Query 014631
Match_columns 421
No_of_seqs 179 out of 2325
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 07:01:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014631.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014631hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 4.2E-64 9.2E-69 437.5 42.0 409 10-419 28-436 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 2.3E-60 4.9E-65 455.3 47.5 415 6-420 13-428 (430)
3 PLN02187 rooty/superroot1 100.0 3E-59 6.6E-64 450.2 47.5 409 8-420 31-442 (462)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.1E-59 2.5E-64 441.4 43.4 357 44-417 28-392 (393)
5 PLN02656 tyrosine transaminase 100.0 4.4E-57 9.5E-62 431.7 45.7 396 26-421 12-408 (409)
6 PLN00143 tyrosine/nicotianamin 100.0 2.4E-56 5.1E-61 426.3 46.3 394 27-420 15-408 (409)
7 TIGR01265 tyr_nico_aTase tyros 100.0 5.1E-54 1.1E-58 410.4 46.1 402 10-417 1-402 (403)
8 TIGR01264 tyr_amTase_E tyrosin 100.0 5.4E-54 1.2E-58 410.4 45.4 400 10-417 1-400 (401)
9 PTZ00433 tyrosine aminotransfe 100.0 2.4E-53 5.2E-58 406.6 45.5 375 42-419 31-411 (412)
10 PRK13355 bifunctional HTH-doma 100.0 2.8E-53 6.1E-58 416.1 44.7 398 10-418 115-516 (517)
11 PRK06855 aminotransferase; Val 100.0 8.3E-53 1.8E-57 404.2 43.5 374 42-418 30-431 (433)
12 PLN00175 aminotransferase fami 100.0 2E-52 4.4E-57 399.1 43.3 371 17-415 34-412 (413)
13 PRK06207 aspartate aminotransf 100.0 4.4E-52 9.4E-57 396.4 42.6 377 25-418 19-404 (405)
14 PRK08068 transaminase; Reviewe 100.0 2E-51 4.4E-56 391.1 43.3 375 17-413 7-386 (389)
15 PRK07681 aspartate aminotransf 100.0 2.1E-51 4.7E-56 392.0 43.4 371 19-412 9-384 (399)
16 PRK08960 hypothetical protein; 100.0 3.2E-51 7E-56 389.5 43.9 375 18-415 8-386 (387)
17 PRK07366 succinyldiaminopimela 100.0 1.5E-51 3.2E-56 392.2 41.3 355 42-414 28-388 (388)
18 PRK06348 aspartate aminotransf 100.0 5.2E-51 1.1E-55 387.4 43.1 370 18-413 9-382 (384)
19 PTZ00377 alanine aminotransfer 100.0 3.5E-51 7.6E-56 398.1 41.8 398 17-420 12-479 (481)
20 PRK08636 aspartate aminotransf 100.0 9.5E-51 2.1E-55 387.8 43.9 381 19-418 10-402 (403)
21 PRK09276 LL-diaminopimelate am 100.0 1.4E-50 3E-55 385.3 43.2 351 42-412 29-384 (385)
22 TIGR03540 DapC_direct LL-diami 100.0 1.5E-50 3.3E-55 384.8 43.2 351 42-412 27-382 (383)
23 PRK06107 aspartate aminotransf 100.0 1.8E-50 3.9E-55 385.8 43.9 361 42-417 31-401 (402)
24 PRK09147 succinyldiaminopimela 100.0 1E-50 2.2E-55 387.2 42.1 369 20-415 6-395 (396)
25 PRK09265 aminotransferase AlaT 100.0 3.6E-50 7.8E-55 384.2 45.0 391 19-418 10-403 (404)
26 PRK07682 hypothetical protein; 100.0 8.9E-51 1.9E-55 385.7 40.5 353 44-417 20-377 (378)
27 PRK09148 aminotransferase; Val 100.0 4.3E-50 9.3E-55 383.0 43.8 360 43-419 29-393 (405)
28 PRK07337 aminotransferase; Val 100.0 6.4E-50 1.4E-54 380.9 43.1 377 19-414 7-387 (388)
29 PRK05942 aspartate aminotransf 100.0 5.5E-50 1.2E-54 381.7 42.4 352 42-413 33-389 (394)
30 PRK06108 aspartate aminotransf 100.0 1.1E-49 2.4E-54 379.4 43.0 370 20-415 6-381 (382)
31 PRK08361 aspartate aminotransf 100.0 6.3E-50 1.4E-54 381.1 41.3 373 19-416 14-390 (391)
32 KOG0257 Kynurenine aminotransf 100.0 3.8E-51 8.2E-56 363.2 30.0 349 49-411 36-414 (420)
33 PRK05957 aspartate aminotransf 100.0 3.2E-49 6.8E-54 375.6 44.7 357 43-420 26-389 (389)
34 PRK08363 alanine aminotransfer 100.0 2.9E-49 6.2E-54 377.5 43.5 367 41-417 27-395 (398)
35 PRK06290 aspartate aminotransf 100.0 2.7E-49 5.8E-54 376.6 42.9 356 42-417 42-406 (410)
36 PLN02231 alanine transaminase 100.0 9.1E-50 2E-54 388.0 40.0 381 20-419 112-530 (534)
37 PRK05764 aspartate aminotransf 100.0 4.1E-49 9E-54 376.6 44.0 384 17-417 6-392 (393)
38 PRK07590 L,L-diaminopimelate a 100.0 1.4E-49 3E-54 380.5 40.7 359 29-413 19-408 (409)
39 PRK07324 transaminase; Validat 100.0 7.2E-50 1.6E-54 377.4 37.5 347 42-417 24-371 (373)
40 PRK08912 hypothetical protein; 100.0 3.3E-49 7.3E-54 375.9 42.1 372 19-416 8-386 (387)
41 TIGR03538 DapC_gpp succinyldia 100.0 2.8E-49 6.1E-54 376.9 41.5 365 22-413 7-392 (393)
42 PRK07683 aminotransferase A; V 100.0 8.9E-49 1.9E-53 372.2 44.4 372 18-417 8-384 (387)
43 PRK12414 putative aminotransfe 100.0 3.9E-49 8.4E-54 374.3 41.7 349 43-412 28-383 (384)
44 PRK07568 aspartate aminotransf 100.0 1E-48 2.2E-53 374.4 44.1 379 19-421 7-397 (397)
45 PRK07309 aromatic amino acid a 100.0 1.3E-48 2.9E-53 371.6 43.6 373 19-418 11-390 (391)
46 COG1168 MalY Bifunctional PLP- 100.0 6E-49 1.3E-53 345.8 37.2 357 43-417 24-387 (388)
47 PRK09082 methionine aminotrans 100.0 4.9E-49 1.1E-53 374.1 39.4 350 43-412 29-385 (386)
48 PRK07777 aminotransferase; Val 100.0 1.9E-48 4E-53 370.7 42.7 371 19-415 6-385 (387)
49 PRK07550 hypothetical protein; 100.0 2.5E-48 5.4E-53 369.7 42.4 374 19-413 6-384 (386)
50 PLN02450 1-aminocyclopropane-1 100.0 8.5E-49 1.8E-53 378.3 38.2 361 43-418 37-432 (468)
51 PRK05839 hypothetical protein; 100.0 7.3E-48 1.6E-52 364.1 41.0 339 42-415 22-373 (374)
52 COG1167 ARO8 Transcriptional r 100.0 4.7E-48 1E-52 371.0 39.3 354 44-419 89-458 (459)
53 PLN02376 1-aminocyclopropane-1 100.0 5.9E-48 1.3E-52 373.4 40.1 380 24-418 24-440 (496)
54 TIGR03537 DapC succinyldiamino 100.0 8.5E-48 1.8E-52 361.1 39.1 342 45-412 1-349 (350)
55 PLN02607 1-aminocyclopropane-1 100.0 6.4E-48 1.4E-52 369.3 38.1 363 42-419 45-440 (447)
56 PRK08175 aminotransferase; Val 100.0 3.1E-47 6.7E-52 362.9 41.5 355 43-417 28-390 (395)
57 PRK09275 aspartate aminotransf 100.0 1.8E-47 3.8E-52 366.5 36.8 374 27-419 76-520 (527)
58 TIGR03542 DAPAT_plant LL-diami 100.0 1.3E-46 2.8E-51 359.3 39.8 344 42-413 31-401 (402)
59 PRK06836 aspartate aminotransf 100.0 4.9E-46 1.1E-50 354.3 43.3 370 25-418 14-393 (394)
60 PRK09257 aromatic amino acid a 100.0 2.6E-47 5.5E-52 363.6 33.9 370 20-414 6-396 (396)
61 PRK15481 transcriptional regul 100.0 2.5E-46 5.4E-51 360.5 36.4 338 44-415 85-430 (431)
62 PTZ00376 aspartate aminotransf 100.0 1.6E-46 3.4E-51 358.7 34.2 372 19-415 8-402 (404)
63 PF00155 Aminotran_1_2: Aminot 100.0 4.8E-47 1E-51 358.9 28.7 349 45-410 2-363 (363)
64 PRK06225 aspartate aminotransf 100.0 4.3E-45 9.3E-50 346.8 40.3 349 43-419 27-379 (380)
65 PRK07865 N-succinyldiaminopime 100.0 4.1E-45 8.9E-50 344.9 39.4 330 43-411 26-363 (364)
66 TIGR03801 asp_4_decarbox aspar 100.0 2.4E-45 5.3E-50 351.3 37.4 377 27-420 70-520 (521)
67 PLN02368 alanine transaminase 100.0 4.8E-46 1E-50 351.7 31.3 331 18-356 14-397 (407)
68 TIGR03539 DapC_actino succinyl 100.0 2.1E-44 4.6E-49 338.8 39.5 345 25-410 4-356 (357)
69 PRK01533 histidinol-phosphate 100.0 3.2E-45 7E-50 344.0 32.5 330 43-418 28-357 (366)
70 PRK14809 histidinol-phosphate 100.0 1.2E-44 2.5E-49 340.9 36.2 328 43-415 29-356 (357)
71 PLN02672 methionine S-methyltr 100.0 1.3E-44 2.7E-49 366.4 38.6 356 41-415 694-1079(1082)
72 PLN02397 aspartate transaminas 100.0 1.3E-44 2.9E-49 346.1 36.7 371 18-415 26-420 (423)
73 PRK03158 histidinol-phosphate 100.0 5.9E-45 1.3E-49 343.5 33.5 331 43-413 28-358 (359)
74 PRK06358 threonine-phosphate d 100.0 2.5E-44 5.5E-49 337.4 37.1 334 43-414 18-353 (354)
75 PRK02610 histidinol-phosphate 100.0 2.7E-44 5.9E-49 340.0 36.8 336 45-417 29-372 (374)
76 PRK09440 avtA valine--pyruvate 100.0 6.1E-44 1.3E-48 343.0 39.0 357 43-420 29-415 (416)
77 PRK08056 threonine-phosphate d 100.0 2.1E-43 4.6E-48 331.9 36.5 334 43-415 19-354 (356)
78 PRK05166 histidinol-phosphate 100.0 2.6E-43 5.6E-48 333.2 35.2 333 43-413 35-368 (371)
79 PRK08637 hypothetical protein; 100.0 1.1E-42 2.4E-47 330.6 37.5 358 45-418 4-388 (388)
80 PRK03317 histidinol-phosphate 100.0 4.7E-43 1E-47 331.4 34.6 335 45-416 27-364 (368)
81 PRK07392 threonine-phosphate d 100.0 9.6E-43 2.1E-47 328.1 36.0 329 43-410 21-356 (360)
82 PLN03026 histidinol-phosphate 100.0 1.1E-42 2.3E-47 329.1 36.2 327 43-412 51-378 (380)
83 PRK02731 histidinol-phosphate 100.0 1.4E-42 3E-47 328.6 36.0 335 43-415 31-365 (367)
84 PRK04870 histidinol-phosphate 100.0 8.3E-43 1.8E-47 328.4 33.8 327 43-413 25-355 (356)
85 COG0079 HisC Histidinol-phosph 100.0 2E-42 4.4E-47 318.9 35.4 332 44-416 22-354 (356)
86 PRK08153 histidinol-phosphate 100.0 5.3E-42 1.1E-46 323.6 37.0 336 43-419 30-368 (369)
87 PRK05387 histidinol-phosphate 100.0 4E-42 8.6E-47 323.8 34.5 328 43-415 23-352 (353)
88 PRK09105 putative aminotransfe 100.0 5.5E-42 1.2E-46 322.8 35.4 325 44-414 43-368 (370)
89 PRK14807 histidinol-phosphate 100.0 2E-41 4.3E-46 317.9 37.1 327 44-414 22-350 (351)
90 TIGR01141 hisC histidinol-phos 100.0 1.8E-41 3.9E-46 318.4 32.5 328 42-410 17-345 (346)
91 PRK07908 hypothetical protein; 100.0 1E-40 2.2E-45 313.2 37.2 324 43-415 21-346 (349)
92 KOG0256 1-aminocyclopropane-1- 100.0 4.7E-41 1E-45 296.2 30.9 329 80-418 115-463 (471)
93 PRK01688 histidinol-phosphate 100.0 1.8E-41 3.8E-46 317.8 29.4 320 45-410 29-350 (351)
94 PRK04781 histidinol-phosphate 100.0 8.8E-41 1.9E-45 314.4 33.2 304 79-413 53-360 (364)
95 PRK03321 putative aminotransfe 100.0 2.3E-40 5E-45 311.4 32.5 329 44-415 22-350 (352)
96 PRK00950 histidinol-phosphate 100.0 7.8E-40 1.7E-44 309.2 34.1 325 43-414 33-360 (361)
97 PRK04635 histidinol-phosphate 100.0 4.5E-40 9.7E-45 309.1 30.5 321 43-412 30-351 (354)
98 PRK14808 histidinol-phosphate 100.0 3.4E-39 7.3E-44 300.0 33.9 318 42-413 17-334 (335)
99 PRK03967 histidinol-phosphate 100.0 5.5E-39 1.2E-43 299.3 34.6 319 43-417 17-335 (337)
100 PRK06425 histidinol-phosphate 100.0 3.9E-39 8.5E-44 299.8 32.8 295 79-414 34-331 (332)
101 PRK05664 threonine-phosphate d 100.0 3E-38 6.5E-43 293.5 36.0 309 44-416 20-328 (330)
102 TIGR01140 L_thr_O3P_dcar L-thr 100.0 8.8E-39 1.9E-43 297.2 32.0 312 42-410 15-329 (330)
103 PRK06959 putative threonine-ph 100.0 8.2E-38 1.8E-42 291.0 35.1 312 44-419 24-336 (339)
104 PRK08354 putative aminotransfe 100.0 1.1E-37 2.5E-42 287.3 35.4 302 43-412 7-308 (311)
105 KOG0634 Aromatic amino acid am 100.0 6.1E-38 1.3E-42 278.8 30.5 327 80-419 94-469 (472)
106 cd00609 AAT_like Aspartate ami 100.0 1.7E-36 3.7E-41 285.6 39.4 346 47-411 1-349 (350)
107 COG3977 Alanine-alpha-ketoisov 100.0 3.7E-35 8E-40 248.7 32.8 364 24-419 13-414 (417)
108 PRK13238 tnaA tryptophanase/L- 100.0 2E-34 4.3E-39 276.0 32.9 366 19-416 13-433 (460)
109 PRK10874 cysteine sulfinate de 100.0 3.4E-33 7.3E-38 267.4 36.8 333 44-417 18-399 (401)
110 TIGR03392 FeS_syn_CsdA cystein 100.0 4.4E-33 9.6E-38 266.3 35.8 333 44-417 15-396 (398)
111 PLN02822 serine palmitoyltrans 100.0 2E-33 4.4E-38 271.5 33.3 349 42-418 107-479 (481)
112 COG0520 csdA Selenocysteine ly 100.0 3.2E-32 7E-37 255.3 37.6 349 24-415 5-404 (405)
113 KOG0258 Alanine aminotransfera 100.0 6.3E-33 1.4E-37 243.1 28.3 345 64-417 89-470 (475)
114 COG1448 TyrB Aspartate/tyrosin 100.0 5E-33 1.1E-37 245.4 27.9 370 17-413 3-395 (396)
115 PRK09295 bifunctional cysteine 100.0 6E-32 1.3E-36 258.9 35.3 332 44-415 22-403 (406)
116 PLN02855 Bifunctional selenocy 100.0 7.3E-32 1.6E-36 259.6 35.8 337 43-419 30-421 (424)
117 TIGR03576 pyridox_MJ0158 pyrid 100.0 6.9E-32 1.5E-36 250.4 33.3 308 58-414 30-345 (346)
118 TIGR01979 sufS cysteine desulf 100.0 1.4E-31 3E-36 256.7 35.5 334 43-417 16-402 (403)
119 TIGR01822 2am3keto_CoA 2-amino 100.0 1.9E-31 4.2E-36 254.9 35.3 331 42-417 36-390 (393)
120 PRK06939 2-amino-3-ketobutyrat 100.0 6.8E-31 1.5E-35 251.7 34.6 337 42-417 40-394 (397)
121 TIGR00858 bioF 8-amino-7-oxono 100.0 9E-31 2E-35 247.6 34.3 327 42-411 14-360 (360)
122 PRK02627 acetylornithine amino 100.0 1.1E-30 2.5E-35 249.8 33.7 339 42-417 37-395 (396)
123 TIGR01825 gly_Cac_T_rel pyrido 100.0 4E-30 8.6E-35 245.2 34.9 338 41-418 30-383 (385)
124 PLN02483 serine palmitoyltrans 100.0 3.1E-30 6.8E-35 249.8 34.4 335 43-417 99-467 (489)
125 PRK13392 5-aminolevulinate syn 100.0 2.7E-30 5.9E-35 247.6 33.6 333 43-417 45-398 (410)
126 PRK05958 8-amino-7-oxononanoat 100.0 5.5E-30 1.2E-34 244.5 34.9 334 42-414 37-385 (385)
127 COG1104 NifS Cysteine sulfinat 100.0 9.8E-31 2.1E-35 235.8 26.9 338 46-419 2-380 (386)
128 cd06451 AGAT_like Alanine-glyo 100.0 2.6E-30 5.6E-35 243.9 31.0 319 60-414 8-355 (356)
129 PRK01278 argD acetylornithine 100.0 1.3E-29 2.8E-34 241.4 34.8 339 41-416 28-388 (389)
130 TIGR01976 am_tr_V_VC1184 cyste 100.0 5.8E-30 1.2E-34 245.0 32.0 324 46-410 18-397 (397)
131 cd00617 Tnase_like Tryptophana 100.0 1.8E-29 4E-34 238.3 33.7 346 42-416 9-408 (431)
132 KOG0633 Histidinol phosphate a 100.0 2.1E-30 4.6E-35 215.6 23.7 331 43-413 40-374 (375)
133 TIGR03402 FeS_nifS cysteine de 100.0 1.2E-29 2.6E-34 241.1 32.5 333 48-418 2-374 (379)
134 TIGR01821 5aminolev_synth 5-am 100.0 3.6E-29 7.8E-34 239.4 34.9 333 43-417 44-397 (402)
135 TIGR03403 nifS_epsilon cystein 100.0 2.7E-29 5.9E-34 238.8 33.8 338 48-418 2-377 (382)
136 PRK02948 cysteine desulfurase; 100.0 8.8E-30 1.9E-34 242.2 30.0 335 47-419 2-377 (381)
137 PRK07179 hypothetical protein; 100.0 6.9E-29 1.5E-33 237.7 36.0 332 42-417 52-399 (407)
138 TIGR00707 argD acetylornithine 100.0 2.7E-29 5.8E-34 239.0 32.7 333 42-414 25-379 (379)
139 PRK03244 argD acetylornithine 100.0 2.8E-29 6.1E-34 239.9 31.9 336 41-418 40-396 (398)
140 PRK09064 5-aminolevulinate syn 100.0 6.6E-29 1.4E-33 238.1 34.4 332 43-417 45-398 (407)
141 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 1E-28 2.2E-33 233.3 33.7 322 61-417 19-369 (370)
142 cd00378 SHMT Serine-glycine hy 100.0 6.9E-29 1.5E-33 237.9 32.2 339 44-416 19-385 (402)
143 PLN02409 serine--glyoxylate am 100.0 1.2E-28 2.6E-33 234.8 33.3 325 61-418 19-374 (401)
144 PLN02721 threonine aldolase 100.0 6.1E-29 1.3E-33 234.4 30.6 330 44-416 5-352 (353)
145 cd06454 KBL_like KBL_like; thi 100.0 1.5E-28 3.2E-33 231.4 33.2 327 45-413 2-348 (349)
146 cd06502 TA_like Low-specificit 100.0 4.2E-29 9.1E-34 234.1 28.8 313 60-412 8-337 (338)
147 cd06453 SufS_like Cysteine des 100.0 8.7E-29 1.9E-33 235.0 31.2 315 61-410 10-373 (373)
148 PRK10534 L-threonine aldolase; 100.0 2.7E-29 5.9E-34 234.5 27.0 314 47-415 2-332 (333)
149 TIGR01977 am_tr_V_EF2568 cyste 100.0 9.8E-29 2.1E-33 234.9 31.2 333 48-412 2-375 (376)
150 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 5.7E-28 1.2E-32 227.9 33.8 322 60-414 11-360 (361)
151 PRK13393 5-aminolevulinate syn 100.0 1.1E-27 2.4E-32 229.2 35.1 332 43-417 44-397 (406)
152 PRK02936 argD acetylornithine 100.0 9E-28 1.9E-32 228.0 33.2 336 41-414 26-377 (377)
