sbjct: 112 DLRLNLLTRLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAI 171

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   LREL +  N L  LP  +G +  LE L V +N +  +P +++S   LR LDVS N
Sbjct: 172 CQLKHLRELDLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQN 231

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE------------------- 328
           +L ++P+ +     L +++I  N   + ALP SIG L+ L                    
Sbjct: 232 DLTALPKEIGDLEQLCELSIAENR--IAALPNSIGRLKNLVTLKADSNALTELVPTIGEC 289

Query: 329 ----ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
               EL + NNQ+  LP +   L  L VL + EN LE  P  I
Sbjct: 290 SSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAI 332



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 139/260 (53%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LPD + +LSSL  L L E  +  +P  I  L +L+ LD+  N++  LP +I  L  L  L
Sbjct: 121 LPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLREL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N++S LP+ +  L  LE+L +  N LS++PDS+ S   L+ L V  NDL  LP  I
Sbjct: 181 DLGRNELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALPKEI 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    L EL +  NR+ ALP ++G++  L  L    N + +L  T+   SSL EL +  N
Sbjct: 241 GDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSSLLELYLFNN 300

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P ++     L  ++I  N   L  +P +IG    L  L +  N++R LP     L
Sbjct: 301 QLTTLPATIGGLKELSVLSIDEN--QLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRL 358

Query: 348 SRLRVLRVQENPLEVPPRNI 367
           + LRVL + +N L   P  I
Sbjct: 359 ANLRVLDLCDNILAFLPFTI 378



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 138/246 (56%), Gaps = 15/246 (6%)

Query: 131 VPATIGGLSSL---KKLDLHANRIIELPDSI---GDLLSLVYLDLRGNQISALPVALSRL 184
           VP T  G   +   ++ +LH     ELP  +      L  +YLD   NQI  +P  L R 
Sbjct: 7   VPFTCSGRVDVIEKRQCNLH-----ELPAEVERSASCLEELYLDC--NQICEIPEGLCRC 59

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
            +L  L LG N +  +P +IGSLI+L++L +E N+L +LP  + +CS+L+ L +  N L 
Sbjct: 60  KKLRSLSLGQNKILRVPPAIGSLIALEELHLEDNELSDLPEELVKCSNLKILDLRLNLLT 119

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
            LP+ V ++ +L  L +   ++ QLP  +  L +LR LDV  N+L  +P ++C    L +
Sbjct: 120 RLPDVVTRLSSLTHLYLFETSLTQLPPDIDQLQNLRSLDVRENQLRILPPAICQLKHLRE 179

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++G N  +L  LP ++G+LE+LE+L + +N +  +PDS      LR L V +N L   P
Sbjct: 180 LDLGRN--ELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQNDLTALP 237

Query: 365 RNIVEM 370
           + I ++
Sbjct: 238 KEIGDL 243



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 106/184 (57%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +  +PDS+     L +LD+S+N + A+P  IG L  L +L +  NRI  LP+SIG L +L
Sbjct: 210 LSAVPDSLTSCGHLRTLDVSQNDLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNL 269

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           V L    N ++ L   +     L EL L +N L++LP +IG L  L  L ++ N LEE+P
Sbjct: 270 VTLKADSNALTELVPTIGECSSLLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIP 329

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG CS L  L +  NRL+ LP  VG++  L VL +  N +  LP T++ L +LR L +
Sbjct: 330 SAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNILAFLPFTINVLFNLRALWL 389

Query: 285 SFNE 288
           S ++
Sbjct: 390 SVDQ 393



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 111/204 (54%), Gaps = 3/204 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  R+L+L     + +  LP ++G L  L  L +  N + AVP ++     L+ LD+  N
Sbjct: 175 KHLRELDLGR---NELSHLPLNMGSLEVLEDLYVDHNVLSAVPDSLTSCGHLRTLDVSQN 231

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            +  LP  IGDL  L  L +  N+I+ALP ++ RL  L  L   SN L+ L  +IG   S
Sbjct: 232 DLTALPKEIGDLEQLCELSIAENRIAALPNSIGRLKNLVTLKADSNALTELVPTIGECSS 291

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +L +  N L  LP TIG    L  L +D N+L+ +P A+G    L +L++R N +++L
Sbjct: 292 LLELYLFNNQLTTLPATIGGLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLREL 351

Query: 270 PTTMSSLSSLRELDVSFNELESVP 293
           P  +  L++LR LD+  N L  +P
Sbjct: 352 PLEVGRLANLRVLDLCDNILAFLP 375



 Score = 38.5 bits (88), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 49/87 (56%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           G ++L++ +   + +E +P +IG  S L  L L  NR+  +P  +G L++L+ LDL  N 
Sbjct: 311 GLKELSVLSIDENQLEEIPSAIGGCSKLSILTLRGNRLRELPLEVGRLANLRVLDLCDNI 370

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISAL 177
           +  LP +I  L +L  L L  +Q S L
Sbjct: 371 LAFLPFTINVLFNLRALWLSVDQTSPL 397


>gi|219520192|gb|AAI44076.1| ERBB2IP protein [Homo sapiens]
          Length = 1419

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++ VLP S   L+ LR      N L ++PP
Sbjct: 309 NEVEVLPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E +P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEVLPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ LP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEVLPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|327405650|ref|YP_004346488.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327321158|gb|AEA45650.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 345

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/293 (33%), Positives = 145/293 (49%), Gaps = 6/293 (2%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++  P  I  L++L  L+LS   I  +P  I  L +LK L+L  N +  LP  IG+L +L
Sbjct: 48  LDTFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKNLKILNLAYNYLKTLPKEIGELSNL 107

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  N +  LP  +  L  L  L +  N    +P  I  L +L  L +  N + ELP
Sbjct: 108 EALQLNANNLRELPSEMKYLTALSRLQIIQNEFDEIPPVIFELSNLALLDLSNNKISELP 167

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             +G   SLR+L  +   L  +P+ +G++  L  LS+  N I  LP  + +   +  L +
Sbjct: 168 RELGNLKSLRKLLANQCHLTQIPKEIGELSQLYFLSLENNRITSLPNEIGNCRLIESLFI 227

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LES+P+ +   T L ++++ NN   L  LP SIGNL  L  LDISNN+I VLPD+ 
Sbjct: 228 HDNLLESLPDRIGNLTLLTQLSLKNN--QLTQLPLSIGNLTNLFALDISNNKITVLPDAL 285

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKK 397
             L +L  +    NP+E+ P+    M     +     L +    K Q VK  K
Sbjct: 286 CGLKQLETITAYSNPIELIPKCYANMDRLRTI----SLSDSHLTKKQQVKLGK 334



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 140/248 (56%), Gaps = 2/248 (0%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           K  ++L + N   + ++ LP  IG+LS+L +L L+ N +  +P+ +  L++L +L +  N
Sbjct: 79  KKLKNLKILNLAYNYLKTLPKEIGELSNLEALQLNANNLRELPSEMKYLTALSRLQIIQN 138

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
              E+P  I +L +L  LDL  N+IS LP  L  L  L +L     +L+ +P  IG L  
Sbjct: 139 EFDEIPPVIFELSNLALLDLSNNKISELPRELGNLKSLRKLLANQCHLTQIPKEIGELSQ 198

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L  L +E N +  LP+ IG C  +  L +  N L++LP+ +G +  L  LS++ N + QL
Sbjct: 199 LYFLSLENNRITSLPNEIGNCRLIESLFIHDNLLESLPDRIGNLTLLTQLSLKNNQLTQL 258

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
           P ++ +L++L  LD+S N++  +P++LC    L  +   +N  +L  +P+   N++ L  
Sbjct: 259 PLSIGNLTNLFALDISNNKITVLPDALCGLKQLETITAYSNPIEL--IPKCYANMDRLRT 316

Query: 330 LDISNNQI 337
           + +S++ +
Sbjct: 317 ISLSDSHL 324



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 101/192 (52%), Gaps = 2/192 (1%)

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
           +L  ALS   ++  LDL    L + P  I +L +L+ L +    +  LP  I +  +L+ 
Sbjct: 27  SLEEALSSPQKVFILDLSWKKLDTFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKNLKI 86

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L + YN LK LP+ +G++  LE L +  NN+++LP+ M  L++L  L +  NE + +P  
Sbjct: 87  LNLAYNYLKTLPKEIGELSNLEALQLNANNLRELPSEMKYLTALSRLQIIQNEFDEIPPV 146

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +   + L  +++ NN   +  LPR +GNL+ L +L  +   +  +P     LS+L  L +
Sbjct: 147 IFELSNLALLDLSNN--KISELPRELGNLKSLRKLLANQCHLTQIPKEIGELSQLYFLSL 204

Query: 356 QENPLEVPPRNI 367
           + N +   P  I
Sbjct: 205 ENNRITSLPNEI 216



 Score = 45.4 bits (106), Expect = 0.054,   Method: Compositional matrix adjust.
 Identities = 34/131 (25%), Positives = 59/131 (45%), Gaps = 21/131 (16%)

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD------------- 313
           + L   +SS   +  LD+S+ +L++ P  +C  T L  +N+   F               
Sbjct: 26  RSLEEALSSPQKVFILDLSWKKLDTFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKNLK 85

Query: 314 --------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPR 365
                   L+ LP+ IG L  LE L ++ N +R LP   + L+ L  L++ +N  +  P 
Sbjct: 86  ILNLAYNYLKTLPKEIGELSNLEALQLNANNLRELPSEMKYLTALSRLQIIQNEFDEIPP 145

Query: 366 NIVEMGAQAVV 376
            I E+   A++
Sbjct: 146 VIFELSNLALL 156


>gi|348553825|ref|XP_003462726.1| PREDICTED: protein LAP2-like isoform 6 [Cavia porcellus]
          Length = 1418

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N  +L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSNKLEL--LPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|73998572|ref|XP_535013.2| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Canis
           lupus familiaris]
 gi|301755536|ref|XP_002913604.1| PREDICTED: leucine-rich repeat protein SHOC-2-like [Ailuropoda
           melanoleuca]
 gi|410976089|ref|XP_003994458.1| PREDICTED: leucine-rich repeat protein SHOC-2 isoform 1 [Felis
           catus]
 gi|281347753|gb|EFB23337.1| hypothetical protein PANDA_001424 [Ailuropoda melanoleuca]
          Length = 582

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 163/346 (47%), Gaps = 80/346 (23%)

Query: 85  EVSSKKGTRDLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT--------- 134
           E+ +     +L+LQ N+L+D    LPD+IG LSSL  L L  NR+ A+P +         
Sbjct: 256 EIGNCTQITNLDLQHNELLD----LPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEE 311

Query: 135 ------------------------------------IGG---LSSLKKLDLHANRIIELP 155
                                               +GG    S++  L++  NRI ++P
Sbjct: 312 LNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIP 371

Query: 156 DSIGDLLS-LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
             I      L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  L+SL+ LI
Sbjct: 372 FGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLI 431

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           +  N L++LPH +G    LREL ++ N+L++LP  +                       +
Sbjct: 432 LSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEI-----------------------A 468

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L  L++L ++ N+L ++P  +   T L  + +G N   L  LP  IG LE LEEL +++
Sbjct: 469 YLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLND 526

Query: 335 N-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           N  +  LP    + S+L ++ ++  PL   P  IV  G   ++Q++
Sbjct: 527 NPNLHSLPFELALCSKLSIMSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L L+EN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISALPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|402881488|ref|XP_003904303.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Papio anubis]
          Length = 582

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 159/270 (58%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +LS+   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLSKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GN   L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNFRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 153/327 (46%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G    L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P ++S  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLSKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 107/200 (53%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L    +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNFRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|418735838|ref|ZP_13292243.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748566|gb|EKR01465.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 306

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 87/243 (35%), Positives = 135/243 (55%), Gaps = 4/243 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  L L  N++  +P  IG L +LK L L+AN++  LP  IG L +L YL
Sbjct: 60  LPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKEIGQLKNLEYL 119

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  +  L  L+ L L +N L+ LP  I  L +L+ L +  N    LP  I
Sbjct: 120 DLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEI 179

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L EL +++++LK LP+ +G++  L+ LS+R N +  LP  +  L +L  L    N
Sbjct: 180 GQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNN 239

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L  +P+ +     LV +++ NN   L  LP+ +G L+ L  L +  N I  LP   + +
Sbjct: 240 QLTVLPKEIGLLQNLVTLDLRNN--QLETLPKEVGQLKNLRWLFLDANPI--LPKKLKRI 295

Query: 348 SRL 350
            +L
Sbjct: 296 GKL 298



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 135/252 (53%), Gaps = 4/252 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDL E ++  +P  I  L +L++L L  N++  LP  IG L +L  L L  NQ++ LP  
Sbjct: 50  LDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYANQLTILPKE 109

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  LE LDL +N L++LP  IG L +LK L +  N L  LP  I Q  +L +L +  
Sbjct: 110 IGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLEDLDLSG 169

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N    LP+ +G++  L  L + ++ +K LP  +  L  L+ L +  N+L  +P+ +    
Sbjct: 170 NSFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLK 229

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L+ ++  NN   L  LP+ IG L+ L  LD+ NNQ+  LP     L  LR L +  NP 
Sbjct: 230 NLLTLSSDNN--QLTVLPKEIGLLQNLVTLDLRNNQLETLPKEVGQLKNLRWLFLDANP- 286

Query: 361 EVPPRNIVEMGA 372
            + P+ +  +G 
Sbjct: 287 -ILPKKLKRIGK 297



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 71/214 (33%), Positives = 116/214 (54%), Gaps = 2/214 (0%)

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           L  ++ + L +  LDLR  +++ LP  + +L  L EL L +N L++LP  IG L +LK L
Sbjct: 37  LTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKIL 96

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L  LP  IGQ  +L  L ++ N+L  LP+ +G +  L++L +  N +  LP  +
Sbjct: 97  HLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEI 156

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L +LD+S N    +P+ +     L ++ + +  + L+ LP+ IG L+ L+ L + 
Sbjct: 157 WQLKNLEDLDLSGNSFTILPKEIGQLKNLGELILEH--SQLKTLPKEIGQLKDLQHLSLR 214

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           NNQ+ +LP     L  L  L    N L V P+ I
Sbjct: 215 NNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEI 248


>gi|405968548|gb|EKC33612.1| hypothetical protein CGI_10017764 [Crassostrea gigas]
          Length = 799

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 96/295 (32%), Positives = 159/295 (53%), Gaps = 5/295 (1%)

Query: 75  LSLIKLASLIEVSSKKGTRDLNLQNKLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPA 133
           +S + ++S +  S KKG  ++  +  L DN I  +P +  K  ++  ++L+ N +  +P 
Sbjct: 159 ISYMDVSSNMIRSIKKGLYEMTAEVDLSDNRITEMPTAAVKKPNIQKINLARNGVTLIPE 218

Query: 134 TIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL-VRLEELDL 192
            I  LS L  LDL  N + E+P  IG +  L YL+L  N I  LP  +  L   L+ LD+
Sbjct: 219 NIDKLSRLTWLDLSHNAVQEIPAQIGGVRFLHYLNLSHNHIKTLPEEICNLGYALDHLDI 278

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N +  LPD + SL  L    V  N++E LP +I +   L  L V  N+L ++  AV  
Sbjct: 279 SHNEIPVLPDGMKSLRKLTYFDVSNNEVEYLPESIRELPCLTTLGVSQNKLMSMKFAV-Y 337

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  LE L +  N+I+ +P  +  + SL  LD+S+N+++ +P S+    +L  +N+  N  
Sbjct: 338 LKQLEHLYLSRNSIEVIPEEIDHMKSLVTLDLSWNKIKELPSSIGNVKSLKSLNVCGN-- 395

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L A+P S+G+ ++L  LD+S+N++ VLP   R L  L    V  N + + P++I
Sbjct: 396 KLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRKLRNLETFHVSHNEIALMPKSI 450



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 172/395 (43%), Gaps = 82/395 (20%)

Query: 64  CMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDL 123
           C+  +G    KL  +K A  +     K    L L     ++IE +P+ I  + SLV+LDL
Sbjct: 318 CLTTLGVSQNKLMSMKFAVYL-----KQLEHLYLSR---NSIEVIPEEIDHMKSLVTLDL 369

Query: 124 SENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR 183
           S N+I  +P++IG + SLK L++  N++  +PDS+G    L +LDL  N+++ LP  L +
Sbjct: 370 SWNKIKELPSSIGNVKSLKSLNVCGNKLSAIPDSLGHGQVLTFLDLSHNRLTVLPSDLRK 429

Query: 184 LVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL-------------------- 223
           L  LE   +  N ++ +P SI  L  L+ L V  N L EL                    
Sbjct: 430 LRNLETFHVSHNEIALMPKSIDFLYQLRSLDVSKNGLNELNLPKTLTHLNMSDNPLSINP 489

Query: 224 --------------------------------PHTIGQCSSLRELRVDYNRLKALPEAVG 251
                                           P ++     L+ L +  N LK L + V 
Sbjct: 490 TDIRSTIVVMGDKDHLRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVC 549

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGN-- 309
           K+  L  ++  +N I  LP  +S+L  L +L VS N L S   SL    +L  +N+ N  
Sbjct: 550 KMRGLVSITACHNEITALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNK 609

Query: 310 ------NFADLRAL-------------PR-SIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
                 NF DL  L             P+  I  L  L  L+IS N I  +P  F  L R
Sbjct: 610 ITLLPDNFGDLNKLINMDLSENELLNFPKDQIDVLASLLHLNISKNHIDQMPIEFPYLYR 669

Query: 350 LRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
           L+VLR   N L+  P ++ +M +  V+    +++E
Sbjct: 670 LKVLRAASNDLKSIPSDMDKMKSLEVLDISDNIIE 704



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/249 (30%), Positives = 126/249 (50%), Gaps = 23/249 (9%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
           K     NR+  LP SI  L +L ++D+  N +SA P ++SR+ +LE L + +N +  LP 
Sbjct: 70  KFTAENNRLKRLPKSIAALENLEHIDITNNTLSAFPGSVSRMKKLEVLIIKNNAIKKLPP 129

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCS------------SLR--------ELRVDYNR 242
           +I     L+KL    N +  LP +IG+ S            S++        E+ +  NR
Sbjct: 130 AIHKCTGLQKLYASNNKIRALPKSIGKASISYMDVSSNMIRSIKKGLYEMTAEVDLSDNR 189

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           +  +P A  K   ++ +++  N +  +P  +  LS L  LD+S N ++ +P  +     L
Sbjct: 190 ITEMPTAAVKKPNIQKINLARNGVTLIPENIDKLSRLTWLDLSHNAVQEIPAQIGGVRFL 249

Query: 303 VKMNIGNNFADLRALPRSIGNLEM-LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
             +N+ +N   ++ LP  I NL   L+ LDIS+N+I VLPD  + L +L    V  N +E
Sbjct: 250 HYLNLSHNH--IKTLPEEICNLGYALDHLDISHNEIPVLPDGMKSLRKLTYFDVSNNEVE 307

Query: 362 VPPRNIVEM 370
             P +I E+
Sbjct: 308 YLPESIREL 316



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 112/221 (50%), Gaps = 2/221 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ +P S+  L  L  LDLS N +  +   +  +  L  +    N I  LP+ I  L  L
Sbjct: 518 MDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEITALPEKISALKKL 577

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L +  N +++   +L RLV L +L++ +N ++ LPD+ G L  L  + +  N+L   P
Sbjct: 578 EKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLINMDLSENELLNFP 637

Query: 225 H-TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
              I   +SL  L +  N +  +P     ++ L+VL    N++K +P+ M  + SL  LD
Sbjct: 638 KDQIDVLASLLHLNISKNHIDQMPIEFPYLYRLKVLRAASNDLKSIPSDMDKMKSLEVLD 697

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
           +S N +ES+PE +C    L ++N+  N    R  P++  NL
Sbjct: 698 ISDNIIESLPEKICKMPELKEINVSENKI-TRGWPKAWENL 737



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 117/244 (47%), Gaps = 24/244 (9%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           L +L SL L    +  +P ++  L  LK LDL  N +  L D++  +  LV +    N+I
Sbjct: 505 LRNLTSLALCNLGMDEIPPSVFNLRCLKHLDLSNNALKTLTDNVCKMRGLVSITACHNEI 564

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           +ALP  +S L +LE+L + +N L+S   S+G L+SL  L +  N +  LP   G  + L 
Sbjct: 565 TALPEKISALKKLEKLHVSNNGLTSFSPSLGRLVSLCDLNMSNNKITLLPDNFGDLNKLI 624

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
            + +  N L   P+                        +  L+SL  L++S N ++ +P 
Sbjct: 625 NMDLSENELLNFPK----------------------DQIDVLASLLHLNISKNHIDQMPI 662

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
              +   L  +   +N  DL+++P  +  ++ LE LDIS+N I  LP+    +  L+ + 
Sbjct: 663 EFPYLYRLKVLRAASN--DLKSIPSDMDKMKSLEVLDISDNIIESLPEKICKMPELKEIN 720

Query: 355 VQEN 358
           V EN
Sbjct: 721 VSEN 724


>gi|355719293|gb|AES06552.1| soc-2 suppressor of clear-like protein [Mustela putorius furo]
          Length = 582

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 156/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 163 SLVYLDLRGNQISALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLIS------------ 209
           +L  L+L  N ISALP +L S LV+L  L L  N     P    S  S            
Sbjct: 308 ALEELNLENNNISALPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 210 -------------LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
                        L KL ++ N L  LP   G  +S+ EL +  N+L  +PE V  + +L
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFA----------------- 299
           EVL +  N +K+LP  + +L  LRELD+  N+LES+P  + +                  
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 300 ------TTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
                 T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L L+EN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALNENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISALPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALNEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|348553823|ref|XP_003462725.1| PREDICTED: protein LAP2-like isoform 5 [Cavia porcellus]
          Length = 1407

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N  +L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSNKLEL--LPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|442621262|ref|NP_001262989.1| scribbled, isoform U [Drosophila melanogaster]
 gi|440217926|gb|AGB96369.1| scribbled, isoform U [Drosophila melanogaster]
          Length = 1766

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/306 (33%), Positives = 161/306 (52%), Gaps = 12/306 (3%)

Query: 75  LSLIKLASLIEVSSKKGTRDLN--LQN----KLMD----NIEWLPDSIGKLSSLVSLDLS 124
           L LI L+  I+       RDL   LQN    +++D     ++ LP  IGKL +L  L L 
Sbjct: 18  LFLIHLSYEIQAEEPGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLH 77

Query: 125 ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRL 184
            N++  +P  I  L +L+ L L +NR+  LP  I  L +L  LDL  NQ++ LP  + +L
Sbjct: 78  YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQL 137

Query: 185 VRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLK 244
             L+ L L SN L++L   I  L +LK L +  N L  LP+ I Q  +L+ L +  N+  
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 245 ALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVK 304
             P+ +G++  L+VL +  N I  LP  ++ L  L+ L +S N+L ++P+ +     L  
Sbjct: 198 TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQT 257

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           +++ NN   L+ LP+ I  L+ L+ L +SNNQ+ +LP     L  L  L +  N L   P
Sbjct: 258 LDLRNN--QLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLP 315

Query: 365 RNIVEM 370
             I ++
Sbjct: 316 NEIEQL 321



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 143/275 (52%), Gaps = 5/275 (1%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           IE+   K  + L L     + +  LP  I +L +L  L L  NR+  +P  I  L +L+ 
Sbjct: 63  IEIGKLKNLQRLYLH---YNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQV 119

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL +N++  LP  I  L +L  L L  N+++ L   + +L  L+ LDL +N L++LP+ 
Sbjct: 120 LDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNE 179

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           I  L +LK L +  N     P  IGQ  +L+ L ++ N++  LP  + K+  L+ L +  
Sbjct: 180 IEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSD 239

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP  +  L +L+ LD+  N+L+++P+ +     L  + + NN   L  LP+ IG 
Sbjct: 240 NQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN--QLTILPQEIGK 297

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           L+ L  L +  NQ+  LP+    L  L+ L +  N
Sbjct: 298 LKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 332



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 125/230 (54%), Gaps = 2/230 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  I +L +L  LDL  N++  +P  I  L +L+ L LH+NR+  L   I  L +L  L
Sbjct: 107 LPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSL 166

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  NQ++ LP  + +L  L+ L L  N  ++ P  IG L +LK L +  N +  LP+ I
Sbjct: 167 DLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEI 226

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            +   L+ L +  N+L  LP+ + ++  L+ L +R N +K LP  +  L +L+ L +S N
Sbjct: 227 AKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNN 286

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           +L  +P+ +     L+ +++   +  L  LP  I  L+ L+ L ++NNQ 
Sbjct: 287 QLTILPQEIGKLKNLLWLSLV--YNQLTTLPNEIEQLKNLQTLYLNNNQF 334



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 102/184 (55%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L   I +L +L SLDLS N++  +P  I  L +LK L L  N+    P  IG L +L  L
Sbjct: 153 LSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVL 212

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQI+ LP  +++L +L+ L L  N L +LP  I  L +L+ L +  N L+ LP  I
Sbjct: 213 FLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEI 272

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+ L +  N+L  LP+ +GK+  L  LS+ YN +  LP  +  L +L+ L ++ N
Sbjct: 273 EQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 332

Query: 288 ELES 291
           +  S
Sbjct: 333 QFSS 336


>gi|348553819|ref|XP_003462723.1| PREDICTED: protein LAP2-like isoform 3 [Cavia porcellus]
          Length = 1301

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 152/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSN--KLELLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|158259127|dbj|BAF85522.1| unnamed protein product [Homo sapiens]
          Length = 582

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQELVLTNNQLTTLPRGI 490



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L+EL ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L++L+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQELV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.51,   Method: Compositional matrix adjust.
 Identities = 30/102 (29%), Positives = 55/102 (53%), Gaps = 2/102 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  LD+ +N++R +P     L  L  L ++ N +    ++I
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDI 211


>gi|54607114|ref|NP_001005868.1| protein LAP2 isoform 1 [Mus musculus]
 gi|187954753|gb|AAI41189.1| Erbb2 interacting protein [Mus musculus]
          Length = 1450

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S LRE  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLTNMRTFAADHNYLQQLPP 339



 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 150/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 REFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + +  N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNITVLFLHCN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 155/295 (52%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L +  N++  LP+  
Sbjct: 307 SFNEIEALPSSIGQLTNMRTFAADHNY--LQQLPPEIGNWKNITVLFLHCNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D +TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDTETQ 418



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS L++  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLREFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSIGQLTNMRTFAADHNYLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHCNKLETLPEEMGDMQKLKVINLSDN--RLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 86/253 (33%), Positives = 141/253 (55%), Gaps = 5/253 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP ++G+L  L  L  ++N +  +P ++G L  L+ L++  N + +LP S+  L +L  L
Sbjct: 403 LPATLGQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERL 462

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
               NQ++  PV L+++     L L  N L+++PD++G L  L+ L +  N L  LP TI
Sbjct: 463 AAFTNQLTRFPVELAQV---RHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETI 519

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  SL  L +  N+L ALP+ +G++  L  L +  N +++LP ++ SL+SL  + +  N
Sbjct: 520 GQLDSLEMLTLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNN 579

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            LE +P S+     L   ++      LR LP  IGN + LE+L I ++Q+ +LPD+    
Sbjct: 580 PLEILPASVGGWQRLRTASL--QLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDC 637

Query: 348 SRLRVLRVQENPL 360
             L VL +  N L
Sbjct: 638 RSLTVLTLSGNKL 650



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/303 (31%), Positives = 150/303 (49%), Gaps = 49/303 (16%)

Query: 112 IGKLSSLVSLDLS----ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +  L +L SL LS    E + V + +T+ G+++L+ L L   R+  LP S+     LV L
Sbjct: 288 LAALPALQSLHLSRYGKEEKAVDLDSTLAGVTTLRHLTLDGIRLAALPRSLLANPQLVTL 347

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L   +++ALP +L  L RLEEL L  N L +LP  +G L  L++L ++  +L ELP T+
Sbjct: 348 SLVDCELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTELPATL 407

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSS--------- 278
           GQ   L  L    N L  LPE++G++  L  L+V  N++  LP ++  L +         
Sbjct: 408 GQLGQLTYLTATQNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLAAFTN 467

Query: 279 ----------------------------------LRELDVSFNELESVPESLCFATTLVK 304
                                             LR L ++ N L S+PE++    +L  
Sbjct: 468 QLTRFPVELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEM 527

Query: 305 MNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
           + +G+N   L ALP+ IG L  L  L++ NN++R LP+S   L+ L  + +  NPLE+ P
Sbjct: 528 LTLGDN--QLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILP 585

Query: 365 RNI 367
            ++
Sbjct: 586 ASV 588



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 131/251 (52%), Gaps = 11/251 (4%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L+ +  L LS+N++  VP  +G L  L+ L L  N +  LP++IG L SL  L L  NQ
Sbjct: 475 ELAQVRHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGDNQ 534

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ALP  + +L RL  L+LG+N L  LP+SIGSL SL  +++  N LE LP ++G    L
Sbjct: 535 LTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRL 594

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
           R   +    L+ LP+ +G    LE L++  + +  LP  ++   SL  L +S N+L  +P
Sbjct: 595 RTASLQLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLP 654

Query: 294 ESLCFATTLVKM--------NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
           E +   T L ++          G+    L  LP  + N   L +L +   Q     D+ R
Sbjct: 655 ERMGKLTRLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQQAFDGGDALR 714

Query: 346 M---LSRLRVL 353
           +   L RL+ L
Sbjct: 715 LSAALPRLQTL 725



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 92/196 (46%), Gaps = 23/196 (11%)

Query: 191 DLGSNNLSSLPD---SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN------ 241
           +L  N   + PD    +G L +L+KL   +  L ++         L  L +DY       
Sbjct: 224 ELTVNGFDTRPDWLIGLGRLTNLRKLTFSSGQLADMNALFTSLQRLETLDLDYVGPADRL 283

Query: 242 ---RLKALPEAVGKIHTLEVLSVRYNNIKQ---LPTTMSSLSSLRELDVSFNELESVPES 295
              RL ALP A+  +H       RY   ++   L +T++ +++LR L +    L ++P S
Sbjct: 284 PRLRLAALP-ALQSLHL-----SRYGKEEKAVDLDSTLAGVTTLRHLTLDGIRLAALPRS 337

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L     LV +++ +   +L ALP S+ NL  LEEL +  N ++ LP     L+RLR L +
Sbjct: 338 LLANPQLVTLSLVD--CELTALPESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSL 395

Query: 356 QENPLEVPPRNIVEMG 371
               L   P  + ++G
Sbjct: 396 DRCELTELPATLGQLG 411



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 85/218 (38%), Gaps = 59/218 (27%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+SIG L+SL ++ +  N +  +PA++GG   L+   L    +  LPD IG+   L  L
Sbjct: 561 LPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASLQLPYLRRLPDQIGNWQQLEDL 620

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND-------- 219
            +  +Q+  LP AL+    L  L L  N L  LP+ +G L  L++L+V            
Sbjct: 621 TIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLTRLRQLVVSARSDSTTGSGL 680

Query: 220 --LEELPHTIGQCSSLRELRVDY------------------------------------- 240
             L  LP  +  C +L +L V                                       
Sbjct: 681 GRLTNLPADLVNCPALTDLTVQQQQAFDGGDALRLSAALPRLQTLSFINCGITDLSGIVW 740

Query: 241 ------------NRLKALPEAVGKIHTLEVLSVRYNNI 266
                       NRL  LP ++  +  L  +++  NN+
Sbjct: 741 SKLSLVNLNLMQNRLSQLPNSLLDMPNLTQINLADNNL 778



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 19/157 (12%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHA----------NRII 152
           D +  LPD++    SL  L LS N+++ +P  +G L+ L++L + A           R+ 
Sbjct: 625 DQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLGRLT 684

Query: 153 ELPDSIGDLLSLVYLDLR------GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
            LP  + +  +L  L ++      G     L  AL RL  L  ++ G  +LS +   + S
Sbjct: 685 NLPADLVNCPALTDLTVQQQQAFDGGDALRLSAALPRLQTLSFINCGITDLSGI---VWS 741

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRL 243
            +SL  L +  N L +LP+++    +L ++ +  N L
Sbjct: 742 KLSLVNLNLMQNRLSQLPNSLLDMPNLTQINLADNNL 778


>gi|427783827|gb|JAA57365.1| Putative leucine-rich repeat protein shoc-2 [Rhipicephalus
           pulchellus]
          Length = 626

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/268 (31%), Positives = 148/268 (55%), Gaps = 5/268 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IGKL+ LV+ D S N +  +PA IG    L  LD+  N +++LPD+IG+L+
Sbjct: 270 NKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVDLPDTIGNLM 329

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
            L    +R NQ++A+P +LS  V + + ++ SN +S LP+ +  S  +L  L +  N+  
Sbjct: 330 VLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHTLTLSRNNFA 389

Query: 222 ELPHTI-GQCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
             P     Q +++  + +++N++  +P  +  +   L  L+++ N +  LP  + + +++
Sbjct: 390 SYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTM 449

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            EL++  N+L  +P+ + +   L  + + NN   LR LP +IG+L  L  LD+  N++  
Sbjct: 450 VELNLGTNQLNKIPDDIQYLVCLEVLILSNNL--LRRLPATIGSLGALRVLDLEENRLDG 507

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP+    L  L+ L VQ N L   PR I
Sbjct: 508 LPNEIGHLKNLQRLVVQSNQLTNLPRAI 535



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 149/310 (48%), Gaps = 32/310 (10%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LPD++  L  L  LD+  N++  +P  +  L+SL  L L  NRI E+ ++I +L 
Sbjct: 201 NSLTTLPDTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANLT 260

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I  LP  + +L +L   D  +N+L  LP  IG+ + L  L V+ N+L +
Sbjct: 261 NLTMLSLRENKIRELPAGIGKLTQLVTFDASNNHLKHLPAEIGNCVQLSTLDVQHNELVD 320

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-SSLSSLRE 281
           LP TIG    L    + YN+L A+P+++     +   +V  N + QLP  + +S ++L  
Sbjct: 321 LPDTIGNLMVLSRFGIRYNQLTAVPKSLSNCVLITDFNVESNLVSQLPEGLLASFTNLHT 380

Query: 282 LDVSFNELESVPES-------------------------LCFATTLVKMNIGNNFADLRA 316
           L +S N   S P                              A  L K+N+  N   L +
Sbjct: 381 LTLSRNNFASYPSGGPAQFTTVTSINMEHNQINKIPFGIFSRAKHLSKLNMKEN--QLTS 438

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           LP  +G    + EL++  NQ+  +PD  + L  L VL +  N L   P  I  +GA  V+
Sbjct: 439 LPLDLGTWTTMVELNLGTNQLNKIPDDIQYLVCLEVLILSNNLLRRLPATIGSLGALRVL 498

Query: 377 QYMADLVEKR 386
               DL E R
Sbjct: 499 ----DLEENR 504



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/292 (30%), Positives = 146/292 (50%), Gaps = 36/292 (12%)

Query: 94  DLNLQNKLMDNIEWLPDSI-GKLSSLVSLDLSENRIVAVPATIGG---LSSLKKLDLHAN 149
           D N+++ L   +  LP+ +    ++L +L LS N   + P+  GG    +++  +++  N
Sbjct: 356 DFNVESNL---VSQLPEGLLASFTNLHTLTLSRNNFASYPS--GGPAQFTTVTSINMEHN 410

Query: 150 RIIELPDSI-GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           +I ++P  I      L  L+++ NQ+++LP+ L     + EL+LG+N L+ +PD I  L+
Sbjct: 411 QINKIPFGIFSRAKHLSKLNMKENQLTSLPLDLGTWTTMVELNLGTNQLNKIPDDIQYLV 470

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L+ LI+  N L  LP TIG   +LR L ++ NRL  LP  +G +  L+ L V+ N +  
Sbjct: 471 CLEVLILSNNLLRRLPATIGSLGALRVLDLEENRLDGLPNEIGHLKNLQRLVVQSNQLTN 530

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           LP  +  L +L  L V  N L  +PE                          IG LE LE
Sbjct: 531 LPRAIGYLVNLTYLSVGENNLNQIPEE-------------------------IGTLENLE 565

Query: 329 ELDISNN-QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L I++N  +  LP    + + L+++ ++  PL   P  IV  G   V+QY+
Sbjct: 566 SLYINDNPNLHSLPFELALCTNLQIMSIENCPLSQIPAEIVNGGPSLVIQYL 617



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 3/83 (3%)

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+S + +  +P S+   + L +  +  N   L  LP  +G+L  LE L +S N +  LP
Sbjct: 150 LDLSKSSITVLPSSVRELSHLEEFYLYGN--KLATLPDELGSLVHLETLALSENSLTTLP 207

