BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014627
(421 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q76FS5|SPS2_ARATH Solanesyl diphosphate synthase 2, chloroplastic OS=Arabidopsis
thaliana GN=SPS2 PE=1 SV=1
Length = 417
Score = 599 bits (1545), Expect = e-170, Method: Compositional matrix adjust.
Identities = 301/420 (71%), Positives = 353/420 (84%), Gaps = 7/420 (1%)
Query: 2 MSMTSHNLDFGRSVLDLVACGCSSSAS-IHRSSVRKIAMTGSRKSNRDCGARRLVCCRQN 60
M M+ N+D G SVLD S+S + +S + + M G R C LV R++
Sbjct: 1 MMMSCRNIDLGTSVLDHSCSSSSTSRRFLFGNSSKTVCMIGGRS----C-VGNLVFLRRD 55
Query: 61 LARCRVYSTKTPE-TLLNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNLKS 119
LA CR K+ E +L+N +GQ +LNL+++SR PISL +FEVVA+DLQ LN NL S
Sbjct: 56 LATCRAVPAKSKENSLVNGIGQDQTVMLNLRQESRKPISLETLFEVVADDLQRLNDNLLS 115
Query: 120 IVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIH 179
IVGAENPVL+SAAEQIF AGGKR+RP LVFLVSRATAEL GLKELT +HRRL EIIEMIH
Sbjct: 116 IVGAENPVLISAAEQIFSAGGKRMRPGLVFLVSRATAELAGLKELTVEHRRLGEIIEMIH 175
Query: 180 TASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQ 239
TASLIHDDVLDESDMRRG+ETVH+L+GTRVAVLAGDFMFAQ+SWYLANLENLEVIKLISQ
Sbjct: 176 TASLIHDDVLDESDMRRGRETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLISQ 235
Query: 240 VIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMY 299
VIKDFASGEIKQASSLFDCD++L++Y++KSYYKTASL+AASTKGAAIFS V+ +++QMY
Sbjct: 236 VIKDFASGEIKQASSLFDCDVKLDDYMLKSYYKTASLVAASTKGAAIFSKVESKVAEQMY 295
Query: 300 EYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESE 359
++G+NLGLSFQ+VDDILDFTQS EQLGKPAA+DLAKGN+TAPVIFALE EP+LREIIESE
Sbjct: 296 QFGKNLGLSFQVVDDILDFTQSTEQLGKPAANDLAKGNITAPVIFALENEPRLREIIESE 355
Query: 360 FCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 419
FCE GSL+EAI++V+ GGI++AQELAKEKA LA+ NL+CLPRS FR ALEDMVMFNLER
Sbjct: 356 FCEPGSLEEAIEIVRNRGGIKKAQELAKEKAELALKNLNCLPRSGFRSALEDMVMFNLER 415
>sp|Q8S948|SPS1_ARATH Solanesyl diphosphate synthase 1 OS=Arabidopsis thaliana GN=SPS1
PE=1 SV=1
Length = 406
Score = 585 bits (1508), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/421 (70%), Positives = 341/421 (80%), Gaps = 20/421 (4%)
Query: 2 MSMTSHNLDFGRSVLDLVACGCSSSASIHRSSVRKIAMTGSR--KSNRDCGARRLVCCRQ 59
M + N+D G ++ ACGC R +A T + SNR G
Sbjct: 1 MMTSCRNIDLGTMMM---ACGCG------RRQFPSLAKTVCKFTSSNRSYGGL------- 44
Query: 60 NLARCRVYSTKTPE-TLLNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNLK 118
+ C+ TK+ E +LLN +GQ +LK++S+ PISL +FE+VA DLQTLN NL
Sbjct: 45 -VGSCKAVPTKSKEISLLNGIGQSQTVSFDLKQESKQPISLVTLFELVAVDLQTLNDNLL 103
Query: 119 SIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMI 178
SIVGAENPVL+SAAEQIFGAGGKR+RP LVFLVS ATAEL GLKELTT+HRRLAEIIEMI
Sbjct: 104 SIVGAENPVLISAAEQIFGAGGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEIIEMI 163
Query: 179 HTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLIS 238
HTASLIHDDVLDESDMRRG+ETVH+L+GTRVAVLAGDFMFAQ+SWYLANLENLEVIKLIS
Sbjct: 164 HTASLIHDDVLDESDMRRGKETVHELFGTRVAVLAGDFMFAQASWYLANLENLEVIKLIS 223
Query: 239 QVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQM 298
QVIKDFASGEIKQASSLFDCD +L+EYL+KS+YKTASL+AASTKGAAIFS V+ +++QM
Sbjct: 224 QVIKDFASGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQM 283
Query: 299 YEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIES 358
YE+G+NLGLSFQIVDDILDFTQS EQLGKPA SDLAKGNLTAPVIFALE+EP+LREIIES
Sbjct: 284 YEFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALEREPRLREIIES 343
Query: 359 EFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLE 418
EFCE GSL+EAI+ V GGI+ AQELA+EKA+ AI NL CLPRS FR ALEDMV++NLE
Sbjct: 344 EFCEAGSLEEAIEAVTKGGGIKRAQELAREKADDAIKNLQCLPRSGFRSALEDMVLYNLE 403
Query: 419 R 419
R
Sbjct: 404 R 404
>sp|Q75HZ9|SPS2_ORYSJ Solanesyl-diphosphate synthase 2, chloroplastic OS=Oryza sativa
subsp. japonica GN=SPS2 PE=1 SV=2
Length = 403
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 278/419 (66%), Positives = 326/419 (77%), Gaps = 29/419 (6%)
Query: 4 MTSHNLDFGRSVLDLVACGCSSSASIHRSSVRKIAMTGSRKSNRDCGARRLVCCRQNLAR 63
M+ LDFG+ L +C C R +G R + R RR+ C
Sbjct: 11 MSRKALDFGQ----LASCRC-----------RWAGRSGMRVAPR----RRMPCV------ 45
Query: 64 CRVYSTKTPETLLNEVGQIPPAVLNLKEKSRSP--ISLANIFEVVAEDLQTLNQNLKSIV 121
C V S P L V A+ + + + P IS++++ EVV++DL LN NLKS+V
Sbjct: 46 CFVASPSQPG--LAAVDVPAEAISSARTTTMIPERISVSSLLEVVSDDLLKLNNNLKSLV 103
Query: 122 GAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTA 181
GAENPVL+SAAEQIFGAGGKRLRPALVFLVSRATAEL GL ELTT+H+RLAEIIEMIHTA
Sbjct: 104 GAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATAELAGLLELTTEHQRLAEIIEMIHTA 163
Query: 182 SLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVI 241
SLIHDDV+D+S MRRG+ET+HQLYGTRVAVLAGDFMFAQSSW+LANLEN+EVIKLISQVI
Sbjct: 164 SLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDFMFAQSSWFLANLENIEVIKLISQVI 223
Query: 242 KDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEY 301
KDFASGEIKQAS+LFDCD+ L++YL+KSYYKTASL+A+ST+ AAIFSGV ++ +QMYEY
Sbjct: 224 KDFASGEIKQASTLFDCDVTLDDYLLKSYYKTASLLASSTRSAAIFSGVSTTICEQMYEY 283
Query: 302 GRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFC 361
GRNLGLSFQ+VDDILDFTQSAEQLGKPA SDLAKGNLTAPVIFAL+ EPKLREII+SEF
Sbjct: 284 GRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKGNLTAPVIFALQDEPKLREIIDSEFS 343
Query: 362 ETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 420
E+ SL AI LV SGGI AQELAKEK +LA+ NL CLP+S FR LE++V +NL+R
Sbjct: 344 ESDSLATAIDLVHRSGGIRRAQELAKEKGDLALQNLQCLPKSQFRSTLENVVKYNLQRI 402
>sp|Q0INZ4|SPS3_ORYSJ Probable solanesyl-diphosphate synthase 3, chloroplastic (Fragment)
OS=Oryza sativa subsp. japonica GN=SPS3 PE=3 SV=1
Length = 372
Score = 535 bits (1377), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/324 (79%), Positives = 293/324 (90%)
Query: 97 ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA 156
IS++++ EVVA+DL LN NLKS+VGAENPVL+SAAEQIFGAGGKRLRPALVFLVSRATA
Sbjct: 48 ISVSSLLEVVADDLLKLNNNLKSLVGAENPVLVSAAEQIFGAGGKRLRPALVFLVSRATA 107
Query: 157 ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDF 216
EL GL ELTT+H+RLAEIIEMIHTASLIHDDV+D+S MRRG+ET+HQLYGTRVAVLAGDF
Sbjct: 108 ELAGLLELTTEHQRLAEIIEMIHTASLIHDDVIDDSGMRRGKETIHQLYGTRVAVLAGDF 167
Query: 217 MFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASL 276
MFAQSSW+LANLEN+EVIKLISQVIKDFASGEIKQAS+LFDCD+ L++YL+KSYYKTASL
Sbjct: 168 MFAQSSWFLANLENIEVIKLISQVIKDFASGEIKQASTLFDCDITLDDYLLKSYYKTASL 227
Query: 277 IAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKG 336
IAAST+ AAIFSGV ++ +QMYEYGRNLGLSFQ+VDDILDFTQSAEQLGKPA SDLAKG
Sbjct: 228 IAASTRSAAIFSGVSTAICEQMYEYGRNLGLSFQVVDDILDFTQSAEQLGKPAGSDLAKG 287
Query: 337 NLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHN 396
NLTAPVIFAL+ EP+LREII+SEF ET SL AI+LV SGGI+ A ELA+EK +AI +
Sbjct: 288 NLTAPVIFALQDEPQLREIIDSEFSETNSLATAIELVHRSGGIKRAHELAREKGEIAIQS 347
Query: 397 LHCLPRSPFRVALEDMVMFNLERF 420
L CLPRS FR LE+MV +NLER
Sbjct: 348 LQCLPRSEFRSTLENMVKYNLERI 371
>sp|P72580|PREA_SYNY3 Prenyl transferase OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=preA PE=3 SV=2
Length = 323
Score = 363 bits (933), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 239/324 (73%), Gaps = 3/324 (0%)
Query: 97 ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA 156
IS ++F V +DL+ L NLK +VGA +P+L +AAE +F AGGKR+RPA+V LVSRAT
Sbjct: 2 ISTTSLFAPVDQDLRLLTDNLKRLVGARHPILGAAAEHLFEAGGKRVRPAIVLLVSRAT- 60
Query: 157 ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDF 216
+ +ELT +HRRLAEI EMIHTASL+HDDV+DE+D+RR TV+ L+ RVAVLAGDF
Sbjct: 61 --LLDQELTARHRRLAEITEMIHTASLVHDDVVDEADLRRNVPTVNSLFDNRVAVLAGDF 118
Query: 217 MFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASL 276
+FAQSSWYLANL+NLEV+KL+S+VI+DFA GEI Q+ + FD D +LE YL KSY+KTASL
Sbjct: 119 LFAQSSWYLANLDNLEVVKLLSEVIRDFAEGEILQSINRFDTDTDLETYLEKSYFKTASL 178
Query: 277 IAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKG 336
IA S K A + S + +YEYG++LGL+FQIVDDILDFT E LGKPA SDL G
Sbjct: 179 IANSAKAAGVLSDAPRDVCDHLYEYGKHLGLAFQIVDDILDFTSPTEVLGKPAGSDLISG 238
Query: 337 NLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHN 396
N+TAP +FA+EK P L ++IE EF + G L++A++LV+ GI ++ELA +A LA +
Sbjct: 239 NITAPALFAMEKYPLLGKLIEREFAQAGDLEQALELVEQGDGIRRSRELAANQAQLARQH 298
Query: 397 LHCLPRSPFRVALEDMVMFNLERF 420
L L S R +L ++V + L R
Sbjct: 299 LSVLEMSAPRESLLELVDYVLGRL 322
>sp|Q1XDL8|PREA_PORYE Prenyl transferase OS=Porphyra yezoensis GN=preA PE=3 SV=1
Length = 323
Score = 340 bits (873), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 160/320 (50%), Positives = 237/320 (74%), Gaps = 3/320 (0%)