153 TIGR02006 IscS cysteine desulf 100.0 1.2E-27 2.5E-32 228.8 32.4 337 46-418 4-379 (402)
154 cd00613 GDC-P Glycine cleavage 100.0 3.2E-27 6.9E-32 226.3 33.9 330 43-410 19-398 (398)
155 PF12897 Aminotran_MocR: Alani 100.0 5.2E-28 1.1E-32 214.1 25.2 310 79-414 61-413 (425)
156 PRK04073 rocD ornithine--oxo-a 100.0 2E-27 4.4E-32 226.5 30.7 335 41-414 37-395 (396)
157 cd00610 OAT_like Acetyl ornith 100.0 1.7E-27 3.8E-32 229.3 30.5 346 42-414 34-413 (413)
158 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 6.3E-27 1.4E-31 222.3 33.9 339 43-418 17-383 (387)
159 COG0156 BioF 7-keto-8-aminopel 100.0 4.3E-27 9.3E-32 216.3 31.2 328 43-413 38-387 (388)
160 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 6E-27 1.3E-31 221.0 32.6 319 61-414 9-355 (355)
161 PRK05093 argD bifunctional N-s 100.0 8.1E-27 1.7E-31 222.9 32.4 336 41-417 37-401 (403)
162 PRK14012 cysteine desulfurase; 100.0 1.2E-26 2.6E-31 222.0 33.5 336 46-418 4-381 (404)
163 PRK13520 L-tyrosine decarboxyl 100.0 1.9E-26 4E-31 219.0 34.0 324 61-415 31-370 (371)
164 TIGR02326 transamin_PhnW 2-ami 100.0 1.7E-26 3.6E-31 218.3 32.0 293 88-414 37-360 (363)
165 cd06450 DOPA_deC_like DOPA dec 100.0 1.5E-27 3.2E-32 224.2 24.4 310 62-412 11-344 (345)
166 PRK12381 bifunctional succinyl 100.0 1.9E-26 4.1E-31 220.1 31.9 345 41-420 36-403 (406)
167 PF00266 Aminotran_5: Aminotra 100.0 7.9E-26 1.7E-30 214.2 34.6 319 47-406 1-371 (371)
168 PLN02651 cysteine desulfurase 100.0 2.1E-26 4.6E-31 217.4 29.8 322 47-404 1-364 (364)
169 PLN03227 serine palmitoyltrans 100.0 4.2E-26 9E-31 216.0 31.6 337 48-417 2-383 (392)
170 TIGR00713 hemL glutamate-1-sem 100.0 3.1E-26 6.6E-31 220.5 30.7 344 41-416 45-422 (423)
171 PRK13479 2-aminoethylphosphona 100.0 9.5E-26 2.1E-30 213.6 32.9 323 61-418 15-365 (368)
172 TIGR03812 tyr_de_CO2_Arch tyro 100.0 3.4E-25 7.3E-30 210.4 36.3 340 28-412 7-372 (373)
173 PRK08088 4-aminobutyrate amino 100.0 9.4E-26 2E-30 216.5 31.9 354 41-417 38-424 (425)
174 PLN00144 acetylornithine trans 100.0 1.6E-25 3.4E-30 211.4 31.6 342 41-417 12-381 (382)
175 PRK07049 methionine gamma-lyas 100.0 1.9E-25 4.1E-30 212.9 32.4 229 80-344 78-320 (427)
176 PRK00854 rocD ornithine--oxo-a 100.0 3.6E-25 7.9E-30 211.8 32.2 332 42-415 39-400 (401)
177 PRK04260 acetylornithine amino 99.9 7.4E-25 1.6E-29 207.6 33.4 333 42-413 27-374 (375)
178 PTZ00125 ornithine aminotransf 99.9 1.3E-24 2.7E-29 208.2 34.2 345 42-419 29-398 (400)
179 COG4992 ArgD Ornithine/acetylo 99.9 4.9E-25 1.1E-29 198.6 29.1 342 41-420 39-402 (404)
180 PRK00011 glyA serine hydroxyme 99.9 1.6E-24 3.4E-29 208.5 34.3 339 43-416 24-389 (416)
181 PRK00451 glycine dehydrogenase 99.9 5.6E-25 1.2E-29 213.4 31.5 326 45-414 69-446 (447)
182 PRK07505 hypothetical protein; 99.9 1.5E-24 3.3E-29 207.3 33.6 330 42-416 44-399 (402)
183 TIGR03246 arg_catab_astC succi 99.9 1.2E-24 2.6E-29 207.1 32.6 335 42-417 33-396 (397)
184 PLN02955 8-amino-7-oxononanoat 99.9 2.3E-24 4.9E-29 202.9 33.9 326 43-417 101-462 (476)
185 KOG1549 Cysteine desulfurase N 99.9 4E-25 8.7E-30 200.2 26.6 347 42-418 40-420 (428)
186 TIGR03235 DNA_S_dndA cysteine 99.9 8.8E-26 1.9E-30 212.5 23.2 309 61-405 9-347 (353)
187 PRK08247 cystathionine gamma-s 99.9 1.2E-24 2.6E-29 204.5 30.6 284 86-416 52-364 (366)
188 TIGR01437 selA_rel uncharacter 99.9 1.6E-24 3.4E-29 203.4 30.7 327 43-414 7-363 (363)
189 TIGR00700 GABAtrnsam 4-aminobu 99.9 2.5E-24 5.5E-29 206.1 32.1 353 41-415 30-419 (420)
190 PLN02242 methionine gamma-lyas 99.9 1.2E-24 2.7E-29 206.5 29.3 217 84-339 74-300 (418)
191 PRK06234 methionine gamma-lyas 99.9 2E-24 4.3E-29 204.9 30.6 217 84-339 62-288 (400)
192 PRK04366 glycine dehydrogenase 99.9 1.2E-23 2.6E-28 204.0 35.1 340 48-418 72-450 (481)
193 PRK09792 4-aminobutyrate trans 99.9 1.6E-23 3.6E-28 200.1 34.8 350 41-415 37-420 (421)
194 PRK04612 argD acetylornithine 99.9 1.1E-23 2.3E-28 199.9 33.2 347 41-421 37-408 (408)
195 PRK06918 4-aminobutyrate amino 99.9 1.9E-23 4.1E-28 201.6 35.2 357 41-418 51-445 (451)
196 TIGR01814 kynureninase kynuren 99.9 7.4E-24 1.6E-28 202.8 30.8 326 44-414 26-405 (406)
197 PRK05937 8-amino-7-oxononanoat 99.9 2.9E-23 6.2E-28 196.2 34.1 327 43-419 3-353 (370)
198 KOG1412 Aspartate aminotransfe 99.9 3.9E-24 8.5E-29 182.7 25.0 377 18-418 8-407 (410)
199 PRK07504 O-succinylhomoserine 99.9 1.8E-23 4E-28 198.1 32.5 217 86-339 65-286 (398)
200 PRK08133 O-succinylhomoserine 99.9 1.6E-23 3.6E-28 198.0 31.8 220 87-344 62-286 (390)
201 PRK06767 methionine gamma-lyas 99.9 8.5E-24 1.9E-28 200.0 29.3 289 81-416 57-385 (386)
202 PRK08776 cystathionine gamma-s 99.9 2.9E-23 6.3E-28 196.6 32.5 214 88-339 62-281 (405)
203 PRK06777 4-aminobutyrate amino 99.9 2.5E-23 5.5E-28 198.8 32.1 348 41-415 37-420 (421)
204 COG0075 Serine-pyruvate aminot 99.9 4.7E-23 1E-27 187.8 31.3 330 61-418 15-365 (383)
205 PRK06460 hypothetical protein; 99.9 3.1E-23 6.7E-28 195.2 31.0 221 85-344 44-270 (376)
206 PLN02624 ornithine-delta-amino 99.9 6.1E-23 1.3E-27 198.6 33.5 344 41-417 72-445 (474)
207 TIGR02080 O_succ_thio_ly O-suc 99.9 2.7E-23 5.8E-28 195.7 30.2 227 79-344 45-277 (382)
208 PRK08045 cystathionine gamma-s 99.9 6E-23 1.3E-27 193.4 32.5 224 79-341 46-275 (386)
209 PRK08249 cystathionine gamma-s 99.9 3.2E-23 7E-28 196.0 30.6 216 85-339 63-284 (398)
210 PRK08861 cystathionine gamma-s 99.9 6.2E-23 1.3E-27 192.6 31.6 225 81-344 49-279 (388)
211 cd00614 CGS_like CGS_like: Cys 99.9 3.5E-23 7.6E-28 195.1 30.0 223 84-344 38-266 (369)
212 TIGR01885 Orn_aminotrans ornit 99.9 7.4E-23 1.6E-27 195.6 32.3 334 42-414 35-400 (401)
213 PRK08360 4-aminobutyrate amino 99.9 3.4E-22 7.4E-27 191.5 36.7 350 41-419 38-429 (443)
214 PRK07810 O-succinylhomoserine 99.9 4.8E-23 1E-27 195.2 30.3 226 80-344 65-296 (403)
215 PRK09028 cystathionine beta-ly 99.9 1.5E-22 3.2E-27 189.8 32.9 244 60-344 35-286 (394)
216 PRK07811 cystathionine gamma-s 99.9 7.6E-23 1.6E-27 193.4 31.2 223 84-344 59-287 (388)
217 TIGR01328 met_gam_lyase methio 99.9 9.1E-23 2E-27 192.9 31.6 219 87-344 60-286 (391)
218 PRK06058 4-aminobutyrate amino 99.9 2.4E-22 5.2E-27 193.4 34.7 352 41-417 53-443 (443)
219 PRK00062 glutamate-1-semialdeh 99.9 3.5E-23 7.5E-28 198.5 28.6 345 41-417 47-425 (426)
220 PRK07503 methionine gamma-lyas 99.9 9.9E-23 2.2E-27 193.4 31.4 215 86-339 65-287 (403)
221 COG0160 GabT 4-aminobutyrate a 99.9 3E-22 6.5E-27 186.2 33.6 350 41-417 53-446 (447)
222 PRK08574 cystathionine gamma-s 99.9 1.3E-22 2.8E-27 191.2 31.3 216 85-339 52-273 (385)
223 PRK07495 4-aminobutyrate amino 99.9 4E-22 8.7E-27 190.2 34.2 353 41-419 37-424 (425)
224 PRK07582 cystathionine gamma-l 99.9 9.2E-23 2E-27 191.5 29.3 218 81-341 47-270 (366)
225 TIGR01325 O_suc_HS_sulf O-succ 99.9 1.8E-22 3.9E-27 190.6 30.8 221 80-340 49-275 (380)
226 PRK08117 4-aminobutyrate amino 99.9 3.4E-22 7.3E-27 192.4 33.1 354 41-419 40-432 (433)
227 KOG1411 Aspartate aminotransfe 99.9 5.2E-24 1.1E-28 184.5 16.7 373 17-415 29-424 (427)
228 PRK05968 hypothetical protein; 99.9 3.4E-22 7.3E-27 189.1 30.3 283 87-417 64-387 (389)
229 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.4E-22 1.2E-26 187.0 31.5 302 68-411 3-352 (352)
230 TIGR02407 ectoine_ectB diamino 99.9 1.2E-21 2.5E-26 186.8 33.7 351 41-416 32-412 (412)
231 PRK09264 diaminobutyrate--2-ox 99.9 1.3E-21 2.9E-26 187.3 34.3 351 41-419 36-419 (425)
232 PRK05964 adenosylmethionine--8 99.9 4.8E-22 1E-26 190.7 31.0 347 41-417 39-423 (423)
233 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.6E-21 3.5E-26 183.4 33.4 310 62-414 9-375 (376)
234 PRK07050 cystathionine beta-ly 99.9 2.9E-22 6.3E-27 189.5 28.3 217 85-339 64-286 (394)
235 PLN02724 Molybdenum cofactor s 99.9 4.2E-22 9.1E-27 204.2 31.5 339 46-414 35-486 (805)
236 PRK08248 O-acetylhomoserine am 99.9 9.7E-22 2.1E-26 187.3 30.4 227 87-344 65-322 (431)
237 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 8.4E-22 1.8E-26 188.2 28.9 159 86-270 57-219 (418)
238 TIGR01329 cysta_beta_ly_E cyst 99.9 9.4E-22 2E-26 185.3 28.8 282 88-416 49-375 (378)
239 COG2008 GLY1 Threonine aldolas 99.9 6.9E-22 1.5E-26 174.8 25.9 315 61-414 11-341 (342)
240 PRK03715 argD acetylornithine 99.9 4.6E-21 1E-25 181.5 33.2 338 42-417 34-394 (395)
241 PRK13034 serine hydroxymethylt 99.9 7E-21 1.5E-25 181.7 34.7 334 44-416 28-392 (416)
242 PRK11658 UDP-4-amino-4-deoxy-L 99.9 3.3E-21 7.2E-26 182.3 32.1 315 63-415 13-378 (379)
243 COG0001 HemL Glutamate-1-semia 99.9 3.6E-21 7.8E-26 175.6 30.7 348 41-419 50-431 (432)
244 PRK07269 cystathionine gamma-s 99.9 4.8E-22 1E-26 185.8 25.6 286 85-415 53-363 (364)
245 PRK06084 O-acetylhomoserine am 99.9 3.4E-21 7.3E-26 183.5 31.5 226 86-344 58-317 (425)
246 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 9.2E-21 2E-25 179.2 33.4 312 63-414 10-374 (375)
247 PRK13580 serine hydroxymethylt 99.9 1.5E-20 3.3E-25 177.3 33.1 342 44-417 49-446 (493)
248 PRK06702 O-acetylhomoserine am 99.9 3.9E-21 8.5E-26 181.7 28.6 228 87-344 62-319 (432)
249 PRK03080 phosphoserine aminotr 99.9 2.1E-21 4.5E-26 183.5 26.3 326 46-420 13-377 (378)
250 PRK08064 cystathionine beta-ly 99.9 1E-20 2.2E-25 179.1 31.0 213 88-339 56-274 (390)
251 TIGR01324 cysta_beta_ly_B cyst 99.9 1.6E-20 3.4E-25 176.3 31.9 284 88-416 52-376 (377)
252 PRK05939 hypothetical protein; 99.9 1.7E-20 3.6E-25 177.3 32.2 226 88-344 49-293 (397)
253 PRK06541 hypothetical protein; 99.9 2.6E-20 5.5E-25 179.3 33.8 357 41-420 49-459 (460)
254 TIGR00709 dat 2,4-diaminobutyr 99.9 5.3E-20 1.2E-24 176.9 35.4 356 41-420 36-439 (442)
255 cd00611 PSAT_like Phosphoserin 99.9 2.7E-21 5.9E-26 181.3 25.8 311 61-413 9-353 (355)
256 PLN02509 cystathionine beta-ly 99.9 2.1E-20 4.6E-25 178.3 32.1 228 80-344 125-358 (464)
257 TIGR03588 PseC UDP-4-keto-6-de 99.9 3E-20 6.6E-25 176.4 33.1 312 62-414 8-380 (380)
258 PRK11522 putrescine--2-oxoglut 99.9 2.5E-20 5.5E-25 178.9 31.8 345 41-419 79-454 (459)
259 TIGR01788 Glu-decarb-GAD gluta 99.9 3.1E-20 6.8E-25 176.2 31.9 339 61-417 52-430 (431)
260 PTZ00094 serine hydroxymethylt 99.9 3.2E-20 6.8E-25 179.5 32.5 338 43-416 33-408 (452)
261 TIGR03372 putres_am_tran putre 99.9 2.8E-20 6E-25 177.4 31.2 344 41-414 72-442 (442)
262 PRK08593 4-aminobutyrate amino 99.9 1.3E-19 2.7E-24 174.2 35.8 352 41-420 39-433 (445)
263 TIGR01364 serC_1 phosphoserine 99.9 2.8E-20 6.1E-25 173.1 30.2 316 62-416 3-348 (349)
264 PRK15407 lipopolysaccharide bi 99.9 1.7E-19 3.8E-24 172.5 36.4 331 44-415 23-435 (438)
265 PRK05967 cystathionine beta-ly 99.9 7.1E-20 1.5E-24 171.4 32.3 216 90-344 68-289 (395)
266 PRK07678 aminotransferase; Val 99.9 1E-19 2.2E-24 175.1 34.3 355 41-417 44-450 (451)
267 PRK07671 cystathionine beta-ly 99.9 2.9E-20 6.3E-25 175.0 29.7 219 87-344 51-275 (377)
268 PRK08134 O-acetylhomoserine am 99.9 4.6E-20 1E-24 175.8 31.3 222 87-339 65-317 (433)
269 PLN02760 4-aminobutyrate:pyruv 99.9 1.2E-19 2.7E-24 175.7 34.3 350 41-417 86-492 (504)
270 PRK07812 O-acetylhomoserine am 99.9 5.2E-20 1.1E-24 175.2 30.8 227 88-344 71-326 (436)
271 PRK05994 O-acetylhomoserine am 99.9 8.1E-20 1.7E-24 174.5 31.7 226 88-344 65-321 (427)
272 PRK05769 4-aminobutyrate amino 99.9 3.1E-19 6.7E-24 171.3 35.8 349 41-417 51-440 (441)
273 PRK07482 hypothetical protein; 99.9 1.4E-19 3E-24 174.4 33.4 355 41-419 47-457 (461)
274 PRK06176 cystathionine gamma-s 99.9 7.7E-20 1.7E-24 172.2 30.2 213 88-339 52-270 (380)
275 PRK05639 4-aminobutyrate amino 99.9 3.2E-19 7E-24 171.4 33.6 350 41-418 50-445 (457)
276 COG0161 BioA Adenosylmethionin 99.9 4.6E-20 1E-24 170.5 26.4 353 42-419 42-446 (449)
277 PRK13360 omega amino acid--pyr 99.9 5E-19 1.1E-23 169.7 34.4 348 41-417 43-441 (442)
278 PRK06943 adenosylmethionine--8 99.9 3.4E-19 7.4E-24 171.2 33.2 352 41-419 51-449 (453)
279 COG0399 WecE Predicted pyridox 99.9 3.9E-19 8.4E-24 162.6 31.8 313 62-416 13-373 (374)
280 PRK05965 hypothetical protein; 99.9 2.4E-19 5.3E-24 172.7 31.9 350 41-417 43-448 (459)
281 PRK02769 histidine decarboxyla 99.9 7.7E-19 1.7E-23 164.5 34.4 290 88-417 63-373 (380)
282 PLN02414 glycine dehydrogenase 99.9 1.5E-19 3.2E-24 184.3 31.8 313 79-419 554-910 (993)
283 PRK06105 aminotransferase; Pro 99.9 4.2E-19 9.1E-24 171.1 32.3 350 41-418 45-451 (460)
284 cd00615 Orn_deC_like Ornithine 99.9 6.5E-21 1.4E-25 174.2 18.6 230 84-333 57-293 (294)
285 PRK06062 hypothetical protein; 99.9 9E-19 1.9E-23 168.4 33.8 351 41-418 50-447 (451)
286 PRK07986 adenosylmethionine--8 99.9 2.6E-19 5.7E-24 170.6 29.6 342 41-416 40-423 (428)
287 PRK08742 adenosylmethionine--8 99.9 9.7E-19 2.1E-23 168.4 33.6 354 41-418 61-469 (472)
288 PRK04013 argD acetylornithine/ 99.9 5.6E-19 1.2E-23 164.5 30.6 327 41-418 21-362 (364)
289 PRK05355 3-phosphoserine/phosp 99.9 4.1E-19 8.9E-24 166.2 29.8 315 61-417 13-359 (360)
290 PLN03226 serine hydroxymethylt 99.9 1.1E-18 2.3E-23 168.1 32.9 345 44-416 34-419 (475)
291 PRK06082 4-aminobutyrate amino 99.9 2.3E-18 5E-23 165.8 34.9 349 42-419 70-454 (459)
292 PRK08114 cystathionine beta-ly 99.9 7.6E-19 1.7E-23 164.3 30.5 219 87-344 63-289 (395)
293 PRK05630 adenosylmethionine--8 99.9 5.9E-19 1.3E-23 168.2 30.3 341 41-416 37-420 (422)
294 KOG1368 Threonine aldolase [Am 99.9 2.2E-19 4.8E-24 153.0 24.1 327 43-414 20-366 (384)
295 PRK09221 beta alanine--pyruvat 99.9 1.8E-18 3.9E-23 166.0 33.5 349 41-417 46-444 (445)
296 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.7E-19 5.9E-24 168.5 27.4 306 64-411 5-363 (363)
297 PRK07046 aminotransferase; Val 99.9 1.3E-18 2.8E-23 167.1 32.4 343 42-418 73-452 (453)
298 PRK06173 adenosylmethionine--8 99.9 1.1E-18 2.3E-23 166.6 31.2 345 41-419 41-428 (429)
299 KOG1360 5-aminolevulinate synt 99.9 5.1E-19 1.1E-23 156.5 26.4 323 57-417 181-525 (570)
300 PRK07483 hypothetical protein; 99.9 2.8E-18 6.2E-23 164.6 33.3 358 41-419 27-440 (443)
301 PRK12403 putative aminotransfe 99.9 2.6E-18 5.7E-23 165.6 33.0 352 41-419 51-455 (460)
302 PLN02880 tyrosine decarboxylas 99.9 2.5E-18 5.4E-23 166.3 32.8 341 64-419 97-487 (490)
303 PLN02590 probable tyrosine dec 99.9 3.1E-18 6.6E-23 165.6 33.3 341 64-419 145-535 (539)
304 PRK07481 hypothetical protein; 99.9 5.4E-18 1.2E-22 163.1 34.1 351 41-418 39-447 (449)
305 PRK06917 hypothetical protein; 99.9 7E-18 1.5E-22 162.1 34.8 355 41-419 28-440 (447)
