BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014631
(421 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3PDX|A Chain A, Crystal Structural Of Mouse Tyrosine Aminotransferase
Length = 402
Score = 283 bits (723), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 217/385 (56%), Gaps = 13/385 (3%)
Query: 38 LKENDPRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIAD 97
+K N + +I L GDP+ F T P S +++ Y+PS+G L +R +A
Sbjct: 25 VKPNPNKTVISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGYLSSREEVAS 84
Query: 98 YLNS-ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
Y + E P L DV LT+GC QAI++ L VLA PG NIL+P+PGF LY A +E
Sbjct: 85 YYHCPEAP--LEAKDVILTSGCSQAIELCLAVLANPGQNILIPRPGFSLYRTLAESMGIE 142
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
++ ++LLPEK WE+DL LE+L DE T +V+ NP NPCG+VF+ + LQKI A + +
Sbjct: 143 VKLYNLLPEKSWEIDLKQLESLIDEKTACLVVNNPSNPCGSVFSKRHLQKILAVAERQCV 202
Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL- 275
+++DE+Y + F Y M + VP+++ G ++ RW+VPGWRLGW++ D I
Sbjct: 203 PILADEIYGDMVFSDCKYEPMATLSTNVPILSCGGLAXRWLVPGWRLGWILIHDRRDIFG 262
Query: 276 QELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
E+R G + +S GP T VQGA+ I + T ++F+ + L+ AD+CY +
Sbjct: 263 NEIR-----DGLVKLSQRILGPCTIVQGALKSILQRTPQEFYQDTLSFLKSNADLCYGAL 317
Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392
IP + P +P G+M++MV + + +D+EF +L E+SV LP N+
Sbjct: 318 SAIPGLQ-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLIAEQSVHCLPATCFEYPNFF 376
Query: 393 RITFAIEPSALEEGLGRIKAFCQRH 417
R+ + + E RI+ FC++H
Sbjct: 377 RVVITVPEVMMLEACSRIQEFCEQH 401
>pdb|3DYD|A Chain A, Human Tyrosine Aminotransferase
pdb|3DYD|B Chain B, Human Tyrosine Aminotransferase
Length = 427
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 142/385 (36%), Positives = 216/385 (56%), Gaps = 13/385 (3%)
Query: 38 LKENDPRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIAD 97
+K N + +I L GDP+ F T P S +++ Y+PS+G L +R IA
Sbjct: 48 VKPNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGFLSSREEIAS 107
Query: 98 YLNS-ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
Y + E P L DV LT+GC QAI + L VLA PG NIL+P+PGF LY+ A +E
Sbjct: 108 YYHCPEAP--LEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIE 165
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
++ ++LLPEK WE+DL LE L DE T +++ NP NPCG+VF+ + LQKI A + +
Sbjct: 166 VKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCV 225
Query: 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL- 275
+++DE+Y + F Y + + VP+++ G ++KRW+VPGWRLGW++ D I
Sbjct: 226 PILADEIYGDMVFSDCKYEPLATLSTDVPILSCGGLAKRWLVPGWRLGWILIHDRRDIFG 285
Query: 276 QELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
E+R G + +S GP T VQGA+ I T +F+ + L+ AD+CY +
Sbjct: 286 NEIR-----DGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLCYGAL 340
Query: 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392
IP + P +P G+M++MV + + +D+EF +L E+SV LP N++
Sbjct: 341 AAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFI 399
Query: 393 RITFAIEPSALEEGLGRIKAFCQRH 417
R+ + + E RI+ FC++H
Sbjct: 400 RVVITVPEVMMLEACSRIQEFCEQH 424
>pdb|1BW0|A Chain A, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
pdb|1BW0|B Chain B, Crystal Structure Of Tyrosine Aminotransferase From
Trypanosoma Cruzi
Length = 416
Score = 206 bits (524), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 129/387 (33%), Positives = 198/387 (51%), Gaps = 15/387 (3%)
Query: 43 PRPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNS- 101
P+PII L GDP+ T+ S E + Y P+VG AR A+A + +
Sbjct: 32 PKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSPEAREAVATWWRNS 91
Query: 102 -----ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE 156
EL + D+V L +G I + +T + G L+P+PGFP YE + +
Sbjct: 92 FVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIG 151
Query: 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216
+ ++ PE WE DLD + L D+ T +++ NP NPCG+ F+ + ++ I A +L +
Sbjct: 152 MHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRL 211
Query: 217 MVISDEVYDHLTF-GSTP---YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272
+ SDE+Y + F G P + + F +TVP + LG + +VPGWRLGWL+ DP
Sbjct: 212 PLFSDEIYAGMVFKGKDPNATFTSVADFETTVPRVILGGTAXNLVVPGWRLGWLLYVDPH 271
Query: 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332
G ++ +K + GP T VQ A+ + NT ++ +IV + ++A Y+ I
Sbjct: 272 G--NGPSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVAKIEESAMYLYNHI 329
Query: 333 KEIPCI-TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391
E CI P P G+M++M +++L I D+EF +L +EE+V VLPG +
Sbjct: 330 GE--CIGLAPTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGF 387
Query: 392 LRITFAIEPSALEEGLGRIKAFCQRHA 418
R+T E + RIKAFCQRHA
Sbjct: 388 TRLTTTRPVEVYREAVERIKAFCQRHA 414
>pdb|1XI9|A Chain A, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|B Chain B, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|C Chain C, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
pdb|1XI9|D Chain D, Alanine Aminotransferase From Pyrococcus Furiosus
Pfu-1397077-001
Length = 406
Score = 151 bits (381), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 105/377 (27%), Positives = 172/377 (45%), Gaps = 12/377 (3%)
Query: 46 IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
+I L GDP F P + Y S G+ R+AI + +
Sbjct: 40 VIRLNIGDPVKFDF--QPPEHMKEAYCKAIKEGHNYYGDSEGLPELRKAIVEREKRKNGV 97
Query: 106 KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
++PDDV +TA +A+Q+I L PG IL+P P +P Y + + + + E
Sbjct: 98 DITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEE 157
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
+ W+ D+D + + T A+ ++NP NP G ++ + L++I A + I VISDE+YD
Sbjct: 158 EDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYD 217
Query: 226 HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
+T+ ++ G VPVI + +SK + GWRLG++ DP L E+R ++I
Sbjct: 218 LMTYEGE-HISPGSLTKDVPVIVMNGLSKVYFATGWRLGYMYFVDPENKLSEVR--EAID 274
Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
I P T Q A D+ + + L++ D Y R+ EIP I+ KP+
Sbjct: 275 RLARIRLCPNTPAQFAAIAGLTGPM-DYLKEYMKKLKERRDYIYKRLNEIPGIST-TKPQ 332
Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSAL 403
G+ ++ K+ + + +D EF L + V+ + G G R F L
Sbjct: 333 GAFYIFPKIEVGPWK---NDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEIL 389
Query: 404 EEGLGRIKAFCQRHAKQ 420
EE + R + F + K+
Sbjct: 390 EEAMDRFEKFMKERLKE 406
>pdb|1GDE|A Chain A, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GDE|B Chain B, Crystal Structure Of Pyrococcus Protein A-1 E-form
pdb|1GD9|A Chain A, Crystall Structure Of Pyrococcus Protein-A1
pdb|1GD9|B Chain B, Crystall Structure Of Pyrococcus Protein-A1
Length = 389
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 44 RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
+ +I LG G+P TP Y P++G+L R AIA+ L +
Sbjct: 26 KDVISLGIGEPDF-----DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 80
Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRH 159
+ P ++ + G QA + L+ + G +L+P P F Y A +E+
Sbjct: 81 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 140
Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
++ E + +++D L+ + T A++I +P NP G V T + L++IA+ + ++VI
Sbjct: 141 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 197
Query: 220 SDEVYDHLTFGSTPYVRM----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
SDEVY+H + + + G+F T IT+ SK + + GWRLG++ PS I+
Sbjct: 198 SDEVYEHFIYDDARHYSIASLDGMFERT---ITVNGFSKTFAMTGWRLGFVAA--PSWII 252
Query: 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD----ICYDR 331
+ + +K + ++ P TF+Q A + K+ + K V+ +R D + + R
Sbjct: 253 ERM-----VKFQMYNATCPVTFIQYAAAKALKDERS---WKAVEEMRKEYDRRRKLVWKR 304
Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--K 389
+ E+ T KP+G+ ++ ++ + L +F+ + KE V V+PG A G +
Sbjct: 305 LNEMGLPTV--KPKGAFYIFPRIRDTGLTS----KKFSELMLKEARVAVVPGSAFGKAGE 358
Query: 390 NWLRITFAIEPSALEEGLGRIK 411
++RI++A LEE + R++
Sbjct: 359 GYVRISYATAYEKLEEAMDRME 380
>pdb|1DJU|A Chain A, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
pdb|1DJU|B Chain B, Crystal Structure Of Aromatic Aminotransferase From
Pyrococcus Horikoshii Ot3
Length = 388
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/382 (26%), Positives = 184/382 (48%), Gaps = 41/382 (10%)
Query: 44 RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
+ +I LG G+P TP Y P++G+L R AIA+ L +
Sbjct: 25 KDVISLGIGEPDF-----DTPQHIKEYAKEALDKGLTHYGPNIGLLELREAIAEKLKKQN 79
Query: 104 PCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRH 159
+ P ++ + G QA + L+ + G +L+P P F Y A +E+
Sbjct: 80 GIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPT 139
Query: 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219
++ E + +++D L+ + T A++I +P NP G V T + L++IA+ + ++VI
Sbjct: 140 YE---EDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVI 196
Query: 220 SDEVYDHLTFGSTPYVRM----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275
SDEVY+H + + + G+F T IT+ SK + + GWRLG++ PS I+
Sbjct: 197 SDEVYEHFIYDDARHYSIASLDGMFERT---ITVNGFSKTFAMTGWRLGFVAA--PSWII 251
Query: 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD----ICYDR 331
+ + +K + ++ P TF+Q A + K+ + K V+ +R D + + R
Sbjct: 252 ERM-----VKFQMYNATCPVTFIQYAAAKALKDERS---WKAVEEMRKEYDRRRKLVWKR 303
Query: 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--K 389
+ E+ T KP+G+ ++ ++ + L +F+ + KE V V+PG A G +
Sbjct: 304 LNEMGLPTV--KPKGAFYIFPRIRDTGLTS----KKFSELMLKEARVAVVPGSAFGKAGE 357
Query: 390 NWLRITFAIEPSALEEGLGRIK 411
++RI++A LEE + R++
Sbjct: 358 GYVRISYATAYEKLEEAMERME 379
>pdb|1V2D|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
pdb|1V2E|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2E|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With A-Keto-G-Methylthiobutyrate
pdb|1V2F|A Chain A, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
pdb|1V2F|B Chain B, Crystal Structure Of T.Th Hb8 Glutamine Aminotransferase
Complex With 3-Phenylpropionate
Length = 381
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 159/346 (45%), Gaps = 48/346 (13%)
Query: 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139
D Y+P G+ R A+A+ E P+ V +T+G +A+ V+L L PG +++
Sbjct: 55 DQYAPPAGLPALREALAEEFAVE------PESVVVTSGATEALYVLLQSLVGPGDEVVVL 108
Query: 140 KPGFPLY-------EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
+P F +Y A AR RL DL PE G+ +DL LE T A+++ P
Sbjct: 109 EPFFDVYLPDAFLAGAKARLVRL-----DLTPE-GFRLDLSALEKALTPRTRALLLNTPM 162
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G VF ++L+ IA AR + +ISDEVYD L +G P R+ F T+GS
Sbjct: 163 NPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPR-RLREFAPER-TFTVGSA 220
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK-NTKE 311
KR G+R+GW+V P + L ++ + + S+ T +Q V + K +E
Sbjct: 221 GKRLEATGYRVGWIV--GPKEFMPRL---AGMRQWTSFSA--PTPLQAGVAEALKLARRE 273
Query: 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQ 371
F+ + + R D+ ++ + PEG+ F+M +L G A +
Sbjct: 274 GFYEALREGYRRRRDLLAGGLRAMGLRVY--VPEGTYFLMAELP-----GWD-----AFR 321
Query: 372 LAKEESVIVLPGMAVGM----KNWLRITFAIEPSALE---EGLGRI 410
L +E V ++P A + K+ R F L E LGR+
Sbjct: 322 LVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERLGRV 367
>pdb|1O4S|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
pdb|1O4S|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1255)
From Thermotoga Maritima At 1.90 A Resolution
Length = 389
Score = 105 bits (261), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 149/334 (44%), Gaps = 20/334 (5%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+ GI R IA + +SPD V +T G KQA+ L PG +++ P
Sbjct: 74 YTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSP 133
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y + + K ++ L+ +E L T A++I +P NP G V+
Sbjct: 134 VWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRR 193
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261
+ L+ + A+K +ISDEVYD L + + V ++ + SK + GW
Sbjct: 194 EFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTSILDVSEGFDRIVYINGFSKSHSMTGW 253
Query: 262 RLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321
R+G+L++S+ V I+ + +S T Q A + + S +V
Sbjct: 254 RVGYLISSEKVATA-----VSKIQSH--TTSCINTVAQYAALKALEVDN----SYMVQTF 302
Query: 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381
++ + +R+K++ +PEG+ ++ K+ DD++F +L +E+ V ++
Sbjct: 303 KERKNFVVERLKKMGVKFV--EPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALV 353
Query: 382 PGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415
PG A ++R++FA L E L RI+ F
Sbjct: 354 PGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387
>pdb|1J32|A Chain A, Aspartate Aminotransferase From Phormidium Lapideum
pdb|1J32|B Chain B, Aspartate Aminotransferase From Phormidium Lapideum
Length = 388
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 154/334 (46%), Gaps = 15/334 (4%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y P+ G R AIA L + D++ +T G KQ+I ++ + PG +++P P
Sbjct: 63 YGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAP 122
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y + E ++V + + T +V P NP G V+T
Sbjct: 123 FWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTP 182
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV--PVITLGSMSKRWIVP 259
+++ IA+ A + G+ V+SDE+Y+ + + ++ +G + +K + +
Sbjct: 183 DEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKTYAMT 242
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319
GWR+G+L +G + ++ I+G+ +S TF Q ++N+ +D +++
Sbjct: 243 GWRVGFL-----AGPVPLVKAATKIQGH--STSNVCTFAQYGAIAAYENS-QDCVQEMLA 294
Query: 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379
+ D + +P + CP KP+G+ ++ S+ + ++F +L + V
Sbjct: 295 AFAERRRYMLDALNAMPGLECP-KPDGAFYMFP----SIAKTGRSSLDFCSELLDQHQVA 349
Query: 380 VLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413
+PG A G + +R+++A + ++ G+ R++ F
Sbjct: 350 TVPGAAFGADDCIRLSYATDLDTIKRGMERLEKF 383
>pdb|2Z61|A Chain A, Crystal Structure Of Mj0684 From Methanococcus Jannaschii
Reveals Its Similarity In The Active Site To Kynurenine
Aminotransferases
Length = 370
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 147/338 (43%), Gaps = 32/338 (9%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+ S GIL R I++ + + PD++ +T G + L+ + G +L+ P
Sbjct: 62 YTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNP 121
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+P Y+ R + D E LE + T A++I +P NP G V
Sbjct: 122 CYPCYKNFIRFLGAKPVFCDFTVE--------SLEEALSDKTKAIIINSPSNPLGEVID- 172
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261
++I E A + +ISDE+Y+ L + Y + + I + S + + GW
Sbjct: 173 ---REIYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLEKTILINGFSXLYAMTGW 229
Query: 262 RLGWLVTSDPSGILQELRIVDSI-KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
R+G+++++D I+++I K N+ T Q A + F+ E + ++
Sbjct: 230 RIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKE 281
Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV 380
+ +K+ P G+ +V + D EFA +L KE+ V +
Sbjct: 282 FDRRRRLVLKYVKDFGWEV--NNPIGAYYVFPNIG-------EDGREFAYKLLKEKFVAL 332
Query: 381 LPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQR 416
PG+ G KN++RI++A ++EGL RIK F +
Sbjct: 333 TPGIGFGSKGKNYIRISYANSYENIKEGLERIKEFLNK 370
>pdb|3OP7|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 1.70
A Resolution
pdb|3P6K|A Chain A, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
pdb|3P6K|B Chain B, Crystal Structure Of A Plp-Dependent Aminotransferase
(Zp_03625122.1) From Streptococcus Suis 89-1591 At 2.07
A Resolution
Length = 375