Query: 101 NIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVG 160
++F V ++L +L +NLK++ G +P+L +AA+ +F AGGKR+RPALVFLV++AT+E
Sbjct: 6 SLFYPVEQELCSLEKNLKAVAGTRHPILYAAAKHLFDAGGKRVRPALVFLVAKATSEK-- 63
Query: 161 LKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQ 220
+++ T +RLAEI E+IHTASL+HDD++DE RRG +TVH L+ T++AVLAGDF+FAQ
Sbjct: 64 -QDINTGQKRLAEITEIIHTASLVHDDIIDECTTRRGVKTVHNLFNTKIAVLAGDFLFAQ 122
Query: 221 SSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAAS 280
SSWYLAN+ENL V+K IS+VI DFA GEI+Q FD + ++ Y+ KS+YKTASLIAAS
Sbjct: 123 SSWYLANIENLAVVKAISKVITDFAEGEIRQGLVHFDPSISIDAYIEKSFYKTASLIAAS 182
Query: 281 TKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTA 340
+GAA+ +G + ++ +Y YG+++GL+FQI+DD+LD T S + LGKPA +DL GNLT+
Sbjct: 183 CRGAAMLNGSNHQINNDLYLYGKHMGLAFQIMDDVLDITGSTKSLGKPAGADLINGNLTS 242
Query: 341 PVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCL 400
P++F+L +E L ++I+ EFC + + + L+K SGGI +A++LAKE+ A+ L L
Sbjct: 243 PLLFSLTQEASLNDLIDREFCNSTDIASTLFLIKRSGGITKAKDLAKEQVQAALSCLQFL 302
Query: 401 PRSPFRVALEDMVMFNLERF 420
P+S +L+++ F + R
Sbjct: 303 PQSTPVSSLKELTHFIITRL 322
>sp|P31171|PREA_CYAPA Prenyl transferase OS=Cyanophora paradoxa GN=preA PE=3 SV=1
Length = 323
Score = 340 bits (871), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 180/323 (55%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 98 SLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAE 157
S+ NI V +L L +NLK +VG+ +P+L +A+E +F A GKR RPA+V L+S+AT E
Sbjct: 3 SITNILAPVENELDLLTKNLKKLVGSGHPILSAASEHLFSASGKRPRPAIVLLISKATME 62
Query: 158 LVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFM 217
+ +T++HRRLAEI E+IHTASL+HDD+LDESD+RRG TVH +GT++A+LAGDF+
Sbjct: 63 N---EIITSRHRRLAEITEIIHTASLVHDDILDESDVRRGIPTVHSDFGTKIAILAGDFL 119
Query: 218 FAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLI 277
FAQSSWYLANLE+LEV+KLIS+VI DFA GEI++ + F DL LEEYL KS+YKTASL+
Sbjct: 120 FAQSSWYLANLESLEVVKLISKVITDFAEGEIRRGLNQFKVDLTLEEYLEKSFYKTASLL 179
Query: 278 AASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGN 337
AAS+K AA+ S VD +++ +Y YGR+LGL+FQIVDDILDFT S E+LGKP+ SDL KGN
Sbjct: 180 AASSKAAALLSHVDLTVANDLYNYGRHLGLAFQIVDDILDFTSSTEELGKPSCSDLKKGN 239
Query: 338 LTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNL 397
LTAPV+FALE+ +L +I+ +F E + +++V+ + IE+ +ELA E A +AI L
Sbjct: 240 LTAPVLFALEQNSELIPLIQRQFSEPKDFEYTLQIVEETKAIEKTRELAMEHAQVAIQCL 299
Query: 398 HCLPRSPFRVALEDMVMFNLERF 420
LP S + AL+ + + LER
Sbjct: 300 ENLPPSSSKEALKLITKYVLERL 322
>sp|P51268|PREA_PORPU Prenyl transferase OS=Porphyra purpurea GN=preA PE=3 SV=1
Length = 323
Score = 333 bits (855), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 156/321 (48%), Positives = 237/321 (73%), Gaps = 3/321 (0%)
Query: 100 ANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELV 159
+++F + ++L ++ NLKS+ G +P+L +AA+ +F AGGKRLRPA+V LV+++T+E
Sbjct: 5 SSLFHPIEKELYSVEHNLKSVAGTRHPILYAAAKHLFEAGGKRLRPAIVLLVAKSTSEQ- 63
Query: 160 GLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFA 219
+E+ RRLAEI E+IHTASL+HDDV+DE RRG++TVH+L+ T++AVLAGDF+FA
Sbjct: 64 --QEIKPGQRRLAEITEIIHTASLVHDDVIDECSTRRGEKTVHKLFNTKIAVLAGDFLFA 121
Query: 220 QSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAA 279
QSSWYLAN+ NLEV+K+I++VI DFA GEI+Q FD + +++Y+ KS+YKTASL+AA
Sbjct: 122 QSSWYLANIGNLEVVKVITKVITDFAEGEIRQGLVHFDPSISIDDYIEKSFYKTASLVAA 181
Query: 280 STKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLT 339
S +GAA+ + ++ + +Y YG+++GL+FQI+DD+LD S + LGKP+ +D GNLT
Sbjct: 182 SCRGAAMLNDLNSQMHNDLYLYGKHMGLAFQIMDDVLDIAGSTKSLGKPSGADFMNGNLT 241
Query: 340 APVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHC 399
AP++FAL +E KL ++I+ EF + + A+ L+K SGGI +A++LAKE+ A+ L
Sbjct: 242 APILFALTQEGKLDQLIQREFSDERDISLALFLIKKSGGITKAKDLAKEQVQAALCCLQF 301
Query: 400 LPRSPFRVALEDMVMFNLERF 420
LP+S +L+++ F + R
Sbjct: 302 LPKSAPVSSLKELTHFIITRL 322
>sp|Q9TLS1|PREA_CYACA Prenyl transferase OS=Cyanidium caldarium GN=preA PE=3 SV=1
Length = 323
Score = 305 bits (781), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 153/315 (48%), Positives = 216/315 (68%), Gaps = 3/315 (0%)
Query: 106 VAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELT 165
V EDL + Q L ++ NP+L +AA+ + K++RPA+V LV++A + K++
Sbjct: 11 VKEDLLNIEQTLNKLIKVNNPILSAAAKHLLIVESKKIRPAIVLLVAKAIDKN---KKIK 67
Query: 166 TKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYL 225
T +RLAE+ E+IHTA+L+HDDV+DES +RRG ++V++ +G ++AV AGDF+FAQSSWYL
Sbjct: 68 TSQQRLAEVTEIIHTATLLHDDVVDESIIRRGTKSVNKTFGNKIAVFAGDFLFAQSSWYL 127
Query: 226 ANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAA 285
AN+ NLEV+K IS+VI D A GE++Q + F+ + +YL KS+ KTASLIAAS K
Sbjct: 128 ANINNLEVVKAISKVITDLAEGELQQNLTQFNTYYSIIKYLEKSFNKTASLIAASCKSCC 187
Query: 286 IFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFA 345
+ S D SL+ + Y YG+NLGL+FQI+DDILD T S+ LGK SDL GNLTAPV+FA
Sbjct: 188 LLSDFDQSLNSKFYNYGKNLGLAFQIIDDILDITSSSTALGKMTTSDLKLGNLTAPVLFA 247
Query: 346 LEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPF 405
L K KL +IIE EFCE + EAI ++K + IEE+ +LA E AI+++ LP S
Sbjct: 248 LTKNSKLFKIIEREFCEKSDISEAINIIKETNAIEESFDLAYEHIEAAINSIKDLPTSSE 307
Query: 406 RVALEDMVMFNLERF 420
+ +L ++ L R+
Sbjct: 308 KDSLIEIAYDLLNRY 322
>sp|Q653T6|SPS1_ORYSJ Solanesyl-diphosphate synthase 1, mitochondrial OS=Oryza sativa
subsp. japonica GN=SPS1 PE=1 SV=1
Length = 430
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 141/359 (39%), Positives = 221/359 (61%), Gaps = 19/359 (5%)
Query: 58 RQNLARCRVYSTKTPETLLNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNL 117
R + CR + + L + Q+ L+ E+ + P FE+VA++L L L
Sbjct: 54 RSKVVGCRGATFVSSRWLHDAQYQVRQDGLSRSEEQQDP------FELVADELSLLANRL 107
Query: 118 KSIVGAENPVLMSAAEQIF--GAGGKRLRPALVFLVSRA------TAELVGL-----KEL 164
+S+V AE P L SAAE F GA GKR RP ++ L++ A + VG+ +L
Sbjct: 108 RSMVAAEVPKLASAAEYFFKVGAEGKRFRPTVLLLMASALKFPLSDSTEVGVLTILANKL 167
Query: 165 TTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWY 224
T+ + +AEI EMIH ASL+HDDVLD++D RRG +++ + G +++VLAGDF+ +++
Sbjct: 168 RTRQQNIAEITEMIHVASLLHDDVLDDADTRRGVSSLNCIMGNKLSVLAGDFLLSRACVA 227
Query: 225 LANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGA 284
LA L N EV+ L++ ++ +GE Q S+ + ++ YL K+YYKTASLI+ S K
Sbjct: 228 LAALGNTEVVSLMATAVEHLVTGETMQISTSREQRRSMDYYLQKTYYKTASLISNSCKAV 287
Query: 285 AIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIF 344
AI +G +S YEYGRNLGL+FQ++DD+LDFT ++ LGK + +D+ G +TAP+++
Sbjct: 288 AILAGHTADVSMLAYEYGRNLGLAFQLIDDVLDFTGTSASLGKGSLTDIRHGIITAPMLY 347
Query: 345 ALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRS 403
A+E+ P+L E+++ F +++ A+ ++ S GIE+ +ELA+E AN AI + LP S
Sbjct: 348 AMEEFPQLHEVVDRGFDNPANVELALDYLQKSRGIEKTKELAREHANRAIKAIEALPDS 406
>sp|Q5HZ00|SPS3_ARATH Solanesyl diphosphate synthase 3, chloroplastic/mitochondrial
OS=Arabidopsis thaliana GN=SPS3 PE=1 SV=1
Length = 422
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 127/314 (40%), Positives = 201/314 (64%), Gaps = 13/314 (4%)
Query: 103 FEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIF--GAGGKRLRPALVFLVS-----RAT 155
F +VA++L L+ L+ +V AE P L SAAE F G GK+ R ++ L++ R
Sbjct: 85 FSLVADELSLLSNKLREMVLAEVPKLASAAEYFFKRGVQGKQFRSTILLLMATALNVRVP 144
Query: 156 AELVG------LKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRV 209
L+G EL + R +AEI EMIH ASL+HDDVLD++D RRG +++ + G ++
Sbjct: 145 EALIGESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSLNVVMGNKM 204
Query: 210 AVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKS 269
+VLAGDF+ +++ LA L+N EV+ L++ ++ +GE + +S + ++ Y+ K+
Sbjct: 205 SVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSSTEQRYSMDYYMQKT 264
Query: 270 YYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPA 329
YYKTASLI+ S K A+ +G ++ +EYGRNLGL+FQ++DDILDFT ++ LGK +
Sbjct: 265 YYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGRNLGLAFQLIDDILDFTGTSASLGKGS 324
Query: 330 ASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEK 389
SD+ G +TAP++FA+E+ P+LRE+++ + ++D A++ + S GI+ A+ELA E
Sbjct: 325 LSDIRHGVITAPILFAMEEFPQLREVVDQVEKDPRNVDIALEYLGKSKGIQRARELAMEH 384
Query: 390 ANLAIHNLHCLPRS 403
ANLA + LP +
Sbjct: 385 ANLAAAAIGSLPET 398
>sp|Q54VJ9|DPS1_DICDI Decaprenyl-diphosphate synthase OS=Dictyostelium discoideum GN=coq1
PE=3 SV=1
Length = 456
Score = 230 bits (587), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 129/320 (40%), Positives = 194/320 (60%), Gaps = 22/320 (6%)
Query: 102 IFEVVAEDLQTLNQN-LKSIVGA--------------ENPVLMSAAEQIFGAGGKRLRPA 146
IF+VV DL + N +K+I +P+L S + F GKR+RP