Query: 342 DSFRMLSRLRVLRVQENPL-EVP 363
           D+   L +LRVL V+ N L E+P
Sbjct: 208 DTLANLKQLRVLDVRHNKLNEIP 230



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 30/112 (26%), Positives = 57/112 (50%), Gaps = 2/112 (1%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +  ++I  LP+++  LS L E  +  N+L ++P+ L     L  + +  N   L  LP
Sbjct: 150 LDLSKSSITVLPSSVRELSHLEEFYLYGNKLATLPDELGSLVHLETLALSEN--SLTTLP 207

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            ++ NL+ L  LD+ +N++  +P+    L+ L  L ++ N +     NI  +
Sbjct: 208 DTLANLKQLRVLDVRHNKLNEIPEVVYKLTSLTTLFLRFNRIREVSENIANL 259


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLSNLNVDRNALEYLPLEI 332



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLSNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416


>gi|359323789|ref|XP_003640188.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4 [Canis lupus familiaris]
          Length = 561

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/300 (31%), Positives = 157/300 (52%), Gaps = 8/300 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP+++G  + L  LDLS NR+ ++P  +  L++L ++ L  N +  LP  +    
Sbjct: 222 NGLAGLPEALGLCAGLAVLDLSRNRLRSLPRGLAQLAALTEVGLSGNHLERLPRLVCRWS 281

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           S+  L LR   + AL  +  RLV L  LDL  N+L   P  + +L  L+ L ++ N + +
Sbjct: 282 SVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQNHLERGPAELCALRHLQVLALDDNRIRQ 341

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN---IKQLPTTMSSLSSL 279
           LP      S L+ L +  N+  + PE +  + +LE L +  +    +  +P  +S L SL
Sbjct: 342 LPSDFSSLSKLKMLGLTGNQFPSFPEEILSLESLEKLYIGQDQGMKLTYIPEHISKLQSL 401

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           +EL V  N LE +P SL     L  ++  +N+  L+ LP SI   + L+EL + +N I  
Sbjct: 402 KELYVENNHLEYLPTSLGSMPNLEILDCRHNW--LKKLPNSICQAQALKELLLEDNLITC 459

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSW 399
           LP++   L  L+VL + +NP+E PP+ +   G+QA+  Y+     KR+ K    K +  W
Sbjct: 460 LPENLDNLVNLKVLTLMDNPMEDPPKEVCIEGSQAIWTYLKI---KRNKKIMATKIQAWW 516



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 86/301 (28%), Positives = 140/301 (46%), Gaps = 49/301 (16%)

Query: 126 NRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLV 185
           N + ++P  I   + L+++ L  N+    P  +  L +L  +DL  NQ++A+P  +  L 
Sbjct: 153 NHLRSLPKEIVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDENQLTAIPEEIGNLA 212

Query: 186 RLEE-----------------------LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           RL++                       LDL  N L SLP  +  L +L ++ +  N LE 
Sbjct: 213 RLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRGLAQLAALTEVGLSGNHLER 272

Query: 223 LPHTIGQCSS----------LRELRVDYNRLKAL-------------PEAVGKIHTLEVL 259
           LP  + + SS          LR LR  + RL  L             P  +  +  L+VL
Sbjct: 273 LPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQNHLERGPAELCALRHLQVL 332

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA-DLRALP 318
           ++  N I+QLP+  SSLS L+ L ++ N+  S PE +    +L K+ IG +    L  +P
Sbjct: 333 ALDDNRIRQLPSDFSSLSKLKMLGLTGNQFPSFPEEILSLESLEKLYIGQDQGMKLTYIP 392

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
             I  L+ L+EL + NN +  LP S   +  L +L  + N L+  P +I +  AQA+ + 
Sbjct: 393 EHISKLQSLKELYVENNHLEYLPTSLGSMPNLEILDCRHNWLKKLPNSICQ--AQALKEL 450

Query: 379 M 379
           +
Sbjct: 451 L 451



 Score = 95.9 bits (237), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 140/290 (48%), Gaps = 27/290 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII--ELP----- 155
           + IE +P  I  L +L  L L++NR+  +   +G L SL+ LDL  N ++   LP     
Sbjct: 59  NQIEEIPQDIQHLKNLRILYLNKNRLGKLCPELGRLGSLEGLDLSHNPLLSSSLPVLGGL 118

Query: 156 ----------DSIGDLLSLVYLDLR--------GNQISALPVALSRLVRLEELDLGSNNL 197
                       +G++ +++   L         GN + +LP  +    +L E+ LG N  
Sbjct: 119 RRLRELRLYHTHLGEIPNVLCKLLHHLELLGLTGNHLRSLPKEIVNQTQLREIYLGHNQF 178

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
           +  P  +  L +L+ + ++ N L  +P  IG  + L++  V  N L  LPEA+G    L 
Sbjct: 179 AVFPPELCVLCNLEIIDLDENQLTAIPEEIGNLARLQKFYVADNGLAGLPEALGLCAGLA 238

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL +  N ++ LP  ++ L++L E+ +S N LE +P  +C  +++  + + +    LRAL
Sbjct: 239 VLDLSRNRLRSLPRGLAQLAALTEVGLSGNHLERLPRLVCRWSSVHLLYLRD--TGLRAL 296

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            RS   L  L  LD+S N +   P     L  L+VL + +N +   P + 
Sbjct: 297 RRSFRRLVHLRLLDLSQNHLERGPAELCALRHLQVLALDDNRIRQLPSDF 346



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 85/308 (27%), Positives = 131/308 (42%), Gaps = 53/308 (17%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +D S   +  VP  I  L  L+++    N+I E+P  I  L +L  L L  N++  L   
Sbjct: 31  IDASSQSLTTVPREITDLEELEEVHXEKNQIEEIPQDIQHLKNLRILYLNKNRLGKLCPE 90

Query: 181 LSRLVRLEELDLGSNNL--SSLPDSIGSLISLKKLIVET--------------------- 217
           L RL  LE LDL  N L  SSLP   G     +  +  T                     
Sbjct: 91  LGRLGSLEGLDLSHNPLLSSSLPVLGGLRRLRELRLYHTHLGEIPNVLCKLLHHLELLGL 150

Query: 218 --NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N L  LP  I   + LRE+ + +N+    P  +  +  LE++ +  N +  +P  + +
Sbjct: 151 TGNHLRSLPKEIVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDENQLTAIPEEIGN 210

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L+ L++  V+ N L  +PE+L     L  +++  N   LR+LPR +  L  L E+ +S N
Sbjct: 211 LARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRN--RLRSLPRGLAQLAALTEVGLSGN 268

Query: 336 QIRVLP-----------------------DSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            +  LP                        SFR L  LR+L + +N LE  P    E+ A
Sbjct: 269 HLERLPRLVCRWSSVHLLYLRDTGLRALRRSFRRLVHLRLLDLSQNHLERGP---AELCA 325

Query: 373 QAVVQYMA 380
              +Q +A
Sbjct: 326 LRHLQVLA 333



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 106/244 (43%), Gaps = 50/244 (20%)

Query: 190 LDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEA 249
           +D  S +L+++P  I  L  L+++  E N +EE+P  I    +LR L ++ NRL  L   
Sbjct: 31  IDASSQSLTTVPREITDLEELEEVHXEKNQIEEIPQDIQHLKNLRILYLNKNRLGKLCPE 90

Query: 250 VGKIHTLEVLSVRY---------------------------------------------- 263
           +G++ +LE L + +                                              
Sbjct: 91  LGRLGSLEGLDLSHNPLLSSSLPVLGGLRRLRELRLYHTHLGEIPNVLCKLLHHLELLGL 150

Query: 264 --NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
             N+++ LP  + + + LRE+ +  N+    P  LC    L  +++  N   L A+P  I
Sbjct: 151 TGNHLRSLPKEIVNQTQLREIYLGHNQFAVFPPELCVLCNLEIIDLDEN--QLTAIPEEI 208

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           GNL  L++  +++N +  LP++  + + L VL +  N L   PR + ++ A   V    +
Sbjct: 209 GNLARLQKFYVADNGLAGLPEALGLCAGLAVLDLSRNRLRSLPRGLAQLAALTEVGLSGN 268

Query: 382 LVEK 385
            +E+
Sbjct: 269 HLER 272


>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
          Length = 602

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 166/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LDL +N L+++P S   L SL +L + +N L+ 
Sbjct: 152 NLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLMRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 212 LPAELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLGAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q
Sbjct: 329 CSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQ 376



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 87/329 (26%), Positives = 148/329 (44%), Gaps = 51/329 (15%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L
Sbjct: 275 NQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL 334

Query: 162 LSLVYLDLRGNQISA--------------------------------------LP----V 179
             L +L L GN +                                        LP    V
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVIETAMTLPSESRV 393

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
            +  ++ L+ LD      + +PD +   +    +  +    N L E+P  I +   +  +
Sbjct: 394 NVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL+ L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCTLQKLTFLDLRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
           L    TL  + I NN   + +L P+ +  +E L  LD+ NN +  +P        LR L 
Sbjct: 514 LYRIPTLETILISNN--QVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLL 571

Query: 355 VQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           +  NP  VP   I+  G  A+++Y+ D +
Sbjct: 572 LDGNPFRVPRAAILMKGTAAILEYLRDRI 600



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 22/252 (8%)

Query: 90  KGTRDL--NLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLH 147
           KGT+++   L++K+ D+     DS+  + + ++L  SE+R+      +  + +LK LD  
Sbjct: 356 KGTQEVLKYLRSKIKDDGPSQNDSV--IETAMTLP-SESRV-----NVHTIITLKMLDYS 407

Query: 148 ANRIIELPDSIGDLLS---LVYLDLRGNQISALPVALSRLVRLEEL----DLGSNNLSSL 200
             +   +PD + D +    +  ++   NQ+  +P    R+V L+E+    +L  N LS +
Sbjct: 408 DKQTALIPDEVFDAVKSNIITSINFSKNQLCEIP---KRIVELKEMVSDVNLSFNKLSFI 464

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
              + +L  L  L +  N L  LP  +   + L+ + + +NR K LPE + +I TLE + 
Sbjct: 465 SLELCTLQKLTFLDLRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEVLYRIPTLETIL 524

Query: 261 VRYNNIKQL-PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNI-GNNFADLRALP 318
           +  N +  L P  M ++ +L  LD+  N+L  +P  L     L  + + GN F   RA  
Sbjct: 525 ISNNQVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAI 584

Query: 319 RSIGNLEMLEEL 330
              G   +LE L
Sbjct: 585 LMKGTAAILEYL 596



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 84  LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 141

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  LS L  L +  N L   P
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190


>gi|260788632|ref|XP_002589353.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
 gi|229274530|gb|EEN45364.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
          Length = 343

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 146/287 (50%), Gaps = 4/287 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+   P  + KL  L  L +++N++  VP+ +  L +L+ L++  N++   P  +  L 
Sbjct: 59  NNLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQ 118

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L +  NQ++ +P  +  L  LE L++ +NNLS+ P  +  L  L KL +  N L E
Sbjct: 119 KLRDLGIHDNQLTEVPPGVCSLPNLEALNVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTE 178

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P  +    +L  LRVD N+L   P  V K+  L  L +  N + ++P+ + SL +   L
Sbjct: 179 VPSGVCSLPNLELLRVDNNKLSTFPPGVEKLQKLRELHINSNQLTEVPSGVLSLPNHEVL 238

Query: 283 DVSFNELESVPESLCFATTLVKM-NIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           +V+ N +  +P  +   T L ++  +G N       PR +  L+ LE+L     +  ++P
Sbjct: 239 NVAKNPIRRLPSDV---TRLARVKTLGINDCQFDEFPRQVLQLKTLEKLYAGGCKFDIVP 295

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDA 388
           D    L  L  L V  NPL  PP+++ + G  A++ ++    EK +A
Sbjct: 296 DEVGNLQHLWDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKGEA 342



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 132/257 (51%), Gaps = 2/257 (0%)

Query: 115 LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQI 174
           ++ L  L++S+N++ ++P  IG L  L +L ++ N++ E+P  +  L +L  LD+  N +
Sbjct: 2   ITDLEFLNVSKNKLTSIPEAIGRLQKLSRLYIYGNQLTEVPPGVCSLPNLEVLDVSNNNL 61

Query: 175 SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLR 234
           S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N L   P  + +   LR
Sbjct: 62  STFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQKLR 121

Query: 235 ELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPE 294
           +L +  N+L  +P  V  +  LE L+V  NN+   P  +  L  L +L +  N+L  VP 
Sbjct: 122 DLGIHDNQLTEVPPGVCSLPNLEALNVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTEVPS 181

Query: 295 SLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLR 354
            +C    L  + + NN   L   P  +  L+ L EL I++NQ+  +P     L    VL 
Sbjct: 182 GVCSLPNLELLRVDNN--KLSTFPPGVEKLQKLRELHINSNQLTEVPSGVLSLPNHEVLN 239

Query: 355 VQENPLEVPPRNIVEMG 371
           V +NP+   P ++  + 
Sbjct: 240 VAKNPIRRLPSDVTRLA 256



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 67/211 (31%), Positives = 111/211 (52%), Gaps = 2/211 (0%)

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           D+  L +L++  N+++++P A+ RL +L  L +  N L+ +P  + SL +L+ L V  N+
Sbjct: 1   DITDLEFLNVSKNKLTSIPEAIGRLQKLSRLYIYGNQLTEVPPGVCSLPNLEVLDVSNNN 60

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L   P  + +   LREL ++ N+L  +P  V  +  LEVL+VR N +   P  +  L  L
Sbjct: 61  LSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQKL 120

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R+L +  N+L  VP  +C    L  +N+ NN  +L   P  +  L+ L +L I  NQ+  
Sbjct: 121 RDLGIHDNQLTEVPPGVCSLPNLEALNVSNN--NLSTFPPGVEKLQKLTKLGIYGNQLTE 178

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +P     L  L +LRV  N L   P  + ++
Sbjct: 179 VPSGVCSLPNLELLRVDNNKLSTFPPGVEKL 209


>gi|440894335|gb|ELR46812.1| hypothetical protein M91_11597 [Bos grunniens mutus]
          Length = 863

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ I  L+++ SL+ S N I   P  I    ++ K++L  N+I+  P  +  L SL YL
Sbjct: 436 IPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYL 495

Query: 168 DLRGNQISALPVALS-----------------------RLVRLEELDLGSNNLSSLPDSI 204
            L GN IS +PV +S                        L+ LE LDLG N +  +P SI
Sbjct: 496 SLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSI 555

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +++SL  LI+  N LE  P  +    +LR L +  N+++ +P  +  +  ++ L++  N
Sbjct: 556 SNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN 615

Query: 265 NIKQLPTTMSSLSSLRELDVS---FNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
                P  +  L SL EL++S     +L  +PE L   T L  ++I NN   +R +P +I
Sbjct: 616 QFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNN--AIREMPTNI 673

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
           G L  L  L+  NNQIR LP SF  L+ L+ L +  N L V P  I  + +   + +
Sbjct: 674 GELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINF 730



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 30/300 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++I   + L  L LS+N++  +P  I  L +L+KL ++ N ++++P+ I  L ++  L
Sbjct: 390 MPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSL 449

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  GN I+  P+ +     + +++L  N +   P  + +L SL  L +  N + E+P  I
Sbjct: 450 EFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYISEIPVDI 509

Query: 228 G---------------------QCS--SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                                  CS  +L  L +  N+++ +P ++  + +L VL + YN
Sbjct: 510 SFSKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYN 569

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++  PT + +L +LR LD+S N+++++P  +C    + K+NI NN       P  + +L
Sbjct: 570 KLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN--QFIYFPVELCHL 627

Query: 325 EMLEELDISN---NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + LEEL+IS     ++  LP+    +++L+ L +  N +   P NI E+  +++V   AD
Sbjct: 628 QSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGEL--RSLVSLNAD 685



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S     ++L L N     IE  P  +  L +L  L+L++N++  +P  +  L +L+ L
Sbjct: 232 EISQLGNIKELFLNNNC---IEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRAL 288

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+   P ++  L  L+ L+L GN I++LP  +  L  LE+L L  N L+ L   I
Sbjct: 289 NLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEI 348

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L+ +K+L +  N LE + + I     LR L +D N LK +PE +     LE LS+  N
Sbjct: 349 FLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDN 408

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  +  L +LR+L ++ N L  +PE +     +  +    NF  +   P  I + 
Sbjct: 409 KLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNF--ITDFPIEIKSC 466

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + + ++++S N+I   P     L  L  L +  N +   P +I
Sbjct: 467 KNIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYISEIPVDI 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P SI  + SL  L L  N++   P  +  L +L+ LDL  N+I  +P  I +L 
Sbjct: 546 NKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLK 605

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN---LSSLPDSIGSLISLKKLIVETND 219
            +  L++  NQ    PV L  L  LEEL++   N   L+ LP+ + ++  LK L +  N 
Sbjct: 606 GIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNA 665

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P  IG+  SL  L  D N+++ LP +   ++ L+ L++  NN+  LP+ + +L SL
Sbjct: 666 IREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSL 725

Query: 280 RELDVSFNELESVPESLCFATTL 302
           +E++   N L   P  +C    L
Sbjct: 726 KEINFDDNPLLRPPMEICKGKQL 748



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 3/256 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L++N++  +   I     L+ L L  N + ++P++I     L  L L  N+++ LP  
Sbjct: 357 LQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKN 416

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L +L +  N L  +P+ I  L ++  L    N + + P  I  C ++ ++ + Y
Sbjct: 417 IHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSY 476

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++   P  +  + +L  LS+  N I ++P  +S    L  L+ + N+L    E LC   
Sbjct: 477 NKIMYFPLGLCALDSLYYLSLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEHLCSLI 536

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++G N   +R +P SI N+  L  L +  N++   P     L  LRVL + EN +
Sbjct: 537 NLEYLDLGKN--KIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQI 594

Query: 361 EVPPRNIVEM-GAQAV 375
           +  P  I  + G Q +
Sbjct: 595 QTIPSEICNLKGIQKL 610



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 10/284 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  I  L +L  L++S N+I  +P  I  L ++K+L L+ N I + P  +  L 
Sbjct: 201 NGLSTLPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLK 260

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  N++  +P ALS L  L  L+L  N L+  P ++  L  L  L +  N +  
Sbjct: 261 NLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINS 320

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +  +L +L +D+N+L  L   +  +  ++ L +  N ++ +   + +   LR L
Sbjct: 321 LPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRIL 380

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L+ +PE++     L  +++ +N   L  LP++I  L+ L +L I+ N +  +P+
Sbjct: 381 ILDKNLLKDMPENISHCAVLECLSLSDN--KLTELPKNIHKLKNLRKLHINRNYLVKIPE 438

Query: 343 SFRMLSRLRVLRVQEN-----PLEVPP-RNI--VEMGAQAVVQY 378
               L+ +  L    N     P+E+   +NI  VE+    ++ +
Sbjct: 439 YISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYF 482



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE---NRIVAVPATIGGLSSL 141
           E+ + KG + LN+ N   +   + P  +  L SL  L++S+    ++  +P  +  ++ L
Sbjct: 600 EICNLKGIQKLNISN---NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKL 656

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K LD+  N I E+P +IG+L SLV L+   NQI  LP +   L  L++L+L  NNLS LP
Sbjct: 657 KGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLP 716

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
             I +L SLK++  + N L   P  I +   L
Sbjct: 717 SGIYNLFSLKEINFDDNPLLRPPMEICKGKQL 748



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 4/164 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL---HANRIIELPDSIG 159
           + I+ +P  I  L  +  L++S N+ +  P  +  L SL++L++   +  ++  LP+ + 
Sbjct: 592 NQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELS 651

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           ++  L  LD+  N I  +P  +  L  L  L+  +N +  LP S  SL +L++L +  N+
Sbjct: 652 NMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNN 711

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           L  LP  I    SL+E+  D N L   P  + K   L  ++ RY
Sbjct: 712 LSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA-RY 754



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +E+   +   +LN+       +  LP+ +  ++ L  LD+S N I  +P  IG L SL  
Sbjct: 622 VELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVS 681

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           L+   N+I  LP S   L +L  L+L GN +S LP  +  L  L+E++   N
Sbjct: 682 LNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDN 733


>gi|348553815|ref|XP_003462721.1| PREDICTED: protein LAP2-like isoform 1 [Cavia porcellus]
          Length = 1455

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N  +L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSNKLEL--LPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|354474057|ref|XP_003499248.1| PREDICTED: protein LAP2 [Cricetulus griseus]
          Length = 1448

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+  ++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 DTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNFLQQLPPEIGNWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 150/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++  +  N L+ LP+ +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYLPDSIGGLRSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +NF  L+ LP  IGN + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSVGQLTNIRTFAADHNF--LQQLPPEIGNWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P +  ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSD 400



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/331 (30%), Positives = 160/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLRQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++  +S N L+ +P+++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDEN--QLMYLPDSIGGLRSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSVGQLTNIRTFAADHNFLQQLPP 339



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 132/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLR 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++  L SN+L  LPD+IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 73/234 (31%), Positives = 114/234 (48%), Gaps = 15/234 (6%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLIK--LASLIEVSSKKGTRDL 95
           LT    L LGS  F  +VP ++  +  + +   DG +L+ I   + SL         R L
Sbjct: 183 LTQLERLDLGSNEF-TEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSL---------RQL 232

Query: 96  NLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP 155
              +   +NIE + + I    +L    LS N +  +P TIG L ++  L +  N+++ LP
Sbjct: 233 TYLDVSKNNIEMVEEGISTCENLQDFLLSSNSLQQLPDTIGSLKNVTTLKIDENQLMYLP 292

Query: 156 DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
           DSIG L S+  LD   N+I ALP ++ +L  +       N L  LP  IG+  ++  L +
Sbjct: 293 DSIGGLRSIEELDCSFNEIEALPSSVGQLTNIRTFAADHNFLQQLPPEIGNWKNITVLFL 352

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
            +N LE LP  +G    L+ + +  NRLK LP +  K+  L  + +  N  K L
Sbjct: 353 HSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|348553817|ref|XP_003462722.1| PREDICTED: protein LAP2-like isoform 2 [Cavia porcellus]
          Length = 1381

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 104/331 (31%), Positives = 162/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLMSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N+I  LP S   L+ +R      N L ++PP
Sbjct: 309 NEIEALPSSIGQLNNIRTFAADHNYLQQLPP 339



 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 153/254 (60%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N  +L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGNWKNVTVLFLHSNKLEL--LPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ S +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLMSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+     +      +N+  L+ LP  IGN + +  L + +N++ +LP+  
Sbjct: 307 SFNEIEALPSSIGQLNNIRTFAADHNY--LQQLPPEIGNWKNVTVLFLHSNKLELLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKESDSETQ 418



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFSEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G+++ +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLMSIEELDCSFNEIEALPSSIGQLNNIRTFAADHNYLQQLPPEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE +PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLELLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 146/260 (56%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IGKL +L +L L+EN +  +P  I  L +L  LDL+ N++  LP+ IG L +L  L
Sbjct: 55  IPKEIGKLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKEL 114

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +L GNQ++ LP ++ +L  LE L+L  N L++LP+ I  L SL+ L +  N+++ LP  I
Sbjct: 115 NLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEI 174

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q S+L  L +  N++K L     ++  L+ L++  N ++  P  +  L SL  L++++N
Sbjct: 175 SQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
             + +PE +     L  + +  N   L +LP  IG LE LE L +  N++  LP     L
Sbjct: 235 RFKILPEEILQLENLQVLELTGN--QLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHL 292

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+++ +++N L   P  I
Sbjct: 293 RSLKIVHLEQNRLTAIPEEI 312



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/273 (33%), Positives = 147/273 (53%), Gaps = 2/273 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP+ IG   +L  L L  NR+ A+P  IG L +L+ L L  N +  +P+ I  L +L
Sbjct: 29  LETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNL 88

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N++  LP  + +L  L+EL+L  N L+ LP SIG L +L+ L +  N L  LP
Sbjct: 89  ATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLP 148

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I    SL+ L +  N +K+LP+ + ++  L  L +  N IK+L      L +L+ L++
Sbjct: 149 EEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNL 208

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+LE+ P  +    +L  +N+  N+   + LP  I  LE L+ L+++ NQ+  LP+  
Sbjct: 209 LDNKLENFPADIVQLKSLEFLNL--NYNRFKILPEEILQLENLQVLELTGNQLTSLPEGI 266

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
             L +L  L ++ N L   P+ I  + +  +V 
Sbjct: 267 GRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVH 299



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 129/228 (56%), Gaps = 2/228 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP+ IGKL +L  L+LS N++  +P +IG L +L+ L+L  N++  LP+ I  L 
Sbjct: 96  NKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLK 155

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L+L  N+I +LP  +S+L  L  LDLG N +  L      L +LK L +  N LE 
Sbjct: 156 SLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLEN 215

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  I Q  SL  L ++YNR K LPE + ++  L+VL +  N +  LP  +  L  L  L
Sbjct: 216 FPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESL 275

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
            +  N L ++P+ +    +L  +++  N   L A+P  IG+L+ L+EL
Sbjct: 276 FLEGNRLTTLPKGIEHLRSLKIVHLEQN--RLTAIPEEIGSLQNLKEL 321



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/260 (33%), Positives = 137/260 (52%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L  S+   S +  LD+S   +  +P  IG   +L+KL L  NR+  +P  IG L +L  L
Sbjct: 9   LEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETL 68

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  +P  + +L  L  LDL  N L  LP+ IG L +LK+L +  N L  LP +I
Sbjct: 69  ILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSI 128

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L  L +  N+L  LPE +  + +L++L++  N IK LP  +S LS+L  LD+  N
Sbjct: 129 GQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKN 188

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +++ +         L  +N+ +N   L   P  I  L+ LE L+++ N+ ++LP+    L
Sbjct: 189 KIKRLSLDFKRLQNLKSLNLLDN--KLENFPADIVQLKSLEFLNLNYNRFKILPEEILQL 246

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L+VL +  N L   P  I
Sbjct: 247 ENLQVLELTGNQLTSLPEGI 266



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 88/156 (56%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           V + +LE LP  IG   +L +L +  NRL A+P+ +GK+  LE L +  N +K +P  + 
Sbjct: 24  VSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIE 83

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L  LD+  N+L+ +P  +     L ++N+  N   L  LP SIG L+ LE L++  
Sbjct: 84  QLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGN--QLTVLPPSIGQLQNLEILELFR 141

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NQ+  LP+    L  L++L + EN ++  P+ I ++
Sbjct: 142 NQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQL 177



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/117 (38%), Positives = 71/117 (60%), Gaps = 1/117 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L+DN +E  P  I +L SL  L+L+ NR   +P  I  L +L+ L+L  N++  LP+ IG
Sbjct: 208 LLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIG 267

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
            L  L  L L GN+++ LP  +  L  L+ + L  N L+++P+ IGSL +LK+L ++
Sbjct: 268 RLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQ 324



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 51/89 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+ I +L +L  L+L+ N++ ++P  IG L  L+ L L  NR+  LP  I  L SL  +
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIV 298

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNN 196
            L  N+++A+P  +  L  L+EL L   N
Sbjct: 299 HLEQNRLTAIPEEIGSLQNLKELYLQDFN 327


>gi|390339446|ref|XP_003725006.1| PREDICTED: protein scribble homolog [Strongylocentrotus purpuratus]
          Length = 434

 Score =  132 bits (333), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 133/237 (56%), Gaps = 2/237 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP  IG +S+L++++L EN +  +P ++  L  L+ LDL +N + ELP+++G L +L
Sbjct: 107 LESLPQDIGSMSNLIAMELRENLLKVLPDSLSFLVKLETLDLGSNELEELPETLGALPNL 166

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LP  +  L  L  LD+  NNL  LPD IG L SL  L +  N LE+LP
Sbjct: 167 SELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLPDEIGGLQSLTDLTLSQNCLEKLP 226

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+   L  L++D NRL  L  A+G    ++ L +  N ++++P T+ SL  L   +V
Sbjct: 227 EGIGKLKDLSILKIDQNRLITLTPAIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNV 286

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
             N L  +P  +   T L  +++ +N   L  LP  +G L  L  LD+  N++  LP
Sbjct: 287 DRNRLTQLPAQIGKCTRLGVLSLRDN--RLLRLPPELGQLRELHVLDVCGNRLDWLP 341



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/277 (33%), Positives = 140/277 (50%), Gaps = 25/277 (9%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L++L  L LS+N +  +PA IG   +L +LD+  N I+E+PD+I    +L  +D  GN 
Sbjct: 24  RLTNLRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNP 83

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGS-----------------------LISL 210
           +S LP   ++L  L  L L   +L SLP  IGS                       L+ L
Sbjct: 84  LSRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENLLKVLPDSLSFLVKL 143

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           + L + +N+LEELP T+G   +L EL +D N+L  LP  +G +  L  L V  NN++ LP
Sbjct: 144 ETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLGNLTCLDVSENNLQCLP 203

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +  L SL +L +S N LE +PE +     L  + I  N   L  L  +IG+ E ++EL
Sbjct: 204 DEIGGLQSLTDLTLSQNCLEKLPEGIGKLKDLSILKIDQN--RLITLTPAIGSCENMQEL 261

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            ++ N ++ +P +   L  L    V  N L   P  I
Sbjct: 262 ILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQI 298



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 84/165 (50%), Gaps = 2/165 (1%)

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L +L+ L +  N+LE LP  IG   +L EL V  N +  +P+ +     L ++    N +
Sbjct: 25  LTNLRILGLSDNELERLPAEIGNFMNLLELDVSRNDIMEIPDNIKFCKALTIVDFSGNPL 84

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
            +LP   + L  LR L ++   LES+P+ +   + L+ M +  N   L+ LP S+  L  
Sbjct: 85  SRLPPGFTQLHDLRHLTLNDVSLESLPQDIGSMSNLIAMELRENL--LKVLPDSLSFLVK 142

Query: 327 LEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           LE LD+ +N++  LP++   L  L  L +  N L + P  I  +G
Sbjct: 143 LETLDLGSNELEELPETLGALPNLSELWLDCNQLTILPPEIGNLG 187



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 62/121 (51%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L+     L  +IG   ++  L L+EN +  +P TIG L  L   ++  NR+ +LP  
Sbjct: 242 QNRLIT----LTPAIGSCENMQELILTENLLQEIPPTIGSLRHLNNFNVDRNRLTQLPAQ 297

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG    L  L LR N++  LP  L +L  L  LD+  N L  LP  + +  +LK L +  
Sbjct: 298 IGKCTRLGVLSLRDNRLLRLPPELGQLRELHVLDVCGNRLDWLPIQLAN-CNLKALWLSE 356

Query: 218 N 218
           N
Sbjct: 357 N 357


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I    +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L +  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
              +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 GCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NELEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L +  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNELE++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNELEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N L+ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|443730785|gb|ELU16143.1| hypothetical protein CAPTEDRAFT_182426 [Capitella teleta]
          Length = 610

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 152/273 (55%), Gaps = 4/273 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           L + I +L +L  LD+ +N++ ++P  +  L +L+KL+L  N +  LP+SI  L  L +L
Sbjct: 99  LSEDIAQLPALTVLDVHDNQLNSLPEALCQLENLQKLNLSHNSLKALPESICQLPRLQFL 158

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            ++ NQ+ ALP  + RL  LEELD   N L +LP SI  L  + K  +  N+L  + H I
Sbjct: 159 YIQNNQLEALPEDIGRLALLEELDASHNKLPTLPTSIKFLERVMKFNMSNNNLNVIVHEI 218

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                LR L   +N+L  LP+ +G ++ LE L +R+N +  LP ++   ++L+EL +  N
Sbjct: 219 SGMQGLRTLDATHNQLHTLPDDLGHLNKLEQLYLRHNRLTHLP-SLQHCTALKELHLGNN 277

Query: 288 ELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
            ++ +  E L    ++  +++ +N   L  +P  I  L+MLE LD++NN I  LP     
Sbjct: 278 AIQGLSEEQLREMHSVSVLDLRDN--RLTKVPSEIVLLQMLERLDLTNNNISALPYELGT 335

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           L  L+ + +  NPL+   R+I+  G   + +Y+
Sbjct: 336 LPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYL 368



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 84/340 (24%), Positives = 158/340 (46%), Gaps = 58/340 (17%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           ++L+L N  +  +    + + ++ S+  LDL +NR+  VP+ I  L  L++LDL  N I 
Sbjct: 270 KELHLGNNAIQGLS--EEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNIS 327

Query: 153 ELPDSIGDLLSLVYLDLRGNQISAL------------------------PVALSRLVRLE 188
            LP  +G L +L  + L GN + ++                        P A    V+  
Sbjct: 328 ALPYELGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSS 387

Query: 189 E-----------------------LDLGSNNLSSLPDSIGSLISLKKLIV---ETNDLEE 222
           +                       LD     ++++PD + ++     + +     N L +
Sbjct: 388 KGTSGIVGGASSGVDPHLVSSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQ 447

Query: 223 LPHTIGQCS-SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            P  I     SL EL + +N+L  +  ++G +  L +L +  N +  LP  +S+ SSLRE
Sbjct: 448 YPKQIESLKDSLCELNLSFNKLTTIDASIGCLSRLVMLDLGGNQLLSLPAELSNASSLRE 507

Query: 282 LDVSFNELESVPESLCFATTLVKMNIG--NNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           L +SFN   S+P S+ ++   +++ +   N  A++ A  + + +L  L  LD+ NN IR 
Sbjct: 508 LVISFNRFTSIP-SVVYSLPCLEIILAGSNQIAEIDA--QGLKSLAQLATLDLQNNDIRQ 564

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +P    ++++LR L+++ N +  P   I+  G  A+++Y+
Sbjct: 565 VPPELGLVTQLRSLQLEGNAIRQPRPAILSKGTLAILEYL 604



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 88/360 (24%), Positives = 155/360 (43%), Gaps = 87/360 (24%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S  +G R L+  +   + +  LPD +G L+ L  L L  NR+  +P ++   ++LK+L
Sbjct: 217 EISGMQGLRTLDATH---NQLHTLPDDLGHLNKLEQLYLRHNRLTHLP-SLQHCTALKEL 272

Query: 145 DLHANRIIELPD-SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
            L  N I  L +  + ++ S+  LDLR N+++ +P  +  L  LE LDL +NN+S+LP  
Sbjct: 273 HLGNNAIQGLSEEQLREMHSVSVLDLRDNRLTKVPSEIVLLQMLERLDLTNNNISALPYE 332

Query: 204 IGSLISLKKLIVETNDLEEL---------------------------------------- 223
           +G+L +LK ++++ N L+ +                                        
Sbjct: 333 LGTLPNLKSIVLDGNPLKSIRRDIIMRGTNELKKYLRSRMAESAPTAPQSAVQSSKGTSG 392

Query: 224 ----------PHTIGQCSSLRELRVDYNRLKALPE---AVGKIHTLEVLSVRYNNIKQLP 270
                     PH +   SS + L     ++ A+P+   AV +   + +++   N + Q P
Sbjct: 393 IVGGASSGVDPHLV---SSSKALDYSEKKVTAIPDELWAVAQSGGVTIVNFSKNQLTQYP 449

Query: 271 TTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
             + SL  SL EL++SFN+L ++  S                         IG L  L  
Sbjct: 450 KQIESLKDSLCELNLSFNKLTTIDAS-------------------------IGCLSRLVM 484

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAK 389
           LD+  NQ+  LP      S LR L +  N     P  +  +    ++   ++ + + DA+
Sbjct: 485 LDLGGNQLLSLPAELSNASSLRELVISFNRFTSIPSVVYSLPCLEIILAGSNQIAEIDAQ 544


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 88/304 (28%), Positives = 148/304 (48%), Gaps = 57/304 (18%)

Query: 61  MIMCMCCVGQDGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVS 120
           +++C CC                IE   K             D    LP+++   + +  
Sbjct: 22  ILLCFCCT---------------IEADEK-------------DKYYNLPEALQHPTDVRV 53

Query: 121 LDLS----ENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA 176
           LDL      N++  +P  IG L +L++L+L++N+   LP+ IG+L  L  LDL  ++++ 
Sbjct: 54  LDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTT 113

Query: 177 LPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLREL 236
           LP  + +L +L++L+L  N L +LP  IG L +LK L +  N+L  LP  IG    L+ L
Sbjct: 114 LPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTL 173

Query: 237 RVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  N+LK LP+ + K+  LE L +  N +  LP  + +L +L+EL+++ N+  ++PE  
Sbjct: 174 DLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE- 232

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
                                   IGNL+ LE L++S N +   P+    L +L+ L + 
Sbjct: 233 ------------------------IGNLQSLESLNLSGNSLTSFPEEIGKLQKLKWLYLG 268

Query: 357 ENPL 360
            NP 
Sbjct: 269 GNPF 272



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 132/228 (57%), Gaps = 6/228 (2%)

Query: 147 HANRIIELPDSIGDLLSLVYLDLR----GNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
             ++   LP+++     +  LDL     GNQ++ LP  +  L  L+EL+L SN  ++LP+
Sbjct: 34  EKDKYYNLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTTLPE 93