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 78/322 (24%), Positives = 142/322 (44%), Gaps = 20/322 (6%)
Query: 101 SELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHF 160
S+L + P+ + T G A ++L L PG +++ P + + E+ +
Sbjct: 73 SQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYDIPKSLGAEVDLW 132
Query: 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
+ E GW DL+ L L T + I N NP G V L+++ E A ++G ++S
Sbjct: 133 QIEEENGWLPDLEKLRQLIRPTTKXICINNANNPTGAVXDRTYLEELVEIASEVGAYILS 192
Query: 221 DEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280
DEVY + P + + V+ + V S+S + +PG R+GW+ + ++
Sbjct: 193 DEVYRSFSELDVPSI-IEVYDKGIAV---NSLSXTYSLPGIRIGWVAANH--------QV 240
Query: 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC 340
D ++ Y + + A V Q+ ++ + IL + I I+E P ++
Sbjct: 241 TDILRDYRDYTXICAGVFDDLVAQLALAHYQEILERNRHILEENLAILDQWIEEEPLVSY 300
Query: 341 PRKPEGSM-FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399
R S FV + ++ +F LQL +E V+++PG ++R+ FA E
Sbjct: 301 IRPAVVSTSFVKIAVDXPX-------EDFCLQLLQEHGVLLVPGNRFERDGYVRLGFACE 353
Query: 400 PSALEEGLGRIKAFCQRHAKQQ 421
L +GL ++ F +R K+
Sbjct: 354 QETLIKGLEKLSQFLRRFDKEN 375
>pdb|3ELE|A Chain A, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|B Chain B, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|C Chain C, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
pdb|3ELE|D Chain D, Crystal Structure Of Amino Transferase (rer070207001803)
From Eubacterium Rectale At 2.10 A Resolution
Length = 398
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 79/358 (22%), Positives = 159/358 (44%), Gaps = 51/358 (14%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP-K 140
Y+ + G + R AIA++LN+ + D++Y T G ++ + L + +
Sbjct: 72 YTSAQGDVETRAAIAEFLNNTHGTHFNADNLYXTXGAAASLSICFRALTSDAYDEFITIA 131
Query: 141 PGFPLYEA--NARHTRL-----EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193
P FP Y+ NA RL + HF ++D D LE + +T ++I +P N
Sbjct: 132 PYFPEYKVFVNAAGARLVEVPADTEHF--------QIDFDALEERINAHTRGVIINSPNN 183
Query: 194 PCGNVFTYQQLQKIAE----KARKLG--IMVISDEVYDHLTFGS--TPYVRMGVFGSTVP 245
P G V++ + ++K+++ K++++G I +I+DE Y + + P+V + +T
Sbjct: 184 PSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFV-TKYYDNT-- 240
Query: 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI 305
+ S SK +PG R+G+++ D + D + Y + P +
Sbjct: 241 -LVCYSYSKSLSLPGERIGYVLVPD--------EVYDKAELYAAVCGAGRALGYVCAPSL 291
Query: 306 FKN--TKEDFFSKIVDILRDTADICYDRIKEI--PCITCPRKPEGSMFVMVKLNLSLLEG 361
F+ K + ++ ++ D+ Y+ + I C KP+G+ + VK
Sbjct: 292 FQKXIVKCQGATGDINAYKENRDLLYEGLTRIGYHCF----KPDGAFYXFVK-------A 340
Query: 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
+ DD + AKEE V+++ G W+RI++ ++ ++ + +++ K
Sbjct: 341 LEDDSNAFCEKAKEEDVLIVAADGFGCPGWVRISYCVDREXIKHSXPAFEKIYKKYNK 398
>pdb|1BKG|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|C Chain C, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
pdb|1BKG|D Chain D, Aspartate Aminotransferase From Thermus Thermophilus With
Maleate
Length = 385
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/339 (22%), Positives = 146/339 (43%), Gaps = 22/339 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G KQA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V S ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
V V+PG +R+++A L + L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|2GB3|A Chain A, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|B Chain B, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|C Chain C, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|D Chain D, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|E Chain E, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
pdb|2GB3|F Chain F, Crystal Structure Of Aspartate Aminotransferase (Tm1698)
From Thermotoga Maritima At 2.50 A Resolution
Length = 409
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 134/294 (45%), Gaps = 30/294 (10%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
YS S GI R A A Y + P++V +T G +AI V+A PG IL+ +P
Sbjct: 75 YSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEP 134
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y A A+ +++ E+G+ + LE+ +E T +V+ NP NP G V+
Sbjct: 135 FYANYNAFAKIAGVKLIPVTRRXEEGFAIP-QNLESFINERTKGIVLSNPCNPTGVVYGK 193
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRW 256
+ + + E A + G+ +I DEVY + F G F S + V+ + S+S ++
Sbjct: 194 DEXRYLVEIAERHGLFLIVDEVYSEIVF-------RGEFASALSIESDKVVVIDSVSXKF 246
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQ-GAVPQIFKNTKEDFFS 315
G R+G L+T + I ++ +G L P Q G+V + N + FF
Sbjct: 247 SACGARVGCLITRNEELISHAXKLA---QGRL----APPLLEQIGSVGLL--NLDDSFFD 297
Query: 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
+ + R+ + +++E + KP G+ ++ +L + D EFA
Sbjct: 298 FVRETYRERVETVLKKLEE-HGLKRFTKPSGAFYITAELP------VEDAEEFA 344
>pdb|1B5O|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
pdb|1B5O|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Single
Mutant 1
Length = 385
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 145/339 (42%), Gaps = 22/339 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V S ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
V V+PG +R+++A L + L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1BJW|A Chain A, Aspartate Aminotransferase From Thermus Thermophilus
pdb|1BJW|B Chain B, Aspartate Aminotransferase From Thermus Thermophilus
Length = 382
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 144/333 (43%), Gaps = 22/333 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G KQA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGKQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ + + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAXAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V S ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSS-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRI 410
V V+PG +R+++A L + L R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERF 378
>pdb|1GCK|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1GCK|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1 Complexed With Aspartate
pdb|1B5P|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
pdb|1B5P|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Double
Mutant 1
Length = 385
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
V V+PG +R+++A L + L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|5BJ3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
pdb|5BJ3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 1
Length = 385
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
V V+PG +R+++A L + L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1GC3|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|E Chain E, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|F Chain F, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|G Chain G, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC3|H Chain H, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Tryptophan
pdb|1GC4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|C Chain C, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|1GC4|D Chain D, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2 Complexed With Aspartate
pdb|5BJ4|A Chain A, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
pdb|5BJ4|B Chain B, Thermus Thermophilus Aspartate Aminotransferase Tetra
Mutant 2
Length = 385
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 144/339 (42%), Gaps = 22/339 (6%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y+P GI R A+A+ E ++P++ +T G QA+ + + PG +++ P
Sbjct: 64 YAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+ Y R + + LPE+G+ D + + T A+V+ +P NP G V+
Sbjct: 124 YWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPK 183
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVP 259
+ L+ +A A + ++SDE+Y+HL + + G P +T+ +K + +
Sbjct: 184 EVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFSP----GRVAPEHTLTVNGAAKAFAMT 239
Query: 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKED--FFSKI 317
GWR+G+ P +++ + V ++ P T Q A + N + F
Sbjct: 240 GWRIGY--ACGPKEVIKAMASVSR-----QSTTSPDTIAQWATLEALTNQEASRAFVEMA 292
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
+ R D+ + + + +P G+ +V++ + I+ D A + E
Sbjct: 293 REAYRRRRDLLLEGLTALGLKAV--RPSGAFYVLMDTS-----PIAPDEVRAAERLLEAG 345
Query: 378 VIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416
V V+PG +R+++A L + L R R
Sbjct: 346 VAVVPGTDFAAFGHVRLSYATSEENLRKALERFARVLGR 384
>pdb|1U08|A Chain A, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function.
pdb|1U08|B Chain B, Crystal Structure And Reactivity Of Ybdl From Escherichia
Coli Identify A Methionine Aminotransferase Function
Length = 386
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/345 (25%), Positives = 148/345 (42%), Gaps = 38/345 (11%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPD---DVYLTAGCKQAIQVILTVLARPGANILL 138
Y+P G+ R AIA +E PD D+ +TAG +A+ +T L R G ++
Sbjct: 63 YAPMTGVQALREAIAQ--KTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVIC 120
Query: 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV 198
P + Y + ++ L P + VD AL E T +++ P NP V
Sbjct: 121 FDPSYDSYAPAIALSGGIVKRMALQPPH-FRVDWQEFAALLSERTRLVILNTPHNPSATV 179
Query: 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWI 257
+ + + I VISDEVY+H+ F + + + + S K +
Sbjct: 180 WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYH 239
Query: 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKI 317
+ GW++G+ V P+ I E+R + YL S T Q A+ + + E + + +
Sbjct: 240 MTGWKVGYCVA--PAPISAEIR---KVHQYLTFSVN--TPAQLALADMLRAEPEHYLA-L 291
Query: 318 VDILRDTADICYDRIKE-----IPCITCPRKPEGSMFVMVKLN-LSLLEGISDDMEFALQ 371
D R DI + + E +PC EG+ F++V + +S L DD+EF
Sbjct: 292 PDFYRQKRDILVNALNESRLEILPC-------EGTYFLLVDYSAVSTL----DDVEFCQW 340
Query: 372 LAKEESVIVLPGMAVGMKN-----WLRITFAIEPSALEEGLGRIK 411
L +E V +P ++V + +R+ FA + S L R++
Sbjct: 341 LTQEHGVAAIP-LSVFCADPFPHKLIRLCFAKKESTLLAAAERLR 384
>pdb|1YIY|A Chain A, Aedes Aegypti Kynurenine Aminotransferase
pdb|1YIY|B Chain B, Aedes Aegypti Kynurenine Aminotransferase
pdb|2R5C|B Chain B, Aedes Kynurenine Aminotransferase In Complex With Cysteine
pdb|2R5E|A Chain A, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
pdb|2R5E|B Chain B, Aedes Kynurenine Aminotransferase In Complex With
Glutamine
Length = 429
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 31/294 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK---- 166
+V +T G +A+ + G +++ +P F YE + R L P K
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 167 ----GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
W +D + LEAL +E T ++I P NP G V +L+ +A +K ++ +SDE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 223 VYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
VY+H+ F ++R+ G IT+GS K + + GW++GW P +L+ L++V
Sbjct: 223 VYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGW--AYGPEALLKNLQMV 280
Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKN------TKEDFFSKIVDILRDTADICYDRIKEI 335
+ N AT +Q A+ F+ + E +F+ I L D + E+
Sbjct: 281 -----HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335
Query: 336 PCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKEESVIVLP 382
P P+G F++ K++L+ D F + K + +P
Sbjct: 336 G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 387
>pdb|1YIZ|A Chain A, Aedes Aegypti Kynurenine Aminotrasferase
pdb|1YIZ|B Chain B, Aedes Aegypti Kynurenine Aminotrasferase
pdb|2R5C|A Chain A, Aedes Kynurenine Aminotransferase In Complex With Cysteine
Length = 429
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 31/294 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK---- 166
+V +T G +A+ + G +++ +P F YE + R L P K
Sbjct: 103 EVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGT 162
Query: 167 ----GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222
W +D + LEAL +E T ++I P NP G V +L+ +A +K ++ +SDE
Sbjct: 163 ISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDE 222
Query: 223 VYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281
VY+H+ F ++R+ G IT+GS + + GW++GW P +L+ L++V
Sbjct: 223 VYEHMVFEPFEHIRICTLPGMWERTITIGSAGXTFSLTGWKIGW--AYGPEALLKNLQMV 280
Query: 282 DSIKGYLNISSGPATFVQGAVPQIFKN------TKEDFFSKIVDILRDTADICYDRIKEI 335
+ N AT +Q A+ F+ + E +F+ I L D + E+
Sbjct: 281 -----HQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV 335
Query: 336 PCITCPRKPEGSMFVMV-------KLNLSLLEGISDDMEFALQLAKEESVIVLP 382
P P+G F++ K++L+ D F + K + +P
Sbjct: 336 G--MNPTVPQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIP 387
>pdb|3TCM|A Chain A, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
pdb|3TCM|B Chain B, Crystal Structure Of Alanine Aminotransferase From Hordeum
Vulgare
Length = 500
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 155/338 (45%), Gaps = 36/338 (10%)
Query: 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLP 139
YS S GI R AIA + S + DD++LT G + +++ +L R + IL+P
Sbjct: 129 AYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVP 188
Query: 140 KPGFPLYEAN-ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPG 192
P +PLY A+ A H + ++ L GW ++ ++ ++ N A+V++NPG
Sbjct: 189 IPQYPLYSASIALHGGALVPYY-LNESTGWGLETSDVKKQLEDARSRGINVRALVVINPG 247
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVY------DHLTFGSTPYV--RMGVFGSTV 244
NP G V + I + + G+++++DEVY D+ F S + +G +
Sbjct: 248 NPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGEEDL 307
Query: 245 PVITLGSMSKRWIVP-GWRLGWL-VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV 302
P+++ S+SK + G R G+ +T + + +++ + S+ NI+ + V
Sbjct: 308 PLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASVNLCSNIT---GQILASLV 364
Query: 303 PQIFKNTKEDFFS------KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356
K + E + S I+ L A ++ ITC + EG+M+V ++ L
Sbjct: 365 MNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICL 423
Query: 357 -------SLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
+ + D +AL+L + ++V+PG G
Sbjct: 424 PQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFG 461
>pdb|1WST|A Chain A, Crystal Structure Of Multiple Substrate Aminotransferase
(Msat) From Thermococcus Profundus
Length = 417
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 154/353 (43%), Gaps = 31/353 (8%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y + G P R A+A ++ +S ++ AG +QA+ +I V PG I++
Sbjct: 79 YGTTKGFTPLRLALARWMEKRYDIPMSKVEIMTVAGSQQALDLIGRVFLNPGDPIVVEA- 137
Query: 142 GFPLYEANARHTRLEIRHFDLLP--EKGWEVDLDGLEALADEN-----TVAMVIVNPGNP 194
P Y A + + F +P +KG VDL + + + NP
Sbjct: 138 --PTYLAAIQAFKYYDPEFISIPLDDKGMRVDLLEEKLEELRKQGKRVKIVYTVSTFQNP 195
Query: 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254
G + + +K+ E A + +++ D Y L + P + F VI LG+ SK
Sbjct: 196 AGVTMSVDRRKKLLELANEYDFLIVEDGPYSELRYSGEPTPPIKHFDDYGRVIYLGTFSK 255
Query: 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-EDF 313
+ PG+R+GW V + P I R ++ K +++ + TF Q + +N ++
Sbjct: 256 -ILAPGFRIGW-VAAHPHLI----RKMEIAKQSIDLCTN--TFGQAIAWKYVENGYLDEH 307
Query: 314 FSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQL 372
KI++ + D + ++E +P KPEG MFV V +L EGI D + ++
Sbjct: 308 IPKIIEFYKPRRDAMLEALEEYMPEGVEWTKPEGGMFVRV----TLPEGI--DTKLMMER 361
Query: 373 AKEESVIVLPGMAVGM----KNWLRITFAIEP-SALEEGLGRIKAFCQRHAKQ 420
A + V +PG A + KN +R+ F P + EG+ R+ + K+
Sbjct: 362 AVAKGVAYVPGEAFFVHRDKKNTMRLNFTYVPEETIREGVRRLAETIKEEMKR 414
>pdb|2O0R|A Chain A, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
pdb|2O0R|B Chain B, The Three-Dimensional Structure Of
N-Succinyldiaminopimelate Aminotransferase From