Sbjct: 129 IFKVVENDLSNMTHNIMKTITDGVSANSTYSPSPSKKTHPILSSISSYYFELKGKRIRPT 188
Query: 147 LVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYG 206
+V L+S+A + V +L +LAEI+EMIHTASL+HDDV+DE+ RR +++ Y
Sbjct: 189 IVLLLSKALSSTVHGSQL-----KLAEIVEMIHTASLVHDDVIDEASTRRDVISINHSYT 243
Query: 207 TRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYL 266
++A+L GD++ A++S L+ + N +V + +S + + GE QA S + + + YL
Sbjct: 244 NKLAILCGDYLLARASVVLSTIRNPDVTECMSTALAELVEGEFMQAKS--NGVVSFDNYL 301
Query: 267 IKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLG 326
K+Y KT SLI S + AAI SG D ++ E+G+NLGL+FQIVDD+LD+T SAE+ G
Sbjct: 302 QKTYLKTGSLITNSCRSAAILSGADSNIINISTEFGKNLGLAFQIVDDLLDYTGSAEECG 361
Query: 327 KPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELA 386
K + DL G TAPV++A ++ P+L ++I+ +F E G ++EA +LV S GIE+ + LA
Sbjct: 362 KATSVDLTLGLATAPVLYATQEFPQLEKLIKRKFSEIGDVEEAKRLVALSKGIEKTRNLA 421
Query: 387 KEKANLAIHNLHCLPRSPFR 406
E N AI +L LP+S R
Sbjct: 422 IEYCNRAIQSLLKLPQSESR 441
>sp|Q6CBH3|COQ1_YARLI Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=COQ1
PE=3 SV=1
Length = 452
Score = 215 bits (547), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 112/259 (43%), Positives = 165/259 (63%), Gaps = 6/259 (2%)
Query: 167 KHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLA 226
K RRLAEI+EMIHTASL+HDDV+D S RRG T + +G ++A+LAGDF+ ++S +A
Sbjct: 192 KQRRLAEIVEMIHTASLLHDDVIDNSATRRGSPTGNVAFGNKMAILAGDFLLGRASVAIA 251
Query: 227 NLENLEVIKLISQVIKDFASGEIKQASSLFDCDLEL------EEYLIKSYYKTASLIAAS 280
L N EVI+L+S I + GE Q + + E+ E Y+ K+Y KTASL++ S
Sbjct: 252 RLRNAEVIELLSTTIANLVEGEFMQLKNTIVDNSEIANKATFEYYIHKTYLKTASLMSKS 311
Query: 281 TKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTA 340
+ AA+ SG + Y++G+NLGL FQ+VDD+LD+++ LGKPA +DL G TA
Sbjct: 312 CRAAAVLSGARNPIVDASYKFGKNLGLCFQVVDDMLDYSEGESHLGKPAGADLKLGLATA 371
Query: 341 PVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCL 400
PV+FA EK P+L ++I+ +F G ++ A LV+ + G+ +ELA++ + A+ NL L
Sbjct: 372 PVLFAWEKYPELGDMIKRKFDGPGDVERARFLVQQADGLSRTRELAQKYCDEAVANLDLL 431
Query: 401 PRSPFRVALEDMVMFNLER 419
P S R AL ++ M + R
Sbjct: 432 PYSESREALRNLTMKMMNR 450
>sp|Q7S565|COQ1_NEUCR Probable hexaprenyl pyrophosphate synthase, mitochondrial
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=NCU02305 PE=3 SV=1
Length = 449
Score = 215 bits (547), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 129/364 (35%), Positives = 199/364 (54%), Gaps = 47/364 (12%)
Query: 103 FEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA------ 156
+VA +++ L N++ ++G+ +P L AA+ A GK +RP +V L+SRATA
Sbjct: 84 LRLVAGEMKFLTGNIRKLLGSGHPSLDRAAKYYTQAEGKHVRPLIVLLMSRATALCPKAP 143
Query: 157 ----------------------------------ELVGLKELTTKHRRLAEIIEMIHTAS 182
+ ++ RRLAEI E+IHTAS
Sbjct: 144 QRQQSTLQASAAIDTSISPLNILSDFNPSDATPVSIPADTDILPSQRRLAEITELIHTAS 203
Query: 183 LIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIK 242
L+HDDV+D S+ RRG + + +G ++AVLAGDF+ ++S LA L + EV++L++ VI
Sbjct: 204 LLHDDVIDHSESRRGAPSANLEFGNKMAVLAGDFLLGRASVALARLRHAEVVELLATVIA 263
Query: 243 DFASGEIKQASSLFD-------CDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLS 295
+ GE Q + + L YL K+Y KTASLI+ S + +A+ G D +
Sbjct: 264 NLVEGEFMQLKNTARDEKNPKWSEETLTYYLQKTYLKTASLISKSCRASALLGGADAATV 323
Query: 296 KQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREI 355
Y YG+NLGL+FQ+VDD+LD+T+S ++LGKPA +DL G TAP++FA + P+L +
Sbjct: 324 DAAYLYGKNLGLAFQLVDDMLDYTRSEKELGKPAGADLELGLATAPLLFAWKTMPELGPL 383
Query: 356 IESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMF 415
+ +F + G A +LV S GIE+ + LA++ A AI + P S + L +M +
Sbjct: 384 VGRKFEKEGDAARARELVLQSNGIEQTRALAQDYAEKAIEAISGFPDSEAKDGLIEMAVK 443
Query: 416 NLER 419
L+R
Sbjct: 444 TLKR 447
>sp|Q33DR2|DPS1_MOUSE Decaprenyl-diphosphate synthase subunit 1 OS=Mus musculus GN=Pdss1
PE=1 SV=1
Length = 409
Score = 210 bits (535), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/335 (34%), Positives = 198/335 (59%), Gaps = 2/335 (0%)
Query: 76 LNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQI 135
+++ Q PA+ + ++ ++S ++ F++ DL+ L ++++ + L +E
Sbjct: 64 ISQFHQRTPAMCSCRQ-TQSGEKYSDPFKLGWRDLKGLYEDIRKELHISTRELKDMSEYY 122
Query: 136 FGAGGKRLRPALVFLVSRA-TAELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDM 194
F GK RP +V L++RA +E+ R +A + EMIHTA+L+HDDV+D++
Sbjct: 123 FDGKGKAFRPIIVVLMARACNIHHNNAREMQASQRSIALVAEMIHTATLVHDDVIDDASS 182
Query: 195 RRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASS 254
RRG+ TV++++G + AVLAGD + + +S LA + N V+ +++QVI+D GE Q S
Sbjct: 183 RRGKHTVNKIWGEKKAVLAGDLILSAASVALARIGNTAVVSMLAQVIEDLVRGEFLQLGS 242
Query: 255 LFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDD 314
+ + YL K++ KTASLIA S K ++ D + + Y+YG+N+G++FQ++DD
Sbjct: 243 KENENERFAHYLEKTFKKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDD 302
Query: 315 ILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVK 374
+LDFT ++Q+GKP ++DL G T PV+FA ++ P++ +I F G +D A + V
Sbjct: 303 VLDFTSCSDQMGKPTSADLKLGIATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVL 362
Query: 375 TSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVAL 409
S G+++ LA++ + A+ + L S R AL
Sbjct: 363 QSDGVQQTTYLAQQYCHKAVREIRKLRPSTERDAL 397
>sp|Q5T2R2|DPS1_HUMAN Decaprenyl-diphosphate synthase subunit 1 OS=Homo sapiens GN=PDSS1
PE=1 SV=1
Length = 415
Score = 209 bits (532), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 116/319 (36%), Positives = 187/319 (58%), Gaps = 1/319 (0%)
Query: 92 KSRSPISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLV 151
K+ S + F++ DL+ L ++++ + L +E F GK RP +V L+
Sbjct: 85 KTHSGEKYTDPFKLGWRDLKGLYEDIRKELLISTSELKEMSEYYFDGKGKAFRPIIVALM 144
Query: 152 SRA-TAELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVA 210
+RA + + R +A I EMIHTASL+HDDV+D++ RRG+ TV++++G + A
Sbjct: 145 ARACNIHHNNSRHVQASQRAIALIAEMIHTASLVHDDVIDDASSRRGKHTVNKIWGEKKA 204
Query: 211 VLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSY 270
VLAGD + + +S LA + N VI +++QVI+D GE Q S + + YL K++
Sbjct: 205 VLAGDLILSAASIALARIGNTTVISILTQVIEDLVRGEFLQLGSKENENERFAHYLEKTF 264
Query: 271 YKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAA 330
KTASLIA S K ++ D + + Y+YG+N+G++FQ++DD+LDFT ++Q+GKP +
Sbjct: 265 KKTASLIANSCKAVSVLGCPDPVVHEIAYQYGKNVGIAFQLIDDVLDFTSCSDQMGKPTS 324
Query: 331 SDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKA 390
+DL G T PV+FA ++ P++ +I F G +D A + V S G+++ LA++
Sbjct: 325 ADLKLGLATGPVLFACQQFPEMNAMIMRRFSLPGDVDRARQYVLQSDGVQQTTYLAQQYC 384
Query: 391 NLAIHNLHCLPRSPFRVAL 409
+ AI + L SP R AL
Sbjct: 385 HEAIREISKLRPSPERDAL 403
>sp|O43091|DPS1_SCHPO Decaprenyl-diphosphate synthase subunit 1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=dps1 PE=1 SV=1
Length = 378
Score = 200 bits (508), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 123/360 (34%), Positives = 199/360 (55%), Gaps = 32/360 (8%)
Query: 76 LNEVGQIPPAVLNLKEKSRSPISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQI 135
L +G++ VL +R N ++ +L+ ++ ++ ++ + + L ++
Sbjct: 13 LWSLGKVRSTVLRFSTTNR------NASHLIKNELEQISPGIRQMLNSNSEFLEECSKYY 66
Query: 136 FGAGGKRLRPALVFLVSRATA-------ELVGLK-------------ELTTKHRRLAEII 175
A GK++RP+LV L+S+AT+ +VG K ++ RLA+I
Sbjct: 67 TIAQGKQMRPSLVLLMSKATSLCHGIDRSVVGDKYIDDDDLRSFSTGQILPSQLRLAQIT 126
Query: 176 EMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIK 235
EMIH ASL+HDDV+D +++RRG + + +G R ++LAG+F+ A++S +A L N +V +
Sbjct: 127 EMIHIASLLHDDVIDHANVRRGSPSSNVAFGNRRSILAGNFILARASTAMARLRNPQVTE 186
Query: 236 LISQVIKDFASGEIKQASSLFD-CDLELEE-----YLIKSYYKTASLIAASTKGAAIFSG 289
L++ VI D GE Q + D LE+++ Y+ KS+ KTASLI+ S K + I
Sbjct: 187 LLATVIADLVRGEFLQLKNTMDPSSLEIKQSNFDYYIEKSFLKTASLISKSCKASTILGQ 246
Query: 290 VDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKE 349
+++ EYGR +G +FQ++DD+LD+T + LGK A +DL G TAPV+FA +K
Sbjct: 247 CSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTLGKAAGADLKLGLATAPVLFAWKKY 306
Query: 350 PKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVAL 409
P+L +I + F + A LV+ + IE+ AKE A +L CLP SP R AL
Sbjct: 307 PELGAMIVNRFNHPSDIQRARSLVECTDAIEQTITWAKEYIKKAKDSLLCLPDSPARKAL 366
>sp|P55785|HEPS2_GEOSE Heptaprenyl diphosphate synthase component 2 OS=Geobacillus
stearothermophilus GN=hepT PE=3 SV=1
Length = 320
Score = 198 bits (504), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 117/321 (36%), Positives = 187/321 (58%), Gaps = 9/321 (2%)
Query: 97 ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA 156
+ L ++ +++DL + + L+ V +E L AA + AGGKR+RP V L +R
Sbjct: 1 MKLKAMYSFLSDDLAAVEEELERAVQSEYGPLGEAALHLLQAGGKRIRPVFVLLAAR--- 57