306 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 3E-18 6.6E-23 159.9 31.4 281 88-415 57-386 (386)
307 PRK07030 adenosylmethionine--8 99.9 2.2E-18 4.8E-23 166.1 31.4 348 41-417 44-447 (466)
308 PRK05613 O-acetylhomoserine am 99.9 1.7E-18 3.6E-23 165.0 30.1 222 88-339 71-326 (437)
309 TIGR03531 selenium_SpcS O-phos 99.8 4.9E-18 1.1E-22 160.4 32.4 304 90-413 105-443 (444)
310 PRK06916 adenosylmethionine--8 99.8 2.4E-18 5.2E-23 165.9 31.0 348 41-418 53-457 (460)
311 PRK07036 hypothetical protein; 99.8 5.3E-18 1.2E-22 163.6 32.7 350 41-419 48-455 (466)
312 PRK06148 hypothetical protein; 99.8 4.2E-18 9E-23 178.1 34.4 351 41-417 621-1011(1013)
313 PRK06149 hypothetical protein; 99.8 3.8E-18 8.2E-23 178.4 34.0 345 42-416 583-970 (972)
314 PRK06938 diaminobutyrate--2-ox 99.8 9.8E-18 2.1E-22 161.5 34.2 356 41-418 60-462 (464)
315 PRK07480 putative aminotransfe 99.8 3.7E-18 7.9E-23 164.2 31.2 354 41-419 47-451 (456)
316 PF04864 Alliinase_C: Allinase 99.8 2.9E-20 6.2E-25 163.1 14.8 290 87-413 44-362 (363)
317 KOG1404 Alanine-glyoxylate ami 99.8 2E-18 4.4E-23 152.7 26.3 341 42-410 48-432 (442)
318 PRK12389 glutamate-1-semialdeh 99.8 6.8E-18 1.5E-22 161.8 32.3 343 41-416 50-427 (428)
319 PLN03032 serine decarboxylase; 99.8 6.3E-18 1.4E-22 157.2 30.8 286 88-412 64-372 (374)
320 TIGR02618 tyr_phenol_ly tyrosi 99.8 9.6E-18 2.1E-22 156.1 31.3 325 64-416 50-426 (450)
321 PLN02482 glutamate-1-semialdeh 99.8 6.7E-18 1.5E-22 162.3 31.0 342 42-416 97-473 (474)
322 TIGR00508 bioA adenosylmethion 99.8 6E-18 1.3E-22 161.9 30.3 341 41-416 42-426 (427)
323 PRK00615 glutamate-1-semialdeh 99.8 5E-18 1.1E-22 161.9 29.5 348 41-418 50-430 (433)
324 COG0112 GlyA Glycine/serine hy 99.8 3.1E-17 6.8E-22 146.2 31.8 339 43-416 25-390 (413)
325 KOG2862 Alanine-glyoxylate ami 99.8 1.3E-17 2.8E-22 143.2 27.6 296 89-417 53-383 (385)
326 PLN02271 serine hydroxymethylt 99.8 1.9E-17 4.1E-22 156.9 31.3 346 44-415 148-539 (586)
327 PRK06931 diaminobutyrate--2-ox 99.8 6.4E-17 1.4E-21 155.8 35.2 357 41-419 55-457 (459)
328 KOG1401 Acetylornithine aminot 99.8 1.1E-17 2.4E-22 149.3 25.5 348 41-418 53-432 (433)
329 COG0626 MetC Cystathionine bet 99.8 5.9E-17 1.3E-21 149.2 30.9 222 86-345 63-292 (396)
330 PRK06434 cystathionine gamma-l 99.8 3.1E-17 6.8E-22 153.6 29.3 219 86-345 64-288 (384)
331 PRK08297 L-lysine aminotransfe 99.8 5.6E-17 1.2E-21 155.6 31.6 347 42-417 43-442 (443)
332 TIGR01366 serC_3 phosphoserine 99.8 6.5E-18 1.4E-22 158.4 24.6 313 61-417 13-361 (361)
333 COG0076 GadB Glutamate decarbo 99.8 5.4E-17 1.2E-21 154.5 30.6 279 61-355 73-380 (460)
334 KOG1359 Glycine C-acetyltransf 99.8 2.9E-17 6.2E-22 139.9 23.0 326 43-418 66-414 (417)
335 PF00464 SHMT: Serine hydroxym 99.8 3.3E-17 7.2E-22 151.5 25.0 340 44-410 20-399 (399)
336 KOG1357 Serine palmitoyltransf 99.8 2.8E-18 6.1E-23 154.3 17.3 319 60-415 154-501 (519)
337 PRK13237 tyrosine phenol-lyase 99.8 3.8E-16 8.1E-21 146.0 32.0 310 81-416 73-433 (460)
338 TIGR03251 LAT_fam L-lysine 6-t 99.8 1.7E-16 3.7E-21 152.2 30.6 344 42-413 36-431 (431)
339 COG1103 Archaea-specific pyrid 99.8 1.8E-16 3.8E-21 133.7 26.4 336 43-417 14-381 (382)
340 KOG1402 Ornithine aminotransfe 99.8 9.5E-17 2.1E-21 138.9 24.8 339 43-415 58-426 (427)
341 cd01494 AAT_I Aspartate aminot 99.8 6E-18 1.3E-22 142.0 17.3 166 88-268 2-169 (170)
342 TIGR00699 GABAtrns_euk 4-amino 99.8 8.9E-17 1.9E-21 153.6 26.5 343 41-414 55-464 (464)
343 PRK06209 glutamate-1-semialdeh 99.8 2.9E-16 6.3E-21 150.6 27.7 336 41-418 45-407 (431)
344 KOG0053 Cystathionine beta-lya 99.8 3.6E-16 7.9E-21 142.1 26.1 214 88-339 79-298 (409)
345 COG2873 MET17 O-acetylhomoseri 99.8 8E-16 1.7E-20 135.8 26.9 294 86-416 62-425 (426)
346 PLN02452 phosphoserine transam 99.8 8.1E-16 1.8E-20 143.1 28.6 328 44-417 6-364 (365)
347 TIGR03799 NOD_PanD_pyr putativ 99.8 1.6E-15 3.5E-20 147.1 31.6 312 80-409 119-518 (522)
348 PLN02974 adenosylmethionine-8- 99.8 1.6E-15 3.4E-20 153.4 31.9 347 45-414 366-816 (817)
349 PRK15029 arginine decarboxylas 99.8 1.1E-15 2.3E-20 152.3 29.5 236 85-336 204-465 (755)
350 PRK05367 glycine dehydrogenase 99.8 3.1E-15 6.6E-20 153.8 33.2 308 86-419 538-878 (954)
351 PLN02263 serine decarboxylase 99.8 8.3E-15 1.8E-19 138.4 33.5 294 87-417 130-444 (470)
352 PRK04311 selenocysteine syntha 99.8 3.6E-15 7.7E-20 142.7 30.7 324 60-415 96-463 (464)
353 PRK12566 glycine dehydrogenase 99.7 5.9E-15 1.3E-19 148.2 30.3 311 80-418 530-878 (954)
354 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.7E-16 3.6E-21 147.5 17.8 237 87-341 67-326 (417)
355 TIGR00461 gcvP glycine dehydro 99.7 3.5E-14 7.6E-19 143.6 33.9 314 79-419 516-870 (939)
356 TIGR01365 serC_2 phosphoserine 99.7 1.4E-14 2.9E-19 135.0 25.6 313 66-414 19-371 (374)
357 TIGR00474 selA seryl-tRNA(sec) 99.7 1.2E-13 2.7E-18 131.7 31.0 317 60-410 91-453 (454)
358 PRK12462 phosphoserine aminotr 99.7 1.2E-13 2.7E-18 127.1 29.5 325 46-416 5-362 (364)
359 PRK13578 ornithine decarboxyla 99.7 3.8E-14 8.3E-19 139.9 26.1 165 88-267 176-366 (720)
360 PF00282 Pyridoxal_deC: Pyrido 99.7 5.4E-14 1.2E-18 131.8 25.4 269 64-347 54-366 (373)
361 PRK15400 lysine decarboxylase 99.7 6.2E-14 1.4E-18 138.3 26.3 305 88-415 197-558 (714)
362 KOG1358 Serine palmitoyltransf 99.6 1.6E-14 3.4E-19 128.2 18.6 341 42-417 92-466 (467)
363 PF00202 Aminotran_3: Aminotra 99.6 7.7E-15 1.7E-19 136.4 17.8 252 41-310 13-294 (339)
364 PRK15399 lysine decarboxylase 99.6 4.8E-13 1E-17 132.1 28.6 302 88-415 197-558 (713)
365 PF01212 Beta_elim_lyase: Beta 99.6 4.6E-16 1E-20 139.9 6.3 190 62-270 7-208 (290)
366 PLN02414 glycine dehydrogenase 99.6 1.1E-12 2.3E-17 134.7 31.3 299 61-412 116-465 (993)
367 PRK05367 glycine dehydrogenase 99.6 1.3E-12 2.9E-17 134.6 31.7 271 88-411 123-437 (954)
368 COG3844 Kynureninase [Amino ac 99.6 2.2E-12 4.7E-17 112.2 26.2 350 25-419 17-405 (407)
369 TIGR02617 tnaA_trp_ase tryptop 99.6 3.7E-12 8E-17 117.9 27.9 340 43-416 40-441 (467)
370 KOG1383 Glutamate decarboxylas 99.5 5.5E-12 1.2E-16 115.0 25.6 312 86-419 116-449 (491)
371 KOG1403 Predicted alanine-glyo 99.5 1.3E-12 2.8E-17 112.1 19.0 333 61-417 61-438 (452)
372 TIGR03811 tyr_de_CO2_Ent tyros 99.5 7.6E-11 1.7E-15 115.8 33.4 257 62-335 95-475 (608)
373 COG1982 LdcC Arginine/lysine/o 99.5 2.1E-11 4.4E-16 115.9 27.1 237 88-341 72-318 (557)
374 KOG2467 Glycine/serine hydroxy 99.5 2E-11 4.3E-16 107.8 24.4 336 61-415 51-425 (477)
375 COG1003 GcvP Glycine cleavage 99.3 2E-09 4.3E-14 97.7 25.1 314 79-419 95-450 (496)
376 TIGR00461 gcvP glycine dehydro 99.3 1.2E-08 2.7E-13 104.0 30.0 297 61-411 77-426 (939)
377 PLN02994 1-aminocyclopropane-1 99.2 3.2E-11 6.9E-16 97.5 8.1 116 24-145 21-153 (153)
378 PF02347 GDC-P: Glycine cleava 99.2 3.1E-08 6.6E-13 92.7 25.5 273 90-410 114-429 (429)
379 KOG0628 Aromatic-L-amino-acid/ 99.1 1.1E-07 2.4E-12 87.1 27.3 322 82-417 105-472 (511)
380 COG1932 SerC Phosphoserine ami 99.1 8.6E-08 1.9E-12 85.9 24.6 330 44-417 4-364 (365)
381 PF06838 Met_gamma_lyase: Meth 99.1 2E-08 4.4E-13 89.9 18.5 155 116-288 79-249 (403)
382 COG3033 TnaA Tryptophanase [Am 99.0 2.7E-07 5.9E-12 81.9 23.8 314 81-416 74-444 (471)
383 COG1921 SelA Selenocysteine sy 99.0 6.9E-08 1.5E-12 88.2 20.4 223 61-308 38-268 (395)
384 KOG0629 Glutamate decarboxylas 99.0 6.6E-08 1.4E-12 87.6 19.3 315 81-413 132-506 (510)
385 PF05889 SLA_LP_auto_ag: Solub 98.9 8E-07 1.7E-11 81.3 22.5 288 110-415 75-389 (389)
386 KOG1405 4-aminobutyrate aminot 98.8 1.1E-06 2.4E-11 77.9 20.4 218 171-416 254-483 (484)
387 PF03841 SelA: L-seryl-tRNA se 98.8 1.2E-08 2.5E-13 92.4 7.0 251 61-335 17-296 (367)
388 COG0403 GcvP Glycine cleavage 98.8 3.8E-05 8.3E-10 70.4 28.7 337 30-413 62-447 (450)
389 KOG3846 L-kynurenine hydrolase 98.7 1.4E-05 3E-10 69.8 23.7 342 43-418 65-463 (465)
390 COG4100 Cystathionine beta-lya 98.6 2.5E-06 5.4E-11 74.1 16.4 175 80-269 58-249 (416)
391 PRK12566 glycine dehydrogenase 98.5 0.00014 3E-09 74.8 28.4 305 47-411 82-439 (954)
392 KOG2040 Glycine dehydrogenase 98.1 0.00096 2.1E-08 64.4 21.2 303 86-418 578-920 (1001)
393 KOG2790 Phosphoserine aminotra 97.6 0.013 2.9E-07 51.1 17.8 329 43-417 5-369 (370)
394 KOG3843 Predicted serine hydro 97.6 0.00072 1.6E-08 58.1 9.8 155 103-259 70-230 (432)
395 PLN02672 methionine S-methyltr 96.6 0.088 1.9E-06 56.0 16.4 230 22-269 367-615 (1082)
396 KOG2040 Glycine dehydrogenase 90.4 21 0.00045 35.8 24.0 244 131-411 203-478 (1001)
397 COG2102 Predicted ATPases of P 88.0 5.9 0.00013 33.9 9.4 99 111-219 3-116 (223)
398 KOG1465 Translation initiation 80.7 43 0.00093 30.2 12.7 105 108-222 161-271 (353)
399 KOG1467 Translation initiation 80.1 28 0.0006 33.6 10.9 132 85-226 324-473 (556)
400 PRK10595 SOS cell division inh 76.2 42 0.00091 27.5 10.5 101 111-217 30-136 (164)
401 COG0552 FtsY Signal recognitio 75.5 19 0.0004 33.2 8.2 106 117-226 151-271 (340)
402 PF05368 NmrA: NmrA-like famil 75.2 22 0.00047 31.0 8.8 91 117-219 7-98 (233)
403 COG1105 FruK Fructose-1-phosph 74.4 34 0.00075 31.3 9.7 58 167-226 108-170 (310)
404 TIGR03573 WbuX N-acetyl sugar 70.3 51 0.0011 30.9 10.3 125 89-231 43-176 (343)
405 COG0296 GlgB 1,4-alpha-glucan 70.3 6.1 0.00013 39.8 4.3 42 188-232 203-244 (628)
406 TIGR00623 sula cell division i 70.2 60 0.0013 26.7 9.9 103 110-217 33-140 (168)
407 cd06568 GH20_SpHex_like A subg 70.0 11 0.00023 35.1 5.7 67 149-219 26-92 (329)
408 PF04392 ABC_sub_bind: ABC tra 69.3 36 0.00079 30.9 9.1 142 64-219 14-164 (294)
409 cd02742 GH20_hexosaminidase Be 68.1 12 0.00027 34.3 5.7 66 149-219 24-89 (303)
410 PRK05678 succinyl-CoA syntheta 67.1 25 0.00055 31.9 7.3 50 171-226 78-127 (291)
411 TIGR00290 MJ0570_dom MJ0570-re 64.7 93 0.002 27.1 10.0 98 112-219 4-115 (223)
412 cd06562 GH20_HexA_HexB-like Be 63.7 14 0.0003 34.7 5.2 60 151-219 28-87 (348)
413 cd06570 GH20_chitobiase-like_1 62.2 17 0.00038 33.4 5.4 58 151-219 28-85 (311)
414 PRK04296 thymidine kinase; Pro 60.9 60 0.0013 27.3 8.2 97 118-227 16-118 (190)
415 KOG2741 Dimeric dihydrodiol de 59.6 42 0.00092 31.0 7.2 76 140-226 58-133 (351)
416 PF01902 ATP_bind_4: ATP-bindi 59.6 70 0.0015 27.7 8.4 98 112-219 4-115 (218)
417 PRK13125 trpA tryptophan synth 58.8 94 0.002 27.4 9.3 85 121-211 89-180 (244)
418 PF13460 NAD_binding_10: NADH( 58.1 66 0.0014 26.5 8.0 89 112-216 1-90 (183)
419 PRK08265 short chain dehydroge 57.1 1.1E+02 0.0024 27.0 9.8 55 110-164 7-61 (261)
420 COG1184 GCD2 Translation initi 56.5 1.6E+02 0.0035 26.9 11.0 107 108-225 118-232 (301)
421 PRK10886 DnaA initiator-associ 56.2 1E+02 0.0022 26.2 8.7 41 174-221 102-142 (196)
422 PLN02591 tryptophan synthase 55.7 1.4E+02 0.0031 26.5 9.8 158 42-220 28-194 (250)
423 TIGR01019 sucCoAalpha succinyl 55.3 53 0.0011 29.8 7.2 50 171-226 76-125 (286)
424 TIGR00289 conserved hypothetic 55.2 1E+02 0.0022 26.8 8.6 98 112-219 4-115 (222)
425 PF03652 UPF0081: Uncharacteri 54.3 47 0.001 26.2 6.0 58 169-226 37-99 (135)
426 TIGR02717 AcCoA-syn-alpha acet 53.8 1.2E+02 0.0026 29.6 9.9 57 171-228 77-134 (447)
427 PRK14454 ribosomal RNA large s 53.0 1.9E+02 0.0041 27.1 10.7 49 171-220 268-320 (342)
428 TIGR01470 cysG_Nterm siroheme 52.1 1.5E+02 0.0033 25.3 10.7 96 108-224 8-104 (205)
429 PLN00191 enolase 51.7 83 0.0018 30.8 8.3 98 117-221 296-394 (457)
430 KOG1201 Hydroxysteroid 17-beta 50.5 1.5E+02 0.0032 27.0 8.9 98 107-210 36-144 (300)
431 COG1091 RfbD dTDP-4-dehydrorha 50.5 1E+02 0.0022 27.8 8.1 98 171-271 38-155 (281)
432 PF02662 FlpD: Methyl-viologen 50.0 74 0.0016 24.7 6.3 48 168-215 38-90 (124)
433 PF00290 Trp_syntA: Tryptophan 47.9 1.1E+02 0.0025 27.2 7.9 153 42-215 36-197 (259)
434 COG1435 Tdk Thymidine kinase [ 47.7 81 0.0017 26.7 6.5 103 116-226 15-121 (201)
435 cd06569 GH20_Sm-chitobiase-lik 47.4 40 0.00088 32.8 5.5 70 150-219 31-114 (445)
436 KOG2774 NAD dependent epimeras 46.1 2.1E+02 0.0045 25.1 8.8 72 146-228 93-164 (366)
437 COG0352 ThiE Thiamine monophos 45.8 56 0.0012 28.1 5.5 51 172-224 24-74 (211)
438 CHL00200 trpA tryptophan synth 45.4 2E+02 0.0043 25.8 9.1 95 121-220 107-207 (263)
439 PF07745 Glyco_hydro_53: Glyco 45.2 1.5E+02 0.0033 27.6 8.6 80 146-232 8-88 (332)
440 cd06563 GH20_chitobiase-like T 45.1 44 0.00096 31.5 5.3 69 151-219 28-103 (357)
441 smart00642 Aamy Alpha-amylase 45.1 27 0.00059 28.7 3.5 26 201-226 69-94 (166)
442 PF04016 DUF364: Domain of unk 44.6 74 0.0016 25.6 5.8 76 131-214 9-88 (147)
443 COG4050 Uncharacterized protei 43.9 83 0.0018 23.9 5.3 43 367-420 108-150 (152)
444 PLN02955 8-amino-7-oxononanoat 43.4 3.4E+02 0.0073 26.8 11.0 133 80-226 110-261 (476)
445 PTZ00081 enolase; Provisional 43.3 1.3E+02 0.0029 29.2 8.2 97 117-221 282-382 (439)
446 TIGR02104 pulA_typeI pullulana 42.1 25 0.00053 35.9 3.3 26 202-227 229-254 (605)
447 PF14258 DUF4350: Domain of un 41.5 1.1E+02 0.0024 20.6 6.1 60 146-221 10-70 (70)
448 COG0816 Predicted endonuclease 41.5 98 0.0021 24.7 5.9 57 170-226 40-100 (141)
449 COG0826 Collagenase and relate 41.0 76 0.0017 29.7 6.1 46 171-216 15-63 (347)
450 PF03460 NIR_SIR_ferr: Nitrite 40.9 20 0.00044 24.2 1.8 27 188-215 11-37 (69)
451 PRK06194 hypothetical protein; 40.7 2.6E+02 0.0056 24.9 9.6 65 110-179 7-74 (287)
452 COG1066 Sms Predicted ATP-depe 40.6 2.3E+02 0.005 27.3 8.9 110 106-220 89-215 (456)
453 PF02702 KdpD: Osmosensitive K 40.5 1.1E+02 0.0024 26.1 6.3 99 116-219 16-120 (211)
454 PF01408 GFO_IDH_MocA: Oxidore 40.4 97 0.0021 23.3 5.8 21 200-220 98-118 (120)
455 PRK11070 ssDNA exonuclease Rec 40.2 3.2E+02 0.0069 27.8 10.6 100 115-224 52-160 (575)
456 cd03313 enolase Enolase: Enola 40.1 1.1E+02 0.0023 29.5 7.1 93 119-219 264-360 (408)
457 COG0074 SucD Succinyl-CoA synt 39.6 1.4E+02 0.0031 26.8 7.1 82 134-225 45-126 (293)
458 PF00265 TK: Thymidine kinase; 39.1 79 0.0017 26.3 5.3 110 116-238 12-124 (176)
459 KOG3974 Predicted sugar kinase 38.8 1E+02 0.0022 27.4 5.9 69 147-223 70-140 (306)
460 PRK00077 eno enolase; Provisio 38.7 1.3E+02 0.0029 29.1 7.5 92 120-219 265-360 (425)
461 PF10087 DUF2325: Uncharacteri 38.7 1.5E+02 0.0033 21.6 8.0 68 144-221 13-81 (97)
462 PF02571 CbiJ: Precorrin-6x re 38.5 1.4E+02 0.0031 26.5 7.1 93 111-219 2-97 (249)
463 COG2984 ABC-type uncharacteriz 38.0 3.3E+02 0.0071 25.1 11.5 143 64-225 45-198 (322)
464 PF04321 RmlD_sub_bind: RmlD s 37.8 1.6E+02 0.0035 26.6 7.7 56 171-226 39-107 (286)