Mycobacterium Tuberculosis
Length = 411
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/326 (27%), Positives = 147/326 (45%), Gaps = 34/326 (10%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPE-K 166
+V +T G +AI + L PG+ +LL +P + Y A A R+ + L+P+ +
Sbjct: 88 EVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTV---PLVPDGR 144
Query: 167 GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226
G+ +D D L T A++I +P NP G V + +L IAE A ++VI+DEVY+H
Sbjct: 145 GFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEH 204
Query: 227 LTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285
L F ++ + F G IT+ S + + GW++GW P+ ++ +R + K
Sbjct: 205 LVFDHARHLPLAGFDGMAERTITISSAAXMFNCTGWKIGW--ACGPAELIAGVR---AAK 259
Query: 286 GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345
YL+ G A F Q AV + +T++ + + + + LR D + EI
Sbjct: 260 QYLSYVGG-APF-QPAV-ALALDTEDAWVAALRNSLRARRDRLAAGLTEIGFAV--HDSY 314
Query: 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP---------GMAVGMKN-W---L 392
G+ F+ G D EF L ++ V +P G A + W +
Sbjct: 315 GTYFLCADPRPL---GYDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLV 371
Query: 393 RITFAIEPSALEEGLGRIKAFCQRHA 418
R TF L+E + R+ +R A
Sbjct: 372 RFTFCKRDDTLDEAIRRLSVLAERPA 397
>pdb|3B46|A Chain A, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
pdb|3B46|B Chain B, Crystal Structure Of Bna3p, A Putative Kynurenine
Aminotransferase From Saccharomyces Cerevisiae
Length = 447
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 144/360 (40%), Gaps = 39/360 (10%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
YSP+ G ++ + +L ++V +T G + I L L G +++ +P
Sbjct: 91 YSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEP 150
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKG----------WEVDLDGLEALADENTVAMVIVNP 191
F Y N ++ + + P K W +D + E T A++I P
Sbjct: 151 FFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210
Query: 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL-- 249
NP G VFT ++L + K +++ISDEVY+HL F + + R+ + +TL
Sbjct: 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDS-FTRIATLSPEIGQLTLTV 269
Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKN 308
GS + GWR+GW+++ L + + K + I + P+ + I
Sbjct: 270 GSAGXSFAATGWRIGWVLS------LNAELLSYAAKAHTRICFASPSPLQEACANSINDA 323
Query: 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-------EG 361
K +F K+ + I E+ PEG+ FV+V + + E
Sbjct: 324 LKIGYFEKMRQEYINKFKIFTSIFDELGLPYT--APEGTYFVLVDFSKVKIPEDYPYPEE 381
Query: 362 ISD---DMEFALQLAKEESVIVLPGMAVGMK-------NWLRITFAIEPSALEEGLGRIK 411
I + D + L E V+ +P +K N LR + + LE + R+K
Sbjct: 382 ILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVERLK 441
>pdb|1W7N|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Pmp Form
Length = 422
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 153/365 (41%), Gaps = 42/365 (11%)
Query: 46 IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
++ LG G P FP P S +F + Y+ + G P + +A + L
Sbjct: 30 VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
++ P +V +T G A+ L G +++ +P F YE A R +
Sbjct: 85 GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
I++ +L W++D L T A+V+ P NP G VF+ ++L+ +A +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
+ ++ I+DEVY + + ++ + G +T+GS K + GW++GW++ P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGKTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
I++ LR V + N T Q AV + F+ + +F + ++
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
D ++ + P P+GS F++ K + L G D D F + K +
Sbjct: 318 DHMIRSLQSVGL--KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
++ +P
Sbjct: 376 LVAIP 380
>pdb|3IHJ|A Chain A, Human Alanine Aminotransferase 2 In Complex With Plp
Length = 498
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 86/373 (23%), Positives = 162/373 (43%), Gaps = 49/373 (13%)
Query: 82 YSPSVGILPARRAIADYL---NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN--- 135
YS S G+ R +A Y+ + +P PD++YLT G I IL +L G
Sbjct: 125 YSASQGVNCIREDVAAYITRRDGGVPA--DPDNIYLTTGASDGISTILKILVSGGGKSRT 182
Query: 136 -ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIV 189
+++P P +PLY A ++ L E W ++++ L E + + I+
Sbjct: 183 GVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCII 242
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHL--------TFGSTPYVRMGVF 240
NPGNP G V + + ++ + A + + +++DEVY D++ +F Y +
Sbjct: 243 NPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEY 302
Query: 241 GSTVPVITLGSMSKRWIVP-GWRLGWL----VTSDPSGILQEL---RIVDSIKGY--LNI 290
S V + + S SK ++ G+R G++ + + G L +L R+ + G ++I
Sbjct: 303 SSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVRLCPPVSGQAAMDI 362
Query: 291 SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV 350
P + + Q F KE + + T D+ ++P I C +G+M+
Sbjct: 363 VVNPPVAGEESFEQ-FSREKESVLGNLAKKAKLTEDL----FNQVPGIHC-NPLQGAMYA 416
Query: 351 MVKLNL-------SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN---WLRITFAIEP 400
++ + + ++ DM + ++L +E + V+PG G + R+T
Sbjct: 417 FPRIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPV 476
Query: 401 SALEEGLGRIKAF 413
L+ L ++K F
Sbjct: 477 EKLKTVLQKVKDF 489
>pdb|3H14|A Chain A, Crystal Structure Of A Putative Aminotransferase From
Silicibacter Pomeroyi
Length = 391
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/353 (22%), Positives = 142/353 (40%), Gaps = 31/353 (8%)
Query: 75 RSAEFDC--YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP 132
+S E D Y+ ++G+ R+ IA L P V +T G + T L
Sbjct: 55 KSLETDALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDS 114
Query: 133 GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE---VDLDGLEALADENTVAMVIV 189
G + + PG+P Y R L PE + D GL + + +
Sbjct: 115 GDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL------DLAGLXVA 168
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249
+P NP G + + E A+ G ISDE+Y + + + + + T +
Sbjct: 169 SPANPTGTXLDHAAXGALIEAAQAQGASFISDEIYHGIEYEAKAVTALEL---TDECYVI 225
Query: 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309
S SK + GWR+GW V + ++R+V+ I I + A+ V +
Sbjct: 226 NSFSKYFSXTGWRVGWXVVPE-----DQVRVVERIAQNXFICAPHAS----QVAALAALD 276
Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFA 369
+ +D+ + + +R+ + T P+G+ +V ++ + D FA
Sbjct: 277 CDAELQANLDVYKANRKLXLERLPKA-GFTRIAPPDGAFYVYADVS----DLTDDSRAFA 331
Query: 370 LQLAKEESVIVLPGMAVGMK---NWLRITFAIEPSALEEGLGRIKAFCQRHAK 419
++ ++ V V PG+ + LR ++A + +EEGL R++AF Q +
Sbjct: 332 AEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFXQARGE 384
>pdb|2EGY|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2EGY|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Substrate Free Form), From Thermus
Thermophilus Hb27
pdb|2ZP7|C Chain C, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|D Chain D, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|F Chain F, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|3CBF|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|3CBF|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase, From Thermus Thermophilus Hb27
pdb|2Z1Y|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2Z1Y|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Leucine), From Thermus
Thermophilus Hb27
pdb|2ZP7|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZP7|E Chain E, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Leucine Complex), From Thermus
Thermophilus Hb27
pdb|2ZYJ|A Chain A, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
pdb|2ZYJ|B Chain B, Crystal Structure Of Lysn, Alpha-Aminoadipate
Aminotransferase (Complexed With
N-(5'-Phosphopyridoxyl)-L-Glutamate), From Thermus
Thermophilus Hb27
Length = 397
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 155/342 (45%), Gaps = 38/342 (11%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
YSP+ G P R +A+++ + P++V +T G +QA+ ++ V G+ +LL P
Sbjct: 70 YSPTEGYAPLRAFVAEWIG------VRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAP 123
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG--NPCGNVF 199
Y + RL+ F +P DLD LE + + + P NP G +
Sbjct: 124 S---YMGAIQAFRLQGPRFLTVPAGEEGPDLDALEEVLKRERPRFLYLIPSFQNPTGGLT 180
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFGSTVP-VITLGSMSKRW 256
+++ + + G++V+ D+ Y L FG P + + P VI LGS SK
Sbjct: 181 PLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSFSK-V 239
Query: 257 IVPGWRLGWLVTSDPS--GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFF 314
+ PG R+ + V + ++Q + D LN Q V ++ K +
Sbjct: 240 LSPGLRVAFAVAHPEALQKLVQAKQGADLHTPMLN---------QMLVHELLKEGFSERL 290
Query: 315 SKIVDILRDTADICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA 373
++ + R+ A + +E+P +P+G MFV ++L +G+S + F + A
Sbjct: 291 ERVRRVYREKAQAMLHALDREVPKEVRYTRPKGGMFVWMELP----KGLSAEGLF--RRA 344
Query: 374 KEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRI 410
EE+V +PG G +N LR+++A ++ + EG+ R+
Sbjct: 345 LEENVAFVPGGPFFANGGGENTLRLSYATLDREGIAEGVRRL 386
>pdb|3E2Z|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|3E2Y|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
pdb|3E2Y|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Glutamine
Length = 410
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 132/299 (44%), Gaps = 39/299 (13%)
Query: 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR-------LEIRHFDL 162
+++ + G ++ + L PG +++ P + YE R L + D
Sbjct: 86 EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 163 LP--EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
+ W D LE+ T A+++ P NP G V+T Q+LQ IA+ K + IS
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 221 DEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
DEVY+ L + +V++ G IT+GS K + V GW+LGW + P+ +++ L+
Sbjct: 206 DEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTFSVTGWKLGWSI--GPAHLIKHLQ 263
Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIF------KNTKEDFFS---KIVDILRDTADICYD 330
V Y AT +Q A+ + F + E +F+ K +++ RD +
Sbjct: 264 TVQQNSFYTC-----ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318
Query: 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD-------DMEFALQLAKEESVIVLP 382
+ P + P+G F++ ++ SL +SD D +F + K + + +P
Sbjct: 319 SVGLKPIV-----PDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP 371
>pdb|1W7L|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
pdb|1W7M|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With L-Phe
Length = 422
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 42/365 (11%)
Query: 46 IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
++ LG G P FP P S +F + Y+ + G P + +A + L
Sbjct: 30 VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
++ P +V +T G A+ L G +++ +P F YE A R +
Sbjct: 85 GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
I++ +L W++D L T A+V+ P NP G VF+ ++L+ +A +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
+ ++ I+DEVY + + ++ + G +T+GS + GW++GW++ P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
I++ LR V + N T Q AV + F+ + +F + ++
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
D ++ + P P+GS F++ K + L G D D F + K +
Sbjct: 318 DHMIRSLQSVGL--KPLIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
++ +P
Sbjct: 376 LVAIP 380
>pdb|3FVS|A Chain A, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVS|B Chain B, Human Kynurenine Aminotransferase I In Complex With
Glycerol
pdb|3FVU|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVU|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase I
In Complex With Indole-3-acetic Acid
pdb|3FVX|A Chain A, Human Kynurenine Aminotransferase I In Complex With Tris
pdb|3FVX|B Chain B, Human Kynurenine Aminotransferase I In Complex With Tris
Length = 422
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/365 (22%), Positives = 152/365 (41%), Gaps = 42/365 (11%)
Query: 46 IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEF--DCYSPSVGILPARRAIADYLNSEL 103
++ LG G P FP P S +F + Y+ + G P + +A + L
Sbjct: 30 VVNLGQGFPD-FP----PPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKILASFFGELL 84
Query: 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-----ANARHTRLE- 156
++ P +V +T G A+ L G +++ +P F YE A R +
Sbjct: 85 GQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSL 144
Query: 157 ----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
I++ +L W++D L T A+V+ P NP G VF+ ++L+ +A +
Sbjct: 145 KPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQ 204
Query: 213 KLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271
+ ++ I+DEVY + + ++ + G +T+GS + GW++GW++ P
Sbjct: 205 QHDVVCITDEVYQWMVYDGHQHISIASLPGMWERTLTIGSAGXTFSATGWKVGWVL--GP 262
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK------EDFFSKIVDILRDTA 325
I++ LR V + N T Q AV + F+ + +F + ++
Sbjct: 263 DHIMKHLRTV-----HQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQFPQAMQRCR 317
Query: 326 DICYDRIKEIPCITCPRKPEGSMFVMV-----KLNLSLLEGISD---DMEFALQLAKEES 377
D ++ + P P+GS F++ K + L G D D F + K +
Sbjct: 318 DHMIRSLQSVGL--KPIIPQGSYFLITDISDFKRKMPDLPGAVDEPYDRRFVKWMIKNKG 375
Query: 378 VIVLP 382
++ +P
Sbjct: 376 LVAIP 380
>pdb|3AOV|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOV|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Plp
pdb|3AOW|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3AOW|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Akg
pdb|3ATH|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3ATH|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Four Akgs As Substrates
And Allosteric Effectors
pdb|3AV7|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
pdb|3AV7|C Chain C, Crystal Structure Of Pyrococcus Horikoshii Kynurenine
Aminotransferase In Complex With Pmp, Kyn As Substrates
And Kya As Products
Length = 448
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y + G P R + +L +D+ +T+G +QA+ +I V PG +++ P
Sbjct: 114 YGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAP 172
Query: 142 -------GFPLYEANARHTRL--EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
F YE L E ++L EK L L++ + V +
Sbjct: 173 TYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVPTFQ 227
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G + + + E A + +V+ D+ Y L + P ++ + VI LG+
Sbjct: 228 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 287
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV---PQIFKNT 309
SK + PG+R+GW+V DP GI++++ I S+ T V G V +
Sbjct: 288 SK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQ-------STDLCTNVFGQVVAWRYVDGGY 337
Query: 310 KEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368
E +I + D + ++E +P KPEG MF+ V +L +GI D +
Sbjct: 338 LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGI--DSKK 391
Query: 369 ALQLAKEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419
L+ A ++ V +PG A +KN +R+ F ++ + EG+ R+ + K
Sbjct: 392 MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 447
>pdb|1X0M|A Chain A, A Human Kynurenine Aminotransferase Ii Homologue From
Pyrococcus Horikoshii Ot3
Length = 403
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 152/356 (42%), Gaps = 40/356 (11%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y + G P R + +L +D+ +T+G +QA+ +I V PG +++ P
Sbjct: 69 YGTTKGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAP 127
Query: 142 -------GFPLYEANARHTRL--EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192
F YE L E ++L EK L L++ + V +
Sbjct: 128 TYLAALQAFNFYEPQYIQIPLDDEGMKVEILEEK-----LKELKSQGKKVKVVYTVPTFQ 182
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G + + + E A + +V+ D+ Y L + P ++ + VI LG+
Sbjct: 183 NPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEGRVIYLGTF 242