Query: 157 ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDF 216
G +L + + +A +E+IH ASL+HDDV+D++D+RRG+ T+ + R A+ GD+
Sbjct: 58 --FGQYDLE-RMKHVAVALELIHMASLVHDDVIDDADLRRGRPTIKAKWSNRFAMYTGDY 114
Query: 217 MFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASL 276
+FA+S +A L N +++++ I + GEI+Q + D L YL + KTA L
Sbjct: 115 LFARSLERMAELGNPRAHQVLAKTIVEVCRGEIEQIKDKYRFDQPLRTYLRRIRRKTALL 174
Query: 277 IAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKG 336
IAAS + A+ +G + K++Y +G +G+SFQI DDILDFT + EQLGKPA SDL +G
Sbjct: 175 IAASCQLGALAAGAPEPIVKRLYWFGHYVGMSFQITDDILDFTGTEEQLGKPAGSDLLQG 234
Query: 337 NLTAPVIFALEKEPKLREIIESEFCETGSLDEA--IKLVKTSGGIEEAQELAKEKANLAI 394
N+T PV++AL E +++ I + ET + A I +K + IE + L+ + A+
Sbjct: 235 NVTLPVLYALSDE-RVKAAIAAVGPETDVAEMAAVISAIKRTDAIERSYALSDRYLDKAL 293
Query: 395 HNLHCLPRSPFRVALEDMVMF 415
H L LP + R L D+ ++
Sbjct: 294 HLLDGLPMNEARGLLRDLALY 314
>sp|P18900|COQ1_YEAST Hexaprenyl pyrophosphate synthase, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COQ1 PE=1
SV=1
Length = 473
Score = 196 bits (498), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 164/289 (56%), Gaps = 45/289 (15%)
Query: 167 KHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLA 226
K RRLAEI+EMIHTASL+HDDV+D SD RRG+ + + + ++AVLAGDF+ +++ ++
Sbjct: 174 KQRRLAEIVEMIHTASLLHDDVIDHSDTRRGRPSGNAAFTNKMAVLAGDFLLGRATVSIS 233
Query: 227 NLENLEVIKLISQVIKDFASGEIKQ-ASSLFDCDLE------------------------ 261
L N EV++L+S I + GE Q ++ D D++
Sbjct: 234 RLHNPEVVELMSNSIANLVEGEFMQLKNTSIDADIDTIENGHKLLPVPSKKLEVKEHDFR 293
Query: 262 -------------------LEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYG 302
E Y+ K+Y KTA+LI+ S + AAI SG ++ + Y++G
Sbjct: 294 VPSRQQGLQLSHDQIIETAFEYYIHKTYLKTAALISKSCRCAAILSGASPAVIDECYDFG 353
Query: 303 RNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCE 362
RNLG+ FQ+VDD+LDFT S + LGKP+ +DL G TAPV+FA +++P L +I F E
Sbjct: 354 RNLGICFQLVDDMLDFTVSGKDLGKPSGADLKLGIATAPVLFAWKEDPSLGPLISRNFSE 413
Query: 363 TGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLH-CLPRSPFRVALE 410
G +++ I V+ GI + + LA+E + A+ NL LP S R ALE
Sbjct: 414 RGDVEKTIDSVRLHNGIAKTKILAEEYRDKALQNLRDSLPESDARSALE 462
Score = 41.2 bits (95), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Query: 87 LNLKEKSRSP-ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRP 145
LN K +P I N +V++++ TL +N+ +++G+ +PVL F GK++RP
Sbjct: 29 LNAASKLVTPKILWNNPISLVSKEMNTLAKNIVALIGSGHPVLNKVTSYYFETEGKKVRP 88
Query: 146 ALVFLVSRATAEL 158
LV L+SRA +E+
Sbjct: 89 LLVLLLSRALSEI 101
>sp|P31114|HEPS2_BACSU Heptaprenyl diphosphate synthase component 2 OS=Bacillus subtilis
(strain 168) GN=hepT PE=1 SV=1
Length = 348
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/310 (35%), Positives = 180/310 (58%), Gaps = 11/310 (3%)
Query: 103 FEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLK 162
+ + +D+ + + L+ V ++ P+L A + AGGKR+RP V L + + G
Sbjct: 35 YSFLNDDIDVIERELEQTVRSDYPLLSEAGLHLLQAGGKRIRPVFVLL-----SGMFGDY 89
Query: 163 ELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSS 222
++ K + +A +EMIH ASL+HDDV+D++++RRG+ T+ + R+A+ GD+M A S
Sbjct: 90 DIN-KIKYVAVTLEMIHMASLVHDDVIDDAELRRGKPTIKAKWDNRIAMYTGDYMLAGSL 148
Query: 223 WYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTK 282
+ + + +++SQ I + GEI+Q ++ + L YL + KTA LIA S +
Sbjct: 149 EMMTRINEPKAHRILSQTIVEVCLGEIEQIKDKYNMEQNLRTYLRRIKRKTALLIAVSCQ 208
Query: 283 GAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPV 342
AI SG D + K +Y +G +G+S+QI+DDILDFT + E+LGKP DL +GN+T PV
Sbjct: 209 LGAIASGADEKIHKALYWFGYYVGMSYQIIDDILDFTSTEEELGKPVGGDLLQGNVTLPV 268
Query: 343 IFALEKEPKLR---EIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHC 399
++AL K P L+ ++I SE + L+ I+ +K + IE + +++ A L+
Sbjct: 269 LYAL-KNPALKNQLKLINSETTQE-QLEPIIEEIKKTDAIEASMAVSEMYLQKAFQKLNT 326
Query: 400 LPRSPFRVAL 409
LPR R +L
Sbjct: 327 LPRGRARSSL 336
>sp|P0AD58|ISPB_SHIFL Octaprenyl-diphosphate synthase OS=Shigella flexneri GN=ispB PE=3
SV=1
Length = 323
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 188/328 (57%), Gaps = 12/328 (3%)
Query: 97 ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA 156
++L I E+ A+D+ +N + + ++ ++ I GGKR+RP + L +RA
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARA-- 58
Query: 157 ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDF 216
VG + H +A +IE IHTA+L+HDDV+DESDMRRG+ T + +G +VL GDF
Sbjct: 59 --VGYE--GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDF 114
Query: 217 MFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASL 276
++ ++ + +L +L+V++++S+ + A GE+ Q ++ D D+ E Y+ Y KTA L
Sbjct: 115 IYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARL 174
Query: 277 IAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKG 336
A+ + + I +G K + +YGR LG +FQ++DD+LD+ EQLGK DL +G
Sbjct: 175 FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEG 234
Query: 337 NLTAPVIFALEK-EPKLREIIESEFCETGS----LDEAIKLVKTSGGIEEAQELAKEKAN 391
T P++ A+ P+ ++I + E G+ L+ ++ + G +E ++ A+E+A+
Sbjct: 235 KPTLPLLHAMHHGTPEQAQMIRTAI-EQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEAD 293
Query: 392 LAIHNLHCLPRSPFRVALEDMVMFNLER 419
AI L LP +P+R AL + ++R
Sbjct: 294 KAIAALQVLPDTPWREALIGLAHIAVQR 321
>sp|P0AD57|ISPB_ECOLI Octaprenyl-diphosphate synthase OS=Escherichia coli (strain K12)
GN=ispB PE=1 SV=1
Length = 323
Score = 189 bits (479), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 188/328 (57%), Gaps = 12/328 (3%)
Query: 97 ISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATA 156
++L I E+ A+D+ +N + + ++ ++ I GGKR+RP + L +RA
Sbjct: 1 MNLEKINELTAQDMAGVNAAILEQLNSDVQLINQLGYYIVSGGGKRIRPMIAVLAARA-- 58
Query: 157 ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDF 216
VG + H +A +IE IHTA+L+HDDV+DESDMRRG+ T + +G +VL GDF
Sbjct: 59 --VGYE--GNAHVTIAALIEFIHTATLLHDDVVDESDMRRGKATANAAFGNAASVLVGDF 114
Query: 217 MFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASL 276
++ ++ + +L +L+V++++S+ + A GE+ Q ++ D D+ E Y+ Y KTA L
Sbjct: 115 IYTRAFQMMTSLGSLKVLEVMSEAVNVIAEGEVLQLMNVNDPDITEENYMRVIYSKTARL 174
Query: 277 IAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKG 336
A+ + + I +G K + +YGR LG +FQ++DD+LD+ EQLGK DL +G
Sbjct: 175 FEAAAQCSGILAGCTPEEEKGLQDYGRYLGTAFQLIDDLLDYNADGEQLGKNVGDDLNEG 234
Query: 337 NLTAPVIFALEK-EPKLREIIESEFCETGS----LDEAIKLVKTSGGIEEAQELAKEKAN 391
T P++ A+ P+ ++I + E G+ L+ ++ + G +E ++ A+E+A+
Sbjct: 235 KPTLPLLHAMHHGTPEQAQMIRTAI-EQGNGRHLLEPVLEAMNACGSLEWTRQRAEEEAD 293
Query: 392 LAIHNLHCLPRSPFRVALEDMVMFNLER 419
AI L LP +P+R AL + ++R
Sbjct: 294 KAIAALQVLPDTPWREALIGLAHIAVQR 321
>sp|P44916|ISPB_HAEIN Octaprenyl-diphosphate synthase OS=Haemophilus influenzae (strain
ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ispB PE=1 SV=1
Length = 329
Score = 184 bits (468), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/333 (32%), Positives = 189/333 (56%), Gaps = 12/333 (3%)
Query: 92 KSRSPISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLV 151
K + +S+ I ++ D+Q +NQN+ + + ++ P++ I GGKR+RP + L
Sbjct: 2 KKQDLMSIDEIQKLADPDMQKVNQNILAQLNSDVPLIGQLGFYIVQGGGKRIRPLIAVLA 61
Query: 152 SRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAV 211
+R+ G +T A +E IHTASL+HDDV+DESDMRRG+ T + +G +V
Sbjct: 62 ARSLG-FEGSNSITC-----ATFVEFIHTASLLHDDVVDESDMRRGRATANAEFGNAASV 115
Query: 212 LAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYY 271
L GDF++ ++ +A LE+L+++ +++ A GE++Q ++ D + Y+ Y
Sbjct: 116 LVGDFIYTRAFQLVAQLESLKILSIMADATNVLAEGEVQQLMNVNDPETSEANYMRVIYS 175
Query: 272 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAAS 331
KTA L + + AAI +G + K + +YGR LG +FQ+VDD+LD++ + + LGK
Sbjct: 176 KTARLFEVAGQAAAIVAGGTEAQEKALQDYGRYLGTAFQLVDDVLDYSANTQALGKNVGD 235
Query: 332 DLAKGNLTAPVIFAL-----EKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELA 386
DLA+G T P++ A+ ++ +RE IE + + ++DE + ++ ++ A A
Sbjct: 236 DLAEGKPTLPLLHAMRHGNAQQAALIREAIE-QGGKREAIDEVLAIMTEHKSLDYAMNRA 294
Query: 387 KEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 419
KE+A A+ + LP S ++ AL + +++R
Sbjct: 295 KEEAQKAVDAIEILPESEYKQALISLAYLSVDR 327
>sp|O24743|SDSA_RHOCA All-trans-nonaprenyl-diphosphate synthase (geranyl-diphosphate
specific) OS=Rhodobacter capsulatus GN=sdsA PE=1 SV=1
Length = 325
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 109/324 (33%), Positives = 183/324 (56%), Gaps = 11/324 (3%)
Query: 101 NIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVG 160
+I VA+D ++Q + + ++ ++MS ++ + AGGKR+RP + L + A E
Sbjct: 8 DILAPVAQDFAAMDQFINEGISSKVALVMSVSKHVVEAGGKRMRPIMCLLAAYACGET-- 65
Query: 161 LKELTTKH-RRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFA 219