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            IG+L  L+KL +  + L  LP  IG+   L++L +  N+LK LP+ +GK+  L+ LS+ 
Sbjct: 94  EIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLN 153

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N +  LP  + +L  L+ LD++ N+L+++P+ +     L  +++GNN  +L  LP+ IG
Sbjct: 154 GNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNN--ELTTLPKEIG 211

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NL+ L+EL++++NQ   LP+    L  L  L +  N L   P  I ++
Sbjct: 212 NLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFPEEIGKL 259


>gi|354478360|ref|XP_003501383.1| PREDICTED: leucine-rich repeat-containing protein 40 [Cricetulus
           griseus]
 gi|344250474|gb|EGW06578.1| Leucine-rich repeat-containing protein 40 [Cricetulus griseus]
          Length = 602

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/290 (33%), Positives = 166/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  NR+  LP+ I  L 
Sbjct: 92  NKLQSLSDDLRLLPALTVLDIHDNQLTSLPSAIRELDNLQKLNVSHNRLNMLPEEITSLK 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    RL  LE+LDL +N L+++P     L SL +L + +N L+ 
Sbjct: 152 NLKVLHLQHNELTGIPEGFERLSGLEDLDLSNNRLATVPAGFALLSSLLRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  D N L+ +P  VG + +LE+L +R N ++ LP   SS   L+EL
Sbjct: 212 LPAEISRMQRLKHLDCDSNLLETVPPDVGSMESLELLYLRRNKLRVLPEFPSS-RQLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            +  N++E++  E L     ++ +++  N   LR++P  +  L+ LE LD+SNN I  LP
Sbjct: 271 HLGENQIETLGAEHLQQLQAILVLDLRGN--KLRSVPEEMALLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q
Sbjct: 329 CSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKI-KDDGTSQ 376



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 94/352 (26%), Positives = 157/352 (44%), Gaps = 52/352 (14%)

Query: 79  KLASLIEVSSKKGTRDLNLQNKLMDNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           KL  L E  S +  ++L+L     + IE L  + + +L +++ LDL  N++ +VP  +  
Sbjct: 254 KLRVLPEFPSSRQLKELHLGE---NQIETLGAEHLQQLQAILVLDLRGNKLRSVPEEMAL 310

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGN------------------------- 172
           L SL++LDL  N I  LP S+G+L  L +L L GN                         
Sbjct: 311 LQSLERLDLSNNDISSLPCSLGNL-HLKFLALEGNPLRTIRREIIAKGTQEVLKYLRSKI 369

Query: 173 ------QISALP-----------VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI- 214
                 Q  ++P           V +  +V L+ LD      + +PD +        +I 
Sbjct: 370 KDDGTSQNDSVPETAMTLPSESRVNIHAIVTLKLLDYSDKQATLIPDDVFDAAKSNTIIS 429

Query: 215 --VETNDLEELPHTIGQCSSL-RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
                N L E+P  I +   +  ++ + +N+L  + +    +  L  L +R N +  LP 
Sbjct: 430 VNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFISQEFCLLQKLTFLDLRNNFLNSLPE 489

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            MSSL+ L+ +++SFN  + +P  L    TL  + I NN       P+ +  +E L  LD
Sbjct: 490 EMSSLTKLQTINLSFNRFKVLPAVLYHIPTLEAVLISNNQVG-SVDPQKVKLMENLSTLD 548

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLV 383
           + NN +  +P       +LR L +  NP  VP   I+  G  AV++Y+ D +
Sbjct: 549 LQNNDLLQVPPELGNCVQLRTLLLDGNPFRVPRAAILMKGTAAVLEYLRDRI 600


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/290 (32%), Positives = 166/290 (57%), Gaps = 6/290 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L+KL++  N++  LP+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHNKLKILPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LDL +N L+++P S   L SL +L + +N L+ 
Sbjct: 152 NLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  +     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 212 LPAELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRNKLRFLP-EFPSCKLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEKLGAEHLKHLNSILVLDLRDN--KLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQ 391
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q
Sbjct: 329 CSLGRL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQ 376



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 86/321 (26%), Positives = 145/321 (45%), Gaps = 50/321 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L  L +L L
Sbjct: 283 EHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLAL 341

Query: 170 RGNQISA--------------------------------------LP----VALSRLVRL 187
            GN +                                        LP    V +  ++ L
Sbjct: 342 EGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTL 401

Query: 188 EELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RELRVDYNRL 243
           + LD      + +PD +   +    +  +    N L E+P  I +   +  ++ + YN+L
Sbjct: 402 KMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSDVNLSYNKL 461

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
            ++   +  +  L  L +R N +  LP  M SL+ L+ +++SFN  + +PE L    TL 
Sbjct: 462 SSISLELCTLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNRFKILPEVLYRIPTLE 521

Query: 304 KMNIGNNFADLRAL-PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            + I NN   + AL P+ +  +E L  LD+ NN +  +P        LR L +  NP  V
Sbjct: 522 TVLISNN--QVGALDPQKMKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRV 579

Query: 363 PPRNIVEMGAQAVVQYMADLV 383
           P   I+  G  A+++Y+ D +
Sbjct: 580 PRAAILMKGTAAILEYLRDRI 600



 Score = 47.4 bits (111), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 56/109 (51%), Gaps = 2/109 (1%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L  L +  N ++ L   +  L +L  LD+  N+L S+P ++     L K+N+ +N   L+
Sbjct: 84  LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQKLNVSHN--KLK 141

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            LP  I NL  L+ L + +N++  +P+ F  LS L  L +  N L   P
Sbjct: 142 ILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVP 190


>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 349

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/253 (35%), Positives = 137/253 (54%), Gaps = 2/253 (0%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++  P +I KL +L  L+L  N+I ++P  IG L +LK+LDL  N++  LP  IG+L +
Sbjct: 53  NLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKN 112

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  N+IS LP   S    L+ L L  N     PD I  L +L+ L    N L+EL
Sbjct: 113 LEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKEL 172

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  +GQ  +L  L +  N LK LP +  +  +L+ L++ YN  +  P  + SL  L  L+
Sbjct: 173 PEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLE 232

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           ++ N+   +PE +   + L  + +  N   L+ LP++IG L+ LE L +  NQ+  LP+ 
Sbjct: 233 LTGNQFTFLPEEIGNLSNLNSLFLEAN--RLKQLPQNIGKLQNLESLYLQENQLTTLPEE 290

Query: 344 FRMLSRLRVLRVQ 356
              L  L+ L +Q
Sbjct: 291 IGSLQNLKELYLQ 303



 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 91/259 (35%), Positives = 135/259 (52%), Gaps = 4/259 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + I KL +L  L  +   +   P TI  L +LK+L+L  N+I  LP+ IG+L +L  LDL
Sbjct: 36  EEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDL 95

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
             NQ+++LPV +  L  LE L L  N +S LP       +LK L +  N   + P  I Q
Sbjct: 96  SDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQ 155

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L  L    N+LK LPE +G++  L +L +  N +K LP++ S   SL+ L++++N  
Sbjct: 156 LQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRF 215

Query: 290 ESVPESLCFATTLVKMNI-GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           +  P+ L     L  + + GN F     LP  IGNL  L  L +  N+++ LP +   L 
Sbjct: 216 QVFPKELISLKKLETLELTGNQFT---FLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQ 272

Query: 349 RLRVLRVQENPLEVPPRNI 367
            L  L +QEN L   P  I
Sbjct: 273 NLESLYLQENQLTTLPEEI 291



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/281 (30%), Positives = 143/281 (50%), Gaps = 5/281 (1%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           ++  +  ++LNL     + I  LP+ IG+L +L  LDLS+N++ ++P  IG L +L+ L 
Sbjct: 61  ITKLRNLKELNLG---RNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILT 117

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG 205
           L+ NRI  LP       +L  L L  N+    P  + +L  LE LD   N L  LP+ +G
Sbjct: 118 LYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLG 177

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +L  L +  N+L+ LP +  +  SL+ L ++YNR +  P+ +  +  LE L +  N 
Sbjct: 178 QLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQ 237

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
              LP  + +LS+L  L +  N L+ +P+++     L  + +  N   L  LP  IG+L+
Sbjct: 238 FTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESLYLQEN--QLTTLPEEIGSLQ 295

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRN 366
            L+EL +  +      +  ++   L    +    +  PPRN
Sbjct: 296 NLKELYLQGSNFFSEKEKEKIQKLLPKCEIHFESVSKPPRN 336



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 106/226 (46%), Gaps = 25/226 (11%)

Query: 156 DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV 215
           + I  L +L  L   G  +   P  +++L  L+EL+LG N +SSLP+ IG L +LK+L +
Sbjct: 36  EEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDL 95

Query: 216 ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSS 275
             N L  LP  IG   +L  L +  NR+  LP+       L++L +  N  ++ P  +  
Sbjct: 96  SDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQ 155

Query: 276 LSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN 335
           L +L  LD S N+L+ +PE L                         G L+ L  L +  N
Sbjct: 156 LQNLEWLDFSENQLKELPEKL-------------------------GQLQNLNILYLLGN 190

Query: 336 QIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           +++VLP SF     L+ L +  N  +V P+ ++ +     ++   +
Sbjct: 191 ELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGN 236



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 91/179 (50%), Gaps = 2/179 (1%)

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L S +L S  + I  L +L++LI    +L+  P TI +  +L+EL +  N++ +LPE +G
Sbjct: 26  LDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIG 85

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNF 311
           ++  L+ L +  N +  LP  + +L +L  L +  N +  +P+       L  + +  N 
Sbjct: 86  ELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQN- 144

Query: 312 ADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
              R  P  I  L+ LE LD S NQ++ LP+    L  L +L +  N L+V P +  E 
Sbjct: 145 -KFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEF 202



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 78/138 (56%), Gaps = 2/138 (1%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +D   LK+  E + K+  LE L     N+K  P T++ L +L+EL++  N++ S+
Sbjct: 21  VRTLVLDSFDLKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSL 80

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
           PE +     L ++++ +N   L +LP  IGNL+ LE L +  N+I VLP  F +   L++
Sbjct: 81  PEEIGELQNLKELDLSDN--QLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKI 138

Query: 353 LRVQENPLEVPPRNIVEM 370
           L + +N     P  I+++
Sbjct: 139 LYLSQNKFRKFPDEILQL 156


>gi|403259517|ref|XP_003922256.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Saimiri boliviensis
           boliviensis]
          Length = 582

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L RL  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 43.1 bits (100), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 25/128 (19%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPSSIKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLP------DSF-----------------RMLSRLRVLRVQENPLEV 362
            L  LD+ +N++R +P      DS                  + LSRL +L ++EN ++ 
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFNRITTVEKDIKNLSRLSMLSIRENKIKQ 229

Query: 363 PPRNIVEM 370
            P  I E+
Sbjct: 230 LPAEIGEL 237


>gi|302835578|ref|XP_002949350.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
 gi|300265177|gb|EFJ49369.1| hypothetical protein VOLCADRAFT_89724 [Volvox carteri f.
           nagariensis]
          Length = 383

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/254 (35%), Positives = 140/254 (55%), Gaps = 4/254 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +  ++SL  LD+SEN++  V A IG L+SL +LDLH N +  LP +IG L  + +L
Sbjct: 96  LPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTIGRLTRVKHL 155

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  NQ+ +LP  + +   L  L L +N L  LP  +G L  L +L +  N+LE +P  +
Sbjct: 156 SLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHINELESVPPEL 215

Query: 228 GQCSSLRELRVDYNRLKALPE--AVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
           G+ + L  L +  NRL  LP    +G   +   LS+  N + ++P  + ++  L+EL + 
Sbjct: 216 GRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWLY 275

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L SVP  L     L ++ +  N   L +LPR I  L  L+EL + +N++  LP    
Sbjct: 276 SNQLTSVPSELGRLGELRRLWLDRN--QLTSLPREISGLTRLQELYLDHNRLVELPSELG 333

Query: 346 MLSRLRVLRVQENP 359
            L++LR L ++ NP
Sbjct: 334 ALTQLRRLYLEGNP 347



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 93/283 (32%), Positives = 137/283 (48%), Gaps = 23/283 (8%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +   L  L  L LS N +  +P  IG L  L  L L +N +  LP  +  +  L  L
Sbjct: 27  LPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQLKKL 86

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N +  LP  +  +  LE LD+  N L  +   IG L SL +L + TN L+ LP TI
Sbjct: 87  WLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNVLKGLPPTI 146

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G+ + ++ L + +N+L++LP  +G+  +L  LS+  N +KQLPT M  L+ L  L +  N
Sbjct: 147 GRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHIN 206

Query: 288 ELESVPESLCFATTLVKMNIGNNF-----------------------ADLRALPRSIGNL 324
           ELESVP  L   T L  +++  N                          L  +P  +GN+
Sbjct: 207 ELESVPPELGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELGNM 266

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            +L+EL + +NQ+  +P     L  LR L +  N L   PR I
Sbjct: 267 GLLQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREI 309



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/195 (32%), Positives = 109/195 (55%), Gaps = 3/195 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            + +E LP  IG+ +SLV L L+ N++  +P  +G L+ L +L LH N +  +P  +G L
Sbjct: 159 FNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGELTGLVRLSLHINELESVPPELGRL 218

Query: 162 LSLVYLDLRGNQISALP--VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
             L  L L  N+++ LP  + L        L L  N L  +P  +G++  L++L + +N 
Sbjct: 219 TGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELGNMGLLQELWLYSNQ 278

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L  +P  +G+   LR L +D N+L +LP  +  +  L+ L + +N + +LP+ + +L+ L
Sbjct: 279 LTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNRLVELPSELGALTQL 338

Query: 280 RELDVSFN-ELESVP 293
           R L +  N EL+S+P
Sbjct: 339 RRLYLEGNPELQSLP 353



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT--IGGLSSLKKLDLHANRIIELPDSIG 159
           ++ +E +P  +G+L+ L +L L +NR+  +P    +G   S  +L L+ N++ E+P  +G
Sbjct: 205 INELESVPPELGRLTGLEALSLHKNRLTRLPPELPLGLAGSCCRLSLYENQLGEVPPELG 264

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           ++  L  L L  NQ++++P  L RL  L  L L  N L+SLP  I  L  L++L ++ N 
Sbjct: 265 NMGLLQELWLYSNQLTSVPSELGRLGELRRLWLDRNQLTSLPREISGLTRLQELYLDHNR 324

Query: 220 LEELPHTIGQCSSLRELRVDYN-RLKALPEAV 250
           L ELP  +G  + LR L ++ N  L++LP  V
Sbjct: 325 LVELPSELGALTQLRRLYLEGNPELQSLPPPV 356



 Score = 78.2 bits (191), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/175 (31%), Positives = 92/175 (52%), Gaps = 2/175 (1%)

Query: 196 NLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHT 255
            +S LP +  +L  L+KL +  N L +LP  IG    L  L +  N L++LP  V ++  
Sbjct: 23  GISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGVTQMTQ 82

Query: 256 LEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLR 315
           L+ L +  N + +LP  + +++SL  LDVS N+LE V   +   T+L ++++  N   L+
Sbjct: 83  LKKLWLPANMLVRLPAEVCAITSLEWLDVSENKLEEVCAEIGQLTSLTRLDLHTNV--LK 140

Query: 316 ALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
            LP +IG L  ++ L +  NQ+  LP      + L  L +  N L+  P  + E+
Sbjct: 141 GLPPTIGRLTRVKHLSLHFNQLESLPPDIGQCTSLVWLSLNANQLKQLPTEMGEL 195



 Score = 64.7 bits (156), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 80/154 (51%), Gaps = 2/154 (1%)

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
           +V+   + ELP        L++L +  N L+ LPE +G +  L+ L +  N ++ LP  +
Sbjct: 18  MVDACGISELPPAFFNLPDLQKLWLSNNGLRKLPEEIGNLPQLDSLWLGSNLLRSLPGGV 77

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
           + ++ L++L +  N L  +P  +C  T+L  +++  N   L  +   IG L  L  LD+ 
Sbjct: 78  TQMTQLKKLWLPANMLVRLPAEVCAITSLEWLDVSEN--KLEEVCAEIGQLTSLTRLDLH 135

Query: 334 NNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            N ++ LP +   L+R++ L +  N LE  P +I
Sbjct: 136 TNVLKGLPPTIGRLTRVKHLSLHFNQLESLPPDI 169


>gi|343085920|ref|YP_004775215.1| RHS repeat-associated core domain-containing protein [Cyclobacterium
            marinum DSM 745]
 gi|342354454|gb|AEL26984.1| RHS repeat-associated core domain-containing protein [Cyclobacterium
            marinum DSM 745]
          Length = 3095

 Score =  132 bits (332), Expect = 3e-28,   Method: Composition-based stats.
 Identities = 96/285 (33%), Positives = 164/285 (57%), Gaps = 30/285 (10%)

Query: 94   DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRII 152
            +L+L+N  +     LP+ IG L++L  L + EN +  ++PA+IG L+ L  L+L  + + 
Sbjct: 787  ELDLKNNNLTGT--LPNEIGDLTNLKVLGIHENSLSGSIPASIGSLTELTYLNLSQDSLS 844

Query: 153  -ELPDSIGDLLSLVYLDLRGNQIS-ALPVALSRLVRLEELDLGSNNLS-SLPDSIGSLIS 209
              +PDS+G+L +L YL LR N  + A+P +L  L +L++L L +N L+ S+PD++ SLI+
Sbjct: 845  GSIPDSLGNLTNLTYLSLRNNGFTGAIPESLGNLNKLDQLYLSTNTLTGSIPDTLASLIN 904

Query: 210  LKKLIVETNDLE-ELPHTIGQCSSLRELRVDYNRLK-ALPEAVGKIHTLEVLSVRYNNIK 267
            LK L + +N+L  ++P  +G  ++L E RV  N L  ++PE  G +  LE L +  N + 
Sbjct: 905  LKALYLFSNNLTGQIPSVLGDLTALEEFRVGSNSLTGSIPETFGNLINLEQLHMDKNQLS 964

Query: 268  -QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIG--NNFADLRA-------- 316
             ++P+++ +L +L  +++S N L          T  + ++IG  N   DLR         
Sbjct: 965  GEIPSSIGNLENLVGMNLSTNNL----------TGQIPVSIGNLNKLTDLRLNVNHLSGN 1014

Query: 317  LPRSIGNLEMLEELDISNNQ-IRVLPDSFRMLSRLRVLRVQENPL 360
            +P S+GNL+ L+ L +  N+ I  +P +   +S LRVL +  N L
Sbjct: 1015 IPFSLGNLDKLDRLVLDRNELIGSIPGTIGNMSTLRVLYLYNNKL 1059



 Score =  114 bits (286), Expect = 7e-23,   Method: Composition-based stats.
 Identities = 90/293 (30%), Positives = 154/293 (52%), Gaps = 36/293 (12%)

Query: 108  LPDSIGKLSSLVSLDLSENRIV-AVPATIGGLSSLKKLDLHANRII-ELPDSIGDLLSLV 165
            +PDS+G L++L  L L  N    A+P ++G L+ L +L L  N +   +PD++  L++L 
Sbjct: 847  IPDSLGNLTNLTYLSLRNNGFTGAIPESLGNLNKLDQLYLSTNTLTGSIPDTLASLINLK 906

Query: 166  YLDLRGNQISA-LPVALSRLVRLEELDLGSNNLS-SLPDSIGSLISLKKLIVETNDLE-- 221
             L L  N ++  +P  L  L  LEE  +GSN+L+ S+P++ G+LI+L++L ++ N L   
Sbjct: 907  ALYLFSNNLTGQIPSVLGDLTALEEFRVGSNSLTGSIPETFGNLINLEQLHMDKNQLSGE 966

Query: 222  -----------------------ELPHTIGQCSSLRELRVDYNRLKA-LPEAVGKIHTLE 257
                                   ++P +IG  + L +LR++ N L   +P ++G +  L+
Sbjct: 967  IPSSIGNLENLVGMNLSTNNLTGQIPVSIGNLNKLTDLRLNVNHLSGNIPFSLGNLDKLD 1026

Query: 258  VLSVRYNN-IKQLPTTMSSLSSLRELDVSFNELE-SVPESLCFATTLVKMNI-GNNFADL 314
             L +  N  I  +P T+ ++S+LR L +  N+L  ++P SL   T L  + + GN    +
Sbjct: 1027 RLVLDRNELIGSIPGTIGNMSTLRVLYLYNNKLTGTIPASLGNLTKLQNIAMFGNEMEGI 1086

Query: 315  RALPRSIGNLEMLEELDISNNQIR-VLPDSFRMLSRLRVLRVQENPLEVPPRN 366
              +P ++GNL +L+EL +  NQ    LP S   +S L  +  + N L  P  N
Sbjct: 1087 --IPETLGNLTLLKELRLETNQFTGTLPASIGEISSLENVSFRGNNLHGPVPN 1137



 Score = 45.4 bits (106), Expect = 0.046,   Method: Composition-based stats.
 Identities = 34/107 (31%), Positives = 51/107 (47%), Gaps = 26/107 (24%)

Query: 259  LSVRYNNIK-QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            +S+ +NN+  Q+PT +S+ SSL  L +                       GNN     ++
Sbjct: 1871 ISLAHNNLTGQIPTQISTFSSLENLFLD----------------------GNNLTG--SI 1906

Query: 318  PRSIGNLEMLEELDISNNQIR-VLPDSFRMLSRLRVLRVQENPLEVP 363
            P S+G+L  L  LD+S N     LP SF  L+ L  LR+ +N L+ P
Sbjct: 1907 PSSMGSLTSLINLDLSENDFTGTLPSSFSSLTNLLYLRIYDNELQGP 1953



 Score = 43.1 bits (100), Expect = 0.25,   Method: Composition-based stats.
 Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 6/86 (6%)

Query: 162  LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS-SLPDSIGSLISLKKLIVETNDL 220
            +SL + +L G     +P  +S    LE L L  NNL+ S+P S+GSL SL  L +  ND 
Sbjct: 1871 ISLAHNNLTGQ----IPTQISTFSSLENLFLDGNNLTGSIPSSMGSLTSLINLDLSENDF 1926

Query: 221  E-ELPHTIGQCSSLRELRVDYNRLKA 245
               LP +    ++L  LR+  N L+ 
Sbjct: 1927 TGTLPSSFSSLTNLLYLRIYDNELQG 1952



 Score = 41.2 bits (95), Expect = 0.94,   Method: Composition-based stats.
 Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 3/84 (3%)

Query: 117  SLVSLDLSENRIVA-VPATIGGLSSLKKLDLHANRII-ELPDSIGDLLSLVYLDLRGNQI 174
            ++  + L+ N +   +P  I   SSL+ L L  N +   +P S+G L SL+ LDL  N  
Sbjct: 1867 NITGISLAHNNLTGQIPTQISTFSSLENLFLDGNNLTGSIPSSMGSLTSLINLDLSENDF 1926

Query: 175  SA-LPVALSRLVRLEELDLGSNNL 197
            +  LP + S L  L  L +  N L
Sbjct: 1927 TGTLPSSFSSLTNLLYLRIYDNEL 1950


>gi|260789701|ref|XP_002589884.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
 gi|229275068|gb|EEN45895.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
          Length = 341

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 152/322 (47%), Gaps = 48/322 (14%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           +SIG+L  L  LD  +N++ ++P  I  L +L++L L  N + ELP  +G+L  L +L +
Sbjct: 20  ESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNTLTELPSEVGELKKLGWLYI 79

Query: 170 RGNQI-----------------------SALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             NQ+                       S LP    +L  L +L +G N L+ L   + S
Sbjct: 80  NDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNLTKLYVGGNKLTELSSGVCS 139

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNI 266
           L  L+ ++V  N L  LP  + +  +L EL +D N+ + LP  V  +  LEVL V  N I
Sbjct: 140 LQHLETVVVSNNKLSTLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNPI 199

Query: 267 KQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEM 326
           + LP  + +L  L+ L +   + E  P  +     L  + + NN   L ALP ++  L+ 
Sbjct: 200 RFLPDEIKNLIRLKSLTIISCQFEEFPRPIGDLEQLRYLALSNN--KLSALPPTMDKLKR 257

Query: 327 LEEL-----------------------DISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
           L ++                       DI NN+I  +P S   LSRL+ L V  NPL+ P
Sbjct: 258 LRDVYLYENKFKTFPEVLCSLPKLMVVDIRNNRISKIPSSLSHLSRLKRLVVAGNPLKYP 317

Query: 364 PRNIVEMGAQAVVQYMADLVEK 385
           P ++ E G+  ++ ++ D  EK
Sbjct: 318 PADVCEKGSDDILAFLKDEAEK 339



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 116/220 (52%), Gaps = 5/220 (2%)

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           D+  L YLDL  N+++ +  ++ RL +L  LD   N L+SLP  I SL +L++L ++TN 
Sbjct: 1   DITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNT 60

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP  +G+   L  L ++ N+L  LP ++  +  L++L    N + +LP     L +L
Sbjct: 61  LTELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNL 120

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +L V  N+L  +   +C    L  + + NN   L  LP  +  L+ L EL I  NQ R 
Sbjct: 121 TKLYVGGNKLTELSSGVCSLQHLETVVVSNN--KLSTLPEGVERLKNLTELYIDGNQFRE 178

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPP---RNIVEMGAQAVV 376
           LP     LS L VL V  NP+   P   +N++ + +  ++
Sbjct: 179 LPLGVCSLSNLEVLVVGPNPIRFLPDEIKNLIRLKSLTII 218


>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
          Length = 602

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/308 (31%), Positives = 174/308 (56%), Gaps = 6/308 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ +  L +L+KL++  N++   P+ I +L 
Sbjct: 92  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAMRELENLQKLNVSHNKLKIFPEEITNLR 151

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +     +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKS 211

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +   L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S S L+EL
Sbjct: 212 LPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCSLLKEL 270

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L    +++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 271 HVGENQIEMLEAEHLKHLNSILVLDLRDN--KLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVE 401
            S   L  L+ L ++ NPL    R I+  G Q V++Y+   + K D  +Q     ++ + 
Sbjct: 329 YSLGNL-HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI-KDDGPSQSESAAETAMT 386

Query: 402 MCFFSRSN 409
           +   SR N
Sbjct: 387 LPSESRVN 394



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 147/328 (44%), Gaps = 49/328 (14%)

Query: 103 DNIEWL-PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           + IE L  + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G+L
Sbjct: 275 NQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 162 LSLVYLDLRGNQI--------------------------------SALPVALS------- 182
             L +L L GN +                                SA   A++       
Sbjct: 335 -HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDDGPSQSESAAETAMTLPSESRV 393

Query: 183 ---RLVRLEELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RE 235
               ++ L+ LD      + +PD + + +    +  +    N L E+P  + +   +  +
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           + + +N+L  +   +  +  L  L +R N +  LP  M SL  L+ +++SFN  + +PE 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           L    TL  + I NN       P+ +  +E L  LD+ NN +  +P        LR L +
Sbjct: 514 LYRIFTLETILISNNQVG-SVDPQKMKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLL 572

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLV 383
             NP  VP   I+  G  A+++Y+ D +
Sbjct: 573 DGNPFRVPRAAILIKGTAAILEYLRDRI 600


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|61557121|ref|NP_001013173.1| leucine-rich repeat protein SHOC-2 [Rattus norvegicus]
 gi|81910889|sp|Q6AYI5.1|SHOC2_RAT RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|50925627|gb|AAH79032.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Rattus
           norvegicus]
 gi|149040408|gb|EDL94446.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_a
           [Rattus norvegicus]
          Length = 582

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 142/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   +  L RL  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557


>gi|351711953|gb|EHB14872.1| Protein LAP2 [Heterocephalus glaber]
          Length = 1405

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 154/258 (59%), Gaps = 2/258 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I +  +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G   ++  L++D N+L  LP+++G + ++E L   +N I+ LP+++  L+++R    
Sbjct: 270 ETVGSLKNVTTLKIDENQLMYLPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPGEIGNWKNVTVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQENPLEV 362
             L +L  + + +N + +
Sbjct: 388 TKLQQLTAMWLSDNQVSI 405



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 104/333 (31%), Positives = 161/333 (48%), Gaps = 28/333 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           N+I  LP S   L+ +R      N L+  P  I
Sbjct: 309 NEIEALPSSVGQLTNIRTFAADHNYLQQLPGEI 341



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 151/277 (54%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE VG +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T +      +N+  L+ LP  IGN + +  L + +N++  LP+  
Sbjct: 307 SFNEIEALPSSVGQLTNIRTFAADHNY--LQQLPGEIGNWKNVTVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P +  ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSD 400



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP+++GSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETVGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP +VG++  +   +  +N ++QLP  + +  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEIEALPSSVGQLTNIRTFAADHNYLQQLPGEIGNWKNVTVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ+ +L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQVSIL 406



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|116007092|ref|NP_001014670.2| scribbled, isoform H [Drosophila melanogaster]
 gi|113194844|gb|AAX52995.2| scribbled, isoform H [Drosophila melanogaster]
          Length = 1939

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I    +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L +  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
              +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 GCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NELEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L +  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNELE++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNELEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N L+ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 151/254 (59%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I    +L+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG   ++  L++D N+L  LP+++G + ++E L   +N ++ LP+++  L+++R    
Sbjct: 270 ETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L+ +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP SF
Sbjct: 330 DHNYLQQLPPEIGSWKNITVLFLHSN--KLETLPEEMGDMQKLKVINLSDNRLKNLPFSF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 102/331 (30%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N + A+PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L +  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
              +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 GCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDEN--QLMYLPDSIGGLVSIEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ +R      N L ++PP
Sbjct: 309 NELEALPSSIGQLTNIRTFAADHNYLQQLPP 339



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 159/295 (53%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IGSL  L  L +  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMYLPDSIGGLVSIEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNELE++P S+   T +      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNELEALPSSIGQLTNIRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  127 bits (320), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  +  NR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N L+ALP ++G++  +   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTAL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|260826181|ref|XP_002608044.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
 gi|229293394|gb|EEN64054.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
          Length = 997

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/305 (30%), Positives = 153/305 (50%), Gaps = 27/305 (8%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N    P+ I  L+S+  LDLS N++ +VP  I  L  L+K  L  N I  LP  I +L 
Sbjct: 83  NNFASFPEQILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQVLPQGICELF 142

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL------------------------- 197
            L  LD+  N ++ LPV   +L RL  LDL  N +                         
Sbjct: 143 LLEELDISYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFELRELVEFDFSHNTAIS 202

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
             LP ++  L +L+ L + +N L  LP+ I     L EL +D N+L  LP     +  ++
Sbjct: 203 GPLPCNVAFLTNLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVK 262

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL++ +N  +  P  + +L+ + EL +S N+L  +PE +     L  + + +N  ++ ++
Sbjct: 263 VLNLGFNCYEIFPHAVLALNRVEELFLSRNKLSHIPEEIGLLEHLRVLWLDHN--NVESI 320

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P SI  L  +EEL +  N+++ LP+ F  LS L  L V+ENPL  PP ++ + G +A+  
Sbjct: 321 PDSITKLVNMEELSVQGNRLKCLPEGFGKLSNLDCLDVRENPLLQPPLDVCKNGVKAIAA 380

Query: 378 YMADL 382
           +  +L
Sbjct: 381 FQEEL 385



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/252 (29%), Positives = 118/252 (46%), Gaps = 24/252 (9%)

Query: 143 KLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR-LVRLEELDLGSNNLSSLP 201
           +L L    +  +P  +  L  L  LDL GN +  LP   S  L  L  LDL  NN +S P
Sbjct: 30  QLSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHYLTNLGVLDLKKNNFASFP 89

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
           + I  L S+ +L +  N L+ +P  I Q   L++  +  N ++ LP+ + ++  LE L +
Sbjct: 90  EQILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQVLPQGICELFLLEELDI 149

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA--------- 312
            YN +  LP     L  LR LD+  N++  +P+ +     LV+ +  +N A         
Sbjct: 150 SYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFELRELVEFDFSHNTAISGPLPCNV 209

Query: 313 --------------DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
                          L  LP  I +L +LEEL + NN++  LP  F  L R++VL +  N
Sbjct: 210 AFLTNLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFN 269

Query: 359 PLEVPPRNIVEM 370
             E+ P  ++ +
Sbjct: 270 CYEIFPHAVLAL 281



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/216 (31%), Positives = 116/216 (53%), Gaps = 5/216 (2%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA--VPATIGGLSSL 141
           ++    K  R L+L +   + I ++P  + +L  LV  D S N  ++  +P  +  L++L
Sbjct: 159 VKFGQLKRLRTLDLDH---NKIPYIPQQVFELRELVEFDFSHNTAISGPLPCNVAFLTNL 215

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           + L L +N +  LP+ I DL+ L  L L  N++  LP     L R++ L+LG N     P
Sbjct: 216 QVLWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEIFP 275

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSV 261
            ++ +L  +++L +  N L  +P  IG    LR L +D+N ++++P+++ K+  +E LSV
Sbjct: 276 HAVLALNRVEELFLSRNKLSHIPEEIGLLEHLRVLWLDHNNVESIPDSITKLVNMEELSV 335

Query: 262 RYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLC 297
           + N +K LP     LS+L  LDV  N L   P  +C
Sbjct: 336 QGNRLKCLPEGFGKLSNLDCLDVRENPLLQPPLDVC 371


>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
 gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
          Length = 976

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/270 (37%), Positives = 146/270 (54%), Gaps = 4/270 (1%)

Query: 93  RDLNLQN-KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANR 150
           R LNL+   L DN I+ LP  +     LV LD+S N I  +P +I    SL+  D   N 
Sbjct: 57  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNP 116

Query: 151 IIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISL 210
           +  LPD    L SL +L L    + +LP  +  L  L  L+L  N L S+P S+  L+ L
Sbjct: 117 LSRLPDGFTQLRSLAHLALNDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKL 176

Query: 211 KKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLP 270
           ++L + +NDL+ LP T+G   +LREL +D N+L +LP  +G +  L  L V  N ++QLP
Sbjct: 177 EQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLP 236

Query: 271 TTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEEL 330
             +S L SL +L +S N+L S+P SL     L  + +  N   L  L  SIG+ E L E+
Sbjct: 237 AEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNR--LTQLTESIGDCENLSEI 294

Query: 331 DISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            ++ N + VLP S   L++L  L V  N L
Sbjct: 295 ILTENLLTVLPKSMGNLTKLTNLNVDRNRL 324



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/255 (36%), Positives = 145/255 (56%), Gaps = 3/255 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           +++ LP  IG LS+LV+L+L EN + +VP ++  L  L++LDL +N +  LPD++G L +
Sbjct: 139 SLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPN 198

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L  NQ+S+LP  L  L RL  LD+  N L  LP  I  L+SL  L++  N L  L
Sbjct: 199 LRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSL 258

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P ++GQ   L  L+VD NRL  L E++G    L  + +  N +  LP +M +L+ L  L+
Sbjct: 259 PSSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLN 318

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
           V  N L S+P  +    +L  +++ +N   L ALP  +     L  LD++ N++  LP +
Sbjct: 319 VDRNRLLSLPSEIGGCASLNVLSLRDN--QLSALPPELAGATELHVLDVAGNRLLNLPFA 376

Query: 344 FRMLSRLRVLRVQEN 358
              L+ L+ L + EN
Sbjct: 377 LTNLN-LKALWLAEN 390



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/194 (37%), Positives = 117/194 (60%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LPD++G L +L  L L  N++ ++P+ +G L  L  LD+  N++ +LP  I  L+
Sbjct: 184 NDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLM 243

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L L  NQ+S+LP +L +L +L  L +  N L+ L +SIG   +L ++I+  N L  
Sbjct: 244 SLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTV 303

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP ++G  + L  L VD NRL +LP  +G   +L VLS+R N +  LP  ++  + L  L
Sbjct: 304 LPKSMGNLTKLTNLNVDRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELAGATELHVL 363

Query: 283 DVSFNELESVPESL 296
           DV+ N L ++P +L
Sbjct: 364 DVAGNRLLNLPFAL 377



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 133/260 (51%), Gaps = 2/260 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP    +L +L  L LS+N I  +P  +     L +LD+  N I E+P+SI    SL   
Sbjct: 51  LPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIA 110

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D  GN +S LP   ++L  L  L L   +L SLP  IG+L +L  L +  N L+ +P ++
Sbjct: 111 DFSGNPLSRLPDGFTQLRSLAHLALNDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSL 170

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
                L +L +  N L+ LP+ +G +  L  L +  N +  LP+ + +L  L  LDVS N
Sbjct: 171 SFLVKLEQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSEN 230

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +LE +P  +    +L  + +  N   L +LP S+G L+ L  L +  N++  L +S    
Sbjct: 231 KLEQLPAEISGLMSLTDLLLSQN--QLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDC 288

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             L  + + EN L V P+++
Sbjct: 289 ENLSEIILTENLLTVLPKSM 308



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 83/252 (32%), Positives = 133/252 (52%), Gaps = 3/252 (1%)