Query: 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV---PQIFKNT 309
SK + PG+R+GW+V DP GI++++ I S+ T V G V +
Sbjct: 243 SK-ILAPGFRIGWMV-GDP-GIIRKMEIAKQ-------STDLCTNVFGQVVAWRYVDGGY 292
Query: 310 KEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368
E +I + D + ++E +P KPEG MF+ V +L +GI D +
Sbjct: 293 LEKHIPEIRKFYKPRRDAMLEALEEFMPEGVKWTKPEGGMFIWV----TLPDGI--DSKK 346
Query: 369 ALQLAKEESVIVLPGMAV----GMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419
L+ A ++ V +PG A +KN +R+ F ++ + EG+ R+ + K
Sbjct: 347 MLERAIKKGVAYVPGEAFYAHRDVKNTMRLNFTYVDEDKIMEGIKRLAETIKEELK 402
>pdb|3E2F|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2F|B Chain B, Crystal Structure Of Mouse Kynurenine Aminotransferase
Iii, Plp-Bound Form
pdb|3E2Z|A Chain A, Crystal Structure Of Mouse Kynurenine Aminotransferase Iii
In Complex With Kynurenine
pdb|2ZJG|A Chain A, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
pdb|2ZJG|B Chain B, Crystal Structural Of Mouse Kynurenine Aminotransferase
Iii
Length = 410
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/299 (24%), Positives = 131/299 (43%), Gaps = 39/299 (13%)
Query: 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR-------LEIRHFDL 162
+++ + G ++ + L PG +++ P + YE R L + D
Sbjct: 86 EEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDG 145
Query: 163 LP--EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220
+ W D LE+ T A+++ P NP G V+T Q+LQ IA+ K + IS
Sbjct: 146 MKWTSSDWTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCIS 205
Query: 221 DEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279
DEVY+ L + +V++ G IT+GS + V GW+LGW + P+ +++ L+
Sbjct: 206 DEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGXTFSVTGWKLGWSI--GPAHLIKHLQ 263
Query: 280 IVDSIKGYLNISSGPATFVQGAVPQIF------KNTKEDFFS---KIVDILRDTADICYD 330
V Y AT +Q A+ + F + E +F+ K +++ RD +
Sbjct: 264 TVQQNSFYTC-----ATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLN 318
Query: 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD-------DMEFALQLAKEESVIVLP 382
+ P + P+G F++ ++ SL +SD D +F + K + + +P
Sbjct: 319 SVGLKPIV-----PDGGYFIIADVS-SLGADLSDMNSDEPYDYKFVKWMTKHKKLTAIP 371
>pdb|2X5D|A Chain A, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|B Chain B, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|C Chain C, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
pdb|2X5D|D Chain D, Crystal Structure Of A Probable Aminotransferase From
Pseudomonas Aeruginosa
Length = 412
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 148/356 (41%), Gaps = 20/356 (5%)
Query: 46 IIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSELPC 105
II L G+P T P + + YS S GI RRAI+ +
Sbjct: 39 IIDLSMGNPDG----PTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWYRDRYDV 94
Query: 106 KLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164
++ P+ + +T G K+ + ++ G IL+P P +P++ A ++R L+P
Sbjct: 95 QIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVP 154
Query: 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
+ +L+ + M++ P NP +++ A++ +MV+ D Y
Sbjct: 155 GIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAY 214
Query: 225 DHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282
+ + P + M V G+ + ++SK + + GWR+G++V G + + +
Sbjct: 215 ADIVYDGWKAPSI-MQVPGAKDIAVEFFTLSKSYNMAGWRIGFMV-----GNPELVSALA 268
Query: 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342
IK Y + G T +Q A + ++ I + D+ ++E +
Sbjct: 269 RIKSYHDY--GTFTPLQVAAIAALEGDQQ-CVRDIARQYQQRRDVLVKGLREAGWMV--E 323
Query: 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAI 398
P+ SM+V K+ S +EFA +L ++ V V PG+ G + FA+
Sbjct: 324 NPKASMYVWAKIPEPYAHLGS--LEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFAL 377
>pdb|3PIU|A Chain A, High-Resolution Structure Of Native Malus Domestica Acc
Synthase
Length = 410
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/360 (23%), Positives = 152/360 (42%), Gaps = 37/360 (10%)
Query: 77 AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
AE + G+ ++A+ D++ K++ P+ + LTAG A + + LA PG
Sbjct: 60 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 119
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
+L+P P +P ++ + + T +EI G+++ LE E ++
Sbjct: 120 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 179
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTV-- 244
+ NP NP G T +L + GI +ISDE+Y F S ++ M V V
Sbjct: 180 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDEVWQ 239
Query: 245 PVITLGSMSKRWI-VPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNISSGPATF 297
V + S+S + + +PG+R+G + ++D + + +V S + L+
Sbjct: 240 RVHVVYSLSXKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAMLSDKKL 299
Query: 298 VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357
+ + + K K+ K+V L+ + I+C G +F V +
Sbjct: 300 TKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCWVDMRHL 345
Query: 358 LLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGLGRIKAF 413
L + +ME ++ E + + PG + W R+ FA P L+ + R+KAF
Sbjct: 346 LRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAMQRLKAF 405
>pdb|1YNU|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
L-Vinylglycine
Length = 473
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77 AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
AE + G+ ++A+ D++ K++ P+ + LTAG A + + LA PG
Sbjct: 77 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
+L+P P +P ++ + + T +EI G+++ LE E ++
Sbjct: 137 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 196
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
+ NP NP G T +L + GI +ISDE+Y F S ++ M V
Sbjct: 197 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 256
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
S V V + S+SK +PG+R+G + ++D + + +V S + L+
Sbjct: 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 316
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
+ + + K K+ K+V L+ + I+C G +F
Sbjct: 317 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 362
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
V + L + +ME ++ E + + PG + W R+ FA P L+ +
Sbjct: 363 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 422
Query: 408 GRIKAF 413
R+KAF
Sbjct: 423 QRLKAF 428
>pdb|1B8G|A Chain A, 1-aminocyclopropane-1-carboxylate Synthase
pdb|1B8G|B Chain B, 1-aminocyclopropane-1-carboxylate Synthase
Length = 429
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77 AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
AE + G+ ++A+ D++ K++ P+ + LTAG A + + LA PG
Sbjct: 75 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 134
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
+L+P P +P ++ + + T +EI G+++ LE E ++
Sbjct: 135 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 194
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
+ NP NP G T +L + GI +ISDE+Y F S ++ M V
Sbjct: 195 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 254
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
S V V + S+SK +PG+R+G + ++D + + +V S + L+
Sbjct: 255 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 314
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
+ + + K K+ K+V L+ + I+C G +F
Sbjct: 315 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 360
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
V + L + +ME ++ E + + PG + W R+ FA P L+ +
Sbjct: 361 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 420
Query: 408 GRIKAF 413
R+KAF
Sbjct: 421 QRLKAF 426
>pdb|1M7Y|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With L-
Aminoethoxyvinylglycine
pdb|1M4N|A Chain A, Crystal Structure Of Apple Acc Synthase In Complex With
[2-(Amino-
Oxy)ethyl](5'-Deoxyadenosin-5'-Yl)(Methyl)sulfonium
Length = 435
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/366 (23%), Positives = 152/366 (41%), Gaps = 43/366 (11%)
Query: 77 AEFDCYSPSVGILPARRAIADYLNSELPCKLS--PDDVYLTAGCKQAIQVILTVLARPGA 134
AE + G+ ++A+ D++ K++ P+ + LTAG A + + LA PG
Sbjct: 77 AELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGE 136
Query: 135 NILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMV 187
+L+P P +P ++ + + T +EI G+++ LE E ++
Sbjct: 137 AVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVL 196
Query: 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF------ 240
+ NP NP G T +L + GI +ISDE+Y F S ++ M V
Sbjct: 197 VTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCD 256
Query: 241 -GSTV--PVITLGSMSKRWIVPGWRLGWLVTSDPSGI-----LQELRIVDS-IKGYLNIS 291
S V V + S+SK +PG+R+G + ++D + + +V S + L+
Sbjct: 257 ENSEVWQRVHVVYSLSKDLGLPGFRVGAIYSNDDMVVAAATKMSSFGLVSSQTQHLLSAM 316
Query: 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351
+ + + K K+ K+V L+ + I+C G +F
Sbjct: 317 LSDKKLTKNYIAENHKRLKQR-QKKLVSGLQKSG------------ISCLNGNAG-LFCW 362
Query: 352 VKLNLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFAIEPS-ALEEGL 407
V + L + +ME ++ E + + PG + W R+ FA P L+ +
Sbjct: 363 VDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLAM 422
Query: 408 GRIKAF 413
R+KAF
Sbjct: 423 QRLKAF 428
>pdb|3B1C|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1C|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus: Internal Aldimine Form
pdb|3B1D|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1D|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: External Aldimine
Form
pdb|3B1E|A Chain A, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|B Chain B, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|C Chain C, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
pdb|3B1E|D Chain D, Crystal Structure Of Betac-S Lyase From Streptococcus
Anginosus In Complex With L-Serine: Alpha-Aminoacrylate
Form
Length = 392
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 142/328 (43%), Gaps = 24/328 (7%)
Query: 93 RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
+A+ D+ SE +D+ G AI + + + G +L+ P +P + + R
Sbjct: 73 QAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFARSVRL 132
Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQQLQKIAEK 210
++ L E G +++D + LE EN V + ++ NP NP G V+ + L++I
Sbjct: 133 NNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHL 192
Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-----VITLGSMSKRWIVPGWRLGW 265
+K ++++SDE++ LT +V F + P + L S +K + + G + +
Sbjct: 193 CQKHHVILVSDEIHQDLTLFGHEHVS---FNTVSPDFKDFALVLSSATKTFNIAGTKNSY 249
Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
+ +P+ + + + + + +SS + A + + + +L +
Sbjct: 250 AIIENPT-LCAQFKHQQLVNNHHEVSSLGYIATETAY-----RYGKPWLVALKAVLEENI 303
Query: 326 DICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM 384
+ +E P + KP+G+ + + + G++DD F L L + VI+ G
Sbjct: 304 QFAVEYFAQEAPRLKV-MKPQGTYLIWLDFSDY---GLTDDALFTL-LHDQAKVILNRGS 358
Query: 385 AVGMKNWL--RITFAIEPSALEEGLGRI 410
G + L R+ A S +EE RI
Sbjct: 359 DYGSEGELHARLNIAAPKSLVEEICKRI 386
>pdb|4GE7|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE7|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLXKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTP-YVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F G P ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G VI S SK I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|2ZC0|A Chain A, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|B Chain B, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|C Chain C, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
pdb|2ZC0|D Chain D, Crystal Structure Of An Archaeal Alanine:glyoxylate
Aminotransferase
Length = 407
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/363 (23%), Positives = 155/363 (42%), Gaps = 51/363 (14%)
Query: 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140
Y+P+ GI R +A +L ++SP+++ +T G A+ ++ VL PG ++
Sbjct: 70 MYTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITEN 129
Query: 141 PGF-----PLYEANARHTRLEIRH----FDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191
P + + A+ + + + DLL EK E L+A + + I
Sbjct: 130 PSYINTLLAFEQLGAKIEGVPVDNDGMRVDLLEEKIKE-----LKAKGQKVKLIYTIPTG 184
Query: 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS 251
NP G + ++ + + E A K +++I D Y+ + + V + + VI G+
Sbjct: 185 QNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGT 244
Query: 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI--FKNT 309
+SK + G+R+GW++ IL+++ + P F A+ Q +
Sbjct: 245 LSK-VLGTGFRIGWIIAE--GEILKKVL----------MQKQPIDFCAPAISQYIALEYL 291
Query: 310 KEDFFSKIVDILRDTADICYDRIKEIPCITCPR--------KPEGSMFVMVKLNLSLLEG 361
K +F K + A + Y ++I KP MFVM L EG
Sbjct: 292 KRGYFEK---YHLEGALLGYKEKRDIMLKALENHLPNAEFTKPIAGMFVM----FFLPEG 344
Query: 362 ISDDMEFALQLAKEESVIVLPGMAV----GMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417
+D + FA +L + E V+V+PG KN +R+ F+ PS E +G IK + +
Sbjct: 345 -ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFS-RPSKEEIPIG-IKKLAKLY 401
Query: 418 AKQ 420
++
Sbjct: 402 KEK 404
>pdb|4GDY|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GDY|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE4|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|C Chain C, Kynurenine Aminotransferase Ii Inhibitors
pdb|4GE9|D Chain D, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 150/348 (43%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTP-YVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F G P ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNSGRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G VI S SK I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|2XH1|A Chain A, Crystal Structure Of Human Kat Ii-Inhibitor Complex
pdb|2XH1|B Chain B, Crystal Structure Of Human Kat Ii-Inhibitor Complex
Length = 425
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G VI S SK I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|3UE8|A Chain A, Kynurenine Aminotransferase Ii Inhibitors
pdb|3UE8|B Chain B, Kynurenine Aminotransferase Ii Inhibitors
Length = 439
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G VI S SK I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|2R2N|A Chain A, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|B Chain B, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|C Chain C, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
pdb|2R2N|D Chain D, The Crystal Structure Of Human Kynurenine Aminotransferase
Ii In Complex With Kynurenine
Length = 425
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 148/348 (42%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G VI S SK I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GR---VIRADSFSK-IISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|4DGT|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DGT|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630 Crystallized With
Magnesium Formate
pdb|4DQ6|A Chain A, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
pdb|4DQ6|B Chain B, Crystal Structure Of Plp-Bound Putative Aminotransferase
From Clostridium Difficile 630
Length = 391
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/326 (22%), Positives = 140/326 (42%), Gaps = 17/326 (5%)
Query: 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
+I ++L K+ + + + G AI +++ L + I++ +P + + + +
Sbjct: 73 NESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFNSVVK 132
Query: 152 HTRLE--IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE 209
+ E I L + +D + +E ++ ++ NP NP G V+T +L+K+ +
Sbjct: 133 NNNRELIISPLQKLENGNYIMDYEDIENKI-KDVKLFILCNPHNPVGRVWTKDELKKLGD 191
Query: 210 KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLV 267
K + +ISDE++ + ++ M T+ M +K + + G + ++V