465 PRK00278 trpC indole-3-glycero 37.8 95 0.0021 27.7 6.0 49 167-221 118-166 (260)
466 PF13407 Peripla_BP_4: Peripla 37.7 60 0.0013 28.5 4.8 65 147-220 21-85 (257)
467 PRK03170 dihydrodipicolinate s 37.4 1.4E+02 0.003 27.2 7.2 48 166-214 15-66 (292)
468 PLN03244 alpha-amylase; Provis 36.1 56 0.0012 34.1 4.6 33 197-229 436-468 (872)
469 cd00951 KDGDH 5-dehydro-4-deox 36.0 1.6E+02 0.0034 26.8 7.3 52 167-219 15-73 (289)
470 PRK13937 phosphoheptose isomer 35.8 2.6E+02 0.0057 23.4 8.2 36 178-220 103-138 (188)
471 TIGR02012 tigrfam_recA protein 35.7 1.5E+02 0.0033 27.4 7.0 22 367-388 268-289 (321)
472 PF03748 FliL: Flagellar basal 35.6 42 0.00091 24.5 2.9 52 63-115 43-94 (99)
473 cd01018 ZntC Metal binding pro 35.6 1.1E+02 0.0024 27.4 6.2 74 132-220 169-245 (266)
474 PTZ00187 succinyl-CoA syntheta 35.3 1.7E+02 0.0036 27.1 7.1 78 139-226 73-151 (317)
475 PF00128 Alpha-amylase: Alpha 35.2 33 0.00071 31.1 2.8 28 201-228 51-78 (316)
476 cd00950 DHDPS Dihydrodipicolin 34.9 1.6E+02 0.0034 26.6 7.1 47 167-214 15-65 (284)
477 cd00408 DHDPS-like Dihydrodipi 34.6 1.4E+02 0.0031 26.8 6.8 63 157-220 2-71 (281)
478 COG0505 CarA Carbamoylphosphat 34.4 1.4E+02 0.003 27.9 6.4 69 132-212 178-248 (368)
479 PRK10076 pyruvate formate lyas 34.3 3E+02 0.0066 23.7 8.4 163 26-220 20-211 (213)
480 PF03786 UxuA: D-mannonate deh 34.0 80 0.0017 29.5 4.9 39 182-220 25-63 (351)
481 KOG2865 NADH:ubiquinone oxidor 33.3 2.9E+02 0.0064 25.2 8.0 86 126-216 78-169 (391)
482 PF04748 Polysacc_deac_2: Dive 33.0 2.7E+02 0.0058 24.0 7.8 118 88-219 73-206 (213)
483 PRK04210 phosphoenolpyruvate c 32.8 5E+02 0.011 26.3 10.2 87 88-180 10-107 (601)
484 cd00532 MGS-like MGS-like doma 32.7 2.2E+02 0.0047 21.5 10.1 90 124-222 16-106 (112)
485 PF00106 adh_short: short chai 32.7 2.5E+02 0.0055 22.3 8.2 94 112-210 3-110 (167)
486 cd01020 TroA_b Metal binding p 32.7 1.4E+02 0.0031 26.6 6.4 79 132-219 152-236 (264)
487 TIGR00064 ftsY signal recognit 32.7 3.2E+02 0.007 24.6 8.6 46 177-223 149-201 (272)
488 PF13872 AAA_34: P-loop contai 32.7 34 0.00074 31.1 2.3 27 202-228 159-186 (303)
489 PRK08263 short chain dehydroge 32.6 3.2E+02 0.0069 24.2 8.8 53 111-163 5-57 (275)
490 TIGR03679 arCOG00187 arCOG0018 32.5 3.3E+02 0.0071 23.5 9.2 96 113-218 2-115 (218)
491 TIGR00288 conserved hypothetic 31.9 2.9E+02 0.0062 22.6 7.7 69 141-220 66-134 (160)
492 COG2099 CobK Precorrin-6x redu 31.6 2.6E+02 0.0055 24.9 7.3 94 111-219 4-97 (257)
493 PRK15452 putative protease; Pr 31.5 1.3E+02 0.0028 29.3 6.2 44 135-179 5-52 (443)
494 COG0373 HemA Glutamyl-tRNA red 31.3 2.9E+02 0.0063 26.7 8.2 89 117-223 185-274 (414)
495 COG2515 Acd 1-aminocyclopropan 31.3 4.2E+02 0.009 24.3 9.3 105 109-213 63-177 (323)
496 PRK07226 fructose-bisphosphate 31.3 1.4E+02 0.0031 26.7 6.1 47 172-220 96-144 (267)
497 PLN00125 Succinyl-CoA ligase [ 31.2 1.3E+02 0.0029 27.4 5.9 78 139-226 54-132 (300)
498 TIGR03649 ergot_EASG ergot alk 31.2 3.8E+02 0.0083 23.9 9.1 42 171-216 50-97 (285)
499 cd01994 Alpha_ANH_like_IV This 31.1 3.3E+02 0.0071 23.0 9.0 98 112-219 3-118 (194)
500 PRK06180 short chain dehydroge 31.1 3.6E+02 0.0078 23.9 8.9 30 111-140 6-35 (277)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.2e-64 Score=437.46 Aligned_cols=409 Identities=58% Similarity=1.084 Sum_probs=388.8
Q ss_pred ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631 10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL 89 (421)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 89 (421)
|.|..+ +..++.+.+++|.+...+..-.+...+.++|.+++|+|+.+++++..+.+.+|+.+.+..+..++|+|+.|+.
T Consensus 28 W~f~gs-~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~ 106 (447)
T KOG0259|consen 28 WRFKGS-DAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGIL 106 (447)
T ss_pred eeeccc-hhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccH
Confidence 999999 6666677899999999888888777677999999999999999999999999999999999899999999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
..|+++|+|+++...-..++++|++|+|.++|++.++.+|.+||-.|+++.|+|+-|...+...|.+++++.+.++.+|.
T Consensus 107 ~AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~we 186 (447)
T KOG0259|consen 107 PARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWE 186 (447)
T ss_pred HHHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCcccce
Confidence 99999999999888878899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+|++.++.+++++|.++++.||+||+|.+++.+-|++|++.|+++++++|.||+|..+.|++.++.++..+....+++.+
T Consensus 187 IDL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitl 266 (447)
T KOG0259|consen 187 IDLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITL 266 (447)
T ss_pred echHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988899999
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (421)
+|+||.|..||||+||++..|+.+++.+..+.+.+++.......|+++.|.|+...|+...+++++.....++.+.+..+
T Consensus 267 ggisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y 346 (447)
T KOG0259|consen 267 GGISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCY 346 (447)
T ss_pred cccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999887788899998887789999999999999998889999999999999999999
Q ss_pred HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631 330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+.|+++|++.|...|++.+|+|+.++..-++.+.++.+|+.+|.+|+.+.+.||..|+.++|+|++++.+.+.+++++++
T Consensus 347 ~~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~R 426 (447)
T KOG0259|consen 347 SRLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSR 426 (447)
T ss_pred HHHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHH
Confidence 99999999998889999999999998877777788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhh
Q 014631 410 IKAFCQRHAK 419 (421)
Q Consensus 410 l~~~~~~~~~ 419 (421)
|+++..++.+
T Consensus 427 ik~Fc~RH~~ 436 (447)
T KOG0259|consen 427 IKEFCDRHSK 436 (447)
T ss_pred HHHHHHhhhh
Confidence 9999988764
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.3e-60 Score=455.28 Aligned_cols=415 Identities=67% Similarity=1.210 Sum_probs=356.0
Q ss_pred ccccccCCCchhHHhhhhhhhHHHHHHHHHHhccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC
Q 014631 6 VKKKWGFQVKQEHITATATLTVRSALTIIKQNLKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP 84 (421)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~ 84 (421)
....|.|..++..+.+.....++..+......++... +.++|+|++|+|+..+.+++++.+.+++.+.+.....+.|++
T Consensus 13 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~ 92 (430)
T PLN00145 13 ATARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYST 92 (430)
T ss_pred ccccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCC
Confidence 3456999999544565566778888777766665553 789999999999988888999999999999988765568999
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
..|++++|+++++++++.+|.++++++|++|+|+++++.+++..+.++||+|++++|+|+.|...+...|++++.+++.+
T Consensus 93 ~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~ 172 (430)
T PLN00145 93 CVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLP 172 (430)
T ss_pred CccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCc
Confidence 99999999999999999888889999999999999999999999999999999999999999999999999999999877
Q ss_pred CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
+++|.+|+++++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++..+.++..++..+
T Consensus 173 ~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~ 252 (430)
T PLN00145 173 ERGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVA 252 (430)
T ss_pred ccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccC
Confidence 77899999999999988999999999999999999999999999999999999999999999988776555665566667
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
++++++||||.|++||+|+||++++++..+....++.+.++.......+++.+.|.++..+|+...+.++++.++.++++
T Consensus 253 ~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~ 332 (430)
T PLN00145 253 PVLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKET 332 (430)
T ss_pred cEEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 89999999999999999999999866544432223445555555444467889999999999754468899999999999
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE 404 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~ 404 (421)
++.+.+.|++++++.++..|++++|+|++++....++..++.+++.++++++||.+.||..|+..+++||+++.+.++++
T Consensus 333 ~~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~ 412 (430)
T PLN00145 333 ADICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLE 412 (430)
T ss_pred HHHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHH
Confidence 99999999998888754579999999999875322222256788888999999999999999988999999999899999
Q ss_pred HHHHHHHHHHHHhhhc
Q 014631 405 EGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~~ 420 (421)
+++++|.+++.++.++
T Consensus 413 ~al~rl~~~~~~~~~~ 428 (430)
T PLN00145 413 DGLERLKSFCLRHAKL 428 (430)
T ss_pred HHHHHHHHHHHHhccc
Confidence 9999999999988765
No 3
>PLN02187 rooty/superroot1
Probab=100.00 E-value=3e-59 Score=450.19 Aligned_cols=409 Identities=51% Similarity=1.015 Sum_probs=347.4
Q ss_pred ccccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC
Q 014631 8 KKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVG 87 (421)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g 87 (421)
..|.|..+ .........+||.+...+.+.++++.++++|+|++|+|+..+.+.+++.+.+++.+.+..+....|++..|
T Consensus 31 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G 109 (462)
T PLN02187 31 SVWRFGGS-DKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAG 109 (462)
T ss_pred cccccCcc-hhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCC
Confidence 44999998 66777777899999888876676677899999999999987777888999999999888765568999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
++++|+++|+|+++.++.++++++|++|+|+++++..++.++++|||+|++++|+|+.|...+...|++++.+++.++++
T Consensus 110 ~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~ 189 (462)
T PLN02187 110 ILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKE 189 (462)
T ss_pred hHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccC
Confidence 99999999999999888889999999999999999999999999999999999999999999999999999999876678
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 247 (421)
|++|+++++++++++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.|++..+.++..++...+++
T Consensus 190 ~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi 269 (462)
T PLN02187 190 WEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVL 269 (462)
T ss_pred CccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEE
Confidence 99999999999888899999999999999999999999999999999999999999999988776555555555445799
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
+++||||.|++||+|+||++++++.... ++++.+.... ....+++.+.|.++..+|+...+.++++.++.++++
T Consensus 270 ~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~ 346 (462)
T PLN02187 270 TLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHN 346 (462)
T ss_pred EEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 9999999999999999999986543221 1223443333 223356889999999999754468899999999999
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE 404 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~ 404 (421)
++.+.+.|++++++.++..|++|+|+|++++.....+..++.+++.++++++||.+.||..|+..+++||+++.++++++
T Consensus 347 r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~~e~l~ 426 (462)
T PLN02187 347 VDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVEAHMLE 426 (462)
T ss_pred HHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCCHHHHH
Confidence 99999999988655434478899999998864211112246678888889999999999999888999999998899999
Q ss_pred HHHHHHHHHHHHhhhc
Q 014631 405 EGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~~ 420 (421)
+++++|.++++++.++
T Consensus 427 ~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 427 DALERLKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHHHHHHhhhc
Confidence 9999999999887654
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-59 Score=441.41 Aligned_cols=357 Identities=29% Similarity=0.523 Sum_probs=319.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~al 122 (421)
.++|+|++|+|+ ++.|+.+.+++.+.+..+.. .|.+..|+++||++|++++.+++|...++++ |++|+|+++|+
T Consensus 28 ~~vi~l~iG~Pd----~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEPD----FPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEEeCCCCCC----CCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHH
Confidence 689999999987 68999999999999988643 6779999999999999999999998888877 99999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
.+++.++++|||+|++++|.|..|.......|++++.+++..+ ++|.+|+|++++.+.+++|++++++||||||.++++
T Consensus 103 ~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~ 182 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSK 182 (393)
T ss_pred HHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCH
Confidence 9999999999999999999999999999999999999998655 489999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|++||++||+||+|..+.|++..+.++..+.. .+++|.+.||||.|+++|||+||+++++ +++
T Consensus 183 ~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~-------~~l 255 (393)
T COG0436 183 EELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPP-------EEL 255 (393)
T ss_pred HHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEecccccccccccceeEeecCh-------HHH
Confidence 99999999999999999999999999999864555555544 5789999999999999999999999963 357
Q ss_pred HHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 281 VDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
.+.+.... ....+++.+.|.++.++|+... ....+..++.++++++.+.+.|.+++|+.+...|++++|+|+.++..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~~~~p~Ga~Y~~~~i~~~- 334 (393)
T COG0436 256 IAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPEL- 334 (393)
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccCCCeeEEEEeecCCC-
Confidence 77776554 3456899999999999998643 35778888999999999999999998898664489999999999854
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++.+|+.+|+++.||.+.||+.|+.. +++|+|++.+.+++++++++|.++++..
