Query 014628
Match_columns 421
No_of_seqs 513 out of 1300
Neff 11.5
Searched_HMMs 46136
Date Fri Mar 29 06:59:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014628.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014628hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2271 UhpC Sugar phosphate p 100.0 1.2E-37 2.5E-42 265.0 23.0 352 2-383 75-431 (448)
2 COG2814 AraJ Arabinose efflux 100.0 2E-35 4.3E-40 255.2 29.7 323 2-383 59-383 (394)
3 PRK10642 proline/glycine betai 100.0 1.3E-35 2.9E-40 276.6 29.3 334 2-379 68-423 (490)
4 PRK11663 regulatory protein Uh 100.0 4.2E-35 9.1E-40 269.4 30.3 351 2-382 69-420 (434)
5 PRK03545 putative arabinose tr 100.0 1E-34 2.2E-39 263.9 31.0 321 2-382 55-376 (390)
6 TIGR00903 2A0129 major facilit 100.0 4.3E-35 9.3E-40 261.4 27.1 325 2-382 37-361 (368)
7 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.4E-35 7.4E-40 267.8 25.8 348 2-374 54-409 (412)
8 TIGR01299 synapt_SV2 synaptic 100.0 7.2E-35 1.6E-39 276.3 28.6 371 2-383 213-731 (742)
9 PRK10406 alpha-ketoglutarate t 100.0 1.5E-34 3.2E-39 265.8 29.9 324 3-382 75-420 (432)
10 PRK09556 uhpT sugar phosphate 100.0 3.8E-35 8.3E-40 272.3 26.3 348 2-383 75-446 (467)
11 KOG1330 Sugar transporter/spin 100.0 3E-36 6.5E-41 258.8 14.2 326 2-365 79-417 (493)
12 PRK09952 shikimate transporter 100.0 5.6E-34 1.2E-38 261.9 30.0 333 2-383 75-430 (438)
13 TIGR00893 2A0114 d-galactonate 100.0 8.1E-34 1.8E-38 259.6 29.1 352 2-382 40-395 (399)
14 PRK11551 putative 3-hydroxyphe 100.0 1.4E-33 3.1E-38 258.2 29.0 328 2-379 61-389 (406)
15 TIGR00887 2A0109 phosphate:H+ 100.0 9.5E-34 2.1E-38 265.2 28.0 369 2-397 67-498 (502)
16 PRK11273 glpT sn-glycerol-3-ph 100.0 2.2E-33 4.8E-38 259.4 29.7 353 2-385 74-434 (452)
17 TIGR00892 2A0113 monocarboxyla 100.0 8E-34 1.7E-38 261.8 25.6 353 3-385 66-420 (455)
18 PRK09705 cynX putative cyanate 100.0 5.8E-33 1.3E-37 251.9 29.0 319 2-382 55-377 (393)
19 TIGR00900 2A0121 H+ Antiporter 100.0 8.3E-33 1.8E-37 249.9 27.6 313 2-362 45-365 (365)
20 TIGR00898 2A0119 cation transp 100.0 6.1E-33 1.3E-37 261.0 26.7 352 2-382 138-491 (505)
21 TIGR00894 2A0114euk Na(+)-depe 100.0 7.1E-33 1.5E-37 257.6 26.2 347 2-381 87-445 (465)
22 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-32 2.5E-37 250.1 26.6 322 2-377 49-373 (377)
23 PLN00028 nitrate transmembrane 100.0 1.6E-32 3.4E-37 254.5 27.2 337 2-385 82-432 (476)
24 PRK10213 nepI ribonucleoside t 100.0 1E-31 2.2E-36 243.5 31.3 312 2-374 66-379 (394)
25 PRK15075 citrate-proton sympor 100.0 5.9E-32 1.3E-36 248.7 29.4 306 5-363 70-397 (434)
26 PRK10091 MFS transport protein 100.0 9.7E-32 2.1E-36 243.4 29.9 322 2-383 49-373 (382)
27 PRK10489 enterobactin exporter 100.0 5.8E-32 1.3E-36 248.0 27.9 322 2-377 63-390 (417)
28 PRK10077 xylE D-xylose transpo 100.0 2.7E-32 5.8E-37 255.3 26.0 350 2-379 66-450 (479)
29 TIGR00881 2A0104 phosphoglycer 100.0 2.4E-32 5.1E-37 248.2 23.6 333 2-366 41-377 (379)
30 PRK03699 putative transporter; 100.0 2.5E-31 5.4E-36 241.7 30.2 324 2-385 53-379 (394)
31 PRK15402 multidrug efflux syst 100.0 4.7E-31 1E-35 241.3 30.8 310 2-364 59-374 (406)
32 PRK12307 putative sialic acid 100.0 1.6E-31 3.6E-36 246.2 28.0 316 2-362 64-385 (426)
33 TIGR00891 2A0112 putative sial 100.0 1.3E-31 2.9E-36 245.5 26.4 337 2-370 58-400 (405)
34 PRK11646 multidrug resistance 100.0 5.7E-31 1.2E-35 239.1 30.0 302 4-362 59-361 (400)
35 PRK14995 methyl viologen resis 100.0 1.7E-31 3.8E-36 249.1 26.3 342 2-360 52-413 (495)
36 KOG2532 Permease of the major 100.0 7.6E-32 1.7E-36 243.4 22.9 349 2-383 84-444 (466)
37 TIGR00712 glpT glycerol-3-phos 100.0 3.8E-31 8.2E-36 243.7 28.0 350 2-383 72-430 (438)
38 TIGR00879 SP MFS transporter, 100.0 1.1E-31 2.4E-36 251.7 24.1 364 2-382 82-466 (481)
39 TIGR00883 2A0106 metabolite-pr 100.0 3.1E-31 6.7E-36 242.2 25.9 318 4-373 48-388 (394)
40 PRK05122 major facilitator sup 100.0 1.1E-30 2.4E-35 238.5 28.9 316 2-382 62-385 (399)
41 PRK15403 multidrug efflux syst 100.0 2.4E-30 5.1E-35 235.9 30.2 319 2-374 62-385 (413)
42 TIGR00899 2A0120 sugar efflux 100.0 1.8E-30 3.8E-35 235.5 29.3 322 3-382 45-370 (375)
43 PRK09874 drug efflux system pr 100.0 1.5E-30 3.3E-35 238.6 29.1 325 2-382 65-394 (408)
44 KOG2533 Permease of the major 100.0 1.3E-31 2.7E-36 242.4 21.3 323 2-353 92-423 (495)
45 PF07690 MFS_1: Major Facilita 100.0 1.9E-31 4.1E-36 239.8 22.5 305 2-351 43-352 (352)
46 PRK11195 lysophospholipid tran 100.0 2.3E-30 4.9E-35 234.6 29.4 331 2-387 49-381 (393)
47 PRK15034 nitrate/nitrite trans 100.0 5.9E-30 1.3E-34 229.6 31.3 321 2-383 81-451 (462)
48 TIGR00710 efflux_Bcr_CflA drug 100.0 2.5E-30 5.3E-35 235.4 29.5 304 2-359 51-360 (385)
49 KOG0569 Permease of the major 100.0 8.6E-31 1.9E-35 233.6 25.6 378 2-403 71-470 (485)
50 PRK10504 putative transporter; 100.0 2.7E-30 5.8E-35 241.0 28.8 343 2-362 56-417 (471)
51 PRK10473 multidrug efflux syst 100.0 5.6E-30 1.2E-34 233.2 30.2 301 2-362 49-351 (392)
52 TIGR00711 efflux_EmrB drug res 100.0 3.4E-31 7.4E-36 248.4 22.0 342 2-360 48-410 (485)
53 TIGR00897 2A0118 polyol permea 100.0 1.3E-29 2.9E-34 230.9 31.0 327 2-382 59-397 (402)
54 COG2223 NarK Nitrate/nitrite t 100.0 7.1E-30 1.5E-34 218.1 27.0 322 5-383 63-398 (417)
55 PRK03893 putative sialic acid 100.0 3.7E-30 8.1E-35 241.8 27.4 349 2-373 66-440 (496)
56 TIGR00895 2A0115 benzoate tran 100.0 1.9E-30 4.1E-35 237.4 23.1 334 2-357 63-397 (398)
57 PRK12382 putative transporter; 100.0 1.2E-29 2.6E-34 231.0 27.7 317 2-383 62-386 (392)
58 PRK11102 bicyclomycin/multidru 100.0 3.2E-29 6.9E-34 227.3 29.7 302 2-354 37-343 (377)
59 PRK03633 putative MFS family t 100.0 3.6E-29 7.8E-34 226.7 28.1 312 2-378 52-364 (381)
60 PRK11010 ampG muropeptide tran 100.0 1.3E-28 2.8E-33 228.7 31.4 325 6-383 60-400 (491)
61 PRK10133 L-fucose transporter; 100.0 1.1E-28 2.3E-33 226.1 30.2 316 2-372 72-419 (438)
62 cd06174 MFS The Major Facilita 100.0 6.9E-29 1.5E-33 223.1 28.1 302 2-382 45-348 (352)
63 KOG2504 Monocarboxylate transp 100.0 2.4E-29 5.3E-34 230.1 24.4 372 5-386 95-476 (509)
64 PRK15011 sugar efflux transpor 100.0 2.6E-28 5.6E-33 221.8 29.5 320 3-382 64-387 (393)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 2.9E-28 6.3E-33 221.3 29.7 314 2-373 49-399 (410)
66 PRK11043 putative transporter; 100.0 3.4E-28 7.4E-33 222.1 29.5 303 2-360 52-357 (401)
67 PRK06814 acylglycerophosphoeth 100.0 8.2E-29 1.8E-33 254.2 27.6 323 2-373 63-409 (1140)
68 PF05977 MFS_3: Transmembrane 100.0 6.7E-28 1.5E-32 221.8 30.2 328 3-382 57-390 (524)
69 PRK11652 emrD multidrug resist 100.0 5.3E-28 1.2E-32 220.3 28.6 303 2-360 54-360 (394)
70 PRK10054 putative transporter; 100.0 2.3E-28 5.1E-33 221.6 25.8 312 2-371 54-369 (395)
71 TIGR00896 CynX cyanate transpo 100.0 6.4E-28 1.4E-32 216.6 27.7 305 2-366 46-354 (355)
72 TIGR00902 2A0127 phenyl propri 100.0 6.4E-28 1.4E-32 218.4 27.6 316 3-378 51-371 (382)
73 TIGR00805 oat sodium-independe 100.0 7.4E-28 1.6E-32 228.3 28.7 336 2-361 79-582 (633)
74 PRK08633 2-acyl-glycerophospho 100.0 5.6E-28 1.2E-32 249.1 29.8 312 2-359 58-383 (1146)
75 TIGR00886 2A0108 nitrite extru 100.0 8.6E-28 1.9E-32 217.1 25.1 300 2-344 48-364 (366)
76 KOG0254 Predicted transporter 100.0 4.1E-28 8.8E-33 227.2 22.2 379 2-403 100-499 (513)
77 KOG0253 Synaptic vesicle trans 100.0 1.6E-27 3.5E-32 198.4 22.4 362 2-383 124-516 (528)
78 KOG3764 Vesicular amine transp 100.0 5.5E-28 1.2E-32 203.6 18.1 325 4-383 119-451 (464)
79 KOG0255 Synaptic vesicle trans 100.0 4E-27 8.8E-32 221.9 24.9 336 1-359 128-467 (521)
80 PRK11128 putative 3-phenylprop 100.0 1.3E-26 2.8E-31 209.9 27.2 313 2-374 50-367 (382)
81 PRK11902 ampG muropeptide tran 100.0 6.6E-26 1.4E-30 206.8 31.2 316 6-378 47-382 (402)
82 PF00083 Sugar_tr: Sugar (and 100.0 2.6E-33 5.6E-38 260.0 -18.9 372 1-400 56-449 (451)
83 TIGR00901 2A0125 AmpG-related 100.0 6.1E-26 1.3E-30 204.0 27.3 284 8-342 38-354 (356)
84 PRK09528 lacY galactoside perm 100.0 1.9E-26 4.2E-31 211.6 24.0 330 2-382 57-399 (420)
85 TIGR00889 2A0110 nucleoside tr 100.0 1.1E-25 2.4E-30 205.3 27.6 324 2-382 49-398 (418)
86 KOG0252 Inorganic phosphate tr 99.9 6.3E-28 1.4E-32 206.9 11.0 376 2-402 95-512 (538)
87 KOG2615 Permease of the major 99.9 1.4E-26 2.9E-31 194.1 18.6 343 2-374 79-428 (451)
88 TIGR00792 gph sugar (Glycoside 99.9 5.4E-26 1.2E-30 210.3 24.5 309 3-362 47-382 (437)
89 COG0738 FucP Fucose permease [ 99.9 2.8E-25 6.1E-30 188.7 26.1 306 2-364 59-388 (422)
90 TIGR00882 2A0105 oligosacchari 99.9 1.9E-25 4.2E-30 203.5 25.5 328 2-380 49-389 (396)
91 TIGR00806 rfc RFC reduced fola 99.9 3.4E-25 7.5E-30 194.9 24.2 325 2-344 73-400 (511)
92 PRK10207 dipeptide/tripeptide 99.9 1.3E-24 2.8E-29 200.9 27.6 343 6-357 65-438 (489)
93 TIGR00924 yjdL_sub1_fam amino 99.9 4.1E-24 8.8E-29 197.6 29.2 373 3-380 60-462 (475)
94 PF06609 TRI12: Fungal trichot 99.9 5.8E-24 1.3E-28 194.9 27.3 345 2-358 89-465 (599)
95 COG2807 CynX Cyanate permease 99.9 1.1E-23 2.4E-28 176.3 26.0 319 2-381 58-380 (395)
96 TIGR02718 sider_RhtX_FptX side 99.9 1.4E-22 3E-27 184.3 28.3 316 6-378 53-383 (390)
97 PF11700 ATG22: Vacuole efflux 99.9 6.2E-22 1.3E-26 180.6 31.6 337 4-383 83-465 (477)
98 PTZ00207 hypothetical protein; 99.9 7.5E-23 1.6E-27 189.0 23.0 372 6-383 76-549 (591)
99 PRK09584 tppB putative tripept 99.9 1.4E-21 3E-26 181.9 29.6 333 7-353 73-437 (500)
100 TIGR01272 gluP glucose/galacto 99.9 2.7E-21 5.9E-26 168.6 26.7 275 39-370 5-299 (310)
101 KOG3626 Organic anion transpor 99.9 5.1E-21 1.1E-25 176.7 28.0 336 2-361 143-650 (735)
102 PRK09669 putative symporter Ya 99.9 3.9E-21 8.6E-26 177.6 23.9 305 4-362 58-390 (444)
103 PRK10429 melibiose:sodium symp 99.9 8E-21 1.7E-25 176.6 23.3 309 5-362 56-395 (473)
104 TIGR01301 GPH_sucrose GPH fami 99.9 1.1E-19 2.3E-24 164.8 29.0 342 3-382 51-467 (477)
105 PRK15462 dipeptide/tripeptide 99.9 2.9E-19 6.2E-24 162.8 30.4 125 4-129 58-186 (493)
106 PF13347 MFS_2: MFS/sugar tran 99.9 2.4E-20 5.2E-25 171.5 22.5 306 5-362 51-386 (428)
107 PF03825 Nuc_H_symport: Nucleo 99.9 1.2E-19 2.5E-24 162.8 25.9 307 3-362 49-366 (400)
108 COG2270 Permeases of the major 99.9 5.4E-20 1.2E-24 157.9 21.8 333 4-383 71-426 (438)
109 TIGR00788 fbt folate/biopterin 99.9 1.2E-20 2.7E-25 174.0 18.5 345 8-390 77-447 (468)
110 KOG4686 Predicted sugar transp 99.9 1E-19 2.2E-24 146.8 19.5 320 5-374 93-428 (459)
111 PRK11462 putative transporter; 99.8 1.1E-18 2.4E-23 161.1 26.4 303 5-362 59-389 (460)
112 PF03137 OATP: Organic Anion T 99.8 1.4E-22 3.1E-27 187.4 -0.2 342 2-361 49-515 (539)
113 PRK09848 glucuronide transport 99.8 6.1E-19 1.3E-23 163.3 23.6 304 4-362 57-390 (448)
114 PF01306 LacY_symp: LacY proto 99.8 4.3E-18 9.2E-23 149.7 24.0 328 4-381 56-395 (412)
115 COG3104 PTR2 Dipeptide/tripept 99.8 1.2E-16 2.7E-21 140.6 22.9 374 6-382 76-483 (498)
116 COG2211 MelB Na+/melibiose sym 99.8 2.8E-16 6.1E-21 139.6 24.7 308 5-362 62-398 (467)
117 KOG2563 Permease of the major 99.8 4.2E-17 9.1E-22 141.0 18.3 312 4-362 92-423 (480)
118 PF03209 PUCC: PUCC protein; 99.7 2.1E-14 4.6E-19 124.2 27.2 306 6-361 29-364 (403)
119 TIGR00880 2_A_01_02 Multidrug 99.7 1.6E-16 3.5E-21 122.5 11.8 132 2-133 9-140 (141)
120 KOG2816 Predicted transporter 99.7 2.2E-15 4.7E-20 136.3 19.5 314 4-361 75-393 (463)
121 PF01770 Folate_carrier: Reduc 99.6 3.8E-13 8.2E-18 118.0 25.1 327 4-342 54-385 (412)
122 PF03092 BT1: BT1 family; Int 99.6 1.1E-13 2.4E-18 126.3 16.5 318 7-362 40-382 (433)
123 TIGR01299 synapt_SV2 synaptic 99.5 4.8E-14 1E-18 135.1 11.1 132 2-135 606-737 (742)
124 TIGR00889 2A0110 nucleoside tr 99.5 8.6E-14 1.9E-18 127.3 11.6 131 4-134 264-405 (418)
125 KOG2325 Predicted transporter/ 99.5 7.2E-13 1.6E-17 118.4 14.9 336 2-382 82-471 (488)
126 PRK10054 putative transporter; 99.5 2.4E-12 5.3E-17 117.1 18.3 168 204-379 7-175 (395)
127 PRK10642 proline/glycine betai 99.5 5.7E-13 1.2E-17 124.8 13.4 136 2-138 297-436 (490)
128 PRK05122 major facilitator sup 99.5 4.9E-13 1.1E-17 122.3 12.0 129 3-131 261-389 (399)
129 PRK11663 regulatory protein Uh 99.4 6.8E-12 1.5E-16 115.8 18.4 167 204-378 23-190 (434)
130 TIGR00900 2A0121 H+ Antiporter 99.4 3.1E-12 6.8E-17 115.6 13.8 162 210-378 5-171 (365)
131 PRK12382 putative transporter; 99.4 1.1E-12 2.4E-17 119.7 10.6 128 3-130 261-388 (392)
132 PRK09874 drug efflux system pr 99.4 1.1E-12 2.4E-17 120.5 10.6 128 4-131 271-398 (408)
133 PRK09528 lacY galactoside perm 99.4 6.8E-13 1.5E-17 122.1 9.1 129 3-131 274-403 (420)
134 COG2271 UhpC Sugar phosphate p 99.4 6.2E-12 1.3E-16 108.7 13.4 174 202-383 27-203 (448)
135 PF05631 DUF791: Protein of un 99.4 4.3E-11 9.2E-16 102.3 18.3 215 3-265 81-304 (354)
136 TIGR00924 yjdL_sub1_fam amino 99.4 1.1E-11 2.3E-16 115.3 15.9 170 204-380 10-186 (475)
137 PRK15462 dipeptide/tripeptide 99.4 1.9E-11 4.2E-16 112.0 17.2 174 203-383 8-186 (493)
138 PF07690 MFS_1: Major Facilita 99.4 8.6E-12 1.9E-16 112.1 14.8 163 212-381 4-167 (352)
139 PRK10489 enterobactin exporter 99.4 1E-11 2.2E-16 114.3 15.4 175 195-377 8-188 (417)
140 PRK11646 multidrug resistance 99.4 3.3E-11 7.2E-16 109.9 16.7 164 207-378 13-177 (400)
141 TIGR00891 2A0112 putative sial 99.3 3.6E-11 7.7E-16 110.3 16.1 162 204-372 12-175 (405)
142 TIGR00893 2A0114 d-galactonate 99.3 1.5E-11 3.2E-16 112.4 13.1 153 221-381 11-164 (399)
143 TIGR00712 glpT glycerol-3-phos 99.3 5.2E-11 1.1E-15 110.2 16.6 170 203-380 26-200 (438)
144 PRK09584 tppB putative tripept 99.3 1E-10 2.2E-15 109.4 18.3 176 200-382 16-197 (500)
145 PRK10504 putative transporter; 99.3 7.6E-11 1.6E-15 110.4 17.4 168 204-379 10-178 (471)
146 cd06174 MFS The Major Facilita 99.3 7.7E-12 1.7E-16 112.3 10.1 127 2-128 222-349 (352)
147 PRK03699 putative transporter; 99.3 1.4E-10 3E-15 105.8 18.2 169 204-379 7-176 (394)
148 COG2814 AraJ Arabinose efflux 99.3 8E-11 1.7E-15 103.1 15.5 176 204-389 13-189 (394)
149 TIGR00881 2A0104 phosphoglycer 99.3 1.6E-11 3.4E-16 111.6 11.8 158 214-379 5-164 (379)
150 PRK10207 dipeptide/tripeptide 99.3 8.7E-11 1.9E-15 109.3 16.8 171 203-380 13-188 (489)
151 PRK15011 sugar efflux transpor 99.3 2E-11 4.3E-16 111.3 12.3 125 5-130 266-390 (393)
152 TIGR02332 HpaX 4-hydroxyphenyl 99.3 5E-11 1.1E-15 109.2 14.8 165 207-378 11-181 (412)
153 TIGR00895 2A0115 benzoate tran 99.3 1.7E-11 3.7E-16 112.2 11.4 153 217-377 30-183 (398)
154 PRK11195 lysophospholipid tran 99.3 1E-10 2.2E-15 106.4 16.1 147 204-360 3-150 (393)
155 TIGR00710 efflux_Bcr_CflA drug 99.3 7.1E-11 1.5E-15 107.6 15.1 155 218-380 19-174 (385)
156 TIGR00886 2A0108 nitrite extru 99.3 1.6E-10 3.4E-15 104.5 17.1 147 206-359 3-151 (366)
157 PRK10473 multidrug efflux syst 99.3 1.2E-10 2.5E-15 106.4 15.5 163 210-380 9-172 (392)
158 PRK10091 MFS transport protein 99.3 1.7E-10 3.6E-15 104.9 16.1 168 204-379 3-171 (382)
159 TIGR00711 efflux_EmrB drug res 99.3 1.6E-10 3.5E-15 108.7 16.6 163 209-379 7-170 (485)
160 PRK03545 putative arabinose tr 99.3 1.3E-10 2.8E-15 105.9 15.3 147 225-379 30-177 (390)
161 KOG3098 Uncharacterized conser 99.3 4.7E-09 1E-13 94.1 24.5 300 4-351 63-405 (461)
162 PRK10213 nepI ribonucleoside t 99.3 2.4E-10 5.3E-15 104.0 16.8 144 224-375 40-184 (394)
163 PRK12307 putative sialic acid 99.3 2.3E-10 5.1E-15 105.7 16.8 158 206-371 20-178 (426)
164 PRK14995 methyl viologen resis 99.3 2.9E-10 6.3E-15 106.7 17.5 166 206-379 8-175 (495)
165 PF02487 CLN3: CLN3 protein; 99.3 9.1E-10 2E-14 97.0 19.3 308 6-351 74-388 (402)
166 PF06963 FPN1: Ferroportin1 (F 99.3 8.4E-09 1.8E-13 92.7 25.6 320 4-344 51-403 (432)
167 PRK11551 putative 3-hydroxyphe 99.2 3.1E-10 6.8E-15 104.1 16.4 156 213-376 24-180 (406)
168 PRK11043 putative transporter; 99.2 5.4E-10 1.2E-14 102.4 17.3 156 218-380 17-175 (401)
169 PF05977 MFS_3: Transmembrane 99.2 6.7E-10 1.5E-14 103.3 17.8 174 200-380 6-184 (524)
170 TIGR00892 2A0113 monocarboxyla 99.2 1.7E-11 3.7E-16 113.6 7.2 123 3-125 288-415 (455)
171 KOG1330 Sugar transporter/spin 99.2 8.2E-11 1.8E-15 102.9 10.6 154 232-391 60-214 (493)
172 PRK11273 glpT sn-glycerol-3-ph 99.2 9.6E-10 2.1E-14 102.1 18.5 147 223-378 48-200 (452)
173 TIGR00899 2A0120 sugar efflux 99.2 9.9E-11 2.1E-15 106.2 11.6 123 5-128 249-371 (375)
174 PRK03893 putative sialic acid 99.2 6.3E-10 1.4E-14 105.0 16.9 158 205-370 21-179 (496)
175 TIGR00879 SP MFS transporter, 99.2 7.1E-11 1.5E-15 110.9 10.3 132 3-134 331-473 (481)
176 PLN00028 nitrate transmembrane 99.2 1.5E-09 3.3E-14 101.2 18.9 153 221-381 53-214 (476)
177 TIGR00897 2A0118 polyol permea 99.2 7.8E-10 1.7E-14 101.2 16.0 153 203-362 12-170 (402)
178 PRK11102 bicyclomycin/multidru 99.2 2.8E-10 6E-15 103.4 13.0 150 222-379 9-159 (377)
179 TIGR00890 2A0111 Oxalate/Forma 99.2 5E-10 1.1E-14 101.6 14.7 153 220-381 19-172 (377)
180 PRK15034 nitrate/nitrite trans 99.2 1.1E-09 2.4E-14 99.4 16.3 147 203-356 33-185 (462)
181 PRK03633 putative MFS family t 99.2 9.8E-10 2.1E-14 99.8 15.9 151 203-360 5-156 (381)
182 KOG2615 Permease of the major 99.2 2.2E-10 4.9E-15 97.5 10.6 141 243-390 72-215 (451)
183 TIGR00902 2A0127 phenyl propri 99.2 2.1E-10 4.6E-15 104.1 11.4 122 3-126 252-374 (382)
184 PRK11652 emrD multidrug resist 99.2 1.4E-09 3.1E-14 99.3 16.8 151 219-377 23-174 (394)
185 TIGR00903 2A0129 major facilit 99.1 1.3E-09 2.9E-14 97.8 15.1 153 219-380 6-159 (368)
186 PRK10077 xylE D-xylose transpo 99.1 1.8E-10 3.8E-15 108.2 9.4 131 4-134 319-460 (479)
187 PRK15402 multidrug efflux syst 99.1 3E-09 6.5E-14 97.6 16.7 147 225-379 34-181 (406)
188 PRK09705 cynX putative cyanate 99.1 2.7E-09 5.8E-14 97.3 16.2 146 221-374 26-172 (393)
189 PRK15403 multidrug efflux syst 99.1 2.8E-09 6.1E-14 97.7 16.1 141 232-379 43-184 (413)
190 TIGR00769 AAA ADP/ATP carrier 99.1 4.4E-07 9.4E-12 82.8 29.6 226 7-269 60-333 (472)
191 TIGR00882 2A0105 oligosacchari 99.1 2.4E-09 5.2E-14 97.8 15.4 168 203-380 1-177 (396)
192 TIGR00898 2A0119 cation transp 99.1 4.7E-10 1E-14 106.0 10.8 128 5-135 369-498 (505)
193 TIGR00885 fucP L-fucose:H+ sym 99.1 4.9E-09 1.1E-13 95.8 16.8 145 207-358 6-154 (410)
194 TIGR00806 rfc RFC reduced fola 99.1 1.2E-08 2.6E-13 91.3 18.4 129 225-362 47-177 (511)
195 KOG3810 Micronutrient transpor 99.1 3E-09 6.6E-14 89.4 13.3 310 4-340 55-369 (433)
196 PRK09556 uhpT sugar phosphate 99.1 1.3E-09 2.8E-14 101.8 12.6 150 222-378 47-204 (467)
197 TIGR00887 2A0109 phosphate:H+ 99.1 3.8E-09 8.3E-14 99.5 15.6 110 243-358 60-175 (502)
198 KOG3762 Predicted transporter 99.0 8.5E-09 1.8E-13 92.1 15.3 187 194-386 361-547 (618)
199 TIGR00880 2_A_01_02 Multidrug 99.0 3.2E-09 7E-14 81.4 11.0 126 247-379 6-131 (141)
200 PRK10133 L-fucose transporter; 99.0 2.1E-08 4.5E-13 92.5 17.9 145 207-358 29-177 (438)
201 TIGR00883 2A0106 metabolite-pr 99.0 7E-10 1.5E-14 101.3 8.2 118 3-120 267-390 (394)
202 TIGR00894 2A0114euk Na(+)-depe 99.0 2.2E-09 4.9E-14 100.3 11.5 142 235-382 71-215 (465)
203 PF11700 ATG22: Vacuole efflux 99.0 3.9E-09 8.4E-14 97.1 12.2 128 3-130 329-467 (477)
204 PRK11902 ampG muropeptide tran 99.0 2.1E-08 4.5E-13 91.8 16.9 159 213-378 8-174 (402)
205 PRK06814 acylglycerophosphoeth 99.0 1.4E-08 3E-13 105.6 17.4 163 199-368 6-177 (1140)
206 PRK09952 shikimate transporter 99.0 1.9E-08 4.2E-13 93.0 16.5 162 207-374 25-208 (438)
207 PRK08633 2-acyl-glycerophospho 99.0 1.3E-08 2.8E-13 106.1 17.0 155 200-360 5-165 (1146)
208 PTZ00207 hypothetical protein; 99.0 2.4E-08 5.3E-13 93.5 16.2 154 219-383 42-202 (591)
209 KOG3764 Vesicular amine transp 99.0 9.6E-09 2.1E-13 88.4 12.2 133 244-383 111-244 (464)
210 TIGR00792 gph sugar (Glycoside 99.0 2.8E-09 6E-14 98.9 9.9 108 2-109 268-383 (437)
211 PF06609 TRI12: Fungal trichot 99.0 4.5E-08 9.8E-13 91.2 17.6 152 225-385 65-216 (599)
212 PRK11128 putative 3-phenylprop 99.0 4.9E-09 1.1E-13 95.3 11.3 118 3-122 252-370 (382)
213 PRK11010 ampG muropeptide tran 99.0 5.9E-08 1.3E-12 90.9 18.4 172 201-379 9-188 (491)
214 KOG4332 Predicted sugar transp 99.0 6.3E-08 1.4E-12 78.7 15.6 288 4-344 85-391 (454)
215 PRK10406 alpha-ketoglutarate t 98.9 4.7E-08 1E-12 90.4 16.5 123 246-375 70-208 (432)
216 TIGR01301 GPH_sucrose GPH fami 98.9 3.3E-08 7.1E-13 90.6 14.9 142 209-357 9-175 (477)
217 TIGR00926 2A1704 Peptide:H+ sy 98.9 5.7E-07 1.2E-11 86.0 23.2 125 6-130 38-181 (654)
218 COG2223 NarK Nitrate/nitrite t 98.9 1.9E-08 4.1E-13 87.6 12.0 167 204-379 14-186 (417)
219 PRK15075 citrate-proton sympor 98.9 4.8E-08 1E-12 90.4 15.7 159 205-371 16-197 (434)
220 TIGR02718 sider_RhtX_FptX side 98.9 1.3E-08 2.8E-13 92.8 11.0 122 4-125 257-385 (390)
221 KOG0253 Synaptic vesicle trans 98.9 5.6E-09 1.2E-13 88.8 7.6 124 6-131 396-519 (528)
222 TIGR00805 oat sodium-independe 98.9 1.6E-08 3.4E-13 97.1 11.0 126 230-361 58-235 (633)
223 PF01306 LacY_symp: LacY proto 98.8 2.3E-08 5.1E-13 88.8 10.4 128 6-133 274-402 (412)
224 TIGR00901 2A0125 AmpG-related 98.8 7.3E-08 1.6E-12 86.8 13.5 148 223-377 7-169 (356)
225 TIGR00896 CynX cyanate transpo 98.8 1.1E-07 2.4E-12 85.5 14.6 141 224-373 20-162 (355)
226 COG3104 PTR2 Dipeptide/tripept 98.8 4.6E-08 9.9E-13 87.3 10.5 177 203-386 20-206 (498)
227 KOG0637 Sucrose transporter an 98.8 2.3E-07 4.9E-12 81.6 14.5 99 5-103 81-202 (498)
228 KOG3762 Predicted transporter 98.8 2.6E-08 5.7E-13 89.0 8.4 130 2-131 417-547 (618)
229 COG2270 Permeases of the major 98.7 4.5E-08 9.7E-13 85.4 8.2 116 4-119 301-417 (438)
230 PF03825 Nuc_H_symport: Nucleo 98.7 1.4E-07 3.1E-12 85.2 11.4 127 6-132 258-396 (400)
231 COG0477 ProP Permeases of the 98.7 9E-08 1.9E-12 84.4 10.1 120 3-122 51-176 (338)
232 PRK09848 glucuronide transport 98.7 8.8E-08 1.9E-12 89.0 9.2 107 3-109 276-391 (448)
233 KOG0569 Permease of the major 98.7 4.3E-07 9.4E-12 82.5 13.0 130 5-135 319-458 (485)
234 KOG2532 Permease of the major 98.6 2.9E-07 6.2E-12 84.4 11.5 136 243-384 77-214 (466)
235 COG0738 FucP Fucose permease [ 98.6 2.2E-06 4.8E-11 74.6 15.9 128 227-360 35-166 (422)
236 KOG0255 Synaptic vesicle trans 98.6 1.3E-07 2.8E-12 89.8 9.2 129 243-381 122-250 (521)
237 TIGR01272 gluP glucose/galacto 98.6 2.2E-07 4.7E-12 81.4 9.6 114 2-118 189-302 (310)
238 PRK09669 putative symporter Ya 98.6 1.2E-06 2.5E-11 81.5 14.8 149 210-359 15-171 (444)
239 PF06813 Nodulin-like: Nodulin 98.6 5E-06 1.1E-10 69.2 16.7 127 3-131 49-182 (250)
240 PF03219 TLC: TLC ATP/ADP tran 98.6 7.8E-05 1.7E-09 68.7 25.9 229 5-269 73-349 (491)
241 PRK11462 putative transporter; 98.6 2.7E-06 5.7E-11 79.2 16.4 152 210-362 15-174 (460)
242 KOG2533 Permease of the major 98.6 6.2E-07 1.3E-11 82.5 11.3 135 243-383 85-224 (495)
243 PRK10429 melibiose:sodium symp 98.6 2.1E-06 4.6E-11 80.4 15.2 147 210-357 12-166 (473)
244 KOG2504 Monocarboxylate transp 98.5 2E-06 4.3E-11 80.0 13.5 149 226-383 68-218 (509)
245 TIGR00788 fbt folate/biopterin 98.5 6.2E-07 1.3E-11 83.4 9.5 106 3-108 300-415 (468)
246 PF13347 MFS_2: MFS/sugar tran 98.5 1E-06 2.2E-11 81.4 10.9 144 214-362 11-168 (428)
247 PF00854 PTR2: POT family; In 98.5 3.1E-06 6.8E-11 76.5 13.8 109 22-130 2-122 (372)
248 COG2211 MelB Na+/melibiose sym 98.5 8E-06 1.7E-10 73.8 15.4 154 208-362 16-177 (467)
249 KOG3574 Acetyl-CoA transporter 98.5 3.8E-05 8.2E-10 66.3 18.2 304 9-361 81-432 (510)
250 PF00083 Sugar_tr: Sugar (and 98.4 1.2E-08 2.7E-13 95.0 -3.2 126 243-375 50-181 (451)
251 PF13000 Acatn: Acetyl-coenzym 98.4 0.00036 7.8E-09 62.9 23.9 57 304-361 412-468 (544)
252 KOG0254 Predicted transporter 98.4 2.8E-06 6E-11 80.4 11.7 131 242-379 92-223 (513)
253 KOG4686 Predicted sugar transp 98.3 4.6E-06 9.9E-11 68.9 9.8 120 5-126 314-438 (459)
254 KOG1237 H+/oligopeptide sympor 98.3 0.00013 2.8E-09 68.8 19.2 125 6-130 88-244 (571)
255 PF05978 UNC-93: Ion channel r 98.3 6.1E-06 1.3E-10 63.2 8.7 99 4-103 50-148 (156)
256 COG3202 ATP/ADP translocase [E 98.3 0.0026 5.6E-08 57.4 26.1 230 4-269 75-352 (509)
257 PF06813 Nodulin-like: Nodulin 98.2 2.1E-05 4.6E-10 65.5 11.8 133 218-359 16-156 (250)
258 COG2807 CynX Cyanate permease 98.2 6.6E-05 1.4E-09 64.7 14.1 150 225-383 33-183 (395)
259 KOG0252 Inorganic phosphate tr 98.1 2.1E-06 4.5E-11 75.8 3.0 132 3-135 360-501 (538)
260 KOG2325 Predicted transporter/ 98.0 8E-05 1.7E-09 67.7 11.6 135 243-383 75-226 (488)
261 PF05631 DUF791: Protein of un 98.0 0.00029 6.2E-09 61.1 14.3 143 233-381 62-211 (354)
262 TIGR00939 2a57 Equilibrative N 98.0 0.0004 8.7E-09 63.6 16.2 55 296-351 371-425 (437)
263 PF03209 PUCC: PUCC protein; 97.9 0.00024 5.2E-09 62.7 12.3 111 246-362 22-153 (403)
264 KOG2816 Predicted transporter 97.8 0.00052 1.1E-08 63.1 13.7 120 249-378 72-191 (463)
265 TIGR00926 2A1704 Peptide:H+ sy 97.8 0.00047 1E-08 66.4 13.3 158 220-383 3-179 (654)
266 PF07672 MFS_Mycoplasma: Mycop 97.7 0.00087 1.9E-08 55.3 12.0 55 76-130 2-61 (267)
267 KOG3880 Predicted small molecu 97.6 0.00086 1.9E-08 56.4 10.1 120 9-133 80-201 (409)
268 PF03092 BT1: BT1 family; Int 97.3 0.0031 6.6E-08 58.2 11.7 150 228-380 13-169 (433)
269 PF12832 MFS_1_like: MFS_1 lik 97.3 0.0023 4.9E-08 42.6 7.9 58 211-269 7-65 (77)
270 PF05978 UNC-93: Ion channel r 97.3 0.015 3.1E-07 44.8 13.2 102 246-354 44-145 (156)
271 PF01770 Folate_carrier: Reduc 97.3 0.012 2.7E-07 52.7 14.1 128 225-359 24-154 (412)
272 PF06963 FPN1: Ferroportin1 (F 97.2 0.071 1.5E-06 48.8 18.8 172 206-379 4-193 (432)
273 KOG2563 Permease of the major 97.2 0.0046 9.9E-08 55.3 10.7 121 230-358 70-200 (480)
274 PF03137 OATP: Organic Anion T 97.1 6.2E-05 1.3E-09 70.8 -1.6 133 220-358 18-201 (539)
275 KOG0637 Sucrose transporter an 97.1 0.0079 1.7E-07 53.9 10.9 149 206-355 34-200 (498)
276 TIGR00769 AAA ADP/ATP carrier 96.7 0.11 2.4E-06 48.1 16.0 56 302-358 133-189 (472)
277 PF01733 Nucleoside_tran: Nucl 96.5 0.00063 1.4E-08 59.6 -0.4 55 296-351 247-301 (309)
278 COG0477 ProP Permeases of the 96.5 0.063 1.4E-06 46.8 12.4 133 223-360 21-158 (338)
279 KOG1479 Nucleoside transporter 96.4 0.14 3.1E-06 45.8 13.9 61 295-357 341-401 (406)
280 KOG2601 Iron transporter [Inor 96.3 0.018 3.9E-07 50.2 7.4 118 5-122 77-217 (503)
281 KOG3626 Organic anion transpor 96.1 0.035 7.5E-07 53.5 9.1 124 229-358 121-297 (735)
282 PF06779 DUF1228: Protein of u 96.1 0.061 1.3E-06 36.2 7.7 78 217-300 5-83 (85)
283 PRK03612 spermidine synthase; 95.8 0.62 1.4E-05 44.2 16.0 59 304-364 117-176 (521)
284 KOG3098 Uncharacterized conser 95.8 0.087 1.9E-06 48.3 9.9 99 3-102 291-410 (461)
285 KOG1479 Nucleoside transporter 95.7 0.48 1E-05 42.5 13.8 116 216-333 30-152 (406)
286 PF03219 TLC: TLC ATP/ADP tran 95.5 0.8 1.7E-05 42.9 15.0 57 302-359 148-205 (491)
287 PRK03612 spermidine synthase; 95.3 0.13 2.8E-06 48.6 9.7 77 48-125 114-191 (521)
288 PF06779 DUF1228: Protein of u 95.2 0.02 4.4E-07 38.5 2.9 47 2-48 38-84 (85)
289 PF02487 CLN3: CLN3 protein; 95.1 0.093 2E-06 47.2 7.6 68 38-105 329-396 (402)
290 PF00854 PTR2: POT family; In 94.7 0.11 2.4E-06 47.0 7.3 86 298-385 34-122 (372)
291 PF12832 MFS_1_like: MFS_1 lik 94.1 0.057 1.2E-06 35.9 2.8 28 4-31 48-75 (77)
292 KOG3097 Predicted membrane pro 91.6 8.8 0.00019 33.6 14.4 70 4-74 71-140 (390)
293 PF13000 Acatn: Acetyl-coenzym 91.3 1.2 2.5E-05 41.2 8.0 39 318-357 139-177 (544)
294 KOG3574 Acetyl-CoA transporter 91.3 2.6 5.7E-05 37.6 9.8 139 204-351 31-186 (510)
295 KOG1237 H+/oligopeptide sympor 90.0 7.3 0.00016 37.5 12.5 166 214-385 47-244 (571)
296 TIGR00939 2a57 Equilibrative N 89.2 10 0.00022 35.3 12.5 33 297-330 106-138 (437)
297 PF06912 DUF1275: Protein of u 85.1 11 0.00023 30.9 9.4 43 71-113 153-195 (209)
298 COG5336 Uncharacterized protei 83.5 4.5 9.8E-05 28.3 5.2 35 329-364 38-72 (116)
299 KOG3880 Predicted small molecu 83.4 3.6 7.8E-05 35.5 5.8 75 29-103 327-401 (409)
300 PF03547 Mem_trans: Membrane t 81.5 11 0.00023 34.4 8.9 19 250-268 6-24 (385)
301 PF02990 EMP70: Endomembrane p 80.0 34 0.00074 32.7 11.8 24 246-269 304-327 (521)
302 KOG4332 Predicted sugar transp 79.2 1.6 3.4E-05 36.8 2.3 70 251-326 84-154 (454)
303 PF07857 DUF1632: CEO family ( 78.0 40 0.00088 28.5 10.2 22 214-235 188-209 (254)
304 COG5336 Uncharacterized protei 72.9 4.1 8.9E-05 28.5 2.6 18 9-26 60-78 (116)
305 KOG2881 Predicted membrane pro 72.8 57 0.0012 27.5 10.6 20 250-269 251-270 (294)
306 COG3202 ATP/ADP translocase [E 67.3 1.1E+02 0.0024 28.8 22.7 80 303-383 290-370 (509)
307 PF06679 DUF1180: Protein of u 65.5 14 0.0003 28.7 4.4 9 366-374 96-104 (163)
308 PF00909 Ammonium_transp: Ammo 65.4 1.1E+02 0.0025 28.1 12.5 33 77-109 108-140 (399)
309 PF11947 DUF3464: Protein of u 57.6 37 0.0008 26.0 5.4 79 13-95 56-145 (153)
310 PF12805 FUSC-like: FUSC-like 55.3 87 0.0019 27.2 8.2 95 25-133 3-98 (284)
311 PRK13629 threonine/serine tran 55.3 1.8E+02 0.0039 27.1 17.2 43 73-120 17-59 (443)
312 PF07857 DUF1632: CEO family ( 52.5 20 0.00043 30.3 3.7 8 353-360 94-101 (254)
313 COG2962 RarD Predicted permeas 51.4 1.6E+02 0.0035 25.4 10.1 67 196-269 61-127 (293)
314 PRK10263 DNA translocase FtsK; 49.4 2.1E+02 0.0046 30.8 10.7 22 247-268 60-81 (1355)
315 PF01733 Nucleoside_tran: Nucl 49.3 5.3 0.00012 35.1 -0.1 61 42-102 246-306 (309)
316 PF05255 UPF0220: Uncharacteri 47.9 1.3E+02 0.0029 23.5 9.1 58 71-128 13-76 (166)
317 KOG2601 Iron transporter [Inor 47.8 2.2E+02 0.0048 26.0 12.6 61 210-270 33-94 (503)
318 PF11947 DUF3464: Protein of u 47.3 57 0.0012 25.0 5.0 32 313-344 110-141 (153)
319 PF07672 MFS_Mycoplasma: Mycop 47.0 87 0.0019 26.7 6.5 89 3-94 153-253 (267)
320 KOG3810 Micronutrient transpor 46.5 19 0.00041 32.0 2.7 86 4-89 284-371 (433)
321 PF10183 ESSS: ESSS subunit of 43.2 33 0.00072 24.4 3.1 31 104-134 54-84 (105)
322 TIGR01667 YCCS_YHJK integral m 42.0 1.7E+02 0.0036 29.4 8.7 51 10-60 42-97 (701)
323 PRK10720 uracil transporter; P 41.8 3E+02 0.0064 25.7 9.9 28 110-137 384-411 (428)
324 PF07760 DUF1616: Protein of u 41.7 2.4E+02 0.0051 24.6 9.2 56 47-103 22-77 (287)
325 TIGR01666 YCCS hypothetical me 41.6 1.4E+02 0.003 30.0 8.0 52 9-60 41-97 (704)
326 PF11151 DUF2929: Protein of u 40.2 90 0.0019 19.3 5.3 42 88-129 10-51 (57)
327 TIGR00836 amt ammonium transpo 39.7 3.1E+02 0.0067 25.3 9.8 18 94-111 105-122 (403)
328 PF03606 DcuC: C4-dicarboxylat 39.4 3.4E+02 0.0073 25.7 12.7 9 261-269 106-114 (465)
329 TIGR03644 marine_trans_1 proba 38.9 3.2E+02 0.0069 25.3 12.4 18 94-111 112-129 (404)
330 KOG1277 Endosomal membrane pro 37.7 1.3E+02 0.0029 27.8 6.5 34 254-288 342-375 (593)
331 PF02694 UPF0060: Uncharacteri 35.1 47 0.001 23.5 2.7 38 4-41 67-104 (107)
332 KOG4112 Signal peptidase subun 35.0 92 0.002 21.4 3.9 16 346-362 35-50 (101)
333 PF15048 OSTbeta: Organic solu 34.5 76 0.0017 23.2 3.7 19 364-382 35-53 (125)
334 PF02632 BioY: BioY family; I 33.7 76 0.0017 24.3 4.0 21 2-22 64-84 (148)
335 COG4769 Predicted membrane pro 33.1 31 0.00067 26.6 1.7 47 6-58 88-134 (181)
336 PRK02237 hypothetical protein; 32.4 64 0.0014 23.0 3.0 38 4-41 69-106 (109)
337 PF11299 DUF3100: Protein of u 32.2 40 0.00087 27.8 2.3 54 48-102 175-228 (241)
338 COG1268 BioY Uncharacterized c 32.1 84 0.0018 25.1 4.0 19 2-20 93-111 (184)
339 PF10785 NADH-u_ox-rdase: NADH 31.2 88 0.0019 21.3 3.5 42 3-44 30-78 (86)
340 TIGR02230 ATPase_gene1 F0F1-AT 28.4 2.2E+02 0.0047 20.1 6.4 36 84-119 47-86 (100)
341 PRK11588 hypothetical protein; 27.3 5.6E+02 0.012 24.5 11.5 142 260-418 137-281 (506)
342 PF05297 Herpes_LMP1: Herpesvi 27.2 21 0.00045 30.2 0.0 19 113-131 24-42 (381)
343 PF04226 Transgly_assoc: Trans 26.7 1.4E+02 0.0031 17.5 4.5 36 92-127 7-42 (48)
344 KOG3097 Predicted membrane pro 26.5 4.8E+02 0.01 23.5 8.6 109 204-324 29-137 (390)
345 PF11833 DUF3353: Protein of u 26.3 3.3E+02 0.0072 22.1 6.6 31 75-105 136-166 (194)
346 PF03547 Mem_trans: Membrane t 26.1 5E+02 0.011 23.6 20.1 21 194-214 235-255 (385)
347 PF12273 RCR: Chitin synthesis 26.0 38 0.00081 25.2 1.2 20 110-129 1-20 (130)
348 KOG4830 Predicted sugar transp 25.7 12 0.00026 31.6 -1.6 43 197-239 194-236 (412)
349 PF11298 DUF3099: Protein of u 25.5 1.4E+02 0.0031 19.6 3.5 32 13-44 9-40 (73)
350 PF06645 SPC12: Microsomal sig 24.6 2.2E+02 0.0047 18.9 6.2 51 81-137 9-59 (76)
351 PLN02332 membrane bound O-acyl 23.8 6.3E+02 0.014 23.9 10.8 31 19-49 339-369 (465)
352 PF13268 DUF4059: Protein of u 23.4 1.1E+02 0.0023 19.9 2.6 24 372-395 17-40 (72)
353 PF03741 TerC: Integral membra 22.4 4.1E+02 0.0089 21.3 14.7 57 61-119 13-69 (183)
354 PF13386 DsbD_2: Cytochrome C 21.9 4.3E+02 0.0093 21.3 15.5 29 241-269 152-180 (199)
355 PF11511 RhodobacterPufX: Intr 21.9 2.3E+02 0.005 18.2 4.9 30 108-137 29-58 (67)
356 TIGR00836 amt ammonium transpo 21.4 2.6E+02 0.0056 25.8 5.8 51 50-100 281-331 (403)
357 PF13940 Ldr_toxin: Toxin Ldr, 21.3 1.3E+02 0.0028 16.1 2.2 20 246-265 15-34 (35)
358 PRK14229 camphor resistance pr 21.1 3.2E+02 0.007 19.6 5.3 46 29-74 34-79 (108)
359 PF04341 DUF485: Protein of un 20.9 2.9E+02 0.0063 19.0 6.4 34 203-236 15-48 (91)
360 TIGR01666 YCCS hypothetical me 20.9 8.8E+02 0.019 24.6 11.2 52 260-311 44-95 (704)
361 PTZ00370 STEVOR; Provisional 20.7 4.6E+02 0.01 22.7 6.5 23 353-375 246-268 (296)
362 COG1288 Predicted membrane pro 20.4 2.5E+02 0.0055 26.0 5.3 21 110-130 13-33 (481)
363 TIGR03644 marine_trans_1 proba 20.2 4E+02 0.0088 24.6 6.7 48 52-100 297-344 (404)
364 PF14851 FAM176: FAM176 family 20.1 2.9E+02 0.0062 21.4 4.8 7 354-360 12-18 (153)
No 1
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.2e-37 Score=264.97 Aligned_cols=352 Identities=16% Similarity=0.164 Sum_probs=276.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+.|.++..+.|.++||.+.|+.+..++++.++.+++++++++.+.+.++.+++|..+|.-+|.+...+..|++++|||+.
T Consensus 75 i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~ 154 (448)
T COG2271 75 ITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTW 154 (448)
T ss_pred HHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCce
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhH--HhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~--~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.++++.+.++|..+.|++. +.+..+.+||..|++.++++++.+++.++..+++|+...-++-++...
T Consensus 155 ~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs~GLP~ie~~~~----------- 223 (448)
T COG2271 155 WSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQSEGLPPIEEYRG----------- 223 (448)
T ss_pred EEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccccCCCCHHHhhc-----------
Confidence 9999999999999999999 888888899999999999999999999888877655433322221110
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+..+...++++++.... ...-.+.+++||.+|.+.++..+.+..-+++..|.|.|+.+..+++.
T Consensus 224 -------d~~e~~~~~~~~~~ls~---------~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~ 287 (448)
T COG2271 224 -------DPLEIYEEEKENEGLTA---------WQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL 287 (448)
T ss_pred -------CchhhhhhhccCCCccH---------HHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence 00000000000000000 01235678999999999999999999999999999999999999997
Q ss_pred chhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHhccC
Q 014628 240 ADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 240 ~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 316 (421)
..... .++.-.++++|++++|+++||+.+.++. ...+++.+...++.......+ +.+...+++++.|+...+-..
T Consensus 288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPqm 365 (448)
T COG2271 288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQM 365 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHHH
Confidence 66644 3677799999999999999998643221 333344444444444444443 346666777777777777766
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.......|..|++..|++.|+...+.+.+|...+....|++.|.+| |...|++..+..+++.++++
T Consensus 366 LiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~a~l~~lll~ 431 (448)
T COG2271 366 LIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIAALLAILLLL 431 (448)
T ss_pred HHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHHHHHHHHHHH
Confidence 6677788999999999999999877777799999989999999865 77788877776666665544
No 2
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2e-35 Score=255.21 Aligned_cols=323 Identities=19% Similarity=0.217 Sum_probs=259.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++|+...+.||+.||++++..+.++.++++++++++||+.++++|++.|+..|.+++...++..+..|+++|+++
T Consensus 59 l~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~A 138 (394)
T COG2814 59 LGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRA 138 (394)
T ss_pred HHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..++.++|.+++.++.+.+|||+.|++.++++++..+..+..+| +++. +++.+..
T Consensus 139 iaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP--~~~~--~~~~~~~-------------- 200 (394)
T COG2814 139 LALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLP--PSEI--SGSLPGP-------------- 200 (394)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCC--CccC--CCCCCcc--------------
Confidence 999999999999999999999999999999999999999999988888888 1111 1111000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++..+++|+|.++...+..++.....+...+|+..++++..+.+...
T Consensus 201 --------------------------------~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~ 248 (394)
T COG2814 201 --------------------------------LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSA 248 (394)
T ss_pred --------------------------------hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhH
Confidence 122446789999999999999888889999999999999999988765
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH-HHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA-ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .....++++.++|+.++|++.|| +.+ +.+.....+.. ....+....++.+...+...+.++..........
T Consensus 249 vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~-----~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~ 322 (394)
T COG2814 249 VSLVLLAFGIAGFIGNLLGGRLADR-GPR-----RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQ 322 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccc-cch-----hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHH
Confidence 5 44477889999999999999999 555 55554433333 3334444444555555555555555544433344
Q ss_pred hhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
....+ ..|+.++.+.+++...++. |..+|..++|.+.|+.| +....++.+...+++..+.+
T Consensus 323 ~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~ 383 (394)
T COG2814 323 TRLAR-LAPDAADLAGSLNVAAFNL-GIALGAALGGLVLDALG-YAATGWVGAALLLLALLLAL 383 (394)
T ss_pred HHhcc-cCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHH
Confidence 44444 4468899999999888887 99999999999999955 77777777777666665554
No 3
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=276.64 Aligned_cols=334 Identities=11% Similarity=0.044 Sum_probs=222.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHH--------HHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.++++++|+++||+|||+++.+++++++++++++++++|+++ ++++|+++|++.|..++...+++.|++
T Consensus 68 l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~ 147 (490)
T PRK10642 68 LIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYS 147 (490)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhC
Confidence 567899999999999999999999999999999999999999875 889999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
|+++|+++.++...+..+|..+|+.+...+. +.+|||++|++.+++.++ .++.....||++++....++.+
T Consensus 148 p~~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~ 226 (490)
T PRK10642 148 PDRKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLE 226 (490)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhh
Confidence 9999999999999988888888887665443 257999999997765543 3333344566543211000000
Q ss_pred hhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhc-chh-HHHHHHHHHHHHHHHHHH
Q 014628 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ-EKV-YVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~ 223 (421)
.. .. +.. .+++ ..+++++++ ++. ........++....++.+
T Consensus 227 ~~------------~~-----~~~-------~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (490)
T PRK10642 227 QG------------DR-----EGL-------QDGP-------------KVSFKEIATKHWRSLLTCIGLVIATNVTYYML 269 (490)
T ss_pred hh------------cc-----ccc-------cccc-------------cCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHH
Confidence 00 00 000 0000 011222332 122 222222234455677788
Q ss_pred HHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHH-HH--HHHHhhhhhHH
Q 014628 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SC--LTAFCLSSLYG 299 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~ 299 (421)
..|+|.|+++..+.+.... .......++.+++.++.|+++||+||| +.+........+ .. +.....++...
T Consensus 270 ~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (490)
T PRK10642 270 LTYMPSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGL 344 (490)
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 8899999988777765433 333555677888899999999999998 555444332221 11 11112223333
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
..+..++.+++.+...+....+..+.+|++.|+++.|+.+..... ++.++|.+.+++.+..+++...+.+.....+++.
T Consensus 345 ~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~ 423 (490)
T PRK10642 345 IFAGLLMLAVILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGL 423 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHH
Confidence 334444445555555555667778889999999999986555555 4567899999998866554444444443333333
No 4
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=4.2e-35 Score=269.40 Aligned_cols=351 Identities=14% Similarity=0.146 Sum_probs=240.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|++.|...+...+++.|++|+++|+++
T Consensus 69 ~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~ 148 (434)
T PRK11663 69 ITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGW 148 (434)
T ss_pred HHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++++.+.++|..+++.+++.+.+.+|||+.|++.+++.++..+...+..||++++...++..++..
T Consensus 149 ~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~------------- 215 (434)
T PRK11663 149 WAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQAMGLPSVGEWRH------------- 215 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHhhcCCCCcccccc-------------
Confidence 9999999999999999999999999999999999988776665555555565433211111100000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+ ..+ ... +.++++ .+.++..+ +..++++.++...+..++.......+..|+|.|+.+..+.+...
T Consensus 216 -~-~~~---~~~-~~~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~ 280 (434)
T PRK11663 216 -D-ALE---LAQ-QQEGAG-------LSRKEILT--KYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVT 280 (434)
T ss_pred -c-ccc---cch-hccccC-------CChhhhHH--HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHH
Confidence 0 000 000 000000 00001001 13567888888877777777777788889999998877887654
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++++++.++.|+++||+.+++++................+......+........+..+++..........
T Consensus 281 a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 360 (434)
T PRK11663 281 ANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPFASYVMQAACFFTIGFFVFGPQMLIGM 360 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 4 444667788999999999999998433211111111111111111111111222222222222222222111122344
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
...+..|++.|++++|+.+...+. |.+++|.+.|++.|..| +...+...+++.+++.+..
T Consensus 361 ~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f~~~~~~~~~~~~~~ 420 (434)
T PRK11663 361 AAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLEIWH-WTGFFVVISIAAGISALLL 420 (434)
T ss_pred HHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHHhcc-cHHHHHHHHHHHHHHHHHH
Confidence 567778889999999999877666 99999999999999877 7788877777665555433
No 5
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1e-34 Score=263.89 Aligned_cols=321 Identities=16% Similarity=0.094 Sum_probs=240.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++..++++++++++|++.++++|+++|++.+...+...+++.|++|+++|+++
T Consensus 55 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 134 (390)
T PRK03545 55 WVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKAQA 134 (390)
T ss_pred HHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhhhH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
++++..+.++|..++|++++.+.++.|||+.|++.++++++..+..+...|+.++ +++..
T Consensus 135 ~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~------~~~~~-------------- 194 (390)
T PRK03545 135 LSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS------EHSGS-------------- 194 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC------CCcch--------------
Confidence 9999999999999999999999999999999999998877766665555454211 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++.++.+++|.++......++.....+....+.|.++++..+.+...
T Consensus 195 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~ 242 (390)
T PRK03545 195 --------------------------------LKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENF 242 (390)
T ss_pred --------------------------------HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccH
Confidence 012445677888776655555555555556677888888877777554
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++++++.++.+++.||+++| ....................++.+...+...+.+++.....+....
T Consensus 243 ~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~ 317 (390)
T PRK03545 243 ATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQV 317 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHHH
Confidence 4 344566778899999999999999876 4443333333333333333444555555555566655444444556
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+.+.. ++.+++++|+.+...+. |..+||.+.|++.|..| ++..+...+.+.+++.+..
T Consensus 318 ~~~~~~-~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~~~~~~~ 376 (390)
T PRK03545 318 KVLKLA-PDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALALAALVWS 376 (390)
T ss_pred HHHHhC-CCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHH
Confidence 666665 46889999999666665 88899999999999876 6677776666655555443
No 6
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=4.3e-35 Score=261.43 Aligned_cols=325 Identities=12% Similarity=0.019 Sum_probs=230.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+......+.+....++|++.++++|+++|++.+. .+.....++|++|+++|+++
T Consensus 37 ~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a 115 (368)
T TIGR00903 37 AAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLV 115 (368)
T ss_pred HHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHH
Confidence 57889999999999999999987666555545443333347999999999999999986 55666677999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|.++++++++.+.+++|||+.|++.++++++..++.++..||++++.+ ++.+ .
T Consensus 116 ~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~~~--~~~~-~-------------- 178 (368)
T TIGR00903 116 ISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQAA--EGFG-F-------------- 178 (368)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC--CCcc-h--------------
Confidence 9999999999999999999999999999999999999888887777777787543210 0000 0
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+ +..+++++++++|.+|...+..++....++++.+|+|.|+++ .+.+...
T Consensus 179 ----------~-------------------~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~~ 228 (368)
T TIGR00903 179 ----------K-------------------DAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDIA 228 (368)
T ss_pred ----------H-------------------HHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChHH
Confidence 0 001235678899999999999999999999999999999976 4465433
Q ss_pred hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhh
Q 014628 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 321 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (421)
.....+..+ .+.+..++++||..|+..+. ...........+.+.......+....+...++.+++.....+..+.+
T Consensus 229 ~~~~~l~~~---~g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (368)
T TIGR00903 229 GDAVALAIL---AGLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYAIIMDW 304 (368)
T ss_pred HHHHHHHHH---HHHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHHHHHHH
Confidence 233333344 34444688999987653221 22222222223333222223333333444455555555666667788
Q ss_pred hhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 322 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+|.+|++.|+++.|+.+...+. +++.+|.+.+.+.. + ....|.+.+...+++.+..
T Consensus 305 ~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i~~~~~ 361 (368)
T TIGR00903 305 IGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYFTFLAILITIAFAIA 361 (368)
T ss_pred HHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999877777 77788888887774 3 4456666665555554443
No 7
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.4e-35 Score=267.78 Aligned_cols=348 Identities=16% Similarity=0.192 Sum_probs=237.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||+++..++++++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 54 ~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~ 133 (412)
T TIGR02332 54 AAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARA 133 (412)
T ss_pred HHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHH
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhh------cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGS------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+++++.+.++|.++++.+++++.+ ..|||+.|++.++++++..++.+++.||++++.+-..+.+.. ...+.
T Consensus 134 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~---~~~~~ 210 (412)
T TIGR02332 134 NALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKK---ALKEM 210 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHH---HHHHH
Confidence 999999999999999999998764 469999999999888877777777777755321100000000 00000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh-
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI- 234 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 234 (421)
.+....+ .++ .++ .. .+.. ......++.++ +|.++...+..++....++.+.+|+|.++++.
T Consensus 211 ~~~~~~~--~~~-~~~---~~-~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~ 273 (412)
T TIGR02332 211 IDNDQLT--LEQ-PEG---AF-AHAA---------MPQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFN 273 (412)
T ss_pred HHhcccc--ccc-ccc---cc-cccc---------ccHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0000000 000 000 00 0000 00011233443 47777777777777888888999999999874
Q ss_pred hCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHh
Q 014628 235 YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
.+.+.... .+.....++.+++.++.|+++||+++|+ ...............+....++........++..++...
T Consensus 274 ~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 349 (412)
T TIGR02332 274 QGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFS 349 (412)
T ss_pred CCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhh
Confidence 34443333 4457778889999999999999998762 222222222222222222222222222222222222222
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
..+.......+..|+++|+++.|+.+...+. |++++|.+.|.+.|..|+|...+.+++++
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~~ 409 (412)
T TIGR02332 350 AMAIFWTTPDQSISLQARAIAIAVINATGNI-GSALSPFLIGILKDATGSFNSGLWFVAAL 409 (412)
T ss_pred hhhHHHhhcccccchHHHHHHHHHHHHhhhh-hhhhhhhhcccccccCCCCchhHHHHHHH
Confidence 2222233345567889999999999877776 99999999999999988888877766554
No 8
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=7.2e-35 Score=276.31 Aligned_cols=371 Identities=15% Similarity=0.135 Sum_probs=254.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|++++++++|+++||+|||++++++++++++++++++++++++.++++|++.|++.++..+...+++.|++|+++|++.
T Consensus 213 lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~Rg~~ 292 (742)
T TIGR01299 213 LGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEKRGEH 292 (742)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
Confidence 67889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhc-------------chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhh
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSH-------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 148 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~-------------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (421)
++++..+..+|.++++.++..+... .+||+.+++.+++.++.. +..+++||++++...+.+.+ .
T Consensus 293 ~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~l-l~~~~lPESPrwL~~~gr~~--e 369 (742)
T TIGR01299 293 LSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFAI-GALTFMPESPRFFLENGKHD--E 369 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHHH-HHHHHcCCCHHHHHHCCCHH--H
Confidence 9999999999999999888766543 369999998887765544 44556699988743222211 1
Q ss_pred hhhcccccccccCCcc--cccc-----cchhhhhh-----hccccc-----hhhhhhhhhhhhhhhHHhhcchh---HHH
Q 014628 149 VASVSEGSEASNLNDH--VSED-----ISDQASER-----SIKSIG-----ESRFLNQLSQFSQDTKVLLQEKV---YVV 208 (421)
Q Consensus 149 ~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~-----~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~---~~~ 208 (421)
......++...+.... ..+. .+.....+ ...... ..+........+.+++.+++.+. .+.
T Consensus 370 A~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lf~~~~~~~tl~ 449 (742)
T TIGR01299 370 AWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALSEGGGIWGNFLRCFNPEVREITIK 449 (742)
T ss_pred HHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhhhhhhHHHHHHHHcCccHHHHHHH
Confidence 1111111211111000 0000 00000000 000000 00001111223334555655443 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHh----h-------------------------------------CC-----c----
Q 014628 209 NVLGYIAYNFVIGAYSYWGPKAGYNI----Y-------------------------------------HM-----S---- 238 (421)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------------------------~~-----~---- 238 (421)
+.+.+++..+.++++..|+|.++.+. + +. .
T Consensus 450 l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 529 (742)
T TIGR01299 450 LMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIHRGGEYDNDKFIGLKFKSVSFEDS 529 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhccccccccchhhcccccccccccc
Confidence 55567778888999999999875441 0 00 0
Q ss_pred ------------------------------------------------------------c-----chhHHHhhhhHHHH
Q 014628 239 ------------------------------------------------------------N-----ADMMFGGVTIVCGI 253 (421)
Q Consensus 239 ------------------------------------------------------------~-----~~~~~~~~~~~~~~ 253 (421)
. .......+..++.+
T Consensus 530 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~l~~l~~i 609 (742)
T TIGR01299 530 LFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPIDFDGDDEGAYMIYFVNFLGTLAVL 609 (742)
T ss_pred cccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCccCCccchhHHHHHHHHHHHHHHHH
Confidence 0 00112345567889
Q ss_pred HHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhH
Q 014628 254 VGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 333 (421)
Q Consensus 254 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (421)
++.+++++++||+||| +++..+.++.++.+++.....+....+++.++.+++.+..++....++.|.+|++.|++
T Consensus 610 ~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgt 684 (742)
T TIGR01299 610 PGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRAT 684 (742)
T ss_pred HHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHH
Confidence 9999999999999998 77777777777666665555555555555566677777777888899999999999999
Q ss_pred HHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 334 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 334 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++|+.+...+. |.+++|.+.+.+.+.. ...++++++++.++++++.+
T Consensus 685 a~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 685 AFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence 99999766666 9999999999887742 34566666655555444433
No 9
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=1.5e-34 Score=265.82 Aligned_cols=324 Identities=15% Similarity=0.100 Sum_probs=218.9
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHH--------HHHHHHHHhhhhhhhhccchhhhhhccCC
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
+..++++++|+++||+|||+++..++++++++++++++++++. .++++|+++|++.|..++...++++|++|
T Consensus 75 ~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p 154 (432)
T PRK10406 75 MRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAV 154 (432)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCC
Confidence 4458999999999999999999999999999999999998874 58899999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccch
Q 014628 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKA 146 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 146 (421)
+++|+++.++.+.+...|..+++.+...+. +.+|||++|++.++++++... .....||+++. ++ +
T Consensus 155 ~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~-~- 227 (432)
T PRK10406 155 EGRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----ET-R- 227 (432)
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----HH-h-
Confidence 999999999999999889888887765543 257999999998776654322 22222332110 00 0
Q ss_pred hhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHH-HHHHHHHHHH
Q 014628 147 QVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSY 225 (421)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 225 (421)
. .++ ..++++++++++.+...+...+ ....++.+..
T Consensus 228 ~-----------------------------~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (432)
T PRK10406 228 A-----------------------------LKE--------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTT 264 (432)
T ss_pred h-----------------------------hcc--------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 000 0124456677777765555444 3566778889
Q ss_pred HhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH-HH--Hh-hhhhHHH
Q 014628 226 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA--FC-LSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~-~~~~~~~ 300 (421)
|+|.|+++..+.+..+. ....+..+...++.++.|+++||++|| +.+.....+...... .. .. .++....
T Consensus 265 ~lp~~l~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (432)
T PRK10406 265 YMQKYLVNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAA 339 (432)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 99999988777775444 334555666678888889999999988 444433332222211 11 11 1122222
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
+....+..++.+...+....+..|.+|++.|+++.|+.+...+.+.+...|.+.+.+ +..|.+...+++.+...+++.+
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~ 418 (432)
T PRK10406 340 FGLVMCALLIVSFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFL 418 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHH
Confidence 222222223333333445677889999999999999997766654344477777744 5556565555555544444444
Q ss_pred HH
Q 014628 381 IW 382 (421)
Q Consensus 381 ~~ 382 (421)
..
T Consensus 419 ~~ 420 (432)
T PRK10406 419 VS 420 (432)
T ss_pred HH
Confidence 33
No 10
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=3.8e-35 Score=272.27 Aligned_cols=348 Identities=16% Similarity=0.115 Sum_probs=242.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh-----hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++++++++.|+++||+|||+++..++++++++.+..++ +++++.+++.|+++|++.+...|...++++||+|++
T Consensus 75 ~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 154 (467)
T PRK09556 75 ITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPRR 154 (467)
T ss_pred HHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCcc
Confidence 567899999999999999999999988888877766654 689999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhcc---hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
+|+++++++..+.++|.++++.+..++.+.. +||..|.+.++++++.+++.+++.++.+++.+..++ ++.
T Consensus 155 ~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~~~~~~~~p~~~~~~~~------~~~- 227 (467)
T PRK09556 155 KRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIGLRYGSDSPEELGWGKA------EEI- 227 (467)
T ss_pred ceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHHHHhCCCChhhcCCCCh------hhc-
Confidence 9999999999999999999999987776543 699999998888887777766665543322110000 000
Q ss_pred cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhh-hHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
.++ ...++....+.++ . . ..+. .+..+++|.+|...+..++......+..+|+|.|++
T Consensus 228 --~~~---------~~~~~~~~~~~~~---~----~---~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~yl~ 286 (467)
T PRK09556 228 --FGE---------PISEEDKETESTD---M----T---KWQIFVEYVLKNPVIWLLCFANIFLYIVRIGIDNWSPVYAF 286 (467)
T ss_pred --ccC---------ccchhhhcccccc---C----c---HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 0000000000000 0 0 0011 223678999999888888888888888999999999
Q ss_pred HhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHH
Q 014628 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS--CLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
+.++.+..+. .......++.+++.++.|+++||+++| +............ .+.....++.+...+..++.++
T Consensus 287 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 361 (467)
T PRK09556 287 QELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGR-----RALVACIALALIIFTLGVYQHATSEYMYLASLFALGF 361 (467)
T ss_pred HccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----chHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 9888886554 444667788999999999999999987 3332222221111 1112222233333333444443
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh------------ccccchhhhHHHHHHHHH
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~ 377 (421)
+.............|.+|++.++++.|+.+...+..|..++|.+.|++.| ..+ |...|.+..++.++
T Consensus 362 ~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~-~~~~f~~~~~~~~~ 440 (467)
T PRK09556 362 LVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTG-WAGTFAALDIAAIG 440 (467)
T ss_pred HHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccC-hHHHHHHHHHHHHH
Confidence 33222222335666889999999999999877776577889999999999 334 88888777666666
Q ss_pred HHHHHH
Q 014628 378 AAGIWF 383 (421)
Q Consensus 378 ~~~~~~ 383 (421)
+.+..+
T Consensus 441 ~~~~~~ 446 (467)
T PRK09556 441 CICLMA 446 (467)
T ss_pred HHHHHH
Confidence 655544
No 11
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-36 Score=258.80 Aligned_cols=326 Identities=37% Similarity=0.592 Sum_probs=249.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+.+.+++|+.|+++|||+||+++.+|..+|.++.+.+++++.||++.++|.+.|+|++.+.|.++++++|.+|.++|+++
T Consensus 79 v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~ 158 (493)
T KOG1330|consen 79 VVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRV 158 (493)
T ss_pred HHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcch-hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++++.+..+|..+|.+.+..+.++.+ |||.|+..++++++.+++.+++.+|..+.. .++.+....
T Consensus 159 ~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga--~~~~~~~~~----------- 225 (493)
T KOG1330|consen 159 LGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPERGA--RDEVDGENK----------- 225 (493)
T ss_pred HHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCccccc--ccccccCCc-----------
Confidence 999999999999999999999988766 999999999999999999999887644321 111100000
Q ss_pred CCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh---CC
Q 014628 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY---HM 237 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 237 (421)
.. ....+.+++.+.+.+++.+....+......+....+..|.|.+....+ +.