Sbjct: 192 ICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVV 251
Query: 268 TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327
D ++ +++D ++I F A + N E + ++ L D
Sbjct: 252 LPDE----KDYKLLDDAFTRIDIKRNNC-FSLVATEASY-NNGESWLESFLEYLESNIDF 305
Query: 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
I E RKPEG+ + V + S L G+SD+ E L ++ V + G + G
Sbjct: 306 AIKYINENMPKLKVRKPEGTYLLWV--DFSAL-GLSDE-ELESILVQKGKVALNQGNSFG 361
Query: 388 M--KNWLRITFAIEPSALEEGLGRIK 411
+ + RI A S LEE L RIK
Sbjct: 362 IGGSGYQRINLACPRSMLEEALIRIK 387
>pdb|2VGZ|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2VGZ|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
Length = 427
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 76 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 135
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 136 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 194
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F ++ M V
Sbjct: 195 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 254
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G + + + I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 255 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 302
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 303 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 361
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 362 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 405
>pdb|2QLR|A Chain A, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|B Chain B, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|C Chain C, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|2QLR|D Chain D, Crystal Structure Of Human Kynurenine Aminotransferase Ii
pdb|3DC1|A Chain A, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|B Chain B, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|C Chain C, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
pdb|3DC1|D Chain D, Crystal Structure Of Kynurenine Aminotransferase Ii
Complex With Alpha-Ketoglutarate
Length = 425
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/348 (22%), Positives = 146/348 (41%), Gaps = 50/348 (14%)
Query: 82 YSPSVGI---LPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLARPGA 134
YSPS GI L + + L++ P D+ +T+G +Q + + ++ PG
Sbjct: 74 YSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGD 133
Query: 135 NILLPKPGFP-----LYEANARHTRLEIRHFDLLPEK------GWEVDLDGLEALADENT 183
N+LL +P + L+ + ++P+ W+ + D +
Sbjct: 134 NVLLDEPAYSGTLQSLHPLGCNIINVASDESGIVPDSLRDILSRWKPE-DAKNPQKNTPK 192
Query: 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS---TPYVRMGVF 240
+ N NP GN T ++ ++I E ARK ++I D+ Y L F ++ M V
Sbjct: 193 FLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVD 252
Query: 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQ 299
G + + + I G R+G+L P +++ + ++ +S+ P+TF Q
Sbjct: 253 GRVIRADSFSXI----ISSGLRIGFLTGPKP--------LIERVILHIQVSTLHPSTFNQ 300
Query: 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRI-----KEIPCITCPRKPEGSMFVMVKL 354
+ Q+ E+ F VD + D D I K + + P MF+ +K
Sbjct: 301 LMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIK- 359
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN-----WLRITFA 397
++GI+D E + A + V++LPG A + + +LR +F+
Sbjct: 360 ----VKGINDVKELIEEKAVKMGVLMLPGNAFYVDSSAPSPYLRASFS 403
>pdb|2DOU|A Chain A, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
pdb|2DOU|B Chain B, Probable N-Succinyldiaminopimelate Aminotransferase
(Ttha0342) From Thermus Thermophilus Hb8
Length = 376
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 122/262 (46%), Gaps = 26/262 (9%)
Query: 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176
G ++ + +L L P +LLP+ +P Y AR L R F L+P + E L L+
Sbjct: 95 GSQEGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASL--RTF-LIPLR--EDGLADLK 149
Query: 177 ALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGST 232
A+ + +++ P NP G V + ++ ARK G+ +I D Y D + G
Sbjct: 150 AVPEGVWREAKVLLLNYPNNPTGAVADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEA 209
Query: 233 PYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS 292
P + + G+ V+ L S+SK + + G+RLG+ + S+ + L ++ +KG ++ +
Sbjct: 210 P-SPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE-----EALARLERVKGVIDFNQ 263
Query: 293 GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352
G + K KE + R+ A + +K + + PR +M++
Sbjct: 264 YAGVLRMGV--EALKTPKE-VVRGYARVYRERALGMAEALKGVLSLLPPR---ATMYLWG 317
Query: 353 KLNLSLLEGISDDMEFALQLAK 374
+L EG+ DD+EF L+L +
Sbjct: 318 RLP----EGV-DDLEFGLRLVE 334
>pdb|2O1B|A Chain A, Structure Of Aminotransferase From Staphylococcus Aureus
Length = 404
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/325 (21%), Positives = 137/325 (42%), Gaps = 25/325 (7%)
Query: 92 RRAIADYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
++AI D+ + L +D V + G K + + T + PG +LLP PG+ Y A
Sbjct: 91 KQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGV 150
Query: 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
+ +L P + D +++ + T + + P NP G+ T + + K
Sbjct: 151 LLADGKPVPLNLEPPH-YLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAK 209
Query: 211 ARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
+ ++ D Y F + P + G V I + S+SK + G+R+G+ V +
Sbjct: 210 FKGTDTKIVHDFAYGAFGFDAKNPSILASENGKDV-AIEIYSLSKGYNXSGFRVGFAVGN 268
Query: 270 DPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329
+Q L+ K + ++G +Q A N +DF + ++ + D
Sbjct: 269 --KDXIQALK-----KYQTHTNAGXFGALQDAAIYAL-NHYDDFLEEQSNVFKTRRDRFE 320
Query: 330 DRI--KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387
+ ++P + +G ++V ++ D +F L +E+S++V PG G
Sbjct: 321 AXLAKADLPFVHA----KGGIYVWLETPPGY-----DSEQFEQFLVQEKSILVAPGKPFG 371
Query: 388 MKN--WLRITFAIEPSALEEGLGRI 410
++RI+ A++ L+E R+
Sbjct: 372 ENGNRYVRISLALDDQKLDEAAIRL 396
>pdb|1LKC|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From Salmonella Enterica
pdb|1LC5|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica In Its Apo State
pdb|1LC7|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With A
Substrate
pdb|1LC8|A Chain A, Crystal Structure Of L-Threonine-O-3-Phosphate
Decarboxylase From S. Enterica Complexed With Its
Reaction Intermediate
Length = 364
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 3/139 (2%)
Query: 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
PGF Y + EIR + L GW++ LEAL + + + P NP G +
Sbjct: 106 PGFAEYGRALAQSGCEIRRWSLREADGWQLTDAILEALT-PDLDCLFLCTPNNPTGLLPE 164
Query: 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260
LQ IA++ + L I +I DE + T ++ + L S++K + +PG
Sbjct: 165 RPLLQAIADRCKSLNINLILDEAFIDFIPHETGFI--PALKDNPHIWVLRSLTKFYAIPG 222
Query: 261 WRLGWLVTSDPSGILQELR 279
RLG+LV SD + + + R
Sbjct: 223 LRLGYLVNSDDAAMARMRR 241
>pdb|3L8A|A Chain A, Crystal Structure Of Metc From Streptococcus Mutans
pdb|3L8A|B Chain B, Crystal Structure Of Metc From Streptococcus Mutans
Length = 421
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 75/329 (22%), Positives = 139/329 (42%), Gaps = 27/329 (8%)
Query: 93 RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
+A+ D+ E + +D+ G AI + L + G +L+ P +Y AR
Sbjct: 103 QAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSP---VYYPFART 159
Query: 153 TRLE----IRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKI 207
RL + + + +E+D + LE + D N ++ +P NP G V+ L KI
Sbjct: 160 IRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKI 219
Query: 208 AEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGW 265
AE +K G++++SDE++ L FG+T + + S I L S +K + + G + +
Sbjct: 220 AELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSF 279
Query: 266 LVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325
+ + S LR + N T A F+ K + ++ ++
Sbjct: 280 AIIQNES-----LRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKP-WLEELKTVIEGNI 333
Query: 326 DICYDRIKEIPCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383
+ IKE+ T + +PEG+ V + + + + + +L E V++ G
Sbjct: 334 KLV---IKELEAKTKIKVMEPEGTYLVWLDFSAYAIA----QPQLSEKLQNEAKVVLNDG 386
Query: 384 MAVGM--KNWLRITFAIEPSALEEGLGRI 410
G K + R+ A + ++E L RI
Sbjct: 387 AHFGKEGKYFARLNVATPKNTVQEALSRI 415
>pdb|3FFH|A Chain A, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262.
pdb|3FFH|B Chain B, The Crystal Structure Of Histidinol-phosphate
Aminotransferase From Listeria Innocua Clip11262
Length = 363
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 87/191 (45%), Gaps = 14/191 (7%)
Query: 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR 151
R+ +AD+ +L +++ TAG + I+++ VL N + P F Y NA
Sbjct: 73 RKEVADFY------QLEEEELIFTAGVDELIELLTRVLLDTTTNTVXATPTFVQYRQNAL 126
Query: 152 HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211
E+R LL + E DL+G DE T + I NP NP GN +Q ++
Sbjct: 127 IEGAEVREIPLLQDG--EHDLEGXLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRV 184
Query: 212 RKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
++V+ DE Y +++T P + + +I + SK + + R+G+ +
Sbjct: 185 PS-DVLVVLDEAYIEYVT--PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK 241
Query: 271 PSGILQELRIV 281
I+++L IV
Sbjct: 242 E--IIRQLNIV 250
>pdb|1IAX|A Chain A, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAX|B Chain B, Crystal Structure Of Acc Synthase Complexed With Plp
pdb|1IAY|A Chain A, Crystal Structure Of Acc Synthase Complexed With Cofactor
Plp And Inhibitor Avg
Length = 428
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 43/355 (12%)
Query: 87 GILPARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP 144
G+ R+AIA ++ + P+ V + G A + I+ LA PG L+P P +P
Sbjct: 84 GLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYP 143
Query: 145 LYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADENTV-------AMVIVNPGNPCG 196
+ + R T +++ +++ ++ A EN +++ NP NP G
Sbjct: 144 AFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKE-AYENAQKSNIKVKGLILTNPSNPLG 202
Query: 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG--------VFGSTVPVIT 248
L+ + + I ++ DE+Y F + +V + + + V
Sbjct: 203 TTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHI 262
Query: 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKN 308
+ S+SK +PG+R+G ++ S ++ R + S + +S+ F+ +
Sbjct: 263 VYSLSKDMGLPGFRVG-IIYSFNDDVVNCARKMSS---FGLVSTQTQYFLAAML------ 312
Query: 309 TKEDFFSKIVDILRDTADICYDRIK------EIPCITCPRKPEGSMFVMVKLNLSLLEGI 362
+ E F + + LR++A R K E+ I C + G +F + L L E
Sbjct: 313 SDEKF---VDNFLRESAMRLGKRHKHFTNGLEVVGIKCLKNNAG-LFCWMDLRPLLREST 368
Query: 363 SD-DMEFALQLAKEESVIVLPGMAVGMKN--WLRITFA-IEPSALEEGLGRIKAF 413
D +M + + + V PG + + W R+ FA ++ ++ L RI+ F
Sbjct: 369 FDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARIRRF 423
>pdb|3FDB|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Beta-Cystathionase (Aecd, Dip1736) From Corynebacterium
Diphtheriae At 1.99 A Resolution
Length = 377
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/343 (20%), Positives = 133/343 (38%), Gaps = 29/343 (8%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141
Y P +L +A A++ + P+ ++ + + + + + +++P P
Sbjct: 56 YQPDGSLL--SQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTP 113
Query: 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201
+P + T+ E + + ++L +E ++++ NP NP G VF
Sbjct: 114 AYPPFFHLLSATQRE----GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGXVFAP 169
Query: 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV-ITLGSMSKRWIVPG 260
+ L ++ + A + V+ DE++ L F V GV + V IT+ + S W + G
Sbjct: 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSXAWNIAG 229
Query: 261 WRLGWLVTSDPSGILQELRIVDSIK---GYLNISSGPATFVQGAVPQIFKNTKEDFFSKI 317
+ ++ S+PS ++ IK L + + A + G DF ++
Sbjct: 230 LKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGT----------DFLNQE 279
Query: 318 VDILRDTADICYDRI-KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376
V L++ D I K IP + + + + +EG EF ++ AK
Sbjct: 280 VAYLKNNHDFLLHEIPKRIPGAKI-TPXQATYLXWIDFRDTTIEG--SPSEFFIEKAK-- 334
Query: 377 SVIVLPGMAVGMK--NWLRITFAIEPSALEEGLGRIKAFCQRH 417
V G G + R+ FA LEE + R H
Sbjct: 335 -VAXNDGAWFGEDGTGFCRLNFATSREVLEEAIDRXAKAVSHH 376
>pdb|3T32|A Chain A, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
pdb|3T32|B Chain B, Crystal Structure Of A Putative C-S Lyase From Bacillus
Anthracis
Length = 383
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/323 (19%), Positives = 134/323 (41%), Gaps = 17/323 (5%)
Query: 95 IADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP-LYEANARHT 153
I ++ + + + + +AG A+ + + ++L+ P +P +E +
Sbjct: 68 ICNWTKKQYNWDIQKEWIVFSAGIVPALSTSIQAFTKENESVLVQPPIYPPFFEXVTTNN 127
Query: 154 RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213
R + +D + LE + ++ +P NP G V+ ++L K+ K
Sbjct: 128 RQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLXLLCSPHNPIGRVWKKEELTKLGSLCTK 187
Query: 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLGWLVTSDP 271
++V++DE++ + + + + IT + S + + G + ++ +
Sbjct: 188 YNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCXAPSXTFNIAGLQASIIIIPN- 246
Query: 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331
+ Q + +G+ ++ T Q A + D+ ++I + D A +
Sbjct: 247 EKLRQAFTSIQYRQGFHGLNIFAYTAXQSAYTEC-----NDWLNEIRFYIEDNAKFACEY 301
Query: 332 IKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-- 388
IK+ IP ++ KPEGS + + + S L +S D L L ++ +IV PG G+
Sbjct: 302 IKDHIPTLSV-XKPEGSFLLWI--DCSAL-NLSQDERTKL-LEEKGKIIVEPGEKYGLGG 356
Query: 389 KNWLRITFAIEPSALEEGLGRIK 411
+ + I S LEE L R++
Sbjct: 357 EEHIGINIGCPRSVLEEILNRLR 379
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 79/201 (39%), Gaps = 20/201 (9%)
Query: 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
+ Y G P R AIA L + DDV+++ G K I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
P +P Y + +T ++ I + PE G+ DL + T +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
+P NP G T +QL ++ E A+K G +++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
+ S SK G RLGW V
Sbjct: 263 METASFSKYAGFTGVRLGWTV 283
>pdb|1C7N|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7N|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal 5'-Phosphate Cofactor
pdb|1C7O|A Chain A, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|B Chain B, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|C Chain C, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|D Chain D, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|E Chain E, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|F Chain F, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|G Chain G, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
pdb|1C7O|H Chain H, Crystal Structure Of Cystalysin From Treponema Denticola
Contains A Pyridoxal
5'-Phosphate-L-Aminoethoxyvinylglycine Complex
Length = 399
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 72/151 (47%), Gaps = 12/151 (7%)
Query: 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLYEANA 150
++ + ++ + D + TAG A+ + +PG +++ P +P + A
Sbjct: 72 KKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFFMAIK 131
Query: 151 RHTRLEIRHFDLLPEKGW-EVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIA 208
R +I +LL + G+ +D LE L+ D+N A++ +P NP G V+ +LQKI
Sbjct: 132 NQER-KIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIK 190
Query: 209 EKARKLGIMVISDEV--------YDHLTFGS 231
+ K +M+ SDE+ Y+H F S
Sbjct: 191 DIVLKSDLMLWSDEIHFDLIMPGYEHTVFQS 221
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 79/201 (39%), Gaps = 20/201 (9%)
Query: 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
+ Y G P R AIA L + DDV+++ G K I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