T Consensus 335 ----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 335 ----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLARFLAEY 392 (393)
T ss_pred ----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHHHHHhc
Confidence 278999999999999999999999975 7999999988899999999999998764
No 5
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=4.4e-57 Score=431.69 Aligned_cols=396 Identities=65% Similarity=1.149 Sum_probs=335.1
Q ss_pred hHHHHHHHHHHhc-cccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631 26 TVRSALTIIKQNL-KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELP 104 (421)
Q Consensus 26 ~~~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~ 104 (421)
.|+..+..+++.+ .+..+.++|+|++|+|...+.+++++.+.+++.+.+.......|++..|.+++|++++++++..+|
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g 91 (409)
T PLN02656 12 TIKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLP 91 (409)
T ss_pred hhhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 3667666666555 445789999999999986666788999999999988876566899999999999999999999888
Q ss_pred CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631 105 CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV 184 (421)
Q Consensus 105 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~ 184 (421)
..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|++++.+++.+++++.+|++++++.++++++
T Consensus 92 ~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~ 171 (409)
T PLN02656 92 YKLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTV 171 (409)
T ss_pred CCCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCce
Confidence 88999999999999999999999999999999999999999988888999999999987666788999999998888899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 264 (421)
++++++|+||||.+++.+++++|+++|+++|++||+||+|.++.+++....++..++..+++|+++||||.|+++|+|+|
T Consensus 172 ~v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG 251 (409)
T PLN02656 172 ALVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLG 251 (409)
T ss_pred EEEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEE
Confidence 99999999999999999999999999999999999999999998877554555555556689999999999999999999
Q ss_pred EEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 265 WLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
|++++++..+...+++++.+........+++.+.|.++..+|+...+.++++.+++++++++.+.+.|++++++..+..|
T Consensus 252 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p 331 (409)
T PLN02656 252 WFVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKP 331 (409)
T ss_pred EEEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCC
Confidence 99996543322224577777665443446788999999999975446788999999999999999999987655423478
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhcC
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQQ 421 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~~ 421 (421)
++|+|+|++++.....+..++.+++.++++++||.+.||+.|+..+++||+++.+++++++++.+|++++.++..+|
T Consensus 332 ~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~~ 408 (409)
T PLN02656 332 EGSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKTQ 408 (409)
T ss_pred CeEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999986421111113556777788899999999999988899999999889999999999999998887654
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-56 Score=426.32 Aligned_cols=394 Identities=66% Similarity=1.160 Sum_probs=325.9
Q ss_pred HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC
Q 014631 27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106 (421)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~ 106 (421)
|+..+..+++.+....++++|+|+.|+|..+..+++|+.+.+++.+.++......|++..|.+++|+++++|+++.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 33334444444455568999999999987555578999999999999887655679999999999999999999988888
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i 186 (421)
+++++|++|+|+++++.+++++++++||.|++++|+|+.+...+...|.+++.+++.++++|.+|++++++++.++++.+
T Consensus 95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 174 (409)
T PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174 (409)
T ss_pred CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence 99999999999999999999999999999999999999999999999999999988666778899999999888888999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL 266 (421)
Q Consensus 187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 266 (421)
++++||||||.+++.+++++|+++|++||++||+||+|.++.+++....++..++..+++++++||||.|+++|+|+||+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence 99999999999999999999999999999999999999999887654445555555568999999999999999999999
Q ss_pred EeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 267 VTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++++....+..++.+.+.........++.+.|.++..+|+.....++++.+++++++++.+.+.|.++++..+...|++
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~g 334 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEG 334 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCe
Confidence 98654322211123444444433223457789999999997544678899999999999999999998755442346889
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
|+|+|++++....++..++.+++.++++++||.+.||..|+..+++||+++.+.+++++++++|.++++++.++
T Consensus 335 g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 335 AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 99999999742111112466787788889999999999998889999999988999999999999999887653
No 7
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=5.1e-54 Score=410.37 Aligned_cols=402 Identities=53% Similarity=1.000 Sum_probs=337.3
Q ss_pred ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631 10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL 89 (421)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 89 (421)
|.|.-+ .|.++. .++|+++...+++.. ..+.++++|+.|.|...+.+++++.+.+++.+.+.......|++..|..
T Consensus 1 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~ 76 (403)
T TIGR01265 1 WNFKGS-DHAKKT-VNPIRAIVDNLKVKP--NPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGAL 76 (403)
T ss_pred CCCchH-HHHHHH-HHHHHHHHHHHHHHH--hcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCH
Confidence 566666 556655 588999888777653 2368999999999986667888999999999988765556898899999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
++|++++++++..++..+++++|++|+|+++++.+++.++.++||+|++++|+|..+...+...|.+++.++++++++++
T Consensus 77 ~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 156 (403)
T TIGR01265 77 AAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWE 156 (403)
T ss_pred HHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCc
Confidence 99999999999877877889999999999999999999999999999999999999999999999999999886666788
Q ss_pred CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+|++++++.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+++.+++....++..++...++|++
T Consensus 157 ~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 236 (403)
T TIGR01265 157 IDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSL 236 (403)
T ss_pred cCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEE
Confidence 99999999888889999999999999999999999999999999999999999999998877555566666666679999
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (421)
+||||.|++||+|+||++++++..++. .++.+.+........+++.++|.++..++....+.++++.+++++++++.+.
T Consensus 237 ~S~SK~~~~pGlRiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 315 (403)
T TIGR01265 237 GGISKRWVVPGWRLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCY 315 (403)
T ss_pred eecccccCCCcceEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999865432221 1244545444433346788999999999975456788999999999999999
Q ss_pred HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631 330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+.|+.++++. +..|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+..+++|+|++.+++++++++++
T Consensus 316 ~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~ 394 (403)
T TIGR01265 316 EELKDIPGLV-CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSR 394 (403)
T ss_pred HHHhcCCCce-ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHH
Confidence 9999887876 457999999999997532111124677888878889999999999988899999999888999999999
Q ss_pred HHHHHHHh
Q 014631 410 IKAFCQRH 417 (421)
Q Consensus 410 l~~~~~~~ 417 (421)
|.++++++
T Consensus 395 l~~~~~~~ 402 (403)
T TIGR01265 395 IKEFCERH 402 (403)
T ss_pred HHHHHHhc
Confidence 99998654
No 8
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=5.4e-54 Score=410.43 Aligned_cols=400 Identities=37% Similarity=0.760 Sum_probs=329.6
Q ss_pred ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631 10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL 89 (421)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 89 (421)
|.++.+ .|.+.. .++++.+....+.+. +.+.++++|+.|.|.....+++++.+.+++.+.+.......|++..|..
T Consensus 1 ~~~~~~-~~~~~~-~~~~~~~~~~~~~~~--~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~ 76 (401)
T TIGR01264 1 WSVKPS-DHSKNT-VNPIRAIVDNMKVKP--NPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGAL 76 (401)
T ss_pred CCcChH-HHHhhh-hhHHHHHHHHHHhhh--hcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCH
Confidence 677777 555554 355888777666433 3467899999999864344678899999999988765456799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
++|+++++++++. +..+++++|++|+|+++++.+++.+++++||+|++++|+|..+...++..|++++.++++.+++++
T Consensus 77 ~lr~aia~~~~~~-~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~ 155 (401)
T TIGR01264 77 SAREAIASYYHNP-DGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWE 155 (401)
T ss_pred HHHHHHHHHHhhc-CCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCC
Confidence 9999999999874 556889999999999999999999999999999999999999999999999999999887666788
Q ss_pred CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+|++.+++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++|++
T Consensus 156 ~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~ 235 (401)
T TIGR01264 156 IDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSC 235 (401)
T ss_pred CCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEE
Confidence 99999999888788999999999999999999999999999999999999999999998877555555556554468999
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (421)
+||||.|+++|+|+||++++++.... .++++.+........+++.+.|.++..+|....+.++++.++.++++++.+.
T Consensus 236 ~SfSK~~~~~GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~ 313 (401)
T TIGR01264 236 GGLAKRWLVPGWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCY 313 (401)
T ss_pred ccCcccCCCccceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999987532211 2345555544332346788999999999875446888999999999999999
Q ss_pred HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631 330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+.|++++++. +..|.+|+|+|++++....++..++.+++..+++++||.+.||..|+..+++|++++.+++++++++++
T Consensus 314 ~~L~~~~~~~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~r 392 (401)
T TIGR01264 314 GALAAVPGLR-PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSR 392 (401)
T ss_pred HHHHhCCCCc-ccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHH
Confidence 9999987876 457999999999986421111224677888887789999999999987899999999889999999999
Q ss_pred HHHHHHHh
Q 014631 410 IKAFCQRH 417 (421)
Q Consensus 410 l~~~~~~~ 417 (421)
|.++++++
T Consensus 393 l~~~~~~~ 400 (401)
T TIGR01264 393 IQEFCERH 400 (401)
T ss_pred HHHHHhcc
Confidence 99998764
No 9
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=2.4e-53 Score=406.64 Aligned_cols=375 Identities=38% Similarity=0.677 Sum_probs=316.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC------CCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL------PCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~------~~~~~~~~i~~~ 115 (421)
.+.++|+|+.|.|+..+.+.+++.+.+++.+.+.......|++..|.++||+++++|+++.+ |..+++++|++|
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it 110 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLC 110 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEe
Confidence 58899999999988554456789999999998876555689999999999999999998754 456889999999
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
+|+++++.+++.+++++||+|+++.|+|..+...++..|++++.++.++++++++|++++++.+.++++++++++|||||
T Consensus 111 ~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPt 190 (412)
T PTZ00433 111 SGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPC 190 (412)
T ss_pred CChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCC
Confidence 99999999999999999999999999999999999999999999998766678899999999888889999999999999
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 275 (421)
|.+++.+++++|+++|+++|++||+||+|.++.+++....++..++...++++++||||.|+++|+|+||++++++....
T Consensus 191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~~ 270 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGNG 270 (412)
T ss_pred CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCcccH
Confidence 99999999999999999999999999999999887654445555554446899999999999999999999984332111
Q ss_pred hHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC
Q 014631 276 QELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN 355 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 355 (421)
+++++.+........+++.+.|.++..++....+.++++.++.++++++.+.+.|+++.++. +..|++|+|+|++++
T Consensus 271 --~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l~ 347 (412)
T PTZ00433 271 --GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLMSRLD 347 (412)
T ss_pred --HHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEEEEec
Confidence 34666666654433468889999999888754467889999999999999999999866777 557899999999987
Q ss_pred cccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.....+..++.+++..+++++||.+.||..|+..+++|++++.+++++++++++|.++++++++
T Consensus 348 ~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 348 LEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK 411 (412)
T ss_pred hhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 4211111135678888877789999999999888999999998899999999999999987653
No 10
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=2.8e-53 Score=416.07 Aligned_cols=398 Identities=23% Similarity=0.443 Sum_probs=321.0
Q ss_pred ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631 10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL 89 (421)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 89 (421)
|-+..+ ..+..+..+.++.+....++. +..|.++|+|+.|+|..+ ++++|+.+.+++.+.+.. ...|++..|++
T Consensus 115 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~ 188 (517)
T PRK13355 115 RTFKKS-HKLDNVLYDVRGPVVDEANRM--EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF 188 (517)
T ss_pred cCCChh-HHhhccCccHHHHHHHHHHHH--HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence 445555 566666666665565555432 335889999999998632 357788999999888764 35799999999
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
+||++|++|++.+.+.++++++|++|+|+++++.+++.+++++||+|++++|+|..|...+...|++++.++.+++++|.
T Consensus 189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~ 268 (517)
T PRK13355 189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY 268 (517)
T ss_pred HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence 99999999998876666899999999999999999999999999999999999999999999999999999987777899
Q ss_pred CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+|++++++.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++....++..+..+..++++
T Consensus 269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~ 348 (517)
T PRK13355 269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF 348 (517)
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence 99999999998899999999999999999999999999999999999999999999999877555555555444457778
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADI 327 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~ 327 (421)
+||||.|+++|+|+||++++.+.... +++.+.+........+.+.++|.++..+|.... ..++.+. +++.++++.
T Consensus 349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~ 425 (517)
T PRK13355 349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQREL 425 (517)
T ss_pred ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHH
Confidence 99999999999999999975432211 124444443333334678899999999886421 3455544 344566899
Q ss_pred HHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHH
Q 014631 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEE 405 (421)
Q Consensus 328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~ 405 (421)
+.+.|+++||+. +..|++++|+|++++.... +..++.+++..+++++||.+.||..|+. ++++|++++.+++++++
T Consensus 426 l~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~ 503 (517)
T PRK13355 426 VYNALNAIPGIS-AVKPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLED 503 (517)
T ss_pred HHHHHhcCCCcc-cCCCCeeeEEEeecCcccC-CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHH
Confidence 999999988988 5589999999998874211 1124667888888999999999999963 68999999999999999
Q ss_pred HHHHHHHHHHHhh
Q 014631 406 GLGRIKAFCQRHA 418 (421)
Q Consensus 406 ~~~~l~~~~~~~~ 418 (421)
++++|.+++++++
T Consensus 504 a~~rl~~~~~~~~ 516 (517)
T PRK13355 504 AMDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998664
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=8.3e-53 Score=404.20 Aligned_cols=374 Identities=24% Similarity=0.384 Sum_probs=305.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+.++++++.|+|..+ .+++|+.+.+++.+.+.......|++..|.++||+++++|+++.+|+.+++++|++|+|++++
T Consensus 30 ~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~a 108 (433)
T PRK06855 30 LGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDA 108 (433)
T ss_pred ccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHH
Confidence 4778999999998532 368899999999988766555689999999999999999999988999999999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCCCCCcccc
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~ 198 (421)
+.+++. ++++||.|++++|+|+.+.... ...|.+++.++++++++|++|++++++.+. ++++++++++||||||.+
T Consensus 109 l~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~ 187 (433)
T PRK06855 109 IAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAV 187 (433)
T ss_pred HHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcC
Confidence 999985 7799999999999999876543 456888888888766778899999999886 357889999999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
+|.+++++|+++|++||++||+||+|.++.|.+..+.++..+..+.++|+++||||.|++||+|+||++++++.......
T Consensus 188 ~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~~ 267 (433)
T PRK06855 188 YPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVFK 267 (433)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHHH
Confidence 99999999999999999999999999999887755556555544446799999999999999999999985321100001
Q ss_pred HHHHHHhhhcccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
.+.+.+........+++.+.|.++..+++... +.++++.++.++++++.+.+.|++++++. +..|.+|+|+|++++..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~~ 346 (433)
T PRK06855 268 KYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFEDG 346 (433)
T ss_pred HHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeeccccc
Confidence 23444433332334678899999999997643 67889999999999999999999887877 55899999999999853
Q ss_pred cc--------c-------------C-CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHH
Q 014631 358 LL--------E-------------G-ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAF 413 (421)
Q Consensus 358 ~~--------~-------------~-~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~ 413 (421)
.. . + ..++.+++..+++++||.+.||..|+. ..++|+|++ .+++++++++++|.++
T Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~~ 426 (433)
T PRK06855 347 VLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAEK 426 (433)
T ss_pred cccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHHH
Confidence 10 0 0 013567888888999999999999965 357999999 5899999999999999
Q ss_pred HHHhh
Q 014631 414 CQRHA 418 (421)
Q Consensus 414 ~~~~~ 418 (421)
++++-
T Consensus 427 ~~~~~ 431 (433)
T PRK06855 427 IEEYL 431 (433)
T ss_pred HHHHh
Confidence 98653
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=2e-52 Score=399.10 Aligned_cols=371 Identities=25% Similarity=0.423 Sum_probs=313.8
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..++.++.+.++.+..... +.++|+|+.|.|. +++++.+.+++.+.+... ...|++..|.++||++++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia 101 (413)
T PLN00175 34 KRLEKFKTTIFTQMSSLAI-------KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIA 101 (413)
T ss_pred HHhhcCCCCHHHHHHHHhh-------cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHH
Confidence 3455566666666655432 4689999999987 466788999999988763 468999999999999999
Q ss_pred HHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+++++++|+.++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.+++++++ +.+|++++
T Consensus 102 ~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~-~~~~~~~l 180 (413)
T PLN00175 102 ERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPD-FAVPEDEL 180 (413)
T ss_pred HHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCccc-CCCCHHHH
Confidence 99999889888887 79999999999999999999999999999999999999999999999999986543 78999999
Q ss_pred HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631 176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK 254 (421)
Q Consensus 176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK 254 (421)
++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|..+.+++. ..++..+.. .+++|+++||||
T Consensus 181 ~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK 259 (413)
T PLN00175 181 KAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGK 259 (413)
T ss_pred HHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchh
Confidence 999888899999999999999999999999999999999999999999999988653 234444433 468999999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|+
T Consensus 260 ~~~~~G~RiG~~v~~--------~~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~ 330 (413)
T PLN00175 260 TFSLTGWKIGWAIAP--------PHLTWGVRQAHSFLTFATATPMQWAAVAALRA-PESYYEELKRDYSAKKDILVEGLK 330 (413)
T ss_pred hccCcchheeeeEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 357777766543 3457888999999999975 357889999999999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFAIEPSALEEGLG 408 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~~~ 408 (421)
+. |+. +..|.+++|+|++++... ..++.+++..+++++||.+.||..|+. .+++|++++.++++++++++
T Consensus 331 ~~-g~~-~~~p~g~~f~~~~~~~~~---~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~ 405 (413)
T PLN00175 331 EV-GFK-VYPSSGTYFVMVDHTPFG---FENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVE 405 (413)
T ss_pred HC-CCe-ecCCCeeEEEEEeccccC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHH
Confidence 87 777 557899999999874211 124678888888888999999998842 46899999989999999999
Q ss_pred HHHHHHH
Q 014631 409 RIKAFCQ 415 (421)
Q Consensus 409 ~l~~~~~ 415 (421)
+|.++++
T Consensus 406 rL~~~~~ 412 (413)
T PLN00175 406 RMKTKLK 412 (413)
T ss_pred HHHHHHh
Confidence 9998875
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.4e-52 Score=396.44 Aligned_cols=377 Identities=22% Similarity=0.321 Sum_probs=310.8
Q ss_pred hhHHHHHHHHHHhcccc-CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhC
Q 014631 25 LTVRSALTIIKQNLKEN-DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSEL 103 (421)
Q Consensus 25 ~~~~~~~~~~~~~~~~~-~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~ 103 (421)
.++|+-...+.+.+..- -..+.++|+.|.|.. +++++.+.+++.+.+.......|++..|.++||+++++++++.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~ 95 (405)
T PRK06207 19 QEVRQSAAGLEALLRGEPLPGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFT 95 (405)
T ss_pred HHHHhhhhhhhhhhcCCcCCCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHh
Confidence 44554444444333111 145779999999772 25667888888888776545689999999999999999999988
Q ss_pred CCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc---CCCCccCCHHHHHhhh
Q 014631 104 PCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL---PEKGWEVDLDGLEALA 179 (421)
Q Consensus 104 ~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~~~~d~e~l~~~~ 179 (421)
|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++ .++++++|++++++.+
T Consensus 96 g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~ 175 (405)
T PRK06207 96 GAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAF 175 (405)
T ss_pred CCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhh
Confidence 988888 899999999999999999999999999999999999999999999999999875 2346889999999998
Q ss_pred ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCC
Q 014631 180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIV 258 (421)
Q Consensus 180 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~ 258 (421)
.++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+.+....++..++ ..+++++++||||.|++
T Consensus 176 ~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l 255 (405)
T PRK06207 176 KAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESL 255 (405)
T ss_pred hhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccC
Confidence 88899999999999999999999999999999999999999999999988775544444332 24689999999999999
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+|+|+||++++ +++++.+...... ..+.+.+.|.++..+|+. ...++++..+.++++++.+.+.|+++++
T Consensus 256 pGlRiG~ii~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~ 326 (405)
T PRK06207 256 SGYRLGVAFGS--------PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSE-PDGWMKDRIARHQAIRDDLLRVLRGVEG 326 (405)
T ss_pred cccceEEEEcC--------HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999985 3577777665432 345667889999888864 2356777788888899999999988878
Q ss_pred ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+. +..|++|+|+|++++... .++.+++..+++++||.+.||..|+. .+++|||++.+.+++++++++|.++++
T Consensus 327 ~~-~~~p~gg~fl~~~l~~~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~ 401 (405)
T PRK06207 327 VF-VRAPQAGSYLFPRLPRLA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIE 401 (405)
T ss_pred ce-ecCCCeeEEEEEeCcccC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 77 557889999999997421 14567887776788999999998864 579999999889999999999999998
Q ss_pred Hhh
Q 014631 416 RHA 418 (421)
Q Consensus 416 ~~~ 418 (421)
+++
T Consensus 402 ~~~ 404 (405)
T PRK06207 402 RYR 404 (405)
T ss_pred Hhh
Confidence 765
No 14
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=2e-51 Score=391.15 Aligned_cols=375 Identities=23% Similarity=0.349 Sum_probs=308.1
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..+..+.+..+..+........ ..++++++|+.|.|. ++.++.+.+++.+.+.......|++..|.++||++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia 80 (389)
T PRK08068 7 ELLKQLPKQFFASLVAKVNKKV--AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAA 80 (389)
T ss_pred hHhhhcCccHHHHHHHHHHHHH--hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Confidence 3455555566666555443222 236789999999876 4566788999998887655568998999999999999
Q ss_pred HHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+|+++.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++++.++++.+|++++
T Consensus 81 ~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l 160 (389)
T PRK08068 81 DFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKI 160 (389)
T ss_pred HHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHH
Confidence 99998888888888 89999999999999999999999999999999999999999999999999987666788999999
Q ss_pred HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc-cCCCCCEEEEccccc
Q 014631 176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV-FGSTVPVITLGSMSK 254 (421)
Q Consensus 176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK 254 (421)
++.+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++.. .+..+++++++||||
T Consensus 161 ~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK 240 (389)
T PRK08068 161 PEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSK 240 (389)
T ss_pred HHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchh
Confidence 9988778899999999999999999999999999999999999999999998876543333222 233457899999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.|+++|+|+||++++ +++++.+...... ..+.++..|.++..++.. ...++++.++.++++++.+.+.|+
T Consensus 241 ~~g~~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~~~~~L~ 311 (389)
T PRK08068 241 TFNMAGWRVAFAVGN--------ESVIEAINLLQDHLFVSLFGAIQDAAIEALLS-DQSCVAELVARYESRRNAFISACR 311 (389)
T ss_pred ccCCccceeEeEecC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975 4577777666532 234555677877777753 347788899999999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
++ |+. +..|.+|+|+|+.++.. .++.++...+++++||.+.||..|+. .+++||+++.+++++.+++++|.