T Consensus 226 --------------~~-----------~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~ 280 (493)
T KOG1330|consen 226 --------------MV-----------KPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGF 280 (493)
T ss_pred --------------CC-----------CCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCC
Confidence 00 111233566777788888888888888888888888888888665433 22
Q ss_pred c-cchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHH-----HHHHHHHHHHHHHH-HHh--hhhhHHHHHHHHHHH
Q 014628 238 S-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL-----LSAATFLGAISCLT-AFC--LSSLYGFLALFTVGE 308 (421)
Q Consensus 238 ~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~ 308 (421)
+ .....+..+...++.+|.+.+|.++||+.++.++..+. .........+.++. ... ..+.+..++++++.-
T Consensus 281 ~~~~~~ifg~vt~~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~ 360 (493)
T KOG1330|consen 281 DHNATLIFGGVTCAGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGE 360 (493)
T ss_pred ccccchhhhhHHHhhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 3 24456678888999999999999999976643331111 11111111111111 111 123334444444444
Q ss_pred HHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccch
Q 014628 309 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 365 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 365 (421)
......+.+...+..+.+|++.|.++.++...+...+|...+|.+.|.+.|+.-++.
T Consensus 361 ~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 361 TISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 555566777788899999999999999999999999999999999999999876565
No 12
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=5.6e-34 Score=261.89 Aligned_cols=333 Identities=12% Similarity=0.074 Sum_probs=227.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHH--------HHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++..+++++.|+++||+|||+++..++++++++++++++++++. .++++|+++|++.|..++....++.|++
T Consensus 75 ~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~ 154 (438)
T PRK09952 75 LFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESA 154 (438)
T ss_pred HHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhC
Confidence 34568889999999999999999999999999999999999987 4888999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
|+|+|++..+..+.+..+|.++++.+...+. +.+|||++|++.+++.++. +......||++++.+.+++.+
T Consensus 155 p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~~-~~l~~~~~es~~~~~~~~~~~ 233 (438)
T PRK09952 155 PKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVLVLIA-LWVRNGMEESAEFEQQQHEQA 233 (438)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHHHHHH-HHHHHhCCCChhHHHHHhhcc
Confidence 9999999999999999999999887776654 2579999999887764332 222222244321100000000
Q ss_pred hhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHH-HHHHHHHHHHHHH
Q 014628 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYS 224 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 224 (421)
+.+++ ....+.++++|+.+.... ..++.....+...
T Consensus 234 ------------------------------~~~~~-------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (438)
T PRK09952 234 ------------------------------AAKKR-------------IPVIEALLRHPGAFLKIIALRLCELLTMYIVT 270 (438)
T ss_pred ------------------------------ccccc-------------CCHHHHHHHchHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 001122345555554443 3444556677778
Q ss_pred HHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh---h-hhhHH
Q 014628 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---L-SSLYG 299 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~ 299 (421)
.|.|.|.++..+.+.... ....+..+..+++.++.|+++||++|| +.+....++..+....... . ++.+.
T Consensus 271 ~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (438)
T PRK09952 271 AFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVYITGALIGTLSAFPFFMALEAQSIFWI 345 (438)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHcCChHHH
Confidence 899999988777775432 223445566778888999999999998 5554444333332221111 1 12233
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc-ccchhhhHHHHHHHHHH
Q 014628 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLA 378 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~ 378 (421)
.....++.+++.+...+..+.+..|.+|++.|+++.++.+...+.+++.++|.+.+++.|.. ++|...+.+...+.+++
T Consensus 346 ~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~ 425 (438)
T PRK09952 346 VFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLIS 425 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH
Confidence 33334444556566666778888999999999999999766656558888999999998865 34666666666555555
Q ss_pred HHHHH
Q 014628 379 AGIWF 383 (421)
Q Consensus 379 ~~~~~ 383 (421)
.+..+
T Consensus 426 ~v~~~ 430 (438)
T PRK09952 426 AMTAL 430 (438)
T ss_pred HHHHH
Confidence 44443
No 13
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=8.1e-34 Score=259.56 Aligned_cols=352 Identities=17% Similarity=0.190 Sum_probs=251.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++..++.++++++++++.+++.|++.|++.+...+....++.|++|+++|+++
T Consensus 40 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 119 (399)
T TIGR00893 40 WGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERATA 119 (399)
T ss_pred HHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+...++|.++++.+++.+.+..+||+.|++.+++.++..+..++..||.+++.+.. ++..... ..+. .
T Consensus 120 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~---~~~~-~- 191 (399)
T TIGR00893 120 VSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAKWL---TEEEKYI---VVGG-L- 191 (399)
T ss_pred HHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccccC---CHHHHhh---cchh-h-
Confidence 999999999999999999999999999999999999888777776666666543221100 0000000 0000 0
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.+ +. +.+ +++ +......++.+++|.++...+..++.......+..+.|.|+++..+.++..
T Consensus 192 ----~~---~~-~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (399)
T TIGR00893 192 ----LA---EQ-QGK-GPS----------TPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE 252 (399)
T ss_pred ----cc---cc-ccc-ccc----------CCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence 00 00 000 000 001123556778898988888888888888889999999999888877544
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh---hhhhHHHHHHHHHHHHHHHhccCc
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
. .......++.+++.++.+++.||+++|+..................+.... .++.+.......+..++. ...+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 331 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGL-GAGAI 331 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhch-hhhhH
Confidence 4 444666788899999999999999988421100101111111111111111 123333333333333333 35677
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
...+..+..|+++|+++.|+.+...+. |..++|.+.|.+.|..|++...+.+.+.+.+++.+..
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 395 (399)
T TIGR00893 332 GWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSY 395 (399)
T ss_pred HHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHH
Confidence 888999999999999999999776665 9999999999999987767777777766655554443
No 14
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.4e-33 Score=258.20 Aligned_cols=328 Identities=17% Similarity=0.174 Sum_probs=236.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++..++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 61 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 140 (406)
T PRK11551 61 LGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTA 140 (406)
T ss_pred HHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..++.....||++++.+++++.+..
T Consensus 141 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-------------- 206 (406)
T PRK11551 141 VSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAAGAGKQR-------------- 206 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCChhHHhccCcchhh--------------
Confidence 999999999999999999998888889999999988776666665555556643221100000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+ .. .+......+.+..+...+..++.....+....|.|.++++ .+.++..
T Consensus 207 ------------------~-------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~ 256 (406)
T PRK11551 207 ------------------A-------PV----LRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQ 256 (406)
T ss_pred ------------------h-------hh----HHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhh
Confidence 0 00 0000000011222233333344445566677789999887 4555433
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.|++.||++++ +.+..........++.....++.+...+..++.+++.....+....
T Consensus 257 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 331 (406)
T PRK11551 257 AGLVQIAFNIGGALGSLLIGALMDRLRPR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYA 331 (406)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 3 444666788899999999999999987 5555444444444333333444444445555566666666677788
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
+..+.+|+++|+++.|+.+...+. |..++|.+.|.+.+..+++...+.....+.+.+.
T Consensus 332 ~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK11551 332 LAPLFYPTQVRGTGVGAAVAVGRL-GSMAGPLLAGQLLALGRSTVGVIGASIPVILVAA 389 (406)
T ss_pred HHHHHcchhhhhhhhhHHHHhhhH-HHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHH
Confidence 889999999999999999766665 8899999999999986666555554444433333
No 15
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=9.5e-34 Score=265.20 Aligned_cols=369 Identities=16% Similarity=0.129 Sum_probs=228.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+|++++++++|+++||+|||+++.++.++..+++++++++++ ++.++++|+++|++.|...+....++.|++|+
T Consensus 67 ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~ 146 (502)
T TIGR00887 67 IGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK 146 (502)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh
Confidence 578899999999999999999999999999999999988876 78999999999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhh-----------------------cchhHHHHHHHHHHHHHHHHHHHhccc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKP 132 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----------------------~~~wr~~f~~~~~~~~~~~~~~~~~~p 132 (421)
++|++++++.+....+|..+++.++..+.. .++||++|.+.++++++..+. .++.|
T Consensus 147 ~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lp 225 (502)
T TIGR00887 147 KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIP 225 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCC
Confidence 999999999999999999999988876532 237999998888776654444 45569
Q ss_pred ccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhc----chh---
Q 014628 133 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ----EKV--- 205 (421)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--- 205 (421)
|++++...+++.++.. .+...+.+..+.+++ .++.++.++ +++.. .. +++++++ ++.
T Consensus 226 ESpr~l~~~~~~~~~a-~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~----~~-------~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 226 ETPRYTADVAKDVEQA-ASDMSAVLQVKIEAE-PDEVEKAST---AVEVP----KA-------SWSDFFTHFFKWRHGKH 289 (502)
T ss_pred CCHHHHHHhCcchHHH-HHHHHHHhccccccC-cccccchhc---cccch----hh-------hHHHHHHHHhhhHHHHH
Confidence 9988643222211110 000111111000000 000000000 00000 01 1222222 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-------------hHHHhhhhHHHHHHhhhhhHHHhhhccccch
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISN 272 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 272 (421)
.......++.....+++...|.|.++++. +.+... .....+..++.+++.+++++++||+|||
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~~-G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR--- 365 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSAI-GYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK--- 365 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHHH-cCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch---
Confidence 12222233344455667777888888764 443211 0112333456677888999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHH-HHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhccc
Q 014628 273 AFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELL-VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 348 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ 348 (421)
+.+..+..+..+.+....... +........++..++ .....+..+.+..|.+|++.|+++.|+.+...+. +++
T Consensus 366 --~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~ 442 (502)
T TIGR00887 366 --PIQLMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAI 442 (502)
T ss_pred --hHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHH
Confidence 655554444443332222111 111111222222222 2233445566778999999999999999766666 889
Q ss_pred CcchhHHHhhhccc---------cchhhhHHHHHHHHHHHHHHHHhhhhcc-ccccccc
Q 014628 349 PSSPLVGVLQDHVN---------NWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNED 397 (421)
Q Consensus 349 ~~~~~~g~l~~~~g---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 397 (421)
++|.+.+.+.+..+ ++...+.+++++.+++.+..+ ++|| ++++.||
T Consensus 443 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~---~lpEt~~~~lee 498 (502)
T TIGR00887 443 IGQFGFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTL---LIPETKGKSLEE 498 (502)
T ss_pred HHHHHhhhhhccccccccccccccchHHHHHHHHHHHHHHHHhe---EeccCCCCCHHh
Confidence 99999999988431 123455555555544433322 3454 4444443
No 16
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.2e-33 Score=259.38 Aligned_cols=353 Identities=13% Similarity=0.077 Sum_probs=233.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh----hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
+++++++++.|+++||+|||++++.+.++.+++.+++++++ +++.+++.|++.|++.+...+.....+.|++|+++
T Consensus 74 i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~ 153 (452)
T PRK11273 74 IAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKE 153 (452)
T ss_pred HHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHH
Confidence 56788999999999999999999999999999999888763 78888999999999999888888888999999999
Q ss_pred chhHHHHHHHHHHHHhh-hHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 78 KTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~-~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.||++++...+++++..
T Consensus 154 r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~--------- 224 (452)
T PRK11273 154 RGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDTPQSCGLPPIEEYK--------- 224 (452)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCCHhhcCCCChhhhh---------
Confidence 99999999999999874 45655444444458999999998887777776666666654321111100000
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
++.. ++.++++.++ .+.++. -.+.+++++.+|...+..++.....++...|+|.|+++..+
T Consensus 225 -~~~~---------~~~~~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g 285 (452)
T PRK11273 225 -NDYP---------DDYNEKHEQE-------LTAKQI--FMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKH 285 (452)
T ss_pred -hccc---------cccccccCCC-------ccHHHH--HHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 0000 0000000000 000010 02346788999988888878777778888999999998877
Q ss_pred Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHHh
Q 014628 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 313 (421)
.+.... ....+..++.+++.++.|+++||++++++. ........+.......... ..+.+...+.....+.....
T Consensus 286 ~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 363 (452)
T PRK11273 286 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG 363 (452)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh
Confidence 775444 334556678888999999999999543211 1111111111111111111 12222222223333332222
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHh
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
..........+.+|++.|++++|+.+...+..+...+|.+.|.+.|..| |...|..++.+.+++++....+
T Consensus 364 ~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~~~~~~~~~~~~~~~~ 434 (452)
T PRK11273 364 PVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLIVV 434 (452)
T ss_pred HHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHH
Confidence 2222344567889999999999999766666334557999999999987 7788877777666665555433
No 17
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=8e-34 Score=261.78 Aligned_cols=353 Identities=14% Similarity=0.090 Sum_probs=244.6
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHH-HHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+..++.++.|+++||+|||++++.+.++..++.++++++++++.+++ .|+++|++.+...+....++.++++ ++|+++
T Consensus 66 ~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~r~~a 144 (455)
T TIGR00892 66 VLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFITGLGLAFNFQPSLTMLGKYFY-RRRPLA 144 (455)
T ss_pred HHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHH-hhHHHH
Confidence 45677899999999999999999999999999999999999998875 5799999999777777888899996 679999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+..+|..++|.+++.+.+.+|||+.|++.+++.++..+..++..|+.......+++.+ + ..+....
T Consensus 145 ~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~-----~---~~~~~~~ 216 (455)
T TIGR00892 145 NGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPVGPSQRVSKSKSK-----E---GLPPDGS 216 (455)
T ss_pred HHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCCCccccccccccc-----c---cCCCCCc
Confidence 9999999999999999999999999999999999998877666555554433111000000000 0 0000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.+ +. +. ... .+..++ ..++ +++++|.++......++..........++|.|.++ .+.+...
T Consensus 217 ----~~---~~---~~-~~~-----~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~~~ 277 (455)
T TIGR00892 217 ----TK---KL---SK-KST-----AEKINR-FLDF-SLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDEYE 277 (455)
T ss_pred ----cc---cc---cc-cch-----hhhhhh-hcch-HHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCHHH
Confidence 00 00 00 000 000000 0112 46688888888877777777777778889999876 4666544
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. ...++..++.+++.++.+++.||...+.++ ...+..+.+......++....++.+.+.+..++.+++.+...+....
T Consensus 278 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~ 356 (455)
T TIGR00892 278 AAFLLSIIGFVDIFARPSCGLIAGLKWIRPHV-QYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFE 356 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcccccCHHH-HHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHH
Confidence 4 444667788888899999999974322111 12222222222232333333445555566666677777777777788
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHh
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
.+.+.+|+++++++.|+++...+. |.+++|.+.|.+.|..++|...+...+++.+++.+.....
T Consensus 357 ~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~~~~ 420 (455)
T TIGR00892 357 VLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFLAIG 420 (455)
T ss_pred HHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHHHHH
Confidence 889999999999999999766666 9999999999999988778888888777666655544433
No 18
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=5.8e-33 Score=251.86 Aligned_cols=319 Identities=12% Similarity=-0.034 Sum_probs=232.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.+++.|+++|++.+...+....++.|++| ++|+++
T Consensus 55 ~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~ 133 (393)
T PRK09705 55 VTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLV 133 (393)
T ss_pred HHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhH
Confidence 5678899999999999999999999999999999999999999999999999999999999999999999997 779999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcc-hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
++.+..+...|..+++.+++++.++. +||+.+.+.++..++..+..+...++. +++++..
T Consensus 134 ~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~------------- 194 (393)
T PRK09705 134 MGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSARE------VASSHKT------------- 194 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhcCC------CccccCC-------------
Confidence 99999999999999999999988875 899998877665443332222111110 0000000
Q ss_pred CCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccc
Q 014628 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
+ ...++.++++..+...+..++....+.....|.|.++++ .+.+..
T Consensus 195 ------------------~---------------~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~ 240 (393)
T PRK09705 195 ------------------T---------------TTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQ 240 (393)
T ss_pred ------------------C---------------cCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChh
Confidence 0 001123355666666666666677788888999999987 576654
Q ss_pred hh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHhccCch
Q 014628 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.. ....+..++.+++.++.+++.||.++| +....+..+.......... ..+.... ...+.+++.+...+..
T Consensus 241 ~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~l~g~g~g~~~~~~ 313 (393)
T PRK09705 241 YSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCGFIWLPLQLPVL--WAMVCGLGLGGAFPLC 313 (393)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHHHHHccchHHHH--HHHHHHHhccchHHHH
Confidence 44 445677788999999999999999987 5555554444443333222 2222211 2233455555555555
Q ss_pred hhhhhcccC-CchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 319 NYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 319 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.....+..+ ++++++..|+.+...+. +..++|.+.|++.|..|++...+.+...+.+...+..
T Consensus 314 ~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~ 377 (393)
T PRK09705 314 LLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIIT 377 (393)
T ss_pred HHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHH
Confidence 555566665 47899999999766666 7788999999999999888777777776655544433
No 19
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=8.3e-33 Score=249.91 Aligned_cols=313 Identities=17% Similarity=0.143 Sum_probs=240.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh-----hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
++.+++++++|+++||+|||+++..+.++..++.++..+++ +++.+++.|+++|++.+...+...+++.|++|++
T Consensus 45 ~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~ 124 (365)
T TIGR00900 45 LPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEE 124 (365)
T ss_pred HHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Confidence 45678899999999999999999999999999999888888 9999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
+|++++++.+.+..+|.+++|.+++.+.+..|||+.|++.++..++..+..+...++..+. +++++ .
T Consensus 125 ~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~--------- 191 (365)
T TIGR00900 125 QLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPELAA---SEIQA-L--------- 191 (365)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhcccccCCC---ccccc-c---------
Confidence 9999999999999999999999999999999999999998876665554444332211100 00000 0
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHH-HHhhHHHHHhh
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGPKAGYNIY 235 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 235 (421)
++ +..++..+.++.++++|.++...+..+.......... .+.|.+.++..
T Consensus 192 -------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (365)
T TIGR00900 192 -------------SN----------------AVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYL 242 (365)
T ss_pred -------------ch----------------hHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 00 0001112345667788888887777666666666665 78899888877
Q ss_pred CCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHh
Q 014628 236 HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-LYGFLALFTVGELLVFA 313 (421)
Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 313 (421)
+.++... .......++.+++.++.+++.||.+++ +.+..+..............++ .+...+..++.+++.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 317 (365)
T TIGR00900 243 GRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGP 317 (365)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHH
Confidence 7775444 344566788889999999999999887 5555544444444444443342 55556667777787777
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
..+....+..+.+|+++|+++.|+.+...+. +..++|.+.|.+.|..|
T Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 318 INVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 7888888999999999999999999777666 88899999999998653
No 20
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=6.1e-33 Score=261.04 Aligned_cols=352 Identities=14% Similarity=0.098 Sum_probs=234.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|+++++++.|+++||+|||++++++.++.+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|+++
T Consensus 138 ~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~e~~~~~~r~~~ 217 (505)
T TIGR00898 138 VGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIGGIWVQAVVLNTEFLPKKQRAIV 217 (505)
T ss_pred HHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhccchHHHHHHHhheecChhhhHHH
Confidence 57889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
.++...+..+|.++++.++..+.+ ||+.|++.+++.++..+.. ++.||++++...+++.++ ..+..++..+.+.
T Consensus 218 ~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~-~~~~esp~~l~~~~~~~~--a~~~l~~~~~~~~ 291 (505)
T TIGR00898 218 GTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLS-WFVPESPRWLISQGRIEE--ALKILQRIAKING 291 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHH-HhcCCChHHHHHCCCHHH--HHHHHHHHHHHcC
Confidence 999999999999999999877654 9999999998877766655 556887765322222111 1111111111111
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.....+......+++..+++ ...+.++++++|.++...+......+......+..+.+..+ .+.+ .
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~ 357 (505)
T TIGR00898 292 KKLPAEVLSLSLEKDLSSSK-----------KQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYGLVLDLGN-LGGN--I 357 (505)
T ss_pred CCCCHHHHhhhhhhhhhhcc-----------CCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHhccccc-cCCC--h
Confidence 00000000000000000000 01245677788887766655443333322222222222222 2222 1
Q ss_pred hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHHHhccCchh
Q 014628 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--YGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.....+..+..+++.++.+++.||+||| +.+....++.++.++.....++. +......++.+++....++..+
T Consensus 358 ~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 432 (505)
T TIGR00898 358 YLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVY 432 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2223445677788999999999999998 66666666555555544443322 3344445555666666677778
Q ss_pred hhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.+..|.+|++.|+++.|+.+...+. |++++|.+.+ +.+ .+ +..++.+.+.+.+++.++.
T Consensus 433 ~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~~~~~~~~~~~~ 491 (505)
T TIGR00898 433 LYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLFGGLALLAGILT 491 (505)
T ss_pred HHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHHHHHHHHHHHHH
Confidence 8899999999999999999766665 9999998888 443 23 3355555555554444443
No 21
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=7.1e-33 Score=257.61 Aligned_cols=347 Identities=14% Similarity=0.140 Sum_probs=242.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh--hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...+....++.|++|+++|+
T Consensus 87 ~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~~~~~~~~~~~~r~ 166 (465)
T TIGR00894 87 YGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVSPATHKIIVKWAPPKERS 166 (465)
T ss_pred HHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccchhhHHHHHHhcCCHHHHH
Confidence 5788999999999999999999999999999998887554 56888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhHHHhHHhhhhcc-hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 80 AWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+++++...+..+|.++++++++.+.+.. +||+.|++.++++++..++.+.+.||+++..+. ..+.. .+. .
T Consensus 167 ~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~-~~~----i-- 237 (465)
T TIGR00894 167 RLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC--ISKFE-KKY----I-- 237 (465)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC--CCHHH-HHH----H--
Confidence 9999999999999999999999999884 999999999998887777776665554322110 00000 000 0
Q ss_pred ccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
++..+++.++.+ ...+++++++++.++...+..++.....+.+.+|+|.|+++..+.+
T Consensus 238 -----------~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s 295 (465)
T TIGR00894 238 -----------NSSLQGQKGSTR-----------QSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVS 295 (465)
T ss_pred -----------HhhcccccCCCC-----------CCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 000000000000 0124667889999999999888888889999999999999988888
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhH----HHHHHHHHH-HHHHHHHHh-hhhhHHHHHHHHHHHHHH
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLG-AISCLTAFC-LSSLYGFLALFTVGELLV 311 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 311 (421)
.... ....++.++.+++.++.|+++||+++|+...+. ......... ....+.... ..+....++.+.+.+++.
T Consensus 296 ~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 375 (465)
T TIGR00894 296 GKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVS 375 (465)
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHh
Confidence 6555 444677888999999999999998765322111 111111111 111111111 223333333444444444
Q ss_pred HhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc--ccchhhhHHHHHHHHHHHHH
Q 014628 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~ 381 (421)
+...+.......+.. ++.+|.+.|+.+..... +..++|.+.|.+.+.. +.|...+.+.++..+++.++
T Consensus 376 ~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~ 445 (465)
T TIGR00894 376 SGPLAGVLINSLDLA-PRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIF 445 (465)
T ss_pred hhhhhhhhhchhhcC-hhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 434343333444444 56899999999766665 8888999999888753 44666666666555555443
No 22
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-32 Score=250.12 Aligned_cols=322 Identities=12% Similarity=0.025 Sum_probs=236.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|++.+..++.....+.|++| ++|+++
T Consensus 49 ~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~ 127 (377)
T TIGR00890 49 IGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLA 127 (377)
T ss_pred HHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHH
Confidence 5678999999999999999999999999999999999999999999999999999999888888888999987 569999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
.++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+..+++.|+.+++. +++..
T Consensus 128 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------- 189 (377)
T TIGR00890 128 SGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPPGQL----IKTNI-------------- 189 (377)
T ss_pred HHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCchhc----cccCc--------------
Confidence 999999999999887777777777789999999999888887777666654321110 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.+ ++ ..+.++.++++.++...+..++..........+.+.+.++ .+.+...
T Consensus 190 ------~~~--------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 241 (377)
T TIGR00890 190 ------EVS--------VK-------------DYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGF 241 (377)
T ss_pred ------ccc--------hh-------------hhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 000 00 0123455677777776666655555555555666666655 4555433
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHHHhccCch
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS--LYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
. ....+..+..+++.++.+++.||++|| +.+..+........+.....++ .........+.+++.+...+..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 316 (377)
T TIGR00890 242 LVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLF 316 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhcc
Confidence 3 445667788899999999999999988 6665555555554444433332 2222233444555555556666
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHH
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 377 (421)
.....|.+|+++|+++.|+.+...+. |..++|.+.|.+.+..| |...+.+.+.+.++
T Consensus 317 ~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f~~~~~~~~~ 373 (377)
T TIGR00890 317 PSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTFIVTGAFALT 373 (377)
T ss_pred HHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHHHHHHHHHHH
Confidence 77888999999999999999766665 88999999999999876 76777666655443
No 23
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.6e-32 Score=254.47 Aligned_cols=337 Identities=12% Similarity=0.028 Sum_probs=224.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++++++.++++++++++.++++|+++|++.+... ....+++|++|+++|+++
T Consensus 82 ~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~~~~~~-~~~~~i~~~~~~~~rg~a 160 (476)
T PLN00028 82 SGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFSLATFV-SCQYWMSTMFNGKIVGTA 160 (476)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHhhH-HHHHHHHHhcChhheeHH
Confidence 4677899999999999999999999999999999999999999999999999999988654 456788999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhh----h-----cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 152 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~----~-----~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 152 (421)
+++.....++|..+++.+.+.+. + ..|||+.|++.+++.++..++.+++.++.++. +.++. ++
T Consensus 161 ~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~~~~~~~p~~-----~~~~~--~~- 232 (476)
T PLN00028 161 NGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVLTLGQDLPDG-----NYREL--KK- 232 (476)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHHHHcCcCCCC-----chhhH--Hh-
Confidence 99998877777777766654442 2 25899999999998887776666553321110 00000 00
Q ss_pred ccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014628 153 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
+ ...++ .+..+.+++.++++++|...+..+........+..+.|.|+.
T Consensus 233 --------------~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~ 280 (476)
T PLN00028 233 --------------S--------GTMPK----------DSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFY 280 (476)
T ss_pred --------------c--------Ccccc----------ccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 0 00000 000123455677888887777666555556667788999998
Q ss_pred HhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchh--hHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 014628 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA--FKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
+..+.+.... .+..+..++.+++.++.|+++||++||...+ .........+..+.++.....++.+...+.+++.++
T Consensus 281 ~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~ 360 (476)
T PLN00028 281 DRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSI 360 (476)
T ss_pred HhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHH
Confidence 8888876544 4456778899999999999999998763221 122222333332322333333333333444444455
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc--cccchhhhHHHHHHHHHHHHHHHHh
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--VNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--~g~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
+.+...+....+..+ +.+++++++.|+.+. ++.+++.+.+++.+. .++|...|.+.+++.+++.++.+..
T Consensus 361 ~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~-----~g~lg~~i~~~l~~~~~~~~y~~~f~~~~~~~~i~~~~~~~~ 432 (476)
T PLN00028 361 FVQAACGATFGIVPF-VSRRSLGVISGLTGA-----GGNVGAVLTQLLFFTGSSYSTETGISLMGVMIIACTLPVAFI 432 (476)
T ss_pred HHHHhhhhhcccCcc-cChhhchhhhhhhhc-----cccHHHHHHHHHHHhcCCccHhhHHHHHHHHHHHHHHHHHhe
Confidence 444444444444444 456788988888743 333455555565543 3458788888877777766665544
No 24
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1e-31 Score=243.49 Aligned_cols=312 Identities=14% Similarity=0.101 Sum_probs=227.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+|+|+++
T Consensus 66 ~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a 145 (394)
T PRK10213 66 FVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPKA 145 (394)
T ss_pred HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHH
Confidence 35678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+.++|..++|.+++.+.+.+|||+.|++.++++++..+......||.++ +++..
T Consensus 146 ~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~------~~~~~-------------- 205 (394)
T PRK10213 146 LSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG------EPSHQ-------------- 205 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc------ccccc--------------
Confidence 9999999999999999999999999999999999887666544443333344210 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHh-hHHHHHhhCCccc
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG-PKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 240 (421)
.++.+..+++|.++...+..++..........+. |.+. +..+.++.
T Consensus 206 --------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~ 252 (394)
T PRK10213 206 --------------------------------KQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVD 252 (394)
T ss_pred --------------------------------hhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChh
Confidence 0123356678888876665555555555656666 5554 45677755
Q ss_pred hh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchh
Q 014628 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
.. .......++.+++.++.+++.||.+++ .............+++....++.+......++.+++.+...+...
T Consensus 253 ~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~ 327 (394)
T PRK10213 253 GLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWS 327 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 44 334556678888888999999985433 333333333333333333344555555566677777777777777
Q ss_pred hhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
+.+.+..| ++++++.+......+. |..+||.+.|++.|..| +...+...+.+
T Consensus 328 ~~~~~~~~-~~~~~~~~~~~~~~~l-g~~~G~~l~G~l~~~~g-~~~~~~~~~~~ 379 (394)
T PRK10213 328 TWITRSLA-DQAEKAGSIQVAVIQL-ANTCGAAIGGYALDNIG-LTSPLMLSGTL 379 (394)
T ss_pred HHHHHHCc-ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhhHHHHHHHH
Confidence 77888776 4566777766444444 88999999999999876 44555554443
No 25
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=5.9e-32 Score=248.75 Aligned_cols=306 Identities=14% Similarity=0.135 Sum_probs=206.7
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHH--------HHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
.+++++.|+++||+|||++++.+.+++.+++++++++++++. ++++|+++|++.+...+....+++|++|++
T Consensus 70 ~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~ 149 (434)
T PRK15075 70 PLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPG 149 (434)
T ss_pred hhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcc
Confidence 467889999999999999999999999999999999999874 688999999999999998999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhh
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQV 148 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 148 (421)
+|++++++...+.++|..+++.+++.+. +.+|||++|++..+.. +..++ .++.+ +|+++...
T Consensus 150 ~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f~~~~~~~----~~~~~-~~~~~-----~e~~~~~~ 219 (434)
T PRK15075 150 RKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPFLIGCLIV----PFIFL-IRRSL-----EETEEFLA 219 (434)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHHHHHHHH----HHHHH-HHHhc-----CCCHHHHH
Confidence 9999999999998888888888777653 4679999999764332 11111 11111 11100000
Q ss_pred hhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHH-HHHHHHHHHHHHHHHHHh
Q 014628 149 VASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 227 (421)
.+. +. +.+ +.++...+++..+.. .+..+.....++....|.
T Consensus 220 ~~~---------------------------~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (434)
T PRK15075 220 RKH---------------------------RP--------SMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYT 261 (434)
T ss_pred hhh---------------------------cc--------ccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000 00 000 012222333333332 222333455567788899
Q ss_pred hHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH-HH-H--hhhhhHHHHH
Q 014628 228 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-F--CLSSLYGFLA 302 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~--~~~~~~~~~~ 302 (421)
|.|+++..+.+..+. ....+..++++++.++.|+++||++|| +.............. .. . ..++......
T Consensus 262 p~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 336 (434)
T PRK15075 262 PTFGKTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLA 336 (434)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHH
Confidence 999998878875544 334566778889999999999999988 544443322222111 11 1 1122222222
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 363 (421)
...+.+++.+...+....+..|.+|++.|+++.++.+.....+++.++|.+.|++.|..|.
T Consensus 337 ~~~~~~~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 337 VELWLSFLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 2333444555555556677889999999999999975555654567789999999998773
No 26
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=9.7e-32 Score=243.37 Aligned_cols=322 Identities=15% Similarity=0.154 Sum_probs=229.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.+...+....++.|++|+++|+++
T Consensus 49 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (382)
T PRK10091 49 LGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAA 128 (382)
T ss_pred HHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHH
Confidence 56789999999999999999999999999999999999999999999999999999998888888999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++..||.++. ++.+ .
T Consensus 129 ~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~~----~~~~-~-------------- 189 (382)
T PRK10091 129 VAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRDE----AKGG-L-------------- 189 (382)
T ss_pred HHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCcc----cccC-H--------------
Confidence 99999999999999999999999989999999999988777666555555653110 0000 0
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.+.+ +.++++..+......++..........+.+.++.+..+.++..
T Consensus 190 --------------------------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 236 (382)
T PRK10091 190 --------------------------------REQF-HFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETS 236 (382)
T ss_pred --------------------------------HHHH-HHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 0011 2345565655554444444444455566777787777777654
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-hhhhhHHHHHHHHHHHHHHHhccCchh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .+.....++.+++.++.+++.||++++ +.+.....+..+..+... ..++.+...+..++.+.+.....++..
T Consensus 237 ~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 311 (382)
T PRK10091 237 MTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQ 311 (382)
T ss_pred HHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4 444677788999999999999999987 555555444444433332 233333333344444444433333333
Q ss_pred h-hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 320 Y-VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 320 ~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
. ...+..+++.++.+. .+...+. |..+||.+.|++.|..++|...+...+....+......
T Consensus 312 ~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (382)
T PRK10091 312 ILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLL 373 (382)
T ss_pred HHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHH
Confidence 3 333434445555543 3344444 99999999999999877788888877666555554444
No 27
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.8e-32 Score=248.03 Aligned_cols=322 Identities=10% Similarity=0.011 Sum_probs=230.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh-----hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|+++|++.+...+...+++.|++|++
T Consensus 63 l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 142 (417)
T PRK10489 63 GAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRE 142 (417)
T ss_pred HHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHH
Confidence 467789999999999999999999988887776665442 567899999999999999988888999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
+|+++.++.....++|..+||.+++.+.+..+|++.|++.++..++..++.+ ..|+.+++. ++++
T Consensus 143 ~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~---~~~~----------- 207 (417)
T PRK10489 143 NLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLL-RLPALPPPP---QPRE----------- 207 (417)
T ss_pred HHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH-hCCCCCCCC---cccc-----------
Confidence 9999999999999999999999999999888999999988877665554433 335422110 0000
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
+..++..+.++.++++|.++...+..++.. .......+.|.|.++..+
T Consensus 208 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~g 255 (417)
T PRK10489 208 -------------------------------HPLRSLLAGFRFLLASPVVGGIALLGGLLT-MASAVRVLYPALADEVWQ 255 (417)
T ss_pred -------------------------------cchHHHHHHHHHHHcChHHHHHHHHHHHHH-HHHhHHHhhHHHHHhccC
Confidence 000011233555667777666555444332 245667788999988777
Q ss_pred Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhcc
Q 014628 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
.++... .+.....++.+++.++.+++.||.+++ +.+..+..............++.+...+..++.+++.+...
T Consensus 256 ~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 330 (417)
T PRK10489 256 MGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISS 330 (417)
T ss_pred CChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHH
Confidence 775444 334566778888999999999886554 44444444444444444444555555555666666666555
Q ss_pred CchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHH
Q 014628 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 377 (421)
+...+++.+..|++.|++++|+.+...+. |..++|.+.|++.|..|. ...+...+.+..+
T Consensus 331 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g~-~~~~~~~~~~~~~ 390 (417)
T PRK10489 331 LLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMTP-VASASASGFGLLI 390 (417)
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhch-hhHHHHHHHHHHH
Confidence 56677888999999999999999765555 999999999999998773 3455544444333
No 28
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=2.7e-32 Score=255.28 Aligned_cols=350 Identities=15% Similarity=0.117 Sum_probs=211.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh------------hhHHHHHHHHHHhhhhhhhhccchhhhh
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFI 69 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~~~~~~~~~~~~~i 69 (421)
+|.+++++++|+++||+|||++++.+.++..++.+.++++ ++++.++++|+++|++.|...+...+++
T Consensus 66 ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i 145 (479)
T PRK10077 66 IGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYI 145 (479)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHH
Confidence 5788999999999999999999999999999998887763 2356788999999999999999999999
Q ss_pred hccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Q 014628 70 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 141 (421)
Q Consensus 70 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (421)
+|++|+++|++++++.+.+..+|.++++.+++.+. +.+|||+.|++.+++.++..+. .++.||++++...+
T Consensus 146 ~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~ 224 (479)
T PRK10077 146 AEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSR 224 (479)
T ss_pred HhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHc
Confidence 99999999999999999999999999988776553 4568999999988877776544 44567765432111
Q ss_pred cccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHH---HHHHHHHHH
Q 014628 142 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN---VLGYIAYNF 218 (421)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 218 (421)
++.++ .+...++....+ +..+..++.. +..++..+..+..+........ ....+....
T Consensus 225 ~~~~~--~~~~~~~~~~~~---~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (479)
T PRK10077 225 GKQEQ--AEGILRKIMGNT---LATQALQEIK--------------HSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFV 285 (479)
T ss_pred CCHHH--HHHHHHHHcCCh---hHHHHHHHHH--------------HHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHh
Confidence 11110 000000000000 0000000000 0000000000001110000000 011111112
Q ss_pred HHHHHHHHhhHHHHHhhCCccch-hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh--h
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S 295 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 295 (421)
.++...++.|.+.++ .+.+... ........+..+++.+++++++||++|| +.+..+..+..+........ .
T Consensus 286 ~~~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~ 359 (479)
T PRK10077 286 GINVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYT 359 (479)
T ss_pred ChhHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhc
Confidence 233445667777665 4554332 2334556677889999999999999998 66665555544444333211 1
Q ss_pred h-h-HHHHHHHHHHHHHHHhc-cCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh------hccccchh
Q 014628 296 S-L-YGFLALFTVGELLVFAT-QAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRK 366 (421)
Q Consensus 296 ~-~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~ 366 (421)
+ . .......++.+++.... .+..+.++.|.+|+++|++++|+.+...+. +.++++.+.+.+. |..+ +..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~ 437 (479)
T PRK10077 360 QAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGF 437 (479)
T ss_pred CcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-Ccc
Confidence 1 1 12222233333333332 245678889999999999999999666555 7777766665444 4444 335
Q ss_pred hhHHHHHHHHHHH
Q 014628 367 TTLALTSIFFLAA 379 (421)
Q Consensus 367 ~~~~~~~~~~~~~ 379 (421)
.+++.+...+++.
T Consensus 438 ~~~~~~~~~~~~~ 450 (479)
T PRK10077 438 SYWIYGCMGVLAA 450 (479)
T ss_pred HHHHHHHHHHHHH
Confidence 5555554444333
No 29
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=2.4e-32 Score=248.22 Aligned_cols=333 Identities=15% Similarity=0.172 Sum_probs=235.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 41 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 120 (379)
T TIGR00881 41 IAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTW 120 (379)
T ss_pred HHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheee
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHH-HhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~-~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++.+.+..+|..++| .++..+.+..+||+.|++.+++.++..++.++..||.++..+.++.++..
T Consensus 121 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 187 (379)
T TIGR00881 121 VSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSCGLPPAEEMP------------- 187 (379)
T ss_pred EeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCccccccCccccCc-------------
Confidence 9999999999999999 57777777889999999998887777776666666543321111000000
Q ss_pred CCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccc
Q 014628 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
+++.++. .+.++++. +......+.++++|.++...+..++.......+..+.|.|+.+..+.++.
T Consensus 188 -~~~~~~~----~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 252 (379)
T TIGR00881 188 -NEEPDGD----AEKKEEEL----------TKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKE 252 (379)
T ss_pred -ccccccc----cccccccc----------cchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH
Confidence 0000000 00000000 00012345667888888888888888888888889999999888888765
Q ss_pred hh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHHhccCc
Q 014628 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
.. .......++.+++.++.+++.||..++++. ................... ..+.........+.+.+.....+.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 330 (379)
T TIGR00881 253 KASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--PLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQML 330 (379)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhhHH
Confidence 44 344666788899999999999986543211 1111111111122222211 123333333334444444444444
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchh
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 366 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 366 (421)
......+.+|++.|+++.|+.+...+. |..++|.+.|.+.|..| |+.
T Consensus 331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 331 IGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHhhc-ccc
Confidence 566788889999999999999766666 88899999999999866 543
No 30
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=2.5e-31 Score=241.74 Aligned_cols=324 Identities=12% Similarity=0.086 Sum_probs=234.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|++.||+|||+++..+.++..++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 53 ~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~ 132 (394)
T PRK03699 53 AGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSR 132 (394)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhh-cchhHHHHHHHHHHHHHHHHHHHhcc-cccccccCCccccchhhhhhcccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~-~~~wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
++..+....+|..++|.+.+.+.+ ..+||+.|.+.+++.++..++.++.. |+ +++++..
T Consensus 133 ~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~-------~~~~~~~------------ 193 (394)
T PRK03699 133 LLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA-------LGKHAPK------------ 193 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc-------ccccCcc------------
Confidence 999999999999999999887754 57999999998887766655443321 11 0000000
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+. + +. .+. ..++.++...+..++.....+.+..|.|.|+++.++.+.
T Consensus 194 ~~--------------~-~~-----------------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~ 240 (394)
T PRK03699 194 AD--------------K-PV-----------------AKE-KWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSL 240 (394)
T ss_pred cc--------------C-cc-----------------ccc-cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCh
Confidence 00 0 00 000 013445555555666666677888999999988888886
Q ss_pred chh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.+. .+.....++..++.++.++++||+++| +.+.....+...........++.+...+..++.+++.+..++..
T Consensus 241 ~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~ 315 (394)
T PRK03699 241 EDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTI 315 (394)
T ss_pred HHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 544 444666788899999999999999998 55554444444444444334444444445555666666666666
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHh
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
.....+..| +.+++..+..+...+ +|..++|.+.|++.|..| +...++...++.+++.+..+..
T Consensus 316 ~~~~~~~~~-~~~~~~~g~~~~~~~-~g~~i~p~~~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 316 ITLGSQQTK-VASPKLVNFILTCGT-IGTMLTFVVTSPIVAHFG-LQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHcc-CCCHHHHHHHHHhhh-HHHHHHHHHHHHHHHHhC-chhhhhhhHHHHHHHHHHHHHH
Confidence 666666554 445677787755555 499999999999999877 6677776666665555544433
No 31
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=4.7e-31 Score=241.25 Aligned_cols=310 Identities=13% Similarity=0.035 Sum_probs=230.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+..+..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|.++
T Consensus 59 ~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 138 (406)
T PRK15402 59 AGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKI 138 (406)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999998888899999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||+.++.+ ++.
T Consensus 139 ~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~----------------- 199 (406)
T PRK15402 139 TALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETAGRVG--EKL----------------- 199 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCCcccc--ccc-----------------
Confidence 9999998899999999999999998999999999988877766655555565321100 000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.++..++++.++++|.++...+...+..........+.|.++.+..+.++..
T Consensus 200 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~ 252 (406)
T PRK15402 200 ---------------------------SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYE 252 (406)
T ss_pred ---------------------------cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHH
Confidence 00111234567788898888777666666666666777888888877777654
Q ss_pred hHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh-----hhhhHHHHHHHHHHHHHHHhcc
Q 014628 242 MMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-----LSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
... .....++.+++.++.+++.||+++| +.+................ ..+.+.......+.+++.+...
T Consensus 253 ~g~~~~~~~~~~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~ 327 (406)
T PRK15402 253 YGLLQVPVFGALIAGNLTLARLTSRRPLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLAN 327 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHh
Confidence 433 2344567788899999999999887 5554444433333222221 1233334455556666666655
Q ss_pred CchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
+........ .++++++++.+..+..... +..+|+.+.+.+.+..+.+
T Consensus 328 ~~~~~~~~~-~~~~~~g~~~~~~~~~~~~-~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 328 AGLYRLTLF-SSDVSKGTVSAAMGMLSML-IFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred hhHHHHHhh-hccccccHHHHHHHHHHHH-HHHHHHHHHHhcccCCchH
Confidence 555554443 3458999999999766655 8888999999998877644
No 32
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.6e-31 Score=246.17 Aligned_cols=316 Identities=14% Similarity=0.105 Sum_probs=215.1
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|+++|++.+...+....++.|++|+|+|+++
T Consensus 64 ~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~ 143 (426)
T PRK12307 64 IGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKA 143 (426)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHh
Confidence 56788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|.++++.+.+.+.+..+||+.|++..+..++ .+......||+.++ ...+. ++..+
T Consensus 144 ~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~---------~~~~~-----~~~~~ 208 (426)
T PRK12307 144 SAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEW---------EEAKL-----SGKGK 208 (426)
T ss_pred hhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHH---------HHhhh-----hcccc
Confidence 99999999999999999999998889999999986433222 11111111221110 00000 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHH---HHHHHHHHHHHhhHHHHHhhCCc
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA---YNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
+.+ ..+++...+.+++++++.++........ .....+.+..++|.|+++. +.+
T Consensus 209 ---------------~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 264 (426)
T PRK12307 209 ---------------HSQ--------SAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGE-GFD 264 (426)
T ss_pred ---------------ccc--------cchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCC
Confidence 000 0000111235566777776554432222 2223334567889888874 555
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH--Hhcc
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV--FATQ 315 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 315 (421)
+... .......++.+++.++.+++.||++|| +....+.++..+..+...............++.+.+. ....
T Consensus 265 ~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (426)
T PRK12307 265 TGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVG 339 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHh
Confidence 4333 334566788899999999999999987 5555555444443333322221111111222222211 1222
Q ss_pred CchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+.....+.+.+|++.|++++|+.+...+. ++.++|.+.|++.+..|
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAATWLGITMG 385 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence 34556778999999999999999766666 88899999999999876
No 33
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=1.3e-31 Score=245.52 Aligned_cols=337 Identities=11% Similarity=0.063 Sum_probs=228.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 58 ~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~ 137 (405)
T TIGR00891 58 ISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKA 137 (405)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHH
Confidence 46788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcch--hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
+++.+.+..+|.++++.+++.+.+..+ ||+.|++.+++.++.. +.....||++++.+++++.+..
T Consensus 138 ~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------ 204 (405)
T TIGR00891 138 SGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------ 204 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------
Confidence 999999999999999999999887766 9999998765544433 3333345532211000000000
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhh--cchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCC
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL--QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
.+..++....++..+ ...++.....+... +.+.+..........+........+.|.|+.+..+.
T Consensus 205 ------~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (405)
T TIGR00891 205 ------RTMVDILYGGEHRIA-------NIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL 271 (405)
T ss_pred ------hhHHHHHhccchhhh-------hhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence 000000000000000 00000001111111 111122223333333444556667889999888887
Q ss_pred ccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH-HHHhhhhhHHHHHHHHHHHHHHHhcc
Q 014628 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAFCLSSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (421)
+..+. .+.....++.+++.++.+++.||+++| +.+..+......... .....++.+...+..++.+++.....
T Consensus 272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (405)
T TIGR00891 272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIW 346 (405)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccch
Confidence 76544 344667788899999999999999998 555544443322222 22222333334444345555555666
Q ss_pred CchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHH
Q 014628 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 370 (421)
+.....+.+.+|++.|++++|+.+...+. |..++|.+.|.+.|+.|.|...+..
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 347 GILPKHLGEYFPTDQRAAGLGFTYQLGNL-GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred hhHHHHHhhhCCcchhHHHhhHHHHHHHH-HHHHHHHHHHHHHHhccccchhHHh
Confidence 67778889999999999999999776666 8899999999999998877554443
No 34
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=5.7e-31 Score=239.11 Aligned_cols=302 Identities=14% Similarity=0.112 Sum_probs=217.3
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..+.+++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+++++
T Consensus 59 ~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 138 (400)
T PRK11646 59 QQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFS 138 (400)
T ss_pred HHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 34557899999999999999999999999999999999999999999999999999888999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCc
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 163 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (421)
+.+...++|..+||.+++.+. .++||+.|++.++..++..++..+..||... +++..
T Consensus 139 ~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~------~~~~~---------------- 195 (400)
T PRK11646 139 LLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL------STVRT---------------- 195 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc------cccch----------------
Confidence 999999999999999999998 6799999999988776665555444444110 00000
Q ss_pred ccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhH
Q 014628 164 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM 243 (421)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+..+++++++++|.++...+..+...........+.|.|.++.++.+.....
T Consensus 196 ----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 247 (400)
T PRK11646 196 ----------------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAGSPSAVKW 247 (400)
T ss_pred ----------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcCCchHHHH
Confidence 0012345666777777655544444444444556789998887664432223
Q ss_pred HHhhhhHHHHHHhhhhhHHHhh-hccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhh
Q 014628 244 FGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
......+....+....+++.|| .+.+ +.+..+..+...........++.+...+...+.+.+.+...+...+..
T Consensus 248 l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~~~~ 322 (400)
T PRK11646 248 MYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARETLS 322 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 3344444444444444555554 4433 333333333333333333444444444445556666667777788889
Q ss_pred hcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.+..|+++|+++.|+.+...+. |..+||.+.|++.|..+
T Consensus 323 ~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~ 361 (400)
T PRK11646 323 ASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGK 361 (400)
T ss_pred HhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHh
Confidence 9999999999999999766666 99999999999999864
No 35
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.7e-31 Score=249.14 Aligned_cols=342 Identities=13% Similarity=0.081 Sum_probs=242.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccC-CCCCchh
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTA 80 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~-~~~~r~~ 80 (421)
++++++.+++|+++||+|||++++.+.+++.++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|++
T Consensus 52 l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~ 131 (495)
T PRK14995 52 LVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNM 131 (495)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHH
Confidence 456788999999999999999999999999999999999999999999999999999999888888887765 6788999
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhc-------c
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV-------S 153 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~-------~ 153 (421)
+++++.....+|..+||.+++.+.++.+|||.|++...+.++..++.++..|+.+++. +++.+....... .
T Consensus 132 ~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~ 209 (495)
T PRK14995 132 ALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLV 209 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999998887777776666667643211 111110000000 0
Q ss_pred cccccccCCcccccccchh--------hhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQ--------ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
................... ......+. +.++...+ .+++++|.+....+..++.....++...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~--------~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~ 280 (495)
T PRK14995 210 YSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQL--------AASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFEL 280 (495)
T ss_pred HHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHh--------cCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000000000 00000000 00011112 3567888888877777777777888888
Q ss_pred HhhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh---hhhhHHHH
Q 014628 226 WGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LSSLYGFL 301 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 301 (421)
+.|.|+++.++.++....+ .....++..++.++.|++.||+++| +.+..+..+..+....... .++.+...
T Consensus 281 ~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~ 355 (495)
T PRK14995 281 LMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAW 355 (495)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHH
Confidence 9999999999998766644 3556678889999999999999987 5555444444433332221 12344445
Q ss_pred HHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
...++.+++.+...++......+.+|+++++.+.++.+...+. |..+|+.+.|.+.++
T Consensus 356 ~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 356 GLMALLGFSAASALLASTSAIMAAAPPEKAAAAGAIETMAYEL-GAGLGIAIFGLLLSR 413 (495)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCHHhcchHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 5667778888888888888888999999999999999766666 888899899888764
No 36
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.6e-32 Score=243.44 Aligned_cols=349 Identities=15% Similarity=0.156 Sum_probs=259.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh--hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.|+++++++.|+++||+|.|+++..+.++.++++++...+. +++.+++.|++||++.|..+|+...+.++|.|++||+
T Consensus 84 ~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~i~~~W~P~~Ers 163 (466)
T KOG2532|consen 84 WGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGSILAKWAPPNERS 163 (466)
T ss_pred HHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhceeeeECCHHHHH
Confidence 58899999999999999999999999999999999998775 4567799999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhhHHHhHHhhhhc-chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 80 AWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+..++..++..+|.+++.+++|.+.+. +||+++|++.++++++..++++++..|++.+++.-.+++ .
T Consensus 164 ~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h~~is~~E-l----------- 231 (466)
T KOG2532|consen 164 TFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKHPNISEKE-L----------- 231 (466)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCHHH-H-----------
Confidence 999999999999999999999999988 999999999999999988888777655433311111000 0
Q ss_pred ccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
+.+++...++..+++ ...+++++++++.+|...+..++.+...+.+..|+|.|+++..+++
T Consensus 232 --------~~I~~~k~~~~~~~~-----------~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~ 292 (466)
T KOG2532|consen 232 --------KYIEKGKSEAHVKKK-----------PPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFD 292 (466)
T ss_pred --------HHHHhcccccccCCC-----------CCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCC
Confidence 000111000000000 1247899999999999999999999999999999999999999999
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhcccc---chhhHHH-HHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHH
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATI---SNAFKLL-SAATFLGAISCLTAFCLS--SLYGFLALFTVGELLV 311 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 311 (421)
..+. .+.+++.+...+..+++|.++||+.+|. ...++.. .++....++.++.+...+ +.+..++++.+.....
T Consensus 293 v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~ 372 (466)
T KOG2532|consen 293 VRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLS 372 (466)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHc
Confidence 7665 5568999999999999999999987741 1123443 333344444444444333 2223333333333333
Q ss_pred HhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh-c-cccchhhhHHHHHHHHHHHHHHH
Q 014628 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-H-VNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~-~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+.. ............|++.+..+|+.+..... .++++|.+.|.+.. . ...|+..|++.+++.+++.+++.
T Consensus 373 g~~-~~Gf~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 373 GFN-ISGFYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFL 444 (466)
T ss_pred ccc-hhhhHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchhee
Confidence 333 22333333332578999999999877776 77889999999984 1 23688888888877777665443
No 37
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=3.8e-31 Score=243.70 Aligned_cols=350 Identities=12% Similarity=0.073 Sum_probs=232.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh----hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++..+++++.|+++||+|||+++..+.++.+++.++.++. ++++.+.+.|++.|++.+..++....++.|++|+++
T Consensus 72 ~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~ 151 (438)
T TIGR00712 72 IAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSE 151 (438)
T ss_pred HHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCccc
Confidence 4677899999999999999999999999999998887764 467788899999999999988889999999999999
Q ss_pred chhHHHHHHHHHHHHhhhHHHhHHhhh-hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 78 KTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++++++.+.++|..+++.+.+... ++.+||+.|++.++++++..+..+++.||.+++.+.++.++.
T Consensus 152 rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~---------- 221 (438)
T TIGR00712 152 RGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDTPQSCGLPPIEEY---------- 221 (438)
T ss_pred chhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCCHHhcCCCCchhc----------
Confidence 999999999999999999988776544 456899999999988888777666666664432110000000
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
+++.. .+ ..++ .+.+ .+.++. ..+.+++++.++...+..++.....+++.+|.|.|+++..+
T Consensus 222 ~~~~~----~~-~~~~-----~~~~------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g 283 (438)
T TIGR00712 222 RNDYP----DD-YNEK-----AEQE------LTAKEI--FMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKH 283 (438)
T ss_pred ccccc----cc-cccc-----cccc------cchHHH--HHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccC
Confidence 00000 00 0000 0000 000011 11246788888888777777777777888999999998878
Q ss_pred Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHH-HHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHH
Q 014628 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA-ATFLGAISCLTAFC--LSSLYGFLALFTVGELLVF 312 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 312 (421)
.++... ....+..+.++++.++.+++.||++++++ ..... .........+.... ..+.+......+..+++..
T Consensus 284 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 360 (438)
T TIGR00712 284 FALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNR---GATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFLIY 360 (438)
T ss_pred CChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCcc---cHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHc
Confidence 776544 33456667889999999999999965421 11111 11111111111111 1122222222222222221
Q ss_pred hccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 313 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
...........+.+|++.|+++.|+.+...+..|.+++|.+.|.+.|..| |...+.+..+..+++.+..+
T Consensus 361 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 361 GPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMVMIGGSILAVILLI 430 (438)
T ss_pred cHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHHHHHHHHHHHHHHHH
Confidence 11111123566888889999999999766666345689999999999876 77777766665555544443
No 38
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=1.1e-31 Score=251.66 Aligned_cols=364 Identities=13% Similarity=0.110 Sum_probs=226.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++.+++++++|+++||+|||++++.+.+++.++.+++.++ .+++.+++.|+++|++.+...+...+++.|++|+++|
T Consensus 82 ~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 161 (481)
T TIGR00879 82 VGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVPMYLSEIAPKALR 161 (481)
T ss_pred HHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhh
Confidence 4678999999999999999999999999999999998554 4456899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhH---HhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~---~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++++++++.+..+|..+++.++ ....+..+||+.|++.++..++.. +..++.||+++....+++.+.. .+...+
T Consensus 162 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~--~~~~~~ 238 (481)
T TIGR00879 162 GALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLF-LGLFFLPESPRWLVGKGRVEEA--RKSLAR 238 (481)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHH-HHHhcCCCChHHHHHcCChHHH--HHHHHH
Confidence 9999999999999999999999 666677899999999766555444 3444457654321111111110 000000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhh---cchhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL---QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
...... +..+..+.....+....... +..+..+....... +++.++...+..+...........+.|.+.+
T Consensus 239 ~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (481)
T TIGR00879 239 LRGTSG--EDKELLDELELIDIKRSIEK----RSVQPSWGSLFSSTRRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFE 312 (481)
T ss_pred HhCCCC--CcHHHHHHHHHHHHHHHHHH----hhccccHHHHHhcCchhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHH
Confidence 000000 00000000000000000000 00000011222222 2333333344333333334455667777766
Q ss_pred HhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH---h-hhh------hHHHH
Q 014628 233 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---C-LSS------LYGFL 301 (421)
Q Consensus 233 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~------~~~~~ 301 (421)
+ .+.+.... .......++.+++.++.+++.||++|| +.+..+..+..+..+... . ..+ ....+
T Consensus 313 ~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 313 N-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred H-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 5 45554333 444666788889999999999999988 555544444443333322 1 111 22222
Q ss_pred HHHHHHHHHHHhc-cCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 302 ALFTVGELLVFAT-QAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
....+...+.+.. .+....++.|.+|++.|+++.++.+...+. |.+++|.+.+.+.+..+ +...+++.+++.+++.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i 464 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-ANFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLI 464 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHH
Confidence 3333333333333 344455668888989999999999766665 88899999999998765 66677776666555544
Q ss_pred HH
Q 014628 381 IW 382 (421)
Q Consensus 381 ~~ 382 (421)
..
T Consensus 465 ~~ 466 (481)
T TIGR00879 465 FV 466 (481)
T ss_pred HH
Confidence 43
No 39
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=3.1e-31 Score=242.18 Aligned_cols=318 Identities=14% Similarity=0.088 Sum_probs=226.1
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHH--------HHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
..+++++.|+++||+|||+++..+.++..++.++++++++++ .+++.|+++|++.+...+....++.|++|+
T Consensus 48 ~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~ 127 (394)
T TIGR00883 48 RPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQGFSLGGEWGGAALYLAEYAPP 127 (394)
T ss_pred hhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHHHhhccccccccHHHhhhcCCc
Confidence 357889999999999999999999999999999999999875 478899999999999999999999999999
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhh--------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchh
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 147 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~--------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (421)
++|++..++.+.+..+|.++++.++..+. +.++||+.|++.+++.++.... ....||+++..+++++.+
T Consensus 128 ~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-- 204 (394)
T TIGR00883 128 GKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL-RRNLEETPVFEKAQEKHK-- 204 (394)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH-HHhcCCChhHHHHHhccc--
Confidence 99999999999999999999998876653 3568999999877655443322 222233221100000000
Q ss_pred hhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchh--HHHHHHHHHHHHHHHHHHHH
Q 014628 148 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV--YVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 225 (421)
+. ..+.++.++++. ++......++.....+....
T Consensus 205 ------------------------------~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (394)
T TIGR00883 205 ------------------------------KK--------------RGPIRETLTKHRKPFLLGLGLVIATTTTFYLITT 240 (394)
T ss_pred ------------------------------cc--------------cCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 00 011223334433 55555555666666777888
Q ss_pred HhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH-HHH-HHHHh--hhhhHHH
Q 014628 226 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA-ISC-LTAFC--LSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~--~~~~~~~ 300 (421)
+.|.|.++..+.++... .......+...++.++.+++.||++|| +.+.....+.. ... ..... .++.+..
T Consensus 241 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (394)
T TIGR00883 241 YLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-----PVLIIFTVLAALLAVPLLMALLDSGSFTLF 315 (394)
T ss_pred HHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHHHHHHHHHHHHHHhcCCchHHH
Confidence 99999987777765444 334566778889999999999999988 54443322222 221 11111 2344444
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHH
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 373 (421)
....++.+++.+...++......|.+|++.|+++.++.+...+.+|..++|.+.|++.|+.|.+...++....
T Consensus 316 ~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~ 388 (394)
T TIGR00883 316 FFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAA 388 (394)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHH
Confidence 5555666677777778889999999999999999998645555558889999999999987755444444433
No 40
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=1.1e-30 Score=238.45 Aligned_cols=316 Identities=13% Similarity=0.068 Sum_probs=221.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh--------hhHHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++++++++.|+++||+|||+++..+.++++++.+.+.++ .+++.+++.|+++|++.+...+....++.|++
T Consensus 62 ~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 141 (399)
T PRK05122 62 LATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRV 141 (399)
T ss_pred HHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhc
Confidence 4678899999999999999999999999988877766543 25778999999999999999999999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
|+++|++++++.+.+..+|.++|+.+++.+.+.+|||+.+++.++..++..+.. ...|+.+ +++.+ .
T Consensus 142 ~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~-~------ 208 (399)
T PRK05122 142 GALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLA-RPRPAVP-----PVKGE-R------ 208 (399)
T ss_pred ChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHH-hcCCCCC-----CCCcc-c------
Confidence 999999999999999999999999999999999999999888766543322221 1111110 00000 0
Q ss_pred cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
.+.++.++ ..+.......+....+.....+.|.|+.+
T Consensus 209 -----------------------------------------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (399)
T PRK05122 209 -----------------------------------------LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAA 245 (399)
T ss_pred -----------------------------------------hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111111 11111122233344455566778887766
Q ss_pred hhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHh
Q 014628 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
. +.+.. ........++.+++.++.+++.||+++| +.+.....+...........++.+...+...+.+++.+.
T Consensus 246 ~-~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~ 318 (399)
T PRK05122 246 R-GWDGA-ALALTLFGVAFVGARLLFGNLINRLGGL-----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSL 318 (399)
T ss_pred c-ccccc-hHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHH
Confidence 4 33322 2223456677788999999999999987 655555555555444444455555555566667777776
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
..+.......+..|+++|+++.|+.+...+. |..++|.+.|.+.|..| ++..+...+.+.+++.+..
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 385 (399)
T PRK05122 319 VFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGITGPLAGLVASWFG-YPSIFLAAALAALLGLALT 385 (399)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Confidence 6666667777889999999999999766666 77788889999999876 7777777666655544433
No 41
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=2.4e-30 Score=235.91 Aligned_cols=319 Identities=10% Similarity=0.034 Sum_probs=220.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++++++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|++.+...+....++.|++|+++|+++
T Consensus 62 ~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (413)
T PRK15403 62 AGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSICFIATVGYVTVQEAFGQTKGIKL 141 (413)
T ss_pred HHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 57788999999999999999999999999999999999999999999999999999987777778889999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++......+|..+||.+++.+.++.|||+.|++.+++.++..+..++..||+++. ++++. .
T Consensus 142 ~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~---~~~~~-~-------------- 203 (413)
T PRK15403 142 MAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR---GAVPF-S-------------- 203 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc---cCCCC-C--------------
Confidence 99999999999999999999999888999999999988777766555555664321 00000 0
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++..++++.++++|.++...+...+.....+.+..+.|.++++.++.++..
T Consensus 204 ----------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~ 255 (413)
T PRK15403 204 ----------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQ 255 (413)
T ss_pred ----------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHH
Confidence 0011245677889999998888777777777788888999999988888665
Q ss_pred hHHH-hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHH--HHHHHHHHHHHH--HhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 242 MMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSA--ATFLGAISCLTA--FCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 242 ~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
..+. .....+.+++..+.+++.++..+++ ..... ....+....... ...++.+..++..++.+.+.+...+
T Consensus 256 ~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p 331 (413)
T PRK15403 256 FAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFP 331 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhH
Confidence 5433 3344555666666666554433321 11111 111111111111 1122332234455556666666655
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
........ -....+|++.++.+..... +...++...+++.+. + -..++.....+
T Consensus 332 ~~~~~al~-~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~-~-~~~~~~~~~~~ 385 (413)
T PRK15403 332 TLFRFTLF-SNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFN-G-GRLPFHLLAVV 385 (413)
T ss_pred HHHHHHhc-cCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHc-C-CchHHHHHHHH
Confidence 55533321 1223478888888666555 556677788888776 2 22444444433
No 42
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.8e-30 Score=235.49 Aligned_cols=322 Identities=11% Similarity=0.054 Sum_probs=226.4
Q ss_pred cccchhhHHHHhhhhcCCchHHH-HHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+..+.+++.|+++||+||||.++ .+..+..++.++++++++++.+++.|+++|.+.+...|...+++.|+.|+++|++.
T Consensus 45 ~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~ 124 (375)
T TIGR00899 45 VGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFASTANPQLFALAREHADRTGREAV 124 (375)
T ss_pred HHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhhhHHHHHHHHHHHhhhcchhhH
Confidence 35677899999999999988755 45666677788889999999999999999988888888888899999887777654
Q ss_pred --HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 82 --LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 --~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.+....+.++|.++||.+++.+.+..+||+.|++.+++.++..++.++..||.+++.+ ++.+ .
T Consensus 125 ~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~------------ 189 (375)
T TIGR00899 125 MFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGAP--GALT-R------------ 189 (375)
T ss_pred HHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCcc--cccC-c------------
Confidence 6788888999999999999999998999999999998877777776666676432110 0000 0
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
.+.+..++++.++......++..........+.|.++++..+.++
T Consensus 190 -----------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 234 (375)
T TIGR00899 190 -----------------------------------LEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPD 234 (375)
T ss_pred -----------------------------------chhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCH
Confidence 011223455555554444444444445556678888888777775
Q ss_pred chhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 240 ADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.... .........+++.++.+++.||+++| +.+.................++.+.......+.+++.+...+..
T Consensus 235 ~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 309 (375)
T TIGR00899 235 KLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIG 309 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5443 22344455677788999999999988 55554444444333333334455555555555666666666666
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
..+..+..| +++++++++.+...+. |..++|.+.|.+.|..| ++..+...+.+.+++.+..
T Consensus 310 ~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~~~~~~ 370 (375)
T TIGR00899 310 MLYFQDLMP-GRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYWFAIVMLIVALFCL 370 (375)
T ss_pred HHHHHHhCc-chhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHH
Confidence 667777665 4567999999766665 98999999999999866 7677777666655555443
No 43
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.5e-30 Score=238.61 Aligned_cols=325 Identities=14% Similarity=0.129 Sum_probs=235.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+ ..+....++.|++|+++|+++
T Consensus 65 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (408)
T PRK09874 65 LFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALLGLLGG-FVPNANALIATQVPRNKSGWA 143 (408)
T ss_pred HHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhhh-hHHhHHHHHHHhcCHhhhhHH
Confidence 3567889999999999999999999999999999999999999999999999999865 567778889999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++..||..+.. ++++..
T Consensus 144 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-------------- 206 (408)
T PRK09874 144 LGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIRENFQPV---SKKEML-------------- 206 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccCcccc---cchhhh--------------
Confidence 999999999999999999999999899999999999887776666665555432110 000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHH-HHHHHHHHHHHHHHHHHhhHHHHHhhCCccc
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
+ .++..+.++++.++.. ................+.|.|..+..+....
T Consensus 207 ---------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (408)
T PRK09874 207 ---------------------------H----MREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSN 255 (408)
T ss_pred ---------------------------H----HHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH
Confidence 0 0011223455554432 2223333444445566777787775543321
Q ss_pred h----hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 241 D----MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 ~----~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
. ..+..+..++.+++.+..+++.||+++| +.+...........+.....++.+...+...+.+++.+...+
T Consensus 256 ~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 330 (408)
T PRK09874 256 IAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLP 330 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHH
Confidence 1 1222445567778888899999999988 555555555444444444444555555566667777777777
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.......+..|++++++..++.+..... |..++|.+.|.+.+..| |...|...+++.+++.+..
T Consensus 331 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~~~~f~~~~~~~l~~~~~~ 394 (408)
T PRK09874 331 AVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-FRAVFLVTAGVVLFNAVYS 394 (408)
T ss_pred HHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-hhHHHHHHHHHHHHHHHHH
Confidence 7777888888889999999998666565 99999999999999866 7778887776666555444
No 44
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-31 Score=242.38 Aligned_cols=323 Identities=16% Similarity=0.160 Sum_probs=227.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+||+++.+++|.+.||++..+.+....+++++..++....+|++.+++.|++.|+.++..+|....+++.|+.++||+..
T Consensus 92 v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r 171 (495)
T KOG2533|consen 92 VGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAILGNWYGKSERGLR 171 (495)
T ss_pred HHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhh
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhh------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVG------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++++.+..++|.++|++++..+. ...||||.|++.++++++.+++.++++|+.+.+..-.++.+..
T Consensus 172 ~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~P~~~~fl~~~ek~-------- 243 (495)
T KOG2533|consen 172 MGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDNPSKAWFLTDEEKE-------- 243 (495)
T ss_pred HHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCChhhccccchHHHH--------
Confidence 99999999999999999998863 4568999999999999999999999998865432111110000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
...++.++++.+...+ +..+..+++.+++|.+|...+..++.....+++.+|+|.++.+..
T Consensus 244 ------------~~~~~~~~~~~~~~~~-------~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~ 304 (495)
T KOG2533|consen 244 ------------LVVERLRESPSGGIEN-------KFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNG 304 (495)
T ss_pred ------------HHHHHHHhccCCCccc-------ccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCC
Confidence 0000000000000000 011356778889999999999999999999999999999999955
Q ss_pred CCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHH-HHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHh
Q 014628 236 HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL-SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 236 ~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
+++..+. .+.....++++++.+++|+++||++.-...+ ... ....+....+...+..................+...
T Consensus 305 ~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~-~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~ 383 (495)
T KOG2533|consen 305 GYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFARR-LLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIA 383 (495)
T ss_pred CcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHHH-HHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHH
Confidence 5765444 5667788999999999999999964111111 222 223333333333333333333333333333344444
Q ss_pred ccCchhhhhhcccCCchhh-HHHHHHHHHHHhhcccCcchh
Q 014628 314 TQAPVNYVCLHSVKPSLRA-LSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~g~~~~~~~ 353 (421)
..+.......+...++.|. +..+......+. +++++|.+
T Consensus 384 ~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s-~~~~~~~~ 423 (495)
T KOG2533|consen 384 TAIIALSWTSANLAGNTKALTTVSAIIDGTGS-AGAISGQL 423 (495)
T ss_pred HHHHHHhhccccccchHHhHHHHhhhhcchhH-HHHhhhhh
Confidence 5555566666666554433 333343333344 44444433
No 45
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.9e-31 Score=239.80 Aligned_cols=305 Identities=19% Similarity=0.288 Sum_probs=225.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++.+++.++..+++|++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 43 ~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 122 (352)
T PF07690_consen 43 LGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRA 122 (352)
T ss_dssp HHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhc
Confidence 45678999999999999999999999999999977777778888999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+.+.++|.+++|.+++.+.+..+||+.|++.+++.++..++..++.+++++..+.+++.+..
T Consensus 123 ~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~-------------- 188 (352)
T PF07690_consen 123 FGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRERESPKESE-------------- 188 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT--SSTTTT--------------
T ss_pred cccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcccccccccccccc--------------
Confidence 999999999999999999999999999999999999998888776555555433221111111000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc-cc
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS-NA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 240 (421)
. +..++..+.++.++++|.+|......+...........+.|.|+.+.++.+ ..
T Consensus 189 -------------~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 243 (352)
T PF07690_consen 189 -------------S------------KKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPS 243 (352)
T ss_dssp ---------------------------HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHH
T ss_pred -------------c------------ccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHH
Confidence 0 000000112556667777765555556666677778899999988888888 44
Q ss_pred hh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHH---HhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 241 DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---FCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 ~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
.. .+..+..+..+++.++.+++.||++++ +................ ...++.........+.+++.+...+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 318 (352)
T PF07690_consen 244 QAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFP 318 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 44 345667778888899999999999886 33333333222222222 2222344555566677778888888
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
.......+.+|+++++++.|+.+...+. |..++|
T Consensus 319 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 319 ILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 9999999999999999999999766665 766655
No 46
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=2.3e-30 Score=234.60 Aligned_cols=331 Identities=14% Similarity=0.083 Sum_probs=228.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+.++++|+++||+|||++++++.++.+++++.++++.+. ++.|+++|++.+...|...+++.|++|+++|+++
T Consensus 49 l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a 125 (393)
T PRK11195 49 LAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKA 125 (393)
T ss_pred HHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 5678899999999999999999999999999999888777664 7799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|.++||.+++.+.+. .|+..+.+.+...++. .+..+..||.+.+.++.+ .+..
T Consensus 126 ~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~-~~~~-------------- 188 (393)
T PRK11195 126 NGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRPGQS-WNPI-------------- 188 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCcccccccC-CCHH--------------
Confidence 9999999999999999999999885 4888887776554333 333444565322110000 0000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
...++..+..+.++++|.+........+.........+..|.++++.++.++..
T Consensus 189 --------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~ 242 (393)
T PRK11195 189 --------------------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQ 242 (393)
T ss_pred --------------------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhH
Confidence 001111233456677777665554444444445555666777888878887655
Q ss_pred hHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 MMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
..+ .....++.+++.+..+++.||.+++ +.+..+.... .........++.+.......+.+++.+...++..+
T Consensus 243 ~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~ 316 (393)
T PRK11195 243 PAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMG-LVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNA 316 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHH-HHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHH
Confidence 533 3566678888888888888887765 4444443332 22222233444554555555677777777777888
Q ss_pred hhhcccCCch-hhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHhhh
Q 014628 321 VCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIF 387 (421)
Q Consensus 321 ~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (421)
..++..|++. +|++.++.+...+. +..++..+.+.+ +..| .+..+.+.....+......+.+++
T Consensus 317 ~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 317 LLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred HHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 8877655544 79999999866666 878888787755 4444 556666666655555555555543
No 47
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.9e-30 Score=229.55 Aligned_cols=321 Identities=13% Similarity=0.031 Sum_probs=237.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh-----hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+++.++.++.|++.||+|.|+++.++.+++++.++..+++ ++++.+++.|++.|++ +..++.....+++|+|++
T Consensus 81 l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~ 159 (462)
T PRK15034 81 VSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKA 159 (462)
T ss_pred HHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHh
Confidence 4567788999999999999999999999999999999987 8999999999999998 668889999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhh-----h-------------cchhHHHHHHHHHHHHHHHHHHHhccccccccc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVG-----S-------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 138 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~-----~-------------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 138 (421)
+||+++|+.....++|..+++++...+. + ..+||.+.++..++.++..++.+++.++.+.
T Consensus 160 ~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~~~~~-- 237 (462)
T PRK15034 160 KQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMNDIAS-- 237 (462)
T ss_pred HhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCccc--
Confidence 9999999998777777776666554432 1 3458888888888877777777766433110
Q ss_pred CCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHH
Q 014628 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (421)
++. . .++....+|+|..|.+.+.+++.+.