Query: 120 SLDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           S+D     + AVP  I   S SL++L L AN++ ELP     LL+L  L L  N+I  LP
Sbjct: 16  SVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLP 75

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             ++  ++L ELD+  N++  +P+SI    SL+      N L  LP    Q  SL  L +
Sbjct: 76  PEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLAL 135

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           +   L++LP  +G +  L  L +R N +K +P ++S L  L +LD+  N+L+ +P++L  
Sbjct: 136 NDVSLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGA 195

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L ++ +  N   L +LP  +GNL  L  LD+S N++  LP     L  L  L + +N
Sbjct: 196 LPNLRELWLDRN--QLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQN 253

Query: 359 PLEVPPRNIVEM 370
            L   P ++ ++
Sbjct: 254 QLSSLPSSLGQL 265



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/152 (35%), Positives = 83/152 (54%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP  I  L SL  L LS+N++ ++P+++G L  L  L +  NR+ +L +SIGD  
Sbjct: 230 NKLEQLPAEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLSILKVDQNRLTQLTESIGDCE 289

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  + L  N ++ LP ++  L +L  L++  N L SLP  IG   SL  L +  N L  
Sbjct: 290 NLSEIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLSLPSEIGGCASLNVLSLRDNQLSA 349

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIH 254
           LP  +   + L  L V  NRL  LP A+  ++
Sbjct: 350 LPPELAGATELHVLDVAGNRLLNLPFALTNLN 381



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 69/121 (57%), Gaps = 5/121 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L      L +SIG   +L  + L+EN +  +P ++G L+ L  L++  NR++ LP  
Sbjct: 275 QNRLTQ----LTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLSLPSE 330

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL  L LR NQ+SALP  L+    L  LD+  N L +LP ++ +L +LK L +  
Sbjct: 331 IGGCASLNVLSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPFALTNL-NLKALWLAE 389

Query: 218 N 218
           N
Sbjct: 390 N 390



 Score = 43.9 bits (102), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +E +  R+ +++ +P  +   S SL EL +  N+L  +P+       L K+ + +N  ++
Sbjct: 14  VESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + LP  + N   L ELDIS N I  +P+S +    L +     NPL   P    ++
Sbjct: 72  QRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQL 127


>gi|351706806|gb|EHB09725.1| Leucine-rich repeat protein SHOC-2 [Heterocephalus glaber]
          Length = 571

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 160/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 214 NKIKQLPAEIGDLCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 273

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S + SL+ L  L +  N  +
Sbjct: 274 SLSRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 333

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 334 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 391

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 392 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 449

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 450 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 482



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 237 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCS 296

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 297 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 356

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 357 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 416

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 417 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 476

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 477 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 534

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 535 MSIENCPLSHLPAQIVAGGPSFIIQFL 561



 Score =  115 bits (287), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 122 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYGLD 181

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 182 SLTTLYLRFNRITTVEKDIKNLSKLSMLSIRENKIKQLPAEIGDLCNLITLDVAHNQLEH 241

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 242 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLSRLGLRYNRLSAIPRSLAKCSALEEL 301

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 302 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 358

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 359 IP--FGIFSRAKVL 370



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 349 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 406

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 407 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 466

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 467 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 526

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 527 ALCSKLSIMSIENCPLSHLP 546



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 103/206 (50%), Gaps = 13/206 (6%)

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LDL    I  LP ++             N L SLP  +G L++L  L +  N L  LP +
Sbjct: 105 LDLSKRSIHILPSSIK-----------XNKLQSLPAEVGCLVNLMTLALSENSLTSLPDS 153

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           +     LR L + +N+L+ +P  V  + +L  L +R+N I  +   + +LS L  L +  
Sbjct: 154 LDNLKKLRMLDLRHNKLREIPSVVYGLDSLTTLYLRFNRITTVEKDIKNLSKLSMLSIRE 213

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRM 346
           N+++ +P  +     L+ +++ +N   L  LP+ IGN   +  LD+ +N++  LPD+   
Sbjct: 214 NKIKQLPAEIGDLCNLITLDVAHN--QLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGN 271

Query: 347 LSRLRVLRVQENPLEVPPRNIVEMGA 372
           LS L  L ++ N L   PR++ +  A
Sbjct: 272 LSSLSRLGLRYNRLSAIPRSLAKCSA 297


>gi|116497081|gb|AAI26465.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 133/238 (55%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IG L ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGLLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|312378183|gb|EFR24825.1| hypothetical protein AND_10342 [Anopheles darlingi]
          Length = 614

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 158/350 (45%), Gaps = 75/350 (21%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP +IG L +L +LDLS N +  +P  IG   +L  LDL  N ++++P++IG+L 
Sbjct: 258 NKIHELPAAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPETIGNLS 317

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS------------- 209
           +L+ L LR NQ++++P  L     ++E ++  N +S LPD + + +S             
Sbjct: 318 NLMRLGLRYNQLTSIPATLRNCTHMDEFNVEGNGISQLPDGLLASLSNLTTITLSRNAFH 377

Query: 210 ------------------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  LP  IG  + +
Sbjct: 378 SYPSGGPAQFTNVTSINLEHNQIDKIQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 437

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL    N L  LP+ +  +  LE+L +  N +K++P T+ +L  LR LD+  N LES+P
Sbjct: 438 VELNFGTNSLTKLPDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLP 497

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             +     L K+ + +N   L +LPR+IG+L  L  L +  N ++ LP+    L  L  L
Sbjct: 498 SEIGLLHDLQKLILQSN--QLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESL 555

Query: 354 RVQEN------------------------PLEVPPRNIVEMGAQAVVQYM 379
            + +N                        PL   P  +V  G   V+QY+
Sbjct: 556 YINDNASLIKLPYELALCQNLAIMSIENCPLSALPPEVVSGGPSLVIQYL 605



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/331 (29%), Positives = 149/331 (45%), Gaps = 51/331 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L++L +L L+EN + ++P ++  L  LK LDL  N++ E+PD I  L 
Sbjct: 166 NKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLRHLKVLDLRHNKLSEIPDVIYKLH 225

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L LR N+I  +   L  L  L  L L  N +  LP +IG L++L  L +  N L+ 
Sbjct: 226 TLTTLYLRFNRIRIVGDNLKNLSNLTMLSLRENKIHELPAAIGHLVNLTTLDLSHNHLKH 285

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +PE +G +  L  L +RYN +  +P T+ + + + E 
Sbjct: 286 LPKAIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGLRYNQLTSIPATLRNCTHMDEF 345

Query: 283 DVSFNELESVPESLCFA-------------------------TTLVKMNIGNNFAD---- 313
           +V  N +  +P+ L  +                         T +  +N+ +N  D    
Sbjct: 346 NVEGNGISQLPDGLLASLSNLTTITLSRNAFHSYPSGGPAQFTNVTSINLEHNQIDKIQY 405

Query: 314 ------------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
                             L +LP  IG    + EL+   N +  LPD    L  L +L +
Sbjct: 406 GIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKLPDDIHCLQNLEILIL 465

Query: 356 QENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
             N L+  P  I  +    V+    DL E R
Sbjct: 466 SNNLLKRIPNTIGNLKKLRVL----DLEENR 492



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 154/300 (51%), Gaps = 9/300 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  +P S+   +SLV   L  N+I ++P  IG L++LK L L+ N +  LPDS+ +L  L
Sbjct: 145 ITVIPSSVKDCTSLVEFYLYGNKISSLPPEIGCLANLKTLALNENSLTSLPDSLQNLRHL 204

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N++S +P  + +L  L  L L  N +  + D++ +L +L  L +  N + ELP
Sbjct: 205 KVLDLRHNKLSEIPDVIYKLHTLTTLYLRFNRIRIVGDNLKNLSNLTMLSLRENKIHELP 264

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG   +L  L + +N LK LP+A+G    L  L +++N++  +P T+ +LS+L  L +
Sbjct: 265 AAIGHLVNLTTLDLSHNHLKHLPKAIGNCVNLTALDLQHNDLLDIPETIGNLSNLMRLGL 324

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLPDS 343
            +N+L S+P +L   T + + N+  N   +  LP   + +L  L  + +S N     P  
Sbjct: 325 RYNQLTSIPATLRNCTHMDEFNVEGN--GISQLPDGLLASLSNLTTITLSRNAFHSYPSG 382

Query: 344 F-RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEM 402
                + +  + ++ N ++      ++ G  +  + +  L  K +A T       +W +M
Sbjct: 383 GPAQFTNVTSINLEHNQIDK-----IQYGIFSRAKGLTKLNMKENALTSLPLDIGTWTQM 437



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I++      +   L  L++ EN + ++P  IG  + + +L+   N + +L
Sbjct: 393 INLEHNQIDKIQY--GIFSRAKGLTKLNMKENALTSLPLDIGTWTQMVELNFGTNSLTKL 450

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I  L +L  L L  N +  +P  +  L +L  LDL  N L SLP  IG L  L+KLI
Sbjct: 451 PDDIHCLQNLEILILSNNLLKRIPNTIGNLKKLRVLDLEENRLESLPSEIGLLHDLQKLI 510

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +++N L  LP TIG  ++L  L V  N L+ LPE +G +  LE L +  N ++ +LP  +
Sbjct: 511 LQSNQLNSLPRTIGHLTNLTYLSVGENNLQFLPEEIGTLENLESLYINDNASLIKLPYEL 570

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L  + +    L ++P
Sbjct: 571 ALCQNLAIMSIENCPLSALP 590


>gi|195504035|ref|XP_002098907.1| GE23676 [Drosophila yakuba]
 gi|194185008|gb|EDW98619.1| GE23676 [Drosophila yakuba]
          Length = 1857

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLSNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLSNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416


>gi|195036246|ref|XP_001989582.1| GH18723 [Drosophila grimshawi]
 gi|193893778|gb|EDV92644.1| GH18723 [Drosophila grimshawi]
          Length = 1864

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    +++LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTSLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  M  L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMGGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN + ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLETLPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCDNMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGRMTKLSNLNVDRNALEYLPLEI 332



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 81/197 (41%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ +G
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEMG 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N +  LP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IG+ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/271 (33%), Positives = 141/271 (52%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  + ++PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTSLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + +G   SL +L +  N L+ LP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEMGGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCDNMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGRMTKLSNLNVDRNA--LEYLPLEIGQCSNLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/236 (35%), Positives = 132/236 (55%), Gaps = 3/236 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +  LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEMGGLVSLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   S+L  L +
Sbjct: 284 DTLGNCDNMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCSNLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
             N+L+ +P  L   T L  +++  N   L  LP S+ NL+ L+ + +S NQ + L
Sbjct: 344 RDNKLKKLPPELGNCTVLHVLDVSGN--QLLYLPYSLVNLQ-LKAVWLSENQSQPL 396



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 87/259 (33%), Positives = 126/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L+SLP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTSLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  +G L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEMGGLVSLTDLDLAQNLLETLPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|386766579|ref|NP_001247322.1| scribbled, isoform R [Drosophila melanogaster]
 gi|383292971|gb|AFH06639.1| scribbled, isoform R [Drosophila melanogaster]
          Length = 1951

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|194907948|ref|XP_001981667.1| GG11485 [Drosophila erecta]
 gi|190656305|gb|EDV53537.1| GG11485 [Drosophila erecta]
          Length = 1855

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLSNLNVDRNALEYLPLEI 332



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 98/300 (32%), Positives = 147/300 (49%), Gaps = 26/300 (8%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFAD---------------------LRALPRSIGN 323
           + N L  +P S+   T L  +N+  N  +                     L+ LP  +GN
Sbjct: 298 TENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGN 357

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             +L  LD+S NQ+  LP S   L +L+ + + EN     L   P   VE G Q +  Y+
Sbjct: 358 CTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPLLTFQPDTDVETGEQVLSCYL 416



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 137/268 (51%), Gaps = 2/268 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L +  N L+ 
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKH 166

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP TI Q + L+ L +  N ++ LP  +G +  L  L + +N +++LP  +  L+ L  L
Sbjct: 167 LPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYL 226

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           DVS N LE +P  +    +L  +++  N   L ALP  I  L  L  L +  N+++ L D
Sbjct: 227 DVSENRLEELPNEISGLVSLTDLDLAQNL--LEALPDGIAKLSRLTILKLDQNRLQRLND 284

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +      ++ L + EN L   P +I +M
Sbjct: 285 TLGNCENMQELILTENFLSELPASIGQM 312


>gi|153876005|ref|ZP_02003544.1| conserved hypothetical protein [Beggiatoa sp. PS]
 gi|152067531|gb|EDN66456.1| conserved hypothetical protein [Beggiatoa sp. PS]
          Length = 307

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/275 (34%), Positives = 150/275 (54%), Gaps = 8/275 (2%)

Query: 102 MDNIEW----LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           +D  EW    LP  I +L  L SL L  N++  +P  I  LS LK+LD++ N+++ LP  
Sbjct: 20  LDLSEWGLTELPLEIFQLFQLESLSLEGNQLTDIPPEIIYLSQLKQLDINNNQLVILPAE 79

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG L  L  L+   NQ+  LP  + +L +L+ ++  SN L +LP +I  L++L++L +  
Sbjct: 80  IGQLSQLERLNADENQLVMLPSDIGKLTKLKTVNFSSNQLIALPSTISHLVNLEELDLSY 139

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSL- 276
           N    L   I Q S LR+L +  N+L  +   + ++  L  L++  N +  LP T+S L 
Sbjct: 140 NKFISLQPEIAQLSQLRKLDLSGNQLTDISSVISQMTQLTKLNLSDNRLTDLPATLSQLA 199

Query: 277 SSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQ 336
           +SL+++D+S N+   +P  +     L ++ I  N   +  LP  IG L  LE LD+ NN 
Sbjct: 200 ASLKDIDLSINDFGEIPSVIFQLFKLKELCISENH--IEDLPSKIGKLCALEWLDVRNNL 257

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           +  LP S   L  L  L ++ NPL + PR I+EMG
Sbjct: 258 LTNLPASISQLIHLEWLLLEGNPLPI-PRKILEMG 291



 Score = 40.0 bits (92), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 308 GNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           GN   D+   P  I  L  L++LDI+NNQ+ +LP     LS+L  L   EN L + P +I
Sbjct: 47  GNQLTDI---PPEIIYLSQLKQLDINNNQLVILPAEIGQLSQLERLNADENQLVMLPSDI 103

Query: 368 VEMGAQAVVQYMAD 381
            ++     V + ++
Sbjct: 104 GKLTKLKTVNFSSN 117


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|241779562|ref|XP_002399930.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215510641|gb|EEC20094.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 429

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/287 (33%), Positives = 146/287 (50%), Gaps = 5/287 (1%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
            G R LNL +   ++I+ LP ++  L  L  LD+S+N ++ +P  I G   L  ++   N
Sbjct: 68  HGLRKLNLSD---NDIQTLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVN 124

Query: 150 RIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS 209
            + +LP+    L+++  L L    +  LP    RL +L+ L+L  N+L  LP S+  L  
Sbjct: 125 PVGKLPEGFTQLINIEQLYLNDTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTE 184

Query: 210 LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           L +L +  ND  EL   +    SL EL  D NRL ALP  +G +  L  L    N I  +
Sbjct: 185 LVRLDIGQNDFAELATVLESLPSLTELWCDNNRLTALPSYLGNLVKLTYLDASRNRISYV 244

Query: 270 PTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEE 329
              +  L+ L +L ++ N+L+ VPE+L    +L  + + +N   L  LP SIG L  LEE
Sbjct: 245 AEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNH--LATLPDSIGQLCKLEE 302

Query: 330 LDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVV 376
           L I+ N+I  LP +  +L  L +L   +N LE  P  I   G   V+
Sbjct: 303 LIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRVL 349



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 137/254 (53%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+LS L  L+L EN +  +P ++  L+ L +LD+  N   EL   +  L SL
Sbjct: 149 LEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELVRLDIGQNDFAELATVLESLPSL 208

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L    N+++ALP  L  LV+L  LD   N +S + + I  L  L  L +  N L+++P
Sbjct: 209 TELWCDNNRLTALPSYLGNLVKLTYLDASRNRISYVAEEIEHLAVLSDLTLTANKLQKVP 268

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G   SL  LR+D N L  LP+++G++  LE L +  N I  LP+T+  L SL  L  
Sbjct: 269 ETLGCLQSLTTLRLDDNHLATLPDSIGQLCKLEELIINGNEIDSLPSTVGLLRSLSILIA 328

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LE +P  +     L  +++ +N   L  +P  +G+L  L  +++S NQ+R LP S 
Sbjct: 329 DDNLLEDLPPEIGSCGKLRVLSLRDN--RLCNVPDELGHLGALRVVNLSGNQLRHLPVSL 386

Query: 345 RMLSRLRVLRVQEN 358
             L  L  L + +N
Sbjct: 387 AKLGGLHALWLSQN 400



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 128/238 (53%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++++ LP S+ +L+ LV LD+ +N    +   +  L SL +L    NR+  LP  +G+L+
Sbjct: 170 NHLKVLPKSMARLTELVRLDIGQNDFAELATVLESLPSLTELWCDNNRLTALPSYLGNLV 229

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD   N+IS +   +  L  L +L L +N L  +P+++G L SL  L ++ N L  
Sbjct: 230 KLTYLDASRNRISYVAEEIEHLAVLSDLTLTANKLQKVPETLGCLQSLTTLRLDDNHLAT 289

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IGQ   L EL ++ N + +LP  VG + +L +L    N ++ LP  + S   LR L
Sbjct: 290 LPDSIGQLCKLEELIINGNEIDSLPSTVGLLRSLSILIADDNLLEDLPPEIGSCGKLRVL 349

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N L +VP+ L     L  +N+  N   LR LP S+  L  L  L +S NQ + L
Sbjct: 350 SLRDNRLCNVPDELGHLGALRVVNLSGN--QLRHLPVSLAKLGGLHALWLSQNQTKPL 405



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/251 (33%), Positives = 133/251 (52%), Gaps = 9/251 (3%)

Query: 121 LDLSENRIVAVPATIGGLS-SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPV 179
           LD +   +  VP+ +     +L++L L+AN+I +LP  +     L  L+L  N I  LP 
Sbjct: 26  LDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLRKLNLSDNDIQTLPP 85

Query: 180 ALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVD 239
           ALS LV LEELD+  NN+  +PD+I     L  +    N + +LP    Q  ++ +L ++
Sbjct: 86  ALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVGKLPEGFTQLINIEQLYLN 145

Query: 240 YNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS---FNELESVPESL 296
              L+ LP   G++  L++L +R N++K LP +M+ L+ L  LD+    F EL +V ESL
Sbjct: 146 DTFLEYLPANFGRLSKLKILELRENHLKVLPKSMARLTELVRLDIGQNDFAELATVLESL 205

Query: 297 CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
               +L ++   NN   L ALP  +GNL  L  LD S N+I  + +    L+ L  L + 
Sbjct: 206 ---PSLTELWCDNN--RLTALPSYLGNLVKLTYLDASRNRISYVAEEIEHLAVLSDLTLT 260

Query: 357 ENPLEVPPRNI 367
            N L+  P  +
Sbjct: 261 ANKLQKVPETL 271



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 10/157 (6%)

Query: 229 QCSSLR----ELRV-DYNR--LKALP-EAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            C  LR    E+RV DY    L+ +P E      TLE L +  N IK LP  +     LR
Sbjct: 12  HCPCLRPAREEVRVLDYAHCGLEEVPSEVFNYERTLEELYLNANQIKDLPRPLFHCHGLR 71

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           +L++S N+++++P +L     L +++I  N  ++  +P +I   + L  ++ S N +  L
Sbjct: 72  KLNLSDNDIQTLPPALSSLVGLEELDISKN--NVIEIPDNIKGCKCLSIVEASVNPVGKL 129

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQ 377
           P+ F  L  +  L + +  LE  P N   +    +++
Sbjct: 130 PEGFTQLINIEQLYLNDTFLEYLPANFGRLSKLKILE 166



 Score = 42.7 bits (99), Expect = 0.30,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 42/82 (51%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E LP  IG    L  L L +NR+  VP  +G L +L+ ++L  N++  LP S+  L  L
Sbjct: 333 LEDLPPEIGSCGKLRVLSLRDNRLCNVPDELGHLGALRVVNLSGNQLRHLPVSLAKLGGL 392

Query: 165 VYLDLRGNQISALPVALSRLVR 186
             L L  NQ   L +  S L R
Sbjct: 393 HALWLSQNQTKPLVLLQSDLDR 414



 Score = 38.5 bits (88), Expect = 5.8,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 3/121 (2%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            +  P    +   +R LD +   LE VP E   +  TL ++ +  N   ++ LPR + + 
Sbjct: 10  FRHCPCLRPAREEVRVLDYAHCGLEEVPSEVFNYERTLEELYLNAN--QIKDLPRPLFHC 67

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVE 384
             L +L++S+N I+ LP +   L  L  L + +N +   P NI      ++V+   + V 
Sbjct: 68  HGLRKLNLSDNDIQTLPPALSSLVGLEELDISKNNVIEIPDNIKGCKCLSIVEASVNPVG 127

Query: 385 K 385
           K
Sbjct: 128 K 128


>gi|440797010|gb|ELR18105.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 950

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/287 (33%), Positives = 151/287 (52%), Gaps = 25/287 (8%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +LP ++G L  L +L L  N +  +P  + GLS L +L+L  N + ELP  +G +  L +
Sbjct: 317 FLPPALGTLPRLTNLFLGANLLTLLPTELCGLSQLAELELQDNALEELPAELGQMEKLAH 376

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETN---DLEE- 222
           LD+R NQ++ALP ++ +LV+L  LD G N +S LP  + ++ SL +L +  N   DL E 
Sbjct: 377 LDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPED 436

Query: 223 -------------------LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
                              LP  + Q + L  L +  NRL  LP  V  +  L+ L V  
Sbjct: 437 FCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAA 496

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N + +LPT +  L++L  LD++ N L ++PE L     L ++   +N   L ++P S+GN
Sbjct: 497 NGLTELPTEVGRLTTLEILDLTSNHLTALPEELGCCVRLTELEASHN--RLASVPASLGN 554

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L  L E+D+S N++  LP     L+ LR L++    L+  PR +  +
Sbjct: 555 LVSLVEIDLSANELTTLPPELARLTALRHLKLCHCRLQRLPRELAAL 601



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/265 (35%), Positives = 151/265 (56%), Gaps = 4/265 (1%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
           ++ ++ LP+ +G  + LV LD++ N + A+PA +  LSSL++L++ +NR++ L   +GDL
Sbjct: 150 VNQLQRLPEELGLCADLVELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDL 209

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
             L  LDLR N++  LP  L RL +L  L L  N+L+SLP ++ +L +LK L +  N L 
Sbjct: 210 PDLERLDLRFNRLLRLPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLA 269

Query: 222 ELPHTIGQCSSLRELRVDYNRLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLR 280
            LP       +L EL +  NRL AL PE +  +  L+ L + +N +  LP  + +L  L 
Sbjct: 270 HLPPDALALPALAELSLRANRLTALPPEPLAALTALQTLDLAHNLLPFLPPALGTLPRLT 329

Query: 281 ELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            L +  N L  +P  LC  + L ++ + +N   L  LP  +G +E L  LD+ NNQ+  L
Sbjct: 330 NLFLGANLLTLLPTELCGLSQLAELELQDNA--LEELPAELGQMEKLAHLDVRNNQLTAL 387

Query: 341 PDSFRMLSRLRVLRVQENPL-EVPP 364
           P S   L +LR+L    N + ++PP
Sbjct: 388 PPSIGQLVKLRLLDAGMNLISDLPP 412



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 135/259 (52%), Gaps = 2/259 (0%)

Query: 109 PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLD 168
           P+ +  L++L +LDL+ N +  +P  +G L  L  L L AN +  LP  +  L  L  L+
Sbjct: 296 PEPLAALTALQTLDLAHNLLPFLPPALGTLPRLTNLFLGANLLTLLPTELCGLSQLAELE 355

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           L+ N +  LP  L ++ +L  LD+ +N L++LP SIG L+ L+ L    N + +LP  + 
Sbjct: 356 LQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPELY 415

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
             SSL  L +  NR+  LPE   ++  LE L + YN +  LP  ++ L+ L  L +S N 
Sbjct: 416 AVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGNR 475

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           L ++P  +   T L ++ +  N   L  LP  +G L  LE LD+++N +  LP+      
Sbjct: 476 LTTLPPVVFDLTWLKELYVAAN--GLTELPTEVGRLTTLEILDLTSNHLTALPEELGCCV 533

Query: 349 RLRVLRVQENPLEVPPRNI 367
           RL  L    N L   P ++
Sbjct: 534 RLTELEASHNRLASVPASL 552



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 116/245 (47%), Gaps = 47/245 (19%)

Query: 100 KLMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL-------------------- 138
           +L DN +E LP  +G++  L  LD+  N++ A+P +IG L                    
Sbjct: 355 ELQDNALEELPAELGQMEKLAHLDVRNNQLTALPPSIGQLVKLRLLDAGMNLISDLPPEL 414

Query: 139 ---SSLKKLDLHANRIIELPD-----------------------SIGDLLSLVYLDLRGN 172
              SSL +L L  NRI +LP+                        +  L  L  L L GN
Sbjct: 415 YAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTLPAGLNQLTHLTVLSLSGN 474

Query: 173 QISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSS 232
           +++ LP  +  L  L+EL + +N L+ LP  +G L +L+ L + +N L  LP  +G C  
Sbjct: 475 RLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEILDLTSNHLTALPEELGCCVR 534

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           L EL   +NRL ++P ++G + +L  + +  N +  LP  ++ L++LR L +    L+ +
Sbjct: 535 LTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPPELARLTALRHLKLCHCRLQRL 594

Query: 293 PESLC 297
           P  L 
Sbjct: 595 PRELA 599



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 91/151 (60%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  + +L+ L  L LS NR+  +P  +  L+ LK+L + AN + ELP  +G L 
Sbjct: 451 NQLSTLPAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLT 510

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  LDL  N ++ALP  L   VRL EL+   N L+S+P S+G+L+SL ++ +  N+L  
Sbjct: 511 TLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTT 570

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
           LP  + + ++LR L++ + RL+ LP  +  +
Sbjct: 571 LPPELARLTALRHLKLCHCRLQRLPRELAAL 601



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 91/326 (27%), Positives = 141/326 (43%), Gaps = 50/326 (15%)

Query: 93  RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII 152
           + L   N   +  + LP +I KL+ L  L L +N +  +P  I  L +L KL++  N ++
Sbjct: 48  KSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNALV 107

Query: 153 ELPDSIGDLLSLV-YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
            LP+ + + + L+  L    NQ+  LP  +     L+ L    N L  LP+ +G    L 
Sbjct: 108 ALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCADLV 167

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           +L V TN L  LP  +   SSLR L V  NRL  L   +G +  LE L +R+N + +LP 
Sbjct: 168 ELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDLRFNRLLRLPD 227

Query: 272 TMSSLSSLRELDVSFNELESV--------------------------------------- 292
            +  L+ L  L +  N+L S+                                       
Sbjct: 228 ELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRLAHLPPDALALPALAELSLR 287

Query: 293 --------PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
                   PE L   T L  +++ +N   L  LP ++G L  L  L +  N + +LP   
Sbjct: 288 ANRLTALPPEPLAALTALQTLDLAHNL--LPFLPPALGTLPRLTNLFLGANLLTLLPTEL 345

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             LS+L  L +Q+N LE  P  + +M
Sbjct: 346 CGLSQLAELELQDNALEELPAELGQM 371



 Score = 88.2 bits (217), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 117/224 (52%), Gaps = 3/224 (1%)

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L SL  L+ + NR   LP +I  L  L  L L  N ++ LPV +  L  L +L++G+N L
Sbjct: 47  LKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTMLPVEICHLRNLTKLEVGNNAL 106

Query: 198 SSLPDSIGSLIS-LKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTL 256
            +LP+ +   +  L++L    N L+ LP  +G   SL+ L    N+L+ LPE +G    L
Sbjct: 107 VALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRLVAYVNQLQRLPEELGLCADL 166

Query: 257 EVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRA 316
             L V  N++  LP  ++ LSSLR L+VS N L  +   L     L ++++   F  L  
Sbjct: 167 VELDVATNHLTALPAMLAHLSSLRRLNVSSNRLVHLGPQLGDLPDLERLDL--RFNRLLR 224

Query: 317 LPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           LP  +G L  L  L + +N +  LP +   LS L++L + EN L
Sbjct: 225 LPDELGRLAQLNSLLLDHNDLASLPAALSTLSTLKLLSINENRL 268



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 99/205 (48%), Gaps = 23/205 (11%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIV-----------------------AV 131
           L L +  M+ I  LP  +  +SSL  L LS NRI                         +
Sbjct: 397 LRLLDAGMNLISDLPPELYAVSSLARLSLSGNRISDLPEDFCRLTRLERLLLGYNQLSTL 456

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           PA +  L+ L  L L  NR+  LP  + DL  L  L +  N ++ LP  + RL  LE LD
Sbjct: 457 PAGLNQLTHLTVLSLSGNRLTTLPPVVFDLTWLKELYVAANGLTELPTEVGRLTTLEILD 516

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L SN+L++LP+ +G  + L +L    N L  +P ++G   SL E+ +  N L  LP  + 
Sbjct: 517 LTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPPELA 576

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSL 276
           ++  L  L + +  +++LP  +++L
Sbjct: 577 RLTALRHLKLCHCRLQRLPRELAAL 601



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/160 (33%), Positives = 82/160 (51%), Gaps = 5/160 (3%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  +G+L++L  LDL+ N + A+P  +G    L +L+   NR+  +P S+G+L+SLV +
Sbjct: 502 LPTEVGRLTTLEILDLTSNHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEI 561

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  L+RL  L  L L    L  LP  + +L+    L   TN  +    T 
Sbjct: 562 DLSANELTTLPPELARLTALRHLKLCHCRLQRLPRELAALVPPPDLRFTTNSNDAYACTN 621

Query: 228 GQCSS----LRELRVDYN-RLKALPEAVGKIHTLEVLSVR 262
           G  ++    L  L  + N  L  LPEA+  I   E    R
Sbjct: 622 GDRTAYPGRLSWLSTEGNPELADLPEALASITEREFRGGR 661



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 103/201 (51%), Gaps = 14/201 (6%)

Query: 167 LDLRGNQISALPVA---LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           LD+   Q++   +A   LS L  L  L+   N    LP +I  L  L++L++  N+L  L
Sbjct: 27  LDISSRQLTNAQIAHLKLSCLKSLTFLNANYNRFDRLPPNIAKLAKLQRLMLVKNNLTML 86

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGK-IHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           P  I    +L +L V  N L ALPE + + +  LE LS   N +++LP  +    SL+ L
Sbjct: 87  PVEICHLRNLTKLEVGNNALVALPEGMFEAMPLLEELSCFMNQLQRLPREVGWARSLKRL 146

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN------- 335
               N+L+ +PE L     LV++++  N   L ALP  + +L  L  L++S+N       
Sbjct: 147 VAYVNQLQRLPEELGLCADLVELDVATNH--LTALPAMLAHLSSLRRLNVSSNRLVHLGP 204

Query: 336 QIRVLPDSFRMLSRL-RVLRV 355
           Q+  LPD  R+  R  R+LR+
Sbjct: 205 QLGDLPDLERLDLRFNRLLRL 225



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 72/140 (51%), Gaps = 6/140 (4%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +++  LP+ +G    L  L+ S NR+ +VPA++G L SL ++DL AN +  LP  +  L 
Sbjct: 520 NHLTALPEELGCCVRLTELEASHNRLASVPASLGNLVSLVEIDLSANELTTLPPELARLT 579

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS----LKKLIVETN 218
           +L +L L   ++  LP  L+ LV   +L   +N+  +   + G   +    L  L  E N
Sbjct: 580 ALRHLKLCHCRLQRLPRELAALVPPPDLRFTTNSNDAYACTNGDRTAYPGRLSWLSTEGN 639

Query: 219 -DLEELPHTIGQCSSLRELR 237
            +L +LP  +   +  RE R
Sbjct: 640 PELADLPEALASITE-REFR 658


>gi|386766573|ref|NP_001247320.1| scribbled, isoform O [Drosophila melanogaster]
 gi|383292968|gb|AFH06637.1| scribbled, isoform O [Drosophila melanogaster]
          Length = 2515

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 103/328 (31%), Positives = 162/328 (49%), Gaps = 51/328 (15%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS-- 157
           L DN I+ LP  I     LV LDLS N I  +P +I    +L+  D   N +  LP+S  
Sbjct: 575 LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 634

Query: 158 ---------------------IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
                                IG+L +L  L+LR N ++ LP +L++L RLEELDLG+N 
Sbjct: 635 ELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNE 694

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELPHTIG---------------QC--------SSL 233
           L  LP++IG+L +LK L ++ N L E+P  +G               +C        +SL
Sbjct: 695 LYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSL 754

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            +L V  N L+ LP+ +GK+  L +L V  N + QL  ++    SL EL ++ N+L+ +P
Sbjct: 755 TDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILP 814

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           +S+     L  +N   N   L +LP+ IG    L    + +N++  +P      + L VL
Sbjct: 815 KSIGKLKKLNNLNADRN--KLISLPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVL 872

Query: 354 RVQENPLEVPPRNIVEMGAQAVVQYMAD 381
            V  N L   P ++  +  +A+  +++D
Sbjct: 873 DVAGNRLTYLPFSLTTLKLKAL--WLSD 898



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/255 (33%), Positives = 141/255 (55%), Gaps = 3/255 (1%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           +++ LP++IG L +L SL+L EN +  +P ++  L  L++LDL  N +  LP++IG L +
Sbjct: 648 SLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFN 707

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L L GNQ++ +P  +  L  L  LD+  N L  LP+ I  L SL  L+V  N L+ L
Sbjct: 708 LKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVL 767

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           P  IG+   L  L+VD N+L  L +++G   +L  L +  N ++ LP ++  L  L  L+
Sbjct: 768 PDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLN 827

Query: 284 VSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDS 343
              N+L S+P+ +    +L   ++ +N   L  +P  I     L  LD++ N++  LP S
Sbjct: 828 ADRNKLISLPKEIGGCCSLNVFSVRDN--RLSRIPSEISQATELHVLDVAGNRLTYLPFS 885

Query: 344 FRMLSRLRVLRVQEN 358
              L +L+ L + +N
Sbjct: 886 LTTL-KLKALWLSDN 899



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 130/234 (55%), Gaps = 3/234 (1%)

Query: 107 WLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVY 166
           +LP+S+ +L  L  LDL  N +  +P TIG L +LK L L  N++ E+P  +G+L +L+ 
Sbjct: 674 YLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLC 733

Query: 167 LDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT 226
           LD+  N++  LP  ++ L  L +L +  N L  LPD IG L  L  L V+ N L +L  +
Sbjct: 734 LDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDS 793

Query: 227 IGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSF 286
           IG C SL EL +  N+L+ LP+++GK+  L  L+   N +  LP  +    SL    V  
Sbjct: 794 IGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKEIGGCCSLNVFSVRD 853

Query: 287 NELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           N L  +P  +  AT L  +++  N   L  LP S+  L+ L+ L +S+NQ + L
Sbjct: 854 NRLSRIPSEISQATELHVLDVAGN--RLTYLPFSLTTLK-LKALWLSDNQSQPL 904



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 135/257 (52%), Gaps = 2/257 (0%)

Query: 114 KLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQ 173
           +L  L  L LS+N I  +P  I     L +LDL  N I E+P+SI    +L   D  GN 
Sbjct: 566 QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNP 625

Query: 174 ISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           ++ LP +   L  L  L +   +L +LP++IG+L +L  L +  N L  LP ++ Q   L
Sbjct: 626 LTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRL 685

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N L  LPE +G +  L+ L +  N + ++P  + +L +L  LDVS N+LE +P
Sbjct: 686 EELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLP 745

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
           E +   T+L  + +  N   L+ LP  IG L  L  L +  N++  L DS      L  L
Sbjct: 746 EEINGLTSLTDLLVSQNL--LQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTEL 803

Query: 354 RVQENPLEVPPRNIVEM 370
            + EN L++ P++I ++
Sbjct: 804 VLTENQLQILPKSIGKL 820



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/126 (38%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QNKL+     L DSIG   SL  L L+EN++  +P +IG L  L  L+   N++I LP  
Sbjct: 784 QNKLIQ----LTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPKE 839

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL    +R N++S +P  +S+   L  LD+  N L+ LP S+ +L  LK L +  
Sbjct: 840 IGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPFSLTTL-KLKALWLSD 898

Query: 218 NDLEEL 223
           N  + L
Sbjct: 899 NQSQPL 904


>gi|119626869|gb|EAX06464.1| leucine rich repeat containing 7, isoform CRA_d [Homo sapiens]
          Length = 1573