KH ++LA IIEM+HTA+L+HDDV+DES +RRG+ T + + + AVL GDF+ A
Sbjct: 66 ----NLKHAQKLAAIIEMLHTATLVHDDVVDESGLRRGRPTANATWNNQTAVLVGDFLIA 121
Query: 220 QSSWYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAA 279
++ L +L+N+ ++K S + A GE+ Q + D + YL + KT+ L
Sbjct: 122 RAFDLLVDLDNMILLKDFSTGTCEIAEGEVLQLQAQHQPDTTEDIYLQIIHGKTSRLFEL 181
Query: 280 STKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLT 339
+T+GAAI +G + + + + G +FQI+DDILD+T A+ LGK DL +G T
Sbjct: 182 ATEGAAILAG-KPEYREPLRRFAGHFGNAFQIIDDILDYTSDADTLGKNIGDDLMEGKPT 240
Query: 340 APVIFALEK-EPKLREIIESEFCETGS--LDEAIKLVKTSGGIEEAQELAKEKANLAIHN 396
P+I A++ + + R++I G+ L++ I +V+ SG ++ + A E+ A+
Sbjct: 241 LPLIAAMQNTQGEQRDLIRRSIATGGTSQLEQVIAIVQNSGALDYCHKRATEETERALQA 300
Query: 397 LHCLPRSPFRVALEDMVMFNLERF 420
L LP S +R AL ++ L+R
Sbjct: 301 LEILPESTYRQALVNLTRLALDRI 324
>sp|Q58270|IDSA_METJA Short chain isoprenyl diphosphate synthase OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=idsA PE=3 SV=1
Length = 327
Score = 151 bits (382), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 108/328 (32%), Positives = 177/328 (53%), Gaps = 36/328 (10%)
Query: 110 LQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALV---FLVSRATAELVGLKELTT 166
LQ +++ LK+ V ++ L +A++ + AGGKR+RP L +++ + E V
Sbjct: 18 LQKIDEELKTYVDKDDK-LYNASKHLLFAGGKRIRPYLTVVTYMLKKDDIEEV------- 69
Query: 167 KHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQS----S 222
A +E+IH +LIHDD++D D RRG+ TVH +YG +A+LAGD ++A++ S
Sbjct: 70 --LPAAAAVELIHNYTLIHDDIMDNDDERRGKPTVHVVYGEPMAILAGDLLYAKAFEAVS 127
Query: 223 WYLANLENLEVIKLISQVIKDFASGEIKQASSLFDCDLE-----LEEYLIKSYYKTASLI 277
N + EV+K++S+ + G+ D + E +EEYL KT +L+
Sbjct: 128 RIKDNKKAHEVLKILSKACVEVCEGQA------MDMEFENYYPTMEEYLDMIRKKTGALL 181
Query: 278 AASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGN 337
AS A+ + + + + EY + +GL+FQI DD+LD ++LGKP SD+ +G
Sbjct: 182 EASVGIGAVMADCNEEEREALKEYAKRIGLTFQIQDDVLDLIGDQKKLGKPVGSDIREGK 241
Query: 338 LTAPVIFAL-----EKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANL 392
T VI AL +K+ +L EI+ ++ + + EAI+++K S IE A+EL K+K
Sbjct: 242 KTIIVIHALKTLDEDKKKRLLEILGNKNVKDEEIKEAIEILKPS--IEYAKELMKQKTEE 299
Query: 393 AIHNLHCLPRSPFRVALEDMVMFNLERF 420
A L + +V LED+ F + R
Sbjct: 300 AKEYLKIFNKDRRKV-LEDLADFIMSRI 326
>sp|O66129|HEXB_MICLU Hexaprenyl-diphosphate synthase large subunit
((2E,6E)-farnesyl-diphosphate specific) OS=Micrococcus
luteus GN=hexs-b PE=1 SV=1
Length = 325
Score = 147 bits (371), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/312 (30%), Positives = 163/312 (52%), Gaps = 24/312 (7%)
Query: 113 LNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALV----FLVSRATAELVGLKELTTKH 168
+ + L + +++ + AA I +GGKR+RP V FL +L+
Sbjct: 17 VEKRLYECIQSDSETINKAAHHILSSGGKRVRPMFVLLSGFLNDTQKDDLI--------- 67
Query: 169 RRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANL 228
R A +E++H ASL+HDD +D SDMRRG +VH + A+ G F+ A++ +A +
Sbjct: 68 -RTAVSLELVHMASLVHDDYIDNSDMRRGNTSVHIAFDKDTAIRTGHFLLARALQNIATI 126
Query: 229 ENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFS 288
N + ++ S+ I + GE Q + F+ + YL + KTA LI AS A+ S
Sbjct: 127 NNSKFHQIFSKTILEVCFGEFDQMADRFNYPVSFTAYLRRINRKTAILIEASCHLGALSS 186
Query: 289 GVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFAL-- 346
+D + + ++G +G+S+QI+DDILD+T LGKP SD+ G++T P++ A+
Sbjct: 187 QLDEQSTYHIKQFGHCIGMSYQIIDDILDYTSDEATLGKPVGSDIRNGHITYPLMAAIAN 246
Query: 347 ---EKEPKLREIIESEFCETGSLDEAIKLVKT---SGGIEEAQELAKEKANLAIHNLHCL 400
+ + KL +++ + S DE + + + GIE A+ L+++ + A ++L L
Sbjct: 247 LKEQDDDKLEAVVKH--LTSTSDDEVYQYIVSQVKQYGIEPAELLSRKYGDKAKYHLSQL 304
Query: 401 PRSPFRVALEDM 412
S + LE++
Sbjct: 305 QDSNIKDYLEEI 316
>sp|O26156|IDSA_METTH Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=idsA PE=3 SV=1
Length = 325
Score = 139 bits (350), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 113/302 (37%), Positives = 161/302 (53%), Gaps = 19/302 (6%)
Query: 128 LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDD 187
L+ A+E + AGGK++RP+L L S A G +A IE+IHT SLIHDD
Sbjct: 31 LLRASEHLITAGGKKIRPSLALLSSEAVGGDPG------DAAGVAAAIELIHTFSLIHDD 84
Query: 188 VLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKD---- 243
++D+ ++RRG+ VH L+G +A+LAGD +F+++ + + E++K V+ D
Sbjct: 85 IMDDDEIRRGEPAVHVLWGEPMAILAGDVLFSKAFEAVIRNGDSEMVKEALAVVVDSCVK 144
Query: 244 FASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGR 303
G+ D+ EEY+ Y KTA+LIAA+TK AI G + +YGR
Sbjct: 145 ICEGQALDMGFEERLDVTEEEYMEMIYKKTAALIAAATKAGAIMGGGSPQEIAALEDYGR 204
Query: 304 NLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEK-EPKLREIIESEFCE 362
+GL+FQI DD LD E LGKP SD+A+G +T V+ ALE+ K RE + S
Sbjct: 205 CIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALERASEKDRERLISIL-- 262
Query: 363 TGSLD-----EAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNL 417
GS D EAI++ + G E A +A + +A L L S R AL + F L
Sbjct: 263 -GSGDEKLVAEAIEIFERYGATEYAHAVALDHVRMAKERLEVLEESDAREALAMIADFVL 321
Query: 418 ER 419
ER
Sbjct: 322 ER 323
>sp|P39464|GGPS_SULAC Geranylgeranyl diphosphate synthase OS=Sulfolobus acidocaldarius
(strain ATCC 33909 / DSM 639 / JCM 8929 / NBRC 15157 /
NCIMB 11770) GN=gds PE=1 SV=1
Length = 330
Score = 136 bits (343), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 141/259 (54%), Gaps = 37/259 (14%)
Query: 108 EDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTK 167
E + ++N +KS + + P L A+ +F +GGKRLRP L+ +++L G +
Sbjct: 10 EIVNSVNDIIKSYISGDVPKLYEASYHLFTSGGKRLRP----LILTISSDLFGGQRERAY 65
Query: 168 HRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN 227
+ A IE++HT +L+HDD++D+ ++RRG TVH YG +A+LAGD + A++
Sbjct: 66 YAGAA--IEVLHTFTLVHDDIMDQDNIRRGLPTVHVKYGLPLAILAGDLLHAKA------ 117
Query: 228 LENLEVIKLISQVIKDFASGEIKQASSLFD-----------CDLELE--------EYLIK 268
+L++Q ++ S I +A +F D+E E EYL
Sbjct: 118 ------FQLLTQALRGLPSETIIKAFDIFTRSIIIISEGQAVDMEFEDRIDIKEQEYLDM 171
Query: 269 SYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKP 328
KTA+L +AS+ A+ +G + + + M ++G NLG++FQIVDDIL T ++LGKP
Sbjct: 172 ISRKTAALFSASSSIGALIAGANDNDVRLMSDFGTNLGIAFQIVDDILGLTADEKELGKP 231
Query: 329 AASDLAKGNLTAPVIFALE 347
SD+ +G T VI LE
Sbjct: 232 VFSDIREGKKTILVIKTLE 250
>sp|P95999|GGPS_SULSO Geranylgeranyl diphosphate synthase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) GN=gds
PE=3 SV=2
Length = 332
Score = 135 bits (339), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 105/326 (32%), Positives = 171/326 (52%), Gaps = 21/326 (6%)
Query: 108 EDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTK 167
E + +N +K+ V + L A+ +F AGGKRLRP LV ++++L+G +
Sbjct: 12 EIVNNVNFRIKNFVKSNFKTLEEASFHLFTAGGKRLRP----LVLVSSSDLIGGDR--ER 65
Query: 168 HRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQS----SW 223
+ A +E++H +L+HDD++D +RRG TVH +G +A+LAGD++ A++ +
Sbjct: 66 AYKAAAAVEILHNFTLVHDDIMDNDGLRRGLPTVHVKWGEPMAILAGDYLHAKAFEALNE 125
Query: 224 YLANLENLEVIKLISQVIKDF---ASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAAS 280
L L+ K S I + G+ S D+ EEY+ KTA L + S
Sbjct: 126 ALKGLDGNTFYKAFSIFITSIEIISEGQAMDMSFENRLDVTEEEYIQMIKGKTAMLFSCS 185
Query: 281 TKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTA 340
I + + + K++ EYG NLG+SFQIVDDIL ++LGKP SD+ +G T
Sbjct: 186 AALGGIINKANDDVVKKLTEYGLNLGISFQIVDDILGIIGDEKELGKPIYSDIREGKKTI 245
Query: 341 PVIFAL----EKEPK-LREIIESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIH 395
VI L E E K L + ++ + L+ A ++++ ++ A +LAK+ ++LAI
Sbjct: 246 LVIKTLSEATEDEKKILVSTLGNKEAKKEDLERASEIIRKH-SLQYAYDLAKKYSDLAIE 304
Query: 396 NLHCLPRS--PFRVALEDMVMFNLER 419
NL +P S AL+ + F ++R
Sbjct: 305 NLREIPVSNKTAEKALKYLAQFTIQR 330
>sp|P34802|GGPP1_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit
1, chloroplastic OS=Arabidopsis thaliana GN=GGPPS1 PE=1
SV=2
Length = 371
Score = 134 bits (336), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 97/267 (36%), Positives = 145/267 (54%), Gaps = 26/267 (9%)
Query: 111 QTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHR 169
+ +N+ L S V P+ + A AGGKR+RP L A ELVG +E T
Sbjct: 85 ELVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCI----AACELVGGEESTAMPA 140
Query: 170 RLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN 227
A +EMIHT SLIHDD+ +D D+RRG+ T H+++G VAVLAGD + + + +LA+
Sbjct: 141 ACA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLSFAFEHLAS 198
Query: 228 ------LENLEVIKLISQVIK-----DFASGEIKQASS----LFDCDLELEEYLIKSYYK 272
+ + V++ + ++ K +G++ SS L D LE E++ +K
Sbjct: 199 ATSSDVVSPVRVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNDVGLEHLEFI--HLHK 256