T Consensus 238 ----~~~-~----------------------------------------------~~~~~~vlk~~~~Wllslly~~tFG 266 (462)
T PRK15034 238 ----SRA-S----------------------------------------------IADQLPVLQRLHLWLLSLLYLATFG 266 (462)
T ss_pred ----ccc-C----------------------------------------------HHHHHHHhCCCchhHHHHHHHHHHH
Confidence 000 0 1345568899999999999988888
Q ss_pred HHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHH-HHhh---
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-AFCL--- 294 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--- 294 (421)
.+.++..++|.|.++.+.... ......+..+...+.++++|+++||+|++ +.+..+.....+.... ....
T Consensus 267 ~fvg~s~~lp~~~~~~~~~~~-~l~~~~l~~l~~~l~rplgG~LADRiG~~-----~vl~~~~i~~~i~~~~~~l~lp~~ 340 (462)
T PRK15034 267 SFIGFSAGFAMLAKTQFPDVN-ILRLAFFGPFIGAIARSVGGAISDKFGGV-----RVTLINFIFMAIFSALLFLTLPGT 340 (462)
T ss_pred HHHHHHHHHHHHHHHHcChHH-HHHHHHHHHHHHHHHHHhhHHHHHhcCch-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 898999999999988663221 11223344577788899999999999998 6555554433333221 1111
Q ss_pred --hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCC---------------------chhhHHHHHHHHHHHhhcccCcc
Q 014628 295 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP---------------------SLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 295 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
.+.+...+.+....++.+..+...+-.+.+.+|+ ++.|.+.|+.. ..+.+|+.+-|
T Consensus 341 ~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~-a~G~~Ggf~~p 419 (462)
T PRK15034 341 GSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFIS-AIGAVGGFFIP 419 (462)
T ss_pred cccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHH-HHHHcccchhh
Confidence 2344445555555566667777777777777763 15678888885 44445888889
Q ss_pred hhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 352 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 352 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+.|...+..|++...++.+.+..+++.++..
T Consensus 420 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 420 QAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred HHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888888777666665443
No 48
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=2.5e-30 Score=235.45 Aligned_cols=304 Identities=16% Similarity=0.172 Sum_probs=227.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 51 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (385)
T TIGR00710 51 LGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRI 130 (385)
T ss_pred HHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..++..||.++.. +++..
T Consensus 131 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------------- 192 (385)
T TIGR00710 131 YSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE----ARIQI-------------- 192 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc----ccCCH--------------
Confidence 999999999999999999999999899999999998887777666666555532110 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
++..+.+++.+++|.++...+..............+.|.++++..+.++..
T Consensus 193 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 243 (385)
T TIGR00710 193 -----------------------------STYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSV 243 (385)
T ss_pred -----------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHH
Confidence 001134556678888887777666666667777888899988888877655
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHhcc
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQ 315 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 315 (421)
. .+.....++.+++.++.+++.||+++| +.+................. ...........+.+++.+...
T Consensus 244 ~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 318 (385)
T TIGR00710 244 FGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMIS 318 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 4 334566788899999999999999987 44443333333222222211 122233334455566666666
Q ss_pred CchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 316 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+.......+..| +.++++.++.+......|.+.+| +.+.+.+
T Consensus 319 ~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~ 360 (385)
T TIGR00710 319 SIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGY-LVSLIHG 360 (385)
T ss_pred HHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHH-HHHhccc
Confidence 666777777765 67899999998777775666655 4554444
No 49
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.6e-31 Score=233.56 Aligned_cols=378 Identities=14% Similarity=0.127 Sum_probs=250.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+|.++|+...|.++||+|||..+.++.++..++.++..++ +++..++++|++.|+..|......+.++.|..|++.|
T Consensus 71 iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~~R 150 (485)
T KOG0569|consen 71 IGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYLTEISPKNLR 150 (485)
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhhhc
Confidence 6889999999999999999999999999988888877654 6889999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHH--hhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~--~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|..-.+.+.+..+|.+++..++. .+.+...|++.+....+++++..+...+ .||+|++.-.+ +++..+.++..+..
T Consensus 151 G~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~-~PESPk~Ll~~-k~~~~~A~~sl~~y 228 (485)
T KOG0569|consen 151 GALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPF-LPESPKYLLIK-KGDEEEARKALKFY 228 (485)
T ss_pred cHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhc-CCCCcchHHHH-cCCHHHHHHHHHHH
Confidence 99999999999999999977763 3335557999999999887776665554 58998875332 22222233333333
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHH-----HHHHHHHHHHHHHHHHhhHHH
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-----LGYIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 231 (421)
+..++.++..+...++.++++.+++. ..+++++++++..+.-. +.......+.+....|...++
T Consensus 229 ~G~~~~~~~~e~~~~e~~~~~~~~~~-----------~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~ 297 (485)
T KOG0569|consen 229 RGKEDVEAEIEEMLREIEEEELEKKK-----------QISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIF 297 (485)
T ss_pred hCCCcchhHHHHHHHHHHHhcccccc-----------CCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHH
Confidence 33333222222222222111111100 12355555554444322 212222233555666666666
Q ss_pred HHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh----hhh--H---HHH
Q 014628 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL--Y---GFL 301 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~---~~~ 301 (421)
++.+ .+.... ......+....+.++++.++.||.||| ++++.+..++.+..+++... +.. | ..+
T Consensus 298 ~~aG-~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i 371 (485)
T KOG0569|consen 298 KTAG-FTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCI 371 (485)
T ss_pred HHcC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHH
Confidence 6644 554433 445667788899999999999999999 77776666655554443321 111 1 123
Q ss_pred HHHHHHHHHHHhccCch-hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 302 ALFTVGELLVFATQAPV-NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
+..++..+..+...++. +.+.+|.+|++.|+.+++......+. ..++-...+..+.+..|.+ .|+.+.+. +...
T Consensus 372 ~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~~--~filF~i~--~~~~ 446 (485)
T KOG0569|consen 372 AAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGPY--VFILFVIP--LAIF 446 (485)
T ss_pred HHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcch--hhHHHHHH--HHHH
Confidence 34444445555554444 66677888889999999999777776 6666677888889988853 34444333 3333
Q ss_pred HHHHhhhhcc-ccccccccccccc
Q 014628 381 IWFVGIFLKS-IDKFNEDGENQIS 403 (421)
Q Consensus 381 ~~~~~~~~~~-~~~~~~~~~~~~~ 403 (421)
..+.++++|| |+|+.+|..++.+
T Consensus 447 ~i~~~~~lPETkgr~~~eI~~~~~ 470 (485)
T KOG0569|consen 447 LIYLYRYLPETKGRTPYEIIEELE 470 (485)
T ss_pred HHHHHHhCcccCCCCHHHHHHHHH
Confidence 3444557787 7787776655544
No 50
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=2.7e-30 Score=240.97 Aligned_cols=343 Identities=13% Similarity=0.094 Sum_probs=236.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.+++|+++||+|||++++.+.++.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 56 ~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (471)
T PRK10504 56 LTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAA 135 (471)
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhc------cc-
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV------SE- 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~------~~- 154 (421)
+++.....++|..+||.+++.+.++.|||+.|++......+..++.....|+.... +++.+....... ..
T Consensus 136 ~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~---~~r~~~~~~~~~~~~~~~~~~ 212 (471)
T PRK10504 136 MTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQ---TRRFDLSGFLLLAVGMATLTL 212 (471)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcccc---CCCCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998877766666655554543211 111110000000 00
Q ss_pred ccccccCCcccccccchh--------hhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Q 014628 155 GSEASNLNDHVSEDISDQ--------ASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYW 226 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (421)
..+..+............ .....+++.. ++...+. ++++||.++......++..........+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~l~~~~~~~~~l~~~~~~~~~~~~~~~~ 283 (471)
T PRK10504 213 ALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNN--------NRALFSL-KLFRTRTFSLGLAGSFAGRIGSGMLPFM 283 (471)
T ss_pred HHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcC--------CCCccCH-HHhcccchHHHHHHHHHHHHHHHHHHHH
Confidence 000000000000000000 0000000000 0001122 3678898888887777777777777778
Q ss_pred hhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh---hhhHHHHH
Q 014628 227 GPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLA 302 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ 302 (421)
.|.|++...+.++....+ .....++.+++.++.+++.||+++| +.+..+..+..+........ ++.+....
T Consensus 284 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (471)
T PRK10504 284 TPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVATTLGLALVSLLFMLVALLGWYYLLPF 358 (471)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHhccccccHHHHHH
Confidence 899988777777654433 3445566677778899999999988 66665555444443333322 22222233
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
...+.+.+.+...+.......+.+|++.++.++++.+..... |..+|+.+.|.+.+..|
T Consensus 359 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~ll~~~g 417 (471)
T PRK10504 359 VLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTIAGLLLGLFG 417 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHHHHHHHHHhh
Confidence 344555666667777788888899999999999999766666 98999999999988765
No 51
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=5.6e-30 Score=233.18 Aligned_cols=301 Identities=15% Similarity=0.074 Sum_probs=209.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 49 ~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~ 128 (392)
T PRK10473 49 AGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKV 128 (392)
T ss_pred HHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.++..||+++.. ++.+..
T Consensus 129 ~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~---~~~~~~-------------- 191 (392)
T PRK10473 129 LSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR---APAASS-------------- 191 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc---cCCccc--------------
Confidence 999999999999999999999888889999999999887777776666666532110 000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..+..++.++++.++...+...+.......+..+.|.+.++..+.++..
T Consensus 192 -------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 240 (392)
T PRK10473 192 -------------------------------KPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGE 240 (392)
T ss_pred -------------------------------hHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHH
Confidence 0012234456666665444444444444455667788888777877654
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.+++.||+++| +.+..+..+.....+.....++.........+...+.+...+..
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~-- 313 (392)
T PRK10473 241 YAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVA-- 313 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH--
Confidence 4 334566778889999999999999988 66555555444444443333333333333333333333333222
Q ss_pred hhhcccCCchh-hHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 321 VCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 321 ~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
...+..|.++| +.+.++. . ++..+++.+.+++.+..|
T Consensus 314 ~~~~~~~~~~~~g~~~~~~----~-~~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 314 MSQALGPFSLRAGVASSTL----G-IAQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHhccCcccccHHHHHH----H-HHHHHHHHHHHHHHHHhc
Confidence 22333344333 3333333 2 255566778888888776
No 52
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.98 E-value=3.4e-31 Score=248.39 Aligned_cols=342 Identities=14% Similarity=0.142 Sum_probs=245.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.++.|+++||+|||++++.+.++..++.+++++++|++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 48 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 127 (485)
T TIGR00711 48 LANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRA 127 (485)
T ss_pred HHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHH
Confidence 46678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhh-------hccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSE 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~ 154 (421)
++++..+..+|..+||.+++.+.++++||+.|++.++++++..++.++..|++++.. .++.+..... ....
T Consensus 128 ~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~ 205 (485)
T TIGR00711 128 MAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLY 205 (485)
T ss_pred HHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999998887777776666666532211 1111110000 0000
Q ss_pred ccccccCCcccccccchhh---------hhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014628 155 GSEASNLNDHVSEDISDQA---------SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
.....+..+...+...... .....+.+. ++...+ .+++++|.++...+..++.....+....
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (485)
T TIGR00711 206 GLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTD--------DNPLVD-LRLFKYRNFTIGCVYMSLLGLGLYGSFY 276 (485)
T ss_pred HHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcC--------CCCccC-HHHHcCCChHHHHHHHHHHHHHHHHHHH
Confidence 0000000000000000000 000000000 000111 2467888888888777788888888889
Q ss_pred HhhHHHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--h--hhhHHH
Q 014628 226 WGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--L--SSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~ 300 (421)
+.|.|+++..+.++.... ......++.+++.++.|++.||+++| +.+..+..+.......... . .+.+..
T Consensus 277 ~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 351 (485)
T TIGR00711 277 LLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAI 351 (485)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHH
Confidence 999999998888865553 34556788899999999999999988 6665555555544444331 1 233444
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
.....+.+++.+...++......+.+|+++++++.|+.+..... |+.+|+.+.+.+.++
T Consensus 352 ~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~~~~~ 410 (485)
T TIGR00711 352 ALPQFIRGFGMGCFFMPLTTIALSGLPPHKIARGSSLSNFTRQL-GGSIGTALITTILTN 410 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 45566677777777777777788889999999999999766665 889999999988875
No 53
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.98 E-value=1.3e-29 Score=230.90 Aligned_cols=327 Identities=13% Similarity=0.159 Sum_probs=225.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh---h-hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
+++.+++++.|+++||+||||++..+.++++++++++. + .++++.+++.|+++|++.+...+...+.+.+++|+++
T Consensus 59 ~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~ 138 (402)
T TIGR00897 59 IAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDN 138 (402)
T ss_pred HHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHH
Confidence 46778999999999999999999999999998877653 3 3578888999999999998888888888999999999
Q ss_pred chhHHHHHHHHHHHHh-hhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccc
Q 014628 78 KTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGS 156 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~-~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (421)
|++++|+.+.+.++|. +++|.+++.+.+..||+..++......++..++.+++.++.++ +++.++.
T Consensus 139 ~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--------- 205 (402)
T TIGR00897 139 LSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDIFT----PQHMQTR--------- 205 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCCCC----cccccCC---------
Confidence 9999999999999997 6899999999888887666555444333333333333333110 0000000
Q ss_pred ccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC
Q 014628 157 EASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
+ +.++..+.++.++++|.++...+..++.....++..++.|.|.++ .+
T Consensus 206 ----------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g 253 (402)
T TIGR00897 206 ----------E---------------------KFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LG 253 (402)
T ss_pred ----------c---------------------chhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cC
Confidence 0 000111235567889999888777777777788888999999866 67
Q ss_pred Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHH-HHHHHHHHHH-HHHH----hhhhhHHHHHHHHHHHH
Q 014628 237 MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISC-LTAF----CLSSLYGFLALFTVGEL 309 (421)
Q Consensus 237 ~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~----~~~~~~~~~~~~~~~~~ 309 (421)
.+..+. .......++..++.+..|+++||++|| +... ...+...+.. .+.. ..++.+...+..++.+.
T Consensus 254 ~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~ 328 (402)
T TIGR00897 254 FSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWM-----NTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGI 328 (402)
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHH
Confidence 765444 334566788899999999999999987 3322 1111111111 1111 11233444444555555
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
+.+... +......+ .++++|+++.|+.+...+. |..++|.+.|.+.|..| +...+++.+++.+++.+..
T Consensus 329 ~~~~~~-~~~~~~~~-~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~~~~~~a~~~~i~~~~~ 397 (402)
T TIGR00897 329 FLAGYV-PLAAVFPT-LAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIGVVWIFAALYVVSAFLT 397 (402)
T ss_pred HHHHHH-HHHHHHHh-hCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHHHHHHHHHHHHHHHHHH
Confidence 555433 34444444 5667999999999877766 88899999999999877 5566666666555544443
No 54
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.98 E-value=7.1e-30 Score=218.11 Aligned_cols=322 Identities=15% Similarity=0.109 Sum_probs=255.4
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHH---HHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW---SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.-++.|.+.||+|.|++..+++++..+-.+..+++.+.+ ++++++++.|++.+ .+.+...++++|+|||++|.+
T Consensus 63 allRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~~Ga-sFav~m~~~s~~fP~~~qG~A 141 (417)
T COG2223 63 ALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGLAGA-SFAVGMPNASFFFPKEKQGLA 141 (417)
T ss_pred HHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhcccc-eehcccccccccCChhhhhHH
Confidence 45668899999999999999999999999999999986555 99999999999887 677899999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcch---hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+|++. ..|+|..+...++..+....+ ||....+..+..++..++.++...+.+..+...++...
T Consensus 142 lGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~d~p~~r~~~~~~~~------------ 208 (417)
T COG2223 142 LGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMNDVPEHRASVKPQLP------------ 208 (417)
T ss_pred HHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhhccccccch------------
Confidence 99999 999999999999999988888 99999999988888888888776443322111111000
Q ss_pred ccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
..++.++++++.|.+.+.++.....+.++..++|.|++++++.+
T Consensus 209 ------------------------------------~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~ 252 (417)
T COG2223 209 ------------------------------------AQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLS 252 (417)
T ss_pred ------------------------------------hHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 23667788999999999999999999999999999999999999
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHH-Hhh------hhhHHHHHHHHHHHHH
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA-FCL------SSLYGFLALFTVGELL 310 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~ 310 (421)
+... .+.....+.+.+.++++|+++||+|.+ +........+.+..... ... .+.......+.....+
T Consensus 253 ~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~ 327 (417)
T COG2223 253 PVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVF 327 (417)
T ss_pred hhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHH
Confidence 7665 555666778888999999999999988 55544444444433333 322 3445555556667777
Q ss_pred HHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+......+..+...+| ++.|.+.|+.. ..+.+|+..-|...|...+..|++...|+++..+.+++.+...
T Consensus 328 ~G~GnGsvfk~Ip~if~-~~~G~v~G~vg-a~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~ 398 (417)
T COG2223 328 AGLGNGSVFKMIPVIFP-KETGAVTGIVG-AIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTW 398 (417)
T ss_pred hccCcchheeechHHHH-hhhhHHHHHHH-HhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 77888888888777664 47888999995 4444588888999999999999888888888777666655443
No 55
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.98 E-value=3.7e-30 Score=241.82 Aligned_cols=349 Identities=11% Similarity=0.102 Sum_probs=217.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|++.+...+....++.|++|+++|+++
T Consensus 66 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~ 145 (496)
T PRK03893 66 ISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKA 145 (496)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 46778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..++|.+++.+.++++||+.|++..+..+ ..++.....||..+..+++++.+..
T Consensus 146 ~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~-------------- 210 (496)
T PRK03893 146 SGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPEAEDWKEKHAGKAPV-------------- 210 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCCchhhhhhccccccc--------------
Confidence 9999999999999999999999999999999987544332 2222222224422110000000000
Q ss_pred Ccccccccchhhhhhhccccc-------hhhhhhhhhhhh-------------hhh-H--HhhcchhHHHHHHHHHHHHH
Q 014628 162 NDHVSEDISDQASERSIKSIG-------ESRFLNQLSQFS-------------QDT-K--VLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~-------------~~~-~--~~~~~~~~~~~~~~~~~~~~ 218 (421)
++..+............... ...........+ ... . ...+.+.........+....
T Consensus 211 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (496)
T PRK03893 211 -RTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVMLMVVVLFAFL 289 (496)
T ss_pred -hhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHh
Confidence 00000000000000000000 000000000000 000 0 00011111111111111111
Q ss_pred HHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh--h
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S 295 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 295 (421)
.......++|.|+++..+.+..+. .+.....++.+++.++.|++.||+++| +.+..+..+..+..+..... .
T Consensus 290 ~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 364 (496)
T PRK03893 290 YSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR-----KAYVCSLLISQLLIIPVFAIGGA 364 (496)
T ss_pred ccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHhhcccc
Confidence 122355788999987777776554 444667788899999999999999988 55555444444333322222 2
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHH
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 373 (421)
+.+.......+.+.......+....++.+.+|++.|++++|+.+..... |..++|.+.|.+.|..| +...+...+.
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~lgp~l~g~l~~~~g-~~~~~~~~~~ 440 (496)
T PRK03893 365 NVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-GGALAPILGALIAQRLD-LGTALASLSF 440 (496)
T ss_pred HHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-HHHHHHHHHHHHhccCC-hHHHHHHHHH
Confidence 2222222222223333334455667788999999999999999766665 88899999999999876 5555544443
No 56
>TIGR00895 2A0115 benzoate transport.
Probab=99.97 E-value=1.9e-30 Score=237.36 Aligned_cols=334 Identities=16% Similarity=0.197 Sum_probs=229.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+++..+.++..++.++..++++++.+++.|++.|++.+...+...+++.|++|+++|+++
T Consensus 63 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~ 142 (398)
T TIGR00895 63 IGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTA 142 (398)
T ss_pred HHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++...+..+|..+++.+++.+.+..+||+.|++.+++.++..++.+...||+++...++++++.. +..++......
T Consensus 143 ~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 219 (398)
T TIGR00895 143 VGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFLVSKRPETVR---RIVNAIAPQMQ 219 (398)
T ss_pred HhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHHHhcCHHHHH---HHHHHHHHhcc
Confidence 999999999999999999999999999999999987776666666666667654321111000000 00000000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++ ++... ++..+. +..++..+..+...+.+..+...+..++..........+.|.+. +..+.++..
T Consensus 220 ~~~-~~~~~----~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~ 286 (398)
T TIGR00895 220 AEA-QSALP----EQKATQ-------GTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKLM-VELGFSLSL 286 (398)
T ss_pred ccc-ccccc----cccccc-------chhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHcCCCHHH
Confidence 000 00000 000000 00011111111111223334444444555566667778888544 445666443
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .......++.+++.++.+++.||+++| ..............++.....+.+......++.+++.+...+....
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 361 (398)
T TIGR00895 287 AATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQSGLYA 361 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3 445667788899999999999999986 4443333333333333332345555566667777888888888899
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
...+.+|+++|+++.|+.+...+. |..++|.+.|++
T Consensus 362 ~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 362 LMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence 999999999999999999766665 888999888865
No 57
>PRK12382 putative transporter; Provisional
Probab=99.97 E-value=1.2e-29 Score=230.99 Aligned_cols=317 Identities=15% Similarity=0.084 Sum_probs=218.1
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh--------hhhhHHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--------SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.++++++|+++||+||||++..+.+...++.+... ..++++.+++.|+++|++.+...+...+++.|++
T Consensus 62 ~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~ 141 (392)
T PRK12382 62 LATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGALTWGLGLV 141 (392)
T ss_pred HHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 46678899999999999999999999888776654322 2368899999999999999998998999999999
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
|+|+|++++++.+.+...|..+||++++.+.+..|||+.+.+..+..++... ..++.++. +++++++
T Consensus 142 ~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~------- 208 (392)
T PRK12382 142 GPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWA----FNGTVRKV--PAHAGER------- 208 (392)
T ss_pred CccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHH----HHHhccCC--CCCcccC-------
Confidence 9999999999999999999999999999999989999887766543322221 11211100 0000000
Q ss_pred cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
.+. .+..+.+. .+. +...+..........+.|.|+++
T Consensus 209 ----------------------------------~~~---~~~~~~~~-~~~-----~~~~l~~~~~~~~~~~~~~~~~~ 245 (392)
T PRK12382 209 ----------------------------------PSL---WSVVGLIW-KPG-----LGLALQGVGFAVIGTFVSLYFAS 245 (392)
T ss_pred ----------------------------------chH---HHHHHHHH-HhH-----HHHHHHHHHHhHHHHHHHHHHHh
Confidence 000 00111111 111 11222334444556777777766
Q ss_pred hhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHh
Q 014628 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFA 313 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (421)
. +.+... .......++.+++.+..+++.||+++| +.+.....+...........++.+...+...+.+++.+.
T Consensus 246 ~-~~~~~~-~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 318 (392)
T PRK12382 246 K-GWAMAG-FTLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSL 318 (392)
T ss_pred c-CCchhH-HHHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHh
Confidence 3 343322 223445566788899999999999987 555544444444444444445555555556666666666
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+.......+..|+++|+++.|+.+...+. |..++|.+.|++.|..| |+..+.+.+.+.+++.+..+
T Consensus 319 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (392)
T PRK12382 319 IFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVFLAGAISAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHH
Confidence 6666777788889999999999999766665 88999999999999876 77888877766655554443
No 58
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.97 E-value=3.2e-29 Score=227.31 Aligned_cols=302 Identities=16% Similarity=0.180 Sum_probs=217.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+...+...+++.|++|+++|+++
T Consensus 37 ~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (377)
T PRK11102 37 LGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFSRM 116 (377)
T ss_pred HHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++..+..||.++.. ++++.
T Consensus 117 ~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--------------- 178 (377)
T PRK11102 117 MSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE---RRQPF--------------- 178 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc---ccCCC---------------
Confidence 999999999999999999999999899999999998887777666665556532110 00000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+.++..+++++.+++|.++...+...+.......+..+.|.++.+..+.++..
T Consensus 179 ---------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~ 231 (377)
T PRK11102 179 ---------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQN 231 (377)
T ss_pred ---------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHH
Confidence 00001234556677888777666666656666677777888888877877655
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHH---HHHHHh-hhhhHHHHHHHHHHHHHHHhccC
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS---CLTAFC-LSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
. .......+..+++.++.+++.||+++| +.+..+..+.... ...... ..+.+...+...+.....+....
T Consensus 232 ~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (377)
T PRK11102 232 FGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMISS 306 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhH
Confidence 4 344666788889999999999999988 5554444332221 111111 11223333333333333333444
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 354 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 354 (421)
.......+.. ++.++++.++.+.....+|..+++.+.
T Consensus 307 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 307 NAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred HHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455556655 488999999987665555666666443
No 59
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.97 E-value=3.6e-29 Score=226.66 Aligned_cols=312 Identities=17% Similarity=0.188 Sum_probs=214.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|+++|++.+...+.....+.+..++++|+++
T Consensus 52 l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (381)
T PRK03633 52 TGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRL 131 (381)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999999888888888899999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
++.+..+.++|..+||.+++.+.+...|...+. .+........+.+...++. . +++ ++
T Consensus 132 ~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~---~~~-~~--------------- 189 (381)
T PRK03633 132 LAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ--Q---AEN-HD--------------- 189 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC--C---CCC-CC---------------
Confidence 999999999999999999999877543333332 2221111111111111110 0 000 00
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
.++.++.+++|.++......+...........++|.|.++. +.++..
T Consensus 190 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~-g~s~~~ 236 (381)
T PRK03633 190 --------------------------------STSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNHQ-GMSDAS 236 (381)
T ss_pred --------------------------------CCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-CCCHHH
Confidence 01123345666666544434444445556667889988774 555433
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
. .+.....++.+++.+..+++.||+++| +.+..+............ ... .......+.+.+.....+....
T Consensus 237 ~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~~-~~~~~~~l~g~~~~~~~p~~~~ 308 (381)
T PRK03633 237 IGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQVFVVILGSIAML--SQA-AMAPALFILGAAGFTLYPVAMA 308 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hhH-HHHHHHHHHHHHHHhHHHHHHH
Confidence 3 344566678899999999999999988 555544444444333222 111 1222333444444455677777
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
...+..|+++++.+.+..+...+. |..++|.+.|++.|+.+ +...|.+.+.+.++.
T Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 309 WACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIY 364 (381)
T ss_pred HHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHH
Confidence 788888888878777877655455 99999999999999876 556666655554433
No 60
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.97 E-value=1.3e-28 Score=228.65 Aligned_cols=325 Identities=14% Similarity=0.113 Sum_probs=228.4
Q ss_pred chhhHHHHhhhhc-----CCchH-HHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 6 VASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 i~~~~~g~l~Dr~-----Grr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
++.+++|+++||+ ||||. +..+.+..+++..++++. ++++.+.+.+++.|++.+...+...+++.|++|++
T Consensus 60 ~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~ 139 (491)
T PRK11010 60 VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAE 139 (491)
T ss_pred HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5788999999999 99985 667777777777777665 47888999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhh-cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+|+++.++...+..+|.++++.++..+.+ ..|||..|++.+++.++..+..++ .||+++.. ++++..
T Consensus 140 ~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~---~~~~~~-------- 207 (491)
T PRK11010 140 ERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTI---PVPKTL-------- 207 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccc---ccccch--------
Confidence 99999999999999999999999999988 579999999999877666555443 45532110 000000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
. +...++++++++++..+...+..++..........+.+.|+.+..
T Consensus 208 ------------------~----------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~ 253 (491)
T PRK11010 208 ------------------E----------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGV 253 (491)
T ss_pred ------------------h----------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 0 000123555666776666655555555666666677888887777
Q ss_pred CCccchhHHH--hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH---HHHHhh-hhhHHHHHHHHHHHH
Q 014628 236 HMSNADMMFG--GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC---LTAFCL-SSLYGFLALFTVGEL 309 (421)
Q Consensus 236 ~~~~~~~~~~--~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~ 309 (421)
+.+..+.... ....++.+++.+++|+++||+++| +.+.....+..+.. ...... ++.+......++..+
T Consensus 254 G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~ 328 (491)
T PRK11010 254 GFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENL 328 (491)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 8876555433 344578899999999999999987 44433333222211 111122 233333333344333
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+.+...+.......+..+++.+++..++.+..... |..+++.+.|++.|..| |...|.+...+.+.+.+...
T Consensus 329 ~~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~ 400 (491)
T PRK11010 329 CGGMGTAAFVALLMTLCNKSFSATQFALLSALSAV-GRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLL 400 (491)
T ss_pred HHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHH
Confidence 44444455677788888888999999999777665 77777889999999876 77777777666666554444
No 61
>PRK10133 L-fucose transporter; Provisional
Probab=99.97 E-value=1.1e-28 Score=226.06 Aligned_cols=316 Identities=15% Similarity=0.166 Sum_probs=225.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhh---hhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+++.+++++.|++.||+|||+++..+.++++++.+++ .++++++.++++|+++|+|.+...+....++.|+.++++|
T Consensus 72 ~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~ 151 (438)
T PRK10133 72 FGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSG 151 (438)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhH
Confidence 5788999999999999999999999999999999885 5688999999999999999999999999999998777777
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhh------------------c--------chhHHHHHHHHHHHHHHHHHH-Hhcc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGS------------------H--------LNWRYAFWGEAILMLPFAVLA-FVIK 131 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~------------------~--------~~wr~~f~~~~~~~~~~~~~~-~~~~ 131 (421)
.+.+++.+....+|..+++.+++.+.. . .+||++|+....+..+..++. +...
T Consensus 152 ~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~~w~~~f~~~~~v~~~~~~~~~~~~~ 231 (438)
T PRK10133 152 HFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVLSVQTPYMIIVAIVLLVALLIMLTKF 231 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 778999999999999999998875430 0 256777765443322222222 2222
Q ss_pred cccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHH
Q 014628 132 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 211 (421)
Q Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (421)
||.+. ++++.. +..+..++.++++++|.++...+
T Consensus 232 p~~~~-----~~~~~~-----------------------------------------~~~~~~~~~~~ll~~~~~~~~~l 265 (438)
T PRK10133 232 PALQS-----DNHSDA-----------------------------------------KQGSFSASLSRLARIRHWRWAVL 265 (438)
T ss_pred CCCCc-----cccccc-----------------------------------------cccchhhhHHHHHhCchHHHHHH
Confidence 33110 000000 00001123456778888887776
Q ss_pred HHHHHHHHHHHHHHHhhHHH-HHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 014628 212 GYIAYNFVIGAYSYWGPKAG-YNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
..++......+...|.+.|+ ++..+.++.... ......++.++++++++++.||+++| +.+..+..+....++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~ 340 (438)
T PRK10133 266 AQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPH-----KVLAAYALIAMALCL 340 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHH
Confidence 66677777777777888885 566788865553 34667788899999999999999998 666555555444444
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhH
Q 014628 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 369 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 369 (421)
.....++. ..+..+.+.+++.+..+|..++...+..++ +.+.+.++.. ... .|+.++|.+.|.+.|..|+.+..++
T Consensus 341 ~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~-~g~~~~~~i~G~l~~~~g~~~~~~~ 416 (438)
T PRK10133 341 ISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTI-IGGGIVTPVMGFVSDAAGNIPTAEL 416 (438)
T ss_pred HHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHh-ccchHHHHHHHHHHHhccchHHHHH
Confidence 43333332 234556778889999999999999988755 4677888874 333 4778889999999997664445555
Q ss_pred HHH
Q 014628 370 ALT 372 (421)
Q Consensus 370 ~~~ 372 (421)
+..
T Consensus 417 v~~ 419 (438)
T PRK10133 417 IPA 419 (438)
T ss_pred HHH
Confidence 433
No 62
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.97 E-value=6.9e-29 Score=223.09 Aligned_cols=302 Identities=21% Similarity=0.309 Sum_probs=252.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|+++||+|||+.+..+.++..++.+...++++++.+++.|++.|++.+...+...+++.|++|+|+|++.
T Consensus 45 ~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (352)
T cd06174 45 LGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERGRA 124 (352)
T ss_pred HHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchhhh
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.+....+|..++|.+++.+.+..+||+.+++.+++.++..+...+. |
T Consensus 125 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----------------------------- 174 (352)
T cd06174 125 LGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFL-L----------------------------- 174 (352)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH-H-----------------------------
Confidence 9999999999999999999999999899999999988776665554332 1
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
|.++...+..++..........+.|.+.++..+.+...
T Consensus 175 ------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (352)
T cd06174 175 ------------------------------------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAE 212 (352)
T ss_pred ------------------------------------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHH
Confidence 33445556667777778888889999998876766544
Q ss_pred h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhH-HHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchh
Q 014628 242 M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 242 ~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
. .......++..++.++.+++.||+++| + .+..+..+..+........++.+...+...+.+.+.+...+...
T Consensus 213 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 287 (352)
T cd06174 213 AGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALL 287 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHH
Confidence 4 445677788999999999999999998 6 66666666666666666566666677777888888888889999
Q ss_pred hhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
....+..|+++|++..|+.+...+. +..++|.+.+.+.|..+ +...+.+.+.+.+++.+..
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i~~i~~ 348 (352)
T cd06174 288 TLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLILAALALLAALLL 348 (352)
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHHHHHHHHHHHHHh
Confidence 9999999999999999999766666 88999999999998655 6677777776665555443
No 63
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=99.97 E-value=2.4e-29 Score=230.12 Aligned_cols=372 Identities=14% Similarity=0.120 Sum_probs=274.9
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHH-HHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
.+..|+.+.+.||+|.|.+.+.|.++.+++.++.++++++|++++ .-++.|+|.|..+.....++..||++| |+.+.|
T Consensus 95 ~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~G 173 (509)
T KOG2504|consen 95 LLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAVVILGTYFEKK-RALATG 173 (509)
T ss_pred HHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchhhhhhhHhHHH-HHHHHh
Confidence 456889999999999999999999999999999999999999887 678899999999999999999888765 999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC--
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL-- 161 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 161 (421)
+...+.++|.++-|.+...+.+.+|||+.+++.+.+.+-..+......|...+..++ +.++... .....+....
T Consensus 174 ia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~~~~~~~~-~~~~~~~---~~~~~~~~~~~~ 249 (509)
T KOG2504|consen 174 IAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPLSPPKKPN-EEKDLRN---SAASVESTPKPV 249 (509)
T ss_pred hhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCCCcCCCch-hhhhhcc---cccccccccccc
Confidence 999999999999999999999999999999999999887777777777754433222 0000000 0000000000
Q ss_pred --C-cccccccch---hhhhhhccccchhhhhhhhhhhh-hhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 014628 162 --N-DHVSEDISD---QASERSIKSIGESRFLNQLSQFS-QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 162 --~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
. .+....... .......+.+.+... ...+... .--.++++++.++...+...+....+.....++|.|..+.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~ll~~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~~ 328 (509)
T KOG2504|consen 250 ELRISERDSGLKKLSLSNLATLKRGPDKWRN-SPLQAFLSMLDLSLLKDPKFLLLALSNLFAYLGFNVPFVYLPSYAKSL 328 (509)
T ss_pred ccccccCCCCCCcccccchhhhhhCCccccc-cchhhhhhhhhHHHHcCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 000000000 000000000000000 0000000 1124678999999999999999999999999999999965
Q ss_pred hCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhc
Q 014628 235 YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFAT 314 (421)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (421)
+..+.......++.++..++++++.|++.|+...++. .....+.+..++..+.....++.+.++....+.+++.+..
T Consensus 329 g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~ 405 (509)
T KOG2504|consen 329 GLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTLLIAGLARLFLPFATTYVGLIVFSILFGFCVGSF 405 (509)
T ss_pred CCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 4444445566688889999999999999999884321 4455666666666666666777777777888888888877
Q ss_pred cCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHhh
Q 014628 315 QAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
......++.+.++.++-+.+.|+...+... +..+||++.|++.|..++|...|++++.+.+++..+++...
T Consensus 406 ~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 406 SSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 777777899999999999999999555555 99999999999999999999999999999988887777655
No 64
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.97 E-value=2.6e-28 Score=221.77 Aligned_cols=320 Identities=9% Similarity=0.065 Sum_probs=208.0
Q ss_pred cccchhhHHHHhhhhcCCchHH-HHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc--h
Q 014628 3 GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--T 79 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r--~ 79 (421)
+++++.+++++ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+...|....++.|+.++++| +
T Consensus 64 ~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (393)
T PRK15011 64 GILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFALAREHADKTGREAV 142 (393)
T ss_pred HHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhhhccchHH
Confidence 34455555555 9999999874 566677678888888999999887766655555556788888888888876655 3
Q ss_pred hHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
...++.+.+.++|.++||++++.+.+++|||..|++.++..++..+..++..||.++.++ ++++..
T Consensus 143 ~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------------ 208 (393)
T PRK15011 143 MFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKELP--LATGTL------------ 208 (393)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCCCc--cccccc------------
Confidence 455788999999999999999999999999999999998887777776666676422110 000000
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+..++ +++..+...............+..+.|.|+++..+.++
T Consensus 209 -----------------------------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~ 251 (393)
T PRK15011 209 -----------------------------------EAPRR--NRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPE 251 (393)
T ss_pred -----------------------------------ccccc--ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCH
Confidence 00000 01111222222233334455566789999988888775
Q ss_pred chh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... .+.....+..+++.++.|+++||+++| +.+..........+......++.+..+....+.+++.+...+..
T Consensus 252 ~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~ 326 (393)
T PRK15011 252 KLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIG 326 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 333444566778899999999999998 54444333333333333333444444444444444444444444
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
..+..+..| +++++++++.+...+. |..++|.+.|.+.|..| +...+.....+.+++.+..
T Consensus 327 ~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~~~~~~~ 387 (393)
T PRK15011 327 MLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFWFALVMIIATLFCL 387 (393)
T ss_pred HHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHH
Confidence 555667665 5699999998776665 88999999999999865 6666666555554444333
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.97 E-value=2.9e-28 Score=221.27 Aligned_cols=314 Identities=15% Similarity=0.136 Sum_probs=232.1
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh---hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+++.+++++.|++.||+|||+++..+.++++++.+++.. .++++.+++.|++.|+|.|...+....++.+..|+++|
T Consensus 49 ~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~ 128 (410)
T TIGR00885 49 GGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTA 128 (410)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHH
Confidence 578899999999999999999999999999999988654 46899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhh--------------------------cchhHHHHHHHHHHHHHHHHHHHhc-c
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGS--------------------------HLNWRYAFWGEAILMLPFAVLAFVI-K 131 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~--------------------------~~~wr~~f~~~~~~~~~~~~~~~~~-~ 131 (421)
++.+++.+...++|..++|.+++.+.. ..+||++|++.+++.++..++..+. .
T Consensus 129 ~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~~~~~ 208 (410)
T TIGR00885 129 TRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIMLTKM 208 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999887742 2469999999988776655444322 1
Q ss_pred cccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHH
Q 014628 132 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 211 (421)
Q Consensus 132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (421)
|+.++ +++++ . +..++.++++++|.++...+
T Consensus 209 p~~~~----~~~~~-~--------------------------------------------~~~~~~~~~~~~~~~~~~~l 239 (410)
T TIGR00885 209 PALNH----SDAKQ-I--------------------------------------------SFSASLSRLARIRHYREGVI 239 (410)
T ss_pred CCCCc----ccccc-c--------------------------------------------cchhhHHHHHhChhHHHHHH
Confidence 22100 00000 0 00012345678888888777
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhh-CCccc-hhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 014628 212 GYIAYNFVIGAYSYWGPKAGYNIY-HMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
..+++........++++.|.++.. +.+.. ...+......+..+|+++++++.||+++| +.+......+.+.++
T Consensus 240 ~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~-----~~l~i~~~~~~~~~l 314 (410)
T TIGR00885 240 AQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAH-----KVLMAYAIIGMALCL 314 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHH-----HHHHHHHHHHHHHHH
Confidence 777777777777888999987643 22221 12234445577789999999999999887 777666666666666
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc-----ccc
Q 014628 290 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-----NNW 364 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-----g~~ 364 (421)
+....++.. ....+.+.+++.+..+|..++...+..+++.+..+.++. +. .+|+.+.|++.|++.|.. |++
T Consensus 315 l~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~-~~--~~Gga~~p~l~G~~~d~~~~~~~~~~ 390 (410)
T TIGR00885 315 GSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLV-MA--IIGGGIVPPLQGFIIDMKEIAAAPAV 390 (410)
T ss_pred HHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHH-HH--HhccchHHHHHHHHHHHhcccccCcc
Confidence 665554433 345666677888888899999999999876654455554 33 258899999999999954 345
Q ss_pred hhhhHHHHH
Q 014628 365 RKTTLALTS 373 (421)
Q Consensus 365 ~~~~~~~~~ 373 (421)
+..|++-..
T Consensus 391 ~~~~~~~~~ 399 (410)
T TIGR00885 391 NTSFILPLL 399 (410)
T ss_pred chHHHHHHH
Confidence 556665433
No 66
>PRK11043 putative transporter; Provisional
Probab=99.97 E-value=3.4e-28 Score=222.14 Aligned_cols=303 Identities=19% Similarity=0.139 Sum_probs=216.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|+++|++.+...+...+++.|++|++++++.
T Consensus 52 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (401)
T PRK11043 52 AGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRV 131 (401)
T ss_pred HHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999988888888999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
.+.......+|..++|.+++.+.++.|||+.|++.+++.++..++.++..|+ +++ ++.+..
T Consensus 132 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~----~~~~~~-------------- 192 (401)
T PRK11043 132 FATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS-KKA----RKQSQD-------------- 192 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC-CCc----cccchH--------------
Confidence 9999999999999999999999999999999999988877766655544322 110 000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..++++++++|.++...+...+....+..+..+.|.+.++ .+.++..
T Consensus 193 --------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~ 239 (401)
T PRK11043 193 --------------------------------ALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPAD 239 (401)
T ss_pred --------------------------------HHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHH
Confidence 1235566677777765555555555566677788888766 5666544
Q ss_pred hHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHHhccCch
Q 014628 242 MMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
..+ .....++.+++.+..+++.||+++++.. +.......++......... .++.+.......+.+++.+..++..
T Consensus 240 ~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (401)
T PRK11043 240 IGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIV 317 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 433 2444567788888899999999876211 1111112222221111111 2233334444555666666666666
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
.....+.. +++++++.|+.+..... ++..++.+.|.+.|.
T Consensus 318 ~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~ 357 (401)
T PRK11043 318 VAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALIST 357 (401)
T ss_pred HHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 66666665 46799999999766555 666778888888774
No 67
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=8.2e-29 Score=254.19 Aligned_cols=323 Identities=13% Similarity=-0.028 Sum_probs=230.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHH---HHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++++++++++|+++||+|||+++.. +.+...+..+.+...++++.++++|+++|++.+...|+..+++.|++++++|
T Consensus 63 l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~ 142 (1140)
T PRK06814 63 LPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDEL 142 (1140)
T ss_pred HHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCcccc
Confidence 4567889999999999999997533 3333333333344458999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
++++++.+++.++|.++||++++++.+..+|++.|...++..++. ++..+..|+...... ..+.+.
T Consensus 143 ~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~------------ 208 (1140)
T PRK06814 143 LGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLG-WLASLFIPKTGNAAP-DLKIDR------------ 208 (1140)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH-HHHHhhCCCCCCCCC-CCeecc------------
Confidence 999999999999999999999999999999999995554444433 333344444321100 000000
Q ss_pred ccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
...++....++.+.+++.++...+..++..+....+..++|.|+++.++.+
T Consensus 209 -----------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~ 259 (1140)
T PRK06814 209 -----------------------------NIIRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGD 259 (1140)
T ss_pred -----------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCc
Confidence 000112245677888999999888888877778888889999999988877
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--------------------hhhh
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--------------------LSSL 297 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~ 297 (421)
.... .+.+...++.+++.++.+++.|+..++ +.+..+.++..+..+.+.. ..+.
T Consensus 260 ~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (1140)
T PRK06814 260 ENVATLFLAVFSVGVAVGSFLASKLSEGRITL-----LYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHG 334 (1140)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCceee-----eeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccccc
Confidence 6544 344677788899999999999877655 2222222222111111111 1444
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 373 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 373 (421)
+..++..++.+++.+...++..+++++..|++.+|+++|+.+..... +..+++.+.+.+.+...++...+++.+.
T Consensus 335 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g~l~~~~~~~~~~~~~~~~ 409 (1140)
T PRK06814 335 WRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILALLQALGFSIPWIILFIAL 409 (1140)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHHHHHHhccCHHHHHHHHHH
Confidence 55556666777777788888899999999999999999999766555 8888998989888654444444444333
No 68
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=6.7e-28 Score=221.78 Aligned_cols=328 Identities=17% Similarity=0.143 Sum_probs=250.2
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh-----hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
...+.++++|.++||++|||+++.+.++..+..+..++. .+.+.+++.-++.|++.+...|...+++.|.+|+++
T Consensus 57 P~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~ 136 (524)
T PF05977_consen 57 PILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKED 136 (524)
T ss_pred HHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhh
Confidence 356788999999999999999999988877665554432 368889999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccc
Q 014628 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
...++++.+...++..++||.++|.+....|-.+.|.+.++..++...+.....++..+. +..++
T Consensus 137 L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~----~~~~e----------- 201 (524)
T PF05977_consen 137 LPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS----SLPRE----------- 201 (524)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc----ccchh-----------
Confidence 999999999999999999999999999989999999999876655544443332221100 00000
Q ss_pred cccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCC
Q 014628 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
...++..+.++.+.++|.+....+..++.++....+...+|.+.++..+.
T Consensus 202 ------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~ 251 (524)
T PF05977_consen 202 ------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGG 251 (524)
T ss_pred ------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCC
Confidence 11223345666777778777766656666666666677789999888887
Q ss_pred ccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 238 SNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 238 ~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
++.... +.+..+++.++|.++.+++.+|++++ +.+..+.+..+...+.+...++.+...+.+++.|++......
T Consensus 252 ~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~ 326 (524)
T PF05977_consen 252 GASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANS 326 (524)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHH
Confidence 765553 34677788888888888888877766 666666666666666667777888777788888888888888
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
...+..++..|++.||++++++++.... +..+|..+.|.+.+..| ....+.+.++..+++.++.
T Consensus 327 ~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 327 SLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHH
Confidence 8889999999999999999999766666 88889999999999877 4455555554444444433
No 69
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.97 E-value=5.3e-28 Score=220.34 Aligned_cols=303 Identities=13% Similarity=0.060 Sum_probs=218.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.++++++|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|++.+...+....+..|.+++++++++
T Consensus 54 ~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (394)
T PRK11652 54 LTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHA 133 (394)
T ss_pred HHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHH
Confidence 46788999999999999999999999999999999999999999999999999999998888888899999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
++....+..+|..++|.+++.+.+..|||+.|++.++..++..++..+..||+++.. ++..
T Consensus 134 ~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-------------- 194 (394)
T PRK11652 134 NSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPAD-----ARRT-------------- 194 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCccc-----cchh--------------
Confidence 999999999999999999999999889999999998877666655555556532110 0000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
+..++++..+++|.++...+..+........+..+.+.++++..+.++..
T Consensus 195 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 244 (394)
T PRK11652 195 ------------------------------RVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMT 244 (394)
T ss_pred ------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHH
Confidence 01134556677887776655555555555555667788888877777544
Q ss_pred hH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHH-HHHHHHHHHHHHHHh--hhhhHHHHHHHHHHHHHHHhccCc
Q 014628 242 MM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 242 ~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
.. +.....++.+++.++.+++.||.+++ .... ............... ..+.+.......+.+++.+...+.
T Consensus 245 ~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 319 (394)
T PRK11652 245 VSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPL 319 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHH
Confidence 32 23444566667777777777777632 2221 222222222221111 123344455556667777777788
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
......+..| ++++++.++.+..... |..+++.+.+.+.+.
T Consensus 320 ~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 320 ATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred HHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 8888888775 6789999999766655 888888888877654
No 70
>PRK10054 putative transporter; Provisional
Probab=99.97 E-value=2.3e-28 Score=221.63 Aligned_cols=312 Identities=16% Similarity=0.090 Sum_probs=222.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++++++++.|+++||+|||++++++.++..++.++.+++++++.++++|++.|.+.+...+...++..|.+|+++|+++
T Consensus 54 ~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (395)
T PRK10054 54 TIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKI 133 (395)
T ss_pred HHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHH
Confidence 35677899999999999999999999999999999999999999999999999988888888899999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.....++|.+++|.+++.+.+ .+|+.+|++.++..++..++..+..|++.+. ++++..
T Consensus 134 ~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~----~~~~~~-------------- 194 (395)
T PRK10054 134 FSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA----IATETG-------------- 194 (395)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----cccchh--------------
Confidence 999999999999999999999875 6999999998887766655555544543211 000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc--c
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS--N 239 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 239 (421)
+ ..+.++.+++|.++...+..++.......+..+.+.|..+..+.+ .
T Consensus 195 --------------------------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (395)
T PRK10054 195 --------------------------S-----VWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAE 243 (395)
T ss_pred --------------------------h-----hhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHH
Confidence 0 011245667888877777666666666556566677665443322 2
Q ss_pred chh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh-hhhhHHHHHHHHHHHHHHHhccCc
Q 014628 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
... .+.....+.........+++.||.++| +.+..+..+.......... .++.+.+.+...+.+.+.....+.
T Consensus 244 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~ 318 (395)
T PRK10054 244 KVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPG 318 (395)
T ss_pred HHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhh
Confidence 222 222333344445556778888988877 5555554444444333332 244444555566666676666667
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHH
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 371 (421)
....+.+..|++.++++.+..+ ..+. |..+||.+.|.+.|+.| +...+.+.
T Consensus 319 ~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~~~ 369 (395)
T PRK10054 319 EYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFVIL 369 (395)
T ss_pred HHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHHHH
Confidence 7778888889999999988763 4444 88999999999999886 43444443
No 71
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.97 E-value=6.4e-28 Score=216.62 Aligned_cols=305 Identities=14% Similarity=0.048 Sum_probs=215.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.|++.+...+....++.|++| ++|+++
T Consensus 46 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~~~ 123 (355)
T TIGR00896 46 LCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVGLM 123 (355)
T ss_pred HHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhhHH
Confidence 4678899999999999999999999999988888887 78899999999999999999888888889999986 579999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcc--hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
+++++.+.++|..+++.+++.+.++. +||+.|...+++.++... ...|+.++. +++++..
T Consensus 124 ~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~~~~~~---~~~~~~~------------ 185 (355)
T TIGR00896 124 TGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIPQVRRR---VAANQTT------------ 185 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhhhhccc---cCCCCCC------------
Confidence 99999999999999999998887764 399999887665433221 223432211 0000000
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+ ....++.+++|.++...+..++....++....|+|.|+++ .+.+.
T Consensus 186 -------------------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~ 231 (355)
T TIGR00896 186 -------------------T--------------RLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASA 231 (355)
T ss_pred -------------------C--------------CCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 0 0112345677877776666666667777888899999987 46665
Q ss_pred chh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 240 ADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 ~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... ...+...++.+++.+..|++.||+++|+ ..+.....+.....+......+..... ...+.+++.+...+..
T Consensus 232 ~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~g~~~~~~ 306 (355)
T TIGR00896 232 ATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQGGAFPLA 306 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhhhhHhHHH
Confidence 443 4456778889999999999999995441 344444444433333333332222222 3445566666666655
Q ss_pred hhhhhcccC-CchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchh
Q 014628 319 NYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 366 (421)
Q Consensus 319 ~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 366 (421)
.....+..+ +++++...++.+...+. +..++|.+.|++.|+.|+|..
T Consensus 307 ~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~ 354 (355)
T TIGR00896 307 LTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWLM 354 (355)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccCC
Confidence 555555444 46778888988655555 778899999999999887643
No 72
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.97 E-value=6.4e-28 Score=218.36 Aligned_cols=316 Identities=12% Similarity=0.004 Sum_probs=232.9
Q ss_pred cccchhhHHHHhhhhcCCchHH----HHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 3 GLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+..++++++|+++||+|||+.. ..+..+..+ ..+..+++++.+++.|+++|.+.+...|...++..++ +++|
T Consensus 51 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~p~~~al~~~~--~~~~ 126 (382)
T TIGR00902 51 ARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFALFFSAGMPIGDALANTW--QKQF 126 (382)
T ss_pred HHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHHHHHccchhHHHHHHHHH--HHHc
Confidence 4567889999999999985433 233222222 2445788999999999999999988888888887765 4678
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
+++++......++|.+++|++++.+.+++|||..|++.++... ..++.+...|+.++. ++.+.. +
T Consensus 127 ~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~~---~------- 191 (382)
T TIGR00902 127 GLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIPPK----DAIPED---E------- 191 (382)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCCCC----cccccc---c-------
Confidence 9999999999999999999999999999999999988765532 222333222221110 000000 0
Q ss_pred ccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCc
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS 238 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (421)
. +..++.++++|+|+++...+..++.......+..+.|.|+++ .+.+
T Consensus 192 ------------------~--------------~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s 238 (382)
T TIGR00902 192 ------------------S--------------QGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGIS 238 (382)
T ss_pred ------------------c--------------ccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCC
Confidence 0 001235577899999998888888888888888899999987 5666
Q ss_pred cchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCc
Q 014628 239 NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 239 ~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
+... ....+..+..+++.+..+++.||+++| +.+..+.+............++.+..+....+.++..+...+.
T Consensus 239 ~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~ 313 (382)
T TIGR00902 239 ASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLA 313 (382)
T ss_pred HhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 5444 333556677788888899999999988 7777777777777666666777777777888888888888888
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
...++.+. |++++++++++++.....+|..++|.+.|++.|+.| + ..+...+.+.+.+
T Consensus 314 ~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~~~~~ 371 (382)
T TIGR00902 314 AMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAIIAAAA 371 (382)
T ss_pred HHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHHHHHH
Confidence 88888887 888999999998755555589999999999999886 4 4566555555443
No 73
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.97 E-value=7.4e-28 Score=228.33 Aligned_cols=336 Identities=20% Similarity=0.308 Sum_probs=241.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh---------------------------------------
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--------------------------------------- 42 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 42 (421)
+|++++.++.|+++||+|||+++.+++++++++++++++.+
T Consensus 79 i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 158 (633)
T TIGR00805 79 IGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSSTGNLSSANSFLCMENLTQALRPTQC 158 (633)
T ss_pred HHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccccccccccccccccCCCCCCcccccc
Confidence 57889999999999999999999999999999999988764
Q ss_pred ------------hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcc---
Q 014628 43 ------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--- 107 (421)
Q Consensus 43 ------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~--- 107 (421)
.+..++++|+++|+|.+..++...+++.|++|+++|+++++++..+..+|.++|+++++++.+.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~ 238 (633)
T TIGR00805 159 PSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSFCLQIYVDT 238 (633)
T ss_pred ccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHHHHhccccc
Confidence 24567889999999999999999999999999999999999999999999999999999887542
Q ss_pred -------------------hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCcccccc
Q 014628 108 -------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 168 (421)
Q Consensus 108 -------------------~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (421)
+|+..|++.+++.++.++..+ ..|++.+.....++.+.... + ..+ .
T Consensus 239 ~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~~~~~~~~~~-~---~~~---~------- 303 (633)
T TIGR00805 239 GSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGKRVNVDVHET-E---KLE---K------- 303 (633)
T ss_pred ccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCcccccchhhhhh-h---ccc---c-------
Confidence 288889999888877776544 44554322110000000000 0 000 0
Q ss_pred cchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHH-hh
Q 014628 169 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GV 247 (421)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 247 (421)
.+ +.. +.......++..+..+.++++|.++...+..++.....+++.+|+|.|+++.++.++....+. ..
T Consensus 304 --~~---~~~----~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~~~ 374 (633)
T TIGR00805 304 --SE---DKS----RKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLIGV 374 (633)
T ss_pred --cc---ccc----chhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHhhh
Confidence 00 000 000001223344567889999999999999999999999999999999999999987655333 33
Q ss_pred hhH-HHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHH---------------------------Hh------
Q 014628 248 TIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA---------------------------FC------ 293 (421)
Q Consensus 248 ~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~------ 293 (421)
..+ +.+++.+++|+++||++.+.+...+......++........ ..
T Consensus 375 ~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~agv~~~y~~~~~~~~~~~~Cn~~C~ 454 (633)
T TIGR00805 375 VNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCESAPVAGVNNPSTDQSIYVENPTDCNRQCS 454 (633)
T ss_pred hhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCCCccceeeccCCCcccCCCChhccCCCCC
Confidence 333 56789999999999998664322222222222221111100 00
Q ss_pred --h---------------------------------------------------------hh-hHHHHHHHHHHHHHHHh
Q 014628 294 --L---------------------------------------------------------SS-LYGFLALFTVGELLVFA 313 (421)
Q Consensus 294 --~---------------------------------------------------------~~-~~~~~~~~~~~~~~~~~ 313 (421)
. .+ ...+++..++..+..+.
T Consensus 455 C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~~g~C~~~C~~~~~~f~~~~~~~~~~~~~ 534 (633)
T TIGR00805 455 CDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAKKGLCNPPCATSLLYFLILFIPLSFIAFI 534 (633)
T ss_pred CCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCcCCCCCcccchhHHHHHHHHHHHHHHHHh
Confidence 0 00 22334444555566667
Q ss_pred ccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 314 TQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
...+...++.+.+|+++|+.+.|+.....+.+|.+-+|+++|++.|..
T Consensus 535 ~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 535 TAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred ccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 778888899999999999999999999999999999999999999864
No 74
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=5.6e-28 Score=249.10 Aligned_cols=312 Identities=13% Similarity=0.018 Sum_probs=224.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++++++++++|+++||+|||++++++.++..++.++.. .+++++.++++|+++|++.+...++..+++.|++|+++|
T Consensus 58 l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 137 (1146)
T PRK08633 58 LPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENL 137 (1146)
T ss_pred HHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccc
Confidence 46788999999999999999999998877666555443 457899999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhc---------chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhh
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 149 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (421)
++++++.+.+.++|.++|+.+++++.+. .+|++.+.+..+...+..++..+..|+.+......++.+..
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 215 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFAYRLPKVPAAAPEVFDKKKY-- 215 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHHhcCcCCCCCCccccccccc--
Confidence 9999999999999999999999998875 23555554444443333334444445543221100000000
Q ss_pred hhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhH
Q 014628 150 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
...++....++.+++++.++...+..++..........++|.
T Consensus 216 --------------------------------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (1146)
T PRK08633 216 --------------------------------------LFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPA 257 (1146)
T ss_pred --------------------------------------ccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 001112244666778888888777766666667777888999
Q ss_pred HHHHhhCCccc-hh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 014628 230 AGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 307 (421)
Q Consensus 230 ~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (421)
|+.+.++.+.. .. .+.....++.+++.++.+++.||++++ +.+..+.++.++..+......+.+..++..++.
T Consensus 258 ~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1146)
T PRK08633 258 YAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALGLALSLFLLPTAPSLASVLVLFFLF 332 (1146)
T ss_pred HHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 99888888765 43 444666778889999999999999876 444444444444444444445556666666777
Q ss_pred HHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 308 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+++.+...++...++.+..|++.||+++|+.+..... |.++++.+.+.+..
T Consensus 333 g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 333 GFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 7777777778888899999999999999999766665 77666655555443
No 75
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.96 E-value=8.6e-28 Score=217.11 Aligned_cols=300 Identities=16% Similarity=0.119 Sum_probs=205.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
+++++++++.|+++||+|||+++.++.++..++.+++++++ +++.+++.|+++|++.+. .+....++.|++|+++|++
T Consensus 48 ~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~r~~ 126 (366)
T TIGR00886 48 LAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIGIAGGS-FASCMPWISFFFPKKIQGT 126 (366)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhchh-hHhHHHHHHHhcCHhhhhH
Confidence 46788999999999999999999999999999999999999 999999999999998664 5667889999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhh----------cchhHHHH-HHHHHHHHHHHHHHHhcccccccccCCccccchhhh
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 149 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~----------~~~wr~~f-~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 149 (421)
++++.....++|..+++.+++.+.+ +.+||+.| +..+++..+..++.+...||.++..+ ++++..
T Consensus 127 ~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-- 202 (366)
T TIGR00886 127 ALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLPALLIFFVGADTPPGKP--ATGKLS-- 202 (366)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHHHHHHHHhcccCCcccc--cchhcc--
Confidence 9999998888888888887766654 34899999 44455555555555555455332110 000000
Q ss_pred hhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhH
Q 014628 150 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
.... ... . ++ +..+..++.+++|.++...+..++..........+.|.
T Consensus 203 --------~~~~----~~~--~-------~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (366)
T TIGR00886 203 --------FKGA----RWS--V-------GT-----------GALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAM 250 (366)
T ss_pred --------cccc----ccc--c-------cc-----------hhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 0000 000 0 00 00112345667788887777766666677788889999
Q ss_pred HHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH-HHH-Hhhh--hhHHHHHHH
Q 014628 230 AGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC-LTA-FCLS--SLYGFLALF 304 (421)
Q Consensus 230 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~--~~~~~~~~~ 304 (421)
|+++.++.++.... +..+..+.++++.++.+++.||+++| +............. ++. .... +.+......
T Consensus 251 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (366)
T TIGR00886 251 FFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLF 325 (366)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHH
Confidence 99988887765553 45666778889999999999999987 33332222222222 222 2222 344444444
Q ss_pred HHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHh
Q 014628 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
.+...+.+...+.......+..| +++|+++|+.+...+.
T Consensus 326 ~~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 326 VALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccC
Confidence 55555666666666777777664 7899999998655443
No 76
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.1e-28 Score=227.19 Aligned_cols=379 Identities=15% Similarity=0.148 Sum_probs=244.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+|.+++++++|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|......+.+++|..|++.||..
T Consensus 100 lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~RG~l 179 (513)
T KOG0254|consen 100 LGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISEIAPAHIRGTL 179 (513)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhhcCChhhhHHH
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhc-chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
.+..+....+|..++..++....+. .+||..+.+..+++++..+. .++.||++++..+. .+....+.....+....
T Consensus 180 ~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~--g~~~~a~~~l~~l~g~~ 256 (513)
T KOG0254|consen 180 VSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEK--GRLEEAKRSLKRLRGLS 256 (513)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHc--CChHHHHHHHHHHhCCC
Confidence 9999999999999997666655443 58999999999999888888 77779988875432 22222222222222211
Q ss_pred --CCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhh----cchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 014628 161 --LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL----QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 161 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
+.+.+.+..+.....+...... + ..+++++ +++.+....+..+....+.+...+|.+.+++..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~---------~--~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~ 325 (513)
T KOG0254|consen 257 PEDVEVELELLKIKLLVEAEVAEG---------K--ASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA 325 (513)
T ss_pred CcchHHHHHHHHHHHHHhhhcccc---------c--ccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc
Confidence 1111111111000000000000 0 0111222 223333334434444445566677888887776
Q ss_pred hCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh------------hhhHHHHH
Q 014628 235 YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------------SSLYGFLA 302 (421)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~ 302 (421)
+..+.. .....+..+..+++..++.++.||+||| +.++.+.....++.++.... ...+..++
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 399 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIV 399 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHH
Confidence 655433 3334556677788888889999999998 66666555554444433211 11233444
Q ss_pred HHHHHHHHHHhccCchhh-hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHH
Q 014628 303 LFTVGELLVFATQAPVNY-VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 381 (421)
..++..........+..+ +..|.+|.+.|+++.++.....+.....+ ......+.+..+ ....+..+.....+....
T Consensus 400 ~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~~~~~~~~~ 477 (513)
T KOG0254|consen 400 FLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGGICLLSLII 477 (513)
T ss_pred HHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHHHHHHHHHH
Confidence 444455555556666655 56777888999999999977777755555 434445544433 123444444433333331
Q ss_pred HHHhhhhcc-ccccccccccccc
Q 014628 382 WFVGIFLKS-IDKFNEDGENQIS 403 (421)
Q Consensus 382 ~~~~~~~~~-~~~~~~~~~~~~~ 403 (421)
++....|| |+++.++.++...
T Consensus 478 -fv~~~~pETkg~sleei~~~~~ 499 (513)
T KOG0254|consen 478 -FVFFFVPETKGLTLEEINELFE 499 (513)
T ss_pred -HheEEcccCCCCcHHHHHHHHH
Confidence 22234565 7777776665443
No 77
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=1.6e-27 Score=198.35 Aligned_cols=362 Identities=14% Similarity=0.116 Sum_probs=241.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.|+.+++..+|..+|++|||+.+.+..+...+...+.+.++|+..+++.|.+.|+|.|+ .|...++-.|..|..+|..-
T Consensus 124 ~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~gg-~pv~~~~yle~lp~~~r~~~ 202 (528)
T KOG0253|consen 124 LGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGVGG-LPVDSAIYLEFLPSSHRWLL 202 (528)
T ss_pred hhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccCCC-ccHhHHHHHHhccCcCCCcc
Confidence 57889999999999999999999999999999999999999999999999999999998 88999999999999999887
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc-hhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK-AQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 160 (421)
+-.. ..+.+|.++...++..+..++||||.....+.+..+.+... ++.||+++..-.+.++. ....-++..+.+..+
T Consensus 203 ~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~-~w~~ESpRf~~~~G~~~kAletL~kiArmNg~q 280 (528)
T KOG0253|consen 203 TVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFL-VWVYESPRFYLAKGDDYKALETLHKIARMNGKQ 280 (528)
T ss_pred hhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHH-hhcccCcchhhhcCChHHHHHHHHHHHHhcCCC
Confidence 7777 99999999999999999999999999998886655555444 44588887643222221 111111112222211
Q ss_pred CCcc-cccccchhhhh-----hhccccchhhhhhhhhhhhhhhHHhhc----chhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014628 161 LNDH-VSEDISDQASE-----RSIKSIGESRFLNQLSQFSQDTKVLLQ----EKVYVVNVLGYIAYNFVIGAYSYWGPKA 230 (421)
Q Consensus 161 ~~~~-~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (421)
-... ......+++++ ++.+.+..+ +...+..+++. +..+. ....++...+.+++........
T Consensus 281 lplgvl~~s~~~~~e~e~~~~~~~~~~a~k-------e~rg~~~nLlsp~lrkttll-lw~iwfgnafsyyg~VLlttel 352 (528)
T KOG0253|consen 281 LPLGVLESSAIDRQEQEESDLDDSKSSAAK-------EVRGGTTNLLSPKLRKTTLL-LWRIWFGNAFSYYGSVLLTTEL 352 (528)
T ss_pred CCcceeeeehhhhhhhhhhchhhhhhcccc-------ccccchHhhcChHHHHHHHH-HHHHHHhhHHHHHHHHHHHHHH
Confidence 1111 00011111111 011111111 11112222222 12221 2222334444455544433332
Q ss_pred HHHhh-----------------C--Cc-cchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 014628 231 GYNIY-----------------H--MS-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 290 (421)
Q Consensus 231 ~~~~~-----------------~--~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
.+... + .+ .....-..+..+..+.|.++.+++.||+||| +.+..+.+++.++.++
T Consensus 353 fqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRK-----kTMal~l~~f~iflfl 427 (528)
T KOG0253|consen 353 FQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRK-----KTMALSLILFGIFLFL 427 (528)
T ss_pred HhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcch-----hHHHHHHHHHHHHHHH
Confidence 22211 1 11 1111223456678899999999999999999 8888888888888877
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHH
Q 014628 291 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 370 (421)
...........+..+..-++..+.+...+.+..|.+|+..|+++.|......++ |+++.|.+. ...+. ..+ .+..+
T Consensus 428 l~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcSsmaRI-ggI~~p~iA-~~~e~-s~s-l~i~v 503 (528)
T KOG0253|consen 428 LTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCSSMARI-GGIFSPVIA-MRAEL-STS-LPIFV 503 (528)
T ss_pred HHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhhhHHhh-hhhhhhHHH-HHhcc-cee-ehHHH
Confidence 777666666677778888888899999999999999999999999999655555 999999776 44443 223 44444
Q ss_pred HHHHHHHHHHHHH
Q 014628 371 LTSIFFLAAGIWF 383 (421)
Q Consensus 371 ~~~~~~~~~~~~~ 383 (421)
.+.+++++.+...
T Consensus 504 y~~~~ilagIavc 516 (528)
T KOG0253|consen 504 YGALFILAGIAVC 516 (528)
T ss_pred HHHHHHHHHHHhe
Confidence 5555545444443
No 78
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=5.5e-28 Score=203.59 Aligned_cols=325 Identities=14% Similarity=0.067 Sum_probs=239.9
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC-chhHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ-KTAWL 82 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~-r~~~~ 82 (421)
+.+.+++.|.+.||+|+|..+++|++....+++++++.++++.++++|.+||+|.+.....+.++++|.+|+++ |++++
T Consensus 119 qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~vm 198 (464)
T KOG3764|consen 119 QLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSVM 198 (464)
T ss_pred HHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHHH
Confidence 46778999999999999999999999999999999999999999999999999999999999999999999764 89999
Q ss_pred HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCC
Q 014628 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN 162 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (421)
|+.-.+.++|..+||++||.+.+..|.+.+|++.+++.++-..+.++..+.+..+. ++..+
T Consensus 199 GialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~--~~~~~----------------- 259 (464)
T KOG3764|consen 199 GIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDP--DSTEQ----------------- 259 (464)
T ss_pred HHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCc--ccccc-----------------
Confidence 99999999999999999999999999999999999999999888888774322111 00100
Q ss_pred cccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh
Q 014628 163 DHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM 242 (421)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (421)
..++++++++|.++.........+.......-.++.+..+....+....
T Consensus 260 -------------------------------~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~ 308 (464)
T KOG3764|consen 260 -------------------------------GTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEV 308 (464)
T ss_pred -------------------------------CccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcce
Confidence 0246678889998887766555555555555566677777776544344
Q ss_pred HHH-hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHH---HHHHHHHHHHhccCch
Q 014628 243 MFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA---LFTVGELLVFATQAPV 318 (421)
Q Consensus 243 ~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~ 318 (421)
.+. ....+...++..+.|.+.||+++.+ |.....+.+..+..+......++....++ ..++.+........+.
T Consensus 309 G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~ 385 (464)
T KOG3764|consen 309 GLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPT 385 (464)
T ss_pred eeeecccccchhccCchHHHHHHhcCchh---HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhh
Confidence 333 3345777899999999999999541 13334444444444444444444433333 3333333344455555
Q ss_pred hhhhhcccCCc---hhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 319 NYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 319 ~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..++.+....+ ..|...++....... |..+||.+.|.+.+..| +.+.....+...+.-.-++.
T Consensus 386 l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~n~iyapvl~ 451 (464)
T KOG3764|consen 386 LGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGILNLIYAPVLL 451 (464)
T ss_pred hHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHHHHHHHHHHH
Confidence 66666655444 678899998665555 99999999999999988 66666666555555444443
No 79
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4e-27 Score=221.88 Aligned_cols=336 Identities=15% Similarity=0.151 Sum_probs=221.1
Q ss_pred CccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 1 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 1 ~lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
++|.++|++++|+++||+|||+++++++++..++.++.++++|++.+++.|++.|++.++.......++.|++++++|+.
T Consensus 128 ~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~ 207 (521)
T KOG0255|consen 128 FLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGL 207 (521)
T ss_pred HHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+..+ ......+..++++.++++.+ +||+.+++..+++++..++ +++.||++++...+.+.++. .+..++..+.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a--~~~l~~~a~~n 281 (521)
T KOG0255|consen 208 ALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEA--IKILKKIAKLN 281 (521)
T ss_pred HHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHH--HHHHHHHHhhc
Confidence 9999 77777888888888888877 7999999999998877666 55557988876444333222 11111111111
Q ss_pred C-CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 161 L-NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 161 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
. ..+..+........+.... ...+....+.++++.|++....+...+..+. ....++.-.+.....+.+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~-~~~~y~gl~~~~~~lg~~- 351 (521)
T KOG0255|consen 282 GRKLSVKELLRLELLLRPLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFV-FSLVYYGLSLNVSGLGGN- 351 (521)
T ss_pred CCCCCcHHHHHHHHHhhHhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHH-HhHHHHhhhhhhhhcCch-
Confidence 0 0000011111000000000 0000012245566666443333322222211 122222222222223322
Q ss_pred chhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHHHhccC
Q 014628 240 ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL---YGFLALFTVGELLVFATQA 316 (421)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 316 (421)
......+.......+....+...|+.||| ........+..++++...+.... +...+...+..++.+..+.
T Consensus 352 -~~~~~~~~~~~~~p~~~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 425 (521)
T KOG0255|consen 352 -IYLNFTLSGLVELPAYFRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFN 425 (521)
T ss_pred -HHHHHHHHHHHHhhHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Confidence 11222333345666677778999999888 66666666666666555544322 2355566666677777777
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
..+.+..|.+|+..|+.+.+..+..... |.+++|.+.-....
T Consensus 426 ~~~~~~~el~pt~~r~~~~~~~~~~~~~-~~i~ap~~~~~~~~ 467 (521)
T KOG0255|consen 426 LIFLYSAELIPTVVRNTAVGAISAAARL-GSILAPLFPLLLRQ 467 (521)
T ss_pred HHHHHHHhhccHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhh
Confidence 7899999999999999999999655554 88888866544433
No 80
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.96 E-value=1.3e-26 Score=209.91 Aligned_cols=313 Identities=13% Similarity=0.043 Sum_probs=218.0
Q ss_pred ccccchhhHHHHhhhhcCCc----hHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 2 VGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++..++++++|++.||+||| +.+.+...+. .......+++++.+++.|++.|++.+...|...+++.++ +++
T Consensus 50 l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~~~~--~~~ 125 (382)
T PRK11128 50 VARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFNLFFSPLVPLTDALANTW--QKQ 125 (382)
T ss_pred HHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHHHHHcccccHHHHHHHHH--Hhh
Confidence 34577899999999999994 3333332222 223344568899999999999999998999888888877 355
Q ss_pred chhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccc
Q 014628 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
|+++++......++|.++||++++++.+++|||..|++.++..++..+ ..+..||..+. +++++.