T Consensus 312 ~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~ 384 (389)
T PRK08068 312 EI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERIG 384 (389)
T ss_pred HC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHHH
Confidence 87 777 55788899999998742 14677888877778999999998875 57999999988889999998887
Q ss_pred HH
Q 014631 412 AF 413 (421)
Q Consensus 412 ~~ 413 (421)
++
T Consensus 385 ~~ 386 (389)
T PRK08068 385 KL 386 (389)
T ss_pred Hh
Confidence 63
No 15
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-51 Score=392.03 Aligned_cols=371 Identities=22% Similarity=0.354 Sum_probs=309.8
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..+.++.+.++.+...+. +..+.++++|+.|.|. +++++.+.+++.+.+.......|+ ..|.++||+++++|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~ 81 (399)
T PRK07681 9 MKAFQSSIFSELGAYKKEK--IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEY 81 (399)
T ss_pred HhhcCccHHHHHHHHHHHh--hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHH
Confidence 3334455555555443322 1237789999999876 466788999998887654333454 47999999999999
Q ss_pred HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
+++.+|..+++ ++|++|+|+++++..++.+++++||.|++++|+|+.+...++..|++++.++++.+++|.+|++++++
T Consensus 82 ~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~ 161 (399)
T PRK07681 82 YNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPE 161 (399)
T ss_pred HHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHH
Confidence 99988988998 89999999999999999999999999999999999999999999999999998766678899999998
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++|+++||||.|
T Consensus 162 ~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 241 (399)
T PRK07681 162 EIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSY 241 (399)
T ss_pred hccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccccc
Confidence 88778899999999999999999999999999999999999999999999887655445444443 35789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++++.+..... ...+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++
T Consensus 242 ~~~GlRiG~~i~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 312 (399)
T PRK07681 242 SLAGSRIGYMIGN--------EEIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFRTF 312 (399)
T ss_pred CCccceeEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 9999999999985 357777766653 23477888999999999753 4678888889999999999999987
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
|+. +..|.+|+|+|++++.. .++.+++.++++++||.+.||..|+. ++++|++++.+++++++++++|++
T Consensus 313 -g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 313 -GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred -CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 777 44788999999999742 24677888888778999999998865 469999999888999999999988
No 16
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=3.2e-51 Score=389.48 Aligned_cols=375 Identities=21% Similarity=0.354 Sum_probs=314.9
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++.+.+..+.++....++.. ..++++++|+.|.|. +++++.+.+++.+.+.... ..|++..|.+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia~ 80 (387)
T PRK08960 8 RSRDIEPFHVMALLARANELE--AAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIAG 80 (387)
T ss_pred HHHhCCchHHHHHHHHHHHHH--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHHH
Confidence 355566677777776655432 247889999999976 5678999999999887543 479889999999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++++.+|+++++++|++|+|++++++.++.+++++||+|++++|+|+.+...+...|.+++.++++.++++.+|++++++
T Consensus 81 ~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 160 (387)
T PRK08960 81 FYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVER 160 (387)
T ss_pred HHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHH
Confidence 99998898899999999999999999999999999999999999999999999999999999998766678899999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI 257 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 257 (421)
.++++++.+++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++. ..++... .+++++++||||.|+
T Consensus 161 ~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~g 237 (387)
T PRK08960 161 HWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYFG 237 (387)
T ss_pred HhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeecccccC
Confidence 9888889999999999999999999999999999999999999999999877543 2233332 457999999999999
Q ss_pred CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
++|+|+||++++ +++++.+..... ...+++.+.|.++..++......++.+.++.++++++.+.+.|+++
T Consensus 238 ~~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~- 308 (387)
T PRK08960 238 MTGWRLGWLVAP--------PAAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL- 308 (387)
T ss_pred CcccEEEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 999999999986 356777766543 3446788999998888865345788888999999999999999987
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++.++..|.+|+|+|++++... .++.+++.++++++||.+.||..|+. .+++|++++.+.+++.+++++|.++
T Consensus 309 ~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 384 (387)
T PRK08960 309 GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIARG 384 (387)
T ss_pred CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 6653346889999999987421 14677887887888999999998864 4699999998889999999999887
Q ss_pred HH
Q 014631 414 CQ 415 (421)
Q Consensus 414 ~~ 415 (421)
++
T Consensus 385 ~~ 386 (387)
T PRK08960 385 LR 386 (387)
T ss_pred Hh
Confidence 64
No 17
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=1.5e-51 Score=392.19 Aligned_cols=355 Identities=19% Similarity=0.305 Sum_probs=296.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.+.++|+|+.|.|. +++++.+.+++.+.+.......|++..|.++||+++++|+.+.+|++++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~ 103 (388)
T PRK07366 28 AGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQE 103 (388)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHH
Confidence 37889999999976 567888999999887655456799989999999999999999889889998 6999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++.+++.+++++||+|++++|+|+.+...++..|++++.++++.++++.+|++++++.+.++++++++++||||||.++|
T Consensus 104 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s 183 (388)
T PRK07366 104 GTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAP 183 (388)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCC
Confidence 99999999999999999999999999999999999999999876667888999998877777899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCC-cccccccCCC-CCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVFGST-VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++||++||+||+|.++.+++.. ..++..++.. +++++++||||.|+++|+|+||++++ +
T Consensus 184 ~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~ 255 (388)
T PRK07366 184 LSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGN--------A 255 (388)
T ss_pred HHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCC--------H
Confidence 999999999999999999999999999886643 3344444433 46899999999999999999999985 4
Q ss_pred HHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631 279 RIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 279 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
++++.+....... .+.++..+.++.+.+.. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++..
T Consensus 256 ~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~~ 332 (388)
T PRK07366 256 QLIQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPEP 332 (388)
T ss_pred HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCcc
Confidence 5777777665432 23323334444444532 36788999999999999999999987 776 44789999999999742
Q ss_pred cccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 358 LLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
.. .++.+++..+++++||.+.||..|+. .+++|++++.+++++++++++|.+++
T Consensus 333 ~~---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 333 WQ---GNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred cC---CCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 10 13567777787888999999998865 47999999988999999999998753
No 18
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.2e-51 Score=387.39 Aligned_cols=370 Identities=25% Similarity=0.460 Sum_probs=307.4
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++.+....++.+....+. .+++++|+.|.|. +++++.+.+++.+.... ....|++..|.+++|+++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~------~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~ 77 (384)
T PRK06348 9 KYQQMEVNIMAEIATLAKK------FPDIIDLSLGDPD----LITDESIINAAFEDAKK-GHTRYTDSGGDVELIEEIIK 77 (384)
T ss_pred HHhcCCccHHHHHHHHHHh------cCCcEEcCCCCCC----CCCCHHHHHHHHHHHhc-CCCCCCCCCCcHHHHHHHHH
Confidence 3445555666666665432 3578999999876 45567776666555443 34689999999999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++..+++++.+|++++++
T Consensus 78 ~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 157 (384)
T PRK06348 78 YYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEA 157 (384)
T ss_pred HHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHH
Confidence 99988898999999999999999999999999999999999999999999999999999998887656678899999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.+.++++++++++||||||.++|.+++++|+++|+++|++||+||+|.++.+++. ..++..++. .+++++++||||.|
T Consensus 158 ~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~~ 236 (384)
T PRK06348 158 LITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKDF 236 (384)
T ss_pred hhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhcc
Confidence 8888889999999999999999999999999999999999999999999987653 334444432 46899999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++++.+..... ...+++.+.|.++..++.. .+.+.++.++.++++++.+.+.|+++
T Consensus 237 ~l~GlRiG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~~ 307 (384)
T PRK06348 237 AMTGWRIGYVIAP--------DYIIETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIESI 307 (384)
T ss_pred CCccccceeeecC--------HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999986 356677766553 2346788999999888864 45678888999999999999999988
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+++. +..|++|+|+|++++... .++.+++..+++++||.+.||+.|+. ++++|+|++.+++++++++++|++.
T Consensus 308 ~~~~-~~~p~gg~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 308 PNLS-LHPPKGSIYAFINIKKTG----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCce-eccCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHhh
Confidence 7776 557889999999987421 14677888877788999999999875 4799999998899999999998764
No 19
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=3.5e-51 Score=398.14 Aligned_cols=398 Identities=22% Similarity=0.373 Sum_probs=308.8
Q ss_pred hHHhhhhhhhHHHHHHHHHHh---cccc----CCCCeeeccCCCCC----------------CCC-C--------CCCcH
Q 014631 17 EHITATATLTVRSALTIIKQN---LKEN----DPRPIIPLGHGDPS----------------AFP-C--------FRTTP 64 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~i~l~~g~~~----------------~~~-~--------~~~~~ 64 (421)
..+..++.+...++..+.++. +.+. ++.++|+|++|+|. ... . ...|.
T Consensus 12 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~P~ 91 (481)
T PTZ00377 12 PRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLFPA 91 (481)
T ss_pred HHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccCCH
Confidence 345555555444444333332 2121 46899999999985 211 0 01255
Q ss_pred HHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCC
Q 014631 65 VAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKP 141 (421)
Q Consensus 65 ~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p 141 (421)
.+.+++.+.++.. ....|++..|+++||+++++|+++.+|+.+++++|++|+|+++++..++.+++ ++||.|+++.|
T Consensus 92 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P 171 (481)
T PTZ00377 92 DVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIP 171 (481)
T ss_pred HHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCC
Confidence 7778877766542 34579999999999999999999988999999999999999999999999998 79999999999
Q ss_pred CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
+|+.|...++..|.+++.++++.+++|++|++++++.+.+ +++++++++||||||.++|.+++++|+++|++||
T Consensus 172 ~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~ 251 (481)
T PTZ00377 172 QYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKG 251 (481)
T ss_pred CchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCC
Confidence 9999999999999999999988777899999999998764 6888999999999999999999999999999999
Q ss_pred cEEEEcccccccccCC-CCccccc----ccCCC----CCEEEEcccccc-cCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631 216 IMVISDEVYDHLTFGS-TPYVRMG----VFGST----VPVITLGSMSKR-WIVPGWRLGWLVTSDPSGILQELRIVDSIK 285 (421)
Q Consensus 216 ~~li~De~~~~~~~~~-~~~~~~~----~~~~~----~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 285 (421)
++||+||+|..+.|++ ..+.++. .++.. .++++++||||. ++++|+|+||+++.+.. +++++.+.
T Consensus 252 ~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p-----~~li~~l~ 326 (481)
T PTZ00377 252 IVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP-----PEVREQIY 326 (481)
T ss_pred CEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC-----HHHHHHHH
Confidence 9999999999998853 2333322 22221 268999999997 58899999999873100 35777776
Q ss_pred hhcccccCCchHHHHHHHHHhhcc---c---hhH---HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 286 GYLNISSGPATFVQGAVPQIFKNT---K---EDF---FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~---~---~~~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
.......+++.++|.++..+++.. . +.+ +.+..+.++++++.+.+.|++++|+. +..|++|+|+|++++.
T Consensus 327 ~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~~~l 405 (481)
T PTZ00377 327 KLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPRIEL 405 (481)
T ss_pred HHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEeeccC
Confidence 665444468889999999998631 1 123 33334457899999999999988888 5589999999987642
Q ss_pred cc--c-----cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 357 SL--L-----EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 357 ~~--~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+. . .+..++..++..+++++||.+.||+.|+. .+++|+|++.+++++++++++|.++++++.++
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 406 PEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred chhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence 10 0 00112455677888999999999999974 35899999988899999999999999887653
No 20
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.5e-51 Score=387.83 Aligned_cols=381 Identities=21% Similarity=0.330 Sum_probs=307.9
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..++...+.++....+ ++.+ .+.++++|+.|.|. .+.++.+.+++.+.+.......|++..|.++||+++++|
T Consensus 10 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~ 83 (403)
T PRK08636 10 IKRLPKYVFAEVNELKM-AARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNW 83 (403)
T ss_pred HHhCCccHHHHHHHHHH-HHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHH
Confidence 44445555555555443 2322 36789999999877 344666777777766554457899999999999999999
Q ss_pred HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH--
Q 014631 99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL-- 175 (421)
Q Consensus 99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l-- 175 (421)
+++.+|+.++++ +|++|+|+++++..++++++++||.|++++|+|+.+...++..|++++.++++.++++++|++.+
T Consensus 84 l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 163 (403)
T PRK08636 84 YKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFE 163 (403)
T ss_pred HHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhh
Confidence 999889888887 79999999999999999999999999999999999999999999999999986556678998754
Q ss_pred --Hhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEE
Q 014631 176 --EALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITL 249 (421)
Q Consensus 176 --~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~ 249 (421)
++.++ ++++.+++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+.++++
T Consensus 164 ~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~ 243 (403)
T PRK08636 164 NLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVES 243 (403)
T ss_pred HHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEE
Confidence 45443 46788999999999999999999999999999999999999999999887654455555543 2467889
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
+||||.|+++|+|+||++++ +++++.+...... ..+++.+.|.++..+++. ...++++.++.++++++.+
T Consensus 244 ~S~SK~~~~~GlRiG~iv~~--------~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l 314 (403)
T PRK08636 244 YTLSKSYNMAGWRVGFVVGN--------KKLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVL 314 (403)
T ss_pred EecccccCCccceeeeeeCC--------HHHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999985 3567776665432 235566778777766653 3678888899999999999
Q ss_pred HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHH
Q 014631 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEG 406 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~ 406 (421)
.+.|++. ++. +..|.+|+|+|++++.... ..++.+++..+++++||.+.||..|+. .+++||+++.++++++++
T Consensus 315 ~~~L~~~-~~~-~~~p~~g~~~~~~l~~~~~--~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~ 390 (403)
T PRK08636 315 IESFANA-GWE-LQKPRASMFVWAKIPEPAR--HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQA 390 (403)
T ss_pred HHHHHHC-CCc-ccCCCcceEEEEECCCccC--CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHH
Confidence 9999987 776 5578999999999974310 013567887878889999999998865 479999999889999999
Q ss_pred HHHHHHHHHHhh
Q 014631 407 LGRIKAFCQRHA 418 (421)
Q Consensus 407 ~~~l~~~~~~~~ 418 (421)
+++|+++++.+.
T Consensus 391 ~~rl~~~l~~~~ 402 (403)
T PRK08636 391 ARNIKKFLKELE 402 (403)
T ss_pred HHHHHHHHHhhc
Confidence 999999997753
No 21
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.4e-50 Score=385.31 Aligned_cols=351 Identities=25% Similarity=0.436 Sum_probs=299.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.++++++|+.|.|. +++++.+.+++.+.+.......|++..|.+++|+++++|+++.+|..++++ +|++|+|+++
T Consensus 29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 37789999999876 466788999999888754456899989999999999999998888878887 5899999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus 105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (385)
T PRK09276 105 GIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVAD 184 (385)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999876667888999999888888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
.+++++|+++|++||++||+||+|.++.+++....++..++. .+++++++||||.|+++|+|+||++++ ++
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~--------~~ 256 (385)
T PRK09276 185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGN--------AD 256 (385)
T ss_pred HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCC--------HH
Confidence 999999999999999999999999998876655555555543 356899999999999999999999985 35
Q ss_pred HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
+++.+..... ...+.+.+.|.++..++.. .+.++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|++++..
T Consensus 257 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~- 332 (385)
T PRK09276 257 LIAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG- 332 (385)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC-
Confidence 6777766543 2345667788888888864 36788888999999999999999987 777 55788899999998743
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.++.+++.++++++||.+.||..|+. ++++||+++.+++++.+++++|.+
T Consensus 333 ----~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 ----YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ----CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 24677888887788999999998865 469999999888899999988864
No 22
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=1.5e-50 Score=384.77 Aligned_cols=351 Identities=27% Similarity=0.458 Sum_probs=300.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.++++++|+.|.|. +++++.+.+++.+.+.......|++..|++++|+++++|+++.+|.+++++ +|++|+|+++
T Consensus 27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 37899999999976 466788999999887765557899999999999999999998888877776 6899999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++..++..++++||+|++++|+|..+...++..|++++.++.+.++++.+|++++++.+.++++++++++||||||.+++
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~ 182 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP 182 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence 99999999999999999999999999999999999999999876667888999999888888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
.+++++|+++|++||++||+||+|.++.+.+....++..++. .+++++++||||.|+++|+|+||++++ ++
T Consensus 183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~--------~~ 254 (383)
T TIGR03540 183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGN--------AD 254 (383)
T ss_pred HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCC--------HH
Confidence 999999999999999999999999998886655555555543 357899999999999999999999985 35
Q ss_pred HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
+++.+..... ...+++.+.|.++..+++. ...++++.++.++++++.+.+.|++. ++. +..|.+|+|+|++++..
T Consensus 255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~- 330 (383)
T TIGR03540 255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNG-PQDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG- 330 (383)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence 7777766543 2346677889998888875 36788888999999999999999987 787 55788899999998742
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.++.+++.++++++||.+.||..|+. .+++|++++.+++++.+++++|.+
T Consensus 331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 24677888887888999999998865 468999999888999999988764
No 23
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-50 Score=385.77 Aligned_cols=361 Identities=23% Similarity=0.398 Sum_probs=308.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
++.++++|+.|.|. ++.++.+.+++.+.+... ...|++..|.+++|+++++++++.+|..+++++|++|+|+++|
T Consensus 31 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~a 105 (402)
T PRK06107 31 AGRSIVDLTVGEPD----FDTPDHIKQAAVAAIERG-ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQA 105 (402)
T ss_pred ccCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 37789999999977 456788999999988753 3579999999999999999999888988899999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
++.++.+++++||+|++++|+|..|...+...+.+++.++.+.++++.+|++++++.+.++++++++++|+||||.++|.