 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/260 (36%), Positives = 137/260 (52%), Gaps = 3/260 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP +I  L +L  LD+S+N +   P  I     L  ++   N I +LPD    LL+L  L
Sbjct: 121 LPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLLNLTQL 180

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  LP    RLV+L  L+L  N+L +LP S+  L  L++L +  N+  ELP  +
Sbjct: 181 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVL 240

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +LREL +D N L+ LP  V K+  L  L +  N I+ +   +S   +L +L +S N
Sbjct: 241 DQIQNLRELWMDNNALQVLP-GVWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSN 299

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
            L+ +P+S+     L  + + +N   L  LP +IGNL +LEE D S N++  LP +   L
Sbjct: 300 MLQQLPDSIGLLKKLTTLKVDDN--QLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYL 357

Query: 348 SRLRVLRVQENPLEVPPRNI 367
             LR L V EN L   PR I
Sbjct: 358 HSLRTLAVDENFLPELPREI 377



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 174/373 (46%), Gaps = 75/373 (20%)

Query: 61  MIMCMCCVGQDGEKLSLIKLA--SLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLS 116
           ++ C C  G++ E +S++  +  SL +V  +    +  L+   +D   IE LP  +    
Sbjct: 48  LVPCRCFRGEE-EIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQ 106

Query: 117 SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSI------------------ 158
           +L  L + +N +  +P TI  L +LK+LD+  N + E P++I                  
Sbjct: 107 ALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISK 166

Query: 159 ----------------------------GDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
                                       G L+ L  L+LR N +  LP ++ +L +LE L
Sbjct: 167 LPDGFTQLLNLTQLYLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERL 226

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHT----------------------IG 228
           DLG+N    LP+ +  + +L++L ++ N L+ LP                        I 
Sbjct: 227 DLGNNEFGELPEVLDQIQNLRELWMDNNALQVLPGVWKLKMLVYLDMSKNRIETVDMDIS 286

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
            C +L +L +  N L+ LP+++G +  L  L V  N +  LP T+ +LS L E D S NE
Sbjct: 287 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNE 346

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLS 348
           LES+P ++ +  +L  + +  NF  L  LPR IG+ + +  + + +N++  LP+    + 
Sbjct: 347 LESLPSTIGYLHSLRTLAVDENF--LPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQ 404

Query: 349 RLRVLRVQENPLE 361
           +LRVL + +N L+
Sbjct: 405 KLRVLNLSDNRLK 417



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/195 (41%), Positives = 114/195 (58%), Gaps = 3/195 (1%)

Query: 96  NLQNKLMDN--IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           NL+   MDN  ++ LP  + KL  LV LD+S+NRI  V   I G  +L+ L L +N + +
Sbjct: 245 NLRELWMDNNALQVLP-GVWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQ 303

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           LPDSIG L  L  L +  NQ++ LP  +  L  LEE D   N L SLP +IG L SL+ L
Sbjct: 304 LPDSIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTL 363

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            V+ N L ELP  IG C ++  + +  N+L+ LPE +G++  L VL++  N +K LP + 
Sbjct: 364 AVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRLKNLPFSF 423

Query: 274 SSLSSLRELDVSFNE 288
           + L  L  L +S N+
Sbjct: 424 TKLKELAALWLSDNQ 438



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 134/258 (51%), Gaps = 24/258 (9%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD-------- 156
           +E+LP + G+L  L  L+L EN +  +P ++  L+ L++LDL  N   ELP+        
Sbjct: 187 LEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFGELPEVLDQIQNL 246

Query: 157 --------------SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPD 202
                          +  L  LVYLD+  N+I  + + +S    LE+L L SN L  LPD
Sbjct: 247 RELWMDNNALQVLPGVWKLKMLVYLDMSKNRIETVDMDISGCEALEDLLLSSNMLQQLPD 306

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
           SIG L  L  L V+ N L  LP+TIG  S L E     N L++LP  +G +H+L  L+V 
Sbjct: 307 SIGLLKKLTTLKVDDNQLTMLPNTIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVD 366

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N + +LP  + S  ++  + +  N+LE +PE +     L  +N+ +N   L+ LP S  
Sbjct: 367 ENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQKLRVLNLSDN--RLKNLPFSFT 424

Query: 323 NLEMLEELDISNNQIRVL 340
            L+ L  L +S+NQ + L
Sbjct: 425 KLKELAALWLSDNQSKAL 442



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 3/121 (2%)

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGN 309
           G+   + VL   + +++Q+P  + +   +L EL +  N++E +P+ L     L K++I +
Sbjct: 56  GEEEIISVLDYSHCSLQQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPD 115

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVE 369
           N  DL  LP +I +L  L+ELDIS N ++  P++ +    L ++    NP+   P    +
Sbjct: 116 N--DLSNLPTTIASLVNLKELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQ 173

Query: 370 M 370
           +
Sbjct: 174 L 174


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|3252981|gb|AAC40175.1| Ras-binding protein SUR-8 [Mus musculus]
          Length = 582

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP ++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP S+ NL+
Sbjct: 112 IHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLPDSLDNLK 169

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            L  LD+ +N++R +P     L  L  L ++ N
Sbjct: 170 KLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/326 (29%), Positives = 151/326 (46%), Gaps = 51/326 (15%)

Query: 91  GTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD----- 145
           G   L+L N+ + +I   P+ +  ++ L  LD+S N++ ++P  IG L +L +LD     
Sbjct: 14  GLLTLDLSNQGLTSI---PEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLDADGNM 70

Query: 146 ------------------LHANRIIELPDSIGDL-----------------------LSL 164
                             +H+N + ELPD + DL                       L+L
Sbjct: 71  MTSLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNL 130

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
           V  D   N +S  P  + +L +L EL +  N L+ +P  + SL +L+KL V  N+L   P
Sbjct: 131 VNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFP 190

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             + +   LREL +  N+L  +P  V  +  LE LSV  NN+   P  +  L  LREL +
Sbjct: 191 PGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYI 250

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+L  VP  +C    L K+++ NN  +L   P  +  L+ L EL I +NQ+  +P   
Sbjct: 251 HDNQLTEVPSGVCSLPNLEKLSVYNN--NLSTFPPGVEKLQKLRELYIHHNQLTEVPSGV 308

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEM 370
             L  L VL V  NP+   P  +  +
Sbjct: 309 CSLPNLEVLSVGNNPIRCLPDEVTRL 334



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/279 (30%), Positives = 133/279 (47%), Gaps = 35/279 (12%)

Query: 102 MDNIEWL----------PDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRI 151
           + N+EWL          P  I    +LV+ D S N +   P  +  L  L++L ++ N++
Sbjct: 104 LQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQL 163

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
            E+P  +  L +L  L +  N +S  P  + +L +L EL +  N L+ +P  + SL +L+
Sbjct: 164 TEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLE 223

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           KL V  N+L   P  + +   LREL +  N+L  +P  V  +  LE LSV  NN+   P 
Sbjct: 224 KLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPP 283

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L  LREL +  N+L  VP  +C                      S+ NLE+L    
Sbjct: 284 GVEKLQKLRELYIHHNQLTEVPSGVC----------------------SLPNLEVLS--- 318

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           + NN IR LPD    L+R++ L V     +  PR ++++
Sbjct: 319 VGNNPIRCLPDEVTRLTRMKTLSVPSCQFDEFPRQVLQL 357



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 138/281 (49%), Gaps = 5/281 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  +  L +L  L +  N +   P  +  L  L++L +H N++ E+P  +  L +L  L
Sbjct: 212 VPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEVPSGVCSLPNLEKL 271

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  N +S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N +  LP  +
Sbjct: 272 SVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSVGNNPIRCLPDEV 331

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL---PTTMSSLSSLRELDV 284
            + + ++ L V   +    P  V ++ TLE+L    N  ++    P  + +L  L  L +
Sbjct: 332 TRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQHLWFLAL 391

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L ++P ++     L ++ + NN  D    P  +  L  +E+LDI NN I  +P + 
Sbjct: 392 ENNLLRTLPSTMSHLHNLRQVQLWNNKFD--TFPEVLCELPAMEKLDIKNNNITRIPTAL 449

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
               +LR L V  NPL  PP+++ + G  A++ ++    EK
Sbjct: 450 HRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEK 490



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 64/117 (54%), Gaps = 5/117 (4%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +PD +G L  L  L L  N +  +P+T+  L +L+++ L  N+    P+ + +L ++  L
Sbjct: 376 VPDEVGNLQHLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKL 435

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-----GSLISLKKLIVETND 219
           D++ N I+ +P AL R  +L +LD+  N L+  P  +     G++++  K   E ++
Sbjct: 436 DIKNNNITRIPTALHRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDE 492


>gi|260788680|ref|XP_002589377.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
 gi|229274554|gb|EEN45388.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
          Length = 470

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/269 (30%), Positives = 139/269 (51%), Gaps = 2/269 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +P++IG+L  L  LD   N + ++P  IG L  +  L ++ N++ E+P  +  L 
Sbjct: 46  NKLTSIPEAIGRLQKLSRLDADGNMLTSLPQAIGSLQKMTDLYINDNQLTEVPPGVCSLP 105

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N++S  P  + +L +L EL +  N L+ +P  + SL +L+ L V  N L  
Sbjct: 106 NLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLEVLGVGNNKLST 165

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + +   LREL ++ N+L  +P  V  +  LEVLSV  NN+   P  +  L  +REL
Sbjct: 166 FPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVREL 225

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L  VP  +C    L  +++ NN  +L   P  +  L+ + +L I  NQ+  +P 
Sbjct: 226 YIYGNQLTEVPSGVCSLPNLEVLSVFNN--NLSTFPLGVEKLQKVRKLYIYGNQLTEVPS 283

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
              +L  L VL V  NP+   P ++  + 
Sbjct: 284 GVCLLPNLEVLSVGMNPIRRLPNDVTRLA 312



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/246 (31%), Positives = 126/246 (51%), Gaps = 2/246 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           + LDLS   + ++P  +  ++ L  L +  N++  +P++IG L  L  LD  GN +++LP
Sbjct: 16  LKLDLSNRGLTSIPEEVFAITDLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLP 75

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            A+  L ++ +L +  N L+ +P  + SL +L+ L V  N L   P  + +   LREL +
Sbjct: 76  QAIGSLQKMTDLYINDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYI 135

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
           + N+L  +P  V  +  LEVL V  N +   P  +  L  LREL ++ N+L  VP  +C 
Sbjct: 136 NDNQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCS 195

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
              L  +++ NN  +L   P  +  L+ + EL I  NQ+  +P     L  L VL V  N
Sbjct: 196 LPNLEVLSVFNN--NLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNN 253

Query: 359 PLEVPP 364
            L   P
Sbjct: 254 NLSTFP 259



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 140/273 (51%), Gaps = 1/273 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  +P  +  L +L  L +  N++   P  +  L  L++L ++ N++ E+P  +  L 
Sbjct: 138 NQLTEVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCSLP 197

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N +S  P+ + +L ++ EL +  N L+ +P  + SL +L+ L V  N+L  
Sbjct: 198 NLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLST 257

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
            P  + +   +R+L +  N+L  +P  V  +  LEVLSV  N I++LP  ++ L+ L+ L
Sbjct: 258 FPLGVEKLQKVRKLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTL 317

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFA-DLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V   + +  P  +    TL ++  G N       +P  +GNL+ L  L + NN +R LP
Sbjct: 318 SVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLP 377

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQA 374
            +   L  LRV+++  N  +  P  + E+ A A
Sbjct: 378 STMSHLHNLRVVQLPNNKFDTFPEVLCELPAMA 410



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 133/288 (46%), Gaps = 28/288 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+   P  + KL  +  L +  N++  VP+ +  L +L+ L +  N +   P  +  L 
Sbjct: 207 NNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQ 266

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            +  L + GNQ++ +P  +  L  LE L +G N +  LP+ +  L  LK L V     +E
Sbjct: 267 KVRKLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDE 326

Query: 223 LPHTIGQCSSLRELRVDYN---RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
            P  +    +L EL    N   +   +P+ VG +  L +LS+  N ++ LP+TMS L +L
Sbjct: 327 FPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSHLHNL 386

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           R + +  N+ ++ PE LC                          L  + +LDI NN I  
Sbjct: 387 RVVQLPNNKFDTFPEVLC-------------------------ELPAMAKLDIRNNNITR 421

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRD 387
           L  +     +LR L V  NPL  PP+++ + G  A++ ++     K +
Sbjct: 422 LLTALHRADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEARKGE 469


>gi|301764090|ref|XP_002917472.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat and IQ
           domain-containing protein 4-like [Ailuropoda
           melanoleuca]
          Length = 560

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/295 (32%), Positives = 152/295 (51%), Gaps = 8/295 (2%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S+G+ S    LDLS NR+ ++P T+  L+ + ++ L  N + ++P  I    S+  L
Sbjct: 226 LPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGNPLEKVPRLICRWTSVHLL 285

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L    +  L  +  RL  L  LDL  N+L   P  + +L  L+ L ++ N + +LP   
Sbjct: 286 YLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEILALDDNKIWQLPSDF 345

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN---IKQLPTTMSSLSSLRELDV 284
           G  S L+ L +  N+  + PE +  + +LE L +  +       LP  +S L SL+EL +
Sbjct: 346 GSLSKLKMLGLTGNQFLSFPEEILPLESLEKLYIGQDQGAKFTSLPEHISKLQSLKELYI 405

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N LE +P SL     L  ++  +N   L+ LP SI   + L+EL + +N I  LP++ 
Sbjct: 406 ENNHLEYLPTSLGSMPNLEILDCRHN--RLKQLPDSICQAQALKELLLEDNLITCLPENL 463

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSW 399
             L  L+VL + +NPLE PPR +   G QA+    A+  +KR+ K    K +  W
Sbjct: 464 DSLVNLKVLTLVDNPLEDPPREVCAEGIQAI---WANFKKKRNMKIMATKIQAWW 515



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 133/281 (47%), Gaps = 27/281 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRII---------- 152
           + IE +P  I +L ++  L L+EN++ A+   +G LSSL+ LDL  N ++          
Sbjct: 58  NRIEAIPRGIQRLKNVRILYLNENKLRALCPELGRLSSLEGLDLSHNPLLRSSLPVLGGL 117

Query: 153 --------------ELP-DSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
                         E+P      L  L  L L GN + +LP  +    +L E+ L  N  
Sbjct: 118 RRLRELRLYHTGLAEIPVGLCKLLHHLELLGLSGNDLKSLPKEIENQTKLREIYLKQNQF 177

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
              P  +  L  L+ + ++ N L  +P  IG  + L++  V +N L  LPE++G+     
Sbjct: 178 EVFPPELCVLYDLEVIDLDKNRLTAVPEEIGNLTRLQKFYVAHNSLPVLPESLGRCSRXS 237

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
           VL + YN +  +P T++ L+ + E+ +S N LE VP  +C  T++  + + N    LR L
Sbjct: 238 VLDLSYNRLHSIPHTLAELTGMTEIGLSGNPLEKVPRLICRWTSVHLLYLCN--TGLRGL 295

Query: 318 PRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            RS   L  L  LD+S N +   P     L  L +L + +N
Sbjct: 296 RRSFRRLGNLRFLDLSQNHLERCPSEVSALKHLEILALDDN 336



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 125/295 (42%), Gaps = 50/295 (16%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           +D S   +  +P+ I  L  L++  L  NRI  +P  I  L ++  L L  N++ AL   
Sbjct: 30  IDASNQSLTTIPSQILELEELEEAHLENNRIEAIPRGIQRLKNVRILYLNENKLRALCPE 89

Query: 181 LSRLVRLEELDL------------------------------------------------ 192
           L RL  LE LDL                                                
Sbjct: 90  LGRLSSLEGLDLSHNPLLRSSLPVLGGLRRLRELRLYHTGLAEIPVGLCKLLHHLELLGL 149

Query: 193 GSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGK 252
             N+L SLP  I +   L+++ ++ N  E  P  +     L  + +D NRL A+PE +G 
Sbjct: 150 SGNDLKSLPKEIENQTKLREIYLKQNQFEVFPPELCVLYDLEVIDLDKNRLTAVPEEIGN 209

Query: 253 IHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFA 312
           +  L+   V +N++  LP ++   S    LD+S+N L S+P +L   T + ++ +  N  
Sbjct: 210 LTRLQKFYVAHNSLPVLPESLGRCSRXSVLDLSYNRLHSIPHTLAELTGMTEIGLSGN-- 267

Query: 313 DLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
            L  +PR I     +  L + N  +R L  SFR L  LR L + +N LE  P  +
Sbjct: 268 PLEKVPRLICRWTSVHLLYLCNTGLRGLRRSFRRLGNLRFLDLSQNHLERCPSEV 322



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 8/112 (7%)

Query: 68  VGQDGEKLSLIKLASLIEVSSK-KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSEN 126
           +GQD       K  SL E  SK +  ++L ++N   +++E+LP S+G + +L  LD   N
Sbjct: 379 IGQDQGA----KFTSLPEHISKLQSLKELYIEN---NHLEYLPTSLGSMPNLEILDCRHN 431

Query: 127 RIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           R+  +P +I    +LK+L L  N I  LP+++  L++L  L L  N +   P
Sbjct: 432 RLKQLPDSICQAQALKELLLEDNLITCLPENLDSLVNLKVLTLVDNPLEDPP 483


>gi|442621260|ref|NP_001262988.1| scribbled, isoform T [Drosophila melanogaster]
 gi|440217925|gb|AGB96368.1| scribbled, isoform T [Drosophila melanogaster]
          Length = 2444

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/260 (33%), Positives = 125/260 (48%), Gaps = 25/260 (9%)

Query: 102 MDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL 161
            ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L
Sbjct: 46  ANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHL 105

Query: 162 LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLE 221
            SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L        
Sbjct: 106 QSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL-------- 157

Query: 222 ELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
                      LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L E
Sbjct: 158 ----------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHE 202

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           L +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALP 260

Query: 342 DSFRMLSRLRVLRVQENPLE 361
           D    LSRL +L++ +N L+
Sbjct: 261 DGIAKLSRLTILKLDQNRLQ 280


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 152/302 (50%), Gaps = 23/302 (7%)

Query: 104 NIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLS 163
           N++ LP  + KLS L SLDLS N  +++P  +  L ++K+L L+A  +  +P ++  L  
Sbjct: 126 NLDSLPPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKELRLYACFMATVPPAVLKLTQ 185

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE- 222
           L  L+L GN    LP  LSRL  +  L L    + ++P     L  L++L +  N L+  
Sbjct: 186 LEKLNLSGNWGIHLPDGLSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTS 245

Query: 223 -LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
            LP  +G  ++++ L + + +L  LP  VG++  LE L +  N ++ LP  +  L+ ++ 
Sbjct: 246 TLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTKVKH 305

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNN---------------------FADLRALPRS 320
           LD+S+ +L ++P  +   T L ++++ NN                        L  LP  
Sbjct: 306 LDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHCQLHTLPPE 365

Query: 321 IGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMA 380
           +G L  LE LD+S+N ++ LP     L+ +  L V  NPL  PP  +   G  A+ +Y  
Sbjct: 366 VGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPPSEVCRQGISAIRRYFD 425

Query: 381 DL 382
           +L
Sbjct: 426 EL 427


>gi|149040409|gb|EDL94447.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Rattus norvegicus]
          Length = 524

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 161/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 493



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/254 (33%), Positives = 142/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   +  L RL  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITAVEKDVRNLPRLSTLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPVG-GPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 51/278 (18%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
             +   T L  + +G N   L  LP  IG L  +++ D
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGRLLWMQDND 523



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 54/253 (21%)

Query: 94  DLNLQ-NKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPAT------------------ 134
           +L+LQ N+L+D    LPD+IG LSSL  L L  NR+ A+P +                  
Sbjct: 265 NLDLQHNELLD----LPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNIS 320

Query: 135 ---------------------------IGG---LSSLKKLDLHANRIIELPDSIGDLLS- 163
                                      +GG    S++  L++  NRI ++P  I      
Sbjct: 321 TLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKV 380

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEEL 223
           L  L+++ NQ+++LP+       + EL+L +N L+ +P+ +  L+SL+ LI+  N L++L
Sbjct: 381 LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSLEVLILSNNLLKKL 440

Query: 224 PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELD 283
           PH +G    LREL ++ N+L++LP  +  +  L+ L +  N +  LP  +  L++L  L 
Sbjct: 441 PHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHLTNLTHLG 500

Query: 284 VSFNELESVPESL 296
           +  N L  +PE +
Sbjct: 501 LGENLLTHLPEEI 513


>gi|31543701|ref|NP_062632.2| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|270341361|ref|NP_001161977.1| leucine-rich repeat protein SHOC-2 [Mus musculus]
 gi|51338746|sp|O88520.2|SHOC2_MOUSE RecName: Full=Leucine-rich repeat protein SHOC-2; AltName:
           Full=Protein soc-2 homolog; AltName: Full=Protein sur-8
           homolog
 gi|26346735|dbj|BAC37016.1| unnamed protein product [Mus musculus]
 gi|29437101|gb|AAH49775.1| Soc-2 (suppressor of clear) homolog (C. elegans) [Mus musculus]
 gi|52789459|gb|AAH83060.1| Shoc2 protein [Mus musculus]
 gi|74138728|dbj|BAE27179.1| unnamed protein product [Mus musculus]
 gi|94962414|gb|ABF48505.1| Shoc2 [Mus musculus]
 gi|148669769|gb|EDL01716.1| soc-2 (suppressor of clear) homolog (C. elegans), isoform CRA_b
           [Mus musculus]
          Length = 582

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/270 (34%), Positives = 160/270 (59%), Gaps = 9/270 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
             LP+    L  L+ L +  N L   PR I
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLSTLPRGI 490



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLSTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/254 (32%), Positives = 141/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPSVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+ +   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITTVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNDLLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLSTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/100 (30%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP ++  L+ L EL +  N+L+S+P  +     L+ + +  N   L +LP
Sbjct: 105 LDLSKRSIHILPPSVKELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPSVVYRLDSLTTLYLRFN 202


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/276 (33%), Positives = 146/276 (52%), Gaps = 18/276 (6%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
            N   LP  I +L +L  LDL +N++   PA I  L  L+ LDL  NR++ LP+ IG L 
Sbjct: 58  QNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQ 117

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L  N+++  P  + +L  L++L L  N L++LP  IG L +L+ L ++ N    
Sbjct: 118 NLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 177

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IGQ  +L+ L +  N+L  LP  +G++  L+ L +R N +  LP  +  L +L+ L
Sbjct: 178 LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL 237

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI----- 337
               N L ++P+ +     L  +N+ NN   L  LP+ IG L+ L++L++  N +     
Sbjct: 238 CSPENRLTALPKEMGQLKNLQTLNLVNN--RLTVLPKEIGQLQNLQDLELLMNPLSLKER 295

Query: 338 ----RVLPDS---FRMLSRLRVLR----VQENPLEV 362
               ++ PDS    R ++   V R     QE PL+V
Sbjct: 296 KRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKV 331



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 134/249 (53%), Gaps = 2/249 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           LDLS      +P  I  L +L++LDL  N++   P  I +L  L  LDL  N++  LP  
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L+EL L  N L++ P  IG L +L+KL +  N L  LP  IGQ  +L+ L +  
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N+   LP+ +G++  L+ L+++ N +  LP  +  L +L+EL +  N L  +P+ +    
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +    N   L ALP+ +G L+ L+ L++ NN++ VLP     L  L+ L +  NPL
Sbjct: 233 NLQTLCSPEN--RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPL 290

Query: 361 EVPPRNIVE 369
            +  R  ++
Sbjct: 291 SLKERKRIQ 299



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/212 (36%), Positives = 123/212 (58%), Gaps = 3/212 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K  ++L+L++   + +   P  I +L  L SLDLSENR+V +P  IG L +L++L
Sbjct: 66  EIEQLKNLQELDLRD---NQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQEL 122

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L+ N++   P  IG L +L  L L  N+++ALP  + +L  L+ LDL +N  + LP  I
Sbjct: 123 GLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTILPKEI 182

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L ++ N L  LP  IGQ  +L+EL +  NRL  LP+ +G++  L+ L    N
Sbjct: 183 GQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTLCSPEN 242

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESL 296
            +  LP  M  L +L+ L++  N L  +P+ +
Sbjct: 243 RLTALPKEMGQLKNLQTLNLVNNRLTVLPKEI 274



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 165/354 (46%), Gaps = 61/354 (17%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           +LA+L +E+   +  ++L L+N   + +  LP  IG+L +L +L   ENR+ A+P  +G 
Sbjct: 197 QLATLPVEIGQLQNLQELYLRN---NRLTVLPKEIGQLQNLQTLCSPENRLTALPKEMGQ 253

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISA--------------------- 176
           L +L+ L+L  NR+  LP  IG L +L  L+L  N +S                      
Sbjct: 254 LKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVA 313

Query: 177 -------------------------------LPVALSRLVRLEELDLGSNNLSSLPDSIG 205
                                           P  + +   L EL L     S+LP  I 
Sbjct: 314 EDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEIS 373

Query: 206 SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNN 265
            L +LK L +  N L+ +P  IGQ  +L  L ++ N L+ LP+ +G++  L+ LS+  N 
Sbjct: 374 RLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNT 433

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           +K  P  +  L  L++LD+S N+  + P+ +     L  +N+  N   L  L   IG L+
Sbjct: 434 LKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRN--QLTNLTAEIGQLQ 491

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            L+ELD+++NQ  VLP     L +L+ L ++ N L   P    E+G    +Q++
Sbjct: 492 NLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTTLP---TEIGQLQNLQWL 542



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 121/227 (53%), Gaps = 2/227 (0%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LDL       LP  I  L +L  LDLR NQ++  P  +  L +LE LDL  N L  LP+ 
Sbjct: 53  LDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNE 112

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           IG L +L++L +  N L   P  IGQ  +L++L +  NRL ALP+ +G++  L+ L ++ 
Sbjct: 113 IGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQN 172

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N    LP  +  L +L+ L++  N+L ++P  +     L ++ + NN   L  LP+ IG 
Sbjct: 173 NQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNN--RLTVLPKEIGQ 230

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           L+ L+ L    N++  LP     L  L+ L +  N L V P+ I ++
Sbjct: 231 LQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQL 277



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 92/305 (30%), Positives = 142/305 (46%), Gaps = 54/305 (17%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN--------RIIEL-PDSI 158
           LP  +G+L +L +L+L  NR+  +P  IG L +L+ L+L  N        RI +L PDS 
Sbjct: 247 LPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSN 306

Query: 159 GDLLSL----VYLDLRGNQ---------------------------------------IS 175
            DL  +    VY +L   Q                                        S
Sbjct: 307 LDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFS 366

Query: 176 ALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRE 235
            LP  +SRL  L+ L LG N L ++P  IG L +L+ L +E N+LE LP  IGQ  +L+ 
Sbjct: 367 TLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQR 426

Query: 236 LRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPES 295
           L +  N LK  P  + ++  L+ L +  N     P  +  L +L+ L++  N+L ++   
Sbjct: 427 LSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAE 486

Query: 296 LCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRV 355
           +     L ++++ +N      LP+ IG L+ L+ LD+ NNQ+  LP     L  L+ L +
Sbjct: 487 IGQLQNLQELDLNDN--QFTVLPKEIGKLKKLQTLDLRNNQLTTLPTEIGQLQNLQWLYL 544

Query: 356 QENPL 360
           Q N L
Sbjct: 545 QNNQL 549



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/235 (32%), Positives = 125/235 (53%), Gaps = 6/235 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L++  LDL G   + LP  + +L  L+ELDL  N L++ P  I  L  L+
Sbjct: 38  MDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLE 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L  LP+ IG+  +L+EL +  N+L   P+ +G++  L+ L +  N +  LP 
Sbjct: 98  SLDLSENRLVMLPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L+ LD+  N+   +P+ +     L  +N+ +N   L  LP  IG L+ L+EL 
Sbjct: 158 EIGQLKNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDN--QLATLPVEIGQLQNLQELY 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           + NN++ VLP     L  L+ L   EN L   P+   EMG    +Q + +LV  R
Sbjct: 216 LRNNRLTVLPKEIGQLQNLQTLCSPENRLTALPK---EMGQLKNLQTL-NLVNNR 266



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 146/310 (47%), Gaps = 44/310 (14%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   +  + LNLQ+   + +  LP  IG+L +L  L L  NR+  +P  IG L +L+ L
Sbjct: 181 EIGQLQNLQTLNLQD---NQLATLPVEIGQLQNLQELYLRNNRLTVLPKEIGQLQNLQTL 237

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
               NR+  LP  +G L +L  L+L  N+++ LP  + +L  L++L+L  N     P S+
Sbjct: 238 CSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMN-----PLSL 292

Query: 205 GSLISLKKLIVETN-DLEE---------------------------------LPHTIGQC 230
                ++KL  ++N DL E                                  P  I + 
Sbjct: 293 KERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILKF 352

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            +LREL +       LP+ + ++  L+ L++  N +K +P+ +  L +L  L++  NELE
Sbjct: 353 RNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELE 412

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRL 350
            +P+ +     L ++++  N   L+  P  I  L+ L++LD+S NQ    P     L  L
Sbjct: 413 RLPKEIGQLRNLQRLSLHQN--TLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENL 470

Query: 351 RVLRVQENPL 360
           + L +Q N L
Sbjct: 471 QTLNLQRNQL 480



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/260 (29%), Positives = 121/260 (46%), Gaps = 32/260 (12%)

Query: 94  DLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE 153
           DL LQ K    +   P  I K  +L  L L +     +P  I  L +LK L L  N +  
Sbjct: 333 DLRLQYKNFSQL--FPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKN 390

Query: 154 LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKL 213
           +P  IG                       +L  LE L+L +N L  LP  IG L +L++L
Sbjct: 391 IPSEIG-----------------------QLKNLEALNLEANELERLPKEIGQLRNLQRL 427

Query: 214 IVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM 273
            +  N L+  P  I Q   L++L +  N+    P+ +GK+  L+ L+++ N +  L   +
Sbjct: 428 SLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEI 487

Query: 274 SSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDIS 333
             L +L+ELD++ N+   +P+ +     L  +++ NN   L  LP  IG L+ L+ L + 
Sbjct: 488 GQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNN--QLTTLPTEIGQLQNLQWLYLQ 545

Query: 334 NNQIRVLPDSFRMLSRLRVL 353
           NNQ+     S +   R+R L
Sbjct: 546 NNQL-----SLKEQERIRKL 560


>gi|354497491|ref|XP_003510853.1| PREDICTED: leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
 gi|344249840|gb|EGW05944.1| Leucine-rich repeat protein SHOC-2 [Cricetulus griseus]
          Length = 582

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/273 (34%), Positives = 161/273 (58%), Gaps = 9/273 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +L++LD++ N++  +P  IG  + +  LDL  N +++LPD+IG+L 
Sbjct: 225 NKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLS 284

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI-GSLISLKKLIVETNDLE 221
           SL  L LR N++SA+P +L++   LEEL+L +NN+S+LP+S+  SL+ L  L +  N  +
Sbjct: 285 SLNRLGLRYNRLSAIPRSLAKCSALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQ 344

Query: 222 ELPHTIG---QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLS 277
             P  +G   Q S++  L +++NR+  +P  +  +   L  L+++ N +  LP    + +
Sbjct: 345 LYP--VGGPSQFSTIYSLNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWT 402

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
           S+ EL+++ N+L  +PE +    +L  + + NN   L+ LP  +GNL  L ELD+  N++
Sbjct: 403 SMVELNLATNQLTKIPEDVSGLVSLEVLILSNNL--LKKLPHGLGNLRKLRELDLEENKL 460

Query: 338 RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
             LP+    L  L+ L +  N L   PR I  +
Sbjct: 461 ESLPNEIAYLKDLQKLVLTNNQLTTLPRGIGHL 493



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 154/327 (47%), Gaps = 52/327 (15%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDL- 161
           + +E LP  IG  + + +LDL  N ++ +P TIG LSSL +L L  NR+  +P S+    
Sbjct: 248 NQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCS 307

Query: 162 ----------------------------------------------LSLVY-LDLRGNQI 174
                                                          S +Y L++  N+I
Sbjct: 308 ALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSLNMEHNRI 367

Query: 175 SALPVAL-SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
           + +P  + SR   L +L++  N L+SLP   G+  S+ +L + TN L ++P  +    SL
Sbjct: 368 NKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPEDVSGLVSL 427

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
             L +  N LK LP  +G +  L  L +  N ++ LP  ++ L  L++L ++ N+L ++P
Sbjct: 428 EVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTNNQLTTLP 487

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRMLSRLRV 352
             +   T L  + +G N   L  LP  IG LE LEEL +++N  +  LP    + S+L +
Sbjct: 488 RGIGHLTNLTHLGLGENL--LTHLPEEIGTLENLEELYLNDNPNLHSLPFELALCSKLSI 545

Query: 353 LRVQENPLEVPPRNIVEMGAQAVVQYM 379
           + ++  PL   P  IV  G   ++Q++
Sbjct: 546 MSIENCPLSHLPPQIVAGGPSFIIQFL 572



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/254 (33%), Positives = 142/254 (55%), Gaps = 8/254 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP  +G L +L++L LSEN + ++P ++  L  L+ LDL  N++ E+P  +  L 
Sbjct: 133 NKLQSLPAELGCLLNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNKLREIPPVVYRLD 192

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   +  L +L  L +  N +  LP  IG L +L  L V  N LE 
Sbjct: 193 SLTTLYLRFNRITAVEKDIKNLPKLSMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEH 252

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C+ +  L + +N L  LP+ +G + +L  L +RYN +  +P +++  S+L EL
Sbjct: 253 LPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIPRSLAKCSALEEL 312

Query: 283 DVSFNELESVPESLCFATTLVKMN---IGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
           ++  N + ++PESL   ++LVK+N   +  N   L  +         +  L++ +N+I  
Sbjct: 313 NLENNNISTLPESLL--SSLVKLNSLTLARNCFQLYPV-GGPSQFSTIYSLNMEHNRINK 369

Query: 340 LPDSFRMLSRLRVL 353
           +P  F + SR +VL
Sbjct: 370 IP--FGIFSRAKVL 381



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           LN+++  ++ I +   S  K+  L  L++ +N++ ++P   G  +S+ +L+L  N++ ++
Sbjct: 360 LNMEHNRINKIPFGIFSRAKV--LSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKI 417

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           P+ +  L+SL  L L  N +  LP  L  L +L ELDL  N L SLP+ I  L  L+KL+
Sbjct: 418 PEDVSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLV 477

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +  N L  LP  IG  ++L  L +  N L  LPE +G +  LE L +  N N+  LP  +
Sbjct: 478 LTNNQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFEL 537

Query: 274 SSLSSLRELDVSFNELESVP 293
           +  S L  + +    L  +P
Sbjct: 538 ALCSKLSIMSIENCPLSHLP 557



 Score = 42.0 bits (97), Expect = 0.59,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 2/100 (2%)

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L +   +I  LP ++  L+ L EL +  N+L+S+P  L     L+ + +  N   L +LP
Sbjct: 105 LDLSKRSIHALPPSVKELTQLTELYLYSNKLQSLPAELGCLLNLMTLALSEN--SLTSLP 162

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
            S+ NL+ L  LD+ +N++R +P     L  L  L ++ N
Sbjct: 163 DSLDNLKKLRMLDLRHNKLREIPPVVYRLDSLTTLYLRFN 202


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 101/309 (32%), Positives = 150/309 (48%), Gaps = 51/309 (16%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S+   S L  LDL  N++  +P+ I  L SL  L L  NRI  + D +  L++L  L
Sbjct: 224 LPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 283

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I  L  A+  LV L  LD+  N+L  LP+ IG+ ++L  L ++ N+L ++P +I
Sbjct: 284 SLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSI 343

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-SSLSSLRELDVSF 286
           G   SL  L + YNRL ++P  +    +++  +V  N I QLP  M +SLS L  + +S 
Sbjct: 344 GNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSR 403

Query: 287 NELESVPES-------------------------LCFATTLVKMNIGNNFADLRALPRSI 321
           N+  S P                              A  L K+N+  N   L ALP  I
Sbjct: 404 NQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENM--LTALPLDI 461

Query: 322 G-----------------------NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQEN 358
           G                       NL+ LE L +SNN ++ +P++   L RLR+L ++EN
Sbjct: 462 GTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEEN 521

Query: 359 PLEVPPRNI 367
            +EV P  I
Sbjct: 522 RIEVLPHEI 530



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 152/273 (55%), Gaps = 7/273 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  L  +IG L +L +LD+S N +  +P  IG   +L  LDL  N ++++PDSIG+L 
Sbjct: 288 NKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLK 347

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SLV L +R N++S++P  L     ++E ++  N ++ LPD  + SL  L  + +  N   
Sbjct: 348 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 407

Query: 222 ELPHTIG--QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             P T G  Q +++  + +++NR+  +P  +  +   L  L+++ N +  LP  + +  +
Sbjct: 408 SYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVN 466