T Consensus 126 ~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~---------- 190 (382)
T PRK11128 126 IGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIMPQ----GESRQQ---------- 190 (382)
T ss_pred ccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCCCc----cccccc----------
Confidence 888899999999999999999999999999999999988765444333 33333432110 000000
Q ss_pred cccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCC
Q 014628 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
. ++..+++++++|+|.++...+..++..........+.|.|.++ .+.
T Consensus 191 --------------------~------------~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~ 237 (382)
T PRK11128 191 --------------------E------------SAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGY 237 (382)
T ss_pred --------------------c------------ccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCC
Confidence 0 0001245678899999888777777777777777888888876 566
Q ss_pred ccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
++... .+..+..+..++..++.+++.||++++ +.+..+........+.....++.+..++..++.+++.+...+
T Consensus 238 s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 312 (382)
T PRK11128 238 SASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHL 312 (382)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 64333 333455677788888899999999887 666666655555555555566667666677777777777667
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
....+..+. +++++++..+..+......|..++|.+.|.+.|..|. ..++..+.+
T Consensus 313 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~~~~~~~~~ 367 (382)
T PRK11128 313 AAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--GVFWVMALV 367 (382)
T ss_pred HHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHH
Confidence 777776665 5666788899886555555778899999999998873 344444433
No 81
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.96 E-value=6.6e-26 Score=206.78 Aligned_cols=316 Identities=16% Similarity=0.108 Sum_probs=206.3
Q ss_pred chhhHHHHhhhhc-----CCch-HHHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 6 VASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 i~~~~~g~l~Dr~-----Grr~-~~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+..+++|+++||+ |||| ++..+.++.+++..+.++. ++++.+++..++.++..+...+...+++.|++|+|
T Consensus 47 ~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~ 126 (402)
T PRK11902 47 IFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPE 126 (402)
T ss_pred HHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChh
Confidence 5789999999999 8876 7888888888877777776 45778888888889889989999999999999999
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhc-chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
+|+++.++...+..+|.++++.++..+.+. .|||..|++.+++.++..+.. +..||+++.. ++++..
T Consensus 127 ~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~~-~~~~e~~~~~---~~~~~~-------- 194 (402)
T PRK11902 127 ERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALTT-LWAPEPEVPA---RPPRSL-------- 194 (402)
T ss_pred hhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH-HhcCCCcccc---cccchh--------
Confidence 999999999999999999999999998885 599999999988766554433 3345422110 000000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
.++..+++++++++|.++...+..++..........+.+.++.+..
T Consensus 195 ----------------------------------~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~ 240 (402)
T PRK11902 195 ----------------------------------GEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGA 240 (402)
T ss_pred ----------------------------------HHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhc
Confidence 0011234667788998887776665555444333344555666667
Q ss_pred CCccchhHHH-hh-hhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH---HHHhh-hhhHHHHHHHHH---
Q 014628 236 HMSNADMMFG-GV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCL-SSLYGFLALFTV--- 306 (421)
Q Consensus 236 ~~~~~~~~~~-~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~--- 306 (421)
+.++....+. .. ...+.+++.++++++.||+++| +.+........+..+ ..... ++.+.......+
T Consensus 241 G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (402)
T PRK11902 241 GFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENL 315 (402)
T ss_pred CCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Confidence 7776554333 22 2345788999999999999987 444433333222221 11222 333433333322
Q ss_pred -HHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 307 -GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 307 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
.++..+........++.+..|.+++ ++.+...+. +...++.+.|.+.|..| +...|...+.+.+.+
T Consensus 316 ~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l-~~~~~~~~~G~l~~~~G-~~~~f~~~~~~~~~~ 382 (402)
T PRK11902 316 CGGMGTAAFVALLMALCNRSFSATQY----ALLSALASV-GRVYVGPTSGYLVEAYG-WPGFYLMTVVIALPG 382 (402)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH----HHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHH
Confidence 3333444445555566666655444 444333333 55444568999999987 656566655554444
No 82
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.96 E-value=2.6e-33 Score=259.98 Aligned_cols=372 Identities=19% Similarity=0.217 Sum_probs=236.7
Q ss_pred CccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh---hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC
Q 014628 1 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 1 ~lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++|..+|++++|+++||+|||+.+.++.++..+++++.++++ |++.+.++|+++|++.|...+....++.|..|+++
T Consensus 56 ~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~~ 135 (451)
T PF00083_consen 56 FIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPKH 135 (451)
T ss_pred Hhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 368899999999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHHhhhHHHhHHhhhhcc---hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccc
Q 014628 78 KTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
|++..++.+.+..+|.+++..++..+.+.. +||..+.+.++++++..+.. ++.||+|++.-.+++.+ +.++..+
T Consensus 136 R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~~--~A~~~l~ 212 (451)
T PF00083_consen 136 RGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRDE--EAEKVLR 212 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceeccccccc--ccccccc
Confidence 999999999999999999988876654433 49999999998887665544 55699998864443333 2222222
Q ss_pred ccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchh-----HHHHHHHHHHHHHHHHHHHHHhhH
Q 014628 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFVIGAYSYWGPK 229 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 229 (421)
+.++.+..++..++..++.++.++++ ..++++++++. +....+..+...........+.|.
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~ 278 (451)
T PF00083_consen 213 KLRGKEIEDEEIEEIKAEKKESQESK--------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPS 278 (451)
T ss_pred cccccccccccccccccccccccccc--------------eeeeeccccccccccccccccccccccccccccccccccc
Confidence 22222111111111111111100000 12333333322 222222112212223344555666
Q ss_pred HHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-----hhhh----hHHH
Q 014628 230 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLSS----LYGF 300 (421)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~----~~~~ 300 (421)
+.++. +.+.. ........+...++.+++.++.||+||| +.++.+.....+..+... ..++ ....
T Consensus 279 i~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (451)
T PF00083_consen 279 IFENA-GISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILS 351 (451)
T ss_pred ccccc-ccccc-cccccccccccccccccccccccccccc-----ccccccccccccccccccccccccccccccccccc
Confidence 55553 33332 2223444566677788888999999998 666555555444433331 1112 1222
Q ss_pred HHHHHHHHHHHH-hccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 301 LALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 301 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
++...+...+.+ +..+....+..|.+|++.|+++.++.+...+. +++++|.+.+.+.+..+.+ ..+.+.+.+.++..
T Consensus 352 i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~~i~~~~~~i~~ 429 (451)
T PF00083_consen 352 IVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVFLIFAGVCLIAI 429 (451)
T ss_pred ceeeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc-ccchhhHHHHHHHH
Confidence 223333333333 33344457779999999999999999766665 8888888888888876533 34444444433333
Q ss_pred HHHHHhhhhcc-cccccccccc
Q 014628 380 GIWFVGIFLKS-IDKFNEDGEN 400 (421)
Q Consensus 380 ~~~~~~~~~~~-~~~~~~~~~~ 400 (421)
+. ...+.|| |+++.+|.++
T Consensus 430 i~--~~~~lpET~g~~l~ei~~ 449 (451)
T PF00083_consen 430 IF--VYFFLPETKGKTLEEIQE 449 (451)
T ss_pred hh--eeEEEeeCCCCCHHHHHh
Confidence 22 2235566 7777776654
No 83
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.95 E-value=6.1e-26 Score=203.96 Aligned_cols=284 Identities=13% Similarity=0.093 Sum_probs=206.6
Q ss_pred hhHHHHhhhhc-----CCchH-HHHHHHHHHHHHhhhhhh---hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 8 SPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 8 ~~~~g~l~Dr~-----Grr~~-~~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
.+++|+++||+ ||||. ++.+.++.++.....++. .+.+.+....++.+++.+...+...+++.|++|+|+|
T Consensus 38 ~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r 117 (356)
T TIGR00901 38 KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEEL 117 (356)
T ss_pred HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhh
Confidence 88999999998 89997 567777777777777776 4666777788888998898899999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcch--------hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhh
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA 150 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~--------wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 150 (421)
+++.++...+.++|.++++.+++.+.+..+ ||..|++.++..++..+..++..||..+. ++++ + .
T Consensus 118 ~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~~~~~~~~~~~e~~~~--~~~~-~-~--- 190 (356)
T TIGR00901 118 GYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILPGLLVTLFLAKEPQED--ASVP-K-P--- 190 (356)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHHHHHHHHHhccCCCcc--cccc-h-h---
Confidence 999999999999999999999999988888 99999999987777655555444542110 0000 0 0
Q ss_pred hcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchh---HHHHHHHHHHHHHHHHHHHHHh
Q 014628 151 SVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
..++..+.++.++++|. ++...+..++.....+....+.
T Consensus 191 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (356)
T TIGR00901 191 --------------------------------------LTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLT 232 (356)
T ss_pred --------------------------------------HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00001124455666664 6666666666677777888899
Q ss_pred hHHHHHhhCCccchhHH-Hhh-hhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-----------
Q 014628 228 PKAGYNIYHMSNADMMF-GGV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----------- 294 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 294 (421)
|.|+++ .+.+..+... ... ..+..+++.++++++.||+++| +.+....++...........
T Consensus 233 ~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (356)
T TIGR00901 233 TLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-----YALLLFGIVQALTNAGFVWLASNGHHDGITF 306 (356)
T ss_pred HHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----HHHHHHHHHHHHHHHHHHHHHhcCccccccc
Confidence 999988 6777555432 233 3356788999999999999987 55554444444433322221
Q ss_pred hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHH
Q 014628 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSI 342 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 342 (421)
++.+......++.+++.+...+....+..+.+|+++|++..|+.+...
T Consensus 307 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 307 PHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred chHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 233444555556677778888899999999999999999999986544
No 84
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.95 E-value=1.9e-26 Score=211.62 Aligned_cols=330 Identities=16% Similarity=0.081 Sum_probs=203.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh---hhhh-----HHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFD-----FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.++++++|+++||+|||++++++..+..++..... .++. ....++.+++.|.+.....+....+..+ .
T Consensus 57 l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 135 (420)
T PRK09528 57 LFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIER-V 135 (420)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHH-H
Confidence 45678999999999999999999887666654433221 1111 1112223333333333222223333222 2
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
.+++++.++......++|..++|.+++.+.+. +|+++|++.+++.++..++.++..|+.++.. +..++.
T Consensus 136 -~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~~-~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~------ 204 (420)
T PRK09528 136 -SRRSGFEYGRARMWGSLGWALCAFIAGILFNI-NPQINFWLGSGSALILLVLLFFAKPDAPSTA---KVANAL------ 204 (420)
T ss_pred -HhhccccchhhHHhhhHHHHHHHHHHHHHHhc-CchHhHHHHHHHHHHHHHHHhcccccccchh---hhccch------
Confidence 24577888999999999999999999988764 8999999988887766666555544321110 000000
Q ss_pred cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
+ ++++ +...++.+..+|+|.++...+........+.....+.|.|+.+
T Consensus 205 ------------------~---~~~~-----------~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~ 252 (420)
T PRK09528 205 ------------------G---ANAS-----------AVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFAS 252 (420)
T ss_pred ------------------h---cccc-----------cccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0000 0001234456678877765555444444455555567777765
Q ss_pred hhC---Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 014628 234 IYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 234 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
..+ .+.... ...++..+...++.++.|++.||+++| +.+.....+..+...+....++.+.......+.+.
T Consensus 253 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~ 327 (420)
T PRK09528 253 FFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAF 327 (420)
T ss_pred HHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 542 222222 333555667788999999999999998 66655555555544444445566655555555555
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHH-HHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
......+....+..+..|++.+++..+. .+.... +|.+++|.+.|++.|..| |+..+...+.+.++..++.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~-lg~~ig~~~~G~l~~~~G-~~~~f~~~~~~~~i~~~~~ 399 (420)
T PRK09528 328 EVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQ-LGAVFLSTLAGNLYDSIG-FQGTYLILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHH-HHHHHHHHHHHHHHHhhC-chHHHHHHHHHHHHHHHHH
Confidence 5555555566778888899888887665 434444 488999999999999876 7778887776655444333
No 85
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.95 E-value=1.1e-25 Score=205.29 Aligned_cols=324 Identities=10% Similarity=0.020 Sum_probs=214.4
Q ss_pred ccccchhhHHHHhhhhcCC-chHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhh--------cc
Q 014628 2 VGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID--------DN 72 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Gr-r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~--------~~ 72 (421)
++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+.+.|++.|++.+...+...++.. |.
T Consensus 49 ~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~g~~~ 128 (418)
T TIGR00889 49 IAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAYMPTIALTNSISYANLPQAGLDV 128 (418)
T ss_pred HHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHccHHHHHHHHHHHHHhhcCCCc
Confidence 4678899999999999965 77888889988888888899999999999999999987766666555432 22
Q ss_pred CCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhc
Q 014628 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 152 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 152 (421)
.....|.|..| .+|.++||.+++.+.....|+ +|++.++..++..++ .+..||.++.. ++++..
T Consensus 129 ~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~-~~~~~e~~~~~---~~~~~~----- 192 (418)
T TIGR00889 129 VTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF-ALTLPDIPVAK---STAKMS----- 192 (418)
T ss_pred hhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH-HhcCCCCCCCc---cccccC-----
Confidence 22234555555 468888888888774433454 455666655555443 33446542110 000000
Q ss_pred ccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014628 153 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
. . +....+.+.++|+|.++...+..++..........+.|.+.+
T Consensus 193 -------------------~---------------~--~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (418)
T TIGR00889 193 -------------------I---------------K--VMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLH 236 (418)
T ss_pred -------------------H---------------H--HHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHH
Confidence 0 0 000012345678888877777766666655566677788877
Q ss_pred HhhCCcc-------ch-hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh-h---hHHH
Q 014628 233 NIYHMSN-------AD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS-S---LYGF 300 (421)
Q Consensus 233 ~~~~~~~-------~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~ 300 (421)
+.+.... .. ....++..+..+++.+..+++.||+++| +.+..+.++..+......... + .+..
T Consensus 237 ~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l 311 (418)
T TIGR00889 237 EFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVMLLSLVAWALRFGFFAYGDPEYFGYALL 311 (418)
T ss_pred HhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcCcchhhHHHH
Confidence 6432211 11 2334566677888899999999999998 777666666655544333322 1 2334
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc-----chhhhHHHHHHH
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-----WRKTTLALTSIF 375 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-----~~~~~~~~~~~~ 375 (421)
++..++.+.+.+...+....++.+.+|++.|++++|+.+...+.+|.++||.+.|++.|+.|+ |+..|.+.+++.
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~ 391 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYI 391 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHH
Confidence 445556666666666777788899999999999999996455555889999999999998653 667777666665
Q ss_pred HHHHHHH
Q 014628 376 FLAAGIW 382 (421)
Q Consensus 376 ~~~~~~~ 382 (421)
+++.+..
T Consensus 392 ~i~~~l~ 398 (418)
T TIGR00889 392 AILAVLF 398 (418)
T ss_pred HHHHHHH
Confidence 5554433
No 86
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.95 E-value=6.3e-28 Score=206.92 Aligned_cols=376 Identities=16% Similarity=0.148 Sum_probs=241.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh-------hHHHHHHHHHHhhhhhhhhccchhhhhhccCC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
+|.++||++.|+++||+|||+++...+++..+++++++++. -.+++.+.|++.|+|.|+-+|.+.++.+|...
T Consensus 95 vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an 174 (538)
T KOG0252|consen 95 VGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESAN 174 (538)
T ss_pred HHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhh
Confidence 68899999999999999999999999999999999888763 25788899999999999999999999999999
Q ss_pred CCCchhHHHHHHHHHHHHhhhHHHhHHhhhhc---------------chhHHHHHHHHHHHHHHHHHHHhcccccccccC
Q 014628 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 139 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~---------------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 139 (421)
++.||...+...+..+.|...|.+++-.+..- .=||..|.+.+++++..... -+..||+.+...
T Consensus 175 ~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~-Rl~M~Et~~Y~a 253 (538)
T KOG0252|consen 175 KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYF-RLKMPETARYTA 253 (538)
T ss_pred hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHh-hhcCCcchhHHH
Confidence 99999999998888888888888777555421 13999999888766544332 223377655431
Q ss_pred CccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHH
Q 014628 140 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 219 (421)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (421)
..++...... .+..+....++.++...+...+ +..++.+.+.+.+... .-+........++.....
T Consensus 254 l~~~~~~~a~---------~d~~k~~~~~~~~~~~~~~~~~----~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 254 LVSKKLKQAA---------GDMKKVLSVDIEAESTAESDVP----PPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred HhhcCHhhhh---------hccccccccccchhhccccCCC----CcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhh
Confidence 1111100000 0000000111111111100000 0001111111111111 224556667778888888
Q ss_pred HHHHHHHhhHHHHHhhCCccchh---------HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 014628 220 IGAYSYWGPKAGYNIYHMSNADM---------MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 290 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
++....+....+.+..-.+.... .-..+.....++|..+..+++|++||+ +..+..+.+..+..+.
T Consensus 320 fy~~nL~~s~I~~~ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~ 394 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSAIGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFV 394 (538)
T ss_pred hhccccHHHHHHHhhccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHH
Confidence 88888888888775433221111 111223344456777888899999998 6666666666665555
Q ss_pred HHhhhh----hHHHHHHHHHHHHHHH-hccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh-----c
Q 014628 291 AFCLSS----LYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----H 360 (421)
Q Consensus 291 ~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~ 360 (421)
+....+ ....++...+..++.+ +-......+.+|.+|.+.|++..|+. ...+-+|++++...+.++.+ .
T Consensus 395 ~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIs-AA~GK~GAivg~~~F~~~t~~~yp~~ 473 (538)
T KOG0252|consen 395 IAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGIS-AASGKAGAIVGAFGFLYLTDHNYPPN 473 (538)
T ss_pred HcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHH-HHhccchHHHHHHHhhHhhhccCCcc
Confidence 544333 2334444455444444 44455566778888889999999999 56666699999999998888 4
Q ss_pred cccchhhhHHHHHHHHHHHHHHHHhhhhcc-cccccccccccc
Q 014628 361 VNNWRKTTLALTSIFFLAAGIWFVGIFLKS-IDKFNEDGENQI 402 (421)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 402 (421)
.+ ....++..+.+...+.+..+ .++| +++..++.+++.
T Consensus 474 ~g-~~~v~~i~~~~~~~gi~~T~---l~pEtk~~~leei~~e~ 512 (538)
T KOG0252|consen 474 IG-VRNVFIILAGCMLLGILFTL---LIPETKGKSLEEISNEE 512 (538)
T ss_pred cc-chHHHHHHHHHHHHhHheeE---EeecccccCHHHhcChh
Confidence 33 56777777777666665554 3344 666666654433
No 87
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.95 E-value=1.4e-26 Score=194.07 Aligned_cols=343 Identities=13% Similarity=0.021 Sum_probs=205.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+++.+.++.+|.++||+|||+++++|++..++...+.+++.|+..++++|++.|+..| ...+..++++|.+++|+|+++
T Consensus 79 ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rAiisdV~sek~r~l~ 157 (451)
T KOG2615|consen 79 ILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRAIISDVVSEKYRPLG 157 (451)
T ss_pred HHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHHHHHhhcChhhccce
Confidence 4678899999999999999999999999999999999999999777778999999998 556789999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhh---cchhHHHHHHHH----HHHHHHHHHHHhcccccccccCCccccchhhhhhccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWGEA----ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~---~~~wr~~f~~~~----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
++......++|.++||.+|+++.+ ..| +.+|.... ++...-.....++.||+.+.+++.+++...
T Consensus 158 ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~~~~~~~~------- 229 (451)
T KOG2615|consen 158 MSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKRNDEHSTL------- 229 (451)
T ss_pred eeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhhcccccch-------
Confidence 999999999999999999999987 222 12222222 222221222334458876543322111100
Q ss_pred ccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh
Q 014628 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
.+..+++.+..+.+. .......++++..........+.+..+.+...+..+.++.+.+..+.
T Consensus 230 ---------------~~~~~~~~~~~~~~~---~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~r 291 (451)
T KOG2615|consen 230 ---------------QEAADDRLALLKFAR---IFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGR 291 (451)
T ss_pred ---------------hhhhhhhhhhcchhh---hhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCc
Confidence 000000000000000 00000000110000011122233334444455555555555554566
Q ss_pred hCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhc
Q 014628 235 YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFAT 314 (421)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (421)
+++++.+..- +....++.+.++.+.+..+..+........+......+....++...............+..+.....
T Consensus 292 fg~ss~~~G~--vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~ 369 (451)
T KOG2615|consen 292 FGYSSMQQGK--VLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASV 369 (451)
T ss_pred cCCChhhhee--eeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHh
Confidence 7777544422 12233344444555555554443211112333333333334444444444555555666666666677
Q ss_pred cCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 315 QAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
.+....+.....|+++||+.+|+....... +.++||.+.|.+..+...-+..+...+.+
T Consensus 370 vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws~~~~~a~~~~~~L 428 (451)
T KOG2615|consen 370 VTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWSQGAQPAYIAWGAL 428 (451)
T ss_pred hHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEecCCCceeeehHHH
Confidence 777788888889999999999999655554 99999999888877654343444444333
No 88
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.95 E-value=5.4e-26 Score=210.31 Aligned_cols=309 Identities=14% Similarity=0.123 Sum_probs=217.4
Q ss_pred cccchhhHHHHhhhh----cCCch-HHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhc
Q 014628 3 GLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr----~Grr~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ ...+++.+++.+++.+...+...++..|
T Consensus 47 ~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 126 (437)
T TIGR00792 47 LDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYITYILLGLFYSFVNIPYWSLVPA 126 (437)
T ss_pred HHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcccHhhCccc
Confidence 457889999999998 67744 677888888888887776654 4566778899999998888888889999
Q ss_pred cC-CCCCchhHHHHHHHHHHHHhhhHHHhHHhhh-------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccc
Q 014628 72 NA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 143 (421)
Q Consensus 72 ~~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 143 (421)
.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||+.+.+.++++++..++.++..||.++.. +++
T Consensus 127 ~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~e~~~~~--~~~ 204 (437)
T TIGR00792 127 ITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVVSLIICFFGTKERYSEI--PKN 204 (437)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHHHHHHHHcCCEecCCCC--Ccc
Confidence 87 4688999999999999998888777665554 2458999999999888877776666656532110 000
Q ss_pred cchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHH
Q 014628 144 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (421)
++ . ..+..+.++.++++|.++...+..++........
T Consensus 205 ~~-~------------------------------------------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 241 (437)
T TIGR00792 205 IE-K------------------------------------------KLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIK 241 (437)
T ss_pred cc-c------------------------------------------CCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0 0011234667788999888877777766666666
Q ss_pred HHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-hhhHHHHH
Q 014628 224 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-SSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 302 (421)
..+.+.|.+...+.+.....+..+..++.+++.++.+++.||+++| +.+..+..+..+..+..... ++.+...+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (437)
T TIGR00792 242 NGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGGILLMVLGYLIFFFAGSNLPLILV 316 (437)
T ss_pred cchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcchhHHHHHH
Confidence 5566666555444333233444556788899999999999999987 55555555544444433332 34444555
Q ss_pred HHHHHHHHHHhccCchhhhhhcccC-------CchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
..++.+++.+...+...+...|..+ ++.+|.+.|+.+..... |..+++.+.|.+.+..|
T Consensus 317 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~lg~~i~g~ll~~~G 382 (437)
T TIGR00792 317 LIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQALAGFLVGLILGIIG 382 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 5566667776666777777777654 45689999999766666 88999999999988765
No 89
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.95 E-value=2.8e-25 Score=188.72 Aligned_cols=306 Identities=17% Similarity=0.134 Sum_probs=246.3
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
.||.+.+++.|++.+|+|+|+.++.|+.++++++.+.. ...++..++.+-++.|.|.+........++....++++.
T Consensus 59 ~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a 138 (422)
T COG0738 59 GGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESA 138 (422)
T ss_pred HHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhH
Confidence 47889999999999999999999999999999999984 567899999999999999999999999999999999989
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhc-------------------chhHHHHHHHHHHHHHHHHHHHhcc-ccccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSH-------------------LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGF 138 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------------------~~wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~ 138 (421)
.+.+++.+...++|.+++|++++.+..+ ..||++|...+...++..+...... |+.....
T Consensus 139 ~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~~ 218 (422)
T COG0738 139 AFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVAA 218 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCccc
Confidence 9999999999999999999999988762 2488899988877666666555443 3321110
Q ss_pred CCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHH
Q 014628 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (421)
+++.+.. .....+++++|.++...+..+++..
T Consensus 219 --~~~~~~~----------------------------------------------~~~~~~l~~~~~~~~gvl~~FlYVG 250 (422)
T COG0738 219 --PSLGASG----------------------------------------------SAGLSSLFQNKHLRLGVLAIFLYVG 250 (422)
T ss_pred --ccccccc----------------------------------------------cchHHHHHhChHHHHHHHHHHHHHh
Confidence 0000000 0135578899999999999999999
Q ss_pred HHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
.......|++.|+.+..+.+..+. .+.+..+.+.++|++++.++..|+... +.+....+.....++.....++.
T Consensus 251 ~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~~~~vGRFig~~lm~~~~~~-----k~Laf~a~~~ill~~~~~l~~g~ 325 (422)
T COG0738 251 AEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWVGFMVGRFIGSALMSRIKPE-----KYLAFYALIAILLLLAVALIGGV 325 (422)
T ss_pred HHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHhcCh
Confidence 999999999999999877776555 556788899999999999999999887 77777777777666666666664
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
..+....+.+++.+..+|..++...+..| ++...+.++. .+..+|+++-|.+.|++.|..|..
T Consensus 326 -v~~~~l~~ig~F~simfPTIfslal~~l~-~~ts~~s~~l--~maivGGAiiP~l~G~i~d~~g~~ 388 (422)
T COG0738 326 -VALYALFLIGLFNSIMFPTIFSLALKNLG-EHTSVGSGLL--VMAIVGGAIIPPLQGVIADMFGIQ 388 (422)
T ss_pred -HHHHHHHHHHHHhHHHHHHHHHHHHhccC-ccccccceee--eeheecchHHHHHHHHHHHhhhhH
Confidence 34456667788899999999999999998 5555555554 455668888999999999998743
No 90
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.95 E-value=1.9e-25 Score=203.50 Aligned_cols=328 Identities=13% Similarity=0.059 Sum_probs=213.6
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhh---hhh-----hhHHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-----FDFWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~---~~~-----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
+++.+++++.|+++||+|||+.++.+.....++.... .+. +.+..+++.|++.|++.+...+....+..|..
T Consensus 49 l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 128 (396)
T TIGR00882 49 LFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS 128 (396)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh
Confidence 4567899999999999999999988777665544332 111 22344566788899888888888877777753
Q ss_pred CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcc
Q 014628 74 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVS 153 (421)
Q Consensus 74 ~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 153 (421)
+ +++..++......++|.++||.+++.+.+ .+||.+|++.+++.++..++.+...|+.+++ ++.+.. .
T Consensus 129 ~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----~- 196 (396)
T TIGR00882 129 R--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKAPSS----ATVANA----L- 196 (396)
T ss_pred h--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCCchh----hhhhcc----c-
Confidence 2 34567788888889999999999998865 5999999999888877766655544432111 000000 0
Q ss_pred cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHH
Q 014628 154 EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN 233 (421)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (421)
+ . + +++ ...++.++++++|.++...+..+.....+.....+.|.|+++
T Consensus 197 ----------------~--~--~-~~~-----------~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~ 244 (396)
T TIGR00882 197 ----------------G--A--N-ASA-----------FSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTS 244 (396)
T ss_pred ----------------c--c--c-cCC-----------CCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 0 0 000 001235667788888776666555555566666677888777
Q ss_pred hhC---Cccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 014628 234 IYH---MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGEL 309 (421)
Q Consensus 234 ~~~---~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (421)
..+ .+.... ....+..+...++.+..+++.||+++| +.+.....+..+........++.+......++.+.
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~ 319 (396)
T TIGR00882 245 FFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVRIIGSSFATTALEVVILKMLHAF 319 (396)
T ss_pred hccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHH
Confidence 653 222222 233455567777888999999999998 66655555544444444445555555555555555
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHH-HHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
+..........+..+..+++.++++.+. .+.... +|+.++|.+.|++.|..| |...+.+.+++.++..+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~-lg~~~~~~l~G~l~~~~G-~~~~f~~~~~~~~i~~~ 389 (396)
T TIGR00882 320 EVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQ-LAMIFLSTLAGNMYDSIG-FQGAYLVLGCIVLLFTL 389 (396)
T ss_pred HHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHH-HHHHHHHHhHHHHHHhcc-cHHHHHHHHHHHHHHHH
Confidence 5444433444556666777777776666 444444 488999999999999876 77778777766554443
No 91
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.94 E-value=3.4e-25 Score=194.90 Aligned_cols=325 Identities=10% Similarity=0.022 Sum_probs=223.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.+|++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|+++|... +...++..|+|+++|+++
T Consensus 73 ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ra 151 (511)
T TIGR00806 73 YSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRA 151 (511)
T ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHH
Confidence 5789999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHH--HHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA--ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~--~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
.++...+..+|.++++++++. ...+|||+.+.+.- ..+...++++-+++|...+..--.++.+.. .....+.+..
T Consensus 152 tsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~--~~~~~~~~~~ 228 (511)
T TIGR00806 152 AAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVR--GALPCELDQM 228 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCCCCchhhhhccccccc--cccccccccC
Confidence 999999999999999999999 55679997665542 223334444444555322210000000000 0000000000
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
.+ ++. . +. ....+.......+..+.+++...++|.+....+-+.+...+++-+.+|....-++.....+
T Consensus 229 ~~----~~~-----~-~~-~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~ 297 (511)
T TIGR00806 229 VP----GPG-----G-KL-EDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLN 297 (511)
T ss_pred CC----CCc-----c-cc-chhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCcc
Confidence 00 000 0 00 0000011113345667788888899999888888888888888888877776655533221
Q ss_pred -chhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 240 -ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 240 -~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.....-++..+.+.+..+..|++-.+..+. ....+.+..++.+..++++...++.|...+...+.........+..
T Consensus 298 ~yNG~veA~~tllga~~a~~ag~~~~~w~~~---~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia 374 (511)
T TIGR00806 298 KYNGAVDAASTLLGAITSFIAGFVNIRWARW---SKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIA 374 (511)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhhcCCchhh---HHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 112233555566677788888874444221 0133444555556666777778899988888888888888888888
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHh
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
..-++.....+.-|...|+++...-.
T Consensus 375 ~~~iA~~L~~~~~aLvFGiNtfvAl~ 400 (511)
T TIGR00806 375 TFQIASSLSKELCALVFGINTFVATA 400 (511)
T ss_pred HHHHHHHhcccceEEEEecHHHHHHH
Confidence 88888888788889999998654444
No 92
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.94 E-value=1.3e-24 Score=200.88 Aligned_cols=343 Identities=13% Similarity=0.050 Sum_probs=204.3
Q ss_pred chhhHHHHhhhh-cCCchHHHHHHHHHHHHHhhhhhhhhHHH-HHHHHHHhhhhhhhhccchhhhhhccCCCC--CchhH
Q 014628 6 VASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVGEASFISLAAPFIDDNAPVP--QKTAW 81 (421)
Q Consensus 6 i~~~~~g~l~Dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~~~ 81 (421)
+..+++|+++|| +||||+++++.+++.++++.++++++... ++++|+++|+|.|...|...+++.|.+|++ +|+++
T Consensus 65 ~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~ 144 (489)
T PRK10207 65 GLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGA 144 (489)
T ss_pred HHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcc
Confidence 456789999999 99999999999999999999999877554 557999999999999999999999999887 45779
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccC-Cccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++++.+.++|..+||.+++++.++.|||+.|++.++ +++..++.+...++..++.+ ++++.+.+...........
T Consensus 145 ~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~l~~~~~-- 221 (489)
T PRK10207 145 FTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDIGSEPDHKPMSFSKLLLVLLGS-- 221 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhcccCCCCCccchhhhhHHHHHHHH--
Confidence 9999999999999999999999999999999999755 44444444444443322211 1101000000000000000
Q ss_pred CCcccccccchhhhhhhccccchh-------hhhhhhhhhhhhhHHhhcchhHHHHHHH--HHHHHHHHHHHHHHhhHHH
Q 014628 161 LNDHVSEDISDQASERSIKSIGES-------RFLNQLSQFSQDTKVLLQEKVYVVNVLG--YIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 231 (421)
..-...-....+........ ...-...+. ...++.+|+|.+....+. .......+....+.++.+.
T Consensus 222 ----~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~~~l~~~~~~f~~~~~q~~~~l~l~~ 296 (489)
T PRK10207 222 ----VVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVAFVLMLEAVVFYILYAQMPTSLNFFA 296 (489)
T ss_pred ----HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHH
Confidence 00000000000000000000 000000000 001134455554433322 2233333444446666666
Q ss_pred HHhhCCc-----cchhHHHhhhhHHHHHHhhhhhHHHhhhccccc--hhhHHHHHHHHHHHHHHHHH-----Hhh-----
Q 014628 232 YNIYHMS-----NADMMFGGVTIVCGIVGTISGGFILDQMGATIS--NAFKLLSAATFLGAISCLTA-----FCL----- 294 (421)
Q Consensus 232 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~-----~~~----- 294 (421)
++..+.+ .....+..+..+..++..++.+++.||+++|+. +....+..+.++....++.+ ...
T Consensus 297 ~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~~~~ 376 (489)
T PRK10207 297 INNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCSLGFLTAAAAGMWFADAQGL 376 (489)
T ss_pred HHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCc
Confidence 6432222 112233334445566777788899999988742 11112233333333222211 111
Q ss_pred hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+.+..+...++.+.+.....++....+.+..|++.++.++|+.+...+. |+.++..+....
T Consensus 377 ~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i-g~~lg~~l~~~~ 438 (489)
T PRK10207 377 TSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA-AFLLGGYVATFT 438 (489)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 23455666777888888899999999999999999999999999766555 777776555443
No 93
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.94 E-value=4.1e-24 Score=197.65 Aligned_cols=373 Identities=12% Similarity=0.017 Sum_probs=220.2
Q ss_pred cccchhhHHHHhhhh-cCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC---c
Q 014628 3 GLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ---K 78 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr-~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~---r 78 (421)
++.++++++|+++|| +|||+++.++.++.+++.++.+++++++.+++.|++.|+|.|...+...++++|++|+++ |
T Consensus 60 ~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r 139 (475)
T TIGR00924 60 LVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRR 139 (475)
T ss_pred HHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccc
Confidence 567889999999999 899999999999999999999999999999999999999999999999999999998764 8
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 158 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (421)
++++++++.+.++|.++||.+++++.+++|||+.|++.++..++.. +.++..++..++.++++++ ...++.......
T Consensus 140 ~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 216 (475)
T TIGR00924 140 DGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLRDIGSVPDP--LSGQGKTYGKLL 216 (475)
T ss_pred cceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccccCCCCCCC--cchhhhhhHHHH
Confidence 8899999999999999999999999998999999999886544443 3333333322211110000 000000000000
Q ss_pred ccCCcccccccchhhhhhhccccchhh-------hh---hhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhh
Q 014628 159 SNLNDHVSEDISDQASERSIKSIGESR-------FL---NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGP 228 (421)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (421)
..................+........ .. ....+...+..+..|...+..+.+...++...+....+.++
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~~~~~~Q~~s~l~ 296 (475)
T TIGR00924 217 LALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMYAYIVLFLEAVVFWVLYAQMPTSLN 296 (475)
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHHHHHHHHHHHHHHHHHHHHhhhHHH
Confidence 000000000000000000000000000 00 00000000000111222333344444455555555566677
Q ss_pred HHHHHhhCCcc-----chhHHHhhhhHHHHHHhhhhhHHHhhhccccc--hhhHHHHHHHHHHHHHHHHHHh--------
Q 014628 229 KAGYNIYHMSN-----ADMMFGGVTIVCGIVGTISGGFILDQMGATIS--NAFKLLSAATFLGAISCLTAFC-------- 293 (421)
Q Consensus 229 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-------- 293 (421)
.+.++..+.+. ....+.++..+..++..++..++..|..||.. +...-+..+.++.+.++.....
T Consensus 297 l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~~~G~~l~~~~~~~~~~~~~~~~~~ 376 (475)
T TIGR00924 297 FFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKFTLGMLFCGASFLTFAASIWFADAG 376 (475)
T ss_pred HHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 77666433321 12234455555555555554454445544311 1111123444444444333321
Q ss_pred -hhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHH
Q 014628 294 -LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 372 (421)
Q Consensus 294 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 372 (421)
..+.++.+...++.+.+.....+....+..+..|++.||+.+|+....... |..+++.+.....+..+ +...+...+
T Consensus 377 ~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~-g~~l~~~~~~~~~~~~~-~~~~~~~~~ 454 (475)
T TIGR00924 377 GLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM-GSLLGGYLATFGAVPQG-VTGVFGKIG 454 (475)
T ss_pred CccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccc-hhhHHHHHH
Confidence 246677778888889999999999999999999999999999999655544 88888877776666433 444444444
Q ss_pred HHHHHHHH
Q 014628 373 SIFFLAAG 380 (421)
Q Consensus 373 ~~~~~~~~ 380 (421)
...++..+
T Consensus 455 ~~~~~~~~ 462 (475)
T TIGR00924 455 LVTLLVGV 462 (475)
T ss_pred HHHHHHHH
Confidence 44443333
No 94
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.94 E-value=5.8e-24 Score=194.94 Aligned_cols=345 Identities=12% Similarity=0.064 Sum_probs=217.9
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.++..++.|+++|.||||.+++.+.++..+|+++++.++|...++++..+.|+|.|... .....++|..|.|.|...
T Consensus 89 l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~ 167 (599)
T PF06609_consen 89 LASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLG 167 (599)
T ss_pred HHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhH
Confidence 4567889999999999999999999999999999999999999999999999999987665 456668999999999988
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhc-ccccccccCCccccchhhhhhcccccccc-
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEAS- 159 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~- 159 (421)
.++......+....++.++..+..+.+|||.|++..+...+..++.+++ .|.+.+..+.++..++. ...+++..
T Consensus 168 ~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~~~~~~~~s~~~----~l~~lD~IG 243 (599)
T PF06609_consen 168 LAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRAQLHGRKLSKRE----QLKELDWIG 243 (599)
T ss_pred hHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchhhhccccCcHHH----HHHHhhHHH
Confidence 8877776666666788888777777799999999988776655544433 34322111111111110 00111000
Q ss_pred ------------------cC--Ccccccccchhhhhhhccccchhhhhhhh---hhhhhhhHHhhcc-hhHHHHHHHHHH
Q 014628 160 ------------------NL--NDHVSEDISDQASERSIKSIGESRFLNQL---SQFSQDTKVLLQE-KVYVVNVLGYIA 215 (421)
Q Consensus 160 ------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~ 215 (421)
.. ......+.-...-.--- --.---.++.+ ++..- ..+++++ |.+...++..++
T Consensus 244 ~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~-~Lv~F~~wE~~~~~~~Pl~-P~~Lf~~~r~~~~~lvi~fi 321 (599)
T PF06609_consen 244 IFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV-LLVAFVVWEWFGAPKDPLF-PHRLFKDRRGFAALLVISFI 321 (599)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH-HHHHHHHhhhhccCCCCcC-CHHHhccchHHHHHHHHHHH
Confidence 00 00000000000000000 00000000000 11122 2356676 556666666677
Q ss_pred HHHHHHHHHHHhhHHHHHhhCCccc----hhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHH
Q 014628 216 YNFVIGAYSYWGPKAGYNIYHMSNA----DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 291 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (421)
....++....+.|......++.++. ..........+..++.++.+.+..+++|-+ ..++.+..+..+.+..+
T Consensus 322 ~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~K----w~li~~~~~~ta~~Gam 397 (599)
T PF06609_consen 322 SGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIK----WQLIFGSVLMTAFCGAM 397 (599)
T ss_pred HHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchh----HHHHHHHHHHHHHHHHH
Confidence 7777888888888888877766642 123345566777788888899988887542 33333333333332222
Q ss_pred --HhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 292 --FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 292 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
.-.++....+...++.+++.+....+.....+-..|+++.+++.|+. ...+.+|+.+|..+...+.
T Consensus 398 a~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~-~s~R~~GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 398 AAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLT-GSIRSIGGSIGYAIYNAIF 465 (599)
T ss_pred HHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHH-HHHHHHhhHHHHHHHHHHH
Confidence 22334444556677778888777777777777788999999999999 4555557777766664443
No 95
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.93 E-value=1.1e-23 Score=176.30 Aligned_cols=319 Identities=13% Similarity=0.054 Sum_probs=241.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
+...+.+++..+++.|+|.++.+..++++.+++.++-... +.+.++.+-.+.|.|.+......+++|.+.+|+| -+..
T Consensus 58 l~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~m 135 (395)
T COG2807 58 LAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLM 135 (395)
T ss_pred HHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhH
Confidence 3566788999999999999999999999999999998887 7888899999999999999999999999999876 8999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcc-hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
+++|....++|..+++.+.-.+.++. |||......+.++++..+.++ |...+.+....+.+.
T Consensus 136 tglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl---Pq~~r~~~~~~~~~~-------------- 198 (395)
T COG2807 136 TGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL---PQALREQAASIATKL-------------- 198 (395)
T ss_pred HhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh---hhccccccccccccc--------------
Confidence 99999999999999999999998887 799999999988777666554 442221101111000
Q ss_pred CCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccc
Q 014628 161 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (421)
.+...++|+|.-|.+.+.+.+.+..+|....|+|.++.|.+-.+.+
T Consensus 199 ----------------------------------~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~G~sa~~ 244 (395)
T COG2807 199 ----------------------------------VSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDRGLSAAE 244 (395)
T ss_pred ----------------------------------ccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHH
Confidence 1223577999999999999999999999999999999996544444
Q ss_pred hhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHhccCch
Q 014628 241 DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
+..+.++..+.+++..+....+.+|...++ ...+....+..+..+-+.+.+ .++.+ ..+.|++.+..++..
T Consensus 245 aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~la 317 (395)
T COG2807 245 AGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLVVLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLA 317 (395)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHHHHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHH
Confidence 446667888899999999999999854442 333333333333333222222 22222 466677777777777
Q ss_pred hhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHH
Q 014628 319 NYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 319 ~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 381 (421)
...+.+..++ +..++-.|+.+...+.+. ..||.++|++.|..|+|...+.....+.+...+.
T Consensus 318 L~li~~rs~~a~~Aa~LSgmaQg~GYllA-a~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~ 380 (395)
T COG2807 318 LTLILLRSSDAAIAAALSGMAQGVGYLLA-AFGPWLFGFLHDATGSWSAPLVLLALATLLMLIF 380 (395)
T ss_pred HHHHHhhcCChHHHHHHHHHhhhhhHHHH-hhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 7777666554 667777788776666644 6699999999999999988777766655444433
No 96
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.92 E-value=1.4e-22 Score=184.31 Aligned_cols=316 Identities=11% Similarity=-0.038 Sum_probs=206.2
Q ss_pred chhhHH-HHhhhhcCCchHHHHHHHHH-HHHHhhhh---hhhh-HHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 6 VASPIF-ASLAKSHNPFRLIGVGLSVW-TFATAGCG---SSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 6 i~~~~~-g~l~Dr~Grr~~~~~~~~~~-~~~~~~~~---~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
+.+|++ ++..||+||||..++.+.+. .......+ ...+ ...++..-++.++..+...+...++..|..++++++
T Consensus 53 l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~ 132 (390)
T TIGR02718 53 LWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLA 132 (390)
T ss_pred HHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhh
Confidence 345555 44677789999875555332 21121111 2222 334445556666777777788888888999888889
Q ss_pred hHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccc
Q 014628 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 159 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (421)
...+....+..+|.++|+...+++.++.|||..|++.+++.++..+..++..|+.+++ +++++ .
T Consensus 133 ~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~-~------------ 196 (390)
T TIGR02718 133 KGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCVLWLKDRAVAS---PEAPL-A------------ 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCCCcCc---cccch-h------------
Confidence 8999999999999999999999999999999999999988777666655554331100 00000 0
Q ss_pred cCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 160 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
...+.++++|+|.++......++..........+.+.|++| .+.++
T Consensus 197 ---------------------------------~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~ 242 (390)
T TIGR02718 197 ---------------------------------RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPL 242 (390)
T ss_pred ---------------------------------hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCH
Confidence 01235567788888777776677777677777788888887 47776
Q ss_pred chhHHH-hhhh-HHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh------hhhHHHHHHHHHHHHHH
Q 014628 240 ADMMFG-GVTI-VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLALFTVGELLV 311 (421)
Q Consensus 240 ~~~~~~-~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 311 (421)
...... .... ...+++.++.|++.||++++ +.+..+..+.....+..... .+.........+.++..
T Consensus 243 ~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (390)
T TIGR02718 243 EWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW-----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLIT 317 (390)
T ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHH
Confidence 554332 3333 45667788999999999987 55554443332222211111 11222222233334445
Q ss_pred HhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 312 FATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
+...+.......+..++ +.+++.+++.+...+. |..++|.+.|.+.|..| +...+...+.+.+++
T Consensus 318 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a 383 (390)
T TIGR02718 318 GITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLA 383 (390)
T ss_pred HHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHH
Confidence 55656666676677766 8899999999777666 99999999999999876 666666665554443
No 97
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=6.2e-22 Score=180.59 Aligned_cols=337 Identities=15% Similarity=0.157 Sum_probs=252.7
Q ss_pred ccchhhHHHHhhhhcCCchHH-HHHHHHHHHHHhhhhhh-h-hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc--
Q 014628 4 LLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK-- 78 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r-- 78 (421)
.++..|+.|.++|+-|+||.+ .+..++..+++.+..+. + +++...+.-++.-++.+.......+++.|..+++++
T Consensus 83 ~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~~~ 162 (477)
T PF11700_consen 83 QALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPRVR 162 (477)
T ss_pred HHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChhhh
Confidence 456789999999999877764 44555555666666663 3 344444555555667777788889999999999888
Q ss_pred ------------------------hhHHHHHHHHHHHHhhhHHHhHHhhhh--------cchhHHHHHHHHHHHHHHHHH
Q 014628 79 ------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAFWGEAILMLPFAVL 126 (421)
Q Consensus 79 ------------------------~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~~wr~~f~~~~~~~~~~~~~ 126 (421)
++..+.-.....+|.++.-.+.-.+.. ..+-|..+.+.++.-++..+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~~~~a~ww~vfsiP 242 (477)
T PF11700_consen 163 AAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAFLIVALWWLVFSIP 242 (477)
T ss_pred hhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHHHHHHHHHHHHHHH
Confidence 899998888888888887776655431 234588899998888888888
Q ss_pred HHhcccccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhH
Q 014628 127 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 206 (421)
Q Consensus 127 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (421)
.++..|+.++.+..++..+. ....+++.++.++++.+.|..
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~---------------------------------------~~~g~~~l~~t~k~~~~~~~~ 283 (477)
T PF11700_consen 243 LFLWLPDRPGPRPLPSGSSY---------------------------------------LRFGFKRLWRTFKEIRKLRQL 283 (477)
T ss_pred HHHhCCCCCCCCCCCcchhH---------------------------------------HHHHHHHHHHHHHHHHhChHH
Confidence 88877765432111111110 114556667788888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
...+++++++.-+...+......|..+..+++..+. .+..+..+.+++|.++.+++.||+|.|.. +.+........
T Consensus 284 ~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~---~~l~~~l~~~~ 360 (477)
T PF11700_consen 284 FLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK---RTLLISLILWI 360 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh---HHHHHHHHHHH
Confidence 999999999999999999999999999999997666 44466779999999999999999998743 23333333332
Q ss_pred HHHHHHHh--------hhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 286 ISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 286 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
+..+.... .++.+.+.+...+.|.+.+..++..-++..+..|+++.+...|++...... .+.+||.+.|.+
T Consensus 361 ~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~-ss~lGPll~g~i 439 (477)
T PF11700_consen 361 IIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA-SSWLGPLLFGLI 439 (477)
T ss_pred HHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 22222222 456677777888899999999999999999999999999999999655555 889999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHH
Q 014628 358 QDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+..|+.+.++....++.+++.+++.
T Consensus 440 ~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 440 TDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 99999888888888877777766654
No 98
>PTZ00207 hypothetical protein; Provisional
Probab=99.91 E-value=7.5e-23 Score=188.98 Aligned_cols=372 Identities=11% Similarity=-0.011 Sum_probs=233.9
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh------hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
+++++.|++.||+|||+++.++.+++.++.++++++ ++++.+++.|++.|+|.+...+.....+.+|+| ++||
T Consensus 76 ~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG 154 (591)
T PTZ00207 76 YFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVFP-SNRG 154 (591)
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCh-hhhH
Confidence 466789999999999999999999999999999997 689999999999999999999999999999997 6799
Q ss_pred hHHHHHHHHHHHHhhh-HHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccc--ccc-CCc--cccchhhhh---
Q 014628 80 AWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL--KGF-APA--ESGKAQVVA--- 150 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~-g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~--~~~-~~~--~~~~~~~~~--- 150 (421)
++.++...+.++|.++ +++..+++. .+|+..|++.+++.++..++.+.+.++.+ ++. ++. ++++....+
T Consensus 155 ~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~~vr~p~~~~~~~~~~~~~~~~~~~~~~~~ 232 (591)
T PTZ00207 155 AVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIVFMRLPPFHLTGYQEKHLDEEEKAQRLMRK 232 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHhheeCCcchhhcccccCCCHHHHHHHhhhh
Confidence 9999999999999976 555555554 36999999999998888877777663322 211 110 000000000
Q ss_pred -----h-----cc---------------------------------------------c-------ccccccCCcccccc
Q 014628 151 -----S-----VS---------------------------------------------E-------GSEASNLNDHVSED 168 (421)
Q Consensus 151 -----~-----~~---------------------------------------------~-------~~~~~~~~~~~~~~ 168 (421)
+ .. . ..+...++++.+.+
T Consensus 233 ~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~~lll~~p~l~ip~~~~~~~~~~~~~~~~ 312 (591)
T PTZ00207 233 GVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVIVLTVIFPFMAFPLTTFDGKRPHDDSDGK 312 (591)
T ss_pred hhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCcCCCcccc
Confidence 0 00 0 00000000000000
Q ss_pred cchhhh--hhhccccc---hhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCC-ccc--
Q 014628 169 ISDQAS--ERSIKSIG---ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM-SNA-- 240 (421)
Q Consensus 169 ~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 240 (421)
..+..+ .+..+.+. ....+....+..+++.+.+++..+|.+....++.......+..++.++.+...+. ...
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~cg~g~gl~~~~N~~qI~~sl~g~~~~~~~ 392 (591)
T PTZ00207 313 AKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFCCVGAHFVIIFNARFIYTALAGEAPDDAL 392 (591)
T ss_pred ccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHHhhCchheeeecHHHHHHHhcCCCCCccc
Confidence 000000 00000000 0000001011123677778899999999988888777777777888888887455 222
Q ss_pred hhHHHhhhhHHHHHHhhhhhHHHhhhccccc---hhhHH-HHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccC
Q 014628 241 DMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKL-LSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (421)
...+.++.++.+.+|++..|++.....+|.. -.+.. +....+ ..+..+++...-+...+.+..++.+++.+..++
T Consensus 393 ~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~lll~~~~p~~~L~~~~~lvg~~~G~~~~ 471 (591)
T PTZ00207 393 NTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITMLTLFLTLPKAALPLPYFIAAFANGFMAA 471 (591)
T ss_pred eeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHHHHHHHHCCccHhHHHHHHHHHHhhHhHH
Confidence 2236688889999999999998843333321 11122 222233 333333333222224667788888999999999
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCc-chhHHHhhhccc------------cchhhhHHHHHHHHHHHHHHH
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN------------NWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~~g------------~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.....+.|.+. ++-|+-.-+.. ...-+|..+- -.++|.++|+-. -+..+|++++++.+.+.+...
T Consensus 472 ~~~~i~selFg-k~~g~~yN~~~-~a~pigs~~~n~~l~G~~Yd~ea~k~~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~ 549 (591)
T PTZ00207 472 TIALVTRTIFA-KDPAKHYNFCF-LGSVLSAIFLNRLLYGEWYTQQADKLGQDVCTERVCVVMPLAFLLGLSFLAFITST 549 (591)
T ss_pred HHHHHHHHHhc-cchHHHhhHHh-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCeeCCceeeHhHHHHHHHHHHHHHHHHh
Confidence 99999999988 77777766663 3333344432 446677776532 145677777777666665543
No 99
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.91 E-value=1.4e-21 Score=181.86 Aligned_cols=333 Identities=12% Similarity=0.015 Sum_probs=187.8
Q ss_pred hhhHHHHhhhh-cCCchHHHHHHHHHHHHHhhhhhhh-hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC--chhHH
Q 014628 7 ASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ--KTAWL 82 (421)
Q Consensus 7 ~~~~~g~l~Dr-~Grr~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~~~ 82 (421)
..+++|+++|| +|||+++..+.++.+++..++++++ +.+.+++.|+++|++.|...+...+++.|++|+++ |+.++
T Consensus 73 ~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~ 152 (500)
T PRK09584 73 LVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAF 152 (500)
T ss_pred HHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcc
Confidence 34689999999 5999999999999999999998875 56677789999999999999999999999998654 45688
Q ss_pred HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccC-Cccccchhhhhhcc--------
Q 014628 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA-PAESGKAQVVASVS-------- 153 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~-------- 153 (421)
++++.+.++|..+||.+++++.+++|||+.|++.++..++..+..++. ++..++.. ++++++.+......
T Consensus 153 ~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (500)
T PRK09584 153 TMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFC-QRWVKQYGSKPDFEPINYRKLLLTIVGVVAL 231 (500)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-HHHhccCCCCCCccccchhhHHHHHHHHHHH
Confidence 999999999999999999999999999999999876544443332222 11111110 01100000000000
Q ss_pred -cccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHH
Q 014628 154 -EGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGY 232 (421)
Q Consensus 154 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (421)
........+.+ . ......... ........++. ...++.-++|.+.. +. .+.....++......|.++.
T Consensus 232 ~~~~~~~~~~~~---~-~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-~~~~~i~f~~~~~q~~~~l~ 300 (500)
T PRK09584 232 IAIATWLLHNQE---I-ARMALGVVA----LGIVVIFGKEA-FAMKGAARRKMIVA-FI-LMLEAIIFFVLYSQMPTSLN 300 (500)
T ss_pred HHHHHHHHhcch---H-HHHHHHHHH----HHHHHHHHHHH-hhcCHHHHHHHHHH-HH-HHHHHHHHHHHHHHhccHHH
Confidence 00000000000 0 000000000 00000000000 00011112222222 21 12223333344444444433
Q ss_pred H----hh-----CCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhh-------
Q 014628 233 N----IY-----HMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS------- 296 (421)
Q Consensus 233 ~----~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 296 (421)
. .. +.......+.++..+..++..++..++-+|.++|.... ..+..+.++.+++++.+....+
T Consensus 301 ~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~-~~~~~G~~l~~l~f~~l~~~~~~~~~~~~ 379 (500)
T PRK09584 301 FFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMP-HKFAIGMVLCSGAFLVLPLGAKFANDAGI 379 (500)
T ss_pred HHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 2 11 11111223344555555666666666667766653322 3344444444444444332222
Q ss_pred --hHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchh
Q 014628 297 --LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 297 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
.+..+...++.+++.....|....++.+..|++.||+.+|+...... +|..++..+
T Consensus 380 vs~~~~~~~~~l~~~ge~~~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a-~g~~~~g~~ 437 (500)
T PRK09584 380 VSVNWLIASYGLQSIGELMISGLGLAMVAQLVPQRLMGFIMGSWFLTTA-GAALIAGYV 437 (500)
T ss_pred cCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCcHHHHHHHHHHHHHHHH-HHHHHHHHH
Confidence 34566777788888888899999999999999999999998743332 244444333
No 100
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=2.7e-21 Score=168.61 Aligned_cols=275 Identities=13% Similarity=0.096 Sum_probs=196.6
Q ss_pred hhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhc------------
Q 014628 39 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 106 (421)
Q Consensus 39 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------------ 106 (421)
+...+|+.+++.-++.|.|.+...+....++++..++|++.+.+++.+.+.++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 45678999999999999999999999999999999999999999999999999999999999987731
Q ss_pred ----chhHHHHHHHHHHHHHHHHHHHhcc-cccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhcccc
Q 014628 107 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 181 (421)
Q Consensus 107 ----~~wr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (421)
.+|+++|++.+.+.++..+...+.. ||..+ ++.+.. .+ ++.
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~----------------------~~------~~~- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARV----------------------SS------GDT- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----cccccc----------------------cc------ccc-
Confidence 4799999977776555555443332 33110 000000 00 000
Q ss_pred chhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh--hCCccchh-HHHhhhhHHHHHHhhh
Q 014628 182 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 258 (421)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 258 (421)
...+..+++|.++...+..+++.....+...|.+.|+.+. ++.++... ...+....+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0011345677777777777777778889999999999864 46665444 4457777888999999
Q ss_pred hhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHH
Q 014628 259 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 338 (421)
Q Consensus 259 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 338 (421)
++++.||++++ +.+..+..++.+..++....++.. ......+.+++.+..+|...+...+..|+ +.+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 555555544444443333333322 23355567788888889888888888765 356667775
Q ss_pred HHHHHhhcccCcchhHHHhhhccccchhhhHH
Q 014628 339 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 339 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 370 (421)
.. ..+|+.+.|.+.|.+.|..| .+.++++
T Consensus 271 -~~-~~~Gg~i~P~l~G~lad~~g-~~~a~~v 299 (310)
T TIGR01272 271 -CL-AIVGGAIVPLLQGSLADCLG-IQLAFAL 299 (310)
T ss_pred -HH-HHhcchHHHHHHHHHHHhcc-chHHHHH
Confidence 34 44589999999999999876 5555553
No 101
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.90 E-value=5.1e-21 Score=176.68 Aligned_cols=336 Identities=20% Similarity=0.355 Sum_probs=253.8
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh--------------------h-------------------
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------------F------------------- 42 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~--------------------~------------------- 42 (421)
+|..+...+..+.+-|.-|-|++-+|+++.+++++++++- +
T Consensus 143 ig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~ 222 (735)
T KOG3626|consen 143 IGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPS 222 (735)
T ss_pred cchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCC
Confidence 4567788899999999999999999999999999998763 0
Q ss_pred ----------h--HH-HHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcc--
Q 014628 43 ----------D--FW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-- 107 (421)
Q Consensus 43 ----------~--~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-- 107 (421)
+ ++ .++++.++.|+|....++.+.+|+-|...+++-...+|+......+|.++|.++++++...+
T Consensus 223 ~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD 302 (735)
T KOG3626|consen 223 PENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVD 302 (735)
T ss_pred CCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeec
Confidence 0 22 56679999999999999999999999999999999999999999999999999999886421
Q ss_pred -----------------hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCcccccccc
Q 014628 108 -----------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDIS 170 (421)
Q Consensus 108 -----------------~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (421)
-|..-|++.+.+.+..++..+++ |+..+...++.+.+.. +..+
T Consensus 303 ~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~f-Pk~lp~~~~~~~~~~~-------------------~~~k 362 (735)
T KOG3626|consen 303 FGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFF-PKELPKSQKRKRARDL-------------------HVLK 362 (735)
T ss_pred cccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhC-cccCccccccchhhhh-------------------cccc
Confidence 27788888888888877777666 5443321111000000 0000
Q ss_pred hhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh--HHHhhh
Q 014628 171 DQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVT 248 (421)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 248 (421)
++.. ..+......+..+++.+..+++++||.+....++..+....+.++.+|+|.|++.+++.++..+ ..+.+.
T Consensus 363 ~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~ 438 (735)
T KOG3626|consen 363 TESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIG 438 (735)
T ss_pred cccc----cccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhh
Confidence 0000 1111122224567788889999999999999999999999999999999999999999986544 333455
Q ss_pred hHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh-----------------------------------
Q 014628 249 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC----------------------------------- 293 (421)
Q Consensus 249 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------- 293 (421)
..+..+|.+++|++.+|+.-+.+...++.++..++..++....++
T Consensus 439 vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C 518 (735)
T KOG3626|consen 439 VPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLSLLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDC 518 (735)
T ss_pred hhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHHHHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCC
Confidence 566688999999999999876544444555555555544333332
Q ss_pred --------------------------------------------hh--------------------hhHHHHHHHHHHHH
Q 014628 294 --------------------------------------------LS--------------------SLYGFLALFTVGEL 309 (421)
Q Consensus 294 --------------------------------------------~~--------------------~~~~~~~~~~~~~~ 309 (421)
.+ ....+++.+++..+
T Consensus 519 ~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf 598 (735)
T KOG3626|consen 519 SCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGNTIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSF 598 (735)
T ss_pred CCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCceeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHH
Confidence 00 12345566666777
Q ss_pred HHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 310 LVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
..+...++.+.++.+.+++|+|+.++|+..+..+.+|.+-+|+++|++.|..
T Consensus 599 ~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 599 IGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGAVIDTT 650 (735)
T ss_pred HHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhhhHhhH
Confidence 7778888899999999999999999999999999999999999999999965
No 102
>PRK09669 putative symporter YagG; Provisional
Probab=99.89 E-value=3.9e-21 Score=177.58 Aligned_cols=305 Identities=12% Similarity=0.059 Sum_probs=196.3
Q ss_pred ccchhhHHHHhhhh----cCCc-hHHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhcc
Q 014628 4 LLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr----~Grr-~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
.++..|+.|+++|| +||| +.++.+.+..+++.++....++ +..+++.-++.+.+.........++.+|+
T Consensus 58 dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~ 137 (444)
T PRK09669 58 DAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAI 137 (444)
T ss_pred HHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHh
Confidence 45778999999999 7774 5566777777777665544432 45566666777777777777788999998
Q ss_pred C-CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh-------cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCcccc
Q 014628 73 A-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 144 (421)
Q Consensus 73 ~-~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 144 (421)
. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.+++.++..+..++..+|.... ++++
T Consensus 138 t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~~~~~~~~~~e~~~~---~~~~ 214 (444)
T PRK09669 138 TNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVLFFCCFFMTKERYTP---EVDN 214 (444)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHhCCeEEecCC---CCcC
Confidence 8 55789999899888888888887765544332 34789888888887776666555554442111 0000
Q ss_pred chhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHH
Q 014628 145 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS 224 (421)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (421)
+ .+..++++.+++||.++......++.........
T Consensus 215 ~---------------------------------------------~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~ 249 (444)
T PRK09669 215 S---------------------------------------------SSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRG 249 (444)
T ss_pred C---------------------------------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHh
Confidence 0 0112457778899998887776665545444433
Q ss_pred HHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH-HHH-hhhhhHHHHH
Q 014628 225 YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-CLSSLYGFLA 302 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~ 302 (421)
...+.|.+...+.+.....+.....+..+++.++.+++.||+++| +.............. ... ..++.+...+
T Consensus 250 ~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (444)
T PRK09669 250 GATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWTIVAFVILSALIFFIPPSNVWLIFA 324 (444)
T ss_pred hhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHhCcchHHHHHH
Confidence 433333333333222222333444566778888999999999987 555444433332222 222 2345555566
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCC-------chhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
..++.+++.+...+...+++.|.++. +..|...|..+..... |..+++.+.|.+.+..|
T Consensus 325 ~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~alg~~i~g~ll~~~G 390 (444)
T PRK09669 325 LNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GLAIGGAVVGWILAWVD 390 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 66677777777777778888877642 2345667777555555 88999999999988765
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.88 E-value=8e-21 Score=176.57 Aligned_cols=309 Identities=7% Similarity=-0.024 Sum_probs=195.7
Q ss_pred cchhhHHHHhhh----hcCC-chHHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 5 LVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~i~~~~~g~l~D----r~Gr-r~~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++..|+.|+++| |+|| |+.++++.+..+++..++-..++ +..+++.-++.+++.....+...+++.|..
T Consensus 56 ai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt 135 (473)
T PRK10429 56 AINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLT 135 (473)
T ss_pred HHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhC
Confidence 467788999999 6698 55677788777777655543321 334555666778888888888999999998
Q ss_pred -CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh-------cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc
Q 014628 74 -PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 -~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+++||.+..++-..+.++|..+.+.+...+.+ ..+|+....+.+++.++..+..++..||...... ++.+
T Consensus 136 ~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~e~~~~~~--~~~~ 213 (473)
T PRK10429 136 LDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVSTIITLRNVHEVYSSDN--QVSA 213 (473)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCceecCCccc--cccc
Confidence 58899999998777777776666555443321 2357877777777766655555554455211100 0000
Q ss_pred hhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014628 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
.. +..+..+.++.+++||.++..+...++..........
T Consensus 214 ~~-----------------------------------------~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~ 252 (473)
T PRK10429 214 EG-----------------------------------------SHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIING 252 (473)
T ss_pred cc-----------------------------------------cCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhh
Confidence 00 0001123456677898888877777777666666666
Q ss_pred HhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-----hhhhhHHH
Q 014628 226 WGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLSSLYGF 300 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 300 (421)
+.+.|.+...+.+.....+.....+..+++.++.+++.||+|+| +.+..+..+..+..+... ..++.+..
T Consensus 253 ~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 327 (473)
T PRK10429 253 FAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGASIFPVLSCGVLLLMGLAAPHNALLI 327 (473)
T ss_pred heeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHhccCchhHHHH
Confidence 66655554444322222333445577788889999999999998 555544444333222221 12334444
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccC-------CchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
++...+.+.+.+...+...+++.|.++ .+..|...|..+..... |..+++.+.|++.+..|
T Consensus 328 ~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-~~al~~~i~g~~l~~~G 395 (473)
T PRK10429 328 VIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-GSAFAAFFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 455555666666666767777887755 23455677887544444 88899999999988665
No 104
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.88 E-value=1.1e-19 Score=164.83 Aligned_cols=342 Identities=13% Similarity=0.038 Sum_probs=219.1
Q ss_pred cccchhhHHHHhhh----hcCCchHHHHH-HHHHHHHHhhhhhhhhHH-----------------HHHHHHHHhhhhhhh
Q 014628 3 GLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW-----------------SIAICRMLVGVGEAS 60 (421)
Q Consensus 3 g~~i~~~~~g~l~D----r~Grr~~~~~~-~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~ 60 (421)
..++.+|+.|+++| |+||||.++++ .....++.++.+++++.. .++++-.+..++...
T Consensus 51 ~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~ 130 (477)
T TIGR01301 51 SGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNM 130 (477)
T ss_pred HHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHH
Confidence 34678899999999 59999998774 666666667777776643 222233344457777
Q ss_pred hccchhhhhhccCCCCCc--hhHHHHHHHHHHHHhhhHHHhHHhh--hhcc-------------hhHHHHHHHHHHHHHH
Q 014628 61 FISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSHL-------------NWRYAFWGEAILMLPF 123 (421)
Q Consensus 61 ~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~~~~~l--~~~~-------------~wr~~f~~~~~~~~~~ 123 (421)
..+...++++|.+|+++| +.+.++.+...++|.++|+.++++. .+.+ +.|..|++.++..++.
T Consensus 131 ~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~ 210 (477)
T TIGR01301 131 LQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAIL 210 (477)
T ss_pred HHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHH
Confidence 888899999999998865 5799999999999999999999875 2211 5789999998888887
Q ss_pred HHHHHhcccccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcc
Q 014628 124 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 203 (421)
Q Consensus 124 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (421)
.++..+..+|.+... +++.+.. +. ++. ++.+ ....+++.++.++++ .
T Consensus 211 ~l~t~~~v~E~~~~~--~~~~~~~-------~~-------------~~~--~~~~-------~~~~~~~i~~~~~~m--P 257 (477)
T TIGR01301 211 TYIALSAVKENPLIG--SDDFINS-------EA-------------APP--SKHG-------EEAFFGELFGAFKYL--P 257 (477)
T ss_pred HHHHeeeeeccCCCc--cccchhh-------hc-------------ccc--cccc-------hhhhHHHHHHHHHHC--C
Confidence 777777777754211 1100000 00 000 0000 001223334444432 4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHH-HhhCCcc-------ch---h-HHHhhhhHHHHHHhhhhhHHHhhhccccc
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGY-NIYHMSN-------AD---M-MFGGVTIVCGIVGTISGGFILDQMGATIS 271 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-------~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 271 (421)
+.++.+++..++...+.+.+..|.+.+.. +.++.++ .. . .-..+..+...+.+++..++.+|+|+|+
T Consensus 258 ~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k- 336 (477)
T TIGR01301 258 RPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGK- 336 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccch-
Confidence 67788888888888888888888887765 4554332 11 1 1113334444556666777888887531
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhhh---------------------hHHHHHHHHHHHHHHHhccCchhhhhhcccCC--
Q 014628 272 NAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-- 328 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 328 (421)
.....+.++.+.++....+.++ .+..++.+.+.|+.....+..-++++.+..++
T Consensus 337 ---~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal~s~~~~~~~ 413 (477)
T TIGR01301 337 ---RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFALASIRSSNLG 413 (477)
T ss_pred ---hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHHHHHHccccC
Confidence 3434444444444433332221 25566777778888888888889999999985
Q ss_pred chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccch-hhhHHHHHHHHHHHHHH
Q 014628 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR-KTTLALTSIFFLAAGIW 382 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~-~~~~~~~~~~~~~~~~~ 382 (421)
+..|..+|+.|.+... .+++.....|.+.+..|+.. ..+.+.++.++++++..
T Consensus 414 ~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~ 467 (477)
T TIGR01301 414 AGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLA 467 (477)
T ss_pred CCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHH
Confidence 4669999999988777 88887777777666666433 34444444444444433
No 105
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.87 E-value=2.9e-19 Score=162.77 Aligned_cols=125 Identities=14% Similarity=0.127 Sum_probs=100.6
Q ss_pred ccchhhHHHHhhhhc-CCchHHHHHHHHHHHHHhhhhhhhh-HHHHHHHHHHhhhhhhhhccchhhhhhccCCCC--Cch
Q 014628 4 LLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP--QKT 79 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~-Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~r~ 79 (421)
..++++++|+++||+ ||||+++++.++..++.++.+..++ ...+.+...+.++|.|...+...++++|.+|++ +|.
T Consensus 58 ~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~ 137 (493)
T PRK15462 58 VYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRD 137 (493)
T ss_pred HHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCcccc
Confidence 456788999999999 9999999999999999887765432 233444455555677777788889999999875 699
Q ss_pred hHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHh
Q 014628 80 AWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 129 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 129 (421)
+++++.+.+.++|..++|.+.+++.+.+|||+.|.+.++.. +.+++.++
T Consensus 138 sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm-~l~li~~~ 186 (493)
T PRK15462 138 GGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGM-IAGLVIFL 186 (493)
T ss_pred ceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHH-HHHHHHHH
Confidence 99999999999999999999999999999999999976643 44444433
No 106
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.87 E-value=2.4e-20 Score=171.50 Aligned_cols=306 Identities=16% Similarity=0.152 Sum_probs=229.1
Q ss_pred cchhhHHHHhhh----hcCCchH-HHHHHHHHHHHHhhhhhh-h-------hHHHHHHHHHHhhhhhhhhccchhhhhhc
Q 014628 5 LVASPIFASLAK----SHNPFRL-IGVGLSVWTFATAGCGSS-F-------DFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 5 ~i~~~~~g~l~D----r~Grr~~-~~~~~~~~~~~~~~~~~~-~-------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
++..|+.|.++| |+||||. ++++....+++.+++... + ....+.+.-++..++.........++..|
T Consensus 51 ai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~ 130 (428)
T PF13347_consen 51 AITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPE 130 (428)
T ss_pred hhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCcc
Confidence 466789999999 8997775 567878888877777655 4 22345667777789999999999999999
Q ss_pred cCC-CCCchhHHHHHHHHHHHHhhhHHHhHHhhhhc-------chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccc
Q 014628 72 NAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 143 (421)
Q Consensus 72 ~~~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 143 (421)
..+ +++|.+..+.-..+..+|..+...+.+.+.+. .+|++..++.+++.++..++.++..+|..+.. +++
T Consensus 131 lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke~~~~~--~~~ 208 (428)
T PF13347_consen 131 LTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGLVFFLITFFFVKERSVEV--TEQ 208 (428)
T ss_pred ccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHHHHhhhhhheeeeccccc--ccc
Confidence 997 57899999999999999987666666655532 16999999999988888887777766611110 000
Q ss_pred cchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHH
Q 014628 144 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (421)
.+ ..+..+.++.+++||.++......++........
T Consensus 209 ~~--------------------------------------------~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~ 244 (428)
T PF13347_consen 209 EK--------------------------------------------KISLRDSLRSLFRNRPFRILLLAFFLQWLAFALM 244 (428)
T ss_pred cc--------------------------------------------ccccccchhhhcccchHHHHHHHHHHHHhhhhhh
Confidence 00 0111345778889999998888888887777777
Q ss_pred HHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHHH
Q 014628 224 SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFL 301 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 301 (421)
....+.|.++..+.+.....+..+..+..+++.++.++++||+|+| +.+..+..+.+...+.....+ +.+...
T Consensus 245 ~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (428)
T PF13347_consen 245 NTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYIIGLLLAALGFLLLFFLGPGSPWLVL 319 (428)
T ss_pred hhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehhhhHHHHHHHHHHHHHHHhhhHHHHH
Confidence 7778888888777775444555667788899999999999999999 666666666666655555444 778888
Q ss_pred HHHHHHHHHHHhccCchhhhhhcccCC-------chhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 302 ALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+...+.+.+.+..+....++..|..+. +..|...|+.+..... +..+++.+.+.+.+..|
T Consensus 320 i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~-~~~la~~i~g~~l~~~G 386 (428)
T PF13347_consen 320 ILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI-GQGLAGAIVGLLLALVG 386 (428)
T ss_pred HHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-HHHHHHHHHHHHHHHhC
Confidence 888888999888888888888888763 3458888888655555 88888888888877654
No 107
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.87 E-value=1.2e-19 Score=162.76 Aligned_cols=307 Identities=19% Similarity=0.145 Sum_probs=215.6
Q ss_pred cccchhhHHHHhhhhcC-CchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 3 GLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~G-rr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
..+++++++|.++||++ +||++.+..++.++........++++.+++.-++..+......|...++..++.. +++.-
T Consensus 49 ~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~~p~~pl~dsi~~~~~~--~~~~~ 126 (400)
T PF03825_consen 49 ARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFFSPTMPLSDSIALSYLG--DRGKD 126 (400)
T ss_pred HHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHccHHHHHHHHHHHHcc--cccCC
Confidence 34678899999999985 6778888888888877777888899988888888888888888888888888775 34455
Q ss_pred HHHHHHHHHHHhhhHHHh-HHhhhhcch---hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccc
Q 014628 82 LSMFYMCIPTGVALGYVY-GGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~-~~~l~~~~~---wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
.|-.....++|.+++... +..+....+ ..+.+++.+..+++.....+ ..|+.+++++.+++.+..