Query: 273 TASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASD 332
TA+L+ AS AI G +++ ++ R +GL FQ+VDDILD T+S+++LGK A D
Sbjct: 257 TAALLEASAVLGAIVGGGSDDEIERLRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKD 316
Query: 333 LAKGNLTAPVIFALEKEPKLREIIESE 359
L LT P I LEK + E + E
Sbjct: 317 LIADKLTYPKIMGLEKSREFAEKLNRE 343
>sp|Q94ID7|GGPPS_HEVBR Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Hevea
brasiliensis GN=GGPS PE=1 SV=1
Length = 370
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/286 (31%), Positives = 152/286 (53%), Gaps = 18/286 (6%)
Query: 89 LKEKSRSPISLANIFEVVAEDLQTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPAL 147
L+E+ +P + + + ++NQ L++ + + P + + AGGKR+RPAL
Sbjct: 66 LQEEQNNPPPSFDFKSYMLQKGNSINQALEAAIPLQEPAKIHESMRYSLLAGGKRVRPAL 125
Query: 148 VFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLY 205
A ELVG + A +EMIHT SLIHDD+ +D D+RRG+ T H ++
Sbjct: 126 CL----AACELVGGNDSMAMPAACA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHIVF 179
Query: 206 GTRVAVLAGDFMFAQSSWYLA----NLENLEVIKLISQVIK-----DFASGEIKQASSLF 256
G VAVLAGD + A + ++A N+ + +++ + ++ K +G++ +S
Sbjct: 180 GEDVAVLAGDALLAFAFEHIAVSTLNVSSARIVRAVGELAKAIGAEGLVAGQVVDINSEG 239
Query: 257 DCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDIL 316
+++LE+ +KTA L+ + AI G +++ +Y R++GL FQ+VDDIL
Sbjct: 240 SSEVDLEKLEFIHIHKTAKLLEGAVVLGAILGGGTDEEVEKLRKYARDIGLLFQVVDDIL 299
Query: 317 DFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCE 362
D T+S+++LGK A DL +T P + +EK + E + E E
Sbjct: 300 DVTKSSQELGKTAGKDLVADKVTYPKLLGIEKSREFAEKLNKEAQE 345
>sp|Q43133|GGPPS_SINAL Geranylgeranyl pyrophosphate synthase, chloroplastic/chromoplastic
OS=Sinapis alba GN=GGPS1 PE=1 SV=1
Length = 366
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/264 (35%), Positives = 143/264 (54%), Gaps = 21/264 (7%)
Query: 111 QTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHR 169
++N+ L S V P+ + A AGGKR+RP L A ELVG +E
Sbjct: 81 DSVNKALDSAVPLREPLKIHEAMRYSLLAGGKRVRPVLCI----AACELVGGEESLAMPA 136
Query: 170 RLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN 227
R A +EMIHT SLIHDD+ +D D+RRG+ T H++YG VAVLAGD + + + +LA+
Sbjct: 137 RCA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHLAS 194
Query: 228 LENLEV-----IKLISQVIK-----DFASGEIKQASS--LFDCDLELEEYLIKSYYKTAS 275
+ EV ++ + ++ K +G++ SS L ++ LE +KTA+
Sbjct: 195 ATSSEVSPARVVRAVGELAKAIGTEGLVAGQVVDISSEGLDLNNVGLEHLKFIHLHKTAA 254
Query: 276 LIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAK 335
L+ AS I G +++ ++ R +GL FQ+VDDILD T+S+++LGK A DL
Sbjct: 255 LLEASAVLGGIIGGGSDEEIERLRKFARCIGLLFQVVDDILDVTKSSQELGKTAGKDLIA 314
Query: 336 GNLTAPVIFALEKEPKLREIIESE 359
LT P + LEK + E + +E
Sbjct: 315 DKLTYPKLMGLEKSREFAEKLNTE 338
>sp|Q9ZU77|GGPP7_ARATH Geranylgeranyl pyrophosphate synthase 7, chloroplastic
OS=Arabidopsis thaliana GN=At2g18620 PE=2 SV=1
Length = 347
Score = 128 bits (321), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 134/257 (52%), Gaps = 31/257 (12%)
Query: 111 QTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHR 169
+N+ L S V P+ + A A GKR+RP L A ELVG +E
Sbjct: 64 NAVNEALDSAVSLREPIKIHEAIRYSLLARGKRVRPVLCI----AACELVGGEESVALPA 119
Query: 170 RLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN 227
A +EMIHT SLIHDD+ +D D+RRG+ T H+++G VAVLAGD + + + +LA
Sbjct: 120 ACA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALISFAFEHLAT 177
Query: 228 ---LENLEVIKLISQVIK-------------DFASGEIKQASSLFDCDLELEEYLIKSYY 271
+ V++ I ++ K D SG + Q D LE+ E++ +
Sbjct: 178 STAVSPARVVRAIGELAKAIGSKGLVAGQVVDLTSGGMDQN----DVGLEVLEFI--HVH 231
Query: 272 KTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAAS 331
KTA L+ A+T AI G +++ + R +GL FQ+VDDILD T+S+E+LGK A
Sbjct: 232 KTAVLLEAATVLGAIVGGGSDEEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGK 291
Query: 332 DLAKGNLTAPVIFALEK 348
DL LT P + LEK
Sbjct: 292 DLIADKLTYPKLMGLEK 308
>sp|P80042|GGPPS_CAPAN Geranylgeranyl pyrophosphate synthase, chloroplastic OS=Capsicum
annuum GN=GGPS1 PE=3 SV=1
Length = 369
Score = 127 bits (319), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 134/255 (52%), Gaps = 18/255 (7%)
Query: 106 VAEDLQTLNQNL-KSIVGAENPVLMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKEL 164
V E ++N+ L ++I+ E V+ A AGGKR+RP L A ELVG +
Sbjct: 82 VTEKAISVNKALDEAIIVKEPHVIHEAMRYSLLAGGKRVRPMLCL----AACELVGGNQE 137
Query: 165 TTKHRRLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSS 222
A +EMIHT SLIHDD+ +D D+RRG+ T H++YG VAVLAGD + A +
Sbjct: 138 NAMAAACA--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKIYGEDVAVLAGDSLLAFAF 195
Query: 223 WYLAN----LENLEVIKLISQVIKDFAS-----GEIKQASSLFDCDLELEEYLIKSYYKT 273
++ N + ++ ++++ K + G++ + + LE +KT
Sbjct: 196 EHIVNSTAGVTPSRIVGAVAELAKSIGTEGLVAGQVADIKCTGNASVSLETLEFIHVHKT 255
Query: 274 ASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDL 333
A+L+ +S AI G +++ + R +GL FQ+VDDILD T+S+E+LGK A DL
Sbjct: 256 AALLESSVVLGAILGGGTNVEVEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDL 315
Query: 334 AKGNLTAPVIFALEK 348
T P + LEK
Sbjct: 316 VVDKTTYPKLLGLEK 330
>sp|Q42698|GGPPS_CATRO Geranylgeranyl pyrophosphate synthase, chloroplastic
OS=Catharanthus roseus GN=GGPS1 PE=3 SV=1
Length = 357
Score = 125 bits (315), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 126/233 (54%), Gaps = 17/233 (7%)
Query: 138 AGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 195
AGGKR+RP L A EL G E A +EMIHT SL+HDD+ +D D+R
Sbjct: 103 AGGKRVRPMLCI----AACELFGGTESVAMPSACA--VEMIHTMSLMHDDLPCMDNDDLR 156
Query: 196 RGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN----LENLEVIKLISQVIKDFAS----- 246
RG+ T H+++G VAVLAGD + A + ++A + + +++++ ++ K S
Sbjct: 157 RGKPTNHKVFGEDVAVLAGDALLAFAFEHIATATKGVSSERIVRVVGELAKCIGSEGLVA 216
Query: 247 GEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLG 306
G++ S D+ LE +KTA+L+ S AI G + ++ ++ R +G
Sbjct: 217 GQVVDVCSEGIADVGLEHLEFIHIHKTAALLEGSVVLGAIVGGANDEQISKLRKFARCIG 276
Query: 307 LSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESE 359
L FQ+VDDILD T+S+++LGK A DL +T P + ++K + E + E
Sbjct: 277 LLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIDKSREFAEKLNRE 329
>sp|Q3IPL1|GFPS_NATPD Geranylfarnesyl diphosphate synthase OS=Natronomonas pharaonis
(strain DSM 2160 / ATCC 35678) GN=idsA3 PE=1 SV=1
Length = 341
Score = 125 bits (313), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 94/333 (28%), Positives = 172/333 (51%), Gaps = 23/333 (6%)
Query: 106 VAEDLQTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKEL 164
+AE + +N+ + + + P L SA+ + AGGKRLRP ++ L + + A++ + L
Sbjct: 11 IAERREIVNEAVSEQLPVQKPERLYSASRYLLDAGGKRLRPTILLLAAESLADV---EPL 67
Query: 165 TTKHRRLAEI-------------IEMIHTASLIHDDVLDESDMRRGQETVHQLYGTRVAV 211
+ +R+ + IE+I + +LIHDD++D+ D+RRG VH+ Y A+
Sbjct: 68 SADYRQFPSLPGDEVDVLSAAVSIEVIQSFTLIHDDIMDDDDLRRGVPAVHREYDLETAI 127
Query: 212 LAGDFMFAQSSWYLANL-----ENLEVIKLISQVIKDFASGEIKQASSLFDCDLELEEYL 266
LAGD +++++ Y+ + ++E + ++ + G+ D+ EEYL
Sbjct: 128 LAGDTLYSKAFEYMLDTGAPAERSVEALDELATTCTEICEGQALDVDFENRSDVTTEEYL 187
Query: 267 IKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLG 326
+KTA L AA+ AI G D + ++ YG ++G +FQI DD+LD T +++LG
Sbjct: 188 EMVEFKTAVLYAAAASIPAILLGSDDETVEALHGYGLDIGRAFQIQDDLLDLTAPSDELG 247
Query: 327 KPAASDLAKGNLTAPVIFALEKEPKLREIIESEFCETGSLDEAIKLVKTSGGIEEAQELA 386
K SDL + T + A ++ + ++ S+ ++ A++ ++ +G I+ A+E+A
Sbjct: 248 KQRGSDLVENKRTVITLHARDQGIDVEGLV-SDDPSDAEIEAAVQTLEDAGSIDFAREMA 306
Query: 387 KEKANLAIHNLHCLPRSPFRVALEDMVMFNLER 419
+ L LP + R LED+ F +ER
Sbjct: 307 LDLVTSGKERLDVLPENEARQLLEDIADFLVER 339
>sp|Q53479|IDSA_METTM Short chain isoprenyl diphosphate synthase OS=Methanothermobacter
marburgensis (strain DSM 2133 / 14651 / NBRC 100331 /
OCM 82 / Marburg) GN=idsA PE=1 SV=3
Length = 325
Score = 124 bits (312), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 23/304 (7%)
Query: 128 LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDD 187
L+ A+E + AGGK++RP+L L + E VG +A IE+IHT SLIHDD
Sbjct: 31 LLKASEHLITAGGKKIRPSLALL----SCEAVGGN--PEDAAGVAAAIELIHTFSLIHDD 84
Query: 188 V-----LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIK 242
+ MRRG+ +VH ++G +A+LAGD +F+++ + + E +K V+
Sbjct: 85 IMDDDE-----MRRGEPSVHVIWGEPMAILAGDVLFSKAFEAVIRNGDSERVKDALAVVV 139
Query: 243 D----FASGEIKQASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQM 298
D G+ D+ +EY+ Y KTA+LIAA+TK AI G + +
Sbjct: 140 DSCVKICEGQALDMGFEERLDVTEDEYMEMIYKKTAALIAAATKAGAIMGGASEREVEAL 199
Query: 299 YEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALE---KEPKLREI 355