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           + EL+++ N L+ +P+ +     L  + + NN   L+ +P +IGNL  L  LD+  N+I 
Sbjct: 467 MVELNLATNALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRRLRILDLEENRIE 524

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           VLP    +L  L+ L +Q N + + PR+I  +G
Sbjct: 525 VLPHEIGLLHELQRLILQTNQITMLPRSIGHLG 557



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 79/332 (23%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            N+L+D    +PDSIG L SLV L +  NR+ +VPAT+    S+ + ++  N I +LPD 
Sbjct: 333 HNELLD----IPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDG 388

Query: 158 IGDLLS-------------------------------------------------LVYLD 168
           +   LS                                                 L  L+
Sbjct: 389 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 448

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           ++ N ++ALP+ +   V + EL+L +N L  LPD I +L +L+ LI+  N L+++P+TIG
Sbjct: 449 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 508

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               LR L ++ NR++ LP  +G +H L+ L ++ N I  LP ++  L +L  L VS N 
Sbjct: 509 NLRRLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 568

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRML 347
           L+ +PE                          IG+LE LE L I+ N  +  LP    + 
Sbjct: 569 LQFLPE-------------------------EIGSLESLENLYINQNPGLEKLPFELALC 603

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L+ L + + PL   P  I   G   V+Q++
Sbjct: 604 QNLKYLNIDKCPLSTIPPEIQAGGPSLVLQWL 635



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I +      +   L  L++ EN + A+P  IG   ++ +L+L  N + +L
Sbjct: 423 INLEHNRIDKIPY--GIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 480

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I +L +L  L L  N +  +P  +  L RL  LDL  N +  LP  IG L  L++LI
Sbjct: 481 PDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDLEENRIEVLPHEIGLLHELQRLI 540

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           ++TN +  LP +IG   +L  L V  N L+ LPE +G + +LE L +  N  +++LP  +
Sbjct: 541 LQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 600

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L+ L++    L ++P
Sbjct: 601 ALCQNLKYLNIDKCPLSTIP 620


>gi|426227298|ref|XP_004007755.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Ovis aries]
          Length = 870

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ I  L+++ SL+ S N I   P  I    ++ K++L  N+I+  P  +  L SL YL
Sbjct: 443 IPEYISHLNNMFSLEFSGNFITDFPIEIKNCKNIAKVELSYNKIMYFPLGLCALDSLYYL 502

Query: 168 DLRGNQISALPVALS-----------------------RLVRLEELDLGSNNLSSLPDSI 204
              GN IS +PV +S                        L+ LE LDLG N +  +P SI
Sbjct: 503 SFTGNYISEIPVDISFNKQLLHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIPPSI 562

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +++SL  LI+  N LE  P  +    +LR L +  N+++ +P  +  +  ++ L++  N
Sbjct: 563 SNMVSLHVLILCYNKLETFPTEVCALDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN 622

Query: 265 NIKQLPTTMSSLSSLRELDVS---FNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
                P  +  L SL EL++S     +L  +PE L   T L +++I NN   +R +P +I
Sbjct: 623 QFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNN--AIREMPTNI 680

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
           G L  L  L+  NNQIR LP SF  L+ L+ L +  N L V P  I  + +   + +
Sbjct: 681 GELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINF 737



 Score =  111 bits (277), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 153/300 (51%), Gaps = 30/300 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++I   + L  L LS+N++  +P  I  L +L+KL ++ N ++++P+ I  L ++  L
Sbjct: 397 MPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSL 456

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  GN I+  P+ +     + +++L  N +   P  + +L SL  L    N + E+P  I
Sbjct: 457 EFSGNFITDFPIEIKNCKNIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYISEIPVDI 516

Query: 228 G---------------------QCS--SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                                  CS  +L  L +  N+++ +P ++  + +L VL + YN
Sbjct: 517 SFNKQLLHLELNENKLLIFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYN 576

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++  PT + +L +LR LD+S N+++++P  +C    + K+NI NN       P  + +L
Sbjct: 577 KLETFPTEVCALDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN--QFIYFPVELCHL 634

Query: 325 EMLEELDISN---NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + LEEL+IS     ++  LP+    +++L  L +  N +   P NI E+  +++V   AD
Sbjct: 635 QSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNNAIREMPTNIGEL--RSLVSLNAD 692



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 86/283 (30%), Positives = 141/283 (49%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S     R+L L N     IE  P  +  L +L  L+L++N++  VP  +  L +L+ L
Sbjct: 239 EISQLGNIRELFLNNNC---IEDFPSGLESLKNLEILNLAKNKLRHVPDALSSLKNLRAL 295

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  N++   P ++  L  L+ L+L GN I++LP  +  L  LE+L L  N L+ L   I
Sbjct: 296 NLEYNQLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEI 355

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L+ +K+L +  N LE + + I     LR L +D N LK +PE +     LE LS+  N
Sbjct: 356 FLLLRMKELQLTDNKLEVISNKIENFKELRILMLDKNLLKDMPENISHCAVLECLSLSDN 415

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  +  L +LR+L ++ N L  +PE +     +  +    NF  +   P  I N 
Sbjct: 416 KLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNF--ITDFPIEIKNC 473

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + + ++++S N+I   P     L  L  L    N +   P +I
Sbjct: 474 KNIAKVELSYNKIMYFPLGLCALDSLYYLSFTGNYISEIPVDI 516



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/220 (32%), Positives = 126/220 (57%), Gaps = 3/220 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSR-LVRLEELDLGSNNLSSLPD 202
           ++L A  + E P  I  +  + +L L  N+I +   A SR ++ LE L +  N LS+LP 
Sbjct: 156 VNLKARGLQEFPKDILKVQYVKHLYLDENEIKSFKGADSRDMLGLEILSIQKNGLSTLPS 215

Query: 203 SIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
            I  L +LK L V  N +  +P  I Q  ++REL ++ N ++  P  +  +  LE+L++ 
Sbjct: 216 EIQLLHNLKLLNVSYNQISHIPKEISQLGNIRELFLNNNCIEDFPSGLESLKNLEILNLA 275

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N ++ +P  +SSL +LR L++ +N+L   P++LCF   L+ +N+  N   + +LP+ I 
Sbjct: 276 KNKLRHVPDALSSLKNLRALNLEYNQLTIFPKALCFLPKLISLNLTGNL--INSLPKEIK 333

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            L+ LE+L + +N++  L     +L R++ L++ +N LEV
Sbjct: 334 ELKNLEKLLLDHNKLTFLAVEIFLLLRMKELQLTDNKLEV 373



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/198 (31%), Positives = 107/198 (54%), Gaps = 3/198 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P SI  + SL  L L  N++   P  +  L +L+ LDL  N+I  +P  I +L 
Sbjct: 553 NKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCALDNLRVLDLSENQIQTIPSEICNLK 612

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN---LSSLPDSIGSLISLKKLIVETND 219
            +  L++  NQ    PV L  L  LEEL++   N   L+ LP+ + ++  L +L +  N 
Sbjct: 613 GIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNNA 672

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P  IG+  SL  L  D N++++LP +   ++ L+ L++  NN+  LP+ + +L SL
Sbjct: 673 IREMPTNIGELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSL 732

Query: 280 RELDVSFNELESVPESLC 297
           +E++   N L   P  +C
Sbjct: 733 KEINFDDNPLLRPPMEIC 750



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 121/252 (48%), Gaps = 2/252 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L++N++  +   I     L+ L L  N + ++P++I     L  L L  N+++ LP  
Sbjct: 364 LQLTDNKLEVISNKIENFKELRILMLDKNLLKDMPENISHCAVLECLSLSDNKLTELPKN 423

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L +L +  N L  +P+ I  L ++  L    N + + P  I  C ++ ++ + Y
Sbjct: 424 IHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKNCKNIAKVELSY 483

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++   P  +  + +L  LS   N I ++P  +S    L  L+++ N+L    E LC   
Sbjct: 484 NKIMYFPLGLCALDSLYYLSFTGNYISEIPVDISFNKQLLHLELNENKLLIFSEHLCSLI 543

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++G N   +R +P SI N+  L  L +  N++   P     L  LRVL + EN +
Sbjct: 544 NLEYLDLGKN--KIRKIPPSISNMVSLHVLILCYNKLETFPTEVCALDNLRVLDLSENQI 601

Query: 361 EVPPRNIVEMGA 372
           +  P  I  +  
Sbjct: 602 QTIPSEICNLKG 613



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/152 (34%), Positives = 84/152 (55%), Gaps = 6/152 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE---NRIVAVPATIGGLSSL 141
           E+ + KG + LN+ N   +   + P  +  L SL  L++S+    ++  +P  +  ++ L
Sbjct: 607 EICNLKGIQKLNISN---NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKL 663

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
            +LD+  N I E+P +IG+L SLV L+   NQI +LP +   L  L++L+L  NNLS LP
Sbjct: 664 TRLDISNNAIREMPTNIGELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLP 723

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
             I +L SLK++  + N L   P  I +   L
Sbjct: 724 SGIYNLFSLKEINFDDNPLLRPPMEICKGKQL 755



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/164 (29%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL---HANRIIELPDSIG 159
           + I+ +P  I  L  +  L++S N+ +  P  +  L SL++L++   +  ++  LP+ + 
Sbjct: 599 NQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELS 658

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           ++  L  LD+  N I  +P  +  L  L  L+  +N + SLP S  SL +L++L +  N+
Sbjct: 659 NMTKLTRLDISNNAIREMPTNIGELRSLVSLNADNNQIRSLPPSFLSLNALQQLNLSGNN 718

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           L  LP  I    SL+E+  D N L   P  + K   L  ++ RY
Sbjct: 719 LSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA-RY 761



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +E+   +   +LN+       +  LP+ +  ++ L  LD+S N I  +P  IG L SL  
Sbjct: 629 VELCHLQSLEELNISQINGKKLTRLPEELSNMTKLTRLDISNNAIREMPTNIGELRSLVS 688

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           L+   N+I  LP S   L +L  L+L GN +S LP  +  L  L+E++   N
Sbjct: 689 LNADNNQIRSLPPSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDN 740


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|421092564|ref|ZP_15553301.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
 gi|410364664|gb|EKP15680.1| leucine rich repeat protein [Leptospira borgpetersenii str.
            200801926]
          Length = 1608

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 3/221 (1%)

Query: 144  LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
            LD   N+   LPD++    SL  L L G ++  LP ++  L RL ELDL  N L+SLP S
Sbjct: 1219 LDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLPAS 1278

Query: 204  IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
            +GSL  L +L +++N    +P  +    +L+ L V +NR+ +LP+ +G + +L  L+   
Sbjct: 1279 LGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAFYE 1338

Query: 264  NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
            N +  LP ++ +LSSL+ L +S N+    PE +   + L  +++G N   +R+LP  I +
Sbjct: 1339 NQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGEN--PIRSLPEKIDS 1396

Query: 324  LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
            L  L+ LDI N  +  LP+S   L++L  LR++ + L EVP
Sbjct: 1397 LFYLKSLDIENTLVESLPESIEKLTQLETLRLKGSKLKEVP 1437



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 6/243 (2%)

Query: 98   QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            QNK     E LPD++    SL SL L    ++ +P ++G L  L +LDL  N++  LP S
Sbjct: 1223 QNKF----ERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLPAS 1278

Query: 158  IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
            +G L  L  L +  NQ S +P  +  L  L+ L +  N +SSLPD IG+L SL  L    
Sbjct: 1279 LGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAFYE 1338

Query: 218  NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
            N L  LP +I   SSL+ L +  N+    PE +  +  LE L +  N I+ LP  + SL 
Sbjct: 1339 NQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGENPIRSLPEKIDSLF 1398

Query: 278  SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
             L+ LD+    +ES+PES+   T L  + +    + L+ +P  + N+E L ++   + + 
Sbjct: 1399 YLKSLDIENTLVESLPESIEKLTQLETLRLKG--SKLKEVPDFLDNMESLRKITFESEEF 1456

Query: 338  RVL 340
              L
Sbjct: 1457 NKL 1459



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 129/238 (54%), Gaps = 2/238 (0%)

Query: 119  VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
            + LD S+N+   +P  +    SL  L L    ++ELP+S+G+L  L  LDL  N++++LP
Sbjct: 1217 IVLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLP 1276

Query: 179  VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
             +L  L +L  L + SN  S++P+ + SL +LK+L V  N +  LP  IG  +SL +L  
Sbjct: 1277 ASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAF 1336

Query: 239  DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
              N+L +LP ++  + +L+ L +  N     P  +  LS+L  LD+  N + S+PE +  
Sbjct: 1337 YENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGENPIRSLPEKIDS 1396

Query: 299  ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
               L  ++I N   +  +LP SI  L  LE L +  ++++ +PD    +  LR +  +
Sbjct: 1397 LFYLKSLDIENTLVE--SLPESIEKLTQLETLRLKGSKLKEVPDFLDNMESLRKITFE 1452



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 152/332 (45%), Gaps = 65/332 (19%)

Query: 108  LPDSIGKLSSLVSLDLSENRIVAVPATIGGL-----------------------SSLKKL 144
            LP+S+G L  L  LDLS+N++ ++PA++G L                        +LK+L
Sbjct: 1252 LPESMGNLKRLTELDLSQNKLTSLPASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRL 1311

Query: 145  DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
             +  NRI  LPD IG+L SL  L    NQ+ +LP ++  L  L+ L L  N  S  P+ I
Sbjct: 1312 SVCWNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPI 1371

Query: 205  GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
              L +L+ L +  N +  LP  I     L+ L ++   +++LPE++ K+  LE L ++ +
Sbjct: 1372 LHLSNLETLDLGENPIRSLPEKIDSLFYLKSLDIENTLVESLPESIEKLTQLETLRLKGS 1431

Query: 265  NIKQLPTTMSSLSSLRELDV---SFNELESVPE----------SLCF--ATTLVKMNIGN 309
             +K++P  + ++ SLR++      FN+L+   E          S+ F  A T +K     
Sbjct: 1432 KLKEVPDFLDNMESLRKITFESEEFNKLKQWCEFEYKEYMKLKSIKFPEAATKIKWLFSE 1491

Query: 310  NFADLRALPRSIGNLEMLEELDISNNQI--------RVLPDS--FRMLSRLR-------- 351
              AD   L +    L++ E  D  + +          +L D   F + SR+         
Sbjct: 1492 KGADFLKLNQWEVKLKISEIYDRKSEKFASEVYALAAILKDEKFFSIASRMTGDRYINAR 1551

Query: 352  ---------VLRVQENPLEVPPRNIVEMGAQA 374
                      L  Q++P+    R  +E+GA+A
Sbjct: 1552 IPFNQACYYALTGQKDPMLEAIRKAIELGAEA 1583



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 69/263 (26%), Positives = 118/263 (44%), Gaps = 38/263 (14%)

Query: 115  LSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELP--DSIGDLLSLVYLDLRGN 172
             + L  L ++E+  V   + +  L +LKK++LH   + +L   +S   L  ++  ++ G 
Sbjct: 1143 FTKLEELTITES--VKDTSVLAELKNLKKIELHKWNVKDLVILNSCTQLEEVILKNIEGF 1200

Query: 173  QI-----SALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +        L  + +++V    LD   N    LPD++ +  SL  L +   +L ELP ++
Sbjct: 1201 ESDFDCSGLLKESKAKIV----LDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESM 1256

Query: 228  GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            G    L EL +  N+L +LP ++G +  L  L +  N    +P  + SL +L+ L V +N
Sbjct: 1257 GNLKRLTELDLSQNKLTSLPASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWN 1316

Query: 288  ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
             + S                         LP  IGNL  L +L    NQ+  LP S + L
Sbjct: 1317 RISS-------------------------LPDGIGNLTSLTDLAFYENQLFSLPASIQNL 1351

Query: 348  SRLRVLRVQENPLEVPPRNIVEM 370
            S L+ L + +N     P  I+ +
Sbjct: 1352 SSLKRLVLSKNKFSDFPEPILHL 1374


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 142/249 (57%), Gaps = 2/249 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+L+  ++ ++P  IG L +L++L L  N+++ LP  I +L +L +LDL  NQ+  LP  
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L+ LDL  N L++LP  IG L +L+ L    N L  LP  IGQ  +L  L +  
Sbjct: 113 IGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  +P+ +G++  L+ L +  N +  LP  +  L +L+EL++ +N+L ++P+ +    
Sbjct: 173 NRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++  N   L  LPR  G L+ L++L++ NN++ +LP     L  L+ L +  NPL
Sbjct: 233 NLQTLDLHEN--RLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 361 EVPPRNIVE 369
               R  ++
Sbjct: 291 SFKERKRIQ 299



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 2/215 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N++V +P  I  L +L+ LDL  N+++ LP+ IG L +L  L
Sbjct: 63  LPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ L    N L+ LP  IG L +L+ L +  N L  +P  I
Sbjct: 123 DLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LP  +G++  L+ L++++N +  LP  +  L +L+ LD+  N
Sbjct: 183 GQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHEN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            L  +P       +L K+N+ NN   L  LP+ IG
Sbjct: 243 RLTILPREFGQLQSLQKLNLVNN--RLIILPKEIG 275



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 6/235 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L +  L+L G ++++LP  + +L  L EL L  N L +LP  I  L +L+
Sbjct: 38  MDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLE 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L  LP+ IG+  +L+ L +  N+L  LP+ +G++  L++L    N +  LP 
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L  L++S N L +VP+ +     L ++++  N   L  LP  IG L  L+EL+
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGN--QLVTLPNEIGQLRNLQELN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           +  NQ+  LP     L  L+ L + EN L + PR   E G    +Q + +LV  R
Sbjct: 216 LKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPR---EFGQLQSLQKL-NLVNNR 266



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 59/310 (19%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +   +LNL +N+L      +P  IG+L +L  L LS N++V +P  IG L +L++
Sbjct: 158 EIGQLENLENLNLSENRLTT----VPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQE 213

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N+++ LP  IG L +L  LDL  N+++ LP    +L  L++L+L +N L  LP  
Sbjct: 214 LNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKE 273

Query: 204 IGSL------------ISLKK--------------------------------------- 212
           IG L            +S K+                                       
Sbjct: 274 IGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFE 333

Query: 213 LIVETNDLEEL-PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           L +E  D   L P  I +  +L+ L +       LP+ +G++  L+ L++  N +K +P+
Sbjct: 334 LSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPS 393

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L  L++  N LE +P+ +     L K+++  N   L+  P  IG L+ L+ LD
Sbjct: 394 EIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQN--KLKIFPVGIGQLKSLQWLD 451

Query: 332 ISNNQIRVLP 341
           +S N++  LP
Sbjct: 452 LSANELITLP 461



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 79/138 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 368 LPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKL 427

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++   PV + +L  L+ LDL +N L +LP  IG L +L+ L +  N L  L   I
Sbjct: 428 SLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEI 487

Query: 228 GQCSSLRELRVDYNRLKA 245
           GQ  +LREL +  N+L +
Sbjct: 488 GQLENLRELNLSNNQLSS 505



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 87/160 (54%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L+ L L+      LP  IG L +L YL L  N +  +P  + +L  LE L+
Sbjct: 346 PKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALN 405

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L+KL +  N L+  P  IGQ  SL+ L +  N L  LP+ +G
Sbjct: 406 LEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIG 465

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           ++  LE L++  N +  L   +  L +LREL++S N+L S
Sbjct: 466 QLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 21/264 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E    +  + LNL N   + +  LP  IG+L +L  LDL  N     P +      ++KL
Sbjct: 250 EFGQLQSLQKLNLVN---NRLIILPKEIGQLQNLQDLDLLMN-----PLSFKERKRIQKL 301

Query: 145 DLHANRIIELPDSIGDL----------LSLVYLDLRGNQISAL-PVALSRLVRLEELDLG 193
             + N  +      GD           L +  L L     S L P  + +   L+ L L 
Sbjct: 302 FPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLY 361

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
                +LP  IG L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++
Sbjct: 362 DCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQL 421

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L+ LS+  N +K  P  +  L SL+ LD+S NEL ++P+ +         N+  +   
Sbjct: 422 RNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEI--GQLENLENLNLSNNQ 479

Query: 314 LRALPRSIGNLEMLEELDISNNQI 337
           L  L + IG LE L EL++SNNQ+
Sbjct: 480 LTTLSQEIGQLENLRELNLSNNQL 503



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N++   P  IG L
Sbjct: 385 LNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQL 444

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            SL+ LDL AN +I LP  IG L +L  L+L  NQ++ L   + +L  L EL+L +N LS
Sbjct: 445 KSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLS 504

Query: 199 S 199
           S
Sbjct: 505 S 505


>gi|431896988|gb|ELK06252.1| Leucine-rich repeat-containing protein 40 [Pteropus alecto]
          Length = 574

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 91/278 (32%), Positives = 163/278 (58%), Gaps = 6/278 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ L D +  L +L  LD+ +N++ ++P+ I  L +L++L++  N++  LP+ I +L 
Sbjct: 65  NKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLKILPEEITNLR 124

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L L+ N+++ +P    +L  LE+LDL +N L+++P S  SL SL +L + +N L+ 
Sbjct: 125 NLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIPASF-SLSSLVRLNLSSNQLKS 183

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I     L+ L  + N L+ +P  +  + +LE+L +R N ++ LP    S   L+EL
Sbjct: 184 LPAEISGMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLP-EFPSCKLLKEL 242

Query: 283 DVSFNELESV-PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
            V  N++E +  E L   T+++ +++ +N   L+++P  I  L+ LE LD+SNN I  LP
Sbjct: 243 HVGENQIEMLGAEHLKHLTSILVLDLRDN--KLKSVPEEITLLQSLERLDLSNNDISSLP 300

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
            S   L  L+ L ++ NP+    R I+  G Q V++Y+
Sbjct: 301 CSLGKL-HLKFLALEGNPIRTIRREIINKGTQEVLKYL 337



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 138/320 (43%), Gaps = 48/320 (15%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           + +  L+S++ LDL +N++ +VP  I  L SL++LDL  N I  LP S+G L  L +L L
Sbjct: 255 EHLKHLTSILVLDLRDNKLKSVPEEITLLQSLERLDLSNNDISSLPCSLGKL-HLKFLAL 313

Query: 170 RGNQISA--------------------------------------LP----VALSRLVRL 187
            GN I                                        LP    V +  +  L
Sbjct: 314 EGNPIRTIRREIINKGTQEVLKYLRSKIKDNGPNQSDSIMETAMTLPSESRVNIHAITTL 373

Query: 188 EELDLGSNNLSSLPDSIGSLIS---LKKLIVETNDLEELPHTIGQCSSL-RELRVDYNRL 243
           + LD      + +PD +   +    +  +    N+L E+P  I +   +  ++ + +N+L
Sbjct: 374 KILDYSDKQTTLIPDEVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKL 433

Query: 244 KALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLV 303
             +   +  +  L  L +R N +  LP  M SL  L+ +++SFN    +PE L    TL 
Sbjct: 434 SFISVELCVLQKLTFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPEVLYHIPTLE 493

Query: 304 KMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVP 363
            + + NN       P  +  +E L  LD+ NN +  +P        LR L +  NP  VP
Sbjct: 494 TVLVSNNQVG-SVDPEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVP 552

Query: 364 PRNIVEMGAQAVVQYMADLV 383
              I+  G  A+++Y+ D +
Sbjct: 553 RAAILMKGTAAILEYLRDRI 572



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 117/226 (51%), Gaps = 19/226 (8%)

Query: 187 LEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKAL 246
           L +L + +N L SL D +  L +L  L +  N L  LP  I +  +L+ L V +N+LK L
Sbjct: 57  LTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLTSLPSAIRELENLQRLNVSHNKLKIL 116

Query: 247 PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMN 306
           PE +  +  L+ L +++N +  +P     L +L +LD+S N L ++P S   + +LV++N
Sbjct: 117 PEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLTTIPASFSLS-SLVRLN 175

Query: 307 IGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP-- 364
           + +N   L++LP  I  ++ L+ LD ++N +  +P     +  L +L ++ N L   P  
Sbjct: 176 LSSN--QLKSLPAEISGMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEF 233

Query: 365 ------------RNIVEM-GAQAVVQYMADLV-EKRDAKTQPVKQK 396
                        N +EM GA+ +    + LV + RD K + V ++
Sbjct: 234 PSCKLLKELHVGENQIEMLGAEHLKHLTSILVLDLRDNKLKSVPEE 279



 Score = 52.0 bits (123), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 86/186 (46%), Gaps = 31/186 (16%)

Query: 108 LPDSIG---KLSSLVSLDLSENRIVAVPATIGGLSSL-KKLDLHANRIIELPDSIGDLLS 163
           +PD +    K + + S++ S+N +  +P  I  L  +   ++L  N++  +   +  L  
Sbjct: 386 IPDEVFDAVKSNIITSINFSKNELCEIPKRIVELKEMVSDVNLSFNKLSFISVELCVLQK 445

Query: 164 LVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIV-------- 215
           L +LDLR N +S+LP  +  L+RL+ ++L  N    LP+ +  + +L+ ++V        
Sbjct: 446 LTFLDLRNNFLSSLPKEMESLIRLQTINLSFNRFRILPEVLYHIPTLETVLVSNNQVGSV 505

Query: 216 ----------------ETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV---GKIHTL 256
                           + NDL ++P  +G C +LR L +D N  +    A+   G    L
Sbjct: 506 DPEKLKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAILMKGTAAIL 565

Query: 257 EVLSVR 262
           E L  R
Sbjct: 566 EYLRDR 571



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 70/134 (52%), Gaps = 4/134 (2%)

Query: 86  VSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLD 145
           V  K+   D+NL     + + ++   +  L  L  LDL  N + ++P  +  L  L+ ++
Sbjct: 417 VELKEMVSDVNLS---FNKLSFISVELCVLQKLTFLDLRNNFLSSLPKEMESLIRLQTIN 473

Query: 146 LHANRIIELPDSIGDLLSLVYLDLRGNQISAL-PVALSRLVRLEELDLGSNNLSSLPDSI 204
           L  NR   LP+ +  + +L  + +  NQ+ ++ P  L  +  L  LDL +N+L  +P  +
Sbjct: 474 LSFNRFRILPEVLYHIPTLETVLVSNNQVGSVDPEKLKTMENLITLDLQNNDLLQIPPEL 533

Query: 205 GSLISLKKLIVETN 218
           G+ ++L+ L+++ N
Sbjct: 534 GNCVNLRTLLLDGN 547


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 142/249 (57%), Gaps = 2/249 (0%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L+L+  ++ ++P  IG L +L++L L  N+++ LP  I +L +L +LDL  NQ+  LP  
Sbjct: 53  LNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNE 112

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + RL  L+ LDL  N L++LP  IG L +L+ L    N L  LP  IGQ  +L  L +  
Sbjct: 113 IGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSE 172

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           NRL  +P+ +G++  L+ L +  N +  LP  +  L +L+EL++ +N+L ++P+ +    
Sbjct: 173 NRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQ 232

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++  N   L  LPR  G L+ L++L++ NN++ +LP     L  L+ L +  NPL
Sbjct: 233 NLQTLDLHEN--RLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPL 290

Query: 361 EVPPRNIVE 369
               R  ++
Sbjct: 291 SFKERKRIQ 299



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 123/215 (57%), Gaps = 2/215 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N++V +P  I  L +L+ LDL  N+++ LP+ IG L +L  L
Sbjct: 63  LPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL  N+++ LP  + +L  L+ L    N L+ LP  IG L +L+ L +  N L  +P  I
Sbjct: 123 DLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           GQ  +L+EL +  N+L  LP  +G++  L+ L++++N +  LP  +  L +L+ LD+  N
Sbjct: 183 GQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHEN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            L  +P       +L K+N+ NN   L  LP+ IG
Sbjct: 243 RLTILPREFGQLQSLQKLNLVNN--RLIILPKEIG 275



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/235 (31%), Positives = 126/235 (53%), Gaps = 6/235 (2%)

Query: 152 IELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLK 211
           ++L  ++ + L +  L+L G ++++LP  + +L  L EL L  N L +LP  I  L +L+
Sbjct: 38  MDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLE 97

Query: 212 KLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
            L +  N L  LP+ IG+  +L+ L +  N+L  LP+ +G++  L++L    N +  LP 
Sbjct: 98  HLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPK 157

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L  L++S N L +VP+ +     L ++++  N   L  LP  IG L  L+EL+
Sbjct: 158 EIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGN--QLVTLPNEIGQLRNLQELN 215

Query: 332 ISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           +  NQ+  LP     L  L+ L + EN L + PR   E G    +Q + +LV  R
Sbjct: 216 LKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPR---EFGQLQSLQKL-NLVNNR 266



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/310 (28%), Positives = 147/310 (47%), Gaps = 59/310 (19%)

Query: 85  EVSSKKGTRDLNL-QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           E+   +   +LNL +N+L      +P  IG+L +L  L LS N++V +P  IG L +L++
Sbjct: 158 EIGQLENLENLNLSENRLTT----VPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQE 213

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           L+L  N+++ LP  IG L +L  LDL  N+++ LP    +L  L++L+L +N L  LP  
Sbjct: 214 LNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKE 273

Query: 204 IGSL------------ISLKK--------------------------------------- 212
           IG L            +S K+                                       
Sbjct: 274 IGQLQNLQDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFE 333

Query: 213 LIVETNDLEEL-PHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPT 271
           L +E  D   L P  I +  +L+ L +       LP+ +G++  L+ L++  N +K +P+
Sbjct: 334 LSLEYKDFSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPS 393

Query: 272 TMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELD 331
            +  L +L  L++  N LE +P+ +     L K+++  N   L+  P  IG L+ L+ LD
Sbjct: 394 EIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQN--KLKIFPVGIGQLKSLQWLD 451

Query: 332 ISNNQIRVLP 341
           +S N++  LP
Sbjct: 452 LSANELITLP 461



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/138 (39%), Positives = 79/138 (57%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L L  N +  +P+ IG L +L+ L+L AN +  LP  IG L +L  L
Sbjct: 368 LPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKL 427

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            L  N++   PV + +L  L+ LDL +N L +LP  IG L +L+ L +  N L  L   I
Sbjct: 428 SLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEI 487

Query: 228 GQCSSLRELRVDYNRLKA 245
           GQ  +LREL +  N+L +
Sbjct: 488 GQLENLRELNLSNNQLSS 505



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 87/160 (54%)

Query: 132 PATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELD 191
           P  I    +L+ L L+      LP  IG L +L YL L  N +  +P  + +L  LE L+
Sbjct: 346 PKVILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALN 405

Query: 192 LGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVG 251
           L +N L  LP  IG L +L+KL +  N L+  P  IGQ  SL+ L +  N L  LP+ +G
Sbjct: 406 LEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEIG 465

Query: 252 KIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
           ++  LE L++  N +  L   +  L +LREL++S N+L S
Sbjct: 466 QLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLSS 505



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 81/264 (30%), Positives = 126/264 (47%), Gaps = 21/264 (7%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E    +  + LNL N   + +  LP  IG+L +L  LDL  N     P +      ++KL
Sbjct: 250 EFGQLQSLQKLNLVN---NRLIILPKEIGQLQNLQDLDLLMN-----PLSFKERKRIQKL 301

Query: 145 DLHANRIIELPDSIGDL----------LSLVYLDLRGNQISAL-PVALSRLVRLEELDLG 193
             + N  +      GD           L +  L L     S L P  + +   L+ L L 
Sbjct: 302 FPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKDFSHLFPKVILKFRNLQSLHLY 361

Query: 194 SNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKI 253
                +LP  IG L +LK L +  N L+++P  IGQ  +L  L ++ N L+ LP+ +G++
Sbjct: 362 DCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQL 421

Query: 254 HTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFAD 313
             L+ LS+  N +K  P  +  L SL+ LD+S NEL ++P+ +         N+  +   
Sbjct: 422 RNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEI--GQLENLENLNLSNNQ 479

Query: 314 LRALPRSIGNLEMLEELDISNNQI 337
           L  L + IG LE L EL++SNNQ+
Sbjct: 480 LTTLSQEIGQLENLRELNLSNNQL 503



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/121 (40%), Positives = 70/121 (57%), Gaps = 1/121 (0%)

Query: 80  LASLIEVSSKKGT-RDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGL 138
           L  L ++ S+ G  R+L   N   + +E LP  IG+L +L  L L +N++   P  IG L
Sbjct: 385 LNGLKDIPSEIGQLRNLEALNLEANVLEGLPKEIGQLRNLQKLSLHQNKLKIFPVGIGQL 444

Query: 139 SSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLS 198
            SL+ LDL AN +I LP  IG L +L  L+L  NQ++ L   + +L  L EL+L +N LS
Sbjct: 445 KSLQWLDLSANELITLPKEIGQLENLENLNLSNNQLTTLSQEIGQLENLRELNLSNNQLS 504

Query: 199 S 199
           S
Sbjct: 505 S 505


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  132 bits (331), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 98/307 (31%), Positives = 151/307 (49%), Gaps = 47/307 (15%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP+S+   + L  LDL  N++  +P+ I  L SL  L L  NRI  + D +  L++L  L
Sbjct: 194 LPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTML 253

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            LR N+I  L  A+  LV L  LD+  N+L  LPD IG+ ++L  L ++ N+L ++P +I
Sbjct: 254 SLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSI 313

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTM-SSLSSLRELDVSF 286
           G   SL  L + YNRL ++P ++    +++  +V  N I QLP  M +SLS+L  + +S 
Sbjct: 314 GNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSR 373

Query: 287 NELESVPES-------------------------LCFATTLVKMNIGNNFAD-------- 313
           N+  S P                              A  L K+N+  N           
Sbjct: 374 NQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGT 433

Query: 314 -------------LRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
                        L+ LP  I NL+ LE L +SNN ++ +P++   L +LR+L ++EN +
Sbjct: 434 WVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRI 493

Query: 361 EVPPRNI 367
           EV P  I
Sbjct: 494 EVLPHEI 500



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/272 (30%), Positives = 155/272 (56%), Gaps = 7/272 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ L  +IG L +L +LD+S N +  +P  IG   +L  LDL  N ++++PDSIG+L 
Sbjct: 258 NKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSIGNLK 317

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SLV L LR N+++++P++L     ++E ++  N ++ LPD  + SL +L  + +  N   
Sbjct: 318 SLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSRNQFT 377

Query: 222 ELPHTIG--QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             P T G  Q +++  + +++NR+  +P  +  +   L  L+++ N +  LP  + +  +
Sbjct: 378 SYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVN 436

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           + EL+++ N L+ +P+ +     L  + + NN   L+ +P +IGNL  L  LD+  N+I 
Sbjct: 437 MVELNLATNALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIE 494

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           VLP    +L  L+ L +Q N + + PR+I  +
Sbjct: 495 VLPHEIGLLHELQRLILQTNQITMLPRSIGHL 526



 Score =  118 bits (295), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 90/283 (31%), Positives = 146/283 (51%), Gaps = 33/283 (11%)

Query: 103 DNIEWLPDS-IGKLSSLVSLDLSENRIVAVPATIGG---LSSLKKLDLHANRIIELPDSI 158
           + I  LPD  +  LS+L ++ LS N+  + P   GG    +++  ++L  NRI ++P  I
Sbjct: 350 NGITQLPDGMLASLSALTTITLSRNQFTSYPT--GGPAQFTNVYSINLEHNRIDKIPYGI 407

Query: 159 -GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                 L  L+++ N ++ALP+ +   V + EL+L +N L  LPD I +L +L+ LI+  
Sbjct: 408 FSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSN 467

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L+++P+TIG    LR L ++ NR++ LP  +G +H L+ L ++ N I  LP ++  LS
Sbjct: 468 NMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLS 527

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
           +L  L VS N L+ +PE                          IG+LE LE L I+ N  
Sbjct: 528 NLTHLSVSENNLQFLPE-------------------------EIGSLESLENLYINQNPG 562

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +  LP    +   L+ L + + PL   P  I   G   V+Q++
Sbjct: 563 LEKLPFELALCQNLKYLNIDKCPLGTIPPEIQAGGPSLVLQWL 605



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 3/238 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP+++ +   L  L L  N+I  +P  IG L +L+ L L+ N +  LP+S+     L
Sbjct: 145 ITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENSLTSLPESLKHCTQL 204

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDLR N+++ +P  + RL  L  L L  N ++++ D +  L++L  L +  N ++EL 
Sbjct: 205 KVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIKELG 264

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG   +L  L V +N L+ LP+ +G    L  L +++N +  +P ++ +L SL  L +
Sbjct: 265 SAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGL 324

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRS-IGNLEMLEELDISNNQIRVLP 341
            +N L SVP SL    ++ + N+  N   +  LP   + +L  L  + +S NQ    P
Sbjct: 325 RYNRLNSVPISLKNCKSMDEFNVEGN--GITQLPDGMLASLSALTTITLSRNQFTSYP 380