P +P Y + +T ++ I + PE G+ DL + T +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
+P NP G T +QL ++ E A+K G +++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
+ S S+ G RLGW V
Sbjct: 263 METASFSQYAGFTGVRLGWTV 283
>pdb|3JTX|A Chain A, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
pdb|3JTX|B Chain B, Crystal Structure Of Aminotransferase (np_283882.1) From
Neisseria Meningitidis Z2491 At 1.91 A Resolution
Length = 396
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/329 (20%), Positives = 137/329 (41%), Gaps = 53/329 (16%)
Query: 78 EFDCYSPSVGILPARRAIADYLNSELPCKL--SPDDVYLTAGCKQAIQVILTVLARPGAN 135
E + Y + G+ R+A A++L + +++ G ++A+ + + P ++
Sbjct: 58 ELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSD 117
Query: 136 -----ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190
I+ P P + +YE EI HF P + D + + T + + +
Sbjct: 118 GIKPAIVSPNPFYQIYEGATLLGGGEI-HFANCPAPSFNPDWRSISEEVWKRTKLVFVCS 176
Query: 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF-GSTPY------VRMGVFGST 243
P NP G+V +++ + K G ++ SDE Y + F G+ P ++G S
Sbjct: 177 PNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLG--RSR 234
Query: 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAV- 302
++ S+S R VPG R G++ + +L+ + + G S + VQ A
Sbjct: 235 QKLLXFTSLSXRSNVPGLRSGFVAGD--AELLKNFLLYRTYHG-----SAXSIPVQRASI 287
Query: 303 ------PQIFKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKL 354
+ N + ++ F +++ IL+ D+ + P+ S ++ +K+
Sbjct: 288 AAWDDEQHVIDNRRLYQEKFERVIPILQQVFDV--------------KLPDASFYIWLKV 333
Query: 355 NLSLLEGISDDMEFALQLAKEESVIVLPG 383
DD+ FA L ++ ++ VLPG
Sbjct: 334 P------DGDDLAFARNLWQKAAIQVLPG 356
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 78/201 (38%), Gaps = 20/201 (9%)
Query: 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
+ Y G P R AIA L + DDV+++ G K I L V+ I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVMFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
P +P Y + +T ++ I + PE G+ DL + T +
Sbjct: 148 QDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
+P NP G T +QL ++ E A+K G +++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
+ S S G RLGW V
Sbjct: 263 METASFSNYAGFTGVRLGWTV 283
>pdb|2Z20|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
pdb|2Z20|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana
Length = 432
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 77/201 (38%), Gaps = 20/201 (9%)
Query: 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
+ Y G P R AIA L + DDV+++ G K I L V I +
Sbjct: 91 YSGYGAEQGAKPLRAAIAKTFYGGL--GIGDDDVFVSDGAKCDISR-LQVXFGSNVTIAV 147
Query: 139 PKPGFPLY--------EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAM 186
P +P Y + +T ++ I + PE G+ DL + T +
Sbjct: 148 QDPSYPAYVDSSVIXGQTGQFNTDVQKYGNIEYXRCTPENGFFPDLSTVG-----RTDII 202
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246
+P NP G T +QL ++ E A+K G +++ D Y P + G+
Sbjct: 203 FFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAXYXSDDNPRSIFEIPGAEEVA 262
Query: 247 ITLGSMSKRWIVPGWRLGWLV 267
S SK G RLGW V
Sbjct: 263 XETASFSKYAGFTGVRLGWTV 283
>pdb|3EZS|A Chain A, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
pdb|3EZS|B Chain B, Crystal Structure Of Aminotransferase Aspb (Np_207418.1)
From Helicobacter Pylori 26695 At 2.19 A Resolution
Length = 376
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 68/345 (19%), Positives = 133/345 (38%), Gaps = 51/345 (14%)
Query: 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAI----QVILTVLARPGANILLPKPGFPLYE 147
R A + +L +++ T G ++ + +L P I P P + +YE
Sbjct: 65 RAAQRGFFKRRFKIELKENELISTLGSREVLFNFPSFVLFDYQNP--TIAYPNPFYQIYE 122
Query: 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN-PGNPCGNVFTYQQLQK 206
A+ + + L E + L+ E V +VI+N P NP G + ++L
Sbjct: 123 GAAKFIKAKSLLXPLTKENDFTPSLNEKEL----QEVDLVILNSPNNPTGRTLSLEELIS 178
Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTP-----YVRMGVFGSTVPVITLGSMSKRWIVPGW 261
+ A K ++I+DE Y + + P + + V+ + S+SKR PG
Sbjct: 179 WVKLALKHDFILINDECYSEIYENTPPPSLLEACXLAGNEAFKNVLVIHSLSKRSSAPGL 238
Query: 262 RLGWLVTSDPSGILQELRIVDSIKGYLNIS----SGPATFVQGAVPQIFKNTKEDFFSKI 317
R G++ S +L++ + + GY + + + A ++ + F+N +
Sbjct: 239 RSGFIAGD--SRLLEKYKAFRAYLGYTSANAIQKASEAAWLDDRHAEFFRNIYANNLKLA 296
Query: 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES 377
I ++T Y +P + + FA L + E
Sbjct: 297 RKIFKNTLIYPYSFYVYLP-------------------------VQNGENFAKTLYQNEG 331
Query: 378 VIVLPGMAVGMK----NWLRITFAIEPSALEEGLGRIKAFCQRHA 418
+I LP + +G +++R+ + LE+ L I+ + + HA
Sbjct: 332 IITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIETYRENHA 376
>pdb|3DZZ|A Chain A, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
pdb|3DZZ|B Chain B, Crystal Structure Of A Putative Plp-Dependent
Aminotransferase (Lbul_1103) From Lactobacillus
Delbrueckii Subsp. At 1.61 A Resolution
Length = 391
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 11/168 (6%)
Query: 93 RAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH 152
+A+AD+ E + D +G AI + PG IL+ +P + + +
Sbjct: 69 KAVADWEEIEHRARPKEDWCVFASGVVPAISAXVRQFTSPGDQILVQEPVYNXFYSVIEG 128
Query: 153 TRLEIRHFDLLPEKG-WEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210
+ DL+ E + V+ LE LA + V NP NP G ++ +++++IAE
Sbjct: 129 NGRRVISSDLIYENSKYSVNWADLEEKLATPSVRXXVFCNPHNPIGYAWSEEEVKRIAEL 188
Query: 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258
K +++ISDE++ L P T+ +K W+V
Sbjct: 189 CAKHQVLLISDEIHGDLVLTDE---------DITPAFTVDWDAKNWVV 227
>pdb|1GEW|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Pyridoxal 5'-Phosphate
pdb|1GEX|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With Histidinol-Phosphate
pdb|1GEY|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
Complexed With N-(5'-Phosphopyridoxyl)-L-Glutamate
pdb|1IJI|A Chain A, Crystal Structure Of L-histidinol Phosphate
Aminotransferase With Plp
Length = 356
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 76/166 (45%), Gaps = 10/166 (6%)
Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
+ P+ V ++ G + I++++ PG + IL P + +Y +A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL-- 130
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
W++DL G+ D V V +P NP G + Q + + E R I V++DE Y
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYV-CSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 226 HLTFGSTPYVRMGVFGSTVPVIT-LGSMSKRWIVPGWRLGWLVTSD 270
P + + + P + L ++SK + + G R G+ + ++
Sbjct: 189 EF----CPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|1D2F|A Chain A, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
pdb|1D2F|B Chain B, X-Ray Structure Of Maly From Escherichia Coli: A
Pyridoxal-5'- Phosphate-Dependent Enzyme Acting As A
Modulator In Mal Gene Expression
Length = 390
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 142/336 (42%), Gaps = 39/336 (11%)
Query: 94 AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHT 153
AIA + +++ + V + ++ + G +++ P + +A +
Sbjct: 72 AIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAY-----DAFYK 126
Query: 154 RLEIRHFDLLP---EK---GWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQK 206
+E ++P EK GW D+ LEA LA M++ +P NP G V+T +L+
Sbjct: 127 AIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEI 186
Query: 207 IAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265
+A+ + G+ VISDE++ + +G P++ V ++T G SK + +P +
Sbjct: 187 MADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWALLTSG--SKSFNIPALTGAY 244
Query: 266 LVTSDPS---GILQELRIVDSIK--GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320
+ + S L L+ D + L +++ A + QGA + +
Sbjct: 245 GIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGA----------PWLDALRIY 294
Query: 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN-LSLLEGISDDMEFALQLAKEESVI 379
L+D D++ + P+ + + L L++ DD L ++E V
Sbjct: 295 LKDNLTYIADKMNAAFPELNWQIPQSTYLAWLDLRPLNI-----DDNALQKALIEQEKVA 349
Query: 380 VLPGMAVGM--KNWLRITFAIEPSALEEGL-GRIKA 412
++PG G + ++R+ S LE+G+ G I A
Sbjct: 350 IMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINA 385
>pdb|3NRA|A Chain A, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
pdb|3NRA|B Chain B, Crystal Structure Of An Aspartate Aminotransferase
(Yp_354942.1) From Rhodobacter Sphaeroides 2.4.1 At 2.15
A Resolution
Length = 407
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 92/231 (39%), Gaps = 17/231 (7%)
Query: 44 RPIIPLGHGDPSAFPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARRAIADYLNSEL 103
RP+ HGD A TP +S Y+ G L R +A L +
Sbjct: 40 RPV-DFSHGDVDAH---EPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFT 95
Query: 104 PCKL-SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-------PLYEANARHTRL 155
+ + D + +T G + A+ + + G + + +P + +E +L
Sbjct: 96 GAPVDARDGLIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEXVPVQL 155
Query: 156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215
+ D E +DL GLE + NP NP G V++ +++ +IA A + G
Sbjct: 156 DYVSAD---ETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVYSAEEIGQIAALAARYG 212
Query: 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVP--VITLGSMSKRWIVPGWRLG 264
VI+D++Y L + Y + + V+T+ S + G+RLG
Sbjct: 213 ATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIXGPSXTESLSGYRLG 263
>pdb|1FG3|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase Complexed With L-Histidinol
pdb|1FG7|A Chain A, Crystal Structure Of L-Histidinol Phosphate
Aminotransferase With Pyridoxal-5'-Phosphate
Length = 356
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 75/166 (45%), Gaps = 10/166 (6%)
Query: 107 LSPDDVYLTAGCKQAIQVILTVLARPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPE 165
+ P+ V ++ G + I++++ PG + IL P + Y +A +E R L
Sbjct: 73 VKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGXYSVSAETIGVECRTVPTL-- 130
Query: 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225
W++DL G+ D V V +P NP G + Q + + E R I V++DE Y
Sbjct: 131 DNWQLDLQGISDKLDGVKVVYV-CSPNNPTGQLINPQDFRTLLELTRGKAI-VVADEAYI 188
Query: 226 HLTFGSTPYVRMGVFGSTVPVIT-LGSMSKRWIVPGWRLGWLVTSD 270
P + + + P + L ++SK + + G R G+ + ++
Sbjct: 189 EF----CPQASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE 230
>pdb|3EUC|A Chain A, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
pdb|3EUC|B Chain B, Crystal Structure Of Histidinol-Phosphate Aminotransferase
(Yp_297314.1) From Ralstonia Eutropha Jmp134 At 2.05 A
Resolution
Length = 367
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 82/187 (43%), Gaps = 21/187 (11%)
Query: 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
+V L G + I + ARPGA + P PGF Y +A+ LE F +P + +
Sbjct: 87 EVLLGNGSDEIISXLALAAARPGAKVXAPVPGFVXYAXSAQFAGLE---FVGVPLRA-DF 142
Query: 171 DLD---GLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYD 225
LD L A A+ + + P NP GN+F + I A+ +V+ DE Y
Sbjct: 143 TLDRGAXLAAXAEHQPAIVYLAYPNNPTGNLFDAADXEAIVRAAQGSVCRSLVVVDEAYQ 202
Query: 226 HLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284
F + R+ FG+ + T+ + + G RLG+ V DP Q L +D +
Sbjct: 203 --PFAQESWXSRLTDFGNLLVXRTVSKLG----LAGIRLGY-VAGDP----QWLEQLDKV 251
Query: 285 KGYLNIS 291
+ N++
Sbjct: 252 RPPYNVN 258
>pdb|3G7Q|A Chain A, Crystal Structure Of Valine-Pyruvate Aminotransferase Avta
(Np_462565.1) From Salmonella Typhimurium Lt2 At 1.80 A
Resolution
Length = 417
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 96/419 (22%), Positives = 170/419 (40%), Gaps = 62/419 (14%)
Query: 25 LTVRSALTIIKQNLKENDPRP-IIPLGHGDPSAFPC----FRTTPXXXXXXXXXXRSAEF 79
T S +T + ++L + P I LG G+P+ P F+T ++A+
Sbjct: 11 FTRHSGITRLXEDLNDGLRTPGAIXLGGGNPAHIPAXQDYFQT---LLTDXVESGKAADA 67
Query: 80 DC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138
C Y G A+A L L + P ++ LT G + A + + A A+
Sbjct: 68 LCNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGST 127
Query: 139 PKPGFPL------YEANARHTRLEIR---HFDLLPEKGWEVDLDGLEALADENTVAMVIV 189
K FPL Y + L + + +LLPE ++ +D E T + +
Sbjct: 128 KKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKYHVDFEHLHIGEETGXICVS 187
Query: 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP---- 245
P NP GNV T ++L K+ A + I ++ D Y P+ + +F P
Sbjct: 188 RPTNPTGNVITDEELXKLDRLANQHNIPLVIDNAY------GVPFPGI-IFSEARPLWNP 240
Query: 246 -VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQ-- 299
+I S+SK + PG R G ++ +D + + + + G ++++ GPA +
Sbjct: 241 NIILCXSLSKLGL-PGSRCGIIIAND-----KTITAIANXNGIISLAPGGXGPAXXCEXI 294
Query: 300 --GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357
+ ++ + + F+ + V + T I + E C+ KPEG++F+ +
Sbjct: 295 KRNDLLRLSETVIKPFYYQRV---QQTIAIIRRYLSEERCLI--HKPEGAIFLWL----- 344
Query: 358 LLEGISDDMEFALQLAKEESVIVLPGMAV--GM-KNW------LRITFAIEPSALEEGL 407
+ + E Q K V+ +PG G+ K W R + EP +E G+
Sbjct: 345 WFKDLPITTELLYQRLKARGVLXVPGHYFFPGLDKPWPHTHQCXRXNYVPEPDKIEAGV 403
>pdb|3CQ4|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
pdb|3CQ4|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum
Length = 376
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 76 SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
+ E + Y P + R +A Y+ + ++ D+++ G + +Q +L PG
Sbjct: 57 ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 115
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
L +P + ++ A+ T E + +G + +D+D LE + + + + P
Sbjct: 116 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 171
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G+V + +++I A + VI DE Y F +P + ++ +M
Sbjct: 172 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 226
Query: 253 SKRWIVPGWRLGWLVTS 269
SK + G RLG+ V +
Sbjct: 227 SKAFDFAGGRLGYFVAN 243
>pdb|3CQ5|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|B Chain B, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
pdb|3CQ5|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum In Complex With Pmp
Length = 369
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/197 (22%), Positives = 86/197 (43%), Gaps = 13/197 (6%)
Query: 76 SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
+ E + Y P + R +A Y+ + ++ D+++ G + +Q +L PG
Sbjct: 60 ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
L +P + ++ A+ T E + +G + +D+D LE + + + + P
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 174
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G+V + +++I A + VI DE Y F +P + ++ +M
Sbjct: 175 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 229
Query: 253 SKRWIVPGWRLGWLVTS 269
SK + G RLG+ V +
Sbjct: 230 SKAFDFAGGRLGYFVAN 246
>pdb|3ASA|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
pdb|3ASB|A Chain A, Crystal Structure Of Plp-Bound Ll-Diaminopimelate
Aminotransferase From Chlamydia Trachomatis
Length = 400
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 85/206 (41%), Gaps = 23/206 (11%)
Query: 82 YSPSVGILPARRAIA-DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140
Y P G+ R+ ++ D+ + K +++++ G K + +L+ P + +
Sbjct: 71 YGPDFGLPALRQKLSEDFYRGFVDAK----EIFISDGAKVDLFRLLSFFG-PNQTVAIQD 125
Query: 141 PGFPLYEANARHTRL-EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
P +P Y AR T EI L E + + D + + + +P NP G V
Sbjct: 126 PSYPAYLDIARLTGAKEIIALPCLQENAFFPEFP-----EDTHIDILCLCSPNNPTGTVL 180
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRW 256
QL+ I A + I+++ D Y TF S P + +F + I + S SK
Sbjct: 181 NKDQLRAIVHYAIEHEILILFDAAYS--TFISDPSLPKSIFEIPDARFCAIEINSFSKPL 238
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVD 282
G RLGW V I QEL D
Sbjct: 239 GFAGIRLGWTV------IPQELTYAD 258
>pdb|3F6T|A Chain A, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
pdb|3F6T|B Chain B, Crystal Structure Of Aspartate Aminotransferase (E.C.