+YG+ +GL+FQI DD LD E LGKP SD+A+G +T V+ ALE +E + R I
Sbjct: 200 EDYGKFIGLAFQIHDDYLDVVSDEESLGKPVGSDIAEGKMTLMVVKALEEASEEDRERLI 259
Query: 356 IESEFCETGSLDEAIKLVKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMF 415
+ GS+ EAI++ + G + A E+A + +A L L S R AL + F
Sbjct: 260 SILGSGDEGSVAEAIEIFERYGATQYAHEVALDYVRMAKERLEILEDSDARDALMRIADF 319
Query: 416 NLER 419
LER
Sbjct: 320 VLER 323
>sp|Q9SLG2|GGPP4_ARATH Geranylgeranyl pyrophosphate synthase 4 OS=Arabidopsis thaliana
GN=GGPP4 PE=2 SV=1
Length = 372
Score = 124 bits (310), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/257 (35%), Positives = 140/257 (54%), Gaps = 20/257 (7%)
Query: 111 QTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHR 169
+T+N+ L + P+ + A AGGKR+RP L A ELVG +E
Sbjct: 90 ETINRALDEAIPLIEPLNIHKAMRYAILAGGKRVRPILCL----AACELVGGEERLAIQA 145
Query: 170 RLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYL-- 225
A +EMIHT SLI DD+ +D D+RRG+ T H+++G VA+L+G + A + +L
Sbjct: 146 ACA--VEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTE 203
Query: 226 ANLENLEVIKLISQVIKDFAS-----GEIKQASS--LFDCDLELEEYLIKSYYKTASLIA 278
A++ + ++++ + ++ K + G+ K SS L D+ LE+ +KT SL+
Sbjct: 204 ADVSSKKMVRAVKELAKSIGTKGLVAGQAKDLSSEGLEQNDVGLEDLEYIHVHKTGSLLE 263
Query: 279 ASTK-GAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGN 337
AS GA I G + + K + + R +GL FQ+VDDILD T+S+E+LGK A D G
Sbjct: 264 ASAVIGAVIGGGTEKEIEK-VRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGK 322
Query: 338 LTAPVIFALEKEPKLRE 354
LT P + +EK + E
Sbjct: 323 LTYPKVIGVEKSKEFVE 339
>sp|Q9UWR6|GFPS_AERPX Geranylfarnesyl diphosphate synthase OS=Aeropyrum pernix GN=fgs
PE=1 SV=1
Length = 318
Score = 121 bits (304), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 90/272 (33%), Positives = 141/272 (51%), Gaps = 19/272 (6%)
Query: 128 LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDD 187
L A+ + AGGKRLRP + L TA ++G E + LA IE HT SLIHDD
Sbjct: 18 LSGASLHLIKAGGKRLRPLITLL----TARMLGGLEAEARAIPLAASIETAHTFSLIHDD 73
Query: 188 VLDESDMRRGQETVHQLYGTRVAVLAGDFMFAQS--------SWYLANLENLEVIKLISQ 239
++D ++RRG T H +YG A+LAGD + A + W +++ + K++S+
Sbjct: 74 IMDRDEVRRGVPTTHVVYGDDWAILAGDTLHAAAFKMIADSREWGMSHEQAYRAFKVLSE 133
Query: 240 VIKDFASGEIKQASSLFD--CDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQ 297
+ G+ LF+ D+++ +YL KT +LI A+ + A+ +G + K
Sbjct: 134 AAIQISRGQ--AYDMLFEETWDVDVADYLNMVRLKTGALIEAAARIGAVAAGAGSEIEKM 191
Query: 298 MYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIE 357
M E G N G++FQI DDIL + GKP +DL +G T VI+A++K + REI++
Sbjct: 192 MGEVGMNAGIAFQIRDDILGVIGDPKVTGKPVYNDLRRGKKTLLVIYAVKKAGR-REIVD 250
Query: 358 --SEFCETGSLDEAIKLVKTSGGIEEAQELAK 387
L A ++ SG ++ A+ A+
Sbjct: 251 LIGPKASEDDLKRAASIIVDSGALDYAESRAR 282
>sp|Q9LRR0|GGPP8_ARATH Putative geranylgeranyl pyrophosphate synthase 8, chloroplastic
OS=Arabidopsis thaliana GN=At3g14510 PE=5 SV=2
Length = 361
Score = 119 bits (299), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 131/236 (55%), Gaps = 20/236 (8%)
Query: 138 AGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 195
AGGKR+RP L A ELVG E T A +EMIHT+SLIHDD+ +D +D+R
Sbjct: 104 AGGKRVRPLLCI----AVCELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDNADLR 157
Query: 196 RGQETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLENLEVIKLISQVI--KDFA 245
RG+ T H+++G +AVLAG + M SS +A+ + + +++ I K
Sbjct: 158 RGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVELARAIGTKGLV 217
Query: 246 SGEIKQASS--LFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGR 303
+G++ SS L D+ LE +KTA+L+ A+ AI G +++ +Y R
Sbjct: 218 AGQVVDLSSERLNPHDVGLERLEFIHLHKTAALLEAAAVIGAIMGGGTEEEIEKLRKYAR 277
Query: 304 NLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESE 359
+GL FQ+VDDILD T+S E+LGK A D+ G LT P + LE+ ++ E + E
Sbjct: 278 CIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLERSREVAEKLSRE 333
>sp|P48368|CRTE_CYAPA Geranylgeranyl pyrophosphate synthase homolog OS=Cyanophora
paradoxa GN=crtE PE=3 SV=1
Length = 300
Score = 119 bits (297), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 133/273 (48%), Gaps = 22/273 (8%)
Query: 101 NIFEVVAEDLQTLNQNLKSIVGAENPVLM-SAAEQIFGAGGKRLRPALVFLVSRATAELV 159
N+ + E + + L + NP + + AGGKR+RP L A+ EL
Sbjct: 9 NLLTYLYERKEIVEDTLNKSIPRGNPTFIYDSIRYSLSAGGKRIRPILCL----ASCELA 64
Query: 160 GLKELTTKHRRL--AEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGD 215
G T L A +EMIHT SLIHDD+ +D RRG+ T H +YG +A+LAGD
Sbjct: 65 G----GTMEMALPTACALEMIHTMSLIHDDLPAMDNDSYRRGKPTNHIIYGEDLAILAGD 120
Query: 216 FMFAQSSWYLA----NLENLEVIKLISQVIKDFAS-----GEIKQASSLFDCDLELEEYL 266
+ A + ++A N+ ++K+I+QV + G+I SS D LE
Sbjct: 121 ALLAYAFEFIATQTKNVPADLIVKVIAQVAHSVTTSGLVGGQIIDLSSEGKSDTTLETLN 180
Query: 267 IKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLG 326
+KT +L+ A+ A+ +G + Y +N+GL+FQI+DD+LD + E+LG
Sbjct: 181 FIHIHKTGALLEAAVLSGALLAGAKEKDMNRFLRYAQNIGLAFQIIDDVLDIISTEEKLG 240
Query: 327 KPAASDLAKGNLTAPVIFALEKEPKLREIIESE 359
K DL T P + +E+ K E++ E
Sbjct: 241 KSIGKDLKTQKATYPSFWGVEESIKQAELLVEE 273
>sp|Q9LJY2|GGPPA_ARATH Geranylgeranyl pyrophosphate synthase 10, mitochondrial
OS=Arabidopsis thaliana GN=At3g20160 PE=2 SV=1
Length = 344
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 131/259 (50%), Gaps = 21/259 (8%)
Query: 111 QTLNQNLKSIVGAENPVLM--SAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKH 168
+++N+ L+ V P L A + GKR+RP L A ELVG +E T
Sbjct: 59 KSVNKALEEAVPLREPELKIREAMRYTLLSDGKRVRPMLCL----AACELVGGQESTAMS 114
Query: 169 RRLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFA-----QS 221
A IEM+H +SLI DD+ +D +RRG+ T H ++G +A+LA + A +
Sbjct: 115 AACA--IEMLHASSLILDDLPCMDNDSLRRGKPTNHIVFGESIAILASQALIALAVQKTT 172
Query: 222 SWYLANLENLEVIKLISQVIKDFASGEIKQASSL------FDCDLELEEYLIKSYYKTAS 275
S A++ ++K + +++K Q + L FD D LE +KTA+
Sbjct: 173 SSTFADVPPERILKTVQEMVKAVEGLVAGQQADLAGEGMRFDSDTGLEHLEFIHIHKTAA 232
Query: 276 LIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAK 335
L+ A+ AI G +++ Y R +GL FQ+VDD+LD T+S+E+LGK A DL
Sbjct: 233 LLEAAAVMGAIMGGGSDEEIERLRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIA 292
Query: 336 GNLTAPVIFALEKEPKLRE 354
G LT P + +EK + E
Sbjct: 293 GKLTYPRLMGVEKSKEYAE 311
>sp|P0A5H8|EFPP_MYCTU (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium tuberculosis
GN=Rv3398c PE=1 SV=1
Length = 359
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 24/295 (8%)
Query: 140 GKRLRPALVFLVSRATAELVGLKELTTKHRRL--AEIIEMIHTASLIHDDVLDESDMRRG 197
GK +RPALVF+ + A H + A +E++H SL+HDD++D + RR
Sbjct: 72 GKAIRPALVFVAAEAAG--------ADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRH 123
Query: 198 QETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEV---IKLISQVIKDFASGEIKQASS 254
+ TV L+G +A+LAGD M + + L + ++ V ++ IS+ ++ G+ +
Sbjct: 124 RPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAF 183
Query: 255 LFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDD 314
D+ L+E L + KTA+L+AAS + A+ +G S+ + + YGR++GL+FQ+VDD
Sbjct: 184 ESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDD 243
Query: 315 ILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLRE-----IIESEFCETGSLDE- 368
+L E GKP SDL T PV + + +++ +T S DE
Sbjct: 244 LLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDEL 303
Query: 369 --AIKLVKTSGGIEEAQELAKEKANLAIHNLH--CLPRSPFRVALEDMVMFNLER 419
+L++ GG A A+ I + +P P L+D+ + ++R
Sbjct: 304 AAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPA-AELQDLAHYIVDR 357
>sp|P0A5H9|EFPP_MYCBO (2E,6E)-farnesyl diphosphate synthase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb3431c PE=3 SV=1
Length = 359
Score = 117 bits (293), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 146/295 (49%), Gaps = 24/295 (8%)
Query: 140 GKRLRPALVFLVSRATAELVGLKELTTKHRRL--AEIIEMIHTASLIHDDVLDESDMRRG 197
GK +RPALVF+ + A H + A +E++H SL+HDD++D + RR
Sbjct: 72 GKAIRPALVFVAAEAAG--------ADPHSAIPGAVSVELVHNFSLVHDDLMDRDEHRRH 123
Query: 198 QETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEV---IKLISQVIKDFASGEIKQASS 254
+ TV L+G +A+LAGD M + + L + ++ V ++ IS+ ++ G+ +
Sbjct: 124 RPTVWALWGDAMALLAGDAMLSLAHEVLLDCDSPHVGAALRAISEATRELIRGQAADTAF 183
Query: 255 LFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDD 314
D+ L+E L + KTA+L+AAS + A+ +G S+ + + YGR++GL+FQ+VDD
Sbjct: 184 ESRTDVALDECLKMAEGKTAALMAASAEVGALLAGAPRSVREALVAYGRHIGLAFQLVDD 243
Query: 315 ILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLRE-----IIESEFCETGSLDE- 368
+L E GKP SDL T PV + + +++ +T S DE
Sbjct: 244 LLGIWGRPEITGKPVYSDLRSRKKTLPVTWTVAHGGSAGRRLAAWLVDETGSQTASDDEL 303