 Score = 98.6 bits (244), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 111/200 (55%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I +      +   L  L++ EN + A+P  +G   ++ +L+L  N + +L
Sbjct: 393 INLEHNRIDKIPY--GIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQKL 450

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I +L +L  L L  N +  +P  +  L +L  LDL  N +  LP  IG L  L++LI
Sbjct: 451 PDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLI 510

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           ++TN +  LP +IG  S+L  L V  N L+ LPE +G + +LE L +  N  +++LP  +
Sbjct: 511 LQTNQITMLPRSIGHLSNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 570

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L+ L++    L ++P
Sbjct: 571 ALCQNLKYLNIDKCPLGTIP 590


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|386766571|ref|NP_001247319.1| scribbled, isoform N [Drosophila melanogaster]
 gi|383292967|gb|AFH06636.1| scribbled, isoform N [Drosophila melanogaster]
          Length = 2554

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/268 (35%), Positives = 145/268 (54%), Gaps = 3/268 (1%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I  LP  I    +LV LD+S N I  +P  I  L SL+  D  +N I +LP    
Sbjct: 67  LSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQSLQVADFSSNPIPKLPSGFS 126

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L +L  L L    ++ LP     L +LE L+L  N L  LP++I  L  LK+L +  N+
Sbjct: 127 QLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKLKRLDLGDNE 186

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           +E+LP  +G    L EL +D+N+L+ LP  +G +  L  L V  N +++LP  +S L SL
Sbjct: 187 IEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSL 246

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV 339
            +LD++ N LE++P+ +   + L  + +  N   L+ L  ++GN E ++EL ++ N +  
Sbjct: 247 TDLDLAQNLLEALPDGIAKLSRLTILKLDQNR--LQRLNDTLGNCENMQELILTENFLSE 304

Query: 340 LPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           LP S   +++L  L V  N LE  P  I
Sbjct: 305 LPASIGQMTKLNNLNVDRNALEYLPLEI 332



 Score =  122 bits (305), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/197 (42%), Positives = 118/197 (59%), Gaps = 1/197 (0%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE LP  +G L  L  L L  N++  +P  +G L+ L  LD+  NR+ ELP+ I 
Sbjct: 182 LGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEIS 241

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L+SL  LDL  N + ALP  +++L RL  L L  N L  L D++G+  ++++LI+  N 
Sbjct: 242 GLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENF 301

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L ELP +IGQ + L  L VD N L+ LP  +G+   L VLS+R N +K+LP  + + + L
Sbjct: 302 LSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVL 361

Query: 280 RELDVSFNELESVPESL 296
             LDVS N+L  +P SL
Sbjct: 362 HVLDVSGNQLLYLPYSL 378



 Score =  117 bits (294), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 93/271 (34%), Positives = 140/271 (51%), Gaps = 2/271 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LP    +L +L  L L++  +  +PA  G L+ L+ L+L  N +  LP++I  L  L
Sbjct: 118 IPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELRENLLKHLPETISQLTKL 177

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+I  LP  L  L  L EL L  N L  LP  +G L  L  L V  N LEELP
Sbjct: 178 KRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELP 237

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
           + I    SL +L +  N L+ALP+ + K+  L +L +  N +++L  T+ +  +++EL +
Sbjct: 238 NEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELIL 297

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N L  +P S+   T L  +N+  N   L  LP  IG    L  L + +N+++ LP   
Sbjct: 298 TENFLSELPASIGQMTKLNNLNVDRNA--LEYLPLEIGQCANLGVLSLRDNKLKKLPPEL 355

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAV 375
              + L VL V  N L   P ++V +  +AV
Sbjct: 356 GNCTVLHVLDVSGNQLLYLPYSLVNLQLKAV 386



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 140/279 (50%), Gaps = 30/279 (10%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP++I +L+ L  LDL +N I  +P  +G L  L +L L  N++  LP  +G L  L
Sbjct: 164 LKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTKL 223

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
            YLD+  N++  LP  +S LV L +LDL  N L +LPD I  L  L  L ++ N L+ L 
Sbjct: 224 TYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLN 283

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            T+G C +++EL +  N L  LP ++G++  L  L+V  N ++ LP  +   ++L  L +
Sbjct: 284 DTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSL 343

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N+                         L+ LP  +GN  +L  LD+S NQ+  LP S 
Sbjct: 344 RDNK-------------------------LKKLPPELGNCTVLHVLDVSGNQLLYLPYSL 378

Query: 345 RMLSRLRVLRVQENP----LEVPPRNIVEMGAQAVVQYM 379
             L +L+ + + EN     L   P    E G Q +  Y+
Sbjct: 379 VNL-QLKAVWLSENQSQPLLTFQPDTDAETGEQVLSCYL 416



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 125/259 (48%), Gaps = 25/259 (9%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LP +  +L  L  L LS+N I  +P  I    +L +LD+  N I ++PD I  L 
Sbjct: 47  NHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIKHLQ 106

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL   D   N I  LP   S+L  L  L L   +L++LP   GSL  L+ L         
Sbjct: 107 SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESL--------- 157

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
                     LRE     N LK LPE + ++  L+ L +  N I+ LP  +  L  L EL
Sbjct: 158 ---------ELRE-----NLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHEL 203

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N+L+ +P  L   T L  +++  N   L  LP  I  L  L +LD++ N +  LPD
Sbjct: 204 WLDHNQLQRLPPELGLLTKLTYLDVSENR--LEELPNEISGLVSLTDLDLAQNLLEALPD 261

Query: 343 SFRMLSRLRVLRVQENPLE 361
               LSRL +L++ +N L+
Sbjct: 262 GIAKLSRLTILKLDQNRLQ 280


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/263 (32%), Positives = 145/263 (55%), Gaps = 2/263 (0%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           LP  IG+L +L  L+L  N++  +   I  L +L++L+L AN++  +   I  L +L  L
Sbjct: 63  LPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVL 122

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           D   NQI+ L   + +L  L+ L L +N L++LP  IG L +L+ L +  N L  LP  I
Sbjct: 123 DFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEI 182

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q  +L+EL +  N+L  LP+ +G++  L+ L++  N +  LP  ++ L +L+EL +S N
Sbjct: 183 AQLKNLQELYLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSEN 242

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +L ++P+ +     L K+ +  N   L  +P  I  L+ L+ L +S NQ + +P  F  L
Sbjct: 243 QLMTLPKEIGQLEKLQKLYLNAN--QLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQL 300

Query: 348 SRLRVLRVQENPLEVPPRNIVEM 370
             L+ L +  N L   P+ I ++
Sbjct: 301 KNLQELNLDANQLTTIPKEIGQL 323



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 87/269 (32%), Positives = 145/269 (53%), Gaps = 9/269 (3%)

Query: 71  DGEKLSLIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVA 130
           D  +L+ I    L E+   K  ++LNL     + +  +   I +L +L  LD   N+I  
Sbjct: 79  DANQLTTI----LKEIEQLKNLQELNLD---ANQLTTILKEIEQLKNLQVLDFGSNQITT 131

Query: 131 VPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEEL 190
           +   IG L +LK L L+ N++  LP  IG L +L  L+L  NQ+  LP  +++L  L+EL
Sbjct: 132 LSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQEL 191

Query: 191 DLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAV 250
            L  N L +LP  IG L  L++L +  N L  LP  I Q  +L+EL +  N+L  LP+ +
Sbjct: 192 YLSENQLMTLPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEI 251

Query: 251 GKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNN 310
           G++  L+ L +  N +  +P  ++ L +L+ L +S+N+ +++P        L ++N+  N
Sbjct: 252 GQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDAN 311

Query: 311 FADLRALPRSIGNLEMLEELDISNNQIRV 339
              L  +P+ IG L+ L+ L + NNQ  +
Sbjct: 312 --QLTTIPKEIGQLQNLQTLYLRNNQFSI 338



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 120/223 (53%), Gaps = 9/223 (4%)

Query: 155 PDSIGDL-------LSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSL 207
           P++  DL       L +  LDL   ++ ALP  + +L  L+EL+L +N L+++   I  L
Sbjct: 34  PEAYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQL 93

Query: 208 ISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIK 267
            +L++L ++ N L  +   I Q  +L+ L    N++  L + +G++  L+VL +  N + 
Sbjct: 94  KNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLT 153

Query: 268 QLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEML 327
            LP  +  L +L+ L++  N+L ++P+ +     L ++ +  N   L  LP+ IG LE L
Sbjct: 154 TLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSEN--QLMTLPKEIGQLEKL 211

Query: 328 EELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           +EL++ NNQ+  LP     L  L+ L + EN L   P+ I ++
Sbjct: 212 QELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQL 254



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 81/156 (51%), Gaps = 2/156 (1%)

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           VE    ++L   +     +R L +   +LKALP+ +G++  L+ L++  N +  +   + 
Sbjct: 32  VEPEAYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIE 91

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
            L +L+EL++  N+L ++ + +     L  ++ G+N   +  L + IG L+ L+ L ++N
Sbjct: 92  QLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSN--QITTLSQEIGQLQNLKVLFLNN 149

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
           NQ+  LP     L  L+ L +  N L   P+ I ++
Sbjct: 150 NQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQL 185


>gi|329664308|ref|NP_001192376.1| leucine-rich repeat and death domain-containing protein 1 [Bos
           taurus]
 gi|296488711|tpg|DAA30824.1| TPA: leucine-rich repeat and death domain-containing protein-like
           [Bos taurus]
          Length = 863

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 147/297 (49%), Gaps = 28/297 (9%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P+ I  L+++ SL+ S N I   P  I    ++ K++L  N+I+  P  +  L SL YL
Sbjct: 436 IPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYL 495

Query: 168 DLRGNQISALPVALS-----------------------RLVRLEELDLGSNNLSSLPDSI 204
            L GN IS +PV +S                        L+ LE LDLG N +  +P SI
Sbjct: 496 SLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSI 555

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
            +++SL  LI+  N LE  P  +    +LR L +  N+++ +P  +  +  ++ L++  N
Sbjct: 556 SNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN 615

Query: 265 NIKQLPTTMSSLSSLRELDVS---FNELESVPESLCFATTLVKMNIGNNFADLRALPRSI 321
                P  +  L SL EL++S     +L  +PE L   T L  ++I NN   +R +P +I
Sbjct: 616 QFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNN--AIREMPTNI 673

Query: 322 GNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQY 378
           G L  L  L+  NNQIR LP SF  L+ L+ L +  N L V P  I  + +   + +
Sbjct: 674 GELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINF 730



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 155/300 (51%), Gaps = 30/300 (10%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P++I   + L  L LS+N++  +P  I  L +L+KL ++ N ++++P+ I  L ++  L
Sbjct: 390 MPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSL 449

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           +  GN I+  P+ +     + +++L  N +   P  + +L SL  L +  N + E+P  I
Sbjct: 450 EFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYLSLNGNYISEIPVDI 509

Query: 228 G---------------------QCS--SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
                                  CS  +L  L +  N+++ +P ++  + +L VL + YN
Sbjct: 510 SFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYN 569

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            ++  PT + +L +LR LD+S N+++++P  +C    + K+NI NN       P  + +L
Sbjct: 570 KLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNN--QFIYFPVELCHL 627

Query: 325 EMLEELDISN---NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
           + LEEL+IS     ++  LP+    +++L+ L +  N +   P NI E+  +++V   AD
Sbjct: 628 QSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGEL--RSLVSLNAD 685



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 142/283 (50%), Gaps = 5/283 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+S     ++L L N     IE  P  +  L +L  L+L++N++  +P  +  L +L+ L
Sbjct: 232 EISQLGNIKELFLNNNC---IEDFPSGLESLKNLEILNLAKNKLRHIPDALSSLKNLRAL 288

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
           +L  NR+   P ++  L  L+ L+L GN I++LP  +  L  LE+L L  N L+ L   I
Sbjct: 289 NLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEIKELKNLEKLLLDHNKLTFLAVEI 348

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L+ +K+L +  N LE + + I     LR L +D N LK +PE +     LE LS+  N
Sbjct: 349 FLLLKMKELQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDN 408

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
            + +LP  +  L +LR+L ++ N L  +PE +     +  +    NF  +   P  I + 
Sbjct: 409 KLTELPKNIHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNF--ITDFPIEIKSC 466

Query: 325 EMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + + ++++S N+I   P     L  L  L +  N +   P +I
Sbjct: 467 KNIAKVELSYNKIMYFPLGLCALDSLHYLSLNGNYISEIPVDI 509



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 107/203 (52%), Gaps = 3/203 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  +P SI  + SL  L L  N++   P  +  L +L+ LDL  N+I  +P  I +L 
Sbjct: 546 NKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLK 605

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNN---LSSLPDSIGSLISLKKLIVETND 219
            +  L++  NQ    PV L  L  LEEL++   N   L+ LP+ + ++  LK L +  N 
Sbjct: 606 GIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNA 665

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           + E+P  IG+  SL  L  D N+++ LP +   ++ L+ L++  NN+  LP+ + +L SL
Sbjct: 666 IREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSL 725

Query: 280 RELDVSFNELESVPESLCFATTL 302
           +E++   N L   P  +C    L
Sbjct: 726 KEINFDDNPLLRPPMEICKGKQL 748



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 124/256 (48%), Gaps = 3/256 (1%)

Query: 121 LDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVA 180
           L L++N++  +   I     L+ L L  N + ++P++I     L  L L  N+++ LP  
Sbjct: 357 LQLTDNKLEVISNKIENFKELRILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKN 416

Query: 181 LSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDY 240
           + +L  L +L +  N L  +P+ I  L ++  L    N + + P  I  C ++ ++ + Y
Sbjct: 417 IHKLKNLRKLHINRNYLVKIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSY 476

Query: 241 NRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFAT 300
           N++   P  +  + +L  LS+  N I ++P  +S    L  L+ + N+L    E LC   
Sbjct: 477 NKIMYFPLGLCALDSLHYLSLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEHLCSLI 536

Query: 301 TLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
            L  +++G N   +R +P SI N+  L  L +  N++   P     L  LRVL + EN +
Sbjct: 537 NLEYLDLGKN--KIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQI 594

Query: 361 EVPPRNIVEM-GAQAV 375
           +  P  I  + G Q +
Sbjct: 595 QTIPSEICNLKGIQKL 610



 Score = 79.0 bits (193), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 143/284 (50%), Gaps = 10/284 (3%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +  LP  I  L +L  L++S N+I  +P  I  L ++K+L L+ N I + P  +  L 
Sbjct: 201 NGLSTLPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLK 260

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L+L  N++  +P ALS L  L  L+L  N L+  P ++  L  L  L +  N +  
Sbjct: 261 NLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINS 320

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  I +  +L +L +D+N+L  L   +  +  ++ L +  N ++ +   + +   LR L
Sbjct: 321 LPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKELRIL 380

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
            +  N L+ +PE++     L  +++ +N   L  LP++I  L+ L +L I+ N +  +P+
Sbjct: 381 ILDKNLLKDMPENISHCAVLECLSLSDN--KLTELPKNIHKLKNLRKLHINRNYLVKIPE 438

Query: 343 SFRMLSRLRVLRVQEN-----PLEVPP-RNI--VEMGAQAVVQY 378
               L+ +  L    N     P+E+   +NI  VE+    ++ +
Sbjct: 439 YISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYF 482



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/152 (34%), Positives = 83/152 (54%), Gaps = 6/152 (3%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSE---NRIVAVPATIGGLSSL 141
           E+ + KG + LN+ N   +   + P  +  L SL  L++S+    ++  +P  +  ++ L
Sbjct: 600 EICNLKGIQKLNISN---NQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKL 656

Query: 142 KKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLP 201
           K LD+  N I E+P +IG+L SLV L+   NQI  LP +   L  L++L+L  NNLS LP
Sbjct: 657 KGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLP 716

Query: 202 DSIGSLISLKKLIVETNDLEELPHTIGQCSSL 233
             I +L SLK++  + N L   P  I +   L
Sbjct: 717 SGIYNLFSLKEINFDDNPLLRPPMEICKGKQL 748



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 47/164 (28%), Positives = 83/164 (50%), Gaps = 4/164 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL---HANRIIELPDSIG 159
           + I+ +P  I  L  +  L++S N+ +  P  +  L SL++L++   +  ++  LP+ + 
Sbjct: 592 NQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELS 651

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
           ++  L  LD+  N I  +P  +  L  L  L+  +N +  LP S  SL +L++L +  N+
Sbjct: 652 NMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNN 711

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           L  LP  I    SL+E+  D N L   P  + K   L  ++ RY
Sbjct: 712 LSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA-RY 754



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 57/112 (50%)

Query: 84  IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKK 143
           +E+   +   +LN+       +  LP+ +  ++ L  LD+S N I  +P  IG L SL  
Sbjct: 622 VELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVS 681

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSN 195
           L+   N+I  LP S   L +L  L+L GN +S LP  +  L  L+E++   N
Sbjct: 682 LNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDN 733


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|432905687|ref|XP_004077467.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Oryzias
           latipes]
          Length = 724

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/307 (33%), Positives = 154/307 (50%), Gaps = 27/307 (8%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN I+ LP  I  L  LV LD+S N +  +P +I    +L+  D   N +  LP +  
Sbjct: 66  LSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPLTRLPATFP 125

Query: 160 DLLSLVYLDLRGNQISALP--------------------VALSRLVRLEELDLGSNNLSS 199
           DL SLV L +    +  LP                     +LS L +LE LDLGSN L  
Sbjct: 126 DLQSLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYSSLSELHKLEGLDLGSNELEE 185

Query: 200 LPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVL 259
           LP SIG+L +LK+L ++ N L ELP T+ +  +L  L V  N+L+ LP+ +G +  L  L
Sbjct: 186 LPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLENLTDL 245

Query: 260 SVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPR 319
            V  N+I+ LP ++  L  L  L V  N L  +PES+    +L ++ +  N   +++LPR
Sbjct: 246 LVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIGSCESLAELILTEN--QIKSLPR 303

Query: 320 SIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           SIG L+ L  L+   NQ+  LP        L V  +++N L   P  +    +QA   ++
Sbjct: 304 SIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAEL----SQATELHV 359

Query: 380 ADLVEKR 386
            D+   R
Sbjct: 360 LDVSGNR 366



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/285 (34%), Positives = 139/285 (48%), Gaps = 22/285 (7%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  + +L  L  L LS+N I  +P  I  L  L  LD+  N + E+P+SI    
Sbjct: 46  NQIRQLPKELFQLLKLRKLTLSDNEIQVLPPEIANLMLLVDLDVSRNDVYEIPESISHCK 105

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIG----------------- 205
           +L   D  GN ++ LP     L  L  L +   +L  LPD  G                 
Sbjct: 106 ALQVADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPDDFGKSPSCCIPTSLASFIYS 165

Query: 206 ---SLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVR 262
               L  L+ L + +N+LEELP +IG  S+L+EL +D N+L  LP  + +I  L  L V 
Sbjct: 166 SLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVS 225

Query: 263 YNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIG 322
            N ++ LP  +  L +L +L VS N +E++PES+     L  + +  N   L  LP SIG
Sbjct: 226 ENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQN--RLNCLPESIG 283

Query: 323 NLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           + E L EL ++ NQI+ LP S   L +L  L    N L   P+ I
Sbjct: 284 SCESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEI 328



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 129/230 (56%), Gaps = 3/230 (1%)

Query: 111 SIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLR 170
           S+ +L  L  LDL  N +  +P +IG LS+LK+L L  N+++ELP ++  + +LV LD+ 
Sbjct: 166 SLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVS 225

Query: 171 GNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQC 230
            N++  LP  L  L  L +L +  N++ +LP+SIG L  L  L V+ N L  LP +IG C
Sbjct: 226 ENKLEGLPQELGGLENLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIGSC 285

Query: 231 SSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELE 290
            SL EL +  N++K+LP ++GK+  L  L+   N +  LP  +    SL    +  N L 
Sbjct: 286 ESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLT 345

Query: 291 SVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +P  L  AT L  +++  N   L  LP S+  L+ L+ L +S NQ + L
Sbjct: 346 RIPAELSQATELHVLDVSGN--RLAYLPLSLTTLQ-LKALWLSENQSQPL 392



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 115/194 (59%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + +E LP SIG LS+L  L L  N++V +PAT+  + +L  LD+  N++  LP  +G L 
Sbjct: 181 NELEELPKSIGNLSNLKELWLDGNQLVELPATLCRIRNLVCLDVSENKLEGLPQELGGLE 240

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           +L  L +  N I ALP ++ +L +L  L +  N L+ LP+SIGS  SL +LI+  N ++ 
Sbjct: 241 NLTDLLVSQNSIEALPESIGKLQKLSILKVDQNRLNCLPESIGSCESLAELILTENQIKS 300

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG+   L  L  D N+L +LP+ +G   +L V  +R N + ++P  +S  + L  L
Sbjct: 301 LPRSIGKLKKLFNLNCDRNQLTSLPKEIGGCCSLNVFCMRDNRLTRIPAELSQATELHVL 360

Query: 283 DVSFNELESVPESL 296
           DVS N L  +P SL
Sbjct: 361 DVSGNRLAYLPLSL 374



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/262 (32%), Positives = 138/262 (52%), Gaps = 6/262 (2%)

Query: 107 WLPDSIGKLS-SLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLV 165
           ++PD I +   SL  L L  N+I  +P  +  L  L+KL L  N I  LP  I +L+ LV
Sbjct: 26  YVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDNEIQVLPPEIANLMLLV 85

Query: 166 YLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
            LD+  N +  +P ++S    L+  D   N L+ LP +   L SL  L +    L+ LP 
Sbjct: 86  DLDVSRNDVYEIPESISHCKALQVADFSGNPLTRLPATFPDLQSLVCLSINDISLQRLPD 145

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
             G+  S     +  +    +  ++ ++H LE L +  N +++LP ++ +LS+L+EL + 
Sbjct: 146 DFGKSPS---CCIPTSLASFIYSSLSELHKLEGLDLGSNELEELPKSIGNLSNLKELWLD 202

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N+L  +P +LC    LV +++  N   L  LP+ +G LE L +L +S N I  LP+S  
Sbjct: 203 GNQLVELPATLCRIRNLVCLDVSEN--KLEGLPQELGGLENLTDLLVSQNSIEALPESIG 260

Query: 346 MLSRLRVLRVQENPLEVPPRNI 367
            L +L +L+V +N L   P +I
Sbjct: 261 KLQKLSILKVDQNRLNCLPESI 282



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/126 (37%), Positives = 69/126 (54%), Gaps = 5/126 (3%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QN+L      LP+SIG   SL  L L+EN+I ++P +IG L  L  L+   N++  LP  
Sbjct: 272 QNRL----NCLPESIGSCESLAELILTENQIKSLPRSIGKLKKLFNLNCDRNQLTSLPKE 327

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG   SL    +R N+++ +P  LS+   L  LD+  N L+ LP S+ +L  LK L +  
Sbjct: 328 IGGCCSLNVFCMRDNRLTRIPAELSQATELHVLDVSGNRLAYLPLSLTTL-QLKALWLSE 386

Query: 218 NDLEEL 223
           N  + L
Sbjct: 387 NQSQPL 392



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 256 LEVLSVRYNNIKQLPTTMSSLS-SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADL 314
           +EV+  R+ ++  +P  +     SL EL +  N++  +P+ L     L K+ + +N  ++
Sbjct: 14  VEVIDYRHRSLLYVPDEIFRYGRSLEELQLDANQIRQLPKELFQLLKLRKLTLSDN--EI 71

Query: 315 RALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL 360
           + LP  I NL +L +LD+S N +  +P+S      L+V     NPL
Sbjct: 72  QVLPPEIANLMLLVDLDVSRNDVYEIPESISHCKALQVADFSGNPL 117


>gi|291239871|ref|XP_002739845.1| PREDICTED: Lap1-like [Saccoglossus kowalevskii]
          Length = 1530

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 86/268 (32%), Positives = 147/268 (54%), Gaps = 3/268 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N+  LPD I  L  L  LD+S+N+   +P+ +  L SLK LD+  N +  LP  I  L 
Sbjct: 43  NNLSALPDKISTLQHLKILDISQNKFDNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLN 102

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  L+   NQI  +P A+ +L  L EL++G+N +++L  SI  L +L+ L+V  N+L+E
Sbjct: 103 QLEKLNASCNQIKTVPDAVYKLKSLTELNVGNNLITTLSYSISQLQNLEILVVSDNNLQE 162

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +P+ +   + L+ L +  N + ++   + K+  L  L V  NN++++P  +  L  L++ 
Sbjct: 163 VPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSCNNLRKIPNDVYQLRKLKKF 222

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+  N++ +V   +     L  + + +N   L  +P  I  L  L ELD+ +N IR+LPD
Sbjct: 223 DMRGNKITTVTSDISKLDQLEILIVSSN--KLHTIPSDIYQLRKLRELDVGSNDIRILPD 280

Query: 343 SFRMLSRLRVLRVQENPLEVPPRNIVEM 370
               L +L +L +  N LE  P +I ++
Sbjct: 281 -ISQLKKLEILNLSCNHLEKIPSSIYKL 307



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 84/258 (32%), Positives = 155/258 (60%), Gaps = 3/258 (1%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  + KL  L  LD+  N I ++   I  L+ L+ L++  N++ ++  +I  L  L  L
Sbjct: 669 VPPVVYKLKGLKKLDIGNNIISSILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRL 728

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
           DL+ N+I++    +S+L  LE LD+  N L  LP S+  L S+K+L V +N++  L   +
Sbjct: 729 DLQHNKITSPLPDVSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDL 788

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
            Q   LR++ + +N++ A+P A+ ++  LE L++  NN+ +L + +S L  L++L++SFN
Sbjct: 789 SQLKQLRKINLSHNQMNAVPAAINQLSQLEDLNMSNNNMTKL-SGISHLKHLKKLNISFN 847

Query: 288 ELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRML 347
           +++ VP SLC    L  +N+ +N  ++  LP +I  L  LEEL++ ++ ++ +P +   L
Sbjct: 848 QVQEVPFSLCKLHQLKVLNVASN--NISTLPENISELHNLEELNLKSSSLQNIPSALGHL 905

Query: 348 SRLRVLRVQENPLEVPPR 365
           S+L+VL +++N L   P+
Sbjct: 906 SKLKVLDIRDNHLGKIPK 923



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/256 (32%), Positives = 145/256 (56%), Gaps = 3/256 (1%)

Query: 110 DSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDL 169
           D   KL  L  L LS+N+I  +P ++  L SLK+LD+  N+I  L   I  L +L  L++
Sbjct: 418 DMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNI 477

Query: 170 RGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQ 229
            GN +  +P ++ +L +L++LD+ SN L+ +   I  L  L+ L+V  N L++LP ++ +
Sbjct: 478 SGNILDEVPASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYK 537

Query: 230 CSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNEL 289
             +L++L ++ N+LK +   + ++  LE L V  NN++ +P  + +L  L+ELD   N++
Sbjct: 538 LGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIPNALYNLRKLKELDARNNKI 597

Query: 290 ESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSR 349
             +   +C    L ++ +  N   L  +P SI  L+ L+E+++ +N +  LP     L++
Sbjct: 598 TYLSAEICQLKQLQRLVVSGNI--LHEIPTSICKLKKLKEINVRSNALTSLPQEISQLTQ 655

Query: 350 LRVLRVQENPL-EVPP 364
           L VL V  N L  VPP
Sbjct: 656 LEVLIVSCNKLPNVPP 671



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 84/270 (31%), Positives = 152/270 (56%), Gaps = 4/270 (1%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           ++I  LPD I +L  L  L+LS N +  +P++I  L+ LK+L++ +N I  +  +I +L 
Sbjct: 273 NDIRILPD-ISQLKKLEILNLSCNHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELR 331

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L++  N++  +P  + +L  L++LD+G+N ++SL   I  L  LK L++  + L+E
Sbjct: 332 SLEMLNVSNNKLHEIPPTVCKLKTLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHSLQE 391

Query: 223 LPHTIGQCSSLRELRVDYNRLKAL-PEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRE 281
           +P ++ Q   L EL V  N ++ +  +   K+  LE L +  N I+++PT++  L SL+E
Sbjct: 392 IPSSVYQLKMLTELDVGKNMIRCISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKE 451

Query: 282 LDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLP 341
           LD+  N++ S+   +     L  +NI  N  D   +P S+  L  L++LD+ +N +  + 
Sbjct: 452 LDMRKNKISSLSADISKLENLEILNISGNILD--EVPASVYQLRKLKKLDMRSNMLTEIS 509

Query: 342 DSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
                L  L +L V  N L+  P ++ ++G
Sbjct: 510 SEISKLEWLEILVVSNNKLQDLPISVYKLG 539



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 100/295 (33%), Positives = 150/295 (50%), Gaps = 28/295 (9%)

Query: 101 LMDN-IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIG 159
           L DN IE +P S+ +L SL  LD+ +N+I ++ A I  L +L+ L++  N + E+P S+ 
Sbjct: 431 LSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEILNISGNILDEVPASVY 490

Query: 160 DLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETND 219
            L  L  LD+R N ++ +   +S+L  LE L + +N L  LP S+  L +LKKL +E N 
Sbjct: 491 QLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNK 550

Query: 220 LEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSL 279
           L+ +   I Q   L  L V  N L+ +P A+  +  L+ L  R N I  L   +  L  L
Sbjct: 551 LKYVSPEIFQLQKLETLIVSGNNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQL 610

Query: 280 RELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE----------- 328
           + L VS N L  +P S+C    L ++N+ +N   L +LP+ I  L  LE           
Sbjct: 611 QRLVVSGNILHEIPTSICKLKKLKEINVRSNA--LTSLPQEISQLTQLEVLIVSCNKLPN 668

Query: 329 ------------ELDISNNQI-RVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEM 370
                       +LDI NN I  +LPD    L++L+VL V  N L+    NI  +
Sbjct: 669 VPPVVYKLKGLKKLDIGNNIISSILPD-IHELNQLQVLNVSYNQLQDVTPNIYRL 722



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/284 (29%), Positives = 159/284 (55%), Gaps = 9/284 (3%)

Query: 90  KGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHAN 149
           KG + L++ N ++ +I  LPD I +L+ L  L++S N++  V   I  L  LK+LDL  N
Sbjct: 677 KGLKKLDIGNNIISSI--LPD-IHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHN 733

Query: 150 RIIE-LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
           +I   LPD +  L  L  LD+  N++  LP +L +L  ++EL++GSN + SL   +  L 
Sbjct: 734 KITSPLPD-VSKLQELEVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQLK 792

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L+K+ +  N +  +P  I Q S L +L +  N +  L   +  +  L+ L++ +N +++
Sbjct: 793 QLRKINLSHNQMNAVPAAINQLSQLEDLNMSNNNMTKL-SGISHLKHLKKLNISFNQVQE 851

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +P ++  L  L+ L+V+ N + ++PE++     L ++N+ +  + L+ +P ++G+L  L+
Sbjct: 852 VPFSLCKLHQLKVLNVASNNISTLPENISELHNLEELNLKS--SSLQNIPSALGHLSKLK 909

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGA 372
            LDI +N +  +P   + L +  V ++  NP+ +   N   M +
Sbjct: 910 VLDIRDNHLGKIPKPVQNLPKCLV-KLDGNPMNLESDNESRMSS 952



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/256 (29%), Positives = 144/256 (56%), Gaps = 2/256 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           +N++ +P+++  L  L  LD   N+I  + A I  L  L++L +  N + E+P SI  L 
Sbjct: 572 NNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLK 631

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L  +++R N +++LP  +S+L +LE L +  N L ++P  +  L  LKKL +  N +  
Sbjct: 632 KLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISS 691

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           +   I + + L+ L V YN+L+ +   + ++  L+ L +++N I      +S L  L  L
Sbjct: 692 ILPDIHELNQLQVLNVSYNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSKLQELEVL 751

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPD 342
           D+S N+L+ +P SL    ++ ++N+G+N  ++ +L   +  L+ L ++++S+NQ+  +P 
Sbjct: 752 DISDNKLQELPPSLYQLKSMKELNVGSN--EIISLSSDLSQLKQLRKINLSHNQMNAVPA 809

Query: 343 SFRMLSRLRVLRVQEN 358
           +   LS+L  L +  N
Sbjct: 810 AINQLSQLEDLNMSNN 825



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 151/282 (53%), Gaps = 12/282 (4%)

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRG 171
           I KL  L  L +S N++  +P ++  L +LKKL++  N++  +   I  L  L  L + G
Sbjct: 512 ISKLEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSG 571

Query: 172 NQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCS 231
           N +  +P AL  L +L+ELD  +N ++ L   I  L  L++L+V  N L E+P +I +  
Sbjct: 572 NNLQGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLK 631

Query: 232 SLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELES 291
            L+E+ V  N L +LP+ + ++  LEVL V  N +  +P  +  L  L++LD+  N + S
Sbjct: 632 KLKEINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNIISS 691

Query: 292 VPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRV-LPDSFRMLSRL 350
           +   +     L  +N+   +  L+ +  +I  L  L+ LD+ +N+I   LPD  + L  L
Sbjct: 692 ILPDIHELNQLQVLNVS--YNQLQDVTPNIYRLRQLKRLDLQHNKITSPLPDVSK-LQEL 748

Query: 351 RVLRVQENPL-EVPP-----RNIVEM--GAQAVVQYMADLVE 384
            VL + +N L E+PP     +++ E+  G+  ++   +DL +
Sbjct: 749 EVLDISDNKLQELPPSLYQLKSMKELNVGSNEIISLSSDLSQ 790



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 88/287 (30%), Positives = 156/287 (54%), Gaps = 8/287 (2%)

Query: 79  KLASL-IEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGG 137
           K++SL  ++S  +    LN+   ++D +   P S+ +L  L  LD+  N +  + + I  
Sbjct: 458 KISSLSADISKLENLEILNISGNILDEV---PASVYQLRKLKKLDMRSNMLTEISSEISK 514

Query: 138 LSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNL 197
           L  L+ L +  N++ +LP S+  L +L  L++ GN++  +   + +L +LE L +  NNL
Sbjct: 515 LEWLEILVVSNNKLQDLPISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNL 574

Query: 198 SSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLE 257
             +P+++ +L  LK+L    N +  L   I Q   L+ L V  N L  +P ++ K+  L+
Sbjct: 575 QGIPNALYNLRKLKELDARNNKITYLSAEICQLKQLQRLVVSGNILHEIPTSICKLKKLK 634

Query: 258 VLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRAL 317
            ++VR N +  LP  +S L+ L  L VS N+L +VP  +     L K++IGNN   + ++
Sbjct: 635 EINVRSNALTSLPQEISQLTQLEVLIVSCNKLPNVPPVVYKLKGLKKLDIGNNI--ISSI 692

Query: 318 PRSIGNLEMLEELDISNNQIR-VLPDSFRMLSRLRVLRVQENPLEVP 363
              I  L  L+ L++S NQ++ V P+ +R L +L+ L +Q N +  P
Sbjct: 693 LPDIHELNQLQVLNVSYNQLQDVTPNIYR-LRQLKRLDLQHNKITSP 738



 Score =  105 bits (263), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 146/286 (51%), Gaps = 26/286 (9%)

Query: 103 DNIEWLPDSIGKLS-----------------------SLVSLDLSENRIVAVPATIGGLS 139
           +++E +P SI KL+                       SL  L++S N++  +P T+  L 
Sbjct: 295 NHLEKIPSSIYKLTCLKELNVQSNSITSISTNISELRSLEMLNVSNNKLHEIPPTVCKLK 354

Query: 140 SLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSS 199
           +LKKLD+  NRI  L   I  L  L  L + G+ +  +P ++ +L  L ELD+G N +  
Sbjct: 355 TLKKLDMGNNRITSLLPEIAQLNQLKSLVISGHSLQEIPSSVYQLKMLTELDVGKNMIRC 414

Query: 200 L-PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEV 258
           +  D    L  L+KL++  N +EE+P ++ Q  SL+EL +  N++ +L   + K+  LE+
Sbjct: 415 ISSDMSNKLDQLEKLVLSDNQIEEIPTSLYQLKSLKELDMRKNKISSLSADISKLENLEI 474

Query: 259 LSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALP 318
           L++  N + ++P ++  L  L++LD+  N L  +   +     L  + + NN   L+ LP
Sbjct: 475 LNISGNILDEVPASVYQLRKLKKLDMRSNMLTEISSEISKLEWLEILVVSNN--KLQDLP 532

Query: 319 RSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPP 364
            S+  L  L++L+I  N+++ +      L +L  L V  N L+  P
Sbjct: 533 ISVYKLGNLKKLEIEGNKLKYVSPEIFQLQKLETLIVSGNNLQGIP 578



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 86/148 (58%), Gaps = 6/148 (4%)

Query: 77  LIKLASLIEVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIG 136
           +I L+S  ++S  K  R +NL +  M+ +   P +I +LS L  L++S N +  +   I 
Sbjct: 781 IISLSS--DLSQLKQLRKINLSHNQMNAV---PAAINQLSQLEDLNMSNNNMTKLSG-IS 834