T Consensus 127 YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l-~lp~~~~~~~~~~~~~~~---------- 195 (400)
T PF03825_consen 127 YGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFAL-FLPKTPPKRSAKESVKKL---------- 195 (400)
T ss_pred CCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHH-hCCCCccccccCCCcccc----------
Confidence 666666777777776543 223332222 33456666555444443333 346544221111111000
Q ss_pred cccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCC
Q 014628 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM 237 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (421)
...+..+++|+|++....+..++.+.....+..+.+.|+++.++.
T Consensus 196 -----------------------------------~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~ 240 (400)
T PF03825_consen 196 -----------------------------------LGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGY 240 (400)
T ss_pred -----------------------------------cchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 012344688999999888888888888888999999999998865
Q ss_pred ccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-hhhHHHHHHHH----HHHHHH
Q 014628 238 SNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-SSLYGFLALFT----VGELLV 311 (421)
Q Consensus 238 ~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~ 311 (421)
+.... ...++..++.++.....+++.+|+|.+ +++..+.+..++=..+.... ++.+....... +-+...
T Consensus 241 ~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf 315 (400)
T PF03825_consen 241 SGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTF 315 (400)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHH
Confidence 43332 333556677888888899999999887 77777777766665555544 44443333333 467777
Q ss_pred HhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+.....++.+..|++.|+++.++++.....+|..+|..+.|++.|+.|
T Consensus 316 ~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 316 GLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred HHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 777888889999999999999999999877777799999999999999876
No 108
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=5.4e-20 Score=157.89 Aligned_cols=333 Identities=14% Similarity=0.103 Sum_probs=250.8
Q ss_pred ccchhhHHHHhhhhcCCchH-HHHHHHHHHHHHhhhhhhhh---HHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 4 LLVASPIFASLAKSHNPFRL-IGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~-~~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.++-+|+.|.++|+.|+||- +-....+..++.++..++++ ++..++.-.+..++.......-.+++.+..++++-+
T Consensus 71 ia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~~~ 150 (438)
T COG2270 71 IALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDNMG 150 (438)
T ss_pred HHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehhhHhhhhcCccccC
Confidence 35667899999999996665 55556666666666677665 444455777788888888888999999999998888
Q ss_pred hHHHHHHHHHHHHhhhHHHhH--Hhh-h---------------hcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCc
Q 014628 80 AWLSMFYMCIPTGVALGYVYG--GVV-G---------------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 141 (421)
Q Consensus 80 ~~~~~~~~~~~~G~~~g~~~~--~~l-~---------------~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 141 (421)
+..+.-.....+|.++.-++. ..+ . +...-|..+.+.++-.++..+-.++..|+.++.. .+
T Consensus 151 riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm~~~v~~~~~~~-~~ 229 (438)
T COG2270 151 RISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPMILNVHDAEKIS-SP 229 (438)
T ss_pred cccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHHHhccccccccc-cc
Confidence 887776666666665544442 111 1 2234678888888777777776666655432211 00
Q ss_pred cccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHH
Q 014628 142 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 221 (421)
Q Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (421)
+ .+.....+++.+.++++..+++.+...+++.+++.-+.+
T Consensus 230 ~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~ 269 (438)
T COG2270 230 P----------------------------------------PTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVN 269 (438)
T ss_pred c----------------------------------------hHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHH
Confidence 0 011225667778889999999999999999999999999
Q ss_pred HHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014628 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 300 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
....+...|..+.+|.+..+. .+.....+.+++|.++.|++.||++.| +++..+..+....++...+......+
T Consensus 270 til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~~~~~~~~~~~~~~f 344 (438)
T COG2270 270 TILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSIAALYLIFLEGELDF 344 (438)
T ss_pred HHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHHHHHHHHHccccHHH
Confidence 999999999998999997766 445677799999999999999999998 66666666666666665555656666
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
.++..+.+...+..+...-++..+.+|+++-++..|+++...+. ++..||.+.+.+.+.+|+.+..+.....+..++..
T Consensus 345 ~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 345 WILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 66777788888888999999999999999999999999766665 88999999999999999887777777666666655
Q ss_pred HHH
Q 014628 381 IWF 383 (421)
Q Consensus 381 ~~~ 383 (421)
.+.
T Consensus 424 ~L~ 426 (438)
T COG2270 424 LLL 426 (438)
T ss_pred hEE
Confidence 544
No 109
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.86 E-value=1.2e-20 Score=174.02 Aligned_cols=345 Identities=13% Similarity=0.014 Sum_probs=207.9
Q ss_pred hhHHHHhhhhcC-----CchHHHHHHHHHH-HHHhhhhhhhhHHHHH-HHHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 8 SPIFASLAKSHN-----PFRLIGVGLSVWT-FATAGCGSSFDFWSIA-ICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 8 ~~~~g~l~Dr~G-----rr~~~~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
.+++|+++||++ ||+.++++.++.. ++....+..++..... +..++.+++.+...++..++..|..+ +++..
T Consensus 77 K~l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~~~e~~~-~~~~~ 155 (468)
T TIGR00788 77 KPFAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSLYSERIR-ESPSA 155 (468)
T ss_pred HHHHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhh-cCCCc
Confidence 456999999998 7777888877763 4444444445544444 48899999999999999999999998 44444
Q ss_pred ---HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccc
Q 014628 81 ---WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 157 (421)
Q Consensus 81 ---~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (421)
..+......++|.++|+.+++.+.+.++||..|++.+.+.++..+. .++.||.+... .++..+..
T Consensus 156 ~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~-~~~~~E~~~~~-~~~~~~~~---------- 223 (468)
T TIGR00788 156 GPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV-SNLSKERRAFV-RPRIGTYL---------- 223 (468)
T ss_pred CCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH-HHhcccccccc-cccccccc----------
Confidence 3344444556899999999999999999999999998887766433 34445532100 00000000
Q ss_pred cccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHH-HHHHHHHHHHHhhHHHHHhhC
Q 014628 158 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (421)
....... . .......++...+....+++|.++...+..++ +......... .-.+..+..+
T Consensus 224 ---------~~~~~~~--~-------~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~-~f~~~~~~lG 284 (468)
T TIGR00788 224 ---------EMNMALL--T-------LGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGS-VFCATTQCLP 284 (468)
T ss_pred ---------hhhhhhh--h-------hhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCce-eEEEEcccCC
Confidence 0000000 0 00000111112334445677877765554444 2111111101 0002223456
Q ss_pred CccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-h---------hhhhHHHHHHHH
Q 014628 237 MSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-C---------LSSLYGFLALFT 305 (421)
Q Consensus 237 ~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~~~~~ 305 (421)
.++....+ .....++.+++..+.+++.+|++.| +.+..+.++.....+... . .++.+.......
T Consensus 285 ~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 285 GGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred CCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 66555533 3555677788888888887777766 666666655555443221 0 122233444556
Q ss_pred HHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc----cchhhhHHHHHHHHHHHHH
Q 014628 306 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN----NWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~ 381 (421)
+.+++.+....+...++.+..|++.+++..++.+...+. |..+++.+++.+.+..| +++..+....++.+...+.
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~~ 438 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL-GSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLLP 438 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHH
Confidence 677777788888899999999999999999999777665 89999999999988876 3444444443333333332
Q ss_pred HHHhhhhcc
Q 014628 382 WFVGIFLKS 390 (421)
Q Consensus 382 ~~~~~~~~~ 390 (421)
......+|+
T Consensus 439 l~~~~llP~ 447 (468)
T TIGR00788 439 LPLLHLLPR 447 (468)
T ss_pred HHHHHhCCC
Confidence 222224454
No 110
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.86 E-value=1e-19 Score=146.79 Aligned_cols=320 Identities=11% Similarity=0.001 Sum_probs=204.1
Q ss_pred cchhhHHHHhhhh-cCCchHHHHHHHHHHHHHhhhh---hhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 5 LVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 5 ~i~~~~~g~l~Dr-~Grr~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
.+-+.++|++.|| +|-|..-++-+....++.++++ ..+.+|.+.++|++.|+|.-.....-..+..-|+..||.+.
T Consensus 93 vVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~ 172 (459)
T KOG4686|consen 93 VVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNF 172 (459)
T ss_pred EEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccc
Confidence 4556789999997 6877765555555566666654 57899999999999999988888888999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhH------H---HHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhh
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWR------Y---AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 151 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr------~---~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 151 (421)
++|+.....-+|..+--.+.+++.+..+-- . ..+..+.......+.+.... .. .+++.+.....+
T Consensus 173 vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~l----g~--~D~rAerilh~e 246 (459)
T KOG4686|consen 173 VFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSL----GL--SDDRAERILHLE 246 (459)
T ss_pred hhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHh----hh--hhhHHHHHHhhh
Confidence 999999999999888777777776543210 0 11111111111111111111 00 000100000000
Q ss_pred cccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHH
Q 014628 152 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 231 (421)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (421)
+. ...+ +.+ .++.+. -.|.+|.+.+...++.....-+....|.++
T Consensus 247 --------~g-----------~~Ge--~pk------------Ltdv~~--f~ppfw~~~iicv~yyva~fPFi~lg~~fF 291 (459)
T KOG4686|consen 247 --------EG-----------FLGE--EPK------------LTDVNT--FYPPFWVLVIICVLYYVAWFPFITLGPMFF 291 (459)
T ss_pred --------cC-----------cccC--Ccc------------cccccc--cCccHHHHHHHHHHHHHHHHHHhhhhHHHH
Confidence 00 0000 000 011111 247788888888888888888999999999
Q ss_pred HHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH-HHHHHHHHHHH-hhhhhHHHHHHHHHHH
Q 014628 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT-FLGAISCLTAF-CLSSLYGFLALFTVGE 308 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 308 (421)
++.+|.++.+. .+.+.....+.+.+++.|.++||+|++ ...+.+. +.....-.... ..-+++.. +++.|
T Consensus 292 ~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy~~---m~~lG 363 (459)
T KOG4686|consen 292 QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPYTS---MTFLG 363 (459)
T ss_pred HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHHHH---HHHHh
Confidence 99999997655 344556667778888999999999998 3333322 22222222222 22234433 34444
Q ss_pred HHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 309 LLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
..........+..++..+|.++.|++.|..+...+. |-.+.|++.|.+.|.-|+|.+.-.++.++
T Consensus 364 LsysllAcslWP~va~~vpE~qLGTaygf~qsIqNL-gla~i~Iiag~i~d~~g~y~~le~ffl~~ 428 (459)
T KOG4686|consen 364 LSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNL-GLAFIPIIAGFIADGDGSYDNLEAFFLII 428 (459)
T ss_pred hhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhh-hhhHHhhhhheeecCCCchhhHHHHHHHH
Confidence 444433334566677778889999999999888887 99999999999999887765544444433
No 111
>PRK11462 putative transporter; Provisional
Probab=99.85 E-value=1.1e-18 Score=161.09 Aligned_cols=303 Identities=13% Similarity=0.037 Sum_probs=181.2
Q ss_pred cchhhHHHHhhhh----cCCchH-HHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 5 LVASPIFASLAKS----HNPFRL-IGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~i~~~~~g~l~Dr----~Grr~~-~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++.-|+.|.++|| +||||. ++++.+..+++..++-..++ ...+.+.-++..++.......-.++..|..
T Consensus 59 ai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt 138 (460)
T PRK11462 59 AISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVIT 138 (460)
T ss_pred HHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhc
Confidence 4567899999996 687665 56677777777766544442 334555666778888888888889999998
Q ss_pred C-CCCchhHHHHHHHHHHHHhhhHHHhHHhhhhc-------chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc
Q 014628 74 P-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~-------~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+ ++||++..++...+..+|..+++.+...+.+. .+|+....+.+++.++...+++...+|..+. ++.+
T Consensus 139 ~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~~~i~~~~~kE~~~~----~~~~ 214 (460)
T PRK11462 139 NDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMMLAFCFFTTKERVEA----PPTT 214 (460)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHhcceeccCC----CccC
Confidence 7 68899999999999999988887776554432 3588888777777666665555444442110 0000
Q ss_pred hhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014628 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
. +..+.++..++||.++.+....++..........
T Consensus 215 ~---------------------------------------------~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~ 249 (460)
T PRK11462 215 T---------------------------------------------SMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGG 249 (460)
T ss_pred C---------------------------------------------CHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0123466777888887766555444444333333
Q ss_pred HhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH-HHHHHHHHHHhhh-hhHHHHHH
Q 014628 226 WGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF-LGAISCLTAFCLS-SLYGFLAL 303 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~ 303 (421)
....|.....+.+.....+.....+..+++.++++++.||+++| +....... ......+...... +.....+.
T Consensus 250 ~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (460)
T PRK11462 250 AMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWTNALLAVISLAMFFVPMQASITMFVF 324 (460)
T ss_pred HhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHhchhHHHHHHHH
Confidence 33333333344332222334556677888999999999999987 44332222 2221222222212 22223333
Q ss_pred HHHHHHHHHhccCchhhhhhcccC-------CchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.++.+++.+...+....+..|..+ .+..|...+..+.... +|..+++.+.|.+.+..|
T Consensus 325 ~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~K-lg~alg~~i~g~iL~~~G 389 (460)
T PRK11462 325 IFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLK-LGLAFGGALIGWMLAYGG 389 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHH-HHHHHHHHHHHHHHHHcC
Confidence 444555554444444555555443 1223444455534444 488888888888877644
No 112
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.84 E-value=1.4e-22 Score=187.38 Aligned_cols=342 Identities=21% Similarity=0.382 Sum_probs=3.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh---------------------------------------
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--------------------------------------- 42 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~--------------------------------------- 42 (421)
++..+..++..++.+|..|-|++-.|.++.+++++++++-+
T Consensus 49 i~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~ 128 (539)
T PF03137_consen 49 IGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQD 128 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccccccccccccccccccccccCcccc
Confidence 45677888889999999999999999999999999876420
Q ss_pred -----------hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcc----
Q 014628 43 -----------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---- 107 (421)
Q Consensus 43 -----------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~---- 107 (421)
-+..+++++++.|+|....++.+.+|+-|..++++-+..+|+..+...+|.++|.++++.+.+.+
T Consensus 129 ~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~ 208 (539)
T PF03137_consen 129 CCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGILYAMSILGPALGFLLGSFCLRIYVDFP 208 (539)
T ss_dssp -----------------------SSS------------------------------------------------------
T ss_pred ccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhhhHHhhccHHHHHHHHHHHHhceeCCc
Confidence 13567889999999999999999999999999999999999999999999999999998776321
Q ss_pred ------------------hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCccccccc
Q 014628 108 ------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 169 (421)
Q Consensus 108 ------------------~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (421)
.|-.-|++.+.+.++.++..+++ |+..+...+.++.++... ...
T Consensus 209 ~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~~~~~~~~~~~~~-----------------~~~ 270 (539)
T PF03137_consen 209 KVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPGTSERQEEKESSE-----------------RKE 270 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCCcccccchhhhhh-----------------cch
Confidence 26666777777766666665555 554433211111000000 000
Q ss_pred chhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-H-HHhh
Q 014628 170 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M-FGGV 247 (421)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~ 247 (421)
++...++..+.+..+......+++....+++++||.+....++.........++.+|+|.|++.+++.++..+ . ...+
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v 350 (539)
T PF03137_consen 271 EDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQASLLTGIV 350 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhh
Confidence 0000000011111112235567778889999999999999999999999999999999999999999886444 2 2344
Q ss_pred hhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--------------h-------------------
Q 014628 248 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--------------L------------------- 294 (421)
Q Consensus 248 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~------------------- 294 (421)
...++++|.+++|++.+|++-+.+...+......++..+.....++ .
T Consensus 351 ~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~ 430 (539)
T PF03137_consen 351 SIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSC 430 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCCCCCCCCc
Confidence 4567789999999999999765443333333333333322111111 0
Q ss_pred ------------------hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHH
Q 014628 295 ------------------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 295 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
.....+++..++..+..+....+......+.+++++|+.|.|+.....+.+|.+-+|+++|.
T Consensus 431 ~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~ 510 (539)
T PF03137_consen 431 CSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGA 510 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcchHHHHhH
Confidence 01223444555556666777788888899999999999999999999999999999999999
Q ss_pred hhhcc
Q 014628 357 LQDHV 361 (421)
Q Consensus 357 l~~~~ 361 (421)
+.|..
T Consensus 511 iiD~t 515 (539)
T PF03137_consen 511 IIDST 515 (539)
T ss_dssp -----
T ss_pred HHhhh
Confidence 99953
No 113
>PRK09848 glucuronide transporter; Provisional
Probab=99.84 E-value=6.1e-19 Score=163.31 Aligned_cols=304 Identities=10% Similarity=0.007 Sum_probs=185.6
Q ss_pred ccchhhHHHHhhhhc----CCchH-HHHHHHHHHHHHhhh-h----hhhh--HHHHHHHHHHhhhhhhhhccchhhhhhc
Q 014628 4 LLVASPIFASLAKSH----NPFRL-IGVGLSVWTFATAGC-G----SSFD--FWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~----Grr~~-~~~~~~~~~~~~~~~-~----~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
.++..++.|+++||. ||||. +.++.+...+..++. . ++++ ...+++.-++.+++.+...+...++..+
T Consensus 57 ~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~ 136 (448)
T PRK09848 57 DAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLTYMGLGLCYSLVNIPYGSLATA 136 (448)
T ss_pred HHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHHHHHHHHHHHHhcccHhhhhhh
Confidence 467889999999996 77774 455555444444432 1 1122 2334445567788888888888888777
Q ss_pred cCCC-CCchhHHHHHHHHH-----HHHhhhHHHhHHhhhhcc--hhHHHHHHHHHHHHHHHHHHHhcccccccccCCccc
Q 014628 72 NAPV-PQKTAWLSMFYMCI-----PTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAES 143 (421)
Q Consensus 72 ~~~~-~~r~~~~~~~~~~~-----~~G~~~g~~~~~~l~~~~--~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 143 (421)
..++ ++|.+..+.-..+. .++..++|.++....+.. +|.....+.++++++..++.+...||+.+. ++
T Consensus 137 ~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~e~~~~----~~ 212 (448)
T PRK09848 137 MTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMVLYFICFKSTRENVVR----IV 212 (448)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHHHHHHHcCcEeccCC----Cc
Confidence 7654 67888776665443 345556666655432111 122122233333333333333333442110 00
Q ss_pred cchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHH
Q 014628 144 GKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAY 223 (421)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (421)
++ ....+.++.+++||.++...+..++........
T Consensus 213 ~~---------------------------------------------~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~ 247 (448)
T PRK09848 213 AQ---------------------------------------------PSLKISLQTLKRNRPLFMLCIGALCVLISTFAV 247 (448)
T ss_pred cC---------------------------------------------CCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH
Confidence 00 011234677889999998888777777777777
Q ss_pred HHHhhHHHHHhhCCccchhHHHhhh-hHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHH
Q 014628 224 SYWGPKAGYNIYHMSNADMMFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGF 300 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 300 (421)
..+.|.|.++..+.+.....+.... .++.+++.++.+++.||+++| +.+..+..+..+..+.....+ +.+..
T Consensus 248 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~~g~~~~~i~~~~~~~~~~~~~~~~ 322 (448)
T PRK09848 248 SASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFLIGALLGTCGYLLFFWVSVWSLPVA 322 (448)
T ss_pred hhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHcCchhHHHH
Confidence 7778888887777665433333232 456677889999999999987 666655555444444333322 34444
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCc-------hhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.+...+.+.+.+...+...+...+..+.+ .+|...|+.+..... |..+++.+.+.+.+..|
T Consensus 323 ~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl-g~aig~~i~g~~l~~~G 390 (448)
T PRK09848 323 LVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC-GQAIGGSIPAFILGLSG 390 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 44555667777777777777777776643 458889998655555 88899999988877654
No 114
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.83 E-value=4.3e-18 Score=149.70 Aligned_cols=328 Identities=15% Similarity=0.116 Sum_probs=212.6
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHH---HHHhhhhhhh----hHH-HHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWT---FATAGCGSSF----DFW-SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~---~~~~~~~~~~----~~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
..+.+|+.|.++||+|.||-++..+.+.. ...+...+.+ |.+ ..+++-+..|+......|+.-+++.++.
T Consensus 56 ~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~s-- 133 (412)
T PF01306_consen 56 ALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVS-- 133 (412)
T ss_dssp HHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHH--
T ss_pred HHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHH--
Confidence 45678999999999997776554433221 2222222222 221 2233333344444445555556655554
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++.+.-.|-.....++|.+++..++|.+.+. +-+..|++....+++..++.++..|+.++.....+..+..
T Consensus 134 r~~~feYG~~R~wGSig~ai~s~~~G~L~~i-~p~~~fwi~s~~~~il~lll~~~~~~~~~~~~~~~~~~~~-------- 204 (412)
T PF01306_consen 134 RRNGFEYGRARMWGSIGFAIASLLAGILFNI-NPNIIFWIASAAAIILLLLLLLLKPDVPPQAEVADALGAK-------- 204 (412)
T ss_dssp HHHSS-HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHSS---SSSSS-SSTTSSS---------
T ss_pred HHhcCCcchHHHHhhHHHHHHHHHhheeeee-CccHHHHHHHHHHHHHHHHHHHcCCcCchhhhhhcccccC--------
Confidence 2345567777888899999999999998873 5678888877776666666665555432221111100000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhh
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
+.+...++..+++|+|++|...+........+..+....|.|..+.+
T Consensus 205 ---------------------------------~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f 251 (412)
T PF01306_consen 205 ---------------------------------KDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFF 251 (412)
T ss_dssp --------------------------------------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ---------------------------------CCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00001245678889999999888766666677777777788887765
Q ss_pred CCccchh----HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 014628 236 HMSNADM----MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 236 ~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
.....+. .+.++..+..++...+..++.+|+|.| +.++....+..+=.......++++.....-.+-+.-.
T Consensus 252 ~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~ 326 (412)
T PF01306_consen 252 QSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEF 326 (412)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHH
T ss_pred cccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHH
Confidence 5442221 233555677788888999999999998 7888777777777777777888888888888888888
Q ss_pred HhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHH
Q 014628 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 381 (421)
........-++.+.+|++..++...+.......+|..+.+.+.|.++|+.| ++..+++.+.+.+...++
T Consensus 327 ~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G-~~~tylimg~iv~~~~li 395 (412)
T PF01306_consen 327 PLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIG-FQHTYLIMGLIVLPFTLI 395 (412)
T ss_dssp HHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcC-cHHHHHHHHHHHHHHHHH
Confidence 788888899999999999988888886545555588888889999999987 666777776664444433
No 115
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.77 E-value=1.2e-16 Score=140.62 Aligned_cols=374 Identities=11% Similarity=0.093 Sum_probs=211.6
Q ss_pred chhhHHHHhhhhc-CCchHHHHHHHHHHHHHhhhhhhh--hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCC--chh
Q 014628 6 VASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQ--KTA 80 (421)
Q Consensus 6 i~~~~~g~l~Dr~-Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~--r~~ 80 (421)
+...++|+++||+ |+|+++..|.++..+|.++.+.++ +...++++-++.++|.|..-+...++++|.+|+++ |-.
T Consensus 76 ~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~ 155 (498)
T COG3104 76 LTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDG 155 (498)
T ss_pred HHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCC
Confidence 3568899999996 999999999999999999999984 78899999999999999999999999999998753 778
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccccccccc
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 160 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (421)
.+++++.+.++|..++|.+.+++.+.+||+..|.+.++-.....+..++. ++.......++++...............-
T Consensus 156 gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~-~r~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (498)
T COG3104 156 GFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLG-RRHVKGIGGVPDPNPLSFNFLLPVLGGLV 234 (498)
T ss_pred CccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-cchhcCCCCCCCccchhhhhhhhhHHHHH
Confidence 99999999999999999999999999999999999887665555444443 33322221111111111000000000000
Q ss_pred C--Ccc-cccccchhhhhhhccccchhhhhhhhhhh----h--hhhHHhh-cchhHHHHHHHHHHHHHHHHHHHHHhhHH
Q 014628 161 L--NDH-VSEDISDQASERSIKSIGESRFLNQLSQF----S--QDTKVLL-QEKVYVVNVLGYIAYNFVIGAYSYWGPKA 230 (421)
Q Consensus 161 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (421)
. -.. .......+..........-........+. . +..++++ --+.+....+.+.++......+..|....
T Consensus 235 ~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~ 314 (498)
T COG3104 235 VMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVIFWALYEQMGSSLNLYADRN 314 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHh
Confidence 0 000 00000000000000000000000000000 0 0111110 00111122222222222333333443333
Q ss_pred HHHh-hCCccchhHHHhhhhHHHHHHhhhhhHHHhhhcccc--chhhHHHHHHHHHHHHHHHHHHhh----------hhh
Q 014628 231 GYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATI--SNAFKLLSAATFLGAISCLTAFCL----------SSL 297 (421)
Q Consensus 231 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 297 (421)
..+. ++.+.....+.++..+.-++.+++..++..+.+++. ++.+.-...+..++...++.+... .+.
T Consensus 315 v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~fl~l~~~~~~~~~~~~~~s~ 394 (498)
T COG3104 315 VNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGFLILLLAGIWFGGPSGLVSV 394 (498)
T ss_pred hcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHHHhhcCCCCCcCH
Confidence 3333 334444445666666777777777777777754442 221122233333333333322221 145
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHH------hhhccccchhhhHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV------LQDHVNNWRKTTLAL 371 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~------l~~~~g~~~~~~~~~ 371 (421)
++.+....+..++.-+..+...+.+.+..|+...+..++.. ......|+.++..+.+. ..+.. .+...|..+
T Consensus 395 ~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~w-fLt~a~~~~l~g~va~~~~~~~~~~~~~-~~~~~F~~~ 472 (498)
T COG3104 395 WWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMW-FLTVAAGQTLGGQVAGLTAVTDPAYTAF-IEGRVFGTI 472 (498)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHH-HHHHHHHHHhhceecccccccchhhhhh-hhhhhHHHH
Confidence 66677777788888888888899999999999999999988 44444466655555442 22221 233556666
Q ss_pred HHHHHHHHHHH
Q 014628 372 TSIFFLAAGIW 382 (421)
Q Consensus 372 ~~~~~~~~~~~ 382 (421)
+...++.....
T Consensus 473 g~v~i~~~~~~ 483 (498)
T COG3104 473 GVVAIVIGILL 483 (498)
T ss_pred HHHHHHHHHHH
Confidence 55554444443
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.77 E-value=2.8e-16 Score=139.64 Aligned_cols=308 Identities=10% Similarity=0.030 Sum_probs=219.5
Q ss_pred cchhhHHHHhhhh----cCCch-HHHHHHHHHHHHHhhhhhhhh------HHHHHHHHHHhhhhhhhhccchhhhhhccC
Q 014628 5 LVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNA 73 (421)
Q Consensus 5 ~i~~~~~g~l~Dr----~Grr~-~~~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~ 73 (421)
++.-|+.|.+.|| +||+| .++++.+..++.+.++-.+++ ....++.-.+.+++.......-.++..|+.
T Consensus 62 Ai~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT 141 (467)
T COG2211 62 AITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEIT 141 (467)
T ss_pred HHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhc
Confidence 3566888999996 67655 577888888888888877763 444566778889999998888899999987
Q ss_pred C-CCCchhHHHHHHHHHHHHhhhHHHhHHhhhh-------cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccc
Q 014628 74 P-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGK 145 (421)
Q Consensus 74 ~-~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 145 (421)
+ ++||.+..++-+.+.++|..+...+...+.. ..||+..-.+.++++.+..+.+++-..|...+..+.++
T Consensus 142 ~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~v~ER~~~~~~~~~-- 219 (467)
T COG2211 142 QDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVILLLFCFFNVKERVVETQPTKT-- 219 (467)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhcccCccccCcc--
Confidence 5 6789999999999999998776666655542 45899999999888888888877766553321111110
Q ss_pred hhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHH
Q 014628 146 AQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSY 225 (421)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (421)
...++..+++..+++|+.+...++..++.....+....
T Consensus 220 ------------------------------------------~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s 257 (467)
T COG2211 220 ------------------------------------------GVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGS 257 (467)
T ss_pred ------------------------------------------cccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhh
Confidence 00011223456778999999988877777777777777
Q ss_pred HhhHHHHHhhCCccchhHHH-hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHHHH
Q 014628 226 WGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLA 302 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 302 (421)
....|.+...+.+....... .....+.+++.++..++.+|+|+| +....+.++..+..+...+.+ +....++
T Consensus 258 ~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~ 332 (467)
T COG2211 258 IMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIGLLLLAVGYLLLYFTPAGSVVLIVV 332 (467)
T ss_pred hhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 77777776666665444333 344455566688999999999999 777777777777666665554 4555555
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCC-------chhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
..++.+.+.+...+...++++|.+.- +.-|...|... +..-+|.+++..+.|++.+..|
T Consensus 333 ~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~t-F~~K~g~ala~~~~g~~L~~~G 398 (467)
T COG2211 333 ALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMT-FFRKLGLALAGFIPGWILGAIG 398 (467)
T ss_pred HHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHH-HHHHHHHHHHHHHHHHHHHHcC
Confidence 66777788888877777777776432 34567777774 4444588888889999988765
No 117
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.77 E-value=4.2e-17 Score=141.03 Aligned_cols=312 Identities=14% Similarity=0.110 Sum_probs=209.7
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh------hHH--HHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF------DFW--SIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+....+++-|+.|++|-|...+++.++..+|..+-..+. .++ ....+..+.+.++-.....-..+..-|+++
T Consensus 92 ~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~ 171 (480)
T KOG2563|consen 92 SVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPP 171 (480)
T ss_pred HHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCc
Confidence 345567788999999999999999999999999876653 344 667888999888887776666777889999
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhhc------chhHH--HHHHHHHHHHHHHHHHHhcccccccccCCccccchh
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------LNWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 147 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~------~~wr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 147 (421)
+||..+..+-..+..+|.++|.++...+.++ ..|.. .|+..+++..+..++..+..++.++. ++......
T Consensus 172 ~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~ 249 (480)
T KOG2563|consen 172 DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAA 249 (480)
T ss_pred chhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhh
Confidence 9999999999999999999999988888753 34654 35545554444444444444432222 11111100
Q ss_pred hhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHh
Q 014628 148 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWG 227 (421)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (421)
.+..+..++.+..++++++....+.+......+++..+.+
T Consensus 250 ----------------------------------------~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l 289 (480)
T KOG2563|consen 250 ----------------------------------------LQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLL 289 (480)
T ss_pred ----------------------------------------hhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHh
Confidence 0011235678889999999998888877777777777766
Q ss_pred hHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHH-HHHHHh---hhhhHHHHHH
Q 014628 228 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS-CLTAFC---LSSLYGFLAL 303 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~ 303 (421)
...+...+-.+........+..+++++++.++|.+.||.++-+ ............. +.+... ....+.+...
T Consensus 290 ~~~l~~sgY~~~~aG~ig~l~iv~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t 365 (480)
T KOG2563|consen 290 NLALCPSGYEGVFAGYIGALMIVAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTT 365 (480)
T ss_pred hhccccccCCccccchhHHHHHHHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhh
Confidence 5444333322222334556677889999999999999987652 2222222222222 111111 1234445555
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
..+.+++.....|...-+..|..-|..-++..|+.+...+.++.. -..+.+...+..+
T Consensus 366 ~~~~g~~~~~~~Pig~ElgvE~TyPv~E~tSsGll~~~gq~f~~~-~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 366 CGLLGFFGTGYLPIGFELGVETTYPVAEGTSSGLLNLSGQIFGVI-LVFIMGILAEDLG 423 (480)
T ss_pred HHHHHHhhcCCCCcceeeeeeeccccCCcccceeEEeehhHHHHH-HHHHHHHHhhccC
Confidence 666777777888888888888877877788888887777775544 3556666666555
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.71 E-value=2.1e-14 Score=124.25 Aligned_cols=306 Identities=14% Similarity=0.061 Sum_probs=204.2
Q ss_pred chhhHHHHhhhhcC-----CchHH-HHHHHHHHHHHhhhhhh-----h-------h--HH--HHHHHHHHhhhhhhhhcc
Q 014628 6 VASPIFASLAKSHN-----PFRLI-GVGLSVWTFATAGCGSS-----F-------D--FW--SIAICRMLVGVGEASFIS 63 (421)
Q Consensus 6 i~~~~~g~l~Dr~G-----rr~~~-~~~~~~~~~~~~~~~~~-----~-------~--~~--~l~~~r~l~G~~~~~~~~ 63 (421)
...+.+|+.+|+.+ ||..+ ..|.++...+..+..++ . + .+ ...+.-.+.|+|.+....
T Consensus 29 p~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F~l~G~G~~~s~T 108 (403)
T PF03209_consen 29 PLRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAFLLYGLGVHASGT 108 (403)
T ss_pred HHHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHhhHhHhHH
Confidence 34678999999998 77654 55566655555554432 2 1 22 233455778999999999
Q ss_pred chhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHH---HHHHHHHHHHHHHHHHhcccccccccCC
Q 014628 64 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYA---FWGEAILMLPFAVLAFVIKPLQLKGFAP 140 (421)
Q Consensus 64 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~---f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 140 (421)
...+++.|..|+|+|+++.++.....-+|.+++..+.+.+.+.++-.-. +...+++.+...++..+- .|.+.....
T Consensus 109 ~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a~i~~~l~~ia~wg-~E~r~~~~~ 187 (403)
T PF03209_consen 109 SFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVALIALLLNLIALWG-QEPRRSRRA 187 (403)
T ss_pred HHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHHHHh-cccCCcccc
Confidence 9999999999999999999999999999999999999988876653222 222222222222222222 121111000
Q ss_pred ccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHH
Q 014628 141 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 220 (421)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (421)
+.++ ++...+.+.++++..+|.........++....+
T Consensus 188 ~~~~-------------------------------------------~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~ 224 (403)
T PF03209_consen 188 AAAE-------------------------------------------RPRPPFREAWRQVWASPQARRFFVFLFLGTLAF 224 (403)
T ss_pred cCCC-------------------------------------------CCCccHHHHHHHHHhCCChhHHHHHHHHHHHHH
Confidence 0000 000112345666777888887777777777777
Q ss_pred HHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhh-hccccchhhHHHHHHHHHHHHHH---HHHHhhh
Q 014628 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISC---LTAFCLS 295 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 295 (421)
+.-...+-.|.-+.++.+..+. .+......+..++....+++..| .+++ +.....+..+..++ .......
T Consensus 225 ~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~~a~~G~~~~~~~f~lii~a~~~~ 299 (403)
T PF03209_consen 225 FMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----RTAALGCLLGALAFALIILAGPLG 299 (403)
T ss_pred HhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHHHHHHHHHHHhcc
Confidence 7777778888889999996554 66677778888888888888774 3333 33333333333333 2333445
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
+.+.+....++.|++.+.......+.+.+...+++.|..+|.-. ..+.++..++..+.|.+.|..
T Consensus 300 ~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WG-aaQA~A~Glg~~~GG~~~D~~ 364 (403)
T PF03209_consen 300 SPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWG-AAQAIARGLGTFLGGALRDLV 364 (403)
T ss_pred cchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 67778888888999998888888888999998999999999984 444447777787888887753
No 119
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.70 E-value=1.6e-16 Score=122.52 Aligned_cols=132 Identities=30% Similarity=0.386 Sum_probs=120.7
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++..+++++.|++.||+|||+.+..+..+..++.+...+.++++.+.+.+++.|++.+...+....++.|.+|+++|++.
T Consensus 9 ~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (141)
T TIGR00880 9 LGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGVA 88 (141)
T ss_pred hHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhHH
Confidence 45677889999999999999999999999999999998999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
+++.+....+|..++|.+++.+.+..+|++.+++.++..++..+..++..||
T Consensus 89 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 89 LGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred HHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 9999999999999999999999998999999999988877777776666554
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.70 E-value=2.2e-15 Score=136.31 Aligned_cols=314 Identities=12% Similarity=0.108 Sum_probs=209.2
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhh--hhhhhccchhhhhhccCCCCCchhH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV--GEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~--~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
..+.++..|.++||+|||..+.+..+...+..++..+.. +|.++ +.|+ +.+.......++++|....++|...
T Consensus 75 ~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R~~~ 149 (463)
T KOG2816|consen 75 TLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEERSSS 149 (463)
T ss_pred HHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHHHHH
Confidence 456788999999999999999999999888888877766 33333 4444 3345677888999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
+++.......+..++|.+++.+....|.-.+|.+..+..+...+...+..||+....+.++ .... +. ..
T Consensus 150 ~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~-~~~~-------~~---~~ 218 (463)
T KOG2816|consen 150 IGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSD-ATLR-------EL---TP 218 (463)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCcccccc-cccc-------cc---CC
Confidence 9999999999999999999999999999999999999998888888888898765432221 0000 00 00
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHH-HHHHHHhhHHHHHhhCCccc
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI-GAYSYWGPKAGYNIYHMSNA 240 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 240 (421)
..... ....+..+.....-.+|..+.+.+..+...... ....-..+.|+...+++++.
T Consensus 219 ---------~~~~~------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~ 277 (463)
T KOG2816|consen 219 ---------GSLDS------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKK 277 (463)
T ss_pred ---------Ccccc------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHH
Confidence 00000 000011111111112344444343333332222 22221346677778888876
Q ss_pred hhH-HHhhhhHHHHHHhhhhh-HHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 241 DMM-FGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 241 ~~~-~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
... +.+.......++.++.. .+...++.+ +.+..+...-........+..+.|....... .........+..
T Consensus 278 ~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v-~~~~~~~~~pa~ 351 (463)
T KOG2816|consen 278 EFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGV-VVALAGIVFPAI 351 (463)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHH-HHHhhcchhHHH
Confidence 653 44555666666666655 677777777 6555555555555555555555555443333 334445666777
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+.....+.++.+|++.++....... ...++|.+.+.+...+
T Consensus 352 ~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 352 RAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALT 393 (463)
T ss_pred HhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHH
Confidence 88888889999999999999655555 7788898888886544
No 121
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.63 E-value=3.8e-13 Score=117.96 Aligned_cols=327 Identities=11% Similarity=0.005 Sum_probs=216.1
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+....++...+.|..+.|++++++.+...+...+..+.++...+-+..+.-|++.+. ..+.++++-...|+++--++.+
T Consensus 54 yl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts 132 (412)
T PF01770_consen 54 YLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTS 132 (412)
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHH
Confidence 456678889999999999999999999999999999999999999999999999985 6678899999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhh--cchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 84 MFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~--~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
...++..+|..++.++|..+.. ..+.+..+++......+..++.+++ |..++..--.++.+.... ..+.+.+..
T Consensus 133 ~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fL-P~~~~S~~f~r~~~~~~~---~~~~~~~~~ 208 (412)
T PF01770_consen 133 YTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFL-PMPKRSLFFHRKPPAEQD---ANESESDKM 208 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHc-CCCCcccceeccCccccc---ccccccccc
Confidence 9999999999999999998876 3446666666554444444444444 443221100011000000 000000000
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
++..++. .+.++.+...+.......+..++++++..++|.++...+-+.+...+++.+.+|.....++....+...
T Consensus 209 ~~~~~~~----~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~ 284 (412)
T PF01770_consen 209 NESPESS----SSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNES 284 (412)
T ss_pred ccccccc----cccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCc
Confidence 0000000 011111111122223455677788888899999999999888888888888888877776661222111
Q ss_pred ---hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 242 ---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
...-++..+.+.++.+..|++-.++.+.. ...+....++.+..++++...++.|...+..++.........+..
T Consensus 285 vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~---~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA 361 (412)
T PF01770_consen 285 VYNGAVEAASTLLGAIAALLAGYVKVNWDRWG---ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIA 361 (412)
T ss_pred ccchHHHHHHHHHHHHHHHHHhHhhcchHHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22335555666777778888744443321 133445555566666677777888888888887777777776666
Q ss_pred hhhhhcccCCchhhHHHHHHHHHH
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSI 342 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~ 342 (421)
..-++.....+.-+...|+++...
T Consensus 362 ~~qIA~~l~~e~yaLVFGiNtf~A 385 (412)
T PF01770_consen 362 SFQIAKNLSEERYALVFGINTFVA 385 (412)
T ss_pred HHHHHHhccccceeeeeeeHHHHH
Confidence 777777777777888888875433
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.57 E-value=1.1e-13 Score=126.26 Aligned_cols=318 Identities=13% Similarity=0.080 Sum_probs=185.8
Q ss_pred hhhHHHHhhhhcC-----CchHHHHHHHHHHHHHhhhhhh----hhHHHHHHHHHHhhhhhhhhccchhhhhhccCC--C
Q 014628 7 ASPIFASLAKSHN-----PFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVGVGEASFISLAAPFIDDNAP--V 75 (421)
Q Consensus 7 ~~~~~g~l~Dr~G-----rr~~~~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~--~ 75 (421)
.-+++|.++|-+. ||+-++++.++..++.+..+.. .+.....++-++..+|.+.....+-+++.|... +
T Consensus 40 ~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~l~la~~g~a~~DV~aDa~vvE~~~~~p 119 (433)
T PF03092_consen 40 IKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVLLFLASFGYAFADVAADALVVELARREP 119 (433)
T ss_pred HhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHHHHHHHHHHHHHHHhhhHHHHHHhhcCC
Confidence 3578999999873 5555677777776655555543 346666677788889999999999999999874 3
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEG 155 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 155 (421)
++||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+..+++.+| .+.++..+.....
T Consensus 120 ~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~~~~~e-~~~~~~~~~~~~~-------- 190 (433)
T PF03092_consen 120 ESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVALFLLEE-RKVRPADEVFSFG-------- 190 (433)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHHHhhhh-ccccccchhhccc--------
Confidence 4478889999999999999999999999999999999999988877776666666555 1111100000000
Q ss_pred cccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHH-HHHHHHHHHHHHHHHhhHHHHHh
Q 014628 156 SEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAGYNI 234 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 234 (421)
++. ........++.....++.++.|.++...+ ..++............-.+..+.
T Consensus 191 -----------~~~-------------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~ 246 (433)
T PF03092_consen 191 -----------KEE-------------VPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDA 246 (433)
T ss_pred -----------ccc-------------cchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecc
Confidence 000 00000112333455666667777776555 22222111110000000011112
Q ss_pred hC---CccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-h---------hhhhHHHH
Q 014628 235 YH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-C---------LSSLYGFL 301 (421)
Q Consensus 235 ~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---------~~~~~~~~ 301 (421)
.+ +++ ..+..+. +.+.++.+++..+-+++.++... ++++..+.++.....+.-. . .++.+..+
T Consensus 247 ~~gp~fs~--~f~~~~~-~vg~~~~l~g~~~y~~~~~~~~~-R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~l 322 (433)
T PF03092_consen 247 LGGPHFSP--SFYGTLS-IVGSIASLLGILLYRKYFSNWSW-RRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFAL 322 (433)
T ss_pred ccccccCH--HHHHHHH-HHHHHHHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEE
Confidence 22 232 2222222 33344444555555554443222 1444444443333222111 0 11122233
Q ss_pred HHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.-..+........+.+....+.+..|+..-|+..++.....+. |..++..+...+.+..+
T Consensus 323 gd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s~~lg~~l~~~~~ 382 (433)
T PF03092_consen 323 GDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVSSTLGAFLMELFG 382 (433)
T ss_pred EhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 3444555566666777888899999999999999999766666 88888877777776655
No 123
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=4.8e-14 Score=135.10 Aligned_cols=132 Identities=10% Similarity=-0.015 Sum_probs=115.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
++.+++.++.|+++||+|||++++++.++.+++.++.+++++...+++.+++.|++.++.++...++++|++|.++|+++
T Consensus 606 l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~Rgta 685 (742)
T TIGR01299 606 LAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELYPSDKRATA 685 (742)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 35577899999999999999999999999999999999999888888899999998888899999999999999999999
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
+|+......+|.++||.+++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 686 ~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 686 FGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 9999999999999999999988764 4567888887777666655554 47743
No 124
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.52 E-value=8.6e-14 Score=127.34 Aligned_cols=131 Identities=17% Similarity=0.253 Sum_probs=113.7
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh----hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCch
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 79 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~ 79 (421)
.+++.++.|+++||+|||+++..+.++.+++..+..... +++.+++.+++.|++.+...+....++.|++|+++|+
T Consensus 264 ~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g 343 (418)
T TIGR00889 264 EIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRA 343 (418)
T ss_pred HHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 456788999999999999999999999988876666532 3466778999999999988888899999999999999
Q ss_pred hHHHHHH-HHHHHHhhhHHHhHHhhhhc------chhHHHHHHHHHHHHHHHHHHHhccccc
Q 014628 80 AWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 80 ~~~~~~~-~~~~~G~~~g~~~~~~l~~~------~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
+++++.+ ...++|.++||.++|.+.++ +||+..|.+.+++.++..++.+++.||+
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999997 67889999999999999887 4699999999998888888888877764
No 125
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.49 E-value=7.2e-13 Score=118.43 Aligned_cols=336 Identities=13% Similarity=0.156 Sum_probs=194.7
Q ss_pred ccccchhhHHHHhhhhcCC-chHHHHHHHHHHHHHhhh-hhh---h-hHHHHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 2 VGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGC-GSS---F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Gr-r~~~~~~~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
+|.+++++..|+...|.+. |+.++.+.++..++.++. ++. + ..+.++++|++.|+|.+ ......+|+++....
T Consensus 82 lg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~ 160 (488)
T KOG2325|consen 82 LGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTV 160 (488)
T ss_pred HHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCc
Confidence 4678899999999999986 778899999999999998 332 3 67889999999999988 456788999999888
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhhc----------c---hhHHHHHHHHHHHHHHHHHHHhcccccccccCCcc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 142 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~----------~---~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 142 (421)
++|.|+++....+..+|.++||.+...+... . -+..+-|+.+++.++..+...+...|..+...+++
T Consensus 161 ~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~ 240 (488)
T KOG2325|consen 161 EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKK 240 (488)
T ss_pred cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccc
Confidence 9999999999999999999999887665521 0 13456677777777777777777766554422111
Q ss_pred ccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHh-hcchhHHHHHHHHHHHHHHHH
Q 014628 143 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL-LQEKVYVVNVLGYIAYNFVIG 221 (421)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 221 (421)
..+.. +++.+. +..+.. +..+..+...+..+...+...
T Consensus 241 ~~~~~-----------------------~~~~~~------------------~~~~~~~~d~~~~~vc~~~~~~~~~~~~ 279 (488)
T KOG2325|consen 241 KRSVE-----------------------EEKSDI------------------EKVKKPKLDWVAVLVCIFLRFVVNFIAT 279 (488)
T ss_pred cccch-----------------------hhccch------------------hhhccCChhHHHHHHHHHHHHHHHHHHH
Confidence 11100 000000 000000 112223333444455555555
Q ss_pred HHHHHhhHHHHHhhCCccchh-HHH-hhhhHHHHHHh-hhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh---h
Q 014628 222 AYSYWGPKAGYNIYHMSNADM-MFG-GVTIVCGIVGT-ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---S 295 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 295 (421)
...+..+.+....++.+.... ... ....+.+++.. +...+..-|.++...+ ..+...+........+..... .
T Consensus 280 ~iet~~~~~~m~~y~w~~~~av~~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r-~~~~~g~l~~f~~~~i~~yp~~~~s 358 (488)
T KOG2325|consen 280 TIETLSSALTMVMYGWTGSEAVLYNGITLSISGILSVILLLLYIFTRLGKIDKR-RIILLGFLIFFLSYYIFTYPWGFYS 358 (488)
T ss_pred HHHhccchHHHHHhccccchHHHhhhhHHHHHHHHHHHHHHHHHHHHhhhhccc-eeeeehHHHHHHhhheeeeeccccc
Confidence 555666666666677664333 222 22233332222 2333333343331100 022222222222222111100 0
Q ss_pred ---------------------------hhHHHHHH-HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcc
Q 014628 296 ---------------------------SLYGFLAL-FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 347 (421)
Q Consensus 296 ---------------------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~ 347 (421)
+.+.++.. ..+.+...-.......++.++...|++++++.+++. ..+..+.
T Consensus 359 ~pv~~~~~~~~~~~~~~y~wc~~~~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~-~~~s~~~ 437 (488)
T KOG2325|consen 359 GPVQPYNTTYAGCDFEEYSWCDTTTAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFS-ISGSIAR 437 (488)
T ss_pred cccccccccccCcCcccchhhccCcccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEE-eccchhh
Confidence 01111111 112222222334457788889999999999999995 4444588
Q ss_pred cCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 348 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 348 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.++|.+........| +++.+.......++....+
T Consensus 438 ~~~~~~~t~~~~~~g-~~~v~~~~~~~~l~~~~l~ 471 (488)
T KOG2325|consen 438 VVGPIFSTAIFTLSG-PRPVWIILLCLLLVVAALW 471 (488)
T ss_pred hhhHHHHhhhHHhcC-ccHHHHHHHHHHHHHHHHH
Confidence 889888887777766 5555555555444444333
No 126
>PRK10054 putative transporter; Provisional
Probab=99.49 E-value=2.4e-12 Score=117.10 Aligned_cols=168 Identities=10% Similarity=0.009 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++.+.+..++.....+....++|.|+++.++.+..+.. ..+...+..+++.+..|+++||+||| +.+..+.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~ 81 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT 81 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence 4456666677778888888888999999988888876553 34566778888999999999999998 66666666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
...+..+.....++.+..++...+.+...+...+....+..|..|+++|+++.|+.+...+. |..++|.+.+++.+ .
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~- 158 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-Q- 158 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-h-
Confidence 66565555555666655555555555555555666778888999999999999999777766 99999999998876 3
Q ss_pred cchhhhHHHHHHHHHHH
Q 014628 363 NWRKTTLALTSIFFLAA 379 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (421)
+++..+...+.+.++..
T Consensus 159 g~~~~f~~~~~~~~i~~ 175 (395)
T PRK10054 159 SINLPFWLAAICSAFPL 175 (395)
T ss_pred ccCcHHHHHHHHHHHHH
Confidence 47777776665554443
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.47 E-value=5.7e-13 Score=124.83 Aligned_cols=136 Identities=10% Similarity=0.003 Sum_probs=101.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhh---hhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+++++++.|++.+........++.|.+|++.|
T Consensus 297 ~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p~~~R 376 (490)
T PRK10642 297 IGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFPTHIR 376 (490)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccc
Confidence 356678889999999999999988887654433332 22345677788899999988777777778889999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcc-hhHHHHHHHHHHHHHHHHHHHhccccccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 138 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 138 (421)
+++++.......++..++|.+.+++.+.. +|+.+++...+++++..+..+ +.||++++.
T Consensus 377 g~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~~ 436 (490)
T PRK10642 377 YSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANRP 436 (490)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCCC
Confidence 99999755445566678898888887654 478777777666665555544 448887654
No 128
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.46 E-value=4.9e-13 Score=122.34 Aligned_cols=129 Identities=17% Similarity=0.168 Sum_probs=114.7
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+..++.++.|++.||+|+|+.+..+..+..++.++..+.++.+.+++.+++.|++.+...+.....+.|.+|+++|++++
T Consensus 261 ~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (399)
T PRK05122 261 AFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAAL 340 (399)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 45678899999999999999999999888888888888888888889999999999988888888888999999999999
Q ss_pred HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
++++....+|..+++.+.+.+.+..||++.|++.+++.++..++.++..
T Consensus 341 g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 341 GAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999888777666655543
No 129
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.45 E-value=6.8e-12 Score=115.82 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=124.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.+....+.+++.......+..+.|.+.++ ++.+..+. ...+...++..++.++.|++.||+|+| +.+..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence 333444444555555555667778887766 66775554 445677788899999999999999998 77777777
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+..+.....++.+...+..++.+++.+...+....++.+.+|+++|++++++.+...+. |..++|.+.+++.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 77766666666667766666666677777777788888999999999999999999766665 88999999999998766
Q ss_pred cchhhhHHHHHHHHHH
Q 014628 363 NWRKTTLALTSIFFLA 378 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~ 378 (421)
|+..+.+.++..++.
T Consensus 176 -w~~~f~~~~i~~~~~ 190 (434)
T PRK11663 176 -WRYGMMIAGIIAIVV 190 (434)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 877777766554433
No 130
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.42 E-value=3.1e-12 Score=115.55 Aligned_cols=162 Identities=7% Similarity=-0.040 Sum_probs=117.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHH
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 289 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
....++...........+|.|..+....+.......+...++..++.++.|+++||+||| +.+..+..+......
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~~ 79 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLVA 79 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHHH
Confidence 344455555566666777888777443333333445677788899999999999999998 777666655555444
Q ss_pred HHHhhh-----hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 290 TAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 290 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
...... +.+...+...+.+++.+...+....++.|..|+++|++++++.+..... |..++|.+.+.+.+..+ |
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g-~ 157 (365)
T TIGR00900 80 VLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG-I 157 (365)
T ss_pred HHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-H
Confidence 444444 6666777777788888888888899999999999999999999766655 88999999999988765 7
Q ss_pred hhhhHHHHHHHHHH
Q 014628 365 RKTTLALTSIFFLA 378 (421)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (421)
+..+++.+...++.
T Consensus 158 ~~~~~~~~~~~~~~ 171 (365)
T TIGR00900 158 KWAIWVDAVGFAIS 171 (365)
T ss_pred HHHHHHHHHHHHHH
Confidence 67776655544433
No 131
>PRK12382 putative transporter; Provisional
Probab=99.41 E-value=1.1e-12 Score=119.70 Aligned_cols=128 Identities=12% Similarity=0.109 Sum_probs=115.2
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+..+++++.|++.||+|+|+.+..+..+..++.++..+.++.+.+++..++.|++.+...+...+.+.|.+|+++|++++
T Consensus 261 ~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~ 340 (392)
T PRK12382 261 AFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTAL 340 (392)
T ss_pred HHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHH
Confidence 34678899999999999999999999999888888888888888888999999999988888888899999999999999
Q ss_pred HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Q 014628 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++++....+|..++|.+.+.+.++.||++.|.+.+++.++..++.++.
T Consensus 341 g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 341 GGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999998877766665544
No 132
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.41 E-value=1.1e-12 Score=120.49 Aligned_cols=128 Identities=16% Similarity=0.176 Sum_probs=114.9
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+..|+++|++.++
T Consensus 271 ~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 271 ALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFS 350 (408)
T ss_pred HHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeeh
Confidence 34667788999999999999999998888888888888888889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+++....+|..+||.+++.+.+..||++.|++.+++.++..+..++..
T Consensus 351 ~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 351 YNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999988887777666544
No 133
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.41 E-value=6.8e-13 Score=122.12 Aligned_cols=129 Identities=9% Similarity=0.055 Sum_probs=113.4
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+++.+++|++.||+|+|+.+..+.++.+++.++.+++++.+.+++.+++.|++.+...+....++.|.+|++.|+...
T Consensus 274 ~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~ 353 (420)
T PRK09528 274 LEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIY 353 (420)
T ss_pred HHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeee
Confidence 34578899999999999999999999999999899999999999999999999999888888889999999999998876
Q ss_pred HH-HHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 83 SM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 83 ~~-~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+. ++....+|.+++|.+.|++.+..|||..|.+.+++.++..++.++..
T Consensus 354 ~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 354 LVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred eehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 65 67778899999999999999999999999999888776666655544
No 134
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.40 E-value=6.2e-12 Score=108.73 Aligned_cols=174 Identities=17% Similarity=0.183 Sum_probs=144.0
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHH
Q 014628 202 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 280 (421)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 280 (421)
|.+.+..+.+.+..+++.--.+..-.|...++ ++.+..+. .+.+...+..-++-++.|.++||.+.| ..+..+
T Consensus 27 r~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~g 100 (448)
T COG2271 27 RIQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFG 100 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHH
Confidence 44556666677777777777777777766655 55776565 445788899999999999999999998 888888
Q ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhH--HHhh
Q 014628 281 TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQ 358 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--g~l~ 358 (421)
.+++++..+++.+.++.+.+.++..+.+.+.+..+|+....+.+-+++++||+..++-|+.-+. |+.+.|++. +++.
T Consensus 101 Lilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~ 179 (448)
T COG2271 101 LILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFA 179 (448)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHH
Confidence 8888888888888889999999999999999999999999999999999999999999988888 777788888 8888
Q ss_pred hccccchhhhHHHHHHHHHHHHHHH
Q 014628 359 DHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 359 ~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++. +|+..|++-+++.++..++.+
T Consensus 180 ~~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 180 FHG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred hcc-chhHHHHHHHHHHHHHHHHHH
Confidence 775 588999988887766665544
No 135
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.40 E-value=4.3e-11 Score=102.32 Aligned_cols=215 Identities=12% Similarity=0.095 Sum_probs=135.4
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhh-hhccCCC----CC
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF-IDDNAPV----PQ 77 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~----~~ 77 (421)
..++..++.|.++||+|||+.-+.-+++.+++++ +-..++++.++++|++.|++.+..+.+-.++ +.|+-.. +.
T Consensus 81 Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLfS~FEsW~V~Eh~~~g~~~~~ 159 (354)
T PF05631_consen 81 SSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLFSAFESWMVHEHNKRGFPQEW 159 (354)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHH
Confidence 4567788999999999999999999999998886 4566899999999999999999999888775 4565322 22
Q ss_pred chhHHHHHH-HHHHHHhhhHHHhHHhhhhcchh--HHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhccc
Q 014628 78 KTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSE 154 (421)
Q Consensus 78 r~~~~~~~~-~~~~~G~~~g~~~~~~l~~~~~w--r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 154 (421)
.+..++... ...++-.+.+.+++..+.+..+. ..+|....++.++..++.....+|...+ +++.+
T Consensus 160 L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ENyg~---~~~~~--------- 227 (354)
T PF05631_consen 160 LSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPENYGD---TSSSS--------- 227 (354)
T ss_pred HHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccccCCC---ccccc---------
Confidence 233333333 22333445556666666665544 7888888777666666555444443211 11110
Q ss_pred ccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHH-HHhhHHHHH
Q 014628 155 GSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGPKAGYN 233 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 233 (421)
+..++..+..+.+.++|+++.+.+...++-...+.+. .|.|..-.+
T Consensus 228 ---------------------------------~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~~~ 274 (354)
T PF05631_consen 228 ---------------------------------SLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALDPD 274 (354)
T ss_pred ---------------------------------chHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceecCC
Confidence 0111223446677788999988888777766665555 567765411
Q ss_pred hhCCccchhHHHhhhhHHHHHHhhhhhHHHhh
Q 014628 234 IYHMSNADMMFGGVTIVCGIVGTISGGFILDQ 265 (421)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 265 (421)
...-+... +.+...++.++|+.+..++..+
T Consensus 275 -~~~~P~Gl-IFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 275 -DEELPLGL-IFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred -CCCCCchH-HHHHHHHHHHHHHHHHHHHHhC
Confidence 11112222 2244456667777666554443
No 136
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.39 E-value=1.1e-11 Score=115.30 Aligned_cols=170 Identities=11% Similarity=-0.059 Sum_probs=128.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHh--hCCccchh-HHHhhhhHHHHHHhhhhhHHHhh-hccccchhhHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 279 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 279 (421)
+.++.+.+..++..+.+++...++|.|+.+. .+.+..+. .......+...++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 4455556666777888999999999999887 67775554 44466778889999999999999 7998 77777
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCc---hhhHHHHHHHHHHHhhcccCcchhHHH
Q 014628 280 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
+..+..+..++....++.+...+...+.+.+.+...+.......+.+|++ .|+++.++.+...+. |..+||.+.++
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 77777666666655555555555556667777777778888888888775 488899998777777 99999999999
Q ss_pred hhhccccchhhhHHHHHHHHHHHH
Q 014628 357 LQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 357 l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
+.+..+ |+..|...+...+++.+
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l 186 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLL 186 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHH
Confidence 998766 77788776655444433
No 137
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.39 E-value=1.9e-11 Score=111.96 Aligned_cols=174 Identities=13% Similarity=0.011 Sum_probs=121.6
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhh-ccccchhhHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA 280 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 280 (421)
.+.++......+...+.++++..++|.|+.+..+.++... ...........++.+++|+++||+ ||| +.+..+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence 3445555666677788899999999999998888886555 344556677788899999999999 998 666666
Q ss_pred HHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCc--hhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 281 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.++..+..+++...+ +.....+...+...+.+...+...+++.|.+|++ .|.++.++.+...+. |+.++|.+.+++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence 665555544333222 1122222333333444555566678889999875 799999999888886 999999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHHHHH
Q 014628 358 QDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.+..| |+..|...++..+++.+.++
T Consensus 162 ~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 88766 77888776655544444433
No 138
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.39 E-value=8.6e-12 Score=112.10 Aligned_cols=163 Identities=16% Similarity=0.139 Sum_probs=122.0
Q ss_pred HHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHH
Q 014628 212 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 290 (421)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
..++............|.++.+.++.+..+. ...+...++..++.++.|+++||+||| +.+..+.++..+..+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~ 78 (352)
T PF07690_consen 4 AFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLL 78 (352)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHH
Confidence 3445555566666677756666677665555 445677788999999999999999998 7776666666666444
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHH
Q 014628 291 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 370 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 370 (421)
..+.++.+..++..++.+++.+...+....++.+.+|+++|++++++.+..... |..++|.+.+.+.+..+ |+..+++
T Consensus 79 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~~ 156 (352)
T PF07690_consen 79 LAFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFLI 156 (352)
T ss_dssp HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHHH
T ss_pred hhhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-ccccccc
Confidence 433355557777788888888888899999999999999999999999766665 99999999999997655 7778887
Q ss_pred HHHHHHHHHHH
Q 014628 371 LTSIFFLAAGI 381 (421)
Q Consensus 371 ~~~~~~~~~~~ 381 (421)
.+...++..++
T Consensus 157 ~~~~~~~~~il 167 (352)
T PF07690_consen 157 SAILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHHH
T ss_pred ccchhhhhhhh
Confidence 77776666553
No 139
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.39 E-value=1e-11 Score=114.29 Aligned_cols=175 Identities=15% Similarity=0.064 Sum_probs=120.6
Q ss_pred hhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchh
Q 014628 195 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA 273 (421)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 273 (421)
.+++.+.++|.++...+..++............|.+.++..+ ++.+. .......++..++.++.|+++||++||
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~---- 82 (417)
T PRK10489 8 LDLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQMMTG-STLQVGLSVTLTGGAMFIGLMVGGVLADRYDRK---- 82 (417)
T ss_pred HHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCc----
Confidence 345556678888887777777777777777888888877554 43333 445677788899999999999999998
Q ss_pred hHHHHHHHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhccc
Q 014628 274 FKLLSAATFLGAISCLTA-----FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 348 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ 348 (421)
+.+..+..+........ ...++.+...+..++.+++.+...+.....+.+.+|+++|+++.++.+...+. |..
T Consensus 83 -~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~ 160 (417)
T PRK10489 83 -KLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRL-GSV 160 (417)
T ss_pred -eEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhH-HHH
Confidence 44443333333222211 11234445555555666666666677788888999999999999998655555 889
Q ss_pred CcchhHHHhhhccccchhhhHHHHHHHHH
Q 014628 349 PSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 349 ~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 377 (421)
+||.+.+.+.+..+ +++.+++.+...++
T Consensus 161 ~g~~l~g~l~~~~~-~~~~~~~~~~~~~~ 188 (417)
T PRK10489 161 ISPALGGLLIAAGG-VAWNYGLAAAGTFI 188 (417)
T ss_pred hHHHHHHHHHHHHh-hHHHHHHHHHHHHH
Confidence 99999999988755 66666655544433
No 140
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.36 E-value=3.3e-11 Score=109.87 Aligned_cols=164 Identities=13% Similarity=0.052 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
+.+....++.....+....++|.++++..+.+.....+ .....+...+..++.|+++||++|| +.+..+.....
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~ 87 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRA 87 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHH
Confidence 33445566777777788888898988888888655533 3555667777789999999999998 77777777777
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccch
Q 014628 286 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 365 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 365 (421)
..++.....++.+...+...+.+++.+...+...+.+.+..|+++|+++.|+.+...+. |..+||.+.+++.+ .+ ++
T Consensus 88 ~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~~-~g-~~ 164 (400)
T PRK11646 88 AGFATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLLQ-YD-FR 164 (400)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-hh-HH
Confidence 77666666667766666667777777666777788889999999999999999766666 99999999999984 34 76
Q ss_pred hhhHHHHHHHHHH
Q 014628 366 KTTLALTSIFFLA 378 (421)
Q Consensus 366 ~~~~~~~~~~~~~ 378 (421)
..+++.+...++.
T Consensus 165 ~~f~~~~~~~~~~ 177 (400)
T PRK11646 165 LVCATGAVLFVLA 177 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 7777665554443
No 141
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.34 E-value=3.6e-11 Score=110.33 Aligned_cols=162 Identities=11% Similarity=0.101 Sum_probs=118.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.+....+..+.............|.+. +.++.+..+. ...+...++..++.++.|+++||+||| +.+..+.+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~~~~~~~ 85 (405)
T TIGR00891 12 NAFSAAWLGWLLDAFDFFLVALVLAEVA-GEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRR-----LPMVTSIV 85 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHH
Confidence 3344445555555555566666666654 4567775554 445677788899999999999999998 77776666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+..+.....++.+...+..++.+.+.+...+....++.|..|+++|+++.++.+..... |.++++.+.+.+.+..+
T Consensus 86 ~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~l~~~l~~~~~ 164 (405)
T TIGR00891 86 LFSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAV-GAVVAAQVYSLVVPVWG 164 (405)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC
Confidence 66666666656667777777778888888888888888999999999999999999665555 88899988888887654
Q ss_pred -cchhhhHHHH
Q 014628 363 -NWRKTTLALT 372 (421)
Q Consensus 363 -~~~~~~~~~~ 372 (421)
+|+..+.+.+
T Consensus 165 ~~w~~~f~~~~ 175 (405)
T TIGR00891 165 DGWRALFFISI 175 (405)
T ss_pred ccHHHHHHHHH
Confidence 3666665443
No 142
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.34 E-value=1.5e-11 Score=112.44 Aligned_cols=153 Identities=17% Similarity=0.157 Sum_probs=114.6
Q ss_pred HHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 014628 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 299 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (421)
..+....|. +.+.++.+.... ...+...++..++.++.|++.||+||| +.+..+..+...........++.+.
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGAR-----KTLAVFIVIWGVFTGLQAFAGAYVS 84 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcc-----eeeHHHHHHHHHHHHHHHHHcCHHH
Confidence 344444555 455567665444 445777888899999999999999998 6666666666555555555667777
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
..+..++.+++.+...+....++.|.+|+++|++++++.+..... |..++|.+.+.+.+..+ |+..+...+...++..
T Consensus 85 ~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 162 (399)
T TIGR00893 85 LYILRVLLGAAEAPFFPGIILIVASWFPASERATAVSIFNSAQGL-GGIIGGPLVGWILIHFS-WQWAFIIEGVLGIIWG 162 (399)
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHHHhchH-HHHHHHHHHHHHHHhCC-chHHHHHHHHHHHHHH
Confidence 777888888888888888899999999999999999999666555 88999999998888765 7777776665544444
Q ss_pred HH
Q 014628 380 GI 381 (421)
Q Consensus 380 ~~ 381 (421)
+.
T Consensus 163 ~~ 164 (399)
T TIGR00893 163 VL 164 (399)
T ss_pred HH
Confidence 33
No 143
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.33 E-value=5.2e-11 Score=110.18 Aligned_cols=170 Identities=18% Similarity=0.136 Sum_probs=110.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
++.++...+...........+....|.+ ++. +.++.+. ...+...++..++.+..|+++||++|| +.+..+.
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~~-g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~~ 98 (438)
T TIGR00712 26 WQVFLGIFFGYAAYYLVRKNFALAMPYL-VEQ-GFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAGL 98 (438)
T ss_pred HHHHHHHHHHHHHHHHHhccHHhhhHHH-HHc-CCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHHH
Confidence 3444444444444444444445556654 443 6776555 444677788899999999999999998 5555554
Q ss_pred HHHHHHHHHHHhh----hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 282 FLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 282 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
++..+..+..... .+.+...+..++.+++.+..+++....+.+.+|+++|++++++.+..... |..++|.+.+..
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~~ 177 (438)
T TIGR00712 99 ILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLLG 177 (438)
T ss_pred HHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHHH
Confidence 4444444333222 23334444555666666666777778888999999999999999766666 777788777765
Q ss_pred hhccccchhhhHHHHHHHHHHHH
Q 014628 358 QDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
.+...+|+..|+..+.+.++..+
T Consensus 178 ~~~~~~w~~~f~~~~~~~~i~~~ 200 (438)
T TIGR00712 178 MAWFNDWHAALYFPAICAIIVAL 200 (438)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHH
Confidence 55444588888877766555443
No 144
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.33 E-value=1e-10 Score=109.40 Aligned_cols=176 Identities=11% Similarity=-0.043 Sum_probs=120.8
Q ss_pred hhcch-hHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhh-hccccchhhHH
Q 014628 200 LLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL 276 (421)
Q Consensus 200 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 276 (421)
.+++| .++......++..+.++++..+++.|+.+.++.+.... ..............+++|+++|| +||| +.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~ 90 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RV 90 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HH
Confidence 34555 47777777788888899999999999998888886544 22223333333445689999999 5998 66
Q ss_pred HHHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCc--hhhHHHHHHHHHHHhhcccCcchh
Q 014628 277 LSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+..+.++..+...+....+ +.+...+...+.+.+.+...+....+..+.+|++ .+..+.++.+...+. |..++|.+
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~i 169 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHHH
Confidence 6666665555544444432 3333444445566677766777778888888764 345677877667776 88999999
Q ss_pred HHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 354 VGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 354 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
.|++.+..| |+..|...++...++.+.+
T Consensus 170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 170 TPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 999999876 8788887665544544433
No 145
>PRK10504 putative transporter; Provisional
Probab=99.33 E-value=7.6e-11 Score=110.36 Aligned_cols=168 Identities=14% Similarity=0.108 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++.+.+..++.....+.+..++|.+.++ ++.++... .......++..++.++.|+++||+||| +.+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence 456666676777777777888889998876 66665444 334556677788999999999999998 66665555
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+.....+.....++.+..++..++.+++.+...+.....+.+.+|+++|+++.++.+...+. |..++|.+.|.+.+..+
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence 55554444445566666677777888888877778888889999999999999999766565 88999999999998765
Q ss_pred cchhhhHHHHHHHHHHH
Q 014628 363 NWRKTTLALTSIFFLAA 379 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (421)
|+..|.+......+..
T Consensus 163 -w~~~f~~~~~~~~l~~ 178 (471)
T PRK10504 163 -WHWIFLINIPVGIIGA 178 (471)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 7777776655544433
No 146
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.32 E-value=7.7e-12 Score=112.34 Aligned_cols=127 Identities=18% Similarity=0.158 Sum_probs=117.9
Q ss_pred ccccchhhHHHHhhhhcCCch-HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 2 VGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
++..++.++.+++.||+|||+ .+..+..+..++.+.....++.+.+.+..++.|++.+...+....++.|..|+++|++
T Consensus 222 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (352)
T cd06174 222 LGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLTLASELAPPEARGT 301 (352)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHH
Confidence 356778899999999999999 9999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 128 (421)
.+++.+....+|..+++.+.+.+.+..+|+..+++.+++.++..+..+
T Consensus 302 ~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 302 ASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999999999989999999999988777666554
No 147
>PRK03699 putative transporter; Provisional
Probab=99.32 E-value=1.4e-10 Score=105.84 Aligned_cols=169 Identities=9% Similarity=0.031 Sum_probs=120.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+..+...+..++.......+...+|.+.+ .++.+..+. ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r-----~~~~~~~~ 80 (394)
T PRK03699 7 KLTWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLK-----RQLIFGFA 80 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH-----HHHHHHHH
Confidence 34444445555555555666667777655 467775554 444667788899999999999999998 77776666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+..++....++.+...+...+.+.+.+...+.....+.+.+|+++|+.+.+..+..... |+.++|.+.+.+.+...
T Consensus 81 ~~~i~~~l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~ 159 (394)
T PRK03699 81 LMILAVAGLMFSHSLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSM-AGMIFPIIAAYLLARSI 159 (394)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccc
Confidence 66666655555667776777777778877777777888889999888999999988655555 77788888888776544
Q ss_pred cchhhhHHHHHHHHHHH
Q 014628 363 NWRKTTLALTSIFFLAA 379 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (421)
+|+..+...+...++..
T Consensus 160 gw~~~f~~~~~~~~~~~ 176 (394)
T PRK03699 160 EWYWVYACIGLVYVAIF 176 (394)
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 58777776665544433
No 148
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.31 E-value=8e-11 Score=103.06 Aligned_cols=176 Identities=16% Similarity=0.098 Sum_probs=145.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
...+.+.++.+......+...-.+|...+| ++.+.... ...+.+.++..++.++...+.||+.|| +.+.....
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr-----~lLl~~l~ 86 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERR-----RLLLGLLA 86 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchH-----HHHHHHHH
Confidence 344555666666677777777788888777 55665444 556888899999999999999999999 89999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+..++....++.+..++.=.+.++..+..++....+..+.+|+++|+++.++.+..... +.++|.++..++.|.+|
T Consensus 87 lFi~~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tl-A~v~GvPLGt~ig~~~G 165 (394)
T COG2814 87 LFIVSNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTL-ATVLGVPLGTFLGQLFG 165 (394)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHH-HHHHhccHHHHHHHHhh
Confidence 99999999998999999999999999999999999999999999999999999999655555 88999999999999988
Q ss_pred cchhhhHHHHHHHHHHHHHHHHhhhhc
Q 014628 363 NWRKTTLALTSIFFLAAGIWFVGIFLK 389 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (421)
|+.+|+..+.+.++..+... +.+|
T Consensus 166 -WR~~F~~ia~l~ll~~~~~~--~~lP 189 (394)
T COG2814 166 -WRATFLAIAVLALLALLLLW--KLLP 189 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHHH--HhCC
Confidence 99999988877655554433 3445
No 149
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.31 E-value=1.6e-11 Score=111.56 Aligned_cols=158 Identities=16% Similarity=0.138 Sum_probs=114.3
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH
Q 014628 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (421)
++.......+....|.+ .+.++.+..+. ...+...++..++.++.|+++||+||| +.+..+.++..+..++..