Query: 369 --AIKLVKTSGGIEEAQELAKEKANLAIHNLH--CLPRSPFRVALEDMVMFNLER 419
+L++ GG A A+ I + +P P L+D+ + ++R
Sbjct: 304 AAVAELIECGGGRRWASAEARRHVTQGIDMVARIGIPDRPA-AELQDLAHYIVDR 357
>sp|Q08291|ISPA_GEOSE Farnesyl diphosphate synthase OS=Geobacillus stearothermophilus
PE=1 SV=1
Length = 297
Score = 115 bits (288), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 23/223 (10%)
Query: 138 AGGKRLRPALVFLVSRATAE--LVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESD 193
AGGKR+RP L+ RA + VGL +A IEMIHT SLIHDD+ +D D
Sbjct: 44 AGGKRIRPLLLLSTVRALGKDPAVGLP--------VACAIEMIHTYSLIHDDLPSMDNDD 95
Query: 194 MRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLANLENLEV-----IKLISQVIKDFASGE 248
+RRG+ T H+++G +A+LAGD + + + +++ + ++LI ++ K A E
Sbjct: 96 LRRGKPTNHKVFGEAMAILAGDGLLTYAFQLITEIDDERIPPSVRLRLIERLAK-AAGPE 154
Query: 249 IKQASSLFDCD-----LELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGR 303
A D + L L E +KT ++ S A+ G D ++++ E+
Sbjct: 155 GMVAGQAADMEGEGKTLTLSELEYIHRHKTGKMLQYSVHAGALIGGADARQTRELDEFAA 214
Query: 304 NLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFAL 346
+LGL+FQI DDILD + E++GKP SD + T P + +L
Sbjct: 215 HLGLAFQIRDDILDIEGAEEKIGKPVGSDQSNNKATYPALLSL 257
>sp|Q9LHR4|GGPPC_ARATH Geranylgeranyl pyrophosphate synthase 12, chloroplastic
OS=Arabidopsis thaliana GN=At3g32040 PE=2 SV=1
Length = 360
Score = 112 bits (279), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/241 (36%), Positives = 134/241 (55%), Gaps = 24/241 (9%)
Query: 138 AGGKRLRPALVFLVSRATAELVGLKELTTKHRRLAEIIEMIHTASLIHDDV--LDESDMR 195
AGGKR+RP L A ELVG E T A +EMIHT+SLIHDD+ +D++D+R
Sbjct: 103 AGGKRVRPLLCI----AACELVGGDEATAMSAACA--VEMIHTSSLIHDDLPCMDDADLR 156
Query: 196 RGQETVHQLYGTRVAVLAG--------DFMFAQSSWYLANLENLEVIKLISQVI--KDFA 245
RG+ T H+++G +AVLAG + M SS +A + + +++ I K
Sbjct: 157 RGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRSVTELAKAIGTKGLV 216
Query: 246 SGEIK----QASSLFDCDLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEY 301
+G++ Q + +D LE E++ +KTA+L+ A+ AI G +++ +Y
Sbjct: 217 AGQVSDLCSQGLNPYDVGLERLEFI--HLHKTAALLEAAAVLGAIIGGGTEEEIQKLRKY 274
Query: 302 GRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAKGNLTAPVIFALEKEPKLREIIESEFC 361
GR +GL FQ+VDDI+D T+S E+LGK A D+ LT P + LE+ ++ E + E
Sbjct: 275 GRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLERSREVAEKLRREAA 334
Query: 362 E 362
E
Sbjct: 335 E 335
>sp|Q33DR3|DLP1_MOUSE Decaprenyl-diphosphate synthase subunit 2 OS=Mus musculus GN=Pdss2
PE=1 SV=2
Length = 401
Score = 110 bits (276), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/348 (26%), Positives = 180/348 (51%), Gaps = 34/348 (9%)
Query: 96 PISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGK-RLRPALVFLVSRA 154
P S ++ +++++L + ++ +VG +P+L +A + + +LR +V L+S+A
Sbjct: 64 PASFMSLRCLLSDELSNIAMQVRKLVGTGHPLLTTARALVHDSRHNLQLRGLVVLLISKA 123
Query: 155 TAELVG---------LKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQL- 204
+ + + R LAEI E+IHTA L+H +++ S+++ + +
Sbjct: 124 AGPSTRNAACQNYDMVSGVYSCQRSLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMQ 183
Query: 205 YGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQAS------SLFDC 258
+G ++A+L+GDF+ A + LA L+N +V++L+S + D G ++ S S+ D
Sbjct: 184 FGNKIAILSGDFLLANACNGLALLQNTKVVELLSSALMDLVHGVYQENSASTKENSIPD- 242
Query: 259 DLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDF 318
D+ + + +++ +L+A S + A + D ++ ++YG+++ +S +I D+ F
Sbjct: 243 DIGISTWKEQTFLSHCALLAKSCQAAMELAKHDAAVQDMAFQYGKHMAMSHKINADLQPF 302
Query: 319 TQSAEQLGKPAASDLAKGNL-TAPVIFALE---KEPKLREIIESEFCETGSLDEAI--KL 372
K ASD NL +APV+ E ++ +++I E++ E GSL+ + +
Sbjct: 303 I-------KDKASDSKTFNLNSAPVVLHQEFLGRDLWIKQIGEAQ--EKGSLNYSKLRET 353
Query: 373 VKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 420
+K G+ A +L + N A+ L P S R ALE++V F + RF
Sbjct: 354 IKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRF 400
>sp|Q5U2R1|DLP1_RAT Decaprenyl-diphosphate synthase subunit 2 OS=Rattus norvegicus
GN=Pdss2 PE=2 SV=1
Length = 401
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 179/348 (51%), Gaps = 34/348 (9%)
Query: 96 PISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGK-RLRPALVFLVSRA 154
P S ++ +++++L + ++ +VG ++P+L +A + + +LR +V L+S+A
Sbjct: 64 PASFMSLRCLLSDELSNVAMQVRKLVGTQHPLLTTARGFVHDSRHNLQLRGLVVLLISKA 123
Query: 155 TAELVG---------LKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQL- 204
+ + + R LAEI E+IHTA L+H +++ S+++ + +
Sbjct: 124 AGPSTRNSSSQNYDMVSGIYSCQRNLAEITELIHTALLVHRGIVNLSELQSSDGPLKDMK 183
Query: 205 YGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIK------QASSLFDC 258
+G ++AVL+GDF+ A + LA L+N +V++L++ + D G + Q + + D
Sbjct: 184 FGNKIAVLSGDFLLANACNGLALLQNTKVVELLASALMDLVQGIYQENSASTQGNPIPD- 242
Query: 259 DLELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDF 318
D+ + + +++ +L+A S K A + D ++ ++YG+++ +S +I D+ F
Sbjct: 243 DIRISTWKEQTFLSHCALLAKSCKAAMELAKHDAAVQDMAFQYGKHMAMSHKINSDLQPF 302
Query: 319 TQSAEQLGKPAASDLAKGNL-TAPVIFALE---KEPKLREIIESEFCETGSLD--EAIKL 372
K ASD NL +APV+ E ++ +++I E++ E G L+ + +
Sbjct: 303 I-------KDKASDSKTFNLNSAPVVLHQEFLGRDLWIKQIGEAQ--EKGRLNYTKLRET 353
Query: 373 VKTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 420
+K G+ A +L + N A+ L P S R ALE++V F + RF
Sbjct: 354 IKAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRF 400
>sp|O04046|GGPP2_ARATH Heterodimeric geranylgeranyl pyrophosphate synthase large subunit 2
OS=Arabidopsis thaliana GN=GGPPS2 PE=1 SV=2
Length = 376
Score = 110 bits (275), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 137/253 (54%), Gaps = 24/253 (9%)
Query: 111 QTLNQNLKSIVGAENPV-LMSAAEQIFGAGGKRLRPALVFLVSRATAELVGLKELTTKHR 169
+++N+ L+ + P+ + A A GKR+RP L A+ ELVG +E
Sbjct: 94 ESVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCL----ASCELVGGQENAAMPA 149
Query: 170 RLAEIIEMIHTASLIHDDV--LDESDMRRGQETVHQLYGTRVAVLAGDFMFAQSSWYLAN 227
A +EMIHT SLI DD+ +D D+RRG+ T H++YG VA+L+G + + + ++
Sbjct: 150 ACA--VEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTT 207
Query: 228 LE-----NLEVIKLISQVI--KDFASGEIKQASS----LFDCDLELEEYLIKSYYKTASL 276
E + ++ +++ I + +G+ SS L + LE E++ +KTA L
Sbjct: 208 AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGLEHLEFI--HVHKTAVL 265
Query: 277 I-AASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQSAEQLGKPAASDLAK 335
+ A+ GA I G D + + + ++ R +GL FQ+VDDILD T+S+E+LGK A D
Sbjct: 266 LETAAVLGAIIGGGSDEEI-ESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLA 324
Query: 336 GNLTAPVIFALEK 348
G LT P + LEK
Sbjct: 325 GKLTYPKLIGLEK 337
>sp|Q86YH6|DLP1_HUMAN Decaprenyl-diphosphate synthase subunit 2 OS=Homo sapiens GN=PDSS2
PE=1 SV=2
Length = 399
Score = 109 bits (273), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 89/347 (25%), Positives = 175/347 (50%), Gaps = 33/347 (9%)
Query: 96 PISLANIFEVVAEDLQTLNQNLKSIVGAENPVLMSAAEQIFGAGGK-RLRPALVFLVSRA 154
P S ++ +++++L + ++ +VG ++P+L +A + + +LR +V L+S+A
Sbjct: 63 PTSFMSLRCLLSDELSNIAMQVRKLVGTQHPLLTTARGLVHDSWNSLQLRGLVVLLISKA 122
Query: 155 TA---------ELVGLKELTTKHRRLAEIIEMIHTASLIHDDVLDESDMRRGQETVHQL- 204
+ + + R LAEI E+IH A L+H +++ ++++ + +
Sbjct: 123 AGPSSVNTSCQNYDMVSGIYSCQRSLAEITELIHIALLVHRGIVNLNELQSSDGPLKDMQ 182
Query: 205 YGTRVAVLAGDFMFAQSSWYLANLENLEVIKLISQVIKDFASGEIKQAS----SLFDCDL 260
+G ++A+L+GDF+ A + LA L+N +V++L++ + D G + S S D+
Sbjct: 183 FGNKIAILSGDFLLANACNGLALLQNTKVVELLASALMDLVQGVYHENSTSKESYITDDI 242
Query: 261 ELEEYLIKSYYKTASLIAASTKGAAIFSGVDGSLSKQMYEYGRNLGLSFQIVDDILDFTQ 320
+ + +++ +L+A S + A + D + ++YG+++ +S +I D+ F
Sbjct: 243 GISTWKEQTFLSHGALLAKSCQAAMELAKHDAEVQNMAFQYGKHMAMSHKINSDVQPFI- 301
Query: 321 SAEQLGKPAASDLAKGNL-TAPVIFALE---KEPKLREIIESEFCETGSLDEAIKL---V 373
K SD NL +APV+ E ++ +++I E++ E G LD A KL +
Sbjct: 302 ------KEKTSDSMTFNLNSAPVVLHQEFLGRDLWIKQIGEAQ--EKGRLDYA-KLRERI 352
Query: 374 KTSGGIEEAQELAKEKANLAIHNLHCLPRSPFRVALEDMVMFNLERF 420
K G+ A +L + N A+ L P S R ALE++V F + RF
Sbjct: 353 KAGKGVTSAIDLCRYHGNKALEALESFPPSEARSALENIV-FAVTRF 398
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 141,068,072
Number of Sequences: 539616
Number of extensions: 5557309
Number of successful extensions: 17416
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 56
Number of HSP's that attempted gapping in prelim test: 17134
Number of HSP's gapped (non-prelim): 154
length of query: 421
length of database: 191,569,459
effective HSP length: 120
effective length of query: 301
effective length of database: 126,815,539
effective search space: 38171477239
effective search space used: 38171477239
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)