Query: 137 GLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNN 196
            L  LKKL++  N++ E+P S+  L  L  L++  N IS LP  +S L  LEEL+L S++
Sbjct: 835 HLKHLKKLNISFNQVQEVPFSLCKLHQLKVLNVASNNISTLPENISELHNLEELNLKSSS 894

Query: 197 LSSLPDSIGSLISLKKLIVETNDLEELP 224
           L ++P ++G L  LK L +  N L ++P
Sbjct: 895 LQNIPSALGHLSKLKVLDIRDNHLGKIP 922



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 101/238 (42%), Gaps = 49/238 (20%)

Query: 167 LDLRGNQISALP-VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPH 225
           +DLRG QIS +    L R   L+ L LG NNLS+L                       P 
Sbjct: 14  IDLRGKQISKISFTKLCRFTNLKALYLGKNNLSAL-----------------------PD 50

Query: 226 TIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVS 285
            I     L+ L +  N+   +P  V K+ +L++L V  N++  LP  +S L+ L +L+ S
Sbjct: 51  KISTLQHLKILDISQNKFDNIPSCVLKLKSLKILDVEGNSVTSLPPEISQLNQLEKLNAS 110

Query: 286 FNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFR 345
            N++++VP++                         +  L+ L EL++ NN I  L  S  
Sbjct: 111 CNQIKTVPDA-------------------------VYKLKSLTELNVGNNLITTLSYSIS 145

Query: 346 MLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKRDAKTQPVKQKKSWVEMC 403
            L  L +L V +N L+  P N+  +    ++    + +     +   +KQ  + +  C
Sbjct: 146 QLQNLEILVVSDNNLQEVPNNLYHLNKLKLLDIRGNNISSIATEISKLKQLNTLIVSC 203


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 149/254 (58%), Gaps = 2/254 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           +E+LP + G+L+ L  L+L EN++  +P T+  L+ L++LDL +N   E+P+ +  L  L
Sbjct: 150 LEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGL 209

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
               + GN+++ +P  +  L +L  LD+  NN+  + + I    SL+ L++ +N L++LP
Sbjct: 210 KEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLP 269

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
            TIG    +  L++D N+L  LP++VG + +LE L   +N I+ LP+++  LS++R    
Sbjct: 270 ETIGSLKKVTTLKIDENQLIYLPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAA 329

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
             N L  +P  +     +  + + +N   L  LP  +G+++ L+ +++S+N+++ LP +F
Sbjct: 330 DHNFLTQLPSEIGNWKHVTVLFLHSN--KLEFLPEEMGDMQKLKVINLSDNRLKNLPFTF 387

Query: 345 RMLSRLRVLRVQEN 358
             L +L  + + +N
Sbjct: 388 TKLQQLTAMWLSDN 401



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 107/339 (31%), Positives = 160/339 (47%), Gaps = 28/339 (8%)

Query: 55  RNKVPIMIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDS 111
           RN    ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  
Sbjct: 5   RNLFVRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQ 64

Query: 112 IGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE------------------ 153
           +    SL  L L +N +  +PA+I  L +L++LD+  N I E                  
Sbjct: 65  LFNCQSLHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASV 124

Query: 154 -----LPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLI 208
                LPD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L 
Sbjct: 125 NPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLT 184

Query: 209 SLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQ 268
            L++L + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ 
Sbjct: 185 QLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEV 244

Query: 269 LPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLE 328
           +   +S   SL++L +S N L+ +PE++     +  + I  N   L  LP S+G L  LE
Sbjct: 245 VEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDEN--QLIYLPDSVGGLISLE 302

Query: 329 ELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           ELD S N+I  LP S   LS +R      N L   P  I
Sbjct: 303 ELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEI 341



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/277 (31%), Positives = 149/277 (53%), Gaps = 3/277 (1%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  +  N L+ +P  IG+L  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C SL++L +  N L+ LPE +G +  +  L +  N +  LP ++  L SL ELD 
Sbjct: 247 EGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLISLEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   + +      +NF  L  LP  IGN + +  L + +N++  LP+  
Sbjct: 307 SFNEIETLPSSIGQLSNIRTFAADHNF--LTQLPSEIGNWKHVTVLFLHSNKLEFLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD 381
             + +L+V+ + +N L+  P    ++  Q    +++D
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFTFTKL-QQLTAMWLSD 400



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 65/181 (35%), Positives = 102/181 (56%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYL 167
           +P  IG L  L  LD+S+N I  V   I G  SL+ L L +N + +LP++IG L  +  L
Sbjct: 222 IPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTL 281

Query: 168 DLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTI 227
            +  NQ+  LP ++  L+ LEELD   N + +LP SIG L +++    + N L +LP  I
Sbjct: 282 KIDENQLIYLPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEI 341

Query: 228 GQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFN 287
           G    +  L +  N+L+ LPE +G +  L+V+++  N +K LP T + L  L  + +S N
Sbjct: 342 GNWKHVTVLFLHSNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDN 401

Query: 288 E 288
           +
Sbjct: 402 Q 402



 Score = 91.7 bits (226), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 76/233 (32%), Positives = 114/233 (48%), Gaps = 13/233 (5%)

Query: 41  LTDFLILQLGSIIFRNKVPIMIMCMCCVGQ---DGEKLSLIKLASLIEVSSKKGT-RDLN 96
           LT    L LGS  F  +VP ++  +  + +   DG +L+LI     I      GT + L 
Sbjct: 183 LTQLERLDLGSNEF-TEVPEVLEQLSGLKEFWMDGNRLTLI--PGFI------GTLKQLT 233

Query: 97  LQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPD 156
             +   +NIE + + I    SL  L LS N +  +P TIG L  +  L +  N++I LPD
Sbjct: 234 YLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPD 293

Query: 157 SIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVE 216
           S+G L+SL  LD   N+I  LP ++ +L  +       N L+ LP  IG+   +  L + 
Sbjct: 294 SVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLH 353

Query: 217 TNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQL 269
           +N LE LP  +G    L+ + +  NRLK LP    K+  L  + +  N  K L
Sbjct: 354 SNKLEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       VV+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISK 129


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 152/273 (55%), Gaps = 7/273 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  L  +IG L +L +LD+S N +  +P  IG   +L  LDL  N ++++PDSIG+L 
Sbjct: 171 NKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SLV L +R N++S++P  L     ++E ++  N ++ LPD  + SL  L  + +  N   
Sbjct: 231 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 290

Query: 222 ELPHTIG--QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             P T G  Q +++  + +++NR+  +P  +  +   L  L+++ N +  LP  + +  +
Sbjct: 291 SYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVN 349

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           + EL+++ N L+ +P+ +     L  + + NN   L+ +P +IGNL  L  LD+  N+I 
Sbjct: 350 MVELNLATNALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIE 407

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           VLP    +L  L+ L +Q N + + PR+I  +G
Sbjct: 408 VLPHEIGLLHELQRLILQTNQITMLPRSIGHLG 440



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 159/335 (47%), Gaps = 70/335 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L SL +L L+EN + ++P ++   S LK LDL  N++ E+P  I  L 
Sbjct: 79  NKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLR 138

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   L +LV L  L L  N +  L  +IG+L++L  L V  N LE 
Sbjct: 139 SLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEH 198

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +P+++G + +L  L +RYN +  +P T+ +  S+ E 
Sbjct: 199 LPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEF 258

Query: 283 DVSFNELESVPESLC---------------FA----------TTLVKMNIGNNFAD---- 313
           +V  N +  +P+ +                FA          T +  +N+ +N  D    
Sbjct: 259 NVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPY 318

Query: 314 ------------------LRALPRSIG-----------------------NLEMLEELDI 332
                             L ALP  IG                       NL+ LE L +
Sbjct: 319 GIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILIL 378

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNN ++ +P++   L +LR+L ++EN +EV P  I
Sbjct: 379 SNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEI 413



 Score =  121 bits (303), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 79/332 (23%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            N+L+D    +PDSIG L SLV L +  NR+ +VPAT+    S+ + ++  N I +LPD 
Sbjct: 216 HNELLD----IPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDG 271

Query: 158 IGDLLS-------------------------------------------------LVYLD 168
           +   LS                                                 L  L+
Sbjct: 272 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 331

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           ++ N ++ALP+ +   V + EL+L +N L  LPD I +L +L+ LI+  N L+++P+TIG
Sbjct: 332 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 391

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               LR L ++ NR++ LP  +G +H L+ L ++ N I  LP ++  L +L  L VS N 
Sbjct: 392 NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 451

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRML 347
           L+ +PE                          IG+LE LE L I+ N  +  LP    + 
Sbjct: 452 LQFLPE-------------------------EIGSLESLENLYINQNPGLEKLPFELALC 486

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L+ L + + PL   P  I   G   V+Q++
Sbjct: 487 QNLKYLNIDKCPLSTIPPEIQAGGPSLVLQWL 518



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I +      +   L  L++ EN + A+P  IG   ++ +L+L  N + +L
Sbjct: 306 INLEHNRIDKIPY--GIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 363

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I +L +L  L L  N +  +P  +  L +L  LDL  N +  LP  IG L  L++LI
Sbjct: 364 PDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLI 423

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           ++TN +  LP +IG   +L  L V  N L+ LPE +G + +LE L +  N  +++LP  +
Sbjct: 424 LQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 483

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L+ L++    L ++P
Sbjct: 484 ALCQNLKYLNIDKCPLSTIP 503


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 146/263 (55%), Gaps = 2/263 (0%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           ++ LP+ IG+L +L  LDLS+N+++ +P  I  L +L++L L+ N++   P  I  L SL
Sbjct: 59  LKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSL 118

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             L L  NQ++ LPV + +L  L EL+L +N L ++   I  L +L+KL ++ N L   P
Sbjct: 119 HKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFP 178

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             IG+  +L+ L +  N+L   P+ +GK+  L+ L +  N +      +  L +LR L +
Sbjct: 179 KEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLL 238

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           + N+ + +PE +     L  + + +N    + LP+ IG L+ L+ L +S NQ + +P  F
Sbjct: 239 NNNQFKILPEEIGHLKNLQALYLHDN--QFKILPKEIGQLQNLQVLFLSYNQFKTIPVEF 296

Query: 345 RMLSRLRVLRVQENPLEVPPRNI 367
             L  L++L +  N L   P+ I
Sbjct: 297 GQLKNLKMLSLDANQLTALPKEI 319



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 135/255 (52%), Gaps = 5/255 (1%)

Query: 85  EVSSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKL 144
           E+   K    L L N   + +  LP  IG+L +L  L+L  N++  +   I  L +L+KL
Sbjct: 111 EIEQLKSLHKLYLSN---NQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKL 167

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            L  N++   P  IG L +L  L L  NQ++  P  + +L  L+EL L  N L++    I
Sbjct: 168 YLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEI 227

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
           G L +L+ L++  N  + LP  IG   +L+ L +  N+ K LP+ +G++  L+VL + YN
Sbjct: 228 GQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYN 287

Query: 265 NIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNL 324
             K +P     L +L+ L +  N+L ++P+ +     L  +N+  N   L  +P+ IG L
Sbjct: 288 QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDAN--QLTTIPKEIGQL 345

Query: 325 EMLEELDISNNQIRV 339
           + L+ L + NNQ+ +
Sbjct: 346 QNLQTLYLRNNQLSI 360



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 130/248 (52%), Gaps = 25/248 (10%)

Query: 123 LSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALS 182
           LSE ++ A+P  IG L +L+ LDL  N++I LP  I  L +L  L L  NQ++  P  + 
Sbjct: 54  LSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIE 113

Query: 183 RLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNR 242
           +L  L +L L +N L+ LP  IG L +L++L +  N L+ +   I Q  +L++L +D N+
Sbjct: 114 QLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQ 173

Query: 243 LKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTL 302
           L A P+ +GK+  L+ L +  N +   P  +  L +L+EL +  N+L          TT 
Sbjct: 174 LTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQL----------TTF 223

Query: 303 VKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEV 362
            K                IG L+ L  L ++NNQ ++LP+    L  L+ L + +N  ++
Sbjct: 224 TK---------------EIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKI 268

Query: 363 PPRNIVEM 370
            P+ I ++
Sbjct: 269 LPKEIGQL 276



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/138 (27%), Positives = 67/138 (48%), Gaps = 25/138 (18%)

Query: 233 LRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESV 292
           +R L +   +LKALPE +G++  L++L +  N +  LP  +  L +L+EL +++N+L + 
Sbjct: 49  VRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTT- 107

Query: 293 PESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRV 352
                                    P+ I  L+ L +L +SNNQ+ +LP     L  LR 
Sbjct: 108 ------------------------FPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRE 143

Query: 353 LRVQENPLEVPPRNIVEM 370
           L +  N L+   + I ++
Sbjct: 144 LNLWNNQLKTISKEIEQL 161


>gi|322784971|gb|EFZ11742.1| hypothetical protein SINV_11435 [Solenopsis invicta]
          Length = 580

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/292 (31%), Positives = 152/292 (52%), Gaps = 13/292 (4%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            NKL +    +PD + +L+SL +L L  NR+  V   I  L+ L  L    N+I ELP  
Sbjct: 177 HNKLTE----IPDVVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKELPAG 232

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           IG+L++LV  D+  N +  LPV + + V+L  LD+  N L  LPD+IG+L++L +L +  
Sbjct: 233 IGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLVALTRLGLRY 292

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTM-SS 275
           N L  +P ++  C  + E  V+ N++  LP+ +   +  L  +++  NN    P    + 
Sbjct: 293 NRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSRNNFTSYPAGGPAQ 352

Query: 276 LSSLRELDVSFNELESVPESL-CFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
             +   ++V  N+++ +P  +   +  L K+N+  N   L ALP  IG+   + EL++  
Sbjct: 353 FVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENL--LNALPLDIGSWVTMVELNLGT 410

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEKR 386
           NQ+  LPD  + L  L VL +  N L+  P  +V +    V+    DL E R
Sbjct: 411 NQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVL----DLEENR 458



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 91/306 (29%), Positives = 151/306 (49%), Gaps = 51/306 (16%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I+ LP  IG+L +LV+ D+S N +  +P  IG    L  LD+  N +++LPD+IG+L+
Sbjct: 224 NKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHNELLDLPDTIGNLV 283

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLIS------------- 209
           +L  L LR N+++ +P +L+    ++E  +  N +S LPD + + +S             
Sbjct: 284 ALTRLGLRYNRLTNIPKSLANCRMMDEFSVEGNQVSHLPDGLLASLSCLTTITLSRNNFT 343

Query: 210 ------------------------------------LKKLIVETNDLEELPHTIGQCSSL 233
                                               L KL ++ N L  LP  IG   ++
Sbjct: 344 SYPAGGPAQFVNAYSINVEHNQIDKIPYGIFSRSRNLTKLNMKENLLNALPLDIGSWVTM 403

Query: 234 RELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVP 293
            EL +  N+L  LP+ +  + +LEVL +  N +K++PTTM +L  LR LD+  N ++ +P
Sbjct: 404 VELNLGTNQLMKLPDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDMLP 463

Query: 294 ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVL 353
             +   T L K+ + +N   +  LPRSIG+L+ L  L +  N +  LP+    L  L  L
Sbjct: 464 NDIGLMTELQKLILQSN--QITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLDSLESL 521

Query: 354 RVQENP 359
            + +NP
Sbjct: 522 YLNDNP 527



 Score =  104 bits (260), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/215 (34%), Positives = 115/215 (53%), Gaps = 5/215 (2%)

Query: 141 LKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSL 200
           +K+LDL    I  LP S+ +L  L    L GN++  LP  +  L  LE L L  N L+SL
Sbjct: 101 VKRLDLSKASITILPSSVKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSENALTSL 160

Query: 201 PDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLS 260
           P+++ +L  L+ L +  N L E+P  + + +SL  L + +NRLK + + +  +  L +LS
Sbjct: 161 PNTLDNLKLLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLS 220

Query: 261 VRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRS 320
            R N IK+LP  +  L +L   DVS N LE +P  +     L  +++ +N  +L  LP +
Sbjct: 221 FRENKIKELPAGIGELVNLVTFDVSHNHLEHLPVEIGKCVQLSSLDVQHN--ELLDLPDT 278

Query: 321 IGNLEMLEELDISNNQIRVLPDSF---RMLSRLRV 352
           IGNL  L  L +  N++  +P S    RM+    V
Sbjct: 279 IGNLVALTRLGLRYNRLTNIPKSLANCRMMDEFSV 313



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/283 (29%), Positives = 137/283 (48%), Gaps = 33/283 (11%)

Query: 103 DNIEWLPDSI-GKLSSLVSLDLSENRIVAVPATIGGLSSL---KKLDLHANRIIELPDSI 158
           + +  LPD +   LS L ++ LS N   + PA  GG +       +++  N+I ++P  I
Sbjct: 316 NQVSHLPDGLLASLSCLTTITLSRNNFTSYPA--GGPAQFVNAYSINVEHNQIDKIPYGI 373

Query: 159 -GDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
                +L  L+++ N ++ALP+ +   V + EL+LG+N L  LPD I  L SL+ LI+  
Sbjct: 374 FSRSRNLTKLNMKENLLNALPLDIGSWVTMVELNLGTNQLMKLPDDIQCLQSLEVLILSN 433

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L+ +P T+     LR L ++ NR+  LP  +G +  L+ L ++ N I  LP ++  L 
Sbjct: 434 NLLKRIPTTMVNLHKLRVLDLEENRIDMLPNDIGLMTELQKLILQSNQITVLPRSIGHLK 493

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-Q 336
           +L  L V  N                         +L  LP  +G L+ LE L +++N  
Sbjct: 494 NLTYLSVGEN-------------------------NLSCLPEEVGTLDSLESLYLNDNPN 528

Query: 337 IRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
           +  LP    +   L ++ ++  PL   P  IV  G   VVQ++
Sbjct: 529 LHNLPFELALCKNLGIMSIENCPLSHIPAEIVAGGPSLVVQFL 571



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 108/200 (54%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +N+++  +D I +      +  +L  L++ EN + A+P  IG   ++ +L+L  N++++L
Sbjct: 359 INVEHNQIDKIPY--GIFSRSRNLTKLNMKENLLNALPLDIGSWVTMVELNLGTNQLMKL 416

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I  L SL  L L  N +  +P  +  L +L  LDL  N +  LP+ IG +  L+KLI
Sbjct: 417 PDDIQCLQSLEVLILSNNLLKRIPTTMVNLHKLRVLDLEENRIDMLPNDIGLMTELQKLI 476

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           +++N +  LP +IG   +L  L V  N L  LPE VG + +LE L +  N N+  LP  +
Sbjct: 477 LQSNQITVLPRSIGHLKNLTYLSVGENNLSCLPEEVGTLDSLESLYLNDNPNLHNLPFEL 536

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L  + +    L  +P
Sbjct: 537 ALCKNLGIMSIENCPLSHIP 556



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 95/186 (51%), Gaps = 4/186 (2%)

Query: 87  SSKKGTRDLNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDL 146
           S  +    LN++  L++    LP  IG   ++V L+L  N+++ +P  I  L SL+ L L
Sbjct: 375 SRSRNLTKLNMKENLLN---ALPLDIGSWVTMVELNLGTNQLMKLPDDIQCLQSLEVLIL 431

Query: 147 HANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGS 206
             N +  +P ++ +L  L  LDL  N+I  LP  +  +  L++L L SN ++ LP SIG 
Sbjct: 432 SNNLLKRIPTTMVNLHKLRVLDLEENRIDMLPNDIGLMTELQKLILQSNQITVLPRSIGH 491

Query: 207 LISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN-RLKALPEAVGKIHTLEVLSVRYNN 265
           L +L  L V  N+L  LP  +G   SL  L ++ N  L  LP  +     L ++S+    
Sbjct: 492 LKNLTYLSVGENNLSCLPEEVGTLDSLESLYLNDNPNLHNLPFELALCKNLGIMSIENCP 551

Query: 266 IKQLPT 271
           +  +P 
Sbjct: 552 LSHIPA 557



 Score = 45.4 bits (106), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 65/123 (52%), Gaps = 2/123 (1%)

Query: 266 IKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLE 325
           I  LP+++  L  LRE  +  N+L ++P  + + + L  + +  N   L +LP ++ NL+
Sbjct: 111 ITILPSSVKELKHLREFYLYGNKLVTLPPEIGYLSNLETLALSENA--LTSLPNTLDNLK 168

Query: 326 MLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           +L  LD+ +N++  +PD    L+ L  L ++ N L+    NI  +    ++ +  + +++
Sbjct: 169 LLRVLDLRHNKLTEIPDVVYRLTSLTTLYLRFNRLKYVSDNICNLTRLTMLSFRENKIKE 228

Query: 386 RDA 388
             A
Sbjct: 229 LPA 231


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 TCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.4 bits (93), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


>gi|456891557|gb|EMG02262.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 646

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 127/221 (57%), Gaps = 3/221 (1%)

Query: 144 LDLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS 203
           LD   N+   LPD++    SL  L L G ++  LP ++  L RL ELDL  N L+SLP S
Sbjct: 257 LDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLPAS 316

Query: 204 IGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRY 263
           +GSL  L +L +++N    +P  +    +L+ L V +NR+ +LP+ +G + +L  L+   
Sbjct: 317 LGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAFYE 376

Query: 264 NNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGN 323
           N +  LP ++ +LSSL+ L +S N+    PE +   + L  +++G N   +R+LP  I +
Sbjct: 377 NQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGEN--PIRSLPEKIDS 434

Query: 324 LEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPL-EVP 363
           L  L+ LDI N  +  LP+S   L++L  LR++ + L EVP
Sbjct: 435 LFYLKSLDIENTLVESLPESIEKLTQLETLRLKGSKLKEVP 475



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 126/243 (51%), Gaps = 6/243 (2%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
           QNK     E LPD++    SL SL L    ++ +P ++G L  L +LDL  N++  LP S
Sbjct: 261 QNKF----ERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLPAS 316

Query: 158 IGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVET 217
           +G L  L  L +  NQ S +P  +  L  L+ L +  N +SSLPD IG+L SL  L    
Sbjct: 317 LGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAFYE 376

Query: 218 NDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLS 277
           N L  LP +I   SSL+ L +  N+    PE +  +  LE L +  N I+ LP  + SL 
Sbjct: 377 NQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGENPIRSLPEKIDSLF 436

Query: 278 SLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQI 337
            L+ LD+    +ES+PES+   T L  + +    + L+ +P  + N+E L ++   + + 
Sbjct: 437 YLKSLDIENTLVESLPESIEKLTQLETLRLKG--SKLKEVPDFLDNMESLRKITFESEEF 494

Query: 338 RVL 340
             L
Sbjct: 495 NKL 497



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 129/238 (54%), Gaps = 2/238 (0%)

Query: 119 VSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSLVYLDLRGNQISALP 178
           + LD S+N+   +P  +    SL  L L    ++ELP+S+G+L  L  LDL  N++++LP
Sbjct: 255 IVLDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQNKLTSLP 314

Query: 179 VALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRV 238
            +L  L +L  L + SN  S++P+ + SL +LK+L V  N +  LP  IG  +SL +L  
Sbjct: 315 ASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISSLPDGIGNLTSLTDLAF 374

Query: 239 DYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCF 298
             N+L +LP ++  + +L+ L +  N     P  +  LS+L  LD+  N + S+PE +  
Sbjct: 375 YENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPILHLSNLETLDLGENPIRSLPEKIDS 434

Query: 299 ATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQ 356
              L  ++I N   +  +LP SI  L  LE L +  ++++ +PD    +  LR +  +
Sbjct: 435 LFYLKSLDIENTLVE--SLPESIEKLTQLETLRLKGSKLKEVPDFLDNMESLRKITFE 490



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/332 (27%), Positives = 152/332 (45%), Gaps = 65/332 (19%)

Query: 108 LPDSIGKLSSLVSLDLSENRIVAVPATIGGLS-----------------------SLKKL 144
           LP+S+G L  L  LDLS+N++ ++PA++G L                        +LK+L
Sbjct: 290 LPESMGNLKRLTELDLSQNKLTSLPASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRL 349

Query: 145 DLHANRIIELPDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSI 204
            +  NRI  LPD IG+L SL  L    NQ+ +LP ++  L  L+ L L  N  S  P+ I
Sbjct: 350 SVCWNRISSLPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSKNKFSDFPEPI 409

Query: 205 GSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN 264
             L +L+ L +  N +  LP  I     L+ L ++   +++LPE++ K+  LE L ++ +
Sbjct: 410 LHLSNLETLDLGENPIRSLPEKIDSLFYLKSLDIENTLVESLPESIEKLTQLETLRLKGS 469

Query: 265 NIKQLPTTMSSLSSLRELDV---SFNELESVPE----------SLCF--ATTLVKMNIGN 309
            +K++P  + ++ SLR++      FN+L+   E          S+ F  A T +K     
Sbjct: 470 KLKEVPDFLDNMESLRKITFESEEFNKLKQWCEFEYKEYMKLKSIKFPEAATKIKWLFSE 529

Query: 310 NFADLRALPRSIGNLEMLEELDISNNQI--------RVLPDS--FRMLSRLR-------- 351
             AD   L +    L++ E  D  + +          +L D   F + SR+         
Sbjct: 530 KGADFLKLNQWEVKLKISEIYDRKSEKFASEVYALAAILKDEKFFSIASRMTGDRYINAR 589

Query: 352 ---------VLRVQENPLEVPPRNIVEMGAQA 374
                     L  Q++P+    R  +E+GA+A
Sbjct: 590 IPFNQACYYALTGQKDPMLEAIRKAIELGAEA 621



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 111/249 (44%), Gaps = 36/249 (14%)

Query: 129 VAVPATIGGLSSLKKLDLHANRIIELP--DSIGDLLSLVYLDLRGNQI-----SALPVAL 181
           V   + +  L +LKK++LH   + +L   +S   L  ++  ++ G +        L  + 
Sbjct: 193 VKDTSVLAELKNLKKIELHKWNVKDLVILNSCTQLEEVILKNIEGFESDFDCSGLLKESK 252

Query: 182 SRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIGQCSSLRELRVDYN 241
           +++V    LD   N    LPD++ +  SL  L +   +L ELP ++G    L EL +  N
Sbjct: 253 AKIV----LDFSQNKFERLPDAVTTFQSLTSLSLIGCELLELPESMGNLKRLTELDLSQN 308

Query: 242 RLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNELESVPESLCFATT 301
           +L +LP ++G +  L  L +  N    +P  + SL +L+ L V +N + S          
Sbjct: 309 KLTSLPASLGSLDQLTRLYIDSNQFSTIPEPVLSLKNLKRLSVCWNRISS---------- 358

Query: 302 LVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSFRMLSRLRVLRVQENPLE 361
                          LP  IGNL  L +L    NQ+  LP S + LS L+ L + +N   
Sbjct: 359 ---------------LPDGIGNLTSLTDLAFYENQLFSLPASIQNLSSLKRLVLSKNKFS 403

Query: 362 VPPRNIVEM 370
             P  I+ +
Sbjct: 404 DFPEPILHL 412


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 85/273 (31%), Positives = 152/273 (55%), Gaps = 7/273 (2%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  L  +IG L +L +LD+S N +  +P  IG   +L  LDL  N ++++PDSIG+L 
Sbjct: 285 NKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLK 344

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDS-IGSLISLKKLIVETNDLE 221
           SLV L +R N++S++P  L     ++E ++  N ++ LPD  + SL  L  + +  N   
Sbjct: 345 SLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFA 404

Query: 222 ELPHTIG--QCSSLRELRVDYNRLKALPEAV-GKIHTLEVLSVRYNNIKQLPTTMSSLSS 278
             P T G  Q +++  + +++NR+  +P  +  +   L  L+++ N +  LP  + +  +
Sbjct: 405 SYP-TGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVN 463

Query: 279 LRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIR 338
           + EL+++ N L+ +P+ +     L  + + NN   L+ +P +IGNL  L  LD+  N+I 
Sbjct: 464 MVELNLATNALQKLPDDIMNLQNLEILILSNNM--LKKIPNTIGNLRKLRILDLEENRIE 521

Query: 339 VLPDSFRMLSRLRVLRVQENPLEVPPRNIVEMG 371
           VLP    +L  L+ L +Q N + + PR+I  +G
Sbjct: 522 VLPHEIGLLHELQRLILQTNQITMLPRSIGHLG 554



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/335 (30%), Positives = 159/335 (47%), Gaps = 70/335 (20%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + I  LP  IG L SL +L L+EN + ++P ++   S LK LDL  N++ E+P  I  L 
Sbjct: 193 NKIGQLPPEIGCLVSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLR 252

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
           SL  L LR N+I+A+   L +LV L  L L  N +  L  +IG+L++L  L V  N LE 
Sbjct: 253 SLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEH 312

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP  IG C +L  L + +N L  +P+++G + +L  L +RYN +  +P T+ +  S+ E 
Sbjct: 313 LPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEF 372

Query: 283 DVSFNELESVPESLC---------------FA----------TTLVKMNIGNNFAD---- 313
           +V  N +  +P+ +                FA          T +  +N+ +N  D    
Sbjct: 373 NVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPY 432

Query: 314 ------------------LRALPRSIG-----------------------NLEMLEELDI 332
                             L ALP  IG                       NL+ LE L +
Sbjct: 433 GIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILIL 492

Query: 333 SNNQIRVLPDSFRMLSRLRVLRVQENPLEVPPRNI 367
           SNN ++ +P++   L +LR+L ++EN +EV P  I
Sbjct: 493 SNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEI 527



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 152/332 (45%), Gaps = 79/332 (23%)

Query: 98  QNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDS 157
            N+L+D    +PDSIG L SLV L +  NR+ +VPAT+    S+ + ++  N I +LPD 
Sbjct: 330 HNELLD----IPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDG 385

Query: 158 IGDLLS-------------------------------------------------LVYLD 168
           +   LS                                                 L  L+
Sbjct: 386 MLASLSGLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLN 445

Query: 169 LRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELPHTIG 228
           ++ N ++ALP+ +   V + EL+L +N L  LPD I +L +L+ LI+  N L+++P+TIG
Sbjct: 446 MKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIG 505

Query: 229 QCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDVSFNE 288
               LR L ++ NR++ LP  +G +H L+ L ++ N I  LP ++  L +L  L VS N 
Sbjct: 506 NLRKLRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENN 565

Query: 289 LESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNN-QIRVLPDSFRML 347
           L+ +PE                          IG+LE LE L I+ N  +  LP    + 
Sbjct: 566 LQFLPE-------------------------EIGSLESLENLYINQNPGLEKLPFELALC 600

Query: 348 SRLRVLRVQENPLEVPPRNIVEMGAQAVVQYM 379
             L+ L + + PL   P  I   G   V+Q++
Sbjct: 601 QNLKYLNIDKCPLSTIPPEIQAGGPSLVLQWL 632



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 64/200 (32%), Positives = 110/200 (55%), Gaps = 3/200 (1%)

Query: 95  LNLQNKLMDNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIEL 154
           +NL++  +D I +      +   L  L++ EN + A+P  IG   ++ +L+L  N + +L
Sbjct: 420 INLEHNRIDKIPY--GIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKL 477

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD I +L +L  L L  N +  +P  +  L +L  LDL  N +  LP  IG L  L++LI
Sbjct: 478 PDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDLEENRIEVLPHEIGLLHELQRLI 537

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYN-NIKQLPTTM 273
           ++TN +  LP +IG   +L  L V  N L+ LPE +G + +LE L +  N  +++LP  +
Sbjct: 538 LQTNQITMLPRSIGHLGNLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFEL 597

Query: 274 SSLSSLRELDVSFNELESVP 293
           +   +L+ L++    L ++P
Sbjct: 598 ALCQNLKYLNIDKCPLSTIP 617


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  131 bits (330), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/331 (31%), Positives = 161/331 (48%), Gaps = 29/331 (8%)

Query: 61  MIMCMCCVGQDGEKLSL-IKLASLIEVSSKKGTRDLNLQNKLMD--NIEWLPDSIGKLSS 117
           ++ C C  G++    +L     SL +V  +  T +  L+   +D   IE LP  +    S
Sbjct: 11  LVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQS 70

Query: 118 LVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIE-----------------------L 154
           L  L L +N +  +PA+I  L +L++LD+  N I E                       L
Sbjct: 71  LHKLSLPDNDLTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKL 130

Query: 155 PDSIGDLLSLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLI 214
           PD    LL+L  L L    +  LP    RL +L+ L+L  N L  LP ++  L  L++L 
Sbjct: 131 PDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLD 190

Query: 215 VETNDLEELPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMS 274
           + +N+  E+P  + Q S L+E  +D NRL  +P  +G +  L  L V  NNI+ +   +S
Sbjct: 191 LGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGIS 250

Query: 275 SLSSLRELDVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISN 334
           +  +L++L +S N L+ +PE++     +  + I  N   L  LP SIG L  +EELD S 
Sbjct: 251 ACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDEN--QLMYLPDSIGGLISVEELDCSF 308

Query: 335 NQIRVLPDSFRMLSRLRVLRVQENPL-EVPP 364
           N++  LP S   L+ LR      N L ++PP
Sbjct: 309 NEVEALPSSIGQLTNLRTFAADHNYLQQLPP 339



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/295 (30%), Positives = 160/295 (54%), Gaps = 11/295 (3%)

Query: 105 IEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLLSL 164
           I  LPD   +L +L  L L++  +  +PA  G L+ L+ L+L  N++  LP ++  L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQL 186

Query: 165 VYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEELP 224
             LDL  N+ + +P  L +L  L+E  + +N L+ +P  IGSL  L  L V  N++E + 
Sbjct: 187 ERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVE 246

Query: 225 HTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLRELDV 284
             I  C +L++L +  N L+ LPE +G +  +  L +  N +  LP ++  L S+ ELD 
Sbjct: 247 EGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDC 306

Query: 285 SFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVLPDSF 344
           SFNE+E++P S+   T L      +N+  L+ LP  IG+ + +  L + +N++  LP+  
Sbjct: 307 SFNEVEALPSSIGQLTNLRTFAADHNY--LQQLPPEIGSWKNITVLFLHSNKLETLPEEM 364

Query: 345 RMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMAD--------LVEKRDAKTQ 391
             + +L+V+ + +N L+  P +  ++  Q    +++D        L ++ D++TQ
Sbjct: 365 GDMQKLKVINLSDNRLKNLPFSFTKL-QQLTAMWLSDNQSKPLIPLQKETDSETQ 418



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/238 (33%), Positives = 134/238 (56%), Gaps = 2/238 (0%)

Query: 103 DNIEWLPDSIGKLSSLVSLDLSENRIVAVPATIGGLSSLKKLDLHANRIIELPDSIGDLL 162
           + ++ LP ++ +L+ L  LDL  N    VP  +  LS LK+  + ANR+  +P  IG L 
Sbjct: 171 NQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLK 230

Query: 163 SLVYLDLRGNQISALPVALSRLVRLEELDLGSNNLSSLPDSIGSLISLKKLIVETNDLEE 222
            L YLD+  N I  +   +S    L++L L SN+L  LP++IGSL ++  L ++ N L  
Sbjct: 231 QLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMY 290

Query: 223 LPHTIGQCSSLRELRVDYNRLKALPEAVGKIHTLEVLSVRYNNIKQLPTTMSSLSSLREL 282
           LP +IG   S+ EL   +N ++ALP ++G++  L   +  +N ++QLP  + S  ++  L
Sbjct: 291 LPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVL 350

Query: 283 DVSFNELESVPESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
            +  N+LE++PE +     L  +N+ +N   L+ LP S   L+ L  + +S+NQ + L
Sbjct: 351 FLHSNKLETLPEEMGDMQKLKVINLSDNR--LKNLPFSFTKLQQLTAMWLSDNQSKPL 406



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 282 LDVSFNELESVP-ESLCFATTLVKMNIGNNFADLRALPRSIGNLEMLEELDISNNQIRVL 340
           LD S   LE VP E   F  TL ++ +  N   +  LP+ + N + L +L + +N +  L
Sbjct: 27  LDYSHCSLEQVPKEIFTFEKTLEELYLDAN--QIEELPKQLFNCQSLHKLSLPDNDLTTL 84

Query: 341 PDSFRMLSRLRVLRVQENPLEVPPRNIVEMGAQAVVQYMADLVEK 385
           P S   L  LR L V +N ++  P NI       +V+   + + K
Sbjct: 85  PASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISK 129


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.320    0.137    0.386 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,088,045,119
Number of Sequences: 23463169
Number of extensions: 235928727
Number of successful extensions: 1140302
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10422
Number of HSP's successfully gapped in prelim test: 29815
Number of HSP's that attempted gapping in prelim test: 674217
Number of HSP's gapped (non-prelim): 184592
length of query: 421
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 276
effective length of database: 8,957,035,862
effective search space: 2472141897912
effective search space used: 2472141897912
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 78 (34.7 bits)