T Consensus 106 l~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 185 (402)
T PRK06107 106 IFLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSR 185 (402)
T ss_pred HHHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCH
Confidence 99999999999999999999999998888888888888887655678899999999888888999999999999999999
Q ss_pred HHHHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 202 QQLQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 202 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
+++++|+++|+++ |+++|+||+|+.+.+.+....++..... .+++++++||||.|+++|+|+||++++ +
T Consensus 186 ~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~--------~ 257 (402)
T PRK06107 186 AELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP--------A 257 (402)
T ss_pred HHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC--------H
Confidence 9999999999998 9999999999998887655444444432 358999999999999999999999985 3
Q ss_pred HHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631 279 RIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 279 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
++++.+..... ...+++.+.|.++..+|.. .+.++++.++.++++++.+.+.|++++|+. +..|++|+|+|++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~ 335 (402)
T PRK06107 258 DLIAAINKLQSQSSSCPSSISQAAAAAALNG-DQSFVTESVAVYKQRRDYALALLNAIPGLS-CLVPDGAFYLYVNCAGL 335 (402)
T ss_pred HHHHHHHHHHHhcccCCChHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEeeecccc
Confidence 57777777654 2457889999999999964 357888889999999999999999887887 55889999999988421
Q ss_pred ---ccc-C--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 358 ---LLE-G--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 358 ---~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
..+ + ..++.+++..+++++||.+.||..|+..+++|++++.++|++++++++|.+.+.++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 336 IGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred cccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 000 0 11456788888889999999999998889999999999999999999999998765
No 24
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=1e-50 Score=387.21 Aligned_cols=369 Identities=22% Similarity=0.376 Sum_probs=305.1
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
.+++...++.+...++. .+...|.++++|+.|.|. +++++.+.+++.+.+.. ...|++..|.++||+++++|+
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~ 78 (396)
T PRK09147 6 DRLQPYPFEKLRALFAG-VTPPADLPPISLSIGEPK----HPTPAFIKDALAANLDG--LASYPTTAGLPALREAIAAWL 78 (396)
T ss_pred hcCCcchHHHHHHHHHh-hhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhhh--hcCCCCCCCCHHHHHHHHHHH
Confidence 34445556666655543 223458899999999976 46678899999887653 468999999999999999999
Q ss_pred hhhCCCC-CCCC-cEEEcCCHHHHHHHHHHHhcCC---CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631 100 NSELPCK-LSPD-DVYLTAGCKQAIQVILTVLARP---GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG 174 (421)
Q Consensus 100 ~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~ 174 (421)
++.+|.. ++++ +|++|+|+++++..++++++++ ||.|++++|+|..+...++..|++++.+|++.+++|++|+++
T Consensus 79 ~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~ 158 (396)
T PRK09147 79 ERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDA 158 (396)
T ss_pred HHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHH
Confidence 9888887 8885 8999999999999999999999 899999999999999999999999999998777778999999
Q ss_pred HHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccc-cc---ccC--CCCCEE
Q 014631 175 LEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVR-MG---VFG--STVPVI 247 (421)
Q Consensus 175 l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~---~~~--~~~~~i 247 (421)
+++.+.++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++. ...+ +. ..+ ..++++
T Consensus 159 l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 238 (396)
T PRK09147 159 VPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLV 238 (396)
T ss_pred HHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEE
Confidence 9887777899999999999999999999999999999999999999999999887653 1111 11 121 236899
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
+++||||.|+++|+|+||++++ +++++.+..... ...+++.+.|.++.+.+.. ..++.+.++.++++++
T Consensus 239 ~~~S~SK~~~~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~ 308 (396)
T PRK09147 239 VFHSLSKRSNVPGLRSGFVAGD--------AALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFD 308 (396)
T ss_pred EEeccccccCCccceeeeecCC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHH
Confidence 9999999999999999999986 356777765543 2346777888887777743 5678888999999999
Q ss_pred HHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEecC
Q 014631 327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITFAI 398 (421)
Q Consensus 327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~~~ 398 (421)
.+.+.|++. +. +..|++|+|+|++++. ++.+++..+++++||.+.||..|+. .+++||+++.
T Consensus 309 ~~~~~L~~~--~~-~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~ 378 (396)
T PRK09147 309 AVTPILAPV--LD-VQLPDAGFYLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA 378 (396)
T ss_pred HHHHHHHHh--cC-CCCCCeeEEEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC
Confidence 999999874 44 3478999999999872 4677888888888999999998752 4689999998
Q ss_pred CHHHHHHHHHHHHHHHH
Q 014631 399 EPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~~ 415 (421)
+++++++++++|.+++.
T Consensus 379 ~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 379 PLAECVEAAERIVDFCR 395 (396)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 89999999999998763
No 25
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=3.6e-50 Score=384.25 Aligned_cols=391 Identities=25% Similarity=0.440 Sum_probs=307.9
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+.+++...+.++....++. +..++++++|+.|+|+.. .+++++.+.+++.+.+.. ...|++..|.++||++++++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~ 84 (404)
T PRK09265 10 LENVCYDIRGPVLKEAKRL--EEEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIMQY 84 (404)
T ss_pred HHhcCcchhHHHHHHHHHH--HHcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHHHH
Confidence 4444444444444444432 345789999999998742 256788888888877653 35899999999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++...+.++++++|++|+|+++++..++++++++||+|++++|+|..+...++..|.+++.++.+.++++.+|++++++.
T Consensus 85 ~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~ 164 (404)
T PRK09265 85 YQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSK 164 (404)
T ss_pred HhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHh
Confidence 98654447889999999999999999999999999999999999999999999999999888876556678999999998
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||.|++
T Consensus 165 ~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 244 (404)
T PRK09265 165 ITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRV 244 (404)
T ss_pred ccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccC
Confidence 88889999999999999999999999999999999999999999999998876555555555544568999999999999
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+|+|+||++++.+.... +.+++.+........+++.+.|.++..+|..... ..+.+..+++.++++.+.+.|+++++
T Consensus 245 pGlRiG~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~ 322 (404)
T PRK09265 245 AGFRVGWMVLSGPKKHA--KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPG 322 (404)
T ss_pred cccceEEEEEeCchHHH--HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999999975432111 2244444433233346788899999888864211 11222234677888999999988888
Q ss_pred ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+. +..|.+|+|+|++++.... +..++.+++.+++.++||.+.||..|+. .+++|++++.+++++++++++|.++++
T Consensus 323 ~~-~~~p~~g~~l~~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~ 400 (404)
T PRK09265 323 VS-CVKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRFLS 400 (404)
T ss_pred Cc-ccCCCcceEEEEEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHH
Confidence 87 5589999999999874311 0113556677788899999999999853 579999999889999999999999987
Q ss_pred Hhh
Q 014631 416 RHA 418 (421)
Q Consensus 416 ~~~ 418 (421)
.+.
T Consensus 401 ~~~ 403 (404)
T PRK09265 401 GYR 403 (404)
T ss_pred Hhc
Confidence 654
No 26
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=8.9e-51 Score=385.67 Aligned_cols=353 Identities=25% Similarity=0.452 Sum_probs=300.0
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al 122 (421)
..+|+|+.|.|. +++++.+.+++.+.+... ...|++..|++++|+++++++++.+|..++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 478999999977 355677888888877643 45798889999999999999999888888876 799999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.+++++++++||+|++++|+|+.+...++..|.+++.++.+.++++++|++++++.+.++++++++++|+||||.++|.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999999876556788999999999888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|+++|++||+++|+||+|.++.+++. ..++..+.. .+++++++||||.|+++|+|+||++++ ++++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAP--------VYFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcC--------HHHH
Confidence 999999999999999999999999988653 223333332 467999999999999999999999985 3577
Q ss_pred HHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
+.+..... ...+++.+.|.++..+|+.. +.++++.++.++++++.+.+.|+++ ++. +..|++++|+|+.++...
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~-- 320 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG-- 320 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence 77765543 23467789999999999753 4567888899999999999999987 877 557889999999885321
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++.+++..+++++||.+.||..|+. ++++|+|++.+++++++++++|+++++++
T Consensus 321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 24677888877788999999998865 58999999988999999999999998764
No 27
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=4.3e-50 Score=383.02 Aligned_cols=360 Identities=23% Similarity=0.376 Sum_probs=299.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a 121 (421)
+.++++|+.|.|. +++++.+.+++.+.+.......|++..|.++||+++++|+++++|..++++ +|++|+|++++
T Consensus 29 ~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~a 104 (405)
T PRK09148 29 GADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEG 104 (405)
T ss_pred CCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHH
Confidence 6789999999876 456788888888877654456899999999999999999998888888887 89999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++.+++++||+|++++|+|+.+...+...|++++.++.+.++.+..++++..+...++++.+++++||||||.++|.
T Consensus 105 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~ 184 (405)
T PRK09148 105 FANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADL 184 (405)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999999999999999999998665554445555444444678899999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|++||++||+||+|.++.+++..+.++..++. .+++++++||||.|+++|+|+||++++ +++
T Consensus 185 ~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~--------~~~ 256 (405)
T PRK09148 185 DFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGN--------ERL 256 (405)
T ss_pred HHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCC--------HHH
Confidence 99999999999999999999999998876654444444432 346788999999999999999999985 357
Q ss_pred HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
++.+...... ..+++.+.|.++..+|+. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++....
T Consensus 257 i~~l~~~~~~~~~~~~~~~q~~~~~~L~~-~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~~ 333 (405)
T PRK09148 257 IAALTRVKSYLDYGAFTPIQVAATAALNG-PQDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAWAPIPEAFR 333 (405)
T ss_pred HHHHHHHHHHhccCCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEEEECCCccC
Confidence 7777766542 346778899999998864 35788888999999999999999987 776 4478999999999874210
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
..+..++...+++++||.+.||..|+. .+++||+++.+.+++.+++++|.+++.++..
T Consensus 334 --~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~~ 393 (405)
T PRK09148 334 --HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSADE 393 (405)
T ss_pred --CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 013567777777788999999998865 4799999998899999999999999987643
No 28
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=6.4e-50 Score=380.90 Aligned_cols=377 Identities=23% Similarity=0.429 Sum_probs=308.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+.....+.++.+.....+ .. ..++.+++|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|+++++|
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 79 (388)
T PRK07337 7 VDAIEPFYVMELAKEAQA-LE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAAW 79 (388)
T ss_pred hHhcCchHHHHHHHHHHH-HH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 444445555555544432 21 247789999999976 456788899998887653 45799889999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+++.+|+.+++++|++|+|+++++..++.+++++||+|++++|+|.++...+...|++++.++.+.++++++|++++++.
T Consensus 80 ~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 159 (388)
T PRK07337 80 YARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAA 159 (388)
T ss_pred HHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhh
Confidence 99988988999999999999999999999999999999999999999999999999999999987666788999999999
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+.. .+.... .+++++++||||.|++
T Consensus 160 ~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~~ 236 (388)
T PRK07337 160 WGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFNM 236 (388)
T ss_pred cCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcCC
Confidence 9888999999999999999999999999999999999999999999998776542 222222 3568999999999999
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+|+|+||++++ +++.+.+..... ...+.+.+.|.++..++......++.+.++.++++++.+.+.|+++ +
T Consensus 237 ~G~RiG~~~~~--------~~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~ 307 (388)
T PRK07337 237 TGWRLGWLVVP--------EALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-G 307 (388)
T ss_pred chhheeeeecC--------HHHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 99999999986 356677766543 3346788899998888864333556778889999999999999986 6
Q ss_pred ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+.+...|++|+|+|++++....++..++.+++.++++++||.+.||..|+. .+++|++++.+++++++++++|.+++
T Consensus 308 ~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~l 387 (388)
T PRK07337 308 FKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKLF 387 (388)
T ss_pred CccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHHh
Confidence 653236889999999997421111124677888888889999999999865 47999999988999999999998865
No 29
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-50 Score=381.69 Aligned_cols=352 Identities=22% Similarity=0.388 Sum_probs=297.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~ 120 (421)
.|.++++|+.|+|. ++.|+.+.+++.+.+.......|++..|.++||+++++|+++.+|..+++++ |++|+|+++
T Consensus 33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 36789999999876 3456777787777765544568999999999999999999988888888884 899999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++..++.+++++||+|++++|+|..+...+...|++++.++++.+++|.+|++++++.+.++++++++++||||||.++|
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s 188 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP 188 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence 99999999999999999999999999888899999999999876677889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
.+++++|+++|+++|+++|+||+|.++.+++....++..++. .+.+++++||||.|+++|+|+||++++ ++
T Consensus 189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~--------~~ 260 (394)
T PRK05942 189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN--------RH 260 (394)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC--------HH
Confidence 999999999999999999999999998876654445444432 345788999999999999999999985 45
Q ss_pred HHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 280 IVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 280 ~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
+++.+..... ...+.+.+.|.++..+++. .+.+.++.+++++++++.+.+.|++. ++. +..|++++|+|++++..
T Consensus 261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~- 336 (394)
T PRK05942 261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG- 336 (394)
T ss_pred HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence 7777776553 2346777889998888864 45678888999999999999999887 777 55788899999998742
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
.++.+++.++++++||.+.||..|+. .+++|++++.+.+.+.+++++|.++
T Consensus 337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 389 (394)
T PRK05942 337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQA 389 (394)
T ss_pred ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHh
Confidence 14667777788889999999998864 5799999997788888888888764
No 30
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-49 Score=379.36 Aligned_cols=370 Identities=27% Similarity=0.461 Sum_probs=309.1
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
..+....++++...... ...+++|+.|.|. +++++.+.+++.+.+.... ..|++..|.+++|+++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~------~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~ 74 (382)
T PRK06108 6 RALPESGIREVANAGRG------REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYV 74 (382)
T ss_pred hhCCchHHHHHHHHHhc------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHH
Confidence 33444556665544331 3578999999976 5778899999999887643 46999999999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHHhh
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLEAL 178 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~ 178 (421)
++.+|..+++++|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.++.+.+ ++|.+|++++++.
T Consensus 75 ~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~ 154 (382)
T PRK06108 75 SRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAA 154 (382)
T ss_pred HHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHh
Confidence 988888889999999999999999999999999999999999999999999999999999998653 4577999999998
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCccccccc-CCCCCEEEEccccccc
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVF-GSTVPVITLGSMSKRW 256 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~ 256 (421)
++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.++ +.....+..+ +..+++++++||||.|
T Consensus 155 ~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 234 (382)
T PRK06108 155 ITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNW 234 (382)
T ss_pred cCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhc
Confidence 8888899999999999999999999999999999999999999999999876 3222222232 2346799999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++++.+..... ...+++.+.|.++..+|.. ...++++.+++++++++.+.+.|+++
T Consensus 235 g~~G~RiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (382)
T PRK06108 235 AMTGWRLGWLVAP--------PALGQVLEKLIEYNTSCVAQFVQRAAVAALDE-GEDFVAELVARLRRSRDHLVDALRAL 305 (382)
T ss_pred cCcccceeeeeCC--------HHHHHHHHHHHHhcccCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999985 356676665543 2356788899999888875 35677888999999999999999988
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+++. +..|++|+|+|++++.. .++.+++..+++++||.+.||..|+. .+++|+|++.+++++++++++|+++
T Consensus 306 ~~~~-~~~p~~g~~~~~~l~~~-----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 379 (382)
T PRK06108 306 PGVE-VAKPDGAMYAFFRIPGV-----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRF 379 (382)
T ss_pred CCCc-ccCCCeeEEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence 8888 55788999999998742 14667888888889999999998864 5799999999999999999999988
Q ss_pred HH
Q 014631 414 CQ 415 (421)
Q Consensus 414 ~~ 415 (421)
++
T Consensus 380 l~ 381 (382)
T PRK06108 380 LA 381 (382)
T ss_pred Hh
Confidence 74
No 31
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6.3e-50 Score=381.12 Aligned_cols=373 Identities=25% Similarity=0.434 Sum_probs=310.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+.+.....++.+...... ...+++|+.|.|. +++++.+.+++.+.+... ...|.+..|.++||++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 82 (391)
T PRK08361 14 INLIQRSKIRELFERASK------MENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGIPELREAIAEY 82 (391)
T ss_pred HHhCCccHHHHHHHHHHh------hcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence 434444555555543321 3578999999977 455788999998887653 45788889999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+++.+|.++++++|++|+|+++++..++.+++++||+|++++|+|.++...+...|++++.+++++++++.+|++++++.
T Consensus 83 ~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 162 (391)
T PRK08361 83 YKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLEL 162 (391)
T ss_pred HHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHh
Confidence 99888888999999999999999999999999999999999999999999999999999999987766788999999999
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
+.++++++++++|+||||.++|.+++++|+++|+++++++|+||+|.++.+.+....++...+ .+++++++||||.|++
T Consensus 163 i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~~~s~SK~~~~ 241 (391)
T PRK08361 163 ITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTILANSFSKTFAM 241 (391)
T ss_pred cccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEEEecCchhcCC
Confidence 988899999999999999999999999999999999999999999999887654433443333 2578999999999999
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
+|+|+||++++ +++++.+..... ...+.+.+.|.++..+++... ..++++.++.++++++.+.+.|++++
T Consensus 242 ~GlRiG~~~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 313 (391)
T PRK08361 242 TGWRLGFVIAP--------EQVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMP 313 (391)
T ss_pred cHhhhhhhccC--------HHHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999985 346666655443 234677888999988887533 35688889999999999999999988
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
++. +..|.+|+|+|++++... .++.+++..+++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 314 ~~~-~~~p~g~~~~~~~l~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~~l 388 (391)
T PRK08361 314 HIK-VFEPKGAFYVFANIDETG----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLIEAMERMEKAL 388 (391)
T ss_pred CCe-ecCCCEEEEEEEECCCCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHH
Confidence 887 557889999999997421 14677887777778999999998865 47999999988899999999999988
Q ss_pred HH
Q 014631 415 QR 416 (421)
Q Consensus 415 ~~ 416 (421)
++
T Consensus 389 ~~ 390 (391)
T PRK08361 389 EE 390 (391)
T ss_pred hc
Confidence 65
No 32
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.8e-51 Score=363.17 Aligned_cols=349 Identities=29% Similarity=0.482 Sum_probs=297.3
Q ss_pred ccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHH
Q 014631 49 LGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQVILT 127 (421)
Q Consensus 49 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~ 127 (421)
|+.|.|+ +++|+.+.+++++.+.....++|....|+++|++++++.+.+++|...++ ++|++|.|+.+++...+.
T Consensus 36 LgqGfp~----~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPD----FPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCC----CCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 9999977 79999999999999998777899999999999999999999988876666 469999999999999999
Q ss_pred HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc------CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 128 VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL------PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 128 ~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~------~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+++++||+|++.+|.|..|....+..|..++.++.. ..+.|.+|.++++..+.++||+|++++||||||.++|.
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999987 34678899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
++|++|+++|++||+++|+||+|..+.+++.....+..+ +..++++.++|+||+|++.|||+||++++ +.+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp--------~~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGP--------KHL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeech--------HHh
Confidence 999999999999999999999999999999755555554 45778999999999999999999999994 245
Q ss_pred HHHHhhhc-ccccCCchHHHHHHHHHhhccc-------hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631 281 VDSIKGYL-NISSGPATFVQGAVPQIFKNTK-------EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352 (421)
Q Consensus 281 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 352 (421)
........ +.....+++.|.|...++.... ..+..+..+.++++++.+.+.|.++ |+. +..|++++|+|+
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a 341 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA 341 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence 55555543 3344666677777766665322 1344558999999999999999999 999 669999999999
Q ss_pred ecCccc-------ccCCCChHHHHHHHHhhcCeeEEeCCCCCCC-------CeEEEEecCCHHHHHHHHHHHH
Q 014631 353 KLNLSL-------LEGISDDMEFALQLAKEESVIVLPGMAVGMK-------NWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 353 ~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~-------~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
+++... .....++..+..+++++.|+.+.|++.|+.+ +.+|+++..+++.++.+.++|+
T Consensus 342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 998211 1112356778999999999999999999874 3567777777888888888877
No 33
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=3.2e-49 Score=375.60 Aligned_cols=357 Identities=24% Similarity=0.380 Sum_probs=302.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~a 121 (421)
.+++++|+.|.|. +++++.+.+++.+.+.......|++..|.+++|+++++++.+++|..++ +++|++|+|++++
T Consensus 26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~ 101 (389)
T PRK05957 26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA 101 (389)
T ss_pred CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence 3578999999977 5678899999998876554467999999999999999999998887777 7789999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++..++++||+|++++|+|..+...++..|++++.++.+ +++++|+|++++.++++++++++++|+||||.++|.