2.6.1.1) (Yp_194538.1) From Lactobacillus Acidophilus
Ncfm At 2.15 A Resolution
Length = 533
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 82/209 (39%), Gaps = 28/209 (13%)
Query: 95 IADYLNSELPCK----LSPDDVYLTAGCKQAIQVILTVLA-----RPGANILLPKPGFPL 145
I +Y EL K D++ T G AI LA + G I + +P F
Sbjct: 146 IINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTP 205
Query: 146 YEANARHTRLEIRHFDL--LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
Y E+ DL + WE++ + +E L D + A+++VNP NP F
Sbjct: 206 YLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNA 265
Query: 204 LQKIAEKARKL-GIMVISDEVYDHLT------FGSTPYVRMGVFGSTVPVITLGSMSKRW 256
L I + K + +ISDEVY + PY V+ S S +
Sbjct: 266 LNAIKQAVEKNPKLXIISDEVYGAFVPNFKSIYSVVPYNTXLVY----------SYSXLF 315
Query: 257 IVPGWRLGWLVTSDPSGILQELRIVDSIK 285
GWRLG + ++ + + +D ++
Sbjct: 316 GCTGWRLGVIALNEKNVFDDNIAHLDKVE 344
>pdb|3CQ6|A Chain A, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|C Chain C, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
pdb|3CQ6|E Chain E, Histidinol-Phosphate Aminotransferase From Corynebacterium
Glutamicum Holo-Form (Plp Covalently Bound )
Length = 369
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 85/197 (43%), Gaps = 13/197 (6%)
Query: 76 SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135
+ E + Y P + R +A Y+ + ++ D+++ G + +Q +L PG
Sbjct: 60 ATELNRY-PERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRT 118
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--WEVDLD-GLEALADENTVAMVIVNPG 192
L +P + ++ A+ T E + +G + +D+D LE + + + + P
Sbjct: 119 ALGFQPSYSMHPILAKGTHTEF----IAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPN 174
Query: 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252
NP G+V + +++I A + VI DE Y F +P + ++ +M
Sbjct: 175 NPTGDVTSLDDVERIINVAPGI---VIVDEAYAE--FSPSPSATTLLEKYPTKLVVSRTM 229
Query: 253 SKRWIVPGWRLGWLVTS 269
S + G RLG+ V +
Sbjct: 230 SXAFDFAGGRLGYFVAN 246
>pdb|3FTB|A Chain A, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|B Chain B, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|D Chain D, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
pdb|3FTB|E Chain E, The Crystal Structure Of The Histidinol-Phosphate
Aminotransferase From Clostridium Acetobutylicum
Length = 361
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/187 (22%), Positives = 86/187 (45%), Gaps = 14/187 (7%)
Query: 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF 143
P V ++I +YL KL + L G + I++ +++ + IL+ P +
Sbjct: 59 PDVNYRRLNKSIENYL------KLKDIGIVLGNGASEIIELSISLFEK----ILIIVPSY 108
Query: 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203
YE NA+ + + F L E +D + + + D+ +++I NP NP G + ++
Sbjct: 109 AEYEINAKKHGVSVV-FSYLDENMC-IDYEDIISKIDD-VDSVIIGNPNNPNGGLINKEK 165
Query: 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263
+ + A + +I DE + T G +G + + + +M+K + +PG R
Sbjct: 166 FIHVLKLAEEKKKTIIIDEAFIEFT-GDPSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRF 224
Query: 264 GWLVTSD 270
G+ +T++
Sbjct: 225 GYGITNN 231
>pdb|4FL0|A Chain A, Crystal Structure Of Ald1 From Arabidopsis Thaliana
pdb|4FL0|B Chain B, Crystal Structure Of Ald1 From Arabidopsis Thaliana
Length = 456
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 32/255 (12%)
Query: 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----- 146
R+AIA+ +L K ++V+++ G + I L +L I + P FP Y
Sbjct: 118 RKAIAETFYRDLHVK--SNEVFVSDGAQSDISR-LQLLLGSNVTIAVQDPTFPAYIDSSV 174
Query: 147 ---EANARHTRLE----IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199
+ H + + + + P + DL A+ V + +P NP G V
Sbjct: 175 IIGQTGHFHEKTKKYQNVVYMPCGPNNSFFPDL----AMTPRTDV-IFFCSPNNPTGYVA 229
Query: 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
+ +QL ++ + A+ G ++I D Y +P + G+ I + S SK
Sbjct: 230 SRKQLHQLVDFAKTNGSIIIFDSAYAAFIEDGSPRSIYEIPGAREVAIEVSSFSKFAGFT 289
Query: 260 GWRLGW------LVTSDPSGILQELR--IVDSIKGYLNI--SSGPATFVQGAVPQIFKNT 309
G RLGW L+ S+ I+ + + S G NI + G A G + +I +
Sbjct: 290 GVRLGWSIIPDELLYSNGFPIINDFHRIVTTSFNGASNIAQAGGLACLSSGGLKEI--RS 347
Query: 310 KEDFFSKIVDILRDT 324
+++ + IL DT
Sbjct: 348 VNNYYKENRKILMDT 362
>pdb|2X5F|A Chain A, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
pdb|2X5F|B Chain B, Crystal Structure Of The Methicillin-Resistant
Staphylococcus Aureus Sar2028, An
Aspartate_tyrosine_phenylalanine Pyridoxal-5'-Phosphate
Dependent Aminotransferase
Length = 430
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 82 YSPSVGILPARRAIADYLNSELPCKLSPDDV---YLTAGCKQAIQVILTVLARPGANILL 138
Y+P GI R + + P +LS D++ +T + ++ + ILL
Sbjct: 84 YAPPQGIEELRDLWQQKMLRDNP-ELSIDNMSRPIVTNALTHGLSLVGDLFVNQDDTILL 142
Query: 139 PKPGFPLYEA--NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT--VAMVIVNPGNP 194
P+ + Y+ N R+ ++ + + + G +EAL N V M++ P NP
Sbjct: 143 PEHNWGNYKLVFNTRNGA-NLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPNNP 201
Query: 195 CGNVFTYQQLQKIAEKARKLG-----IMVISDEVYDHLTFGSTPYVR------MGVFGST 243
G T++++ I E + L ++ + D+ Y L F Y + + +
Sbjct: 202 TGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGL-FYEDVYTQSLFTALTNLHSNA 260
Query: 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGA 301
+ I L +K + G+R+G++ +E+ + +KG + NISSGP Q A
Sbjct: 261 ILPIRLDGATKEFFAWGFRVGFMTFGTSDQTTKEV-LEAKVKGLIRSNISSGPLP-TQSA 318
Query: 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335
V + KN K+ F K ++ T Y+ KE+
Sbjct: 319 VKHVLKNNKQ--FDKEIEQNIQTLKERYEVTKEV 350
>pdb|3IF2|A Chain A, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
pdb|3IF2|B Chain B, Crystal Structure Of Putative Amino-Acid Aminotransferase
(Yp_265399.1) From Psychrobacter Arcticum 273-4 At 2.50
A Resolution
Length = 444
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 27/158 (17%)
Query: 94 AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN--------------ILLP 139
A+ + N L+ +++ LT G + A + + N ILLP
Sbjct: 91 ALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLP 150
Query: 140 KP----GFPLYEANARHTRLEIRHFDLLPEKG------WEVDLDGLE---ALADENTVAM 186
G+ +H + H D + G + VD + LE AL + A+
Sbjct: 151 LTPEYIGYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAI 210
Query: 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224
P NP GNV T ++ +AE A++ I +I D Y
Sbjct: 211 CCSRPTNPTGNVLTDEEXAHLAEIAKRYDIPLIIDNAY 248
>pdb|3G0T|A Chain A, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
pdb|3G0T|B Chain B, Crystal Structure Of Putative Aspartate Aminotransferase
(Np_905498.1) From Porphyromonas Gingivalis W83 At 1.75
A Resolution
Length = 437
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 60/165 (36%), Gaps = 10/165 (6%)
Query: 115 TAGCKQAIQVILTVLARPGAN----ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170
T G Q V V R N L PGF L + R + FDL +G ++
Sbjct: 111 TVGSXQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLFEYRGEKL 170
Query: 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG 230
L +++ NP NP T ++L+ I E A K ++VI D Y F
Sbjct: 171 REKLESYLQTGQFCSIIYSNPNNPTWQCXTDEELRIIGELATKHDVIVIEDLAYFGXDFR 230
Query: 231 ------STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269
P + V T I S S + G R+G L S
Sbjct: 231 KDYSHPGEPLYQPSVANYTDNYILALSSSXAFSYAGQRIGVLXIS 275
>pdb|2F8J|A Chain A, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|B Chain B, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|C Chain C, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
pdb|2F8J|D Chain D, Crystal Structure Of Histidinol-phosphate Aminotransferase
(ec 2.6.1.9) (imidazole Acetol-phosphate Transferase)
(tm1040) From Thermotoga Maritima At 2.40 A Resolution
Length = 347
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 95 IADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR 154
I YL+++ LS ++V + G + I V++ + R ++ P P + Y A+
Sbjct: 77 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAKAVG 129
Query: 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214
+ L DL E E V I NP NP G+VF +++++I K
Sbjct: 130 AKFLEVPLTK------DLRIPEVNVGEGDVVF-IPNPNNPTGHVFEREEIERIL----KT 178
Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
G V DE Y F YV + VI + SK + + R+G++V S+
Sbjct: 179 GAFVALDEAY--YEFHGESYVDFLKKYENLAVIR--TFSKAFSLAAQRVGYVVASE 230
>pdb|1UU1|A Chain A, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|B Chain B, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|C Chain C, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU1|D Chain D, Complex Of Histidinol-Phosphate Aminotransferase (Hisc)
From Thermotoga Maritima (Apo-Form)
pdb|1UU2|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU2|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
pdb|1UU0|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima (Apo-Form)
Length = 335
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 75/176 (42%), Gaps = 22/176 (12%)
Query: 95 IADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTR 154
I YL+++ LS ++V + G + I V++ + R ++ P P + Y A+
Sbjct: 65 ILSYLDTDF---LSKNNVSVGNGADEIIYVMMLMFDR---SVFFP-PTYSCYRIFAKAVG 117
Query: 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214
+ L DL E E V I NP NP G+VF +++++I K
Sbjct: 118 AKFLEVPLTK------DLRIPEVNVGEGDVVF-IPNPNNPTGHVFEREEIERIL----KT 166
Query: 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270
G V DE Y F YV + VI + SK + + R+G++V S+
Sbjct: 167 GAFVALDEAY--YEFHGESYVDFLKKYENLAVIR--TFSKAFSLAAQRVGYVVASE 218
>pdb|3QGU|A Chain A, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
pdb|3QGU|B Chain B, L,L-Diaminopimelate Aminotransferase From Chalmydomonas
Reinhardtii
Length = 449
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 94/246 (38%), Gaps = 23/246 (9%)
Query: 35 KQNLKENDPRPIIPLGHGDPSA-FPCFRTTPXXXXXXXXXXRSAEFDCYSPSVGILPARR 93
K + ++N II LG GD + P + R + Y G R
Sbjct: 60 KAHQEKNPDAKIISLGIGDTTEPLPKYIADAMAKAAAGLATREG-YSGYGAEQGQGALRE 118
Query: 94 AIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLYEANARH 152
A+A + D+++++ G K I I + ++P + + P +P+Y +
Sbjct: 119 AVASTFYGH--AGRAADEIFISDGSKCDIARIQMMFGSKP--TVAVQDPSYPVYVDTSVM 174
Query: 153 TRLEIRH----FDLL------PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202
+ H FD + P+ + DL + T + +P NP G T
Sbjct: 175 MGMTGDHNGTGFDGIEYMVCNPDNHFFPDLS-----KAKRTDIIFFCSPNNPTGAAATRA 229
Query: 203 QLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261
QL ++ ARK G +++ D Y +++ P + G+ I S SK G
Sbjct: 230 QLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKYAGFTGV 289
Query: 262 RLGWLV 267
RLGW V
Sbjct: 290 RLGWTV 295
>pdb|1H1C|A Chain A, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|B Chain B, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|C Chain C, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
pdb|1H1C|D Chain D, Histidinol-Phosphate Aminotransferase (Hisc) From
Thermotoga Maritima
Length = 335
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245
+ I NP NP G+VF +++++I K G V DE Y F YV +
Sbjct: 142 VFIPNPNNPTGHVFEREEIERIL----KTGAFVALDEAY--YEFHGESYVDFLKKYENLA 195
Query: 246 VITLGSMSKRWIVPGWRLGWLVTSD 270
VI + SK + + R+G++V S+
Sbjct: 196 VIR--TFSKAFSLAAQRVGYVVASE 218
>pdb|3P1T|A Chain A, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|B Chain B, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|C Chain C, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
pdb|3P1T|D Chain D, Crystal Structure Of A Putative Aminotransferase
(Bpsl1724) From Burkholderia Pseudomallei K96243 At 2.60
A Resolution
Length = 337
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
PGF Y A R +RHF++ +D + L ++ ++ V V+ NP NP G +
Sbjct: 98 PGFDGYRA--RIAVSGLRHFEIGLTDDLLLDPNDLAQVSRDDCV--VLANPSNPTGQALS 153
Query: 201 YQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259
+L ++ ++A KL I DE Y D+ +F R +G V S SK + +
Sbjct: 154 AGELDQLRQRAGKLLI----DETYVDYSSF----RARGLAYGENELVFR--SFSKSYGLA 203
Query: 260 GWRLGWL 266
G RLG L
Sbjct: 204 GLRLGAL 210
>pdb|2ZY2|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 544
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 45/105 (42%), Gaps = 10/105 (9%)
Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE--KARKLGIMVISD 221
P+ GW+ L+ L D + VNP NP + L ++ ++ +++++D
Sbjct: 226 PDNGWQYSDAELDKLKDPDVKIFFCVNPSNPPSVKMDQRSLDRVRAIVAEQRPDLLILTD 285
Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITL--GSMSKRWIVPGWRLG 264
+VY TF S P TL S SK + GWRLG
Sbjct: 286 DVYG--TFAD----EFQSLFSVCPRNTLLVYSFSKYFGATGWRLG 324
>pdb|1PG8|A Chain A, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|B Chain B, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|C Chain C, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
pdb|1PG8|D Chain D, Crystal Structure Of L-Methionine Alpha-, Gamma-Lyase
Length = 398
Score = 35.4 bits (80), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHT----RLEIRHFDLLPEKGWEVDLDGLE 176
AI L L RPG +LL + A H +++RH D+ DL LE
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236
A T + +P NP ++ + +A+ ARK G V+ D Y TPY++
Sbjct: 145 AAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY------CTPYLQ 195
>pdb|2CTZ|A Chain A, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
pdb|2CTZ|B Chain B, Crystal Structure Of O-Acetyl Homoserine Sulfhydrylase
From Thermus Thermophilus Hb8
Length = 421
Score = 35.4 bits (80), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 60/143 (41%), Gaps = 18/143 (12%)
Query: 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL----LPKPGFPLYEANARH 152
D L L TA A + LT LA+ G NI+ L F ++ +
Sbjct: 61 DVLEKRLAALEGGKAALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKR 120
Query: 153 TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
+E+R F E+ E AL DE T A + + GNP N+ L+ +A+ AR
Sbjct: 121 LGIEVR-FTSREERPEE-----FLALTDEKTRAWWVESIGNPALNI---PDLEALAQAAR 171
Query: 213 KLGIMVISDEVYDHLTFGSTPYV 235
+ G+ +I D TFG Y+
Sbjct: 172 EKGVALIVDN-----TFGMGGYL 189
>pdb|1GC0|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC0|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|A Chain A, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|B Chain B, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|C Chain C, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1GC2|D Chain D, Crystal Structure Of The Pyridoxal-5'-Phosphate Dependent
L- Methionine Gamma-Lyase From Pseudomonas Putida
pdb|1UKJ|A Chain A, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|B Chain B, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|C Chain C, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|1UKJ|D Chain D, Detailed Structure Of L-Methionine-Lyase From Pseudomonas
Putida
pdb|2O7C|A Chain A, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|B Chain B, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|C Chain C, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
pdb|2O7C|D Chain D, Crystal Structure Of L-Methionine-Lyase From Pseudomonas
Length = 398
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHT----RLEIRHFDLLPEKGWEVDLDGLE 176
AI L L RPG +LL + A H +++RH D+ DL LE
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236
A T + +P NP ++ + +A+ ARK G V+ D Y TPY++
Sbjct: 145 AAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY------CTPYLQ 195
>pdb|3MC6|A Chain A, Crystal Structure Of Scdpl1
Length = 497
Score = 35.0 bits (79), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195
I+ P ++ A + +++RH +L P ++VDL ++ ++NTV +V P P
Sbjct: 161 IIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFPH 219
Query: 196 GNVFTYQQLQKIAEKAR 212
G + L KIA+K +
Sbjct: 220 GIADDIEGLGKIAQKYK 236
>pdb|3MC6|C Chain C, Crystal Structure Of Scdpl1
Length = 497
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195
I+ P ++ A + +++RH +L P ++VDL ++ ++NTV +V P P
Sbjct: 161 IIAPVTAHAGFDKAAYYFGMKLRHVELDPTT-YQVDLGKVKKFINKNTVLLVGSAPNFPH 219
Query: 196 GNVFTYQQLQKIAEKAR 212
G + L KIA+K +
Sbjct: 220 GIADDIEGLGKIAQKYK 236
>pdb|3VK2|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK2|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant.