T Consensus 5 ~~~~~~~~~~~~~~~~~-~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~ 78 (379)
T TIGR00881 5 AAYYLVRKNFALAMPYL-VEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG 78 (379)
T ss_pred hHHHHhHHhhhhhhHHH-HHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence 34444555566666654 45567765544 445777888899999999999999999 777777766666666666
Q ss_pred hhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcch-hHHHhhhccccchhhhHHH
Q 014628 293 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~ 371 (421)
..++.+..++..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|. +.+.+.+.. +++..+++.
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~ 156 (379)
T TIGR00881 79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELY-SWHWVFIVP 156 (379)
T ss_pred HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcC-CchhHHHHH
Confidence 6677777777777888888888888899999999999999999998655555 8888884 555555543 466666666
Q ss_pred HHHHHHHH
Q 014628 372 TSIFFLAA 379 (421)
Q Consensus 372 ~~~~~~~~ 379 (421)
+.+.++..
T Consensus 157 ~~~~~~~~ 164 (379)
T TIGR00881 157 GIIAIIVS 164 (379)
T ss_pred HHHHHHHH
Confidence 55544433
No 150
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.31 E-value=8.7e-11 Score=109.26 Aligned_cols=171 Identities=12% Similarity=-0.017 Sum_probs=124.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhh-hccccchhhHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA 280 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~ 280 (421)
.+.++..+...+...+.+++...+++.|+++..+.+.... ...........+..+++|+++|| +||| +.+..+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence 3556666666777888999999999999999888876544 33344444555667789999999 9999 777777
Q ss_pred HHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHHHhccCchhhhhhcccCCc--hhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 281 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.++..+..+......+ .....+...+.+.+.+...+....++.+.+|++ +|+.+.++.+...+. |..++|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence 7766666555544433 222334556667777777888889999999886 457788888777777 989999999999
Q ss_pred hhccccchhhhHHHHHHHHHHHH
Q 014628 358 QDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 358 ~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
.++.| |+..|++..+....+.+
T Consensus 167 ~~~~g-w~~~F~i~~i~~~~~~~ 188 (489)
T PRK10207 167 ADKFG-YSVTYNLCGAGLIIALL 188 (489)
T ss_pred HHhhC-hHHHHHHHHHHHHHHHH
Confidence 99876 87877775544433333
No 151
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.31 E-value=2e-11 Score=111.29 Aligned_cols=125 Identities=14% Similarity=0.111 Sum_probs=103.8
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 84 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 84 (421)
+++.++.|+++||+|||+.+..+.+...+.......+++.+.+++.+++.+++.+...+....+..|..|+ +|++++++
T Consensus 266 i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p~-~~g~~~~~ 344 (393)
T PRK15011 266 IPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGMLYFQDLMPG-QAGSATTL 344 (393)
T ss_pred HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCC-CcchHHHH
Confidence 45678999999999999988887766666555555677888888899999888887777777888999886 59999999
Q ss_pred HHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Q 014628 85 FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 85 ~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++...++|..++|.+++.+.++.||+..|++.+++.++..+..++.
T Consensus 345 ~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 345 YTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999998887776655555443
No 152
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.31 E-value=5e-11 Score=109.15 Aligned_cols=165 Identities=10% Similarity=0.039 Sum_probs=119.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
....+.+.+............| .+++.++.+..+. ...+...++..++.+..|++.||+||| +.+..+.++..
T Consensus 11 ~~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~ 84 (412)
T TIGR02332 11 IFLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWG 84 (412)
T ss_pred HHHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHH
Confidence 3333433443444444445555 5666678776555 445777788899999999999999999 77777777767
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc-----
Q 014628 286 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH----- 360 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~----- 360 (421)
+..+.....++.+.+.+.-++.+++.+...+....++.+.+|+++|++++++.+..... |..+++.+.+++.+.
T Consensus 85 ~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~ 163 (412)
T TIGR02332 85 IASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLMA 163 (412)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCC
Confidence 66666666677777777777888888877777778889999999999999999766665 888999898888752
Q ss_pred cccchhhhHHHHHHHHHH
Q 014628 361 VNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 361 ~g~~~~~~~~~~~~~~~~ 378 (421)
..+|+..|++.+...++.
T Consensus 164 ~~gwr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 164 LKGWQWLFLLEGFPSVIL 181 (412)
T ss_pred ccchhHHHHHHHHHHHHH
Confidence 124888888766554443
No 153
>TIGR00895 2A0115 benzoate transport.
Probab=99.30 E-value=1.7e-11 Score=112.16 Aligned_cols=153 Identities=14% Similarity=0.171 Sum_probs=111.9
Q ss_pred HHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh
Q 014628 217 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (421)
.........+.|.+.++ ++.+.... .......++.+++.++.|+++||++|| +.+..+..+..+..+.....+
T Consensus 30 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~ 103 (398)
T TIGR00895 30 GYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALAT 103 (398)
T ss_pred HHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHcc
Confidence 33344455556665544 66665444 344666788899999999999999998 777666666666665555566
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHH
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 375 (421)
+.+...+..++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+++.+..+ |+..+.+.+...
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~ 181 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIAP 181 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhHH
Confidence 7776777777777777778888899999999999999999999655555 88999999999988765 666676664443
Q ss_pred HH
Q 014628 376 FL 377 (421)
Q Consensus 376 ~~ 377 (421)
.+
T Consensus 182 ~~ 183 (398)
T TIGR00895 182 LL 183 (398)
T ss_pred HH
Confidence 33
No 154
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.30 E-value=1e-10 Score=106.41 Aligned_cols=147 Identities=12% Similarity=-0.012 Sum_probs=104.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
|.++.+.+..++............+....+ .+.++... .......+...+..++.|+++||++|| +.+..+..
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~ 76 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG 76 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence 456666666666666555555555555544 44443333 444667788899999999999999999 77766666
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
+..+..+......+. .+..++.+.+.+...+...+++.|.+|+++|++++|+.+..... +.++||.+.|++.+.
T Consensus 77 ~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~-~~~~Gp~lgG~l~~~ 150 (393)
T PRK11195 77 IKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIA-AILLGTVLGGALADP 150 (393)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 555444433333332 34445677888888888999999999999999999999655554 889999999999985
No 155
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.30 E-value=7.1e-11 Score=107.57 Aligned_cols=155 Identities=15% Similarity=0.064 Sum_probs=114.3
Q ss_pred HHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhh
Q 014628 218 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 296 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (421)
..........|.+.++ ++.+..+. ...+...++..++.++.|++.||+||| +.+..+..+..+..+.....++
T Consensus 19 ~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 19 LGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence 3344444455655444 66665444 444677788899999999999999998 7777777666666666666677
Q ss_pred hHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHH
Q 014628 297 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 376 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 376 (421)
.+...+..++.+++.+...+....++.|..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+...+
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGI 170 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence 777777777778877777788888999999999999999999766665 88899999999888765 7676766655544
Q ss_pred HHHH
Q 014628 377 LAAG 380 (421)
Q Consensus 377 ~~~~ 380 (421)
+..+
T Consensus 171 ~~~~ 174 (385)
T TIGR00710 171 LLSA 174 (385)
T ss_pred HHHH
Confidence 4433
No 156
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.29 E-value=1.6e-10 Score=104.51 Aligned_cols=147 Identities=17% Similarity=0.091 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHH
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
++...+..+........+..+.|.++++.++.++... .......++..++.++.|+++||+||| +.+..+.++.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~ 77 (366)
T TIGR00886 3 LFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLLL 77 (366)
T ss_pred hHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 4555566666666777778888877778888887655 444677888999999999999999998 7777777666
Q ss_pred HHHHHHHHhhh-hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 285 AISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 285 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+..+.....+ +.+...+..++.+.+.+ ...+...++.+.+|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus 78 ~i~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 78 AIPCLWAGLAVQSYSVLLLLRLFIGIAGG-SFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhch-hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 66666665566 66666666666665543 4455677888999999999999998644444 66666666665554
No 157
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.28 E-value=1.2e-10 Score=106.38 Aligned_cols=163 Identities=15% Similarity=0.046 Sum_probs=114.4
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
.................+|.+.++ .+.+.... ...+...++..++.++.|+++||+||| +.+..+.....+..
T Consensus 9 ~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~ 82 (392)
T PRK10473 9 FALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIAS 82 (392)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHH
Confidence 333344444555555677777665 56665444 344666778889999999999999998 77776666666666
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhh
Q 014628 289 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTT 368 (421)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~ 368 (421)
......++.+...+..++.+.+.+...+....++.+.+|+++|+++.++.+..... +..++|.+.+.+.+..+ |+..+
T Consensus 83 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~ 160 (392)
T PRK10473 83 LLCSLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLF 160 (392)
T ss_pred HHHHHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHH
Confidence 55555566665566666667776666777788889999999999999999766555 77888988888777654 76667
Q ss_pred HHHHHHHHHHHH
Q 014628 369 LALTSIFFLAAG 380 (421)
Q Consensus 369 ~~~~~~~~~~~~ 380 (421)
++.+.+.++..+
T Consensus 161 ~~~~~~~~i~~~ 172 (392)
T PRK10473 161 YTMAAMGILVLL 172 (392)
T ss_pred HHHHHHHHHHHH
Confidence 666655444443
No 158
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.27 E-value=1.7e-10 Score=104.87 Aligned_cols=168 Identities=15% Similarity=0.021 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
+.++...+..+............+|.+.++ ++.+..+. ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence 344555555666666666666777776554 66665444 445777889999999999999999998 77777777
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 283 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
+..+..++....++.+.+++.-++.+++.+...+.......+..++++|+++++........ |..++|.+.+++.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence 77777777777778888877778888877766666677778888888999999998655555 88889999999888765
Q ss_pred cchhhhHHHHHHHHHHH
Q 014628 363 NWRKTTLALTSIFFLAA 379 (421)
Q Consensus 363 ~~~~~~~~~~~~~~~~~ 379 (421)
|+..+...+...++..
T Consensus 156 -wr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 156 -WRYTFLLIAVFNIAVL 171 (382)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 7777777666544433
No 159
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.27 E-value=1.6e-10 Score=108.69 Aligned_cols=163 Identities=14% Similarity=0.101 Sum_probs=122.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHH
Q 014628 209 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 287 (421)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 287 (421)
..+..+.............|.+.++ ++.+.... .......++..++.++.|++.||+||| +.+..+..+..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence 3344444445555566677777665 55554443 455677888999999999999999998 7777777777777
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhh
Q 014628 288 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 367 (421)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 367 (421)
.+.....++.+..++..++.+++.+...+....++.+.+|+++|+++.++....... |..++|.+.+++.++.+ |+..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence 666666777777777788888888888888889999999999999999999655555 88999999999998765 7777
Q ss_pred hHHHHHHHHHHH
Q 014628 368 TLALTSIFFLAA 379 (421)
Q Consensus 368 ~~~~~~~~~~~~ 379 (421)
+++.....++..
T Consensus 159 f~~~~~~~~~~~ 170 (485)
T TIGR00711 159 FLINVPIGIIVV 170 (485)
T ss_pred hhhhhHHHHHHH
Confidence 776655544443
No 160
>PRK03545 putative arabinose transporter; Provisional
Probab=99.27 E-value=1.3e-10 Score=105.90 Aligned_cols=147 Identities=13% Similarity=0.066 Sum_probs=110.8
Q ss_pred HHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 014628 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (421)
..+|.+. +.++.++.+. ...+...++..++.+..|++.||+||| +.+..+..+..+..+.....++.+.+.+.
T Consensus 30 ~~~~~l~-~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 103 (390)
T PRK03545 30 GLLSDIA-QSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERR-----KLLIGLFVLFIASHVLSALAWNFTVLLIS 103 (390)
T ss_pred cchHHHH-hHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChH-----HHHHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 3456554 4577776555 334566677788889999999999999 78877777777776666667777777777
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
-++.+.+.+...+....++.+..|+++|++++|+....... |..++|.+.+.+.+..| |+..++..+.+.++..
T Consensus 104 r~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~l~~ 177 (390)
T PRK03545 104 RIGIAFAHAIFWSITASLAIRVAPAGKKAQALSLLATGTAL-AMVLGLPLGRVIGQYLG-WRTTFLAIGGGALITL 177 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHH-HHHHHhhHHHHHHHHhc-HHHHHHHHHHHHHHHH
Confidence 67777777666777788889999999999999999655555 88999999998888765 7778877766554443
No 161
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.27 E-value=4.7e-09 Score=94.14 Aligned_cols=300 Identities=11% Similarity=0.028 Sum_probs=174.5
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+.+.+++.+.+.|+.|.|+.++++...+....+..-+- |-+-+++...+.|+|.+..+..--.++.|+.+++.+.+..+
T Consensus 63 ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~~-N~y~~yfssallG~Gaallw~GqG~ylt~~st~~tie~Nis 141 (461)
T KOG3098|consen 63 FTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLFP-NSYYLYFSSALLGFGAALLWTGQGGYLTSNSTRETIERNIS 141 (461)
T ss_pred HHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHhc-chHHHHHHHHHhhhhHHheecccceehhhcCChhhHHHHHH
Confidence 46788999999999999999999999998877776554 46677889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhc--------chhH-HH----------HHHHHHHHHHHHHHH--HhcccccccccCCcc
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSH--------LNWR-YA----------FWGEAILMLPFAVLA--FVIKPLQLKGFAPAE 142 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~--------~~wr-~~----------f~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~ 142 (421)
+.-+....+.++|..+-..+..+ .+-+ .. ..+.+++..+..+.. ....|.....
T Consensus 142 i~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~~~~----- 216 (461)
T KOG3098|consen 142 IFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSKDVV----- 216 (461)
T ss_pred HHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCccchh-----
Confidence 98888888888876654333211 1111 11 111111111110000 0011110000
Q ss_pred ccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHH
Q 014628 143 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 222 (421)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (421)
..++. .+ ....+..+...+++++++...+....+..++....
T Consensus 217 ~~~~~------------------------------~~--------~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf 258 (461)
T KOG3098|consen 217 NCKSS------------------------------SE--------TSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSF 258 (461)
T ss_pred hhhhh------------------------------cc--------ccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHH
Confidence 00000 00 11122223344556777777666655544444444
Q ss_pred HHHHhhHHHHHh--hCCccch--hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-hhh--
Q 014628 223 YSYWGPKAGYNI--YHMSNAD--MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLS-- 295 (421)
Q Consensus 223 ~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 295 (421)
.....|..+.-. .+.+... .......+++.+++.+..+.+.+|..+...+ ..+.....+-...+++.. ..+
T Consensus 259 ~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~~~li~l~~p~d 336 (461)
T KOG3098|consen 259 WISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIGFLLIHLSFPND 336 (461)
T ss_pred HHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHHHHHHhcccccc
Confidence 444445443322 2222111 1222444566666667777777665543221 333333333333332222 111
Q ss_pred ---------------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 296 ---------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.....+...+.|+.........++++...+ +++|.++.++.- +...++..++-
T Consensus 337 ap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~k-fyq~~~s~v~~ 405 (461)
T KOG3098|consen 337 APLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFK-FYQSVASCVAF 405 (461)
T ss_pred CCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHH-HHHHHHHHHHh
Confidence 2345666777888888888888899999888 777888888874 44443554433
No 162
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.27 E-value=2.4e-10 Score=104.00 Aligned_cols=144 Identities=15% Similarity=0.054 Sum_probs=111.4
Q ss_pred HHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 014628 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (421)
...+|.+.+ .++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+..+.....++.+.+++
T Consensus 40 ~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 113 (394)
T PRK10213 40 VSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLLLI 113 (394)
T ss_pred HhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHHHH
Confidence 334566554 466665544 344667788889999999999999999 7777777777666666666677777777
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHH
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 375 (421)
.-.+.+++.+...+....++.+.+|+++|+++.++.....+. |..++|.+.+.+.+..+ |+..+++.+.+.
T Consensus 114 ~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~ 184 (394)
T PRK10213 114 GRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI-ALVIAAPLGSFLGELIG-WRNVFNAAAVMG 184 (394)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-HHHHHHHHHHHH
Confidence 778888888888888888899999999999999999666665 88999999999998766 777777665443
No 163
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.26 E-value=2.3e-10 Score=105.68 Aligned_cols=158 Identities=12% Similarity=0.083 Sum_probs=114.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHH
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+....+..+.............|.+ .+.++.++.+. ...+...++..++.++.|+++||+||| +.+..+....
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~ 93 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAY 93 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHH
Confidence 3333444444444444444455544 45566665444 445677788899999999999999999 7777777777
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 285 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
.+........++.+.+.+.-.+.+++.+...+....++.+..|+++|+++.++....... |.++++.+.+.+.+..+ |
T Consensus 94 ~~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~~~l~~~l~~~~~-w 171 (426)
T PRK12307 94 SVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI-GNIIAAYFMPSFAEAYG-W 171 (426)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH-HHHHHHHHHHHHcccCC-H
Confidence 776666666677777777778888888877888888899999999999999998655555 88888888888877654 7
Q ss_pred hhhhHHH
Q 014628 365 RKTTLAL 371 (421)
Q Consensus 365 ~~~~~~~ 371 (421)
+..+++.
T Consensus 172 ~~~f~i~ 178 (426)
T PRK12307 172 RAAFFVG 178 (426)
T ss_pred HHHHHHH
Confidence 7777653
No 164
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.26 E-value=2.9e-10 Score=106.74 Aligned_cols=166 Identities=14% Similarity=0.108 Sum_probs=121.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHH
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 284 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 284 (421)
+..+.+..+....-......-+|.+..+ ++.+..+ ......+.++...+.+..|+++||+||| +.+..+..+.
T Consensus 8 ~~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~ 81 (495)
T PRK14995 8 LVIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLF 81 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHH
Confidence 3444444555555566677778888765 5555433 3445667777788889999999999999 8888777777
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhccc-CCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc
Q 014628 285 AISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 363 (421)
.+..+.....++.+..++.-.+.+++.+...+.....+.+.+ |+++|+++.|+....... |..+||.+.+++.++.+
T Consensus 82 ~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g- 159 (495)
T PRK14995 82 GLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY- 159 (495)
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-
Confidence 777777777778887777777788877776666666666665 568999999999655555 99999999999999865
Q ss_pred chhhhHHHHHHHHHHH
Q 014628 364 WRKTTLALTSIFFLAA 379 (421)
Q Consensus 364 ~~~~~~~~~~~~~~~~ 379 (421)
|++.|++...+.++..
T Consensus 160 wr~~f~i~~~~~~~~~ 175 (495)
T PRK14995 160 WGSVFLINVPIVLVVM 175 (495)
T ss_pred hHHHHHHHHHHHHHHH
Confidence 8888777655544433
No 165
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.26 E-value=9.1e-10 Score=96.96 Aligned_cols=308 Identities=14% Similarity=0.046 Sum_probs=166.2
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHH
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
+.-+.+.++.+|+..+.=...+.++..++.++.+++++.+.=+++-++.+++.|........+.. .+++ ...+-+
T Consensus 74 ~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~-~y~~----~~l~~w 148 (402)
T PF02487_consen 74 LVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH-FYGK----SSLSAW 148 (402)
T ss_pred HHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-hcCc----cccccc
Confidence 34456777888887666667777788889999999999998889999999999987777777644 5554 357888
Q ss_pred HHHHHHHhhhHHHhHHhhhhcch--hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCc
Q 014628 86 YMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLND 163 (421)
Q Consensus 86 ~~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (421)
+.+.+.+.++|+..-..+.+ .+ -|..+++...+.++..+..++.+|.........+..... + .+
T Consensus 149 ssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~-------~----~~-- 214 (402)
T PF02487_consen 149 SSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED-------E----AE-- 214 (402)
T ss_pred cCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC-------c----cc--
Confidence 88888888888877665555 44 477888887776666666666665422111100000000 0 00
Q ss_pred ccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc-chh
Q 014628 164 HVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADM 242 (421)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 242 (421)
++...++..+++.+...+ ...++.++..+.++. ....+.+.+++-+....++. |.........++ ...
T Consensus 215 --~~~~~~~~~~~~~~~~~~----~~~~~k~~~~k~Ll~--ymiPL~lVY~aEY~InqGv~---~tl~fp~~~~~~r~~Y 283 (402)
T PF02487_consen 215 --DDLLESETSESKPDSSSK----LSFKEKLKRLKPLLW--YMIPLFLVYFAEYFINQGVA---PTLLFPNSFFSPRDQY 283 (402)
T ss_pred --ccccccccccccccccch----hhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHhchH---HHhcCCccCCCHHHHH
Confidence 000000000000000000 111111222222221 22223333333333333332 222111111121 112
Q ss_pred -HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHH---HHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 243 -MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS---CLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 243 -~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
.+...+.++-++++--...+ |+ |+ . +.+...-.+-.+. -....+.++.|..++.++.-|...|..+...
T Consensus 284 ~~Y~~~YQ~GVFISRSS~~~~--ri--r~--l-wils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt 356 (402)
T PF02487_consen 284 RWYQLLYQLGVFISRSSLPFF--RI--RR--L-WILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT 356 (402)
T ss_pred HHHHHHHHHHHhhhhcceeee--eh--hh--H-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH
Confidence 33445555555544332221 11 21 1 1111111111111 1122234567777777888888888899888
Q ss_pred hhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 319 NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+..+.++.++++|..++|... ....+|-.++.
T Consensus 357 F~~I~~~~~~~~REFslg~vs-vsds~GI~lAg 388 (402)
T PF02487_consen 357 FYRISEEVPPEDREFSLGAVS-VSDSLGILLAG 388 (402)
T ss_pred HHHHHhcCCHHHHHHHHHHHH-HHhhHHHHHHH
Confidence 989999999999999999994 44444655555
No 166
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.26 E-value=8.4e-09 Score=92.66 Aligned_cols=320 Identities=13% Similarity=0.113 Sum_probs=177.0
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh--------h-------hHHHHHHHHHHhhhhhh-hhccchhh
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------F-------DFWSIAICRMLVGVGEA-SFISLAAP 67 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~~~~-~~~~~~~~ 67 (421)
.++.++..|...||..|.+++..+.+.--++..+++.. + ....+++.-.+.|.-.- .......+
T Consensus 51 ~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~ia 130 (432)
T PF06963_consen 51 AILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIA 130 (432)
T ss_pred HHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhhe
Confidence 45678888999999999999877766554433332211 1 12222222223332222 22222333
Q ss_pred hhhccC------CCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccc---c
Q 014628 68 FIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG---F 138 (421)
Q Consensus 68 ~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~---~ 138 (421)
+-.||. +++++.+.++...-.-.+..+++|++.|.+.+..+.+....+.++..++..+.-+++.....+. .
T Consensus 131 vERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l~~VY~~~P~L 210 (432)
T PF06963_consen 131 VERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLLARVYNSVPAL 210 (432)
T ss_pred eccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHh
Confidence 445663 3445667777777777788999999999999988999888888888777776665554221111 0
Q ss_pred CCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHH
Q 014628 139 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 218 (421)
Q Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (421)
..+++.+.... .. ++. +..++.......+...+..+...++++..+++|.+..... ..+.++
T Consensus 211 ~~~~~~~~~~~----------~~----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas~a-lalLY~ 272 (432)
T PF06963_consen 211 AVKKRSSESES----------SS----DEE---SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLASFA-LALLYF 272 (432)
T ss_pred cCCCCCccccc----------cc----ccc---ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHHHH-HHHHHH
Confidence 00111000000 00 000 0000111111111122333444566777778786665444 334444
Q ss_pred HHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-h-
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-S- 295 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~- 295 (421)
..-++...+..|+.+. |.++... .+-....+.++.+.++..++.+|+|..+.-.+ .+..-..+...+....+. .
T Consensus 273 TVLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~--~l~~q~~~L~~~v~~~~~~~~ 349 (432)
T PF06963_consen 273 TVLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLW--SLWWQWVCLALCVVSFWAPGS 349 (432)
T ss_pred HHhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHH--HHHHHHHHHHHHHHHHhcCCC
Confidence 4445566677788876 6665444 33366778889999999999999997632211 111111222222222222 1
Q ss_pred -----hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHh
Q 014628 296 -----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 296 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
+...++....+.-++.-+.-.....+++|.+|+++||..+|..+...+.
T Consensus 350 ~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 350 PFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred CchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 2223333344444444455556677889999999999999999766666
No 167
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.24 E-value=3.1e-10 Score=104.13 Aligned_cols=156 Identities=13% Similarity=0.139 Sum_probs=112.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHH
Q 014628 213 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 291 (421)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (421)
.+.............|.+.++ ++.++.+. ...+...++..++.++.|++.||+||| +.+.....+..+..+..
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~ 97 (406)
T PRK11551 24 ALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRK-----RILIVSVALFGLFSLAT 97 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----hhHHHHHHHHHHHHHHH
Confidence 344444455555666766555 66665544 445677788899999999999999999 67666665555555555
Q ss_pred HhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHH
Q 014628 292 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 371 (421)
...++.+...+..++.+++.+...+....++.|.+|+++|++++++.+..... |..+++.+.+.+.+..+ |+..+++.
T Consensus 98 ~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~ 175 (406)
T PRK11551 98 AQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPF-GGALASVIGVLAAGDAA-WRHIFYVG 175 (406)
T ss_pred HHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHccccC-HHHHHHHH
Confidence 55667777777777888888777778888999999999999999999766555 88888877777766544 66666665
Q ss_pred HHHHH
Q 014628 372 TSIFF 376 (421)
Q Consensus 372 ~~~~~ 376 (421)
+.+.+
T Consensus 176 ~~~~~ 180 (406)
T PRK11551 176 GVGPL 180 (406)
T ss_pred HHHHH
Confidence 54433
No 168
>PRK11043 putative transporter; Provisional
Probab=99.23 E-value=5.4e-10 Score=102.35 Aligned_cols=156 Identities=16% Similarity=0.080 Sum_probs=107.8
Q ss_pred HHHHHHHHHhhHH--HHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh
Q 014628 218 FVIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 294 (421)
Q Consensus 218 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (421)
..+.....+.|.+ ..+..+.++... ...++..++..++.++.|+++||++|| +.+..+..+..+..+.....
T Consensus 17 ~~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~ 91 (401)
T PRK11043 17 LGFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWV 91 (401)
T ss_pred HHHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHh
Confidence 3334444555544 445567765554 444677788899999999999999999 77766666666555555555
Q ss_pred hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
++.+...+...+.+.+.+...+.......+.+++++++...+..+..... +..++|.+.+++.+..+ |+..++..+..
T Consensus 92 ~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~ 169 (401)
T PRK11043 92 ESAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAI 169 (401)
T ss_pred cCHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHH
Confidence 66666666666666665555555567788889888888888887655554 77889999999988765 77777766555
Q ss_pred HHHHHH
Q 014628 375 FFLAAG 380 (421)
Q Consensus 375 ~~~~~~ 380 (421)
.++..+
T Consensus 170 ~~~~~~ 175 (401)
T PRK11043 170 TLLLIL 175 (401)
T ss_pred HHHHHH
Confidence 444433
No 169
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.23 E-value=6.7e-10 Score=103.26 Aligned_cols=174 Identities=13% Similarity=0.042 Sum_probs=126.2
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHH
Q 014628 200 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 279 (421)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 279 (421)
.+|+|.|..+.++..+.+.+......-.+-+..+..+.+...........+..++.++++|.++||++|| ++++.
T Consensus 6 plr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drr-----rili~ 80 (524)
T PF05977_consen 6 PLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRR-----RILIL 80 (524)
T ss_pred cccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccch-----HHHHH
Confidence 4688999998888888888777776666666665543332222334555677788899999999999999 66665
Q ss_pred HHHHHHHHHHHH-----HhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhH
Q 014628 280 ATFLGAISCLTA-----FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 354 (421)
Q Consensus 280 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 354 (421)
+-++..+....+ ....+.+.++++.++.+.+.....|...+.+.+.+|+++...++++.+...+. ..++||.++
T Consensus 81 ~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~ni-ar~iGPalg 159 (524)
T PF05977_consen 81 SQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDLPAANALNSISFNI-ARIIGPALG 159 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHH-HHhccchHH
Confidence 554443322211 12235667777788888888888899999999999999999999999777777 889999999
Q ss_pred HHhhhccccchhhhHHHHHHHHHHHH
Q 014628 355 GVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 355 g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
|.+....| ....|.+-++..++...
T Consensus 160 G~Lva~~G-~~~~f~inalsfl~~i~ 184 (524)
T PF05977_consen 160 GILVAFFG-AAAAFLINALSFLISIL 184 (524)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 99998877 44566665555444433
No 170
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.23 E-value=1.7e-11 Score=113.62 Aligned_cols=123 Identities=15% Similarity=0.174 Sum_probs=100.3
Q ss_pred cccchhhHHHHhhhhc--CCchHHH--HHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 3 GLLVASPIFASLAKSH--NPFRLIG--VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~--Grr~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+.++++++.|+++||. ++|+... .+.++.+++.++..++++++.+++.+++.|++.+...+...+++.|.+|++++
T Consensus 288 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~ 367 (455)
T TIGR00892 288 VDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRF 367 (455)
T ss_pred HHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHH
Confidence 3456778889999984 3443333 33444455556667788999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHhhhhcc-hhHHHHHHHHHHHHHHHH
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 125 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-~wr~~f~~~~~~~~~~~~ 125 (421)
++.+++++....+|..+||.+++.+.+.. +|++.|++.+++.++..+
T Consensus 368 g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 368 SSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred hhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 99999999999999999999999999877 599999999887655444
No 171
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.22 E-value=8.2e-11 Score=102.94 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=125.3
Q ss_pred HHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 014628 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 310 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (421)
++.++.+.... .+.....+...+++++.|++.||++|+ .++..+..+-....+...+....|.+.+.=.+.|.+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33455554443 556778888999999999999999999 677666666666666666667888888888899999
Q ss_pred HHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 014628 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 390 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (421)
.....+..+++++|.+|.++|+++.++.+..... |..+|-+....+.+..+.|++++...+++.++..++.+.....|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9999999999999999999999999999888777 888888888888888888999999999888877777665554454
Q ss_pred c
Q 014628 391 I 391 (421)
Q Consensus 391 ~ 391 (421)
|
T Consensus 214 r 214 (493)
T KOG1330|consen 214 R 214 (493)
T ss_pred c
Confidence 4
No 172
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.22 E-value=9.6e-10 Score=102.15 Aligned_cols=147 Identities=14% Similarity=0.097 Sum_probs=97.2
Q ss_pred HHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh----hhh
Q 014628 223 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL 297 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 297 (421)
+....|.+ .+. +.+..+. ...+...++..++.++.|+++||+|+| +.+..+.++..+..+..... .+.
T Consensus 48 ~~~~~p~l-~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k-----~~l~~~~~~~~i~~~~~~~~~~~~~~~ 120 (452)
T PRK11273 48 FALAMPYL-VEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPR-----VFLPAGLILAAAVMLFMGFVPWATSSI 120 (452)
T ss_pred HHHhhHHH-HHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCc-----hhHHHHHHHHHHHHHHHHhhhcccccH
Confidence 44556654 454 6665555 344677788899999999999999999 67766666555555444332 244
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcc-cCcchhHHHhhhccccchhhhHHHHHHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD-VPSSPLVGVLQDHVNNWRKTTLALTSIFF 376 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~-~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 376 (421)
+..++...+.+++.+...++....+.+.+|+++|++++|+.+..... |. ..+|.+...+.. ..+|+..+++.+...+
T Consensus 121 ~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~l~~~~~~~-~~gw~~~f~i~~~~~~ 198 (452)
T PRK11273 121 AVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNV-GGGLPPLLFLLGMAW-FNDWHAALYMPAFAAI 198 (452)
T ss_pred HHHHHHHHHHHHHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHh-hhhHHHHHHHHHHHH-hccHHHHHHHHHHHHH
Confidence 45555566677777777777777888889999999999998766666 54 445543322322 2357777777665544
Q ss_pred HH
Q 014628 377 LA 378 (421)
Q Consensus 377 ~~ 378 (421)
+.
T Consensus 199 ~~ 200 (452)
T PRK11273 199 LV 200 (452)
T ss_pred HH
Confidence 43
No 173
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.22 E-value=9.9e-11 Score=106.24 Aligned_cols=123 Identities=11% Similarity=0.186 Sum_probs=104.9
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSM 84 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~ 84 (421)
.++.++.|++.||+|||+++.++.++..+..+...+.++.+.+.+.+++.|++.+...+....++.|..|++ +++++++
T Consensus 249 ~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~-~~~~~~~ 327 (375)
T TIGR00899 249 IPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGMLYFQDLMPGR-AGAATTL 327 (375)
T ss_pred HHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcch-hhHHHHH
Confidence 345678899999999999998888777666666667788888888999999999988888888999988764 6799999
Q ss_pred HHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHH
Q 014628 85 FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 85 ~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~ 128 (421)
++....+|..++|.+++.+.+..||+..|++.++..++..++..
T Consensus 328 ~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 328 YTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999887766665544
No 174
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.21 E-value=6.3e-10 Score=104.98 Aligned_cols=158 Identities=12% Similarity=0.131 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHH
Q 014628 205 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 283 (421)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 283 (421)
.+....+..+.............|.+. +.++.++... ...+...++..++.++.|++.||+||| +.+..+.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 94 (496)
T PRK03893 21 AFSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRR-----LAMVISIVL 94 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHH
Confidence 334444444444555555555666554 5577775444 445667788889999999999999998 777777666
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc
Q 014628 284 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 363 (421)
..+..+.....++.+...+..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|.+.+.+.+..+
T Consensus 95 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~- 172 (496)
T PRK03893 95 FSVGTLACGFAPGYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRNKASGFLISGFSI-GAVVAAQVYSLVVPVWG- 172 (496)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhccCC-
Confidence 6666666666667777777777888887777788888999999999999999999655555 88999999999888755
Q ss_pred chhhhHH
Q 014628 364 WRKTTLA 370 (421)
Q Consensus 364 ~~~~~~~ 370 (421)
|+..+.+
T Consensus 173 w~~~f~~ 179 (496)
T PRK03893 173 WRALFFI 179 (496)
T ss_pred HHHHHHH
Confidence 6666554
No 175
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.20 E-value=7.1e-11 Score=110.89 Aligned_cols=132 Identities=8% Similarity=-0.073 Sum_probs=103.2
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh-----hh------hHHHHHHHHHHhhhhhhhhccchhhhhhc
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SF------DFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~-----~~------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
+..++.++.|+++||+|||+.+..+.++..++.++.++ .+ +...+....++.+.......+....++.|
T Consensus 331 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (481)
T TIGR00879 331 VNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSE 410 (481)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhc
Confidence 45678899999999999999999998888777776652 11 23333333333333333345667778899
Q ss_pred cCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 014628 72 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 72 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
.+|+++|++++++......+|.+++|.+.+.+.++.+|++.|++.++++++..++.+++.||.
T Consensus 411 ~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~~~~~~~~ 473 (481)
T TIGR00879 411 IFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFVYFFLPET 473 (481)
T ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHHheecccC
Confidence 999999999999999999999999999999999988999999999988888877777766653
No 176
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.20 E-value=1.5e-09 Score=101.24 Aligned_cols=153 Identities=14% Similarity=0.095 Sum_probs=98.0
Q ss_pred HHHHHHhhHHHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 014628 221 GAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 299 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (421)
+....+.|.+ .+.++.+..+.. ..+...++..++.++.|+++||+|+| +.+..+.++..+..++....++.+.
T Consensus 53 ~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r-----~~~~~~~~~~~~~~~~~~~~~s~~~ 126 (476)
T PLN00028 53 FAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPR-----YGSAFLLMLTAPAVFCMSLVSSATG 126 (476)
T ss_pred HHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 3344444544 455777755543 34556677888999999999999998 6666666555555555555556665
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh----c----cccchhhhHHH
Q 014628 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD----H----VNNWRKTTLAL 371 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~----~----~g~~~~~~~~~ 371 (421)
..+..++.+++.+.. .+...++.+.+|+++|++++|+.+...+. |..+++.+.+.+.+ . ..+|+..|++.
T Consensus 127 l~~~r~l~G~~~~~~-~~~~~~i~~~~~~~~rg~a~g~~~~~~~~-g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~ 204 (476)
T PLN00028 127 FIAVRFFIGFSLATF-VSCQYWMSTMFNGKIVGTANGIAAGWGNL-GGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVP 204 (476)
T ss_pred HHHHHHHHHHHHHhh-HHHHHHHHHhcChhheeHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHH
Confidence 555555566555543 34455678889999999999998655454 66666555554432 1 12477888877
Q ss_pred HHHHHHHHHH
Q 014628 372 TSIFFLAAGI 381 (421)
Q Consensus 372 ~~~~~~~~~~ 381 (421)
+++.++..+.
T Consensus 205 g~l~l~~~l~ 214 (476)
T PLN00028 205 GLLHIIMGIL 214 (476)
T ss_pred HHHHHHHHHH
Confidence 6665544433
No 177
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.19 E-value=7.8e-10 Score=101.18 Aligned_cols=153 Identities=10% Similarity=-0.024 Sum_probs=105.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
++.+....+..++..........++|.+.++ .+.++.+. ...+...++..++.++.|++.||+||| +.+..+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k-----~~l~~~~ 85 (402)
T TIGR00897 12 PLNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPL-----KTMMIGL 85 (402)
T ss_pred CchhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHH
Confidence 4555566666666666666666778888866 56665444 444677788899999999999999998 6666655
Q ss_pred HHHHHHHHHHH---h-hhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcc-cCcchhHHH
Q 014628 282 FLGAISCLTAF---C-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD-VPSSPLVGV 356 (421)
Q Consensus 282 ~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~-~~~~~~~g~ 356 (421)
.+.....+... . ..+.+...+...+.+.+.+...+.....+.+..|+++|++++|+.+...+. |. ..+|.+.++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~g~~~~~~ 164 (402)
T TIGR00897 86 LLWCVGHAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSI-GIGVFGSYYSSY 164 (402)
T ss_pred HHHHHHHHHHHHHhccCccHHHHHHHHHHHHcchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHh
Confidence 55544433221 1 234444455555556655555555666777888999999999999766655 64 568888888
Q ss_pred hhhccc
Q 014628 357 LQDHVN 362 (421)
Q Consensus 357 l~~~~g 362 (421)
+.+..|
T Consensus 165 l~~~~g 170 (402)
T TIGR00897 165 AIPAFG 170 (402)
T ss_pred cccccc
Confidence 888766
No 178
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.19 E-value=2.8e-10 Score=103.39 Aligned_cols=150 Identities=16% Similarity=0.150 Sum_probs=112.4
Q ss_pred HHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHH
Q 014628 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 300 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (421)
.....+|.+.++ ++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+........++.+..
T Consensus 9 ~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~ 82 (377)
T PRK11102 9 MYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQL 82 (377)
T ss_pred HHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 344556666665 56665444 444677788899999999999999998 77777776666666666666677777
Q ss_pred HHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 301 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
.+..++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+...+...++..
T Consensus 83 ~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 159 (377)
T PRK11102 83 IYMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILAA 159 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHH
Confidence 77777777777777777888899999999999999999766555 88999999999988765 6666666555544433
No 179
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.19 E-value=5e-10 Score=101.60 Aligned_cols=153 Identities=13% Similarity=0.154 Sum_probs=106.2
Q ss_pred HHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhH
Q 014628 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 298 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (421)
.+....+.|.+. +.++.+..+. ...+...++..++.+..|+++||+||| +.+..+..+..+..+.....++.+
T Consensus 19 ~~~~~~~~~~~~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r-----~~~~~~~~~~~~~~~~~~~~~~~~ 92 (377)
T TIGR00890 19 VYTWTLLAPPLG-RYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPR-----AVAMLGGILYGLGFTFYAIADSLA 92 (377)
T ss_pred HhhhhhHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCcc-----chhHHhHHHHHHHHHHHHHHHHHH
Confidence 444555566554 4467775554 445777889999999999999999999 777666666666666666677777
Q ss_pred HHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 299 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
.+.+...+.+++.+..++.......+..| ++|+++.++.+..... |..+++++.+.+.+..+ |+..+...+...++.
T Consensus 93 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~ 169 (377)
T TIGR00890 93 ALYLTYGLASAGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGL-GSFILSPLITSVINLEG-VPAAFIYMGIIFLLV 169 (377)
T ss_pred HHHHHHHHHhHHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcch-hHhHHHHHHHHHHhccc-HHHHHHHHHHHHHHH
Confidence 77777777777777666666666666664 6799999998655454 76666667777766544 777777766655444
Q ss_pred HHH
Q 014628 379 AGI 381 (421)
Q Consensus 379 ~~~ 381 (421)
.+.
T Consensus 170 ~~~ 172 (377)
T TIGR00890 170 IVL 172 (377)
T ss_pred HHH
Confidence 433
No 180
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.18 E-value=1.1e-09 Score=99.37 Aligned_cols=147 Identities=10% Similarity=0.030 Sum_probs=100.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
+|.++...+.........+......+.+-++.++.+..+.. +.+++.+...+.++..|++.||+|.| +....+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence 45566655555444444555555555555546888876664 45777888888889999999999998 7776666
Q ss_pred HHHHHHHHHHHhh-----hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHH
Q 014628 282 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 356 (421)
Q Consensus 282 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 356 (421)
++..+..+..... ++.+.+++.-++.+++ +..+++....+.+.+|+++||++.|+.....+. |..+++.+.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 6666655555443 5666666666777765 557777888888999999999999998533333 66555544444
No 181
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.17 E-value=9.8e-10 Score=99.82 Aligned_cols=151 Identities=15% Similarity=0.183 Sum_probs=115.8
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
++.++.+.+..++..........++|.+.++ .+.+..+. ...+...++..++.++.|+++||+||| +.+..+.
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k-----~~~~~~~ 78 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFN-----RSYYLAS 78 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHH-----HHHHHHH
Confidence 3446666777777777788888899999886 46665444 445777788899999999999999998 7776666
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 282 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
++...........++.+.+.+..++.+++.+...+.....+.+..++++|+++.+..+...+. |..++|.+.+.+.+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~ 156 (381)
T PRK03633 79 LIFAAGCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNRGRLLAAYMMVYYL-GTVLGQLLVSKVSTE 156 (381)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHhccccc
Confidence 666666665556677777777777777777777666666777888889999999998665555 889999888888765
No 182
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.17 E-value=2.2e-10 Score=97.53 Aligned_cols=141 Identities=16% Similarity=0.179 Sum_probs=101.4
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhh
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
.+++.+.++..+.++..|.++||+||| ..+..+.+...+..++.....+...+++.=++. ....+..+...+++
T Consensus 72 flGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F~afv~aR~l~-Gi~kgnl~v~rAii 145 (451)
T KOG2615|consen 72 FLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNFAAFVLARFLG-GIFKGNLSVIRAII 145 (451)
T ss_pred hHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hhccCchHHHHHHH
Confidence 455778899999999999999999999 888888877777777666666763333323333 33445667789999
Q ss_pred hcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh---ccccchhhhHHHHHHHHHHHHHHHHhhhhcc
Q 014628 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 390 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (421)
.|.+++++|+.+++..+...+. |.++||.++|++.. ..|.|...+-...++.....-++++..+++|
T Consensus 146 sdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 146 SDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred HhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999999999777776 99999999999987 5666644443333333333323333334554
No 183
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.17 E-value=2.1e-10 Score=104.09 Aligned_cols=122 Identities=15% Similarity=0.048 Sum_probs=108.3
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+++.++.+++.||+|+|+.+.++.++..+..++.+++++.+.+++.++++|++.+...+....++.+. |+++|++..
T Consensus 252 ~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q 330 (382)
T TIGR00902 252 AEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQ 330 (382)
T ss_pred HHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHH
Confidence 3456778899999999999999999999999999999999999999999999999999999999999998 998999999
Q ss_pred HHHH-HHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHH
Q 014628 83 SMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 126 (421)
Q Consensus 83 ~~~~-~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~ 126 (421)
++++ ...++|.++|+.++|.+.+++|+ ..|++.+++.++..++
T Consensus 331 ~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 331 ALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9986 57789999999999999999986 6677777776654433
No 184
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.17 E-value=1.4e-09 Score=99.29 Aligned_cols=151 Identities=11% Similarity=0.034 Sum_probs=103.8
Q ss_pred HHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
........+|.+. +..+.++... ...+...++..++.++.|+++||+||| +.+........+..+.....++.
T Consensus 23 ~~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T PRK11652 23 AQTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHSL 96 (394)
T ss_pred HHHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccH
Confidence 3333334455555 4466665444 444677788899999999999999998 76666666555555555555666
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 377 (421)
+...+...+.+++.+...+.......+.+++++++.+.+..+..... +..++|.+.+.+.+..+ |+..+.+.+...++
T Consensus 97 ~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~ 174 (394)
T PRK11652 97 TVLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGAG 174 (394)
T ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHHH
Confidence 66666666666666555555566677778888899999998655544 88889999999888755 77777766554433
No 185
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.15 E-value=1.3e-09 Score=97.83 Aligned_cols=153 Identities=10% Similarity=-0.030 Sum_probs=104.3
Q ss_pred HHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 297 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (421)
....+...+|.+.++ ++.+..+. ...+...++..++.+..|+++||+||| +.+.................++.
T Consensus 6 ~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~ 79 (368)
T TIGR00903 6 IWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNY 79 (368)
T ss_pred HHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccH
Confidence 344455566666554 67776555 445667788899999999999999987 55544443333332222222456
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 377 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 377 (421)
+..++.-++.+.+.+. ..+......+.+|+++|++++++.+..... |..+++.+.+++.+..| |+..|+..+.+.++
T Consensus 80 ~~l~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~ 156 (368)
T TIGR00903 80 EWLLACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAA 156 (368)
T ss_pred HHHHHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHH
Confidence 6666666677776664 344555668889999999999999655555 99999989898888765 88888776666544
Q ss_pred HHH
Q 014628 378 AAG 380 (421)
Q Consensus 378 ~~~ 380 (421)
..+
T Consensus 157 ~~~ 159 (368)
T TIGR00903 157 GII 159 (368)
T ss_pred HHH
Confidence 443
No 186
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.14 E-value=1.8e-10 Score=108.22 Aligned_cols=131 Identities=9% Similarity=0.019 Sum_probs=98.9
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh--hH-H-HHHHHHHHhhhhhhh-hccchhhhhhccCCCCCc
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DF-W-SIAICRMLVGVGEAS-FISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~-~-~l~~~r~l~G~~~~~-~~~~~~~~i~~~~~~~~r 78 (421)
.+++.++.|+++||+|||++++.+.++.+++.++.+... +. + ....+-++.+.+.+. ..|....++.|.+|+++|
T Consensus 319 ~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 319 NLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 457789999999999999999999999888887765432 11 1 222334444444443 336678999999999999
Q ss_pred hhHHHHHHHHHHHHhhhHHHhHHh------hhhcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 014628 79 TAWLSMFYMCIPTGVALGYVYGGV------VGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 79 ~~~~~~~~~~~~~G~~~g~~~~~~------l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
++++++......+|..+++.+.+. +.+..+|++.|++.++++++..++.+++.||+
T Consensus 399 ~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 460 (479)
T PRK10077 399 GKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPET 460 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHHhccccC
Confidence 999999999999999888665543 34578899999999888777777777666764
No 187
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.12 E-value=3e-09 Score=97.58 Aligned_cols=147 Identities=12% Similarity=0.028 Sum_probs=104.0
Q ss_pred HHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 014628 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (421)
..+|.+. +.++.++... .......++..++.++.|+++||+||| +.+..+.....+..+.....++.+..++.
T Consensus 34 ~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 107 (406)
T PRK15402 34 PGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRR-----PVMLAGVAFFILTCLAILLAQSIEQFTLL 107 (406)
T ss_pred cchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 3444444 4566665444 334667788889999999999999999 77766666666666555556666666666
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
..+.+.+.+...+.....+.|.+|+++|.++.++....... +..++|.+.+.+.+..+ |+..+++.+.+.++..
T Consensus 108 ~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~~-w~~~~~~~~~~~~~~~ 181 (406)
T PRK15402 108 RFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALL-APLLGPLVGAALIHVLP-WRGMFVLFAALAALSF 181 (406)
T ss_pred HHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccC-ccHHHHHHHHHHHHHH
Confidence 66666666655566677888889889999999888555444 77889989898888654 7777776666554443
No 188
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.12 E-value=2.7e-09 Score=97.28 Aligned_cols=146 Identities=14% Similarity=0.089 Sum_probs=113.0
Q ss_pred HHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHH
Q 014628 221 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYG 299 (421)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (421)
......+|...+ .++.+..+. ...+...++..++.+..|++.||+||| +.+..+..+..+..+.....++.+.
T Consensus 26 ~~~~~~lp~i~~-~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r-----~~l~~~~~l~~~~~~~~~~a~~~~~ 99 (393)
T PRK09705 26 TSVGPLLPQLRQ-ASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSER-----RSVAISLLLIAVGALMRELYPQSAL 99 (393)
T ss_pred hccchhHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHCcchHH
Confidence 444556666554 467775554 445777788899999999999999999 8898888888888888888888888
Q ss_pred HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 300 FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
+++.-++.+++.+...+....++.+.+| ++|+.++++.+..... |..+++.+.+++.++..+|+..+.+.+..
T Consensus 100 ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~-g~~~g~~~~~~l~~~~~~w~~~~~~~~~~ 172 (393)
T PRK09705 100 LLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMG-GGGLGAAITPWLVQHSETWYQTLAWWALP 172 (393)
T ss_pred HHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 8888888888888888777888888775 7899999998655555 77888888888888765576665554443
No 189
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.12 E-value=2.8e-09 Score=97.66 Aligned_cols=141 Identities=12% Similarity=0.105 Sum_probs=102.6
Q ss_pred HHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 014628 232 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 310 (421)
Q Consensus 232 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (421)
.+.++.+.... ...++..++..++.+..|+++||+||| +.+..+..+..+..+.....++.+.+++.-++.+.+
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566665444 344667788899999999999999999 777766666666666666667777776666776666
Q ss_pred HHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 311 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
.+...+.......|.+|++++++++++.+..... +..++|.+.+.+.+..+ |+..|++.+...++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~ 184 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAF 184 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHH
Confidence 6544444566777888888999999998666655 88889988888887654 8788877766544443
No 190
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.11 E-value=4.4e-07 Score=82.78 Aligned_cols=226 Identities=14% Similarity=0.061 Sum_probs=134.4
Q ss_pred hhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh----h---------------------------hHHHHHHHHHHhh
Q 014628 7 ASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F---------------------------DFWSIAICRMLVG 55 (421)
Q Consensus 7 ~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~----~---------------------------~~~~l~~~r~l~G 55 (421)
..++.+++++|++|++++-+....+.....++++. + +.|...+.-+...
T Consensus 60 ~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~e 139 (472)
T TIGR00769 60 FMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAE 139 (472)
T ss_pred HHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHH
Confidence 37889999999999999888877777766666554 1 1222233334444
Q ss_pred hhhhhhcc-chhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh--------cchhH----HHHHHHHHHHHH
Q 014628 56 VGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWR----YAFWGEAILMLP 122 (421)
Q Consensus 56 ~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~--------~~~wr----~~f~~~~~~~~~ 122 (421)
+-.....+ .-..+.+|.++.+|-.|..++...+.++|.++++.+..++.+ ...|. ..+.+.++.+++
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~ 219 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLA 219 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccChHHHHHHHHHHHHHHHHHH
Confidence 44444444 667899999999999999999999999999999999888763 11342 333444433333
Q ss_pred HHHHHHhcccccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhc
Q 014628 123 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 202 (421)
Q Consensus 123 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (421)
...+..++ .+.... +++..+ . + + +.+++ +...+..++++.+++
T Consensus 220 ~~~~~~~l-~~~~~~--~~~~~~-~-------------------~-----~--~~~k~-------k~k~~~~es~k~i~~ 262 (472)
T TIGR00769 220 IILLYWWV-NRNVLT--DPRSYN-P-------------------A-----L--KEKKV-------KPKMSTMESLKFLVS 262 (472)
T ss_pred HHHHHHHH-HhcccC--Cccccc-h-------------------h-----h--ccccC-------CCCCCHHHHHHHHHh
Confidence 33333322 111100 000000 0 0 0 00000 112234578899999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-H---HHhhhhHHHHHHhhhhhHHHhhhccc
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-M---FGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
+|.++.+.+...+++...+.+..-......+.+..+.+.. . +....++..++..++.+++.+|+|-+
T Consensus 263 S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 263 SPYILDLALLVIAYGISINLVEVTWKSKLKAQYPSPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 9999988887777777666665544445555553222111 1 22333444455566668888888876
No 191
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.11 E-value=2.4e-09 Score=97.83 Aligned_cols=168 Identities=13% Similarity=0.000 Sum_probs=104.5
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 281 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 281 (421)
+|.+|.+....++.......+..++|.|+.+..+.++.+. ...+...+...++.+..|+++||+||| +.+....
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr-----~~~~~~~ 75 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLK-----KHLLWII 75 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence 4778888888888888888888899999998888886555 445778899999999999999999998 5554333
Q ss_pred HHHHHHHH---HHHhhh-----hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchh
Q 014628 282 FLGAISCL---TAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 282 ~~~~~~~~---~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
........ .....+ ......+..++.+.+.+...+....+..+.. +.++...|......+ +|..++|.+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~-~g~~~g~~~ 152 (396)
T TIGR00882 76 SGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEAYIEKVS--RNSNFEYGKARMFGC-VGWALCASI 152 (396)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHHHHHHhh--hhcccccchhhhhcc-cHHHHHHHH
Confidence 22222111 111111 1111122223344444444455554544432 223445566544444 488889989
Q ss_pred HHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 354 VGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 354 ~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
.|.+.+. +++..|+..+.+.++..+
T Consensus 153 ~g~l~~~--~~~~~f~~~~~~~~~~~~ 177 (396)
T TIGR00882 153 AGILFSI--DPQIVFWLGSGFALILML 177 (396)
T ss_pred Hhhhhcc--CchHHHHHHHHHHHHHHH
Confidence 8888764 466777766655554443
No 192
>TIGR00898 2A0119 cation transport protein.
Probab=99.10 E-value=4.7e-10 Score=106.01 Aligned_cols=128 Identities=12% Similarity=-0.079 Sum_probs=104.7
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhH--HHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+.+.++.+++.||+|||+.+.++.++.+++.++..+.++. +...+.-++.+++.+..++....+..|.+|++.|++++
T Consensus 369 i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~ 448 (505)
T TIGR00898 369 LPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGV 448 (505)
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhH
Confidence 4577889999999999999999999998888887776654 45555667777777778888899999999999999999
Q ss_pred HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 014628 83 SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 83 ~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
++.+....+|.+++|.+.+ + ...++..++.+.++..++.+++.++ .||+.
T Consensus 449 g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~-lpet~ 498 (505)
T TIGR00898 449 GVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLF-LPETK 498 (505)
T ss_pred hHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHc-CcCCC
Confidence 9999999999999999988 4 4456778888888877777666554 47643
No 193
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.10 E-value=4.9e-09 Score=95.79 Aligned_cols=145 Identities=9% Similarity=0.021 Sum_probs=107.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
..+....+...+.........|.+ ++.++.+..+. ...+...++..++++..+++.||+|+| +.+..+..+..
T Consensus 6 ~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~~ 79 (410)
T TIGR00885 6 ALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLYA 79 (410)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHH
Confidence 344444555555555555666765 56677776555 445777889999999999999999999 77777776666
Q ss_pred HHHHHHHh---hhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 286 ISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 286 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
...++... .++.+.+++..++.+.+.+...+..+.++.+..|++++++..++.+...+. |..++|.+.+.+.
T Consensus 80 ~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~ 154 (410)
T TIGR00885 80 LGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 65554332 235666677777888888888888888888888889999999999766666 8899998888775
No 194
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.09 E-value=1.2e-08 Score=91.31 Aligned_cols=129 Identities=13% Similarity=0.043 Sum_probs=105.6
Q ss_pred HHhhHHHHHhhCCccch-h-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 014628 225 YWGPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 302 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (421)
+..| ++.+.++.+..+ . .+......+..+..+.+|+++||+|.| +.+....+...+...+..+.++...+.+
T Consensus 47 ~a~p-~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i 120 (511)
T TIGR00806 47 FITP-YLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQL 120 (511)
T ss_pred HHHH-HHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344 556678888766 4 445677788899999999999999999 8888888887777777777778888888
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.-++.|.+.+... ....++..-+|+++|+++.|+.+..... |.++++++.+++ ...|
T Consensus 121 ~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll-~s~g 177 (511)
T TIGR00806 121 MEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLL-VTLG 177 (511)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH-HhcC
Confidence 8889999998888 8899999999999999999999766666 999999898884 4444
No 195
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.09 E-value=3e-09 Score=89.41 Aligned_cols=310 Identities=10% Similarity=-0.011 Sum_probs=199.7
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
+.+.-.+.=.+.|..--|++++.-.+.......+.-+.++.+.+=+.-+..|...+ ...+-++++-+..+|+++.++.+
T Consensus 55 YLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~ 133 (433)
T KOG3810|consen 55 YLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTG 133 (433)
T ss_pred HHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHH
Confidence 34455566678899999999988888888888888999999999999999999887 45678899999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhc--chhHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhcccccccccC
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNL 161 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~--~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (421)
...++.-.|...|..++..+++. .++...-.+.-....+..+..++ +|..++..-..+++++. .
T Consensus 134 y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~f-LP~v~rSl~f~~~~~~~---------~---- 199 (433)
T KOG3810|consen 134 YCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALF-LPRVKRSLYFHRLEDKI---------S---- 199 (433)
T ss_pred HhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhh-CCCCchhhhhhcccccc---------e----
Confidence 99999999999999999888754 23344333333222233333333 34321110000000000 0
Q ss_pred CcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch
Q 014628 162 NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD 241 (421)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (421)
..+.++.. ++.+...-........++++++..++|.+..-.+-+.+...+++-...|....-++.- .++..
T Consensus 200 ----v~~~e~~~----~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~ 270 (433)
T KOG3810|consen 200 ----VGDLEEMN----PQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPAN 270 (433)
T ss_pred ----eccchhcC----ccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchh
Confidence 00000000 0000000011234455567777888999888888888888888777777666555543 22212
Q ss_pred h---HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch
Q 014628 242 M---MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 318 (421)
Q Consensus 242 ~---~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (421)
. ..-++..+.++++.+..|.+--++.|+.. .++..+...-+...+.+...++.|...+...+.........+..
T Consensus 271 vyNG~veAv~tlLGa~~~~~~g~l~i~w~r~g~---~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA 347 (433)
T KOG3810|consen 271 VYNGAVEAVSTLLGAIAALAAGYLNINWNRWGD---LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIA 347 (433)
T ss_pred hhcCHHHHHHHHHHHHHHHHHHheeeccchhhH---HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHH
Confidence 1 11244556666777777777555444321 34455555556666666667788887777777777777777777
Q ss_pred hhhhhcccCCchhhHHHHHHHH
Q 014628 319 NYVCLHSVKPSLRALSMAISTV 340 (421)
Q Consensus 319 ~~~~~~~~~~~~~~~~~g~~~~ 340 (421)
...++.....+.-|...|+++.
T Consensus 348 ~~~iA~nL~~e~~gLvFGiNTF 369 (433)
T KOG3810|consen 348 TFQIARNLSSELFGLVFGINTF 369 (433)
T ss_pred HHHHHHhhhhhhheeeeehHHH
Confidence 7777888888888999998743
No 196
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.08 E-value=1.3e-09 Score=101.79 Aligned_cols=150 Identities=14% Similarity=0.049 Sum_probs=101.7
Q ss_pred HHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH-----hhh
Q 014628 222 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-----CLS 295 (421)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 295 (421)
.+....|.+.+ .++.+..+. ...+...++..++.++.|+++||+|+| +.+..+.++.++...... ..+
T Consensus 47 ~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~ 120 (467)
T PRK09556 47 NFKAAQNDMIS-TYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTK-----QFLPFLLILSAICMLGFGASLGSGSV 120 (467)
T ss_pred ChhhhhHHHHH-hcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCcc-----chHHHHHHHHHHHHHHHHHHHhcccc
Confidence 34444665544 466665554 445667788899999999999999999 665554444333332222 235
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc--ccchhhhHHHHH
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALTS 373 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~~ 373 (421)
+.+..++.-++.+++.+...+....++.+.+|+++|++++|+.+..... |.++++.+..++.+.. ++++..+.+.+.
T Consensus 121 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~l-G~~l~~~i~~~~~~~~~~~~~~~~f~~~g~ 199 (467)
T PRK09556 121 SLGLMIALWALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNL-GGAGAGGVALWGANYFFDGHVIGMFIFPSI 199 (467)
T ss_pred hHHHHHHHHHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccch-hhhHHHHHHHHHHHhhccCcchhHHHHHHH
Confidence 6666777777788888888888889999999999999999999655555 8888887776665542 235555555454
Q ss_pred HHHHH
Q 014628 374 IFFLA 378 (421)
Q Consensus 374 ~~~~~ 378 (421)
..++.
T Consensus 200 ~~~~~ 204 (467)
T PRK09556 200 IALII 204 (467)
T ss_pred HHHHH
Confidence 44333
No 197
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.08 E-value=3.8e-09 Score=99.51 Aligned_cols=110 Identities=9% Similarity=0.048 Sum_probs=83.8
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhh------hHHHHHHHHHHHHHHHhccC
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS------LYGFLALFTVGELLVFATQA 316 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~ 316 (421)
.+.....++.+++.++.|++.||+||| +.+....++..+..++.....+ .+.+++.-++.+++.+...+
T Consensus 60 ~~~~~~~ig~~ig~~~~g~l~d~~Grr-----~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~ 134 (502)
T TIGR00887 60 AVNGSASIGTLAGQLFFGWLADKLGRK-----RVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYP 134 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccH-----HHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhH
Confidence 455677788999999999999999999 6666665555554444333332 45566777788888888889
Q ss_pred chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 317 PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
....+..|.+|++.|+++.++.+..... |..+++.+...+.
T Consensus 135 ~~~~~~~e~~p~~~Rg~~~~~~~~~~~~-g~~~g~~~~~~~~ 175 (502)
T TIGR00887 135 LSAIITSEFATKKWRGAMMAAVFAMQGF-GILAGAIVALIVL 175 (502)
T ss_pred HHHHHHHHhcChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 9999999999999999999999655555 8777776665543
No 198
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.05 E-value=8.5e-09 Score=92.08 Aligned_cols=187 Identities=10% Similarity=0.013 Sum_probs=141.6
Q ss_pred hhhhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchh
Q 014628 194 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNA 273 (421)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 273 (421)
+.+...++.++....+++...+++.+.....+++=-++++..+.+........+...+.++.-++.+++.+|+|+-
T Consensus 361 ~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv---- 436 (618)
T KOG3762|consen 361 LADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV---- 436 (618)
T ss_pred HHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc----
Confidence 3444456677776666666666666666666666556777665443222333455567788888999999999998
Q ss_pred hHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchh
Q 014628 274 FKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+++..+......=++......++|..+..-++-+...+..+....+++....||+.+.++.++.......+|-.+|+++
T Consensus 437 -~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslI 515 (618)
T KOG3762|consen 437 -NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLI 515 (618)
T ss_pred -ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhh
Confidence 7777777777777777777889999998999999999999999999999999999999999999888888899999999
Q ss_pred HHHhhhccccchhhhHHHHHHHHHHHHHHHHhh
Q 014628 354 VGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 354 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
+|.+.+.++. ...|..+++.+++..+..+...
T Consensus 516 GG~~v~~fg~-~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 516 GGFVVERFGA-RTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred hhhhheeehh-HHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999884 4667666666555555544444
No 199
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.03 E-value=3.2e-09 Score=81.41 Aligned_cols=126 Identities=17% Similarity=0.208 Sum_probs=94.4
Q ss_pred hhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhccc
Q 014628 247 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 326 (421)
Q Consensus 247 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (421)
...++..++.+..+++.||++|| +.+.................++.+.......+.+.+.+...+.......|..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34567788899999999999998 6666665555555555555566666666777777777777788888899999
Q ss_pred CCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 327 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 327 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
|+++|+++.++.+..... |..++|.+.+.+.+..+ ++..+.......+...
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 131 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAF 131 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHH
Confidence 999999999999766665 88999999999988754 6566666555444433
No 200
>PRK10133 L-fucose transporter; Provisional
Probab=99.03 E-value=2.1e-08 Score=92.51 Aligned_cols=145 Identities=9% Similarity=0.029 Sum_probs=104.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
..+.+.++...+.........|.+ ++.++.++.+. .......++..++.+..|++.||+|+| +.+..+..+..
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r-----~~l~~g~~~~~ 102 (438)
T PRK10133 29 ALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYK-----AGIITGLFLYA 102 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHH
Confidence 334444555566666677778876 66778876555 444677788999999999999999999 77777776666
Q ss_pred HHHHHH---HhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 286 ISCLTA---FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 286 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
+..++. ...++.+.+++..++.+.+.+...+..+.++.+..+++.+...+++.+..... |..++|.+.+.+.
T Consensus 103 ~~~~l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~-G~~~g~~~g~~l~ 177 (438)
T PRK10133 103 LGAALFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSF-GAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 665543 23456777777788888888888888888888765556666678887655554 8888887766544
No 201
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.03 E-value=7e-10 Score=101.33 Aligned_cols=118 Identities=8% Similarity=0.006 Sum_probs=93.4
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHH--hhhhh--hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCc
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQK 78 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 78 (421)
+..++.++.|+++||+|||+.+..+..+..+.. +...+ .++.+.+....++.|++.+...+...+++.|.+|+++|
T Consensus 267 ~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 346 (394)
T TIGR00883 267 LFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVR 346 (394)
T ss_pred HHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccce
Confidence 456788899999999999998775554444333 22222 24667777888999999988999999999999999999
Q ss_pred hhHHHH-HHHHHHHHhhhHHHhHHhhhhcch-hHHHHHHHHHHH
Q 014628 79 TAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILM 120 (421)
Q Consensus 79 ~~~~~~-~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~ 120 (421)
++++++ ++.+..+|..++|.+++.+.++.| |++.++...+..
T Consensus 347 ~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~ 390 (394)
T TIGR00883 347 YTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALA 390 (394)
T ss_pred eeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHH
Confidence 999998 456677899999999999999888 988877776543
No 202
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.02 E-value=2.2e-09 Score=100.26 Aligned_cols=142 Identities=13% Similarity=0.145 Sum_probs=102.4
Q ss_pred hCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh--hhhHHHHHHHHHHHHHH
Q 014628 235 YHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLV 311 (421)
Q Consensus 235 ~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 311 (421)
++.+.... .+.+...++..++.+..|++.||+|+| +.+..+.++..+..++.... .+.+..++.-++.|++.
T Consensus 71 ~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~ 145 (465)
T TIGR00894 71 FKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFK-----WSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQ 145 (465)
T ss_pred CCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcc-----hhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhc
Confidence 34443333 344667788999999999999999998 66666655555444433222 23445566667777888
Q ss_pred HhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHH
Q 014628 312 FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 382 (421)
+...+....++.+.+|+++|++++++.+..... |.+++|.+.+.+.+...+|+..|++.++..++..+++
T Consensus 146 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~ 215 (465)
T TIGR00894 146 GSVSPATHKIIVKWAPPKERSRLLGMSTSGFQL-GTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLW 215 (465)
T ss_pred ccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHH
Confidence 888888889999999999999999999665665 8899999999998874348788887766654444333
No 203
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.01 E-value=3.9e-09 Score=97.14 Aligned_cols=128 Identities=16% Similarity=0.245 Sum_probs=111.7
Q ss_pred cccchhhHHHHhhhhcCCc--hHHHHHHHHHHHHHhhhhh--------hhhHHHHHHHHHHhhhhhhhhccchhhhhhcc
Q 014628 3 GLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr--~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
..++|++++|++.||+|.| +++..+++++.+..+...+ .++-+.+.+.-++.|+..|..++...++.+|.
T Consensus 329 ~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~L 408 (477)
T PF11700_consen 329 VAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRL 408 (477)
T ss_pred HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHh
Confidence 3567999999999999999 8999998888776666665 67888999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcch-hHHHHHHHHHHHHHHHHHHHhc
Q 014628 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
.|+++.+..+|++....-....+||++.+.+.+..| -|+.+....++.++..++.++.
T Consensus 409 iP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 409 IPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred CCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999998776 8888888877766655555443
No 204
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.00 E-value=2.1e-08 Score=91.83 Aligned_cols=159 Identities=14% Similarity=0.056 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhh-----ccccchhhHHHHHHHHHHHHH
Q 014628 213 YIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAIS 287 (421)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~ 287 (421)
++.+.........-+|.|+++. |.+..+..+....... .+..++.|+++||+ |||+ +++..+....++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~-~~~~~l~g~~~Dr~~~~~~g~rr----~~l~~~~~~~~l~ 81 (402)
T PRK11902 8 GFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA-YIFKFLWAPLMDRYTPPLLGRRR----GWLLLTQVGLAAS 81 (402)
T ss_pred HHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCcch----hHHHHHHHHHHHH
Confidence 4556666777778899999986 6665555333222222 57789999999999 6652 3455545444444
Q ss_pred HHHHHhh---hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 288 CLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 288 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
....... .+.+......++.+++.....++..+++.+..|+++|+++.++....... |.++++.+.+.+.+...+|
T Consensus 82 ~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~-g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 82 IAAMAFCPPHAALWPLAGLAVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRL-AMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHH-HHHHHhHHHHHHHhcccCH
Confidence 3333333 23444444445556666667777888999999999999999999654444 8888888888888864458
Q ss_pred hhhhHHHHHHHHHH
Q 014628 365 RKTTLALTSIFFLA 378 (421)
Q Consensus 365 ~~~~~~~~~~~~~~ 378 (421)
+..+++.+...++.
T Consensus 161 ~~~f~i~a~~~l~~ 174 (402)
T PRK11902 161 GNTYLLMAGLMLAG 174 (402)
T ss_pred HHHHHHHHHHHHHH
Confidence 88888777655443
No 205
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.00 E-value=1.4e-08 Score=105.58 Aligned_cols=163 Identities=13% Similarity=-0.020 Sum_probs=106.2
Q ss_pred HhhcchhHHHHHHHHHHHHHHHHHHHH----HhhHHHHHhhCCcc-chh-HHHhhhhHHHHHHhhhhhHHHhhhccccch
Q 014628 199 VLLQEKVYVVNVLGYIAYNFVIGAYSY----WGPKAGYNIYHMSN-ADM-MFGGVTIVCGIVGTISGGFILDQMGATISN 272 (421)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 272 (421)
.+++++.++.+....++..+..+.... +....+.+..+.+. ... ...++..+..++..+++|+++||++||
T Consensus 6 ~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk--- 82 (1140)
T PRK06814 6 YLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKA--- 82 (1140)
T ss_pred hhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHH---
Confidence 355666666666655554444332222 11211211111111 112 233556677889999999999999998
Q ss_pred hhHHHHH---HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccC
Q 014628 273 AFKLLSA---ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 273 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
+++.. ..+......+.....++.+.++++.++.+.+.+...+...+++.+.+++++++.++|+.+..... |.++
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~i-g~~i 159 (1140)
T PRK06814 83 --KLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFI-AILL 159 (1140)
T ss_pred --HHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHH-HHHH
Confidence 54321 22222222222233367777788888888888889999999999999999999999999766666 9999
Q ss_pred cchhHHHhhhccccchhhh
Q 014628 350 SSPLVGVLQDHVNNWRKTT 368 (421)
Q Consensus 350 ~~~~~g~l~~~~g~~~~~~ 368 (421)
||.+.|++.+..+ +...+
T Consensus 160 gp~l~g~l~~~~~-~~~~~ 177 (1140)
T PRK06814 160 GTIIGGLATISGN-FVILV 177 (1140)
T ss_pred HHHHHHHHHhccc-cHHHH
Confidence 9999999998755 65555
No 206
>PRK09952 shikimate transporter; Provisional
Probab=99.00 E-value=1.9e-08 Score=92.99 Aligned_cols=162 Identities=16% Similarity=0.149 Sum_probs=100.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhHHHHHhh--CCccchhHHH-----hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHH
Q 014628 207 VVNVLGYIAYNFVIGAYSYWGPKAGYNIY--HMSNADMMFG-----GVTIVCGIVGTISGGFILDQMGATISNAFKLLSA 279 (421)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 279 (421)
....+.+++-..-...+....|.+..+.+ +.++...... .+..++..++.++.|++.||+||| +.+..
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr-----~~l~~ 99 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPAMGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRK-----RMLML 99 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccH-----HHHHH
Confidence 33333444433334444444554444433 3443322221 223355678888899999999999 77777
Q ss_pred HHHHHHHHHHHHHhhhhhH--------HHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 280 ATFLGAISCLTAFCLSSLY--------GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+..+..+..++....++.. .+++.-++.|++.+..++....++.|..|+++|+...+..+..... |..+++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~-G~~l~~ 178 (438)
T PRK09952 100 TVWMMGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGV-GLLLST 178 (438)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHH-HHHHHH
Confidence 7777777666666655543 2444556677777777788888999999999999998888544444 766666
Q ss_pred hhHHHhhhcc-------ccchhhhHHHHHH
Q 014628 352 PLVGVLQDHV-------NNWRKTTLALTSI 374 (421)
Q Consensus 352 ~~~g~l~~~~-------g~~~~~~~~~~~~ 374 (421)
.+...+.... -+|+..|++.+..
T Consensus 179 ~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 179 GLVSLISMMTTDEQFLSWGWRIPFLFSIVL 208 (438)
T ss_pred HHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence 5555544221 2377777665443
No 207
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=98.99 E-value=1.3e-08 Score=106.08 Aligned_cols=155 Identities=10% Similarity=0.033 Sum_probs=108.2
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch---hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHH
Q 014628 200 LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKL 276 (421)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 276 (421)
.++++.++.+++..++..+........+..+....++.+... ....++..++.+++.++.|+++||+||| +.
T Consensus 5 ~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk-----~~ 79 (1146)
T PRK08633 5 LLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKN-----RV 79 (1146)
T ss_pred hhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHH-----HH
Confidence 456677777776666655555444444444444444444322 2333566777889999999999999998 66
Q ss_pred HHHHHHHHHHHHHH---HHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchh
Q 014628 277 LSAATFLGAISCLT---AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 353 (421)
Q Consensus 277 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 353 (421)
+..+.++..+..++ ....++.+.+++..++.+++.+...+....++.+.+|+++|++++|+....... |.++++.+
T Consensus 80 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-g~~lg~~l 158 (1146)
T PRK08633 80 IRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENLSRANGLLEAFTIV-AILAGTAL 158 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccchhhhhHHHHHHHH-HHHHHHHH
Confidence 66555443333222 223345666777777788888888888899999999999999999999666555 98999999
Q ss_pred HHHhhhc
Q 014628 354 VGVLQDH 360 (421)
Q Consensus 354 ~g~l~~~ 360 (421)
.+++.+.
T Consensus 159 ~~~l~~~ 165 (1146)
T PRK08633 159 FSFLFES 165 (1146)
T ss_pred HHHHHHh
Confidence 9998875
No 208
>PTZ00207 hypothetical protein; Provisional
Probab=98.98 E-value=2.4e-08 Score=93.45 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=96.4
Q ss_pred HHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh----
Q 014628 219 VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 294 (421)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 294 (421)
..+.+..+.|. +++.++.+..+.....-.+.......+..|++.||+|+| +.+..+.++..++.++....
T Consensus 42 ~~y~fsv~s~~-L~~~lgls~~~l~~i~svg~~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 42 FMYAFNLISGA-MQARYNLTQRDLSTITTVGIAVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHHH-HHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 34455555665 466688876554322111222234556789999999999 77777777766666555544
Q ss_pred --hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhccc-CcchhHHHhhhccccchhhhHHH
Q 014628 295 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV-PSSPLVGVLQDHVNNWRKTTLAL 371 (421)
Q Consensus 295 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~-~~~~~~g~l~~~~g~~~~~~~~~ 371 (421)
.+.+.+.+..++.+.+.+...+.....+.+.+ |++||.+.|+.....+. |++ +++...+++.+ ++...+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l 190 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL 190 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 35666666666777776666666666677766 57899999999777776 665 45545555443 244556666
Q ss_pred HHHHHHHHHHHH
Q 014628 372 TSIFFLAAGIWF 383 (421)
Q Consensus 372 ~~~~~~~~~~~~ 383 (421)
+...++..++..
T Consensus 191 ~vl~~vv~ll~~ 202 (591)
T PTZ00207 191 MSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHH
Confidence 555544444433
No 209
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.97 E-value=9.6e-09 Score=88.36 Aligned_cols=133 Identities=14% Similarity=0.098 Sum_probs=112.6
Q ss_pred HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhh
Q 014628 244 FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCL 323 (421)
Q Consensus 244 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (421)
+.+...+.+++.+++.|.+.||+|+| ..++++..+.....+++.+.++.+..++.=.+-+.+.........++++
T Consensus 111 LFaskA~~qllvnp~~G~l~~~iGy~-----ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsglamlA 185 (464)
T KOG3764|consen 111 LFASKALVQLLVNPFFGNLIDRIGYK-----IPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSGLAMLA 185 (464)
T ss_pred HHHHHHHHHHHhcccchhhHHHhccc-----cHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhhHHHHH
Confidence 33566788899999999999999999 7778888778777788877788887777888888898888899999999
Q ss_pred cccCCc-hhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 324 HSVKPS-LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 324 ~~~~~~-~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+.+|++ .|++++|+.-.+... |-.+||+++|.++|..| +..+|+++++++++-..+-+
T Consensus 186 d~f~~d~er~~vmGialgfisl-G~lvgPpfGGilYe~~G-k~aPFlVL~~v~Lld~~L~l 244 (464)
T KOG3764|consen 186 DVFPEDNERGSVMGIALGFISL-GVLVGPPFGGILYEFAG-KSAPFLVLAIVLLLDGALQL 244 (464)
T ss_pred HHcccchhhhHHHHHHHHHHhc-cceecCCcccchHhhcC-CcCcHHHHHHHHHHHHHHHH
Confidence 999986 689999999666665 99999999999999987 77999999888777666554
No 210
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=98.97 E-value=2.8e-09 Score=98.92 Aligned_cols=108 Identities=18% Similarity=0.154 Sum_probs=92.2
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh-hhHHHHHHHHHHhhhhhhhhccchhhhhhccCC------
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAPFIDDNAP------ 74 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~------ 74 (421)
++.+++.+++++++||+|+|+++..+.++..++.++..+. ++.+.+++..++.|++.+...+...++++|..+
T Consensus 268 i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (437)
T TIGR00792 268 VAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKT 347 (437)
T ss_pred HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence 3456788999999999999999999998888887777665 466777788899999999889999999998865
Q ss_pred -CCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchh
Q 014628 75 -VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 75 -~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 109 (421)
++++|..+++.+....+|..+++.+.+.+.+..||
T Consensus 348 ~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 348 GVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 45679999999999999999999999999876665
No 211
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.97 E-value=4.5e-08 Score=91.18 Aligned_cols=152 Identities=16% Similarity=0.112 Sum_probs=110.7
Q ss_pred HHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 014628 225 YWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 304 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (421)
.-++....+.++ ++....+.....++..++.++.|+++|.+||| ...+.+.++..++.+.....++...++...
T Consensus 65 ~~l~~I~~diG~-~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~i~g~~l~vvG~Iv~atA~~~~~~iag~ 138 (599)
T PF06609_consen 65 SILPYINADIGG-SDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFFIIGSLLGVVGSIVCATAQNMNTFIAGM 138 (599)
T ss_pred HHHHHHHHhcCC-CccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHHHHHHHHHHhHHHHhhcCCcHHHHHHHH
Confidence 344555555544 44445566667788888999999999999999 888999999999998888888888888888
Q ss_pred HHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHH
Q 014628 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
.+.+.+.+... .....+.|..|.+.|..+.++.. .........+|.+...+... ++|++.+++..+...++.+..++
T Consensus 139 ~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~-~~~i~~~~~~~~ia~~~~~~-~~WRw~~~~~~i~~~i~~vl~~~ 215 (599)
T PF06609_consen 139 VLYGVGAGVQE-LAALAISELVPNKWRGLGLAIAS-IPFIITTWISPLIAQLFAAH-SGWRWIFYIFIIWSGIALVLIFF 215 (599)
T ss_pred HHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHH-HHHHhhhcccHHHHHHhccC-CCcchHHHHHHHHHHHHHHHHHH
Confidence 88888765443 34556889999999988887774 44444555677666555443 56999998887766555544443
Q ss_pred h
Q 014628 385 G 385 (421)
Q Consensus 385 ~ 385 (421)
.
T Consensus 216 f 216 (599)
T PF06609_consen 216 F 216 (599)
T ss_pred H
Confidence 3
No 212
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=98.97 E-value=4.9e-09 Score=95.27 Aligned_cols=118 Identities=15% Similarity=0.142 Sum_probs=99.9
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHH
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 82 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~ 82 (421)
+..+..++.|++.||+|+|+.+..+.++.+++.++.+++++.+.+++..++.|++.+...+....++.+. +++++++..
T Consensus 252 ~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~ 330 (382)
T PRK11128 252 AEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQ 330 (382)
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHH
Confidence 3456678899999999999999999999999888888899999999999999999998888888888887 566678889
Q ss_pred HHHH-HHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHH
Q 014628 83 SMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 122 (421)
Q Consensus 83 ~~~~-~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 122 (421)
+.+. ....+|..+||.++|.+.+.+|+ ..|+..+++.++
T Consensus 331 ~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~ 370 (382)
T PRK11128 331 ALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALP 370 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHH
Confidence 9886 55678889999999999999887 466666655443
No 213
>PRK11010 ampG muropeptide transporter; Validated
Probab=98.96 E-value=5.9e-08 Score=90.89 Aligned_cols=172 Identities=14% Similarity=0.022 Sum_probs=112.5
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhh-----ccccchhhH
Q 014628 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFK 275 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~ 275 (421)
.++|+...+....+............+|.++.+. +.+..+.......... .++.++.+.++||+ |||+ .
T Consensus 9 ~~~~~~~~~~~l~~~~gl~~~~~~~~l~~~l~~~-g~~~~~ig~~~~~~~~-~~~~~l~gpl~Dr~~~~~~Grrr----~ 82 (491)
T PRK11010 9 FQQPNSAILLILGFASGLPLALTSGTLQAWMTVE-NIDLKTIGFFSLVGQA-YVFKFLWSPLMDRYTPPFLGRRR----G 82 (491)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHH-HHHHHHHHHHHHcccccCCCCch----H
Confidence 3555666666656666666777777788887774 4554333332222222 25789999999999 7662 3
Q ss_pred HHHHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcch
Q 014628 276 LLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
.+..+.+............ ++.+...+..++.+++.+...++...+..|.+|+++|+++.++....... |.++++.
T Consensus 83 ~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~l-G~llg~~ 161 (491)
T PRK11010 83 WLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRL-AMLVSGG 161 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHH-HHHHHHH
Confidence 3444444444443333222 24445555566667777777777788999999999999999999655554 8888998
Q ss_pred hHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 353 LVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 353 ~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
+.+++.+...+|+..|++.+...++..
T Consensus 162 l~~~l~~~~~GWr~~f~i~a~l~ll~~ 188 (491)
T PRK11010 162 LALWLADRYLGWQGMYWLMAALLIPCI 188 (491)
T ss_pred HHHHHHhcccCHHHHHHHHHHHHHHHH
Confidence 888888843358888888776554443
No 214
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.95 E-value=6.3e-08 Score=78.74 Aligned_cols=288 Identities=12% Similarity=0.105 Sum_probs=151.2
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhh-hhccCCCCCchhHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPF-IDDNAPVPQKTAWL 82 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~-i~~~~~~~~r~~~~ 82 (421)
..+...+.|.++|+-|||+.-+.-++.+.++++ .-.+++|-.++++|++.|++.+..+....++ +.|..++ |+.-.
T Consensus 85 smLFGtivgSLaDkqGRKracvtycitYiLsCi-TKhSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHnek--r~Feq 161 (454)
T KOG4332|consen 85 SMLFGTIVGSLADKQGRKRACVTYCITYILSCI-TKHSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHNEK--RGFEQ 161 (454)
T ss_pred HHHHHHHHHHHHhhhccccceeeehHHHHHHHH-hhcCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhhhc--cCChH
Confidence 345667889999999999975555544444332 3457889999999999999999888877664 6776533 33211
Q ss_pred HH----HH----HHHHHHhhhHHHhHHhhhhcch--hHHHHHHHHHHHHHHHHHHHhcccccccccCCccccchhhhhhc
Q 014628 83 SM----FY----MCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASV 152 (421)
Q Consensus 83 ~~----~~----~~~~~G~~~g~~~~~~l~~~~~--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 152 (421)
-+ +. .+..+=.+++.+.+..+.+.++ --.+|-..+.+..+...+.+ ..+....+++.+.+..
T Consensus 162 qWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil---~~W~ENygdps~~kdl----- 233 (454)
T KOG4332|consen 162 QWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVIL---SSWSENYGDPSENKDL----- 233 (454)
T ss_pred hhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH---hhhhhccCChhhhHHH-----
Confidence 11 11 2223334445555555655443 33455444433222222221 2221121122221111
Q ss_pred ccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHHH-HHHHHHHHHHhhHHH
Q 014628 153 SEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY-NFVIGAYSYWGPKAG 231 (421)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 231 (421)
..+.....+.+..++++..+.....++ ...+.....|.|..-
T Consensus 234 -------------------------------------ltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLs 276 (454)
T KOG4332|consen 234 -------------------------------------LTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALS 276 (454)
T ss_pred -------------------------------------HHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCC
Confidence 111122344455666655544333333 233333344666533
Q ss_pred HHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-------hhhHHHHHHH
Q 014628 232 YNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-------SSLYGFLALF 304 (421)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 304 (421)
-+..+. +....+ +...+.+++|+-+..++..|-..+. ...+.+..++....+.+.... .++....+.+
T Consensus 277 pn~e~i-PhGfiF-atFMlASmLGSSla~Rl~s~s~~~v---e~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F 351 (454)
T KOG4332|consen 277 PNDEEI-PHGFIF-ATFMLASMLGSSLASRLLSRSSPKV---ESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGF 351 (454)
T ss_pred CCcccC-CchhHH-HHHHHHHHHhhHHHHHHHhcCCccc---chHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHH
Confidence 222211 222222 3344555666666555555433321 133444444333333332221 1334446677
Q ss_pred HHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHh
Q 014628 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
++.-.+.+..+|...-+-.+.+|.+.|++.+-+...-.+.
T Consensus 352 ~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 352 CLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 7788899999999999999999999998776665443343
No 215
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.93 E-value=4.7e-08 Score=90.38 Aligned_cols=123 Identities=16% Similarity=0.109 Sum_probs=85.0
Q ss_pred hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhh--------HHHHHHHHHHHHHHHhccCc
Q 014628 246 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL--------YGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~ 317 (421)
....++..++.++.|+++||+||| +.+..+.....+..+.....++. ..+++.-++.|++.+..++.
T Consensus 70 ~~~~~~~~ig~~~~G~l~Dr~Grr-----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~ 144 (432)
T PRK10406 70 AAGFLMRPIGGWLFGRIADKHGRK-----KSMLISVCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGT 144 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCcH-----HHHHHHHHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhh
Confidence 334456669999999999999999 77777777766666555443332 23455556777888888888
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh--------ccccchhhhHHHHHHH
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD--------HVNNWRKTTLALTSIF 375 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~--------~~g~~~~~~~~~~~~~ 375 (421)
...++.|..|+++|+.+.++.+..... |.++++.+...+.. .. +|+..|++.++..
T Consensus 145 ~~~~i~e~~p~~~rg~~~~~~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~~~-gWr~~F~i~~~~~ 208 (432)
T PRK10406 145 SATYMSEVAVEGRKGFYASFQYVTLIG-GQLLALLVVVVLQQTLEDAELREW-GWRIPFALGAVLA 208 (432)
T ss_pred HHHHHHHhCCCCcccHHHHHHHHHHHH-HHHHHHHHHHHHHHhCCHHHHhcc-chHHHHHHHHHHH
Confidence 899999999999999998887544443 65666544433321 22 4777777654443
No 216
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.93 E-value=3.3e-08 Score=90.60 Aligned_cols=142 Identities=13% Similarity=0.019 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhh----hccccchhhHHHHH-HHH
Q 014628 209 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSA-ATF 282 (421)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~-~~~ 282 (421)
.....+..++.+.....+++.|+++ .+.+.... ....+..+.+++..++.|+++|| +||| +..+. ...
T Consensus 9 ~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRR-----rp~il~g~~ 82 (477)
T TIGR01301 9 VASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRR-----RPFIAAGAA 82 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCCh-----HHHHHHHHH
Confidence 3444455566677777778887755 55665444 33466678889999999999995 8887 44433 344
Q ss_pred HHHHHHHHHHhhhhh-----------------HHHHHHHHHHHHHHHhccCchhhhhhcccCCchh--hHHHHHHHHHHH
Q 014628 283 LGAISCLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIH 343 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~ 343 (421)
.....+.++....+. +..++...+..+..+...++..+++.|..|+++| +.+.++.+...+
T Consensus 83 ~~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~ 162 (477)
T TIGR01301 83 LVAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMA 162 (477)
T ss_pred HHHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHH
Confidence 343443333332221 2233344455567777888899999999998754 578888866666
Q ss_pred hhcccCcchhHHHh
Q 014628 344 IFGDVPSSPLVGVL 357 (421)
Q Consensus 344 ~~g~~~~~~~~g~l 357 (421)
. |+++++.+.+..
T Consensus 163 l-G~ilg~~~g~~~ 175 (477)
T TIGR01301 163 I-GNVLGYAAGAYS 175 (477)
T ss_pred H-HHHHHHHHHHHH
Confidence 5 888888766654
No 217
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.91 E-value=5.7e-07 Score=85.96 Aligned_cols=125 Identities=18% Similarity=0.177 Sum_probs=101.6
Q ss_pred chhhHHHHhhhh-cCCchHHHHHHHHHHHHHhhhhhhhh--------HHHHHHHHHHhhhhhhhhccchhhhhhccCCCC
Q 014628 6 VASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFD--------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP 76 (421)
Q Consensus 6 i~~~~~g~l~Dr-~Grr~~~~~~~~~~~~~~~~~~~~~~--------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 76 (421)
+.++++|.++|+ +||++++.++.++..++.++.+++.. ....+++-.+..+|.|+.-|...+...|.++++
T Consensus 38 l~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~ 117 (654)
T TIGR00926 38 LTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEER 117 (654)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCcc
Confidence 467789999997 59999999999999999988776421 233566778888899999999999999999764
Q ss_pred C---chhHHHHHHHHHHHHhhhHHHhHHhhhhcc-------hhHHHHHHHHHHHHHHHHHHHhc
Q 014628 77 Q---KTAWLSMFYMCIPTGVALGYVYGGVVGSHL-------NWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 77 ~---r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~-------~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+ |-+.+.++..+.++|..+++.+..++.+.. +|...|.+.++..++..++....
T Consensus 118 ~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia~lvf~~g 181 (654)
T TIGR00926 118 QLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILALIVFMAG 181 (654)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 3 667899999999999999999998887443 69999999988877766655443
No 218
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=98.91 E-value=1.9e-08 Score=87.61 Aligned_cols=167 Identities=16% Similarity=0.157 Sum_probs=109.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 282 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 282 (421)
++++...+.........+...... ..+.+.++.++.+. .+.+++.+.+.+.++..|.+.||+|.| ++...+.+
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~-~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR-----~~~~~s~~ 87 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLG-VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGR-----KWTILSML 87 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCch-----HHHHHHHH
Confidence 444444443333333333333333 34447788887666 556888899999999999999999999 77777777
Q ss_pred HHHHHHHHHHhhhh---hHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 283 LGAISCLTAFCLSS---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 283 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+..+.++....... .+.++++-.+.| ..+..+......++..+|+|++|.++|++ ...|. |..+...+.+++..
T Consensus 88 l~~IP~~~~~~a~~~~~~~~ll~~gll~G-~~GasFav~m~~~s~~fP~~~qG~AlGI~-g~GN~-G~av~q~~~P~v~~ 164 (417)
T COG2223 88 LLLIPCLGLAFAVTYPSTWQLLVIGLLLG-LAGASFAVGMPNASFFFPKEKQGLALGIA-GAGNL-GVAVAQLVAPLVAV 164 (417)
T ss_pred HHHHHHHHHHHHccCCchHHHHHHHHHHh-cccceehcccccccccCChhhhhHHHHHh-ccccc-cHHHHHHHHHHHHH
Confidence 76666655544432 224443333333 33455666777889999999999999999 46665 88888888888888
Q ss_pred cccc--chhhhHHHHHHHHHHH
Q 014628 360 HVNN--WRKTTLALTSIFFLAA 379 (421)
Q Consensus 360 ~~g~--~~~~~~~~~~~~~~~~ 379 (421)
..|. ++....+.....++..
T Consensus 165 ~~g~~~w~~~~~i~~~~l~v~~ 186 (417)
T COG2223 165 AFGFLAWRNVAGIYVVALAIAA 186 (417)
T ss_pred HHhhHHHHHHHHHHHHHHHHHH
Confidence 7662 5555555544444433
No 219
>PRK15075 citrate-proton symporter; Provisional
Probab=98.91 E-value=4.8e-08 Score=90.38 Aligned_cols=159 Identities=13% Similarity=0.090 Sum_probs=100.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-h-HHHhh-----hhHHHHHHhhhhhHHHhhhccccchhhHHH
Q 014628 205 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-M-MFGGV-----TIVCGIVGTISGGFILDQMGATISNAFKLL 277 (421)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~-----~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 277 (421)
......+..++...-...+....|...++ ++.++.+ . ...+. ..+...++.++.|++.||+||| +.+
T Consensus 16 ~~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr-----~~l 89 (434)
T PRK15075 16 AILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRR-----KGL 89 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchH-----HHH
Confidence 34445555666666677777778876665 4544322 1 21111 1222246788999999999999 777
Q ss_pred HHHHHHHHHHHHHHHhhhhhHH--------HHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccC
Q 014628 278 SAATFLGAISCLTAFCLSSLYG--------FLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 349 (421)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 349 (421)
..+..+..+...+....++... +++.-++.+++.+...+....++.|.+|+++|++++++.+...+. |..+
T Consensus 90 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~-g~~~ 168 (434)
T PRK15075 90 IVTLSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQV-AVVF 168 (434)
T ss_pred HHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHH-HHHH
Confidence 7776666666655555554332 344445566666666666778899999999999999998655554 6666
Q ss_pred cchhHHHhh--------hccccchhhhHHH
Q 014628 350 SSPLVGVLQ--------DHVNNWRKTTLAL 371 (421)
Q Consensus 350 ~~~~~g~l~--------~~~g~~~~~~~~~ 371 (421)
++.+.+.+. +..| |+..|++.
T Consensus 169 g~~~g~~l~~~~~~~~~~~~g-Wr~~f~~~ 197 (434)
T PRK15075 169 AALLGYLLNQWLSPAQMAEWG-WRIPFLIG 197 (434)
T ss_pred HHHHHHHHHHhCCHHHHhccc-hHHHHHHH
Confidence 665555542 3333 76677653
No 220
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=98.89 E-value=1.3e-08 Score=92.83 Aligned_cols=122 Identities=10% Similarity=-0.035 Sum_probs=93.7
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh------hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCC-C
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV-P 76 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~ 76 (421)
..++.++.|++.||+|+|+.+..+..+.++..+.... .++...+.....+.+++.+...+...+.+.+..++ +
T Consensus 257 ~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (390)
T TIGR02718 257 VLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGD 336 (390)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 3456788999999999999988877665333332221 22334445556666777777777788887777776 7
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHH
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 125 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~ 125 (421)
++++.++..+...++|..+||.++|.+.+..||+..|++.+++.++..+
T Consensus 337 ~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~ 385 (390)
T TIGR02718 337 QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAIL 385 (390)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999999999999988876655443
No 221
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.88 E-value=5.6e-09 Score=88.78 Aligned_cols=124 Identities=6% Similarity=-0.012 Sum_probs=96.6
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHH
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
-|.++.+++.||+|||+++..+.+++++..++...+.+-....+.-+..-+..++.+.+.+.|..|.+|.+-|+...|.-
T Consensus 396 PGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtc 475 (528)
T KOG0253|consen 396 PGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTC 475 (528)
T ss_pred CchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhh
Confidence 47789999999999999999999999999998887765444444444444445566778899999999999999999999
Q ss_pred HHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 86 YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 86 ~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+...-+|.++.|.++ +....+-..+..+.+...++.+++..++.
T Consensus 476 SsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 476 SSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeee
Confidence 999999999999998 33222344556666666666666666653
No 222
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.86 E-value=1.6e-08 Score=97.08 Aligned_cols=126 Identities=8% Similarity=-0.056 Sum_probs=91.2
Q ss_pred HHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh-------------
Q 014628 230 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 295 (421)
Q Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 295 (421)
-+++.++.+..+. .+.+...++..++.++.+++.||.+|+ +++..+.++.+++.++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 4456677775554 445677888999999999999999998 666555555555544443321
Q ss_pred --------------------------------------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHH
Q 014628 296 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 337 (421)
Q Consensus 296 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 337 (421)
....+++.-++.|++.+..++....++.|.+|+++|+...++
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 122344566677777777778888999999999999999999
Q ss_pred HHHHHHhhcccCcchhHHHhhhcc
Q 014628 338 STVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 338 ~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+..... |..+|+.+.+++.+..
T Consensus 213 ~~~~~~i-G~~lG~llgg~l~~~~ 235 (633)
T TIGR00805 213 LESIAVF-GPAFGYLLGSFCLQIY 235 (633)
T ss_pred HHHHHHh-hhHHHHHHHHHHHhcc
Confidence 9655444 9899998888887643
No 223
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=98.84 E-value=2.3e-08 Score=88.76 Aligned_cols=128 Identities=11% Similarity=0.153 Sum_probs=112.5
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHH
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMF 85 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~ 85 (421)
+.-.+..++.+|+|.|+.++++.++.++=.+++++++|.+.+.+.+.+.|+-.+........|+.+.+|+|-.++...+.
T Consensus 274 ~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~ 353 (412)
T PF01306_consen 274 LMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVG 353 (412)
T ss_dssp HHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHH
T ss_pred HHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHH
Confidence 44567889999999999999999999999999999999999999999999999999999999999999998877888774
Q ss_pred -HHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 014628 86 -YMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 86 -~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
+.+..+|..+.+.++|.+.|+.|.+..|++.+.+.++..++..+.+++
T Consensus 354 ~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 354 FQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 788999999999999999999999999999999988888888887754
No 224
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.83 E-value=7.3e-08 Score=86.79 Aligned_cols=148 Identities=14% Similarity=-0.007 Sum_probs=93.5
Q ss_pred HHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhh-----ccccchhhHHHHHHHHHHHHHHHHHHhh---
Q 014628 223 YSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQM-----GATISNAFKLLSAATFLGAISCLTAFCL--- 294 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 294 (421)
...-.|.+.++ .+.+..+..+.....+...+ .++.|+++||+ |||+ .++..+.+..........+.
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~-~~~~g~~~Dr~~~~~~Grr~----~~l~~~~~~~~~~~~~l~~~~~~ 80 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLVGLPYSL-KFLWSPLVDTVYLPFFGRRR----SWLVLTQVLLLSLLLILSFLVPS 80 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHHHHHHHH-HHHHHHHHhcccCCCCCccH----HHHHHHHHHHHHHHHHHHcCCcc
Confidence 34456667665 46665555433322333333 88999999998 5551 33444444444443333333
Q ss_pred hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc-------chhh
Q 014628 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-------WRKT 367 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-------~~~~ 367 (421)
.+.+.......+.+.+.....++..+++.|.+|+++|+.+.++....... |.++++.+.+.+.+..+. |+..
T Consensus 81 ~~l~~l~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~-G~~~~~~l~~~l~~~~g~~~~~~~~wr~~ 159 (356)
T TIGR00901 81 TDLPLLAGLAFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRA-GMLLSGSLALVLASPEFANTGLITLWGYI 159 (356)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHH-HHHHHHHHHHHHhhhcccccccccccHHH
Confidence 23333444444555666666677788899999999999999999655555 989999898888877653 7777
Q ss_pred hHHHHHHHHH
Q 014628 368 TLALTSIFFL 377 (421)
Q Consensus 368 ~~~~~~~~~~ 377 (421)
|++.++..++
T Consensus 160 f~i~ai~~l~ 169 (356)
T TIGR00901 160 FFWTALLILP 169 (356)
T ss_pred HHHHHHHHHH
Confidence 7766655444
No 225
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=98.82 E-value=1.1e-07 Score=85.51 Aligned_cols=141 Identities=12% Similarity=0.104 Sum_probs=96.3
Q ss_pred HHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHH
Q 014628 224 SYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLA 302 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (421)
...+|.+.+ .++.+.... ...+...++..++.+..|++.||+++| +.+..+.+......... ..++.+.+++
T Consensus 20 ~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 92 (355)
T TIGR00896 20 GPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEE-----RSVAAGLLLIAAGILIR-SAPGTALLFA 92 (355)
T ss_pred cccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCch-----HHHHHHHHHHHHHHHHH-HhccHHHHHH
Confidence 345565554 467775554 445778889999999999999999998 66665555444444433 3455555555
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc-chhhhHHHHH
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTS 373 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~ 373 (421)
..++.+++.+...+.......+.. +++|+++.++.+..... |..+++.+.+.+.+..+. |+..+...+.
T Consensus 93 ~~~~~g~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-g~~i~~~~~~~l~~~~~~~w~~~f~~~~~ 162 (355)
T TIGR00896 93 GTALIGVGIAIINVLLPSLIKRDF-PQRVGLMTGLYSMALMG-GAALAAAATVPLAQHSGGHWQQALAWWAL 162 (355)
T ss_pred HHHHHHHHHHHHhccchHHHHHhC-cchhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Confidence 666667776666666666666666 46899999999766555 888888888888776543 6666555444
No 226
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.79 E-value=4.6e-08 Score=87.28 Aligned_cols=177 Identities=12% Similarity=0.050 Sum_probs=129.2
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC----Cccchh-HHHhhhhHHHHHHhhhhhHHHhhh-ccccchhhHH
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKL 276 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~ 276 (421)
.|.++.+...-+.--+.+|++-..+..|+....+ .++.++ .+...+....-+..+++||++||+ |+| +.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~t 94 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RT 94 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HH
Confidence 3455566666677788899998888888887777 665443 333333333345678899999996 777 77
Q ss_pred HHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCc--hhhHHHHHHHHHHHhhcccCcch
Q 014628 277 LSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSP 352 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~ 352 (421)
+..+.++..++.+.+.... ....+.+.+.+...+.+..=+....++.+.+|++ +|-.+.++..+..+. |+.++|.
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl~~p~ 173 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSLIAPI 173 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHHHHHH
Confidence 7777777777666666553 4555666666677888888888888999999884 577777887777777 9999999
Q ss_pred hHHHhhhccccchhhhHHHHHHHHHHHHHHHHhh
Q 014628 353 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 386 (421)
Q Consensus 353 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 386 (421)
+.+++.+..| |...|...++-...+.+.+...+
T Consensus 174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999977 77888887777777766665443
No 227
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=98.79 E-value=2.3e-07 Score=81.60 Aligned_cols=99 Identities=19% Similarity=0.211 Sum_probs=74.5
Q ss_pred cchhhHHHHhhhh----cCCchHH-HHHHHHHHHHHhhhhhhhhHH-----------------HHHHHHHHhhhhhhhhc
Q 014628 5 LVASPIFASLAKS----HNPFRLI-GVGLSVWTFATAGCGSSFDFW-----------------SIAICRMLVGVGEASFI 62 (421)
Q Consensus 5 ~i~~~~~g~l~Dr----~Grr~~~-~~~~~~~~~~~~~~~~~~~~~-----------------~l~~~r~l~G~~~~~~~ 62 (421)
.+.+|+.|..+|| |||||.+ ..+.+..+++.++..++.++. .+++.--+.-++.-...
T Consensus 81 ~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~q 160 (498)
T KOG0637|consen 81 LLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQ 160 (498)
T ss_pred ceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhh
Confidence 4678899999996 7888865 455666677777777776543 23333344444556777
Q ss_pred cchhhhhhccCCCCCchh-HHHHHHHHHHHHhhhHHHhHHhh
Q 014628 63 SLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 63 ~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
..+-+++.|...++++.+ +++++.....+|..+|..+++++
T Consensus 161 gp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~ 202 (498)
T KOG0637|consen 161 GPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYL 202 (498)
T ss_pred hhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeeccccc
Confidence 889999999988776666 99999999999999999998754
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.77 E-value=2.6e-08 Score=89.04 Aligned_cols=130 Identities=17% Similarity=0.142 Sum_probs=117.4
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.|-++.-++.+++..|+|+-+++.+++.+..+=.+..+..+|.|..+...+++|+..+..+.+..+|+++..||+-|..+
T Consensus 417 ~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~ 496 (618)
T KOG3762|consen 417 AGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATA 496 (618)
T ss_pred cchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHH
Confidence 34566778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHH-HHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 82 LSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 82 ~~~~~-~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
.++.+ ...++|--+|.++||.+.+.++-|..|.+.++.+++..++...+-
T Consensus 497 Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 497 QGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99885 456889999999999999999999999999988877766655543
No 229
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=98.73 E-value=4.5e-08 Score=85.38 Aligned_cols=116 Identities=13% Similarity=0.097 Sum_probs=103.8
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
.++|++++|++.||+|.|+++..+++++.+.++..-+...-..+.++-.+.|...|+.+..+.++..+.+|+++-++.+|
T Consensus 301 A~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFg 380 (438)
T COG2270 301 AALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFG 380 (438)
T ss_pred HHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceee
Confidence 46789999999999999999999999999999998888888888889999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcch-hHHHHHHHHHH
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAIL 119 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~-wr~~f~~~~~~ 119 (421)
+++...-.+..+||.+.+.+.+..| -|..+....++
T Consensus 381 lyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vl 417 (438)
T COG2270 381 LYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVL 417 (438)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHH
Confidence 9999999999999999999887543 56666555444
No 230
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=98.71 E-value=1.4e-07 Score=85.20 Aligned_cols=127 Identities=17% Similarity=0.158 Sum_probs=102.8
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh-hhHHHHHH----HHHHhhhhhhhhccchhhhhhccCCCCCchh
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAI----CRMLVGVGEASFISLAAPFIDDNAPVPQKTA 80 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~-~~~~~l~~----~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~ 80 (421)
..-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+ ...++|+..+..+.++..++.+..|++.|++
T Consensus 258 ~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at 337 (400)
T PF03825_consen 258 PFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRAT 337 (400)
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHH
Confidence 344578999999999999999999999988888877 55444333 3567999999999999999999999999999
Q ss_pred HHHHHHH-HHHHHhhhHHHhHHhhhhcch------hHHHHHHHHHHHHHHHHHHHhccc
Q 014628 81 WLSMFYM-CIPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVLAFVIKP 132 (421)
Q Consensus 81 ~~~~~~~-~~~~G~~~g~~~~~~l~~~~~------wr~~f~~~~~~~~~~~~~~~~~~p 132 (421)
+.++++. ..++|..+|..++|++.+++| |...+.+.+++.++..++.+++.+
T Consensus 338 ~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 338 AQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999876 468999999999999998765 555667777666666666555543
No 231
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.71 E-value=9e-08 Score=84.38 Aligned_cols=120 Identities=21% Similarity=0.338 Sum_probs=99.0
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhh--HHHHHHHHHHhhhhhhhhccchhhhhhccCCC-CCch
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVGVGEASFISLAAPFIDDNAPV-PQKT 79 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~ 79 (421)
+..+++++.|.++||+|||+.+..+.....++.+++++..+ .+.+++.|+++|++.+...+...+++.|++|+ ++|+
T Consensus 51 ~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (338)
T COG0477 51 GYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASALLSEWFPEATERG 130 (338)
T ss_pred HHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHH
Confidence 34566689999999999999888888776666677777766 89999999999999999999999999999998 6799
Q ss_pred hHHHHHHH-HHHHHhhhHHHhHHhhhhc--chhHHHHHHHHHHHHH
Q 014628 80 AWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLP 122 (421)
Q Consensus 80 ~~~~~~~~-~~~~G~~~g~~~~~~l~~~--~~wr~~f~~~~~~~~~ 122 (421)
...+.... ...+|..+++.+++.+... .+||+.|.........
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (338)
T COG0477 131 LAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLL 176 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 99999888 5888999999887776654 5799977776655433
No 232
>PRK09848 glucuronide transporter; Provisional
Probab=98.67 E-value=8.8e-08 Score=89.05 Aligned_cols=107 Identities=10% Similarity=0.064 Sum_probs=89.5
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh--hHHHHHHHHHHhhhhhhhhccchhhhhhccCCCC----
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---- 76 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---- 76 (421)
+..++.++++++.||+|+|+++.++.++..++.++..+.+ +++.+++..++.|+|.+...+...++.+|..|.+
T Consensus 276 ~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~ 355 (448)
T PRK09848 276 GTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLT 355 (448)
T ss_pred HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhh
Confidence 3456788999999999999999999998888877776654 5677777888999999999999999999888754
Q ss_pred ---CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchh
Q 014628 77 ---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 77 ---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 109 (421)
++|..++.++....+|..+|+.+.+.+.+..|+
T Consensus 356 g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 356 GVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred CccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 358999999999999999999999887654443
No 233
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.67 E-value=4.3e-07 Score=82.52 Aligned_cols=130 Identities=12% Similarity=-0.037 Sum_probs=102.2
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhh---hHH------HHHHHHHHhhhhhh-hhccchhhhhhccCC
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAICRMLVGVGEA-SFISLAAPFIDDNAP 74 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~---~~~------~l~~~r~l~G~~~~-~~~~~~~~~i~~~~~ 74 (421)
.+..+++..+.||+|||+.++.+..+..+..+++.... +.. ..+++.++..++.+ +..|...-+.+|.+|
T Consensus 319 ~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~ 398 (485)
T KOG0569|consen 319 LLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFP 398 (485)
T ss_pred HHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCC
Confidence 46778899999999999999999999988888776542 111 12334444443333 246778889999999
Q ss_pred CCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 014628 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
++.|..++++.....-+...+-......+.+..|- +.|++..+++....+..++.+||++
T Consensus 399 ~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lPETk 458 (485)
T KOG0569|consen 399 QSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLPETK 458 (485)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCcccC
Confidence 99999999999999998888877777777777665 7888899999999999999999964
No 234
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.65 E-value=2.9e-07 Score=84.43 Aligned_cols=136 Identities=19% Similarity=0.298 Sum_probs=109.9
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHHHhccCchhh
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNY 320 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (421)
.+.+....+.+++.+.++++.||+|.| +++..+.++..+..++..... +.+.+++.=++.|++.+..++....
T Consensus 77 ~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~~pa~~~ 151 (466)
T KOG2532|consen 77 LIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVLFPAIGS 151 (466)
T ss_pred HHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHHHhhhhc
Confidence 445667889999999999999999999 788777777777766655443 3345567777888899999999999
Q ss_pred hhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHH
Q 014628 321 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 384 (421)
Q Consensus 321 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 384 (421)
+..+-.|+++|++..++.....+. |.+++-++.|++.+...+|+..|++.+.+.++..++++.
T Consensus 152 i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~ 214 (466)
T KOG2532|consen 152 ILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFL 214 (466)
T ss_pred eeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999655555 888888899999998445989999988887666665553
No 235
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.64 E-value=2.2e-06 Score=74.57 Aligned_cols=128 Identities=11% Similarity=0.045 Sum_probs=101.6
Q ss_pred hhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH---hhhhhHHHHH
Q 014628 227 GPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLSSLYGFLA 302 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 302 (421)
+-..+++.++.+..+. .+......+..+.++..+++.+|++.| +-++.+..+.++.+.+.. ...+...++.
T Consensus 35 Lip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~ 109 (422)
T COG0738 35 LIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGFFLV 109 (422)
T ss_pred hHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHHHHH
Confidence 3345677888887665 444667788899999999999999999 778888888777777665 3345666777
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
..++.+.+.+......+.++...-+++..+.-+.+...+... |++++|.+.+.+..+
T Consensus 110 ~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lils 166 (422)
T COG0738 110 ALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLILS 166 (422)
T ss_pred HHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHHh
Confidence 778888888888888999999998888888888888655555 999999999998873
No 236
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.63 E-value=1.3e-07 Score=89.80 Aligned_cols=129 Identities=14% Similarity=0.118 Sum_probs=108.7
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhh
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
...++..++..+|.++.|.++||+||| +.+..+.++..++.+...+.++.+.+++.=++.|++.+........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 344777889999999999999999999 888888888888888888899999999999999999999999999999
Q ss_pred hcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHH
Q 014628 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 381 (421)
.|.+++++|+.+..+ ...... ++..++...+++.. +|+..+++.........+.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~ 250 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLL 250 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 566666 55667878888877 4777777766665554444
No 237
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=98.62 E-value=2.2e-07 Score=81.44 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=91.5
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.++.+|.+..+++.||+|+||++.++..+..++.++....++...+ ..-++.|++.+..+|...+...+..|++ .+++
T Consensus 189 ~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~-~~~a 266 (310)
T TIGR01272 189 GGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTIFSLALNALGRH-TSQG 266 (310)
T ss_pred HHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHHHHHHHhhhhhh-hhhh
Confidence 3567899999999999999999988888888877666655544333 3556889999999999999998888764 5566
Q ss_pred HHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHH
Q 014628 82 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 118 (421)
Q Consensus 82 ~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~ 118 (421)
.++. ....+|..++|.+.|.+.|..|.+..|++..+
T Consensus 267 sai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 267 SGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 6765 56678999999999999998899998885543
No 238
>PRK09669 putative symporter YagG; Provisional
Probab=98.61 E-value=1.2e-06 Score=81.50 Aligned_cols=149 Identities=17% Similarity=0.033 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
.+..+..+.....+..|++.|+.+..+.++..... ..+.-+...+..++.|+++||.+.|..++++.+..+....++..
T Consensus 15 g~g~~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~ 94 (444)
T PRK09669 15 GLGDTACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVC 94 (444)
T ss_pred cchhhhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHH
Confidence 33344445556667788999999999999765533 35566788899999999999966554444466655544444444
Q ss_pred HHHHhhhh------hHHHHHHHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 289 LTAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 289 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+....++ .....+...+...+......+..++..+..++ ++|.+..+........ |..+++.+...+..
T Consensus 95 ~l~f~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~-G~~i~~~~~~pl~~ 171 (444)
T PRK09669 95 LLTFYTPDFGATGKIIYACVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFI-GGLIVSVIALPLVD 171 (444)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 33333321 22333334445555656666777777776644 7888887777444444 66666554444443
No 239
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.61 E-value=5e-06 Score=69.16 Aligned_cols=127 Identities=10% Similarity=0.066 Sum_probs=93.2
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh-------hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCC
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPV 75 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 75 (421)
|..+ +++.|.+.|++|++.++.+|.+...+|..+...+ .++|.+.+..++.|.+.+....++.....+.+|.
T Consensus 49 G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~ 127 (250)
T PF06813_consen 49 GSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR 127 (250)
T ss_pred Hhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc
Confidence 4444 4788999999999999999999999988876543 4678888888999988887777777777788985
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~ 131 (421)
+||++.++.-...+++..+-..+...+.+...-+..+++...+.++..+..++..
T Consensus 128 -~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l~~~~~vr 182 (250)
T PF06813_consen 128 -SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCLVAMFFVR 182 (250)
T ss_pred -ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHhhhee
Confidence 6999999999999998877666665555443334444444334444444444443
No 240
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.60 E-value=7.8e-05 Score=68.69 Aligned_cols=229 Identities=13% Similarity=0.126 Sum_probs=130.5
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh---------h----------------------hHHHHHHHHHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------F----------------------DFWSIAICRML 53 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~---------~----------------------~~~~l~~~r~l 53 (421)
.+...+..+++|+++|.+++-+....+.....+.++. + +.|.+.+.-+.
T Consensus 73 ~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~~i~~~~~Wt~slfYv~ 152 (491)
T PF03219_consen 73 ILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKGFIAMFRNWTFSLFYVM 152 (491)
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHHHHHHHHHHHHHHHHHH
Confidence 3456778999999999999887777776666665542 0 11222222222
Q ss_pred hhhhhhhhcc-chhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh---------cchhHHHHHHHHHHHHHH
Q 014628 54 VGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------HLNWRYAFWGEAILMLPF 123 (421)
Q Consensus 54 ~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~---------~~~wr~~f~~~~~~~~~~ 123 (421)
.-+-.....+ .-..+.+|.++.+|-.|..+++..+.++|.++++.+...+.+ ...|...+.......++.
T Consensus 153 aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~v~~~ 232 (491)
T PF03219_consen 153 AELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVDAWELSLNSLMGIVLIL 232 (491)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccHhHHHHHHHHHHHHH
Confidence 2222233333 356788999999999999999999999999999988888776 224654332222111111
Q ss_pred HHHH---HhcccccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHh
Q 014628 124 AVLA---FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 200 (421)
Q Consensus 124 ~~~~---~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (421)
.++. .....+.... +++..+.. ..++++ +......++++.+
T Consensus 233 g~~i~~~~~~~~~~vl~--~~~~~~~~---------------------------~~~kk~-------k~k~s~~es~k~l 276 (491)
T PF03219_consen 233 GIVIILLYRYMNKNVLT--DPRFYPSA---------------------------KKKKKK-------KPKMSLKESFKLL 276 (491)
T ss_pred HHHHHHHHHHHHHHccC--ccccchhh---------------------------hccccc-------CCCccHHHHHHHH
Confidence 1111 1111111000 00000000 000000 1112334678889
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchh----HHHhhhhHHHHHHhhhhhHHHhhhccc
Q 014628 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM----MFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
+++|.+..+.+...+++...+.+..-.....++.+..+..-. .+....++..++..++++.+.+|+|-+
T Consensus 277 ~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~ 349 (491)
T PF03219_consen 277 LKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWR 349 (491)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 999999988888877777776666555555555554332111 222344455555567778888888876
No 241
>PRK11462 putative transporter; Provisional
Probab=98.59 E-value=2.7e-06 Score=79.17 Aligned_cols=152 Identities=13% Similarity=0.035 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
.+.-+..+........|+..|+.+..+.++..... ..+.-+...+.-++.|+++||...|..+++..+..+....++.+
T Consensus 15 g~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~ 94 (460)
T PRK11462 15 GMGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVC 94 (460)
T ss_pred ccchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHH
Confidence 34444555666777788999999999998655533 34555777888999999999876655555566666655555554
Q ss_pred HHHHhhhh------hHHHHHHHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 289 LTAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 289 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
.+++..+. .....+..++...+......+..++..+..++ ++|++.++........ |..+++.+...+.+..
T Consensus 95 ~llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~i-G~~~~~~~~~plv~~~ 173 (460)
T PRK11462 95 VLAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATA-GGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHh
Confidence 44443321 22334444556677777778888888888775 7999999988544444 7666666654444443
Q ss_pred c
Q 014628 362 N 362 (421)
Q Consensus 362 g 362 (421)
|
T Consensus 174 g 174 (460)
T PRK11462 174 G 174 (460)
T ss_pred C
Confidence 3
No 242
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.57 E-value=6.2e-07 Score=82.53 Aligned_cols=135 Identities=20% Similarity=0.172 Sum_probs=107.1
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhh
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 322 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (421)
...++..++.+++.+.++.+.||++-. +.+..+.+.-.....+....++.+.+++.-++.|++.+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 344778899999999999999999955 666666666555555555578889999999999999999999999999
Q ss_pred hcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh-----ccccchhhhHHHHHHHHHHHHHHH
Q 014628 323 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..-+.+++|+.-+|+.+...+. |+++|+.+...+.. ...+|++.|++-+++.+...++.+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999999999999999766555 88888877766532 123588899988877766665544
No 243
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.57 E-value=2.1e-06 Score=80.35 Aligned_cols=147 Identities=8% Similarity=-0.001 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
.+..+..+.....+..|++.|+.+..+.++.... +..+.-+...+..++.|+++||...|..++++.+..+....++.+
T Consensus 12 g~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~ 91 (473)
T PRK10429 12 GFGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVL 91 (473)
T ss_pred ccchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHH
Confidence 3444555666777788899999999898865553 335566778889999999999653322222255555555555554
Q ss_pred HHHHhhhh------hHHHHHHHHHHHHHHHhccCchhhhhhcccC-CchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 289 LTAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 289 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+++..++ .....+..++...+......+..++..+..+ +++|.+..+......+. |+.+.+.+...+
T Consensus 92 ~llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~i-g~~~~~~~~~~~ 166 (473)
T PRK10429 92 FLLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASL-AGFVTAGFTLPF 166 (473)
T ss_pred HHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 44433221 1223334445566677777788888888774 58999988885444444 544444443333
No 244
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.52 E-value=2e-06 Score=79.98 Aligned_cols=149 Identities=17% Similarity=0.165 Sum_probs=107.8
Q ss_pred HhhHHHHHhhCCccc-hhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 014628 226 WGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 304 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (421)
+.+.+.+ .++.+.. .....++......+..++.+.+.||+|.| ...+.+.++...++++..+..+.+.+++..
T Consensus 68 ~~~~~~~-~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R-----~v~i~G~~v~~~g~~lssF~~~i~~l~lt~ 141 (509)
T KOG2504|consen 68 LFEELMD-YFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCR-----TVMIAGGLVAALGLLLSSFATSLWQLYLTF 141 (509)
T ss_pred hHHHHHH-HhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCch-----HHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 3344433 3444433 34555677777788889999999999999 888888888888888888888876655544
Q ss_pred -HHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 305 -TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 305 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
++.|++.+..+.+...++. .+.+++|+.++|+.....+. |.++-|.+.-.+.+..| |+..++..+.+.+-......
T Consensus 142 gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~-G~~~~~~l~~~l~~~~G-~r~~~l~~~~~~l~~~~~~~ 218 (509)
T KOG2504|consen 142 GVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGV-GTVVFPPLLKYLLSKYG-WRGALLIFGGISLNVLVAGA 218 (509)
T ss_pred HHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCc-ceeeHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHH
Confidence 4566777777777776666 45688999999999544444 87888888888888877 77777777776654444444
No 245
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.49 E-value=6.2e-07 Score=83.43 Aligned_cols=106 Identities=11% Similarity=0.020 Sum_probs=91.1
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhh----------hhhHHHHHHHHHHhhhhhhhhccchhhhhhcc
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
+.+++....+++.+|++.|+++.++.++.+++.+.... .++.+.++..-++.+++.+........++.+.
T Consensus 300 ~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~ 379 (468)
T TIGR00788 300 GSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARL 379 (468)
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHh
Confidence 45678888999999999999999999999988866431 13444556678899999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcch
Q 014628 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 108 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~ 108 (421)
.|+++++...++.+...++|..+++.+++.+.++.|
T Consensus 380 ~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 380 CPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred CCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999999999987666
No 246
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.49 E-value=1e-06 Score=81.38 Aligned_cols=144 Identities=16% Similarity=0.114 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhCCccchhHH-HhhhhHHHHHHhhhhhHHHh----hhccccchhhHHHHHHHHHHHHHH
Q 014628 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILD----QMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
+...........+++.|+.+..+.++..... ..+.-+...+..++.|.++| |+|||+ +.+..+.....+.+
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrr----p~~l~g~i~~~~~~ 86 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRR----PWILIGAILLALSF 86 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccc----eEeehhhHHHHHHH
Confidence 4445555666678888899998888654433 34555777888889999999 555553 55555555555555
Q ss_pred HHHHhh-h-------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 289 LTAFCL-S-------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 289 ~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.++... + ......+..++...+......+..++..+..++ ++|.+..+..+..... |..+...+.+.+.+
T Consensus 87 ~llf~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~-g~~l~~~~~~~l~~ 165 (428)
T PF13347_consen 87 FLLFSPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMI-GSLLASFLAPILVS 165 (428)
T ss_pred HHhhccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHH-HHHHHHHHhhhhhh
Confidence 544433 2 112234455556777778888888889998875 6899999988544444 66555556666665
Q ss_pred ccc
Q 014628 360 HVN 362 (421)
Q Consensus 360 ~~g 362 (421)
..+
T Consensus 166 ~~g 168 (428)
T PF13347_consen 166 WFG 168 (428)
T ss_pred hhc
Confidence 554
No 247
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.49 E-value=3.1e-06 Score=76.50 Aligned_cols=109 Identities=19% Similarity=0.196 Sum_probs=89.4
Q ss_pred hHHHHHHHHHHHHHhhhhhhh---h------HHHHHHHHHHhhhhhhhhccchhhhhhccCCCC---CchhHHHHHHHHH
Q 014628 22 RLIGVGLSVWTFATAGCGSSF---D------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 89 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~---~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 89 (421)
|+++++.++..+|.++..++. + .+.++++-.+.++|.|+.-|...++.+|.++++ +|.+.+.+++.+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 577888888888888854442 2 357888999999999999999999999999876 3677889999999
Q ss_pred HHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Q 014628 90 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 90 ~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
++|..+++.+.+++.+++||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999988776665554443
No 248
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.47 E-value=8e-06 Score=73.78 Aligned_cols=154 Identities=18% Similarity=0.049 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHH-hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHH
Q 014628 208 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 286 (421)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
.....-+..+..+.....|+..|+.+..|.++...... .+.=+...+.-++.|.++||..+|..+.|+.++.+.+..++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 33445566667777888899999999999997555333 44447778889999999999887776666777777666666
Q ss_pred HHHHHHhhh------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 287 SCLTAFCLS------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 287 ~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+.+.+..+ ......+...+.+.+......|..++..+..++ ++|.+..+.-..+... |..+...+.+.+.+
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~-g~~l~~~~~~plv~ 174 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASL-GGLLVAVLFPPLVK 174 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 555555444 233445566667788888888888888887665 7899999988544444 76666666666666
Q ss_pred ccc
Q 014628 360 HVN 362 (421)
Q Consensus 360 ~~g 362 (421)
..+
T Consensus 175 ~~g 177 (467)
T COG2211 175 LFG 177 (467)
T ss_pred HhC
Confidence 554
No 249
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.46 E-value=3.8e-05 Score=66.26 Aligned_cols=304 Identities=10% Similarity=-0.035 Sum_probs=154.5
Q ss_pred hHHHHhhh-----hcCCchH-HHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHhhhhhhhhccchhhhhhc
Q 014628 9 PIFASLAK-----SHNPFRL-IGVGLSVWTFATAGCGS-----------SFDFWSIAICRMLVGVGEASFISLAAPFIDD 71 (421)
Q Consensus 9 ~~~g~l~D-----r~Grr~~-~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 71 (421)
++|.++.| |+||||. ++-+..+.+......+. .++...+...-++.-+..+.-..+.-.+.-.
T Consensus 81 llWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALt 160 (510)
T KOG3574|consen 81 LLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALT 160 (510)
T ss_pred HHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 57889999 9999986 33333333332222221 2333334334455555566556666666667
Q ss_pred cCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh-------cchhH---------HHHHHHHHHHHHHHHHHHhcccccc
Q 014628 72 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWR---------YAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 72 ~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-------~~~wr---------~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
+..+++.|.+......+.+.|..++..+.-.+.+ ..+|. .-.+..+.+.++...+..+...|.
T Consensus 161 mLs~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~- 239 (510)
T KOG3574|consen 161 MLSRENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN- 239 (510)
T ss_pred hcCHhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC-
Confidence 7778888888887777777777776654333322 01121 112223333333333333332110
Q ss_pred cccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHhhcchhHHHHHHHHHH
Q 014628 136 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 215 (421)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (421)
+++. . ++.. ...++..+-++++++-|....+......
T Consensus 240 -----~~~~--~--~e~~----------------------------------~~i~~~yk~l~~vLklk~v~~la~i~lt 276 (510)
T KOG3574|consen 240 -----DESV--D--EELE----------------------------------LGIHESYKLLRDVLKLKSVRWLAGILLT 276 (510)
T ss_pred -----chhh--h--hhhh----------------------------------cCHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 1110 0 0000 1112223456667777777777776667
Q ss_pred HHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhcc--ccchh-hHHHHHHHHHHHHHHHHHH
Q 014628 216 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGA--TISNA-FKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~ 292 (421)
.-.++.+.....+.-+.|+ |.+....... .+..++..+..++...|+.. |+... .+.+..=.........+..
T Consensus 277 ~K~gf~a~da~t~LkLle~-Gv~ke~Lal~---~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~ 352 (510)
T KOG3574|consen 277 GKLGFQAADALTSLKLLEH-GVPKEELALI---AVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVW 352 (510)
T ss_pred HHHHhhhhhhccchHHHHc-CCChhHheee---eeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHh
Confidence 7777777777667666664 4443332221 13333334444444444322 11110 0001111111111112222
Q ss_pred hhhh------------hHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 293 CLSS------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 293 ~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
..++ ....+....+.+.+....+...+...++..+|...|+.+.+.|+..+. |+-.-..+..++.|.
T Consensus 353 ~~~~~~~~~G~~~~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~ 431 (510)
T KOG3574|consen 353 WTPTLGHSDGTFPRGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADG 431 (510)
T ss_pred hhcccccCCCceeechHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhccc
Confidence 1111 111222234445555556666778888889999999999999988888 666555677888875
Q ss_pred c
Q 014628 361 V 361 (421)
Q Consensus 361 ~ 361 (421)
.
T Consensus 432 l 432 (510)
T KOG3574|consen 432 L 432 (510)
T ss_pred C
Confidence 5
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.44 E-value=1.2e-08 Score=94.99 Aligned_cols=126 Identities=13% Similarity=0.108 Sum_probs=94.7
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHhccCchh
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN 319 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 319 (421)
...+...++.++|.++.|+++||+||| +.+..+.++..+..++....+ +.+.+.+.-++.|++.+...+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 344677789999999999999999999 777777777777777766666 778788888889999999999999
Q ss_pred hhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc---cchhhhHHHHHHH
Q 014628 320 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIF 375 (421)
Q Consensus 320 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~ 375 (421)
.++.|..|+++|+...++.+.... +|..++..+.-.+ .... .|+..+.+.....
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~-~G~~~~~~~~~~~-~~~~~~~~Wr~~~~~~~~~~ 181 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWA-LGILLASLIGYIV-SYYSDNWGWRILLIFGAIPS 181 (451)
T ss_pred cccccccccccccccccccccccc-ccccccccccccc-cccccccccccccccccccc
Confidence 999999999999999999865544 4777766443323 2222 2555555544443
No 251
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.41 E-value=0.00036 Score=62.93 Aligned_cols=57 Identities=11% Similarity=0.098 Sum_probs=42.0
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 361 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 361 (421)
..+..+.....+....+.-++...|..-|+.+.+.|+..+. |+-.-..+.=++.|.+
T Consensus 412 ~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~vL~lVD~f 468 (544)
T PF13000_consen 412 HVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTFVLWLVDYF 468 (544)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHHHHHHhhhc
Confidence 33444555566677788888888899999999999999998 7666555656666654
No 252
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.41 E-value=2.8e-06 Score=80.36 Aligned_cols=131 Identities=16% Similarity=0.123 Sum_probs=103.0
Q ss_pred hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhh
Q 014628 242 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 321 (421)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (421)
..+.+...++..++.++.|+++|++||| ..+..+.++..++.++.....+...+.+.=++.|++.+........+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 3566778899999999999999999999 88888888888888888888899999999999999999998889999
Q ss_pred hhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcc-ccchhhhHHHHHHHHHHH
Q 014628 322 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 322 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~ 379 (421)
..|..|++.||...+..+.... +|..++ .+.+...++. .+|+..+....+..+...
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~-~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~ 223 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFIT-IGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILA 223 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHH-HHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHH
Confidence 9999999999999999976666 477766 4555555432 236654444444433333
No 253
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=98.35 E-value=4.6e-06 Score=68.87 Aligned_cols=120 Identities=15% Similarity=0.110 Sum_probs=87.1
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHH-HhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFA-TAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
++.+++.|.++||+|++-+.+.+..+..+. -....| +++.=+....+.|++.+.........++...|+++.|++.+
T Consensus 314 av~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTayg 391 (459)
T KOG4686|consen 314 AVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYG 391 (459)
T ss_pred hhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHH
Confidence 567899999999999999877665554443 333332 33333566778888887766667778888889999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcch---hHHHHHH-HHHHHHHHHHH
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWG-EAILMLPFAVL 126 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~---wr~~f~~-~~~~~~~~~~~ 126 (421)
..+...++|..+.|++++.+.++-| |--.|.+ .+.+++....+
T Consensus 392 f~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgi 438 (459)
T KOG4686|consen 392 FIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGI 438 (459)
T ss_pred HHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999997644 5444444 44444443333
No 254
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.28 E-value=0.00013 Score=68.79 Aligned_cols=125 Identities=15% Similarity=0.132 Sum_probs=97.9
Q ss_pred chhhHHHHhhhhc-CCchHHHHHHHHHHHHHhhhhhhhh-------------------------HHHHHHHHHHhhhhhh
Q 014628 6 VASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD-------------------------FWSIAICRMLVGVGEA 59 (421)
Q Consensus 6 i~~~~~g~l~Dr~-Grr~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~l~~~r~l~G~~~~ 59 (421)
...+.++.++|-| ||-+++.++.++..++.++..++.. ...++.+.-+..+|.|
T Consensus 88 ~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~g 167 (571)
T KOG1237|consen 88 LLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAG 167 (571)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccC
Confidence 3457899999986 8999999999998888665443321 2356667777788999
Q ss_pred hhccchhhhhhccCC---CC---CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhc
Q 014628 60 SFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 60 ~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
+.-|...+.-+|-++ ++ ++...+.++....+.|..++..+-.++.+..+|.+.|.+..+..++..++.+..
T Consensus 168 g~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 168 GIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred CCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 999999999999998 32 234788999999999999999999999888999999999987766555554443
No 255
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.27 E-value=6.1e-06 Score=63.22 Aligned_cols=99 Identities=10% Similarity=0.156 Sum_probs=85.8
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLS 83 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~ 83 (421)
..+.+++.+.+.+++|.|+.++++.+.+.+-.... +-++.+.++.+-++.|++.+..+.+.-.++.+..++++|++..+
T Consensus 50 ~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~~~~~~ 128 (156)
T PF05978_consen 50 FAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYSTEETIGRNTG 128 (156)
T ss_pred HHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHHhhHHH
Confidence 46778889999999999999999999998655443 56778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhHHHhHHhh
Q 014628 84 MFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l 103 (421)
++-.....+.++|.++.-.+
T Consensus 129 ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 129 IFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 98888888888887765544
No 256
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.27 E-value=0.0026 Score=57.43 Aligned_cols=230 Identities=16% Similarity=0.075 Sum_probs=127.5
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh---------hh-----------------------HHHHHHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---------FD-----------------------FWSIAICR 51 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~---------~~-----------------------~~~l~~~r 51 (421)
..+..++.+++.+++.|.+++-.-+..+....+++++. ++ .|...+.-
T Consensus 75 avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~~~~~~~p~~l~~~ili~~~Ws~s~~Y 154 (509)
T COG3202 75 AVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSRDLFADLPMFLKWFILIVGEWSYSLFY 154 (509)
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHHHHHhhCCccceeeeEeecchHHHHHH
Confidence 45677889999999999999888887777777777653 11 12222222
Q ss_pred HHhhhhhhhhcc-chhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcc----------hhHHHHHHHHHHH
Q 014628 52 MLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL----------NWRYAFWGEAILM 120 (421)
Q Consensus 52 ~l~G~~~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~----------~wr~~f~~~~~~~ 120 (421)
.+.=+-.+.... .-.....|.+..+|-.|..++++.+.+++..++..+..++..+. .-+..+.+.+..+
T Consensus 155 i~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~~~k~~~~~~~~~~~~~~~~~~~vi~~~~ 234 (509)
T COG3202 155 IMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSWLSKHRDALASEFKDLLLQILFIVIVILG 234 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHHHhhchhhHhHHHHHHHHHHHHHHHHHHH
Confidence 222222222222 34566789999999999999999999999999888888876521 1334444444443
Q ss_pred HHHHHHHHhcccccccccCCccccchhhhhhcccccccccCCcccccccchhhhhhhccccchhhhhhhhhhhhhhhHHh
Q 014628 121 LPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVL 200 (421)
Q Consensus 121 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (421)
++...+..+.-+...+......+.+.. ++++ .......++++.+
T Consensus 235 ~i~~~l~~~~~r~il~~~~f~~~~~~k-----------------------------k~~~-------k~k~~~~~s~k~i 278 (509)
T COG3202 235 IIAILLYRYINRNVLTDPLFYLRAKKK-----------------------------KKKK-------KLKLGLIESFKMI 278 (509)
T ss_pred HHHHHHHHHHHhhcccCcchhHHHhcc-----------------------------cccc-------cccCcHHHHHHHH
Confidence 333333333211111110000000000 0000 1112334678888
Q ss_pred hcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccc-hh---HHHhhhhHH-HHHHhhhhhHHHhhhccc
Q 014628 201 LQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM---MFGGVTIVC-GIVGTISGGFILDQMGAT 269 (421)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~-~~~~~~~~g~l~d~~~~~ 269 (421)
.++|.++.+.+...+++.+.+.+-.---.-.+..+..... .. .+....++. .++....++.+.+|.|-.
T Consensus 279 ~~SkyL~~ial~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~ 352 (509)
T COG3202 279 LRSKYLGAIALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWF 352 (509)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHH
Confidence 9999999888888777777665543222222222222211 11 122223333 345556677777777764
No 257
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.24 E-value=2.1e-05 Score=65.50 Aligned_cols=133 Identities=11% Similarity=0.105 Sum_probs=79.1
Q ss_pred HHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh--
Q 014628 218 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL-- 294 (421)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 294 (421)
...+.+..|.|. +++..+.++.+. .+.....++..+ .+..|.+.|++|.+ ..+.++......+.......
T Consensus 16 Gt~Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~~ 88 (250)
T PF06813_consen 16 GTTYTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAVS 88 (250)
T ss_pred CcccchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 345666677775 456788887665 444555566665 58889999999987 66666666555555443322
Q ss_pred -----hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 295 -----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 295 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
.+.|...+..++.+.+.............+.+| ++||++.|+.-...+. ++.+-..+...+.+
T Consensus 89 ~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP-~~RG~vvgilk~~~GL-Saai~t~i~~~~f~ 156 (250)
T PF06813_consen 89 GRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFP-RSRGTVVGILKGFFGL-SAAIFTQIYSAFFG 156 (250)
T ss_pred CccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCc-cccCceehhhhHHHHh-HHHHHHHHHHHHcC
Confidence 123333333334433333333444455566775 6899999999777776 43333334433333
No 258
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.20 E-value=6.6e-05 Score=64.66 Aligned_cols=150 Identities=13% Similarity=0.052 Sum_probs=111.4
Q ss_pred HHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHH
Q 014628 225 YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLAL 303 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (421)
-.++..- +..+.+.... .+++++.++-.+.+++..++.+|+|.+ +.+..+.++..+...+=... +.+..+..
T Consensus 33 PLL~~Ir-~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~e-----r~l~~~Llli~~G~~iR~~~-~~~~L~~g 105 (395)
T COG2807 33 PLLDEIR-QDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEE-----RSLFLALLLIAAGILIRSLG-GLPLLFLG 105 (395)
T ss_pred hhHHHHH-HHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhH-----HHHHHHHHHHHHHHHHHhcc-cHHHHHHH
Confidence 3334333 3355554444 667888888889999999999999988 66666666555555443333 55667777
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHH
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
..+.+.+.+..+...+..+.+.+| ++.+..+|++....+. ++.+++.+...+.++.++|+....+.+...++..+.++
T Consensus 106 t~l~G~gIav~nVLLPslIK~~Fp-k~~~~mtglYs~sl~~-~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~Wl 183 (395)
T COG2807 106 TLLAGAGIAVINVLLPSLIKRDFP-KRVGLMTGLYSTSLGA-GAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWL 183 (395)
T ss_pred HHHHHhhHHHHHHhhhHHHHhhcc-cchhhHHhHHHHHHHH-HHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHh
Confidence 888888888888888999988885 5679999999888887 77888888888888877788888888777766666554
No 259
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.09 E-value=2.1e-06 Score=75.81 Aligned_cols=132 Identities=10% Similarity=-0.049 Sum_probs=99.3
Q ss_pred cccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhH----HHHHHHHHHhhh-hhhhhccchhhhhhccCCCCC
Q 014628 3 GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF----WSIAICRMLVGV-GEASFISLAAPFIDDNAPVPQ 77 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~r~l~G~-~~~~~~~~~~~~i~~~~~~~~ 77 (421)
++.-|..+...+.|+.|||++.+.+.+++++..+..+...|- ..++++-.+..+ +.-+-......+-+|.+|.+-
T Consensus 360 ~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParv 439 (538)
T KOG0252|consen 360 STVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARV 439 (538)
T ss_pred ccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHH
Confidence 344566777889999999999999999999999998887761 112222222222 122222345566789999999
Q ss_pred chhHHHHHHHHHHHHhhhHHHhHHhhhh-----cchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 014628 78 KTAWLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 135 (421)
Q Consensus 78 r~~~~~~~~~~~~~G~~~g~~~~~~l~~-----~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~ 135 (421)
|+...|+..+..-.|.++|.....++.+ ..+-|++|++.+...++..+..++ +||+.
T Consensus 440 R~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk 501 (538)
T KOG0252|consen 440 RSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL-IPETK 501 (538)
T ss_pred hhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE-eeccc
Confidence 9999999999999999999999999988 778999999999887666555544 46754
No 260
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=98.01 E-value=8e-05 Score=67.67 Aligned_cols=135 Identities=12% Similarity=0.074 Sum_probs=77.0
Q ss_pred HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh----h-hhHHHHHHHHHHHHHHHhccCc
Q 014628 243 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----S-SLYGFLALFTVGELLVFATQAP 317 (421)
Q Consensus 243 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 317 (421)
...+...++..++++..|++..|.+.-+ +.++.+.+++.++.++.... + ..+..++.-.+.|++.+ ....
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~ 149 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAV 149 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHH
Confidence 3345677888999999999999988521 44555555555555444221 2 23334444444444432 2344
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh------------ccccchhhhHHHHHHHHHHHHHHH
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 383 (421)
.-.++++..-.++|.++++..+. ...+|.++||.+...+.. .+..|..+-++.+...+...++..
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~-~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSG-GFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhh-HHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 56777776667888888888744 333366666654433321 112455566666666555554444
No 261
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.01 E-value=0.00029 Score=61.14 Aligned_cols=143 Identities=15% Similarity=0.045 Sum_probs=86.6
Q ss_pred HhhCCccchhH-HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 014628 233 NIYHMSNADMM-FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 233 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+.++.+..+.. +.......+.+...+.|.++||+||| +..+...++....++.-. .++.+..++.=++.|...
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k~-~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTKH-SSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHHh-ccccHHHHHHHHHHHHHH
Confidence 45777765553 33445566777888889999999999 788777777777776443 355666666667777777
Q ss_pred HhccCchhhh-hhcc----cCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhcccc-chhhhHHHHHHHHHHHHH
Q 014628 312 FATQAPVNYV-CLHS----VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 312 ~~~~~~~~~~-~~~~----~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~ 381 (421)
...+...-++ +.|. +|++..+...+......+.+-++.+..+..++.+..+. ...+|.....+.+++.++
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~ 211 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVL 211 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHH
Confidence 7666655333 3332 44455555555442122332334445555566665542 345676666665555443
No 262
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.00 E-value=0.0004 Score=63.62 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.+..++..++.++..|-.......+..+.+++++|..+..+.+.+... |-.+|.
T Consensus 371 ~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~-Gl~~Gs 425 (437)
T TIGR00939 371 GDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV-GLALGA 425 (437)
T ss_pred ccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4555666677777777766666777778888888888777777544444 655555
No 263
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=97.91 E-value=0.00024 Score=62.69 Aligned_cols=111 Identities=17% Similarity=0.065 Sum_probs=72.4
Q ss_pred hhhhHHHHHHhhhhhHHHhhhc-----cccchhhHHHHHHHHHHHHHHHHH-----Hhhh-------hhH----HHHHHH
Q 014628 246 GVTIVCGIVGTISGGFILDQMG-----ATISNAFKLLSAATFLGAISCLTA-----FCLS-------SLY----GFLALF 304 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-------~~~----~~~~~~ 304 (421)
.+..+.+ +.++..|+.+|+.+ ||.+ .+..+.+......... .... +.+ .....+
T Consensus 22 al~~~~a-p~R~~~G~~SD~~~s~~G~rRtP----yI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~~~g~~~a~l~F 96 (403)
T PF03209_consen 22 ALHYLVA-PLRVWFGHRSDTHPSILGWRRTP----YIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPFWLGLALAALAF 96 (403)
T ss_pred HHHHHHH-HHHHHhccccccCcccCcCCchh----hhHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHH
Confidence 3333333 46888999999988 5532 2322222222222111 1111 222 234445
Q ss_pred HHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhhccc
Q 014628 305 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 362 (421)
.+.|.+.+....+..++..|..|+++|+++.++...+.- +|.+++..+.|.+.|.+.
T Consensus 97 ~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli-~G~iv~ai~~g~lL~~~s 153 (403)
T PF03209_consen 97 LLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLI-VGIIVSAIVFGRLLDPFS 153 (403)
T ss_pred HHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHH-HHHHHHHHHHHHHccccC
Confidence 567777778888889999999999999999999965554 499999999999988654
No 264
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.82 E-value=0.00052 Score=63.11 Aligned_cols=120 Identities=16% Similarity=0.058 Sum_probs=80.7
Q ss_pred hHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCC
Q 014628 249 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 249 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
.+..++.+...|.++||+||| ..+......+.+......... ++..+... ...+.........+++++....
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk-----~~L~~~~~~~~l~~~~~~~~~--~~~~~~~~-l~g~~~~~~s~~~a~vadis~~ 143 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRK-----VVLLLPLFGTILPALCLLFQG--YWFFLLLG-LSGGFSAIFSVGFAYVADISSE 143 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhh-----hhHHHHHHHHHHhHHHHHHHH--HHHhhhcc-cccchhhhhhhhhhheeeccch
Confidence 566778888999999999998 555555544444444433333 22222222 2233345566778899999989
Q ss_pred chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHH
Q 014628 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 378 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 378 (421)
+.|....|+.+...+. +..++|.+.+.+.+..| +...+.+..+..+..
T Consensus 144 ~~R~~~~gll~~~~~~-~~~~~p~~~~~~~~~~~-~a~~f~ia~~~~~~~ 191 (463)
T KOG2816|consen 144 EERSSSIGLLSGTFGA-GLVIGPALGGYLVKFLG-IALVFLIAAASGILS 191 (463)
T ss_pred hHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHhcC-chHHHHHHHHHHHHH
Confidence 9999999999877777 77889999999988755 445555544443333
No 265
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.79 E-value=0.00047 Score=66.38 Aligned_cols=158 Identities=12% Similarity=-0.011 Sum_probs=96.6
Q ss_pred HHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhh-ccccchhhHHHHHHHHHHHHHHHHHHhhh--
Q 014628 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAATFLGAISCLTAFCLS-- 295 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 295 (421)
++++...+..|+.+..+.+.... .+........-+..+++|+++|++ |++ +.+....++..++..++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence 45556666677777777765433 222333333445677889999975 665 555555555544444433221
Q ss_pred ------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCc---hhhHHHHHHHHHHHhhcccCcchhHHHhhhccc----
Q 014628 296 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---- 362 (421)
Q Consensus 296 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---- 362 (421)
.....++.+.+...+.+..-+...+...+.++++ .+.+...+.....+. |+.+++.+.+++.+..+
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~ 156 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGC 156 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Confidence 1123445566677777777788888888877653 466777777667777 88888888888875542
Q ss_pred --cchhhhHHHHHHHHHHHHHHH
Q 014628 363 --NWRKTTLALTSIFFLAAGIWF 383 (421)
Q Consensus 363 --~~~~~~~~~~~~~~~~~~~~~ 383 (421)
+|...|.+.+++.+++.+++.