pdb|3VK3|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK3|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Methionine
pdb|3VK4|A Chain A, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|B Chain B, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|C Chain C, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
pdb|3VK4|D Chain D, Crystal Structure Of L-Methionine Gamma-Lyase From
Pseudomonas Putida C116h Mutant Complexed With
L-Homocysteine
Length = 398
Score = 35.0 bits (79), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 50/120 (41%), Gaps = 20/120 (16%)
Query: 121 AIQVILTVLARPGANILLPKPGFPLYEANARHT----RLEIRHFDLLPEKGWEVDLDGLE 176
AI L L RPG +LL + A H +++RH D+ DL LE
Sbjct: 92 AITSTLWTLLRPGDEVLLGNTLYGHTFAFLHHGIGEFGVKLRHVDM-------ADLQALE 144
Query: 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236
A T + +P NP ++ + +A+ ARK G V+ D Y TPY++
Sbjct: 145 AAMTPATRVIYFESPANPNMHM---ADIAGVAKIARKHGATVVVDNTY------CTPYLQ 195
>pdb|3LVJ|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVJ|B Chain B, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 1)
pdb|3LVK|A Chain A, Crystal Structure Of E.Coli Iscs-Tusa Complex (Form 2)
pdb|3LVL|B Chain B, Crystal Structure Of E.Coli Iscs-Iscu Complex
pdb|3LVM|A Chain A, Crystal Structure Of E.Coli Iscs
pdb|3LVM|B Chain B, Crystal Structure Of E.Coli Iscs
Length = 423
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 24/141 (17%)
Query: 91 ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
AR IAD + ++ P ++ T+G ++ LA GA K G + +
Sbjct: 73 ARNQIADLVGAD------PREIVFTSGATESDN-----LAIKGAANFYQKKGKHIITSKT 121
Query: 151 RHT-------RLEIRHFD---LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
H +LE F+ L P++ +DL LEA ++T+ + I++ N G V
Sbjct: 122 EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV-- 179
Query: 201 YQQLQKIAEKARKLGIMVISD 221
Q + I E R GI+ D
Sbjct: 180 -QDIAAIGEMCRARGIIYHVD 199
>pdb|1P3W|B Chain B, X-Ray Crystal Structure Of E. Coli Iscs
pdb|1P3W|A Chain A, X-Ray Crystal Structure Of E. Coli Iscs
Length = 404
Score = 35.0 bits (79), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 60/141 (42%), Gaps = 24/141 (17%)
Query: 91 ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA 150
AR IAD + ++ P ++ T+G ++ LA GA K G + +
Sbjct: 54 ARNQIADLVGAD------PREIVFTSGATESDN-----LAIKGAANFYQKKGKHIITSKT 102
Query: 151 RHT-------RLEIRHFD---LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200
H +LE F+ L P++ +DL LEA ++T+ + I++ N G V
Sbjct: 103 EHKAVLDTCRQLEREGFEVTYLAPQRNGIIDLKELEAAMRDDTILVSIMHVNNEIGVV-- 160
Query: 201 YQQLQKIAEKARKLGIMVISD 221
Q + I E R GI+ D
Sbjct: 161 -QDIAAIGEMCRARGIIYHVD 180
>pdb|2D66|A Chain A, Aspartate Aminotransferase Mutant Mab
pdb|2D7Z|A Chain A, Aspartate Aminotransferase Mutant Mab Complexed With
Maleic Acid
Length = 396
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + PG+P +++ LE+R + + +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 230 G 230
G
Sbjct: 220 G 220
>pdb|2D64|A Chain A, Aspartate Aminotransferase Mutant Mabc With Isovaleric
Acid
pdb|2D65|A Chain A, Aspartate Aminotransferase Mutant Mabc
Length = 396
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + PG+P +++ LE+R + + +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVKRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 230 G 230
G
Sbjct: 220 G 220
>pdb|1YOO|A Chain A, Aspartate Aminotransferase Mutant Atb17 With Isovaleric
Acid
Length = 396
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 53/121 (43%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + PG+P +++ LE+R + + +D
Sbjct: 100 TPGGTGALRVAADFLAKNTSVRRVWVSNPGWPTHKSVFNSAGLEVREYAYYDAENHTLDF 159
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 160 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFAR 219
Query: 230 G 230
G
Sbjct: 220 G 220
>pdb|4F5H|A Chain A, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3.
pdb|4F5H|B Chain B, Intercoversion Of Substrate Specificity: E. Coli Aspatate
Aminotransferase To Tyrosine Aminotransferase: Chimera
P3
Length = 406
Score = 32.7 bits (73), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + P +P ++A LE+R + + +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGR 229
Query: 230 G 230
G
Sbjct: 230 G 230
>pdb|3FDD|A Chain A, The Crystal Structure Of The Pseudomonas Dacunhae
Aspartate-Beta- Decarboxylase Reveals A Novel Oligomeric
Assembly For A Pyridoxal-5- Phosphate Dependent Enzyme
Length = 533
Score = 32.3 bits (72), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 42/105 (40%), Gaps = 10/105 (9%)
Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE--KARKLGIMVISD 221
P W+ L+ L D VNP NP + L+++ + + +M+++D
Sbjct: 227 PALNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDERSLERVRKIVAEHRPDLMILTD 286
Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITL--GSMSKRWIVPGWRLG 264
+VY G + P TL S SK + GWRLG
Sbjct: 287 DVYGTFADGFQSLF------AICPANTLLVYSFSKYFGATGWRLG 325
>pdb|4F5J|A Chain A, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P5.
pdb|4F5J|B Chain B, Rational Design And Directed Evolution For Conversion Of
Substrate Specificity From E.coli Aspartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P5
Length = 406
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + P +P ++A LE+R + + +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 230 G 230
G
Sbjct: 230 G 230
>pdb|4F5G|A Chain A, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant
P2.
pdb|4F5G|B Chain B, Rational Design And Directed Evolution Of E. Coli Apartate
Aminotransferase To Tyrosine Aminotransferase: Mutant P2
Length = 406
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + P +P ++A LE+R + + +D
Sbjct: 110 TPGGSGALRVAADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGADPTLEQWQTLAQLSVEKGWLPLIDIAYQGFGR 229
Query: 230 G 230
G
Sbjct: 230 G 230
>pdb|2NXW|A Chain A, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2NXW|B Chain B, Crystal Structure Of Phenylpyruvate Decarboxylase Of
Azospirillum Brasilense
pdb|2Q5J|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5J|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp
pdb|2Q5L|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5L|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 2-(1- Hydroxyethyl)-3-Deaza-Thdp
pdb|2Q5O|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5O|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And Phenylpyruvate
pdb|2Q5Q|A Chain A, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
pdb|2Q5Q|B Chain B, X-Ray Structure Of Phenylpyruvate Decarboxylase In Complex
With 3- Deaza-Thdp And 5-Phenyl-2-Oxo-Valeric Acid
Length = 565
Score = 32.0 bits (71), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Query: 168 WEVDLDGLEALADENTVAMVIVNPGNP----CGNVFTYQQLQKIAEKARKLGIMVIS 220
W VD D L A ADE AM +P C V Y K+AE A++LG+ V++
Sbjct: 201 WPVDRDALAACADEVLAAMRSAT--SPVLMVCVEVRRYGLEAKVAELAQRLGVPVVT 255
>pdb|2ZY3|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY3|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|A Chain A, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|B Chain B, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|C Chain C, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|D Chain D, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|E Chain E, Dodecameric L-Aspartate Beta-Decarboxylase
pdb|2ZY4|F Chain F, Dodecameric L-Aspartate Beta-Decarboxylase
Length = 546
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE--KARKLGIMVISD 221
P W+ L+ L D VNP NP + L+++ + +M+++D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264
+VY TF + ++ S SK + GWRLG
Sbjct: 287 DVYG--TFADDFQSLFAICPENTLLVY--SFSKYFGATGWRLG 325
>pdb|2ZY5|A Chain A, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|B Chain B, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|C Chain C, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|D Chain D, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|E Chain E, R487a Mutant Of L-Aspartate Beta-Decarboxylase
pdb|2ZY5|F Chain F, R487a Mutant Of L-Aspartate Beta-Decarboxylase
Length = 546
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 41/103 (39%), Gaps = 6/103 (5%)
Query: 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE--KARKLGIMVISD 221
P W+ L+ L D VNP NP + L+++ + +M+++D
Sbjct: 227 PSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTD 286
Query: 222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264
+VY TF + ++ S SK + GWRLG
Sbjct: 287 DVYG--TFADDFQSLFAICPENTLLVY--SFSKYFGATGWRLG 325
>pdb|4F5F|A Chain A, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1.
pdb|4F5F|B Chain B, Structure Of Aspartate Aminotransferase Conversion To
Tyrosine Aminotransferase: Chimera P1
Length = 406
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/121 (23%), Positives = 52/121 (42%), Gaps = 5/121 (4%)
Query: 115 TAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172
T G A++V LA+ + + + P +P ++A LE+R + + +D
Sbjct: 110 TPGGSGALRVGADFLAKNTSVKRVWVSNPSWPNHKAIFNSAGLEVREYAYYDAENHTLDF 169
Query: 173 DGLEALADENTVAMVIVNPG---NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229
D L +E V++ G NP G T +Q Q +A+ + + G + + D Y
Sbjct: 170 DALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLIDFAYQGFGR 229
Query: 230 G 230
G
Sbjct: 230 G 230
>pdb|2D5W|A Chain A, The Crystal Structure Of Oligopeptide Binding Protein From
Thermus Thermophilus Hb8 Complexed With Pentapeptide
pdb|2D5W|B Chain B, The Crystal Structure Of Oligopeptide Binding Protein From
Thermus Thermophilus Hb8 Complexed With Pentapeptide
Length = 603
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 48/126 (38%), Gaps = 15/126 (11%)
Query: 105 CKLSPDDVYLTAGCKQAIQVILTVLARPGA-----NILLP------KPGFPLYEANARHT 153
C++ D L K+ Q IL L R G + L P P PL+ N +
Sbjct: 314 CQVVKD---LGLNDKRTRQAILHALNREGLVKAFFDGLQPVAHTWIAPVNPLFNPNVKKY 370
Query: 154 RLEIRHFD-LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212
+++ + LL E GW DG+ + GNV + Q AE +
Sbjct: 371 EFDLKKAEALLAEMGWRKGPDGILQRTVNGRTVRFEIEYVTTAGNVVRERTQQFFAEDLK 430
Query: 213 KLGIMV 218
K+GI V
Sbjct: 431 KIGIAV 436
>pdb|2J5I|A Chain A, Crystal Structure Of Hydroxycinnamoyl-Coa Hydratase-Lyase
Length = 276
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 7/71 (9%)
Query: 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238
ADE T + +N G P GN+ + + + + IM TFG MG
Sbjct: 134 ADEATFGLSEINWGIPPGNLVSKAMADTVGHRQSLMYIMTGK-------TFGGQKAAEMG 186
Query: 239 VFGSTVPVITL 249
+ +VP+ L
Sbjct: 187 LVNESVPLAQL 197
>pdb|4E8C|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8C|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase In
Complex With Galactose
pdb|4E8D|A Chain A, Crystal Structure Of Streptococcal Beta-Galactosidase
pdb|4E8D|B Chain B, Crystal Structure Of Streptococcal Beta-Galactosidase
Length = 595
Score = 29.6 bits (65), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 159 HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ---QLQKIAEKARKLG 215
H+ +P + W L L+AL V N PC F ++ L+K + A+ LG
Sbjct: 25 HYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIAQDLG 84
Query: 216 IMVI 219
+ I
Sbjct: 85 LYAI 88
>pdb|1QKN|A Chain A, Rat Oestrogen Receptor Beta Ligand-Binding Domain In
Complex With Antagonist Raloxifene
pdb|1HJ1|A Chain A, Rat Oestrogen Receptor Beta Ligand-Binding Domain In
Complex With Pure Antioestrogen Ici164,384
Length = 255
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179
Q++LT+L N+L+ +P P EA+ + ++ +L+ GW + G L+
Sbjct: 13 QLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELS 69
>pdb|2J7X|A Chain A, Structure Of Estradiol-bound Estrogen Receptor Beta Lbd In
Complex With Lxxll Motif From Ncoa5
pdb|2J7Y|A Chain A, Structure Of 17-Epiestriol-Bound Estrogen Receptor Beta
Lbd In Complex With Lxxll Motif From Ncoa5
Length = 255
Score = 28.5 bits (62), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179
Q++LT+L N+L+ +P P EA+ + ++ +L+ GW + G L+
Sbjct: 13 QLVLTLLEAEPPNVLVSRPSMPFTEASMMMSLTKLADKELVHMIGWAKKIPGFVELS 69
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,438,104
Number of Sequences: 62578
Number of extensions: 511341
Number of successful extensions: 1396
Number of sequences better than 100.0: 113
Number of HSP's better than 100.0 without gapping: 76
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 1205
Number of HSP's gapped (non-prelim): 121
length of query: 421
length of database: 14,973,337
effective HSP length: 101
effective length of query: 320
effective length of database: 8,652,959
effective search space: 2768946880
effective search space used: 2768946880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)