T Consensus 157 ~~~~~~aF~i~~i~m~ia~lvf~ 179 (654)
T TIGR00926 157 QDCYPLAFGVPAILMILALIVFM 179 (654)
T ss_pred CcchHHHHHHHHHHHHHHHHHHH
Confidence 355566665555555554444
No 266
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.73 E-value=0.00087 Score=55.26 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=37.1
Q ss_pred CCchhHHHHHHHHHHHHhhhHHHhHHhh---h--hcchhHHHHHHHHHHHHHHHHHHHhc
Q 014628 76 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 76 ~~r~~~~~~~~~~~~~G~~~g~~~~~~l---~--~~~~wr~~f~~~~~~~~~~~~~~~~~ 130 (421)
|+|+....+...+.++|.++.-...-.- . -.-+|++++.+.+++.++-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677777777888888887755432221 1 12359999999998877766666555
No 267
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.58 E-value=0.00086 Score=56.37 Aligned_cols=120 Identities=8% Similarity=-0.122 Sum_probs=78.5
Q ss_pred hHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHH
Q 014628 9 PIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMC 88 (421)
Q Consensus 9 ~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~ 88 (421)
+....+.||+---+=..+..++.+.+.++.+++++.++=+.+-.+..++.|.....-.++-+ .+++. ..+.++.+
T Consensus 80 l~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss-~Y~~~----~i~~WSSG 154 (409)
T KOG3880|consen 80 LTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSS-RYPSI----VIAGWSSG 154 (409)
T ss_pred HhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhc-cCCCc----eeccccCC
Confidence 34455677764333345666777888899999999999888888888888866655444433 33332 34555566
Q ss_pred HHHHhhhHHHhHHhhhh--cchhHHHHHHHHHHHHHHHHHHHhcccc
Q 014628 89 IPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 89 ~~~G~~~g~~~~~~l~~--~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
.+.+.++|..--..+.+ ..+-|...++...+.++.+...++.+++
T Consensus 155 TGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 155 TGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 66556666554444444 3456788888877777777777776643
No 268
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.33 E-value=0.0031 Score=58.22 Aligned_cols=150 Identities=15% Similarity=0.009 Sum_probs=85.4
Q ss_pred hHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh----hhhHHHHH
Q 014628 228 PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSLYGFLA 302 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 302 (421)
..++++.++.++.+. .+..+..+.- ...++.|.++|-+.-...+++..++++.+++.......... .+.....+
T Consensus 13 ~~~l~~~l~ls~~~~~~~~~~~~lPw-~~Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~ 91 (433)
T PF03092_consen 13 YPFLKDDLGLSPAQLQRLSSLASLPW-SIKPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVV 91 (433)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHhCch-HHhhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHH
Confidence 346777788886544 2223322222 34678899999875221122244555555554333322222 23344444
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCC--chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHH
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 380 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 380 (421)
.+++..++........-..+.|.... +.++.-.+....... +|++++..+.|.+.+..+ ++..+.+.+.+..+..+
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~-~G~lv~~~l~G~l~~~~~-~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRS-VGSLVGSLLSGPLLDSFG-PQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHH-HHHHHHHHhhhhhhhcCC-CeEEehHHHHHHHHHHH
Confidence 55555566666656666666666533 237777777754444 488889989999998865 55666666555444443
No 269
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.33 E-value=0.0023 Score=42.60 Aligned_cols=58 Identities=16% Similarity=0.234 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccc
Q 014628 211 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
..+++.......+.-|+|.|+++ .|.++.+. .+.++..+..+++.++.|+++||.+++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~ 65 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKR 65 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcc
Confidence 34566667777888899999987 66776555 445777788999999999999999998
No 270
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.30 E-value=0.015 Score=44.83 Aligned_cols=102 Identities=6% Similarity=-0.083 Sum_probs=75.0
Q ss_pred hhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcc
Q 014628 246 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 325 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (421)
.+......+..++.+.+.+++|.| +.++++.+......... ..++.+..+....+.|++.+..+.....++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 455566677788889999999998 67766666555444333 355677777888889999999999888888888
Q ss_pred cCCchhhHHHHHHHHHHHhhcccCcchhH
Q 014628 326 VKPSLRALSMAISTVSIHIFGDVPSSPLV 354 (421)
Q Consensus 326 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 354 (421)
..++.+++-.++....... +.++|..+.
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~~~ 145 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNLFL 145 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHHHH
Confidence 8888999988887655554 656555443
No 271
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.26 E-value=0.012 Score=52.72 Aligned_cols=128 Identities=10% Similarity=-0.058 Sum_probs=80.4
Q ss_pred HHhhHHHHHh-hCCccchhH--HHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHH
Q 014628 225 YWGPKAGYNI-YHMSNADMM--FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 301 (421)
Q Consensus 225 ~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
.|+..|+.+. .+.+..+.. +.-+..=..++..+....+.|.++.| ..++...+.......++.+.++....-
T Consensus 24 Pfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~sv~~mq 98 (412)
T PF01770_consen 24 PFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTSVLAMQ 98 (412)
T ss_pred ccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCcHHHHH
Confidence 3555677666 677654432 11111123345566778899999988 777777776666666677777777666
Q ss_pred HHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 302 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+.-+..|..... -...++++-..+++++--++.+......- +|..++..++-.+..
T Consensus 99 ~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l-~g~~~s~~lgQllvs 154 (412)
T PF01770_consen 99 LMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATL-VGRFISSLLGQLLVS 154 (412)
T ss_pred HHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 666666555543 44556777788888888888877754433 366666655444444
No 272
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.22 E-value=0.071 Score=48.75 Aligned_cols=172 Identities=14% Similarity=0.041 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-hHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHH--HHHH
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS--AATF 282 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~--~~~~ 282 (421)
.+.+....++..+..-...+-.|.++.+.+..+-.. ..+.....+..++.....|.+.||..|.+.-+..... .+..
T Consensus 4 ~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~ 83 (432)
T PF06963_consen 4 LWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVA 83 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHH
Confidence 344566667777777777788888888886655222 2334445566677788889999999876332111111 1222
Q ss_pred HHHHHHHHHHhhhh-----hHHHHHHH---HHHHHHHHhccC-----chhhhhhccc--CCchhhHHHHHHHHHHHhhcc
Q 014628 283 LGAISCLTAFCLSS-----LYGFLALF---TVGELLVFATQA-----PVNYVCLHSV--KPSLRALSMAISTVSIHIFGD 347 (421)
Q Consensus 283 ~~~~~~~~~~~~~~-----~~~~~~~~---~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~g~ 347 (421)
.+...+........ .+....++ .+.+........ .---++.... +++...+.++... -...+.-
T Consensus 84 ~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mR-RIDL~ck 162 (432)
T PF06963_consen 84 ASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMR-RIDLFCK 162 (432)
T ss_pred HHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHH-HHHHHHH
Confidence 22222222221111 12211111 111111111111 1111122222 3345555666653 3455678
Q ss_pred cCcchhHHHhhhccccchhhhHHHHHHHHHHH
Q 014628 348 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 379 (421)
Q Consensus 348 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 379 (421)
+++|.+.|.+.+..+ +.....+.++..++..
T Consensus 163 llaPl~vG~l~t~~s-~~~~~~~i~~~N~~S~ 193 (432)
T PF06963_consen 163 LLAPLFVGLLMTFAS-PVIAAIFIAGWNLASV 193 (432)
T ss_pred HHHHHHHHHHhhccC-HHHHHHHHHHHHHHHH
Confidence 899999999998765 4444444444444444
No 273
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.20 E-value=0.0046 Score=55.28 Aligned_cols=121 Identities=18% Similarity=0.174 Sum_probs=67.4
Q ss_pred HHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh------hhhHHHHHH
Q 014628 230 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLAL 303 (421)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~ 303 (421)
+..+.|+.+.....+..++.+.+++..+.+.|+.||+|-| .....+...-.++..+=... +..+ . -+
T Consensus 70 ~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~-~-~l 142 (480)
T KOG2563|consen 70 YVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFR-R-PL 142 (480)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccch-h-hh
Confidence 4455555444444666788889999999999999999998 55555555555444432221 1222 1 12
Q ss_pred HHHHHHHHHhccCch----hhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 304 FTVGELLVFATQAPV----NYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
...+....+..++-. .-+...-+++++|+++..+..+.. -+|.+++..+-+.+.
T Consensus 143 ~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n-~LGvavg~llppilV 200 (480)
T KOG2563|consen 143 THTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGN-PLGVAVGFLLPPILV 200 (480)
T ss_pred hHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcc-hHHHHHHhhccceec
Confidence 222222222222221 223334478899999999884443 335555444444443
No 274
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.13 E-value=6.2e-05 Score=70.84 Aligned_cols=133 Identities=10% Similarity=0.005 Sum_probs=1.6
Q ss_pred HHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh---
Q 014628 220 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--- 295 (421)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 295 (421)
..++..-.-.-.++.++.+..+. .+.+..-++.++..++..++.+|..|. +++..+.++.+++.++....+
T Consensus 18 ~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~~lPhf~~ 92 (539)
T PF03137_consen 18 VSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLFALPHFLS 92 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHHhccHhhc
Confidence 33333333334677788876555 344666688888888778887775554 555555555544444332100
Q ss_pred -----------------------------------------------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCC
Q 014628 296 -----------------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKP 328 (421)
Q Consensus 296 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
..+.+++..++.|++....++...+++-|.+++
T Consensus 93 ~~y~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~ 172 (539)
T PF03137_consen 93 GPYSYEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSK 172 (539)
T ss_dssp -----------------------------------------------------------SSS------------------
T ss_pred CCCccccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeecccccc
Confidence 012223334445555555666667778888888
Q ss_pred chhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
+..+...|+.. ....+|-++|-.+++...
T Consensus 173 ~~splYiGi~~-~~~~lGPa~Gf~lg~~~L 201 (539)
T PF03137_consen 173 KNSPLYIGILY-AMSILGPALGFLLGSFCL 201 (539)
T ss_dssp ------------------------------
T ss_pred ccCccchhhhh-HHhhccHHHHHHHHHHHH
Confidence 88888888874 444446666655555444
No 275
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=97.08 E-value=0.0079 Score=53.90 Aligned_cols=149 Identities=10% Similarity=-0.012 Sum_probs=89.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHH
Q 014628 206 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 285 (421)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 285 (421)
........+...+++..-..|.|.|+++.+-............-+.+++..++.|..+||...|..++|..+....+...
T Consensus 34 li~v~~ia~Gvqf~wA~elsy~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~ 113 (498)
T KOG0637|consen 34 LISVASIAAGVQFGWALELSYLTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIA 113 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhccccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHH
Confidence 33334444555666666778899999886544433333333444667778889999999765444433455544444444
Q ss_pred HHHHHHHhhh-----------------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhH-HHHHHHHHHHhhcc
Q 014628 286 ISCLTAFCLS-----------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGD 347 (421)
Q Consensus 286 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~ 347 (421)
+.+.+..+.. .....++.+.+.-+.......+.-++..|...++++.+ +++....+... |+
T Consensus 114 ~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-Gn 192 (498)
T KOG0637|consen 114 VSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GN 192 (498)
T ss_pred HHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cc
Confidence 4433333221 11223334444555666788899999999988876666 88888555555 87
Q ss_pred cCcchhHH
Q 014628 348 VPSSPLVG 355 (421)
Q Consensus 348 ~~~~~~~g 355 (421)
.+|-.+.+
T Consensus 193 vLGY~~g~ 200 (498)
T KOG0637|consen 193 VLGYALGS 200 (498)
T ss_pred eeeeeccc
Confidence 77765444
No 276
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.75 E-value=0.11 Score=48.13 Aligned_cols=56 Identities=7% Similarity=-0.051 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhccC-chhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhh
Q 014628 302 ALFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
+.............+ ..+..+.|...+++..+-.++.....+. |.++++.+..++.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 344444444444444 5577788888888999999999666565 8888887877776
No 277
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.45 E-value=0.00063 Score=59.64 Aligned_cols=55 Identities=18% Similarity=0.061 Sum_probs=2.7
Q ss_pred hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcc
Q 014628 296 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 351 (421)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 351 (421)
+.+..++..++.++..|-..+..+.+..+.+++++|..+..+....... |-.+|.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs 301 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS 301 (309)
T ss_dssp --------------------HHHH--------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4455566666677777666666677777888887777776666444443 655555
No 278
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=96.45 E-value=0.063 Score=46.80 Aligned_cols=133 Identities=17% Similarity=0.052 Sum_probs=77.4
Q ss_pred HHHHhhHHHHHhhCCcc--chhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh--hhH
Q 014628 223 YSYWGPKAGYNIYHMSN--ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLY 298 (421)
Q Consensus 223 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 298 (421)
.....+.+..+...... ..........+...++.+..|.+.||.||| +.............+...... ..+
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (338)
T COG0477 21 LSPALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLA 95 (338)
T ss_pred HHHHHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHH
Confidence 33444555444333321 122334555666777779999999999887 444433322222222222222 244
Q ss_pred HHHHHHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhhc
Q 014628 299 GFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 360 (421)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 360 (421)
...+.....+.+.+...+....+..+..|+ +.|+...+.........|..++|.+.+.+.+.
T Consensus 96 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 96 LLLILRLLQGLGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444444445666666777778888888877 67888888875533444777777666666654
No 279
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=96.43 E-value=0.14 Score=45.76 Aligned_cols=61 Identities=18% Similarity=0.037 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 295 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.+.+..+....+.++..|-..+..+.+..+.++++++..+-.+.. +.-..|-..|. +.+++
T Consensus 341 ~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~-~fl~~Gl~~G~-~~s~l 401 (406)
T KOG1479|consen 341 ESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMV-FFLVGGLALGS-LLSWV 401 (406)
T ss_pred cCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHH-HHHHHHHHHhh-HHHHH
Confidence 355566667777777776666666777888888877666666653 33333555544 44444
No 280
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.30 E-value=0.018 Score=50.19 Aligned_cols=118 Identities=14% Similarity=0.069 Sum_probs=65.1
Q ss_pred cchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhh------hhh------hHHHHHHHHHHh----hhhhhhhccchhhh
Q 014628 5 LVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG------SSF------DFWSIAICRMLV----GVGEASFISLAAPF 68 (421)
Q Consensus 5 ~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~------~~~------~~~~l~~~r~l~----G~~~~~~~~~~~~~ 68 (421)
.+..++.|...|+..|+|++...+.+.-++.+.++ +.+ ++..+..+-++. .++.-........+
T Consensus 77 lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A~~i~i 156 (503)
T KOG2601|consen 77 LVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLAGTILI 156 (503)
T ss_pred HhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhhheEEe
Confidence 45567789999999999998877655433333322 222 344433333332 22222222222223
Q ss_pred hhccC----CCCCchhHH---HHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHH
Q 014628 69 IDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 122 (421)
Q Consensus 69 i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~ 122 (421)
-.||. ..+.+.... +.....-..-..+.|.+.|.+.+..+-|..-.+.++-+++
T Consensus 157 ~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 157 ERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred cccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 34553 233344433 4444455556688899999998887777655555544444
No 281
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.12 E-value=0.035 Score=53.50 Aligned_cols=124 Identities=11% Similarity=-0.020 Sum_probs=68.8
Q ss_pred HHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhh-------------
Q 014628 229 KAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL------------- 294 (421)
Q Consensus 229 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 294 (421)
.-.++.++.+.... .+....-++..+......++..|..|. +++..+.++.++..++....
T Consensus 121 ttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrP-----r~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~ 195 (735)
T KOG3626|consen 121 TTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRP-----RWIGIGLVLMGLGSLLFALPHFFSGPYEYELEV 195 (735)
T ss_pred hhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCcc-----ceeeechhHHHHHHHHHhChHHhcCcchhhhhh
Confidence 34567777765444 333555577777777777777777665 55544444444444333220
Q ss_pred -----------------------------------hh----hHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHH
Q 014628 295 -----------------------------------SS----LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSM 335 (421)
Q Consensus 295 -----------------------------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 335 (421)
.+ +..++...++.|.+....++...+++-|.+.+++.+...
T Consensus 196 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk~~~SplYl 275 (735)
T KOG3626|consen 196 IKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVKKKNSPLYL 275 (735)
T ss_pred hhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCccccccccccCCcHHH
Confidence 00 112223333344444455555566777777777888888
Q ss_pred HHHHHHHHhhcccCcchhHHHhh
Q 014628 336 AISTVSIHIFGDVPSSPLVGVLQ 358 (421)
Q Consensus 336 g~~~~~~~~~g~~~~~~~~g~l~ 358 (421)
|+.+ .+..+|-++|-.+++...
T Consensus 276 gi~~-~~~~lGPaiGfllgS~~l 297 (735)
T KOG3626|consen 276 GILY-SMAILGPAIGFLLGSFCL 297 (735)
T ss_pred HHHH-HHHHhhhHHHHHHHHHHH
Confidence 8884 445546555554545443
No 282
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=96.10 E-value=0.061 Score=36.25 Aligned_cols=78 Identities=15% Similarity=0.116 Sum_probs=54.0
Q ss_pred HHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhh
Q 014628 217 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 295 (421)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (421)
..+-+.+...+|...++ .+.+..+. .+.+...++..+|.+...++.++..++ +.+..+.+........+...+
T Consensus 5 GigRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~ 78 (85)
T PF06779_consen 5 GIGRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTH 78 (85)
T ss_pred hhHHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHh
Confidence 34455666677876555 66665444 666888899999999999888875555 666777777777776666666
Q ss_pred hhHHH
Q 014628 296 SLYGF 300 (421)
Q Consensus 296 ~~~~~ 300 (421)
+.+.+
T Consensus 79 ~~~~w 83 (85)
T PF06779_consen 79 SFWLW 83 (85)
T ss_pred chHHH
Confidence 55443
No 283
>PRK03612 spermidine synthase; Provisional
Probab=95.84 E-value=0.62 Score=44.17 Aligned_cols=59 Identities=8% Similarity=-0.067 Sum_probs=32.1
Q ss_pred HHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh-ccccc
Q 014628 304 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVNNW 364 (421)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~g~~ 364 (421)
.++.+++.++..|....+..+.. .+..+...|-.+ ..+.+|+++|+.+.+++.- ..|..
T Consensus 117 ~~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly-~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 117 VLLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVL-AADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhH-hHHhHHHHHHHHHHHHHHHHhcchH
Confidence 33445666666555444443322 222345555553 4455588888888877755 45533
No 284
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.83 E-value=0.087 Score=48.27 Aligned_cols=99 Identities=15% Similarity=0.198 Sum_probs=76.6
Q ss_pred cccchhhHHHHhhh---hcCCchHHHHHHHHHHHHHhhhhhh------------------hhHHHHHHHHHHhhhhhhhh
Q 014628 3 GLLVASPIFASLAK---SHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAICRMLVGVGEASF 61 (421)
Q Consensus 3 g~~i~~~~~g~l~D---r~Grr~~~~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~~~~ 61 (421)
|..+++.+.+.+.+ ++||++++.++..+..++.++.-.. +++...++.-++.|++.+..
T Consensus 291 g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~ 370 (461)
T KOG3098|consen 291 GEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACF 370 (461)
T ss_pred HHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHH
Confidence 34455666666664 5899999999988888877775432 34667788889999999999
Q ss_pred ccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHh
Q 014628 62 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 102 (421)
Q Consensus 62 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 102 (421)
....+.++.+.+ +++|..+.++...-..++..++-.....
T Consensus 371 ~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~ 410 (461)
T KOG3098|consen 371 NTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPY 410 (461)
T ss_pred HHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 999999999999 5668889998888888777666555443
No 285
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=95.73 E-value=0.48 Score=42.54 Aligned_cols=116 Identities=8% Similarity=-0.061 Sum_probs=50.3
Q ss_pred HHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHh--
Q 014628 216 YNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-- 293 (421)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 293 (421)
.....+.+.+-.+.|.++..+.+. +..+.....+.+.+..++...+--+...|.+.+.........+..+..+....
T Consensus 30 ~LlpWN~fiTa~~y~~~~~~~~~~-~~~F~~~~~~~a~i~~ll~~~~n~~~~~~~~~~~~~~l~~~~il~i~~l~~~~v~ 108 (406)
T KOG1479|consen 30 TLLPWNMFITASDYYYYRFPGYHN-SKNFTSSYTLAAQIPLLLFNLLNAFLNTRLRTRVGYLLSLIAILFIVTLDLALVK 108 (406)
T ss_pred cccchHhhhccHHHHHhhcCCCch-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 334466666666666555444444 43444444444444444444444443333211111111111111111111111
Q ss_pred h-----hhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhH
Q 014628 294 L-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 333 (421)
Q Consensus 294 ~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (421)
. ......++...+.+.+.+...+..+..... +|++....
T Consensus 109 ~~~~~~~ff~vt~~~vv~~~~a~a~~qgs~~G~a~~-~P~~ytqa 152 (406)
T KOG1479|consen 109 TDTWTNGFFLVTLIIVVLLNLANAVVQGSLYGLAGL-FPSEYTQA 152 (406)
T ss_pred cCCccchhHHHHHHHHHHHhhhhhhhccchhhhhhc-CCHHHHHH
Confidence 1 123334445555666666666666655444 67765443
No 286
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.48 E-value=0.8 Score=42.87 Aligned_cols=57 Identities=11% Similarity=0.005 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHhccCc-hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHhhh
Q 014628 302 ALFTVGELLVFATQAP-VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 359 (421)
Q Consensus 302 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 359 (421)
+..+..-.......+. .+..+.+....++..+-.++.....+. |.+++..+..++.+
T Consensus 148 lfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 148 LFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3333333333343442 466677777778889999999666666 77777766666666
No 287
>PRK03612 spermidine synthase; Provisional
Probab=95.34 E-value=0.13 Score=48.64 Aligned_cols=77 Identities=13% Similarity=-0.032 Sum_probs=50.1
Q ss_pred HHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhh-hcchhHHHHHHHHHHHHHHHH
Q 014628 48 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAV 125 (421)
Q Consensus 48 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~-~~~~wr~~f~~~~~~~~~~~~ 125 (421)
+..-++.++..|+..|....+..+... ++-++..|..+....+|.++|.++.+++. +.+|-....++.+.+.+..++
T Consensus 114 ~~~~~~~~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~ 191 (521)
T PRK03612 114 YVLVLLIGLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAAL 191 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 334556677888887777766655332 23567788888899999999999887754 456654444444444444443
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=95.22 E-value=0.02 Score=38.50 Aligned_cols=47 Identities=28% Similarity=0.508 Sum_probs=43.0
Q ss_pred ccccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHH
Q 014628 2 VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 48 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 48 (421)
+||.+|++...++.++..+++.+..+.+...+..+.+++.++.+.+.
T Consensus 38 ~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 38 LGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 68999999999999998899999999999999999999999887653
No 289
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=95.15 E-value=0.093 Score=47.22 Aligned_cols=68 Identities=12% Similarity=0.080 Sum_probs=60.6
Q ss_pred hhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh
Q 014628 38 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 105 (421)
Q Consensus 38 ~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 105 (421)
.-+.++.|.+++.-+..|+..|..+......+.|-.++++|..+++..+.+-++|..++.+++-.+-+
T Consensus 329 ~~fipsi~ivf~lif~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~le~ 396 (402)
T PF02487_consen 329 YRFIPSIWIVFVLIFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPLEP 396 (402)
T ss_pred HHHhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33568899999999999999999999999999999999999999999999999999999988876543
No 290
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=94.73 E-value=0.11 Score=47.03 Aligned_cols=86 Identities=15% Similarity=0.055 Sum_probs=66.4
Q ss_pred HHHHHHHHHHHHHHHhccCchhhhhhcccCCc---hhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHH
Q 014628 298 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 374 (421)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 374 (421)
..+.+.+.+...+.++.=+.......|.++++ .|.+.........+. |..+++...+++.++.| |...|.+.++.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 45667777788888888888899999988875 566677777777787 88888888999998866 77888888877
Q ss_pred HHHHHHHHHHh
Q 014628 375 FFLAAGIWFVG 385 (421)
Q Consensus 375 ~~~~~~~~~~~ 385 (421)
.+++.+.++..
T Consensus 112 ~~~~~~~f~~~ 122 (372)
T PF00854_consen 112 MLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHHhC
Confidence 77777666543
No 291
>PF12832 MFS_1_like: MFS_1 like family
Probab=94.06 E-value=0.057 Score=35.90 Aligned_cols=28 Identities=21% Similarity=0.323 Sum_probs=23.2
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHH
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVW 31 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~ 31 (421)
..++++++|.++||+++++.++....++
T Consensus 48 ~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 48 RFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred HHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 3578999999999999999887766554
No 292
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=91.60 E-value=8.8 Score=33.60 Aligned_cols=70 Identities=7% Similarity=0.111 Sum_probs=55.2
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCC
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
.+..+++.+.+..++|-|.++.++...+...-. .=+=+.+..++-.-...|++.+..+..--+|+++.-.
T Consensus 71 l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA-~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~ 140 (390)
T KOG3097|consen 71 LIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIA-ANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQ 140 (390)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH-hhcchhHHhhccHHHhhccccccccccCcceecHHHH
Confidence 355677888899999999999998887765332 2344678899999999999999999887777776644
No 293
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.34 E-value=1.2 Score=41.22 Aligned_cols=39 Identities=21% Similarity=0.108 Sum_probs=23.0
Q ss_pred hhhhhhcccCCchhhHHHHHHHHHHHhhcccCcchhHHHh
Q 014628 318 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 357 (421)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 357 (421)
.-.+......+++++-|........+. |.+++-.++=.+
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvFlal 177 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVFLAL 177 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHHHhh
Confidence 445556667778787777776444444 766655444333
No 294
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=91.28 E-value=2.6 Score=37.56 Aligned_cols=139 Identities=13% Similarity=0.100 Sum_probs=62.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-hHHHhhhhHHHHHHhhhhhHHHh-----hhccccchhhHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILD-----QMGATISNAFKLL 277 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~~~~ 277 (421)
+.+..+.+.+...+..+.... -+|.+++. .+.+... ..+....+-- ---++...++| |+|||+. .+
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~--sLKllWaPiVDs~y~k~~Grrks----Wv 102 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPF--SLKLLWAPIVDSVYSKRFGRRKS----WV 102 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHH--HHHHHHHhhhHHHHHHhhccccc----ee
Confidence 445555555555555554444 78888874 3343222 2222111111 11334555666 8999843 23
Q ss_pred HHHHHHHHHHH-HHHHhhh----------hhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHHHHHHhhc
Q 014628 278 SAATFLGAISC-LTAFCLS----------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFG 346 (421)
Q Consensus 278 ~~~~~~~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 346 (421)
+-+..+.+..+ ++....+ +.......+++..+....--...-.+......+++.|-++......... |
T Consensus 103 vp~q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~-G 181 (510)
T KOG3574|consen 103 VPCQYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTA-G 181 (510)
T ss_pred eehHHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhh-h
Confidence 33333333322 2222211 1111222333344444433334455566666777666666555333333 5
Q ss_pred ccCcc
Q 014628 347 DVPSS 351 (421)
Q Consensus 347 ~~~~~ 351 (421)
.+++.
T Consensus 182 yfL~~ 186 (510)
T KOG3574|consen 182 YFLGN 186 (510)
T ss_pred HHhhc
Confidence 55443
No 295
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=89.97 E-value=7.3 Score=37.54 Aligned_cols=166 Identities=11% Similarity=-0.006 Sum_probs=89.7
Q ss_pred HHHHHHHHHHHHHhhHHHHHhhCCccchh-HHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHH
Q 014628 214 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 292 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (421)
.+-...+++....+-.|+.+..+.+...+ -.............+.+++++|-+--|. +.+.++.++...+..++.
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 44455566666666677777776664322 2223333444566678899999764431 444444444433322221
Q ss_pred hhh----------------------h---hHHHHHHHHHHHHHHHhccCchhhhhhcccCC----chhh--HHHHHHHHH
Q 014628 293 CLS----------------------S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKP----SLRA--LSMAISTVS 341 (421)
Q Consensus 293 ~~~----------------------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~--~~~g~~~~~ 341 (421)
... + ...+...+.+...+.++.-+...+.-.|-+++ +.+. .-+......
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 110 0 01222233333345556667777788887772 2222 444455444
Q ss_pred HHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHHHHHh
Q 014628 342 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 385 (421)
Q Consensus 342 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 385 (421)
.+. |..++..+..++.|..+ |...+.....+..++.++++..
T Consensus 203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHcC
Confidence 444 66666666666666644 7777877777766666655543
No 296
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=89.17 E-value=10 Score=35.26 Aligned_cols=33 Identities=6% Similarity=-0.126 Sum_probs=19.0
Q ss_pred hHHHHHHHHHHHHHHHhccCchhhhhhcccCCch
Q 014628 297 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 330 (421)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
.+..++..++.+++.+...+....+.. .+|++.
T Consensus 106 f~~~~~~v~~~g~~~~~~q~s~~gla~-~fp~~~ 138 (437)
T TIGR00939 106 FVTTMASVVIINSGMALLQGSLFGLAG-VFPSTY 138 (437)
T ss_pred HHHHHHHHHHHHhhhhhhcccchhhcc-cCCHHH
Confidence 334445555566666666666666554 466654
No 297
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=85.14 E-value=11 Score=30.93 Aligned_cols=43 Identities=12% Similarity=0.173 Sum_probs=25.4
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHH
Q 014628 71 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 113 (421)
Q Consensus 71 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f 113 (421)
|+..+|++.+.-.......-++..+|..+++.+.+..+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~ 195 (209)
T PF06912_consen 153 RYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALL 195 (209)
T ss_pred HHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 4433444434445555666667777777777777776753333
No 298
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=83.50 E-value=4.5 Score=28.33 Aligned_cols=35 Identities=17% Similarity=0.235 Sum_probs=23.4
Q ss_pred chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccc
Q 014628 329 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 364 (421)
Q Consensus 329 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 364 (421)
+.++.+.++- ....++++++-....||+.|++-+-
T Consensus 38 s~k~~~~a~k-lssefIsGilVGa~iG~llD~~agT 72 (116)
T COG5336 38 SIKGYAQAFK-LSSEFISGILVGAGIGWLLDKFAGT 72 (116)
T ss_pred hhhhhhhhHH-HHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 4566777766 4555556665566889999987543
No 299
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=83.40 E-value=3.6 Score=35.54 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=61.6
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhh
Q 014628 29 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
+++.+...+..+.++++...+.-+.-|+-.|..+....--+.+-.++++|-.+++....+-++|..++..++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 444555556677889999999999999988888888877788888889999999999999999998888777554
No 300
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=81.52 E-value=11 Score=34.43 Aligned_cols=19 Identities=26% Similarity=0.424 Sum_probs=10.9
Q ss_pred HHHHHHhhhhhHHHhhhcc
Q 014628 250 VCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~ 268 (421)
+..++..+..|++..|.+-
T Consensus 6 i~~i~~ii~~G~~~~~~~~ 24 (385)
T PF03547_consen 6 ILPIFLIILLGYLLGRFGI 24 (385)
T ss_pred HHHHHHHHHHHHHHHHhCC
Confidence 3344455566777776643
No 301
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=79.99 E-value=34 Score=32.71 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=14.3
Q ss_pred hhhhHHHHHHhhhhhHHHhhhccc
Q 014628 246 GVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
....+++.++...++++...++.+
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCC
Confidence 334455566666666666666654
No 302
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=79.16 E-value=1.6 Score=36.81 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=35.5
Q ss_pred HHHHHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCch-hhhhhccc
Q 014628 251 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV-NYVCLHSV 326 (421)
Q Consensus 251 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 326 (421)
..++...+.|-++||.||| +..+..++.....|+.= ..+..-..++.=.++|......++.. .+++.|..
T Consensus 84 SsmLFGtivgSLaDkqGRK-----racvtycitYiLsCiTK-hSpqYkVLmVGR~LGGiaTsLLFSaFEsWliaEHn 154 (454)
T KOG4332|consen 84 SSMLFGTIVGSLADKQGRK-----RACVTYCITYILSCITK-HSPQYKVLMVGRVLGGIATSLLFSAFESWLIAEHN 154 (454)
T ss_pred hHHHHHHHHHHHHhhhccc-----cceeeehHHHHHHHHhh-cCCceEEEeehhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 3455566678899999998 44433333333333221 12222333444455555555444444 44555554
No 303
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=77.96 E-value=40 Score=28.52 Aligned_cols=22 Identities=5% Similarity=-0.208 Sum_probs=11.1
Q ss_pred HHHHHHHHHHHHHhhHHHHHhh
Q 014628 214 IAYNFVIGAYSYWGPKAGYNIY 235 (421)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~ 235 (421)
.......++..+.=..|.+++.
T Consensus 188 Av~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 188 AVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHHHhcccchHHHHHhCc
Confidence 3444445555554445666554
No 304
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.90 E-value=4.1 Score=28.53 Aligned_cols=18 Identities=6% Similarity=-0.226 Sum_probs=8.7
Q ss_pred hHHHHhhhhc-CCchHHHH
Q 014628 9 PIFASLAKSH-NPFRLIGV 26 (421)
Q Consensus 9 ~~~g~l~Dr~-Grr~~~~~ 26 (421)
...||+.||| |-+++.++
T Consensus 60 a~iG~llD~~agTsPwglI 78 (116)
T COG5336 60 AGIGWLLDKFAGTSPWGLI 78 (116)
T ss_pred HHHHHHHHHhcCCCcHHHH
Confidence 3445666654 44444333
No 305
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=72.78 E-value=57 Score=27.48 Aligned_cols=20 Identities=15% Similarity=0.524 Sum_probs=12.0
Q ss_pred HHHHHHhhhhhHHHhhhccc
Q 014628 250 VCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 250 ~~~~~~~~~~g~l~d~~~~~ 269 (421)
+|..+..+.+-+++.|+..|
T Consensus 251 lCT~lAVigGk~lAskIS~r 270 (294)
T KOG2881|consen 251 LCTGLAVIGGKYLASKISVR 270 (294)
T ss_pred HHHHHHHhhhHHHhhhheeE
Confidence 44444444555677788776
No 306
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=67.35 E-value=1.1e+02 Score=28.76 Aligned_cols=80 Identities=10% Similarity=-0.013 Sum_probs=44.1
Q ss_pred HHHHHHHHHHhccCchhhhhhcccCC-chhhHHHHHHHHHHHhhcccCcchhHHHhhhccccchhhhHHHHHHHHHHHHH
Q 014628 303 LFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 381 (421)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 381 (421)
.....+.+.+..-.+.-.-+.+.+|. +.++..+|-.+...+....++.-..++-+....| |-....+.-.+.++..++
T Consensus 290 ~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~litg~l 368 (509)
T COG3202 290 LVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLITGVL 368 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHHHHH
Confidence 33344555555555556666777776 4567777766555555434444555666666655 545544444444444433
Q ss_pred HH
Q 014628 382 WF 383 (421)
Q Consensus 382 ~~ 383 (421)
++
T Consensus 369 FF 370 (509)
T COG3202 369 FF 370 (509)
T ss_pred HH
Confidence 33
No 307
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=65.52 E-value=14 Score=28.66 Aligned_cols=9 Identities=11% Similarity=0.346 Sum_probs=3.6
Q ss_pred hhhHHHHHH
Q 014628 366 KTTLALTSI 374 (421)
Q Consensus 366 ~~~~~~~~~ 374 (421)
..++++.++
T Consensus 96 R~~~Vl~g~ 104 (163)
T PF06679_consen 96 RALYVLVGL 104 (163)
T ss_pred hhHHHHHHH
Confidence 344444333
No 308
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=65.35 E-value=1.1e+02 Score=28.07 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=20.8
Q ss_pred CchhHHHHHHHHHHHHhhhHHHhHHhhhhcchh
Q 014628 77 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 109 (421)
Q Consensus 77 ~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~w 109 (421)
+|.+...+.......+..+-|+++-+.-...||
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 477777777777777777777765554332344
No 309
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.60 E-value=37 Score=26.04 Aligned_cols=79 Identities=9% Similarity=-0.009 Sum_probs=48.0
Q ss_pred HhhhhcCCchHHHHHHHHHHHHHhhhhh-----------hhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 13 SLAKSHNPFRLIGVGLSVWTFATAGCGS-----------SFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 13 ~l~Dr~Grr~~~~~~~~~~~~~~~~~~~-----------~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.++||.-||..+..|. -.+++...+.. .+++..++..-.+.|+|.- ...|.+++.-.++++-|..
T Consensus 56 ~Vs~RM~rRm~~~~Gi-P~~lG~~~f~~~y~l~~~~~~dvP~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSl 131 (153)
T PF11947_consen 56 VVSNRMLRRMAVFVGI-PTALGVAVFVVFYYLKSRQIVDVPPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSL 131 (153)
T ss_pred HHHHHHHHHHHHHhch-HHHHHHHHHHHHHHHHhccccccCchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCc
Confidence 4678886666544443 22222222211 2445555655555555543 3467777888888889999
Q ss_pred HHHHHHHHHHHhhh
Q 014628 82 LSMFYMCIPTGVAL 95 (421)
Q Consensus 82 ~~~~~~~~~~G~~~ 95 (421)
+|+-..-.+++-+.
T Consensus 132 lG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 132 LGWEEFKRNWGRMW 145 (153)
T ss_pred ccHHHHHHhHHHHH
Confidence 99988888876544
No 310
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=55.35 E-value=87 Score=27.17 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHhhhhhh-hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhh
Q 014628 25 GVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 25 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
+.+.+++++++++..+. ++.+.+.+.-++.+++.++....+ +|+...|+......+=.+.++.-+.
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~~~G-----------~r~~~i~~~~Ll~~v~t~~~~~~~~-- 69 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLGVYG-----------PRAATIGFATLLVAVYTMAGPSPGP-- 69 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh-----------hHHHHHHHHHHHHHHHHHhCCCcch--
Confidence 44555564555555544 445555555566665555433211 2444444333333322222222111
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 014628 104 GSHLNWRYAFWGEAILMLPFAVLAFVIKPL 133 (421)
Q Consensus 104 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~ 133 (421)
+.+.--..+.+.++...+..++++.+.|.
T Consensus 70 -~~~~~~~l~~~Gglwy~~lsl~~~~l~p~ 98 (284)
T PF12805_consen 70 -EALEHALLFLAGGLWYLLLSLLWWPLRPY 98 (284)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 11111233455555566666666666565
No 311
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=55.30 E-value=1.8e+02 Score=27.15 Aligned_cols=43 Identities=19% Similarity=0.033 Sum_probs=29.9
Q ss_pred CCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHH
Q 014628 73 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 120 (421)
Q Consensus 73 ~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~ 120 (421)
..+++.+...++.+++.+.|...-|...+.. |=++..+..+++
T Consensus 17 w~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-----Gf~p~lillll~ 59 (443)
T PRK13629 17 WRKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-----GLIPILLMLVLA 59 (443)
T ss_pred CccccchHHHHHHHHHHhHHHHHHHHHHhcc-----hHHHHHHHHHHH
Confidence 3455678899999999999988888876643 445555444433
No 312
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=52.52 E-value=20 Score=30.30 Aligned_cols=8 Identities=25% Similarity=0.322 Sum_probs=3.3
Q ss_pred hHHHhhhc
Q 014628 353 LVGVLQDH 360 (421)
Q Consensus 353 ~~g~l~~~ 360 (421)
+.||...+
T Consensus 94 l~Gw~~gr 101 (254)
T PF07857_consen 94 LTGWASGR 101 (254)
T ss_pred HHHHHHhh
Confidence 34444433
No 313
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=51.38 E-value=1.6e+02 Score=25.43 Aligned_cols=67 Identities=13% Similarity=0.071 Sum_probs=30.1
Q ss_pred hhHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccc
Q 014628 196 DTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
..+++.++|+.+..................|.| +.++.-+.+.++..-+.+..++|.++ +-||+.|-
T Consensus 61 ~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n~g~~leaSLGY~InPL~~VllG~lf---lkErls~~ 127 (293)
T COG2962 61 ELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV----NNGHVLEASLGYFINPLVNVLLGRLF---LKERLSRL 127 (293)
T ss_pred HHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec----CCCchhHHHhHHHHHHHHHHHHHHHH---HHhhccHH
Confidence 445567777766655544443333333333333 22222222233333333333444433 45666554
No 314
>PRK10263 DNA translocase FtsK; Provisional
Probab=49.40 E-value=2.1e+02 Score=30.80 Aligned_cols=22 Identities=14% Similarity=0.237 Sum_probs=13.7
Q ss_pred hhhHHHHHHhhhhhHHHhhhcc
Q 014628 247 VTIVCGIVGTISGGFILDQMGA 268 (421)
Q Consensus 247 ~~~~~~~~~~~~~g~l~d~~~~ 268 (421)
+.+.++.+|..+...+..-+|.
T Consensus 60 V~Nl~GiVGA~LAD~L~~LFGl 81 (1355)
T PRK10263 60 IHNLGGMPGAWLADTLFFIFGV 81 (1355)
T ss_pred cccccchHHHHHHHHHHHHHhH
Confidence 3456666666666666666664
No 315
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=49.30 E-value=5.3 Score=35.11 Aligned_cols=61 Identities=15% Similarity=0.120 Sum_probs=3.6
Q ss_pred hhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHh
Q 014628 42 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 102 (421)
Q Consensus 42 ~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 102 (421)
+|-+..++.-++.|+..|-.......+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 246 ~~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 246 NSDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp ---------------------HHHH------------------------------------
T ss_pred cchHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556778889999999998888999999999999999988888888888888888876643
No 316
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=47.91 E-value=1.3e+02 Score=23.52 Aligned_cols=58 Identities=10% Similarity=-0.016 Sum_probs=34.8
Q ss_pred ccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhh-cc-----hhHHHHHHHHHHHHHHHHHHH
Q 014628 71 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HL-----NWRYAFWGEAILMLPFAVLAF 128 (421)
Q Consensus 71 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~-~~-----~wr~~f~~~~~~~~~~~~~~~ 128 (421)
..+|.+++.+..+.+.++.-.+...--.+=+.+.. +. .+...+++.++++.+..++.=
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN 76 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVN 76 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhc
Confidence 34566667777777666666555444444333332 22 577888888887766655443
No 317
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=47.83 E-value=2.2e+02 Score=26.02 Aligned_cols=61 Identities=16% Similarity=-0.000 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHhhCCccch-hHHHhhhhHHHHHHhhhhhHHHhhhcccc
Q 014628 210 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATI 270 (421)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 270 (421)
.++++...+.--...+-...|+...++-+-.- +....+-.....+...+.|...|+..|.+
T Consensus 33 y~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~K 94 (503)
T KOG2601|consen 33 YLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVK 94 (503)
T ss_pred hHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHH
Confidence 33444444443334444455566655533211 12222233333444555677778888873
No 318
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=47.25 E-value=57 Score=25.04 Aligned_cols=32 Identities=6% Similarity=-0.112 Sum_probs=21.1
Q ss_pred hccCchhhhhhcccCCchhhHHHHHHHHHHHh
Q 014628 313 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 344 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 344 (421)
+..+..|.+++..-.++..|+..|+-..-.+.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 33445666777777778788888887544443
No 319
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=46.99 E-value=87 Score=26.68 Aligned_cols=89 Identities=10% Similarity=0.030 Sum_probs=46.5
Q ss_pred cccchhhHHHHhhhh-cCCchHHH----HHHHHHHHHHhhhhh-h----hhHHHHHHHHHHhhhhhhhhccchhhhhhcc
Q 014628 3 GLLVASPIFASLAKS-HNPFRLIG----VGLSVWTFATAGCGS-S----FDFWSIAICRMLVGVGEASFISLAAPFIDDN 72 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr-~Grr~~~~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 72 (421)
|+.+|....|+.... +-||+.+. .+++++.++.++... . .++..+++.-++.|+..=+.+++...+=.|+
T Consensus 153 g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ViL~lPhEy 232 (267)
T PF07672_consen 153 GYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGVILNLPHEY 232 (267)
T ss_pred HHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHHHhcChhhh
Confidence 445555556666543 45666544 334444444444211 1 2466788888888876655665554444443
Q ss_pred --CCCCCchhHHHHHHHHHHHHhh
Q 014628 73 --APVPQKTAWLSMFYMCIPTGVA 94 (421)
Q Consensus 73 --~~~~~r~~~~~~~~~~~~~G~~ 94 (421)
.+|++-|..+| ..+++|.+
T Consensus 233 K~~~pk~ig~~Fg---~iWGfGY~ 253 (267)
T PF07672_consen 233 KGYNPKKIGIQFG---LIWGFGYI 253 (267)
T ss_pred cCCCcceehhHHH---HHHHHHHH
Confidence 33444444444 44554443
No 320
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=46.47 E-value=19 Score=32.02 Aligned_cols=86 Identities=16% Similarity=0.030 Sum_probs=64.6
Q ss_pred ccchhhHHHHhhhhcCCch--HHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCCCCCchhH
Q 014628 4 LLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAW 81 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~ 81 (421)
.+++.+..|++--++.|.. .+.++.+.-+...++++.++++|..+++-++.+.......+.+..-+++....+.-|..
T Consensus 284 Ga~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLv 363 (433)
T KOG3810|consen 284 GAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLV 363 (433)
T ss_pred HHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheee
Confidence 3567777888877766653 45555666666677778888999988888888877777788888888888888888888
Q ss_pred HHHHHHHH
Q 014628 82 LSMFYMCI 89 (421)
Q Consensus 82 ~~~~~~~~ 89 (421)
+|+.....
T Consensus 364 FGiNTFvA 371 (433)
T KOG3810|consen 364 FGINTFVA 371 (433)
T ss_pred eehHHHHH
Confidence 88765544
No 321
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=43.21 E-value=33 Score=24.39 Aligned_cols=31 Identities=19% Similarity=0.217 Sum_probs=23.7
Q ss_pred hhcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 014628 104 GSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 134 (421)
Q Consensus 104 ~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~ 134 (421)
.+..+|+.+|++...++++.+.+.+.+.|++
T Consensus 54 ~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 54 RDWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred chHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 3566899999998877777777777777764
No 322
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=41.96 E-value=1.7e+02 Score=29.42 Aligned_cols=51 Identities=18% Similarity=0.076 Sum_probs=33.3
Q ss_pred HHHHhhhhc----CCchHHHHHHHHHHHHHhhhhhhhhHH-HHHHHHHHhhhhhhh
Q 014628 10 IFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFDFW-SIAICRMLVGVGEAS 60 (421)
Q Consensus 10 ~~g~l~Dr~----Grr~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~r~l~G~~~~~ 60 (421)
+.+-+.|.= ||.+-++++.++++++++...+...+. .+...-++.+++.++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~m 97 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFIL 97 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHH
Confidence 445566654 457778888889988888877665544 444455555555543
No 323
>PRK10720 uracil transporter; Provisional
Probab=41.85 E-value=3e+02 Score=25.72 Aligned_cols=28 Identities=18% Similarity=-0.156 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccccc
Q 014628 110 RYAFWGEAILMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 110 r~~f~~~~~~~~~~~~~~~~~~p~~~~~ 137 (421)
+..+...-..+.+.+++.-.+.|...++
T Consensus 384 ~~~~~~gi~~g~~~ai~Lnlll~~~~~~ 411 (428)
T PRK10720 384 GAAELKGMALATIVGIGLSLIFKLISKL 411 (428)
T ss_pred HHHhcCcHHHHHHHHHHHHHHhcccccc
Confidence 3333333333444455544455654444
No 324
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=41.68 E-value=2.4e+02 Score=24.57 Aligned_cols=56 Identities=11% Similarity=0.141 Sum_probs=35.3
Q ss_pred HHHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhh
Q 014628 47 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 103 (421)
Q Consensus 47 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l 103 (421)
.-..|.+.|+-.- .+..++++++-.||++++--..--...+.++..++-|++|-.+
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l 77 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLL 77 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5668988887775 4467889999999976554333333444444455555555443
No 325
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=41.56 E-value=1.4e+02 Score=30.00 Aligned_cols=52 Identities=17% Similarity=0.175 Sum_probs=33.0
Q ss_pred hHHHHhhhhc----CCchHHHHHHHHHHHHHhhhhhhhh-HHHHHHHHHHhhhhhhh
Q 014628 9 PIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEAS 60 (421)
Q Consensus 9 ~~~g~l~Dr~----Grr~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~~~~~ 60 (421)
.+.+-++|.= ||.+-++++.++++++++...+... .+.+...-++.+++.++
T Consensus 41 ~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~m 97 (704)
T TIGR01666 41 IIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIM 97 (704)
T ss_pred HHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 3456677653 5666778888888888877766544 44555555555555543
No 326
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=40.17 E-value=90 Score=19.28 Aligned_cols=42 Identities=21% Similarity=0.244 Sum_probs=27.4
Q ss_pred HHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHh
Q 014628 88 CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 129 (421)
Q Consensus 88 ~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~ 129 (421)
+.-+|.++|...+..-...+++.....+..+.+++..++...
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~ 51 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAV 51 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 445677777777766666677777777666666655555443
No 327
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=39.68 E-value=3.1e+02 Score=25.34 Aligned_cols=18 Identities=11% Similarity=0.290 Sum_probs=9.9
Q ss_pred hhHHHhHHhhhhcchhHH
Q 014628 94 ALGYVYGGVVGSHLNWRY 111 (421)
Q Consensus 94 ~~g~~~~~~l~~~~~wr~ 111 (421)
....++.+.+.+....+.
T Consensus 105 ~t~~I~sGavaeR~~~~~ 122 (403)
T TIGR00836 105 IAATIISGAVAERMKFSA 122 (403)
T ss_pred HHHHHHHHHHhhcccHHH
Confidence 334455666777655443
No 328
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=39.37 E-value=3.4e+02 Score=25.69 Aligned_cols=9 Identities=0% Similarity=0.379 Sum_probs=5.0
Q ss_pred HHHhhhccc
Q 014628 261 FILDQMGAT 269 (421)
Q Consensus 261 ~l~d~~~~~ 269 (421)
.+.+|++++
T Consensus 106 ~l~k~l~~~ 114 (465)
T PF03606_consen 106 LLIKPLKGK 114 (465)
T ss_pred HHHHHhcCC
Confidence 344666555
No 329
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=38.89 E-value=3.2e+02 Score=25.26 Aligned_cols=18 Identities=11% Similarity=0.113 Sum_probs=9.8
Q ss_pred hhHHHhHHhhhhcchhHH
Q 014628 94 ALGYVYGGVVGSHLNWRY 111 (421)
Q Consensus 94 ~~g~~~~~~l~~~~~wr~ 111 (421)
....++.|.+.+....+.
T Consensus 112 ~a~~IvsGavaeR~~~~~ 129 (404)
T TIGR03644 112 TAMSIVSGAVAERMKLWP 129 (404)
T ss_pred HHHHHHHhHhhhcccHHH
Confidence 334455666777655443
No 330
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=37.71 E-value=1.3e+02 Score=27.76 Aligned_cols=34 Identities=12% Similarity=0.130 Sum_probs=13.6
Q ss_pred HHhhhhhHHHhhhccccchhhHHHHHHHHHHHHHH
Q 014628 254 VGTISGGFILDQMGATISNAFKLLSAATFLGAISC 288 (421)
Q Consensus 254 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
+....+|-+-.|.|.|+.- +.+++...++....+
T Consensus 342 i~GY~~gs~Y~r~gG~~Wi-k~m~lta~Lfp~~~~ 375 (593)
T KOG1277|consen 342 INGYVSGSFYARLGGRRWI-KNMLLTASLFPVPVF 375 (593)
T ss_pred ccccccceeeehhccHHHH-HHHHHHhhhhhHHHH
Confidence 3333344444455544221 133344444444333
No 331
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=35.13 E-value=47 Score=23.51 Aligned_cols=38 Identities=21% Similarity=0.163 Sum_probs=28.6
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 41 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~ 41 (421)
+++.++.+++..|+.-+.+.=.+|..+..++..+..+.
T Consensus 67 fI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 67 FIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred HHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 45778899999999888887777777777776665444
No 332
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.02 E-value=92 Score=21.38 Aligned_cols=16 Identities=19% Similarity=0.416 Sum_probs=9.3
Q ss_pred cccCcchhHHHhhhccc
Q 014628 346 GDVPSSPLVGVLQDHVN 362 (421)
Q Consensus 346 g~~~~~~~~g~l~~~~g 362 (421)
++++|- +.|+..+.++
T Consensus 35 ~aiVg~-i~Gf~~Qqls 50 (101)
T KOG4112|consen 35 GAIVGF-IYGFAQQQLS 50 (101)
T ss_pred HHHHHH-HHHHHHHHHH
Confidence 545543 6677777554
No 333
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=34.51 E-value=76 Score=23.19 Aligned_cols=19 Identities=21% Similarity=0.436 Sum_probs=8.8
Q ss_pred chhhhHHHHHHHHHHHHHH
Q 014628 364 WRKTTLALTSIFFLAAGIW 382 (421)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~ 382 (421)
|.+..+..+++.++..+++
T Consensus 35 WNysiL~Ls~vvlvi~~~L 53 (125)
T PF15048_consen 35 WNYSILALSFVVLVISFFL 53 (125)
T ss_pred cchHHHHHHHHHHHHHHHH
Confidence 5555555544443333333
No 334
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=33.75 E-value=76 Score=24.30 Aligned_cols=21 Identities=29% Similarity=0.347 Sum_probs=17.0
Q ss_pred ccccchhhHHHHhhhhcCCch
Q 014628 2 VGLLVASPIFASLAKSHNPFR 22 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Grr~ 22 (421)
+|+.+.+.+.|++.+|..+++
T Consensus 64 ~gf~~~a~i~g~~~~~~~~~~ 84 (148)
T PF02632_consen 64 LGFPLAALIIGLLAERLKRSR 84 (148)
T ss_pred HHHHHHHHHHHHHHHhccccc
Confidence 567788888999999988764
No 335
>COG4769 Predicted membrane protein [Function unknown]
Probab=33.06 E-value=31 Score=26.58 Aligned_cols=47 Identities=15% Similarity=0.186 Sum_probs=32.3
Q ss_pred chhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHhhhhh
Q 014628 6 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 58 (421)
Q Consensus 6 i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 58 (421)
+.+...-++..++|+|..-.++. +...++.+|..++.+.+++.|-..
T Consensus 88 i~S~L~m~~l~~f~~k~~S~lgi------S~mGaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 88 ILSTLFMYFLYQFGPKYLSLLGI------SVMGAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHcCCceEeeeeh------hhHHHHHHhHHHHHHHHHHHhcch
Confidence 33445566778888888744443 234467899999999999987433
No 336
>PRK02237 hypothetical protein; Provisional
Probab=32.37 E-value=64 Score=22.96 Aligned_cols=38 Identities=13% Similarity=0.078 Sum_probs=26.7
Q ss_pred ccchhhHHHHhhhhcCCchHHHHHHHHHHHHHhhhhhh
Q 014628 4 LLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 41 (421)
Q Consensus 4 ~~i~~~~~g~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~ 41 (421)
+++.++.+++..|+.-+-+.=.+|..+..++..+..+.
T Consensus 69 yI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 69 YVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred HHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 45678888888888877777667766666666554443
No 337
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=32.21 E-value=40 Score=27.81 Aligned_cols=54 Identities=17% Similarity=0.097 Sum_probs=37.9
Q ss_pred HHHHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHh
Q 014628 48 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 102 (421)
Q Consensus 48 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~ 102 (421)
...-.-.|+|++....++..-+.+.+|+ ......++-.+.+.+..+.|-...-+
T Consensus 175 ~ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~if 228 (241)
T PF11299_consen 175 YALAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIF 228 (241)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456678999999999999999999974 46666666666666555555544433
No 338
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=32.05 E-value=84 Score=25.11 Aligned_cols=19 Identities=21% Similarity=0.434 Sum_probs=16.5
Q ss_pred ccccchhhHHHHhhhhcCC
Q 014628 2 VGLLVASPIFASLAKSHNP 20 (421)
Q Consensus 2 lg~~i~~~~~g~l~Dr~Gr 20 (421)
+|+.+++.+.|++.||..+
T Consensus 93 ~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 93 IGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred HHHHHHHHHHHHHHHhhhc
Confidence 5778889999999999885
No 339
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=31.24 E-value=88 Score=21.32 Aligned_cols=42 Identities=14% Similarity=0.029 Sum_probs=31.7
Q ss_pred cccchhhHHHHhhhhcCC-------chHHHHHHHHHHHHHhhhhhhhhH
Q 014628 3 GLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFDF 44 (421)
Q Consensus 3 g~~i~~~~~g~l~Dr~Gr-------r~~~~~~~~~~~~~~~~~~~~~~~ 44 (421)
+...+.+.++++.+|.-+ ++.+..+.++...+.++++..+|.
T Consensus 30 ~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 30 GATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 345667888888888765 778888888888888888776553
No 340
>TIGR02230 ATPase_gene1 F0F1-ATPase subunit, putative. This model represents a protein found encoded in F1F0-ATPase operons in several genomes, including Methanosarcina barkeri (archaeal) and Chlorobium tepidum (bacterial). It is a small protein (about 100 amino acids) with long hydrophic stretches and is presumed to be a subunit of the enzyme.
Probab=28.37 E-value=2.2e+02 Score=20.14 Aligned_cols=36 Identities=14% Similarity=0.263 Sum_probs=18.8
Q ss_pred HHHHHHHHHhhhHHHhHHhhhhcch----hHHHHHHHHHH
Q 014628 84 MFYMCIPTGVALGYVYGGVVGSHLN----WRYAFWGEAIL 119 (421)
Q Consensus 84 ~~~~~~~~G~~~g~~~~~~l~~~~~----wr~~f~~~~~~ 119 (421)
.......+..++|..+|-++-.+++ |-.+|++.++.
T Consensus 47 ~IG~~~v~pil~G~~lG~WLD~~~~t~~~~tl~~lllGv~ 86 (100)
T TIGR02230 47 LIGWSVAIPTLLGVAVGIWLDRHYPSPFSWTLTMLIVGVV 86 (100)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcHHHHHHHHHHHH
Confidence 3334444445555556666655554 55555555543
No 341
>PRK11588 hypothetical protein; Provisional
Probab=27.25 E-value=5.6e+02 Score=24.55 Aligned_cols=142 Identities=11% Similarity=-0.016 Sum_probs=0.0
Q ss_pred hHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhcccCCchhhHHHHHHH
Q 014628 260 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 339 (421)
Q Consensus 260 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 339 (421)
+++.+|++.| ..+++..+.....+......-..........+...+.... -+...+.+.....
T Consensus 137 ~~l~~k~~~~-----~~llIpil~~lFsl~G~~~G~~Ee~i~f~pi~v~l~~alG------------yD~ivg~ai~~lg 199 (506)
T PRK11588 137 LALIRKTRGN-----EILFIPVLFILFSLGGAVFGMGEEAIAFAIIIAPLMVRLG------------YDSITTVLVTYVA 199 (506)
T ss_pred HHHHHHhCCC-----cEEeHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhC------------CcHHHHHHHHHHH
Q ss_pred HHHHhhcccCcchhHHHhhhccc---cchhhhHHHHHHHHHHHHHHHHhhhhccccccccccccccccCccccccccccc
Q 014628 340 VSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIFFLAAGIWFVGIFLKSIDKFNEDGENQISLDSKANMKPLLEG 416 (421)
Q Consensus 340 ~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (421)
...+..++.+.|+-.|.-.+..| .-...+=....+........+..++.++-++.+++.-....+++.+++....++
T Consensus 200 ~~iGf~~s~~NPftvgIAQ~iAglp~~SG~~~R~i~~~v~~~i~i~yv~~YA~kVkkdP~kS~~~~~~~~~~~~~~~~~~ 279 (506)
T PRK11588 200 TQIGFATSWMNPFSVAIAQGIAGVPVLSGSGLRIVMWVIFTLIGLIFTMVYASRVKKNPLLSRVHESDRFFREKQADVEQ 279 (506)
T ss_pred hhhhhcccccCccHHHHHHHhcCCCccccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcccccccchhhhhhhhccccc
Q ss_pred CC
Q 014628 417 NG 418 (421)
Q Consensus 417 ~~ 418 (421)
.+
T Consensus 280 ~~ 281 (506)
T PRK11588 280 RP 281 (506)
T ss_pred cC
No 342
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=27.23 E-value=21 Score=30.19 Aligned_cols=19 Identities=21% Similarity=0.217 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 014628 113 FWGEAILMLPFAVLAFVIK 131 (421)
Q Consensus 113 f~~~~~~~~~~~~~~~~~~ 131 (421)
++..+.+.++++++.|++.
T Consensus 24 ~l~~~~llll~ail~w~~i 42 (381)
T PF05297_consen 24 SLLFGLLLLLVAILVWFFI 42 (381)
T ss_dssp -------------------
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 4444444455555555554
No 343
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=26.67 E-value=1.4e+02 Score=17.54 Aligned_cols=36 Identities=14% Similarity=0.111 Sum_probs=15.8
Q ss_pred HhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHH
Q 014628 92 GVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 127 (421)
Q Consensus 92 G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~ 127 (421)
|..+|..+.+.+-...++.+.-++.++++.+..+..
T Consensus 7 Ga~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i 42 (48)
T PF04226_consen 7 GAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFI 42 (48)
T ss_pred HHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHH
Confidence 344444443333322234555555555554444433
No 344
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=26.45 E-value=4.8e+02 Score=23.50 Aligned_cols=109 Identities=9% Similarity=-0.001 Sum_probs=51.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCccchhHHHhhhhHHHHHHhhhhhHHHhhhccccchhhHHHHHHHHH
Q 014628 204 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 283 (421)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 283 (421)
++++......++.+..+.+........-. .....+. ....+.-+...++.+.+.+++|-| ..+......
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~---~lg~~sl---~~~y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~ 97 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNY---DLGTVSL---GALYLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFP 97 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhc---Ccccchh---hhhhHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHH
Confidence 44555555555555555555443332222 1221111 122344455666667889999987 555444433
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHHHhccCchhhhhhc
Q 014628 284 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLH 324 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (421)
....... -..+.....+......|++.+..+..--+++.+
T Consensus 98 Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~ 137 (390)
T KOG3097|consen 98 YALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTP 137 (390)
T ss_pred HHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecH
Confidence 3322221 122333444445555566665555554444443
No 345
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=26.30 E-value=3.3e+02 Score=22.06 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=23.9
Q ss_pred CCCchhHHHHHHHHHHHHhhhHHHhHHhhhh
Q 014628 75 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 105 (421)
Q Consensus 75 ~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~ 105 (421)
.++.+++..+--.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4556888888888888888888888877654
No 346
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=26.15 E-value=5e+02 Score=23.58 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=12.8
Q ss_pred hhhhHHhhcchhHHHHHHHHH
Q 014628 194 SQDTKVLLQEKVYVVNVLGYI 214 (421)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~ 214 (421)
.+..+..+++|..+...++..
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli 255 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLI 255 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHH
Confidence 344556677787776666543
No 347
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=26.05 E-value=38 Score=25.24 Aligned_cols=20 Identities=15% Similarity=0.423 Sum_probs=9.6
Q ss_pred HHHHHHHHHHHHHHHHHHHh
Q 014628 110 RYAFWGEAILMLPFAVLAFV 129 (421)
Q Consensus 110 r~~f~~~~~~~~~~~~~~~~ 129 (421)
||++++..++.+++.++.+.
T Consensus 1 RW~l~~iii~~i~l~~~~~~ 20 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFLFLFY 20 (130)
T ss_pred CeeeHHHHHHHHHHHHHHHH
Confidence 45665555444444443333
No 348
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=25.66 E-value=12 Score=31.55 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=26.4
Q ss_pred hHHhhcchhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhCCcc
Q 014628 197 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 239 (421)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (421)
+...+++-.+.-..+.+.+.-...+.-..|+|.|..+..+++.
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~q 236 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQ 236 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHH
Confidence 3344555666666666666656666666677777666666554
No 349
>PF11298 DUF3099: Protein of unknown function (DUF3099); InterPro: IPR021449 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=25.46 E-value=1.4e+02 Score=19.60 Aligned_cols=32 Identities=3% Similarity=-0.099 Sum_probs=24.9
Q ss_pred HhhhhcCCchHHHHHHHHHHHHHhhhhhhhhH
Q 014628 13 SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF 44 (421)
Q Consensus 13 ~l~Dr~Grr~~~~~~~~~~~~~~~~~~~~~~~ 44 (421)
+--|+-.|++-+.+.+.+-..+.++..+....
T Consensus 9 ~~~d~~~R~r~Y~i~M~~Ri~~fvlA~~~~~~ 40 (73)
T PF11298_consen 9 LSQDQRRRRRRYLIMMGIRIPCFVLAAVVYRL 40 (73)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 34577788899999998888888887777655
No 350
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=24.57 E-value=2.2e+02 Score=18.86 Aligned_cols=51 Identities=10% Similarity=0.177 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 014628 81 WLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 81 ~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 137 (421)
+--+.+....++.+++-+.| ++.+ +.+..+++.++-.+ +..+...|+.+..
T Consensus 9 ae~l~~~il~~~~iisfi~G-y~~q--~~~~~~~~~~~g~~---~~~lv~vP~Wp~y 59 (76)
T PF06645_consen 9 AEKLMQYILIISAIISFIVG-YITQ--SFSYTFYIYGAGVV---LTLLVVVPPWPFY 59 (76)
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHH--HHHHHHHHHHHHHH---HHHhheeCCcHhh
Confidence 33444555555555555444 4444 25666666654332 3333445776654
No 351
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=23.79 E-value=6.3e+02 Score=23.94 Aligned_cols=31 Identities=10% Similarity=-0.164 Sum_probs=22.0
Q ss_pred CCchHHHHHHHHHHHHHhhhhhhhhHHHHHH
Q 014628 19 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 49 (421)
Q Consensus 19 Grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 49 (421)
|.|+...-..+.+.++++.-++.+++....+
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl 369 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFV 369 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 4455566666777788889888888776553
No 352
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=23.42 E-value=1.1e+02 Score=19.86 Aligned_cols=24 Identities=29% Similarity=0.539 Sum_probs=11.3
Q ss_pred HHHHHHHHHHHHHhhhhccccccc
Q 014628 372 TSIFFLAAGIWFVGIFLKSIDKFN 395 (421)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~ 395 (421)
.........++..++..++++|+.
T Consensus 17 ~i~V~~~~~~wi~~Ra~~~~DKT~ 40 (72)
T PF13268_consen 17 SILVLLVSGIWILWRALRKKDKTA 40 (72)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcH
Confidence 333334444555555445555543
No 353
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=22.35 E-value=4.1e+02 Score=21.26 Aligned_cols=57 Identities=9% Similarity=-0.076 Sum_probs=32.2
Q ss_pred hccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhHHhhhhcchhHHHHHHHHHH
Q 014628 61 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAIL 119 (421)
Q Consensus 61 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~~~l~~~~~wr~~f~~~~~~ 119 (421)
-.....+++.+..|+++|.++.-+-..+..+--.+.-..+.++.+. |++..++.|+.
T Consensus 13 DN~~vi~~~~~~lp~~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 13 DNAFVIAMIFRKLPPEQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred hHHHHHHHHHhCCCHHHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 3445567777788887776655443333333334444455666654 46666666643
No 354
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=21.95 E-value=4.3e+02 Score=21.33 Aligned_cols=29 Identities=3% Similarity=0.048 Sum_probs=19.6
Q ss_pred hhHHHhhhhHHHHHHhhhhhHHHhhhccc
Q 014628 241 DMMFGGVTIVCGIVGTISGGFILDQMGAT 269 (421)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 269 (421)
...+.....++.++..+..+....+.+++
T Consensus 152 G~l~m~~FgLGT~p~ll~~~~~~~~l~~~ 180 (199)
T PF13386_consen 152 GALLMLAFGLGTLPALLLAGLLAGKLSRR 180 (199)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 33455667777777777777777776655
No 355
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=21.87 E-value=2.3e+02 Score=18.16 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=14.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcccccccc
Q 014628 108 NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 137 (421)
Q Consensus 108 ~wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 137 (421)
||-.++.+...+.++..-..=..+||..+.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 455555555444444433334445775443
No 356
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=21.43 E-value=2.6e+02 Score=25.83 Aligned_cols=51 Identities=8% Similarity=0.078 Sum_probs=32.1
Q ss_pred HHHHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhH
Q 014628 50 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 100 (421)
Q Consensus 50 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 100 (421)
.-++.|+..+........++.+..+-++---+..+...+..+|.+..++++
T Consensus 281 ~A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 281 GAIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 344555555555444555556666555555678888888888877777665
No 357
>PF13940 Ldr_toxin: Toxin Ldr, type I toxin-antitoxin system
Probab=21.31 E-value=1.3e+02 Score=16.07 Aligned_cols=20 Identities=20% Similarity=0.604 Sum_probs=12.3
Q ss_pred hhhhHHHHHHhhhhhHHHhh
Q 014628 246 GVTIVCGIVGTISGGFILDQ 265 (421)
Q Consensus 246 ~~~~~~~~~~~~~~g~l~d~ 265 (421)
+.+.+.+++.+++.+|+-+|
T Consensus 15 AAP~iagIi~s~iv~w~~~R 34 (35)
T PF13940_consen 15 AAPIIAGIIASLIVGWLRNR 34 (35)
T ss_pred HhHHHHHHHHHHHHHHHHhc
Confidence 34556666667777776544
No 358
>PRK14229 camphor resistance protein CrcB; Provisional
Probab=21.06 E-value=3.2e+02 Score=19.56 Aligned_cols=46 Identities=7% Similarity=-0.029 Sum_probs=22.9
Q ss_pred HHHHHHHhhhhhhhhHHHHHHHHHHhhhhhhhhccchhhhhhccCC
Q 014628 29 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 74 (421)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~ 74 (421)
++..+++++.++......---.|.+.+.|..+....-.++..|...
T Consensus 34 ~vNi~G~fllG~~~~~~~~~~~~~~l~tGf~GgfTTFSTf~~e~~~ 79 (108)
T PRK14229 34 IANLLGCFLIGVFYNHVESKEVYAILATGFCGGLTTFSTLNDELQR 79 (108)
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHhhHccccccHHHHHHHHHH
Confidence 3445555554443221100113444555555666677777777664
No 359
>PF04341 DUF485: Protein of unknown function, DUF485; InterPro: IPR007436 This family includes several putative integral membrane proteins.
Probab=20.92 E-value=2.9e+02 Score=18.98 Aligned_cols=34 Identities=9% Similarity=-0.016 Sum_probs=21.9
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhC
Q 014628 203 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH 236 (421)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (421)
++..+.+....+..++++.....+.|..+.....
T Consensus 15 ~r~~~~l~~i~l~~y~~~~ll~a~~p~~m~~~v~ 48 (91)
T PF04341_consen 15 RRLAWPLSAIFLVLYFGFVLLSAFAPELMATPVF 48 (91)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCHHHHcCccc
Confidence 3444555555666677777777888887765544
No 360
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=20.88 E-value=8.8e+02 Score=24.56 Aligned_cols=52 Identities=10% Similarity=0.036 Sum_probs=24.5
Q ss_pred hHHHhhhccccchhhHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 014628 260 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 311 (421)
Q Consensus 260 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (421)
+-++|.=++.+.+.+.+++....+....+......+.++.+...+.+..++.
T Consensus 44 ~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 44 AALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 4466665554333333443333333344444444555665555555544444
No 361
>PTZ00370 STEVOR; Provisional
Probab=20.71 E-value=4.6e+02 Score=22.73 Aligned_cols=23 Identities=9% Similarity=0.054 Sum_probs=10.6
Q ss_pred hHHHhhhccccchhhhHHHHHHH
Q 014628 353 LVGVLQDHVNNWRKTTLALTSIF 375 (421)
Q Consensus 353 ~~g~l~~~~g~~~~~~~~~~~~~ 375 (421)
..+.....+..|..+.++..++.
T Consensus 246 AAtaAsaaF~Pygiaalvllil~ 268 (296)
T PTZ00370 246 AASAASSAFYPYGIAALVLLILA 268 (296)
T ss_pred HHHHHHHhhcccHHHHHHHHHHH
Confidence 34444444554545444444333
No 362
>COG1288 Predicted membrane protein [Function unknown]
Probab=20.45 E-value=2.5e+02 Score=26.04 Aligned_cols=21 Identities=33% Similarity=0.352 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q 014628 110 RYAFWGEAILMLPFAVLAFVI 130 (421)
Q Consensus 110 r~~f~~~~~~~~~~~~~~~~~ 130 (421)
...|.+.-++.++.+++.|+.
T Consensus 13 P~~ftILf~ii~~~ailTwvi 33 (481)
T COG1288 13 PSAFTILFIIIILAAILTWVI 33 (481)
T ss_pred CcHHHHHHHHHHHHHHHheee
Confidence 345555555556666666665
No 363
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=20.18 E-value=4e+02 Score=24.62 Aligned_cols=48 Identities=10% Similarity=0.118 Sum_probs=28.2
Q ss_pred HHhhhhhhhhccchhhhhhccCCCCCchhHHHHHHHHHHHHhhhHHHhH
Q 014628 52 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 100 (421)
Q Consensus 52 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~~~ 100 (421)
++.|+-.+........++ |..+-++---+..+...+...|.+..+++.
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344444444444444444 445555555678888777777777766665
No 364
>PF14851 FAM176: FAM176 family
Probab=20.07 E-value=2.9e+02 Score=21.36 Aligned_cols=7 Identities=14% Similarity=0.363 Sum_probs=3.3
Q ss_pred HHHhhhc
Q 014628 354 VGVLQDH 360 (421)
Q Consensus 354 ~g~l~~~ 360 (421)
+.++.++
T Consensus 12 ya~I~~~ 18 (153)
T PF14851_consen 12 YAHIRDN 18 (153)
T ss_pred HHHHHhC
Confidence 3455554
Done!