T Consensus 102 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~ 179 (389)
T PRK05957 102 FMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPE 179 (389)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCH
Confidence 999999999999999999999999988888999999998864 457799999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||++++ +++
T Consensus 180 ~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~--------~~~ 251 (389)
T PRK05957 180 ALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIP--------IHL 251 (389)
T ss_pred HHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecC--------HHH
Confidence 999999999999999999999999998765432232232 44568999999999999999999999985 357
Q ss_pred HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc-cccCCCCceeEEEEecCccc
Q 014631 281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI-TCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~-~~~~~~~~~~~~~~~~~~~~ 358 (421)
++++...... ..+++.+.|.++..+|+. ...++++..+.++++++.+.+.|++++++ . +..|.+|+|+|++++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~~~~~gg~~~~~~~~~~- 328 (389)
T PRK05957 252 LEAIKKIQDTILICPPVVSQYAALGALQV-GKSYCQQHLPEIAQVRQILLKSLGQLQDRCT-LHPANGAFYCFLKVNTD- 328 (389)
T ss_pred HHHHHHHHhhcccCCCcHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhcCCCcc-ccCCCeeEEEEEeCCCC-
Confidence 7777766542 346677899998888864 34677888888999999999999988774 4 55788899999998642
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.++.+++.++++++||.+.||+.|+. .+++|+|++ .+++++++++++|.+.++++.+|
T Consensus 329 ----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~~ 389 (389)
T PRK05957 329 ----LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQQ 389 (389)
T ss_pred ----CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhcC
Confidence 25778888888788999999998865 468999998 68999999999999999887553
No 34
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.9e-49 Score=377.49 Aligned_cols=367 Identities=29% Similarity=0.528 Sum_probs=301.7
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..+.++++|+.|.|.. ..+++++.+.+++.+.+... ...|++..|.++||+++++|++..+|+++++++|++|+|+++
T Consensus 27 ~~~~~~i~l~~g~p~~-~~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 104 (398)
T PRK08363 27 KKGIKVIRLNIGDPVK-FDFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE 104 (398)
T ss_pred hcCCCeEEEeCCCCCc-CCCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence 3478999999999852 23577899999999888654 347988899999999999999998898999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++.+++.+++++||.|++++|+|.++...+...|.+++.++...++++.+|++++++.+.++++++++++||||||.+++
T Consensus 105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999998888774333456778999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++|+++|+++|+||+|.++.+.+. ..++..++...++++++||||.|+++|+|+||+++.++.... ..+
T Consensus 185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~--~~l 261 (398)
T PRK08363 185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKL--AEV 261 (398)
T ss_pred HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHH--HHH
Confidence 99999999999999999999999999887653 233444555567999999999999999999999983221111 122
Q ss_pred HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
...+........+++.++|.++..+|.. ...++++.+++++++++.+.+.|.+++++. +..|.+++|+|+.++...
T Consensus 262 ~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~-- 337 (398)
T PRK08363 262 REAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEEGP-- 337 (398)
T ss_pred HHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEeccCC--
Confidence 2222222222246788899999888864 467888889999999999999999887877 557899999998887421
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
..++.+++.++++++||.+.||..|+. ++++|+|++.+++++++++++|++++++.
T Consensus 338 -~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 395 (398)
T PRK08363 338 -WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRER 395 (398)
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 013567777778899999999998865 47999999988999999999999988764
No 35
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-49 Score=376.59 Aligned_cols=356 Identities=23% Similarity=0.361 Sum_probs=296.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCC-cEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK-LSPD-DVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~-~i~~~~g~~ 119 (421)
.+..+++|+.|.|. +++++.+.+++.+.+.......|++ .|.++||+++++|+++.+|+. ++++ +|++|+|++
T Consensus 42 ~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~ 116 (410)
T PRK06290 42 PDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSK 116 (410)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHH
Confidence 47789999999976 4567888888888775444456864 899999999999999988887 8886 799999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~ 199 (421)
+++..++.+++++||.|++++|+|..+...++..|++++.++++.++++.+|++++++.+.++++++++++||||||.++
T Consensus 117 ~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v~ 196 (410)
T PRK06290 117 PALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAVA 196 (410)
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcCC
Confidence 99999999999999999999999999999999999999999987777788899999998887899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
|.+++++|+++|++||++||+||+|.++.+++.. .++..+.. .+++|+++||||.|+++|+|+||++++ +
T Consensus 197 s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~--------~ 267 (410)
T PRK06290 197 TKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGN--------E 267 (410)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcCCCccccEEEEeechhhcCCchhheEeEEeC--------H
Confidence 9999999999999999999999999998876532 23333332 356799999999999999999999985 3
Q ss_pred HHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631 279 RIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 279 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
++++.+...... ..+++.+.|.++..+|++ ..+.++.+++++++++.+.+.|++. |+. +..|++++|+|++++..
T Consensus 268 ~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~~ 343 (410)
T PRK06290 268 LIVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPKG 343 (410)
T ss_pred HHHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCCc
Confidence 567777665432 345566888888888875 3567888999999999999999987 777 55788999999998753
Q ss_pred cccC--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631 358 LLEG--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 358 ~~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~ 417 (421)
...+ ..++.+++..|+++.++.+.||..|+ +++||+++ .++|+-++++++|.+.+..+
T Consensus 344 ~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 344 TKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred cccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 2100 02467888888887788888987664 79999998 47789999999999988764
No 36
>PLN02231 alanine transaminase
Probab=100.00 E-value=9.1e-50 Score=387.95 Aligned_cols=381 Identities=20% Similarity=0.335 Sum_probs=299.6
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--C-CCCCCCCCCCCHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--A-EFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~y~~~~g~~~l~~~ia 96 (421)
.+.++.-+|+++...+ .+++|+|+.+.+. +|. .+++...+.+.. + ....|+++.|++++|++|+
T Consensus 112 ~~~~~~~~r~v~~~~~-------~p~~i~~~~~~~~----fp~--~~i~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaIA 178 (534)
T PLN02231 112 GQQPITFFREVLALCD-------HPSLLDKSETHGL----FSA--DAIERAWQILDQIPGRATGAYSHSQGIKGLRDAIA 178 (534)
T ss_pred CCCccHHHHHHHHhcc-------CCccCCCCCcccc----CCH--HHHHHHHHHHHhcCCccccCcCCCCCcHHHHHHHH
Confidence 3445566666665443 4688888865433 333 455555556654 2 3567999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+|+.+++|.++++++|++|+|+++++..++++++ .+||.|+++.|+|+.|...+...|++++.++++.+++|++|++++
T Consensus 179 ~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~L 258 (534)
T PLN02231 179 AGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISEL 258 (534)
T ss_pred HHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHH
Confidence 9999988999999999999999999999999998 489999999999999999999999999999998777899999999
Q ss_pred Hhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccC-------
Q 014631 176 EALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFG------- 241 (421)
Q Consensus 176 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~------- 241 (421)
++.+++ ++++++++||+||||.+++.+++++|+++|++||++||+||+|.++.|. +..+.++..+.
T Consensus 259 e~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~ 338 (534)
T PLN02231 259 KKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGE 338 (534)
T ss_pred HHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhcccc
Confidence 998754 5788999999999999999999999999999999999999999999985 34444443331
Q ss_pred CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-----c-hh--
Q 014631 242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-----K-ED-- 312 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~~-- 312 (421)
...++++++||||.| +++|+|+||+++.... +++++.+........+++...|.++..+++.. . +.
T Consensus 339 ~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~-----~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~~ 413 (534)
T PLN02231 339 KDISLVSFQSVSKGYYGECGKRGGYMEVTGFT-----SDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESYM 413 (534)
T ss_pred CCceEEEEeccCcccccCCccceEEEEEecCC-----HHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHHH
Confidence 123689999999975 7899999999874211 35667666554444567778888888888531 1 12
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC--cccc-----cCCCChHHHHHHHHhhcCeeEEeCC
Q 014631 313 -FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN--LSLL-----EGISDDMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 313 -~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~ll~~~gv~v~~g~ 384 (421)
+.+++++.++++++.+.+.|++++|+. +..|++|+|+|+++. .... .+...+..++.+++++.||+++||+
T Consensus 414 ~~~~~i~~~~~~r~~~l~~~L~~~~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs 492 (534)
T PLN02231 414 AEKDGILSSLARRAKTLEDALNSLEGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGS 492 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCc
Confidence 233457889999999999999988998 558999999996553 2110 0011244566778888999999999
Q ss_pred CCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 385 AVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 385 ~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.|+. ..++|+++..+++++++++++|.++++++-+
T Consensus 493 ~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~ 530 (534)
T PLN02231 493 GFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMD 530 (534)
T ss_pred ccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9975 3469999999999999999999999887654
No 37
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.1e-49 Score=376.56 Aligned_cols=384 Identities=27% Similarity=0.479 Sum_probs=322.0
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..+++.+++.++++....++.. ..+.++++|+.|.|. +++++.+.+++.+.+.... ..|++..|..+||++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~ia 78 (393)
T PRK05764 6 KRVSRVTPSATLAVTAKAKELK--AQGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELREAIA 78 (393)
T ss_pred hhhhhcCchHHHHHHHHHHHHH--hccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHHH
Confidence 4566777888888777665432 236789999999976 4667899999988887643 46999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
+++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.+++.++.++++++.+|+++++
T Consensus 79 ~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 158 (393)
T PRK05764 79 AKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLE 158 (393)
T ss_pred HHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHH
Confidence 99998888788899999999999999999999999999999999999999999999999999999876667889999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc--CCCCCEEEEccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF--GSTVPVITLGSMSK 254 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK 254 (421)
+.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..+ +..+++++++||||
T Consensus 159 ~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK 238 (393)
T PRK05764 159 AAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSK 238 (393)
T ss_pred HhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcc
Confidence 9988888999999999999999999999999999999999999999999988766543344443 33457899999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.++++|+|+||++++ +++.+.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|+
T Consensus 239 ~~~~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~ 309 (393)
T PRK05764 239 AYAMTGWRLGYAAGP--------KELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGLN 309 (393)
T ss_pred cccCccceeEEEecC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999975 356777766543 3457788999998888863 457788888999999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+++++. +..|.+++|+|+.++........++.++...+++++||.+.||..|+..+++|+|++.+++++++++++|.++
T Consensus 310 ~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~~ 388 (393)
T PRK05764 310 EIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIERF 388 (393)
T ss_pred hCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence 988888 5578889999998875321101124677777878889999999988778999999998999999999999999
Q ss_pred HHHh
Q 014631 414 CQRH 417 (421)
Q Consensus 414 ~~~~ 417 (421)
++++
T Consensus 389 ~~~~ 392 (393)
T PRK05764 389 LESL 392 (393)
T ss_pred HHhh
Confidence 8764
No 38
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.4e-49 Score=380.53 Aligned_cols=359 Identities=21% Similarity=0.279 Sum_probs=289.7
Q ss_pred HHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631 29 SALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELP 104 (421)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~ 104 (421)
.+..+.++...+..++++++|+.|+|. +++++.+.+++.+.+... ....|++..|.++||+++++|+.+.+|
T Consensus 19 ~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g 94 (409)
T PRK07590 19 EIARRVNAFREANPEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARG 94 (409)
T ss_pred HHHHHHHHHhhhcCCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 344444444333346789999999977 467788899998887652 345899999999999999999988889
Q ss_pred CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce-----------eEeeeccCCCCccCCHH
Q 014631 105 CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE-----------IRHFDLLPEKGWEVDLD 173 (421)
Q Consensus 105 ~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~d~e 173 (421)
+++++++|++|+|+++++.++. .++.+||+|++++|+|..+...++..|.+ ++.++++.++++.+|.+
T Consensus 95 ~~~~~~~I~it~Ga~~al~~l~-~~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~ 173 (409)
T PRK07590 95 CDISADEIFISDGAKCDTGNIL-DIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELP 173 (409)
T ss_pred CcCChhhEEECCCHHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCc
Confidence 8999999999999999999875 45589999999999999999999999986 88888765555555533
Q ss_pred HHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccc
Q 014631 174 GLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSM 252 (421)
Q Consensus 174 ~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~ 252 (421)
+ ++++++++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++|+++||
T Consensus 174 ~------~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~Sf 247 (409)
T PRK07590 174 E------EKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSF 247 (409)
T ss_pred c------cCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecC
Confidence 2 57889999999999999999999999999999999999999999998876643344555543 3468999999
Q ss_pred ccccCCCCceEEEEEeeCCCcchhHHHHHHH------------Hhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDS------------IKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~------------~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
||.|+++|+|+||+++++ ++++. +.... ....+++.+.|.++..++......++++.++
T Consensus 248 SK~~~~pGlRiG~~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~ 319 (409)
T PRK07590 248 SKTAGFTGTRCAYTVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELID 319 (409)
T ss_pred ccccCCcCceeEEEEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 999999999999999963 34441 11111 1223578889999888886434578888899
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA 397 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~ 397 (421)
.++++++.+.+.|+++ ++. +..|.+++|+|++++.. .++.+++..+++++||.+.||..|+. .+++|||+.
T Consensus 320 ~~~~~r~~l~~~L~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~ 392 (409)
T PRK07590 320 YYMENAKIIREGLESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAF 392 (409)
T ss_pred HHHHHHHHHHHHHHhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEcc
Confidence 9999999999999987 777 54678999999999742 14567888887888999999998865 469999987
Q ss_pred CCHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAF 413 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~ 413 (421)
.+++++++++++|.++
T Consensus 393 ~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 393 GSRENVLEAMERIKKA 408 (409)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 8899999999999875
No 39
>PRK07324 transaminase; Validated
Probab=100.00 E-value=7.2e-50 Score=377.37 Aligned_cols=347 Identities=23% Similarity=0.377 Sum_probs=298.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+..+++|+.|+|. ++.|+.+ +++.+.+.... ..|++..|.++||++++++++ .+++++|++|+|++++
T Consensus 24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKK-LTYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA 92 (373)
T ss_pred ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCC-ccCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence 47899999999976 4566667 78877777644 489999999999999999985 3678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+.+++.+++++||+|+++.|+|..+...++..|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.+++.
T Consensus 93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~ 172 (373)
T PRK07324 93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR 172 (373)
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999998877778899999999888889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+++|++||+++|+||+|.++.+++. ..++... .+++|+++||||.|+++|+|+||++++ ++++
T Consensus 173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~--------~~li 241 (373)
T PRK07324 173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAAN--------EEVI 241 (373)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecC--------HHHH
Confidence 9999999999999999999999999887643 2233222 356899999999999999999999985 3577
Q ss_pred HHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 282 DSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 282 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
+.+...... +.+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++.+++. +..|.+|++.|+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~--- 316 (373)
T PRK07324 242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD--- 316 (373)
T ss_pred HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence 777776543 346777888888888863 456778888899999999999999877777 44889899989888753
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++.+++.++++++||.+.||..|+.++++|+|++.+++.+++++++|.++++++
T Consensus 317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 2577888888888999999999998889999999988999999999999999765
No 40
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=3.3e-49 Score=375.85 Aligned_cols=372 Identities=24% Similarity=0.362 Sum_probs=304.6
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..++...+..+....+ +..+++|+.|.|. .+.|+.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~ 75 (387)
T PRK08912 8 FADLPTTIFEVMSQLAR-------EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAH 75 (387)
T ss_pred HhhCCCCHHHHHHHHHh-------hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence 34444455555444333 4678999999987 345677888887776543 45799999999999999999
Q ss_pred HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
+++.+|+.++++ +|++|+|+++++..++..++++||+|++++|+|..+...++..|++++.+++++ +++++|++++++
T Consensus 76 ~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~ 154 (387)
T PRK08912 76 YARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAA 154 (387)
T ss_pred HHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHH
Confidence 998888888998 999999999999999999999999999999999999999999999999998753 357899999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.+.++++++++++||||||.++|.+++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.|
T Consensus 155 ~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 234 (387)
T PRK08912 155 AFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIF 234 (387)
T ss_pred HhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhc
Confidence 98888899999999999999999999999999999999999999999998887644444444432 46789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++++.+...... ..+.++..|.++..++.. .+.++++.+++++++++.+.+.|++.
T Consensus 235 g~~GlRiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~ 305 (387)
T PRK08912 235 SLTGWKVGFVCAA--------PPLLRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI 305 (387)
T ss_pred cCcCceeEEEecC--------HHHHHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999985 3566766655432 235566678887777753 35678888999999999999999987
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
|+. +..|.+++|+|+.++.... ..++.+++..+++++||.+.||..|+. .+++|++++.+++++++++++|.
T Consensus 306 -g~~-~~~~~g~~~l~~~l~~~~~--~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~ 381 (387)
T PRK08912 306 -GFP-VLPSQGTYFLTVDLAPLGL--AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLA 381 (387)
T ss_pred -CCc-ccCCCcceEEEecccccCC--CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHH
Confidence 777 5578889999998864210 124677888887888999999998843 47999999988999999999999
Q ss_pred HHHHH
Q 014631 412 AFCQR 416 (421)
Q Consensus 412 ~~~~~ 416 (421)
+++++
T Consensus 382 ~~l~~ 386 (387)
T PRK08912 382 AARRR 386 (387)
T ss_pred HHHhc
Confidence 88753
No 41
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.8e-49 Score=376.92 Aligned_cols=365 Identities=22% Similarity=0.390 Sum_probs=299.3
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014631 22 TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS 101 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~ 101 (421)
++.+.++.+...+.+. ...++.++++|+.|.|. +++++.+.+++.+.+.. ...|++..|.+++|+++|+|+++
T Consensus 7 ~~~~~~~~~~~~~~~~-~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~ 79 (393)
T TIGR03538 7 LQPYPFEKLAALLAGV-TPPASKPPIALSIGEPK----HPTPAFVLEALRENLHG--LSTYPTTKGLPELRQAIARWLER 79 (393)
T ss_pred CCccHHHHHHHHHHhh-hhhcCCCeEEecCCCCC----CCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHH
Confidence 3344555555554332 12247899999999977 46788999999987653 46899999999999999999999
Q ss_pred hCCCC--CCCC-cEEEcCCHHHHHHHHHHHhcCCCCe--EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 102 ELPCK--LSPD-DVYLTAGCKQAIQVILTVLARPGAN--ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 102 ~~~~~--~~~~-~i~~~~g~~~al~~~~~~l~~~gd~--Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
.+|++ ++++ +|++|+|+++++..++++++++||. |++++|+|..+...++..|++++.++++.+++|.+|+++++
T Consensus 80 ~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 159 (393)
T TIGR03538 80 RFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVP 159 (393)
T ss_pred hhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHH
Confidence 88775 6775 7999999999999999999999986 99999999999999999999999999876777889999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Ccccc----ccc--CCCCCEEEE
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRM----GVF--GSTVPVITL 249 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~----~~~--~~~~~~i~~ 249 (421)
+.+.++++++++++||||||.+++.+++++|+++|++||++||+||+|..+.+++. ...+. ... +..++++++
T Consensus 160 ~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i 239 (393)
T TIGR03538 160 ESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVF 239 (393)
T ss_pred HHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEE
Confidence 88877889999999999999999999999999999999999999999999887642 22111 111 134689999
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
+||||.|+++|+|+||++++ +++++.+..... ...+.+.+.|.++...+.. +.++++.++.++++++.+
T Consensus 240 ~S~SK~~~~~GlRvG~~i~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~ 309 (393)
T TIGR03538 240 HSLSKRSNLPGLRSGFVAGD--------AEILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAV 309 (393)
T ss_pred ecchhhcCCcccceEEEecC--------HHHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHH
Confidence 99999989999999999985 356777766553 2346778888888777753 567888899999999999
Q ss_pred HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEecCCH
Q 014631 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITFAIEP 400 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~~~~~ 400 (421)
.+.|+++ +. +..|.+|+|+|++++. ++.+++..+++++||.+.||+.|+. .+++||+++.++
T Consensus 310 ~~~L~~~--~~-~~~p~gg~f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~ 379 (393)
T TIGR03538 310 LEILGQV--LD-LELPDAGFYLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPL 379 (393)
T ss_pred HHHHHhh--Cc-ccCCCeeEEEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCH
Confidence 9999875 34 3478999999999971 3567887877888999999998852 368999999889
Q ss_pred HHHHHHHHHHHHH
Q 014631 401 SALEEGLGRIKAF 413 (421)
Q Consensus 401 e~l~~~~~~l~~~ 413 (421)
+++++++++|+++
T Consensus 380 ~~l~~~l~~l~~~ 392 (393)
T TIGR03538 380 EECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999875
No 42
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=8.9e-49 Score=372.24 Aligned_cols=372 Identities=24% Similarity=0.462 Sum_probs=309.2
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++......++++...+.. .+.+++|+.|.|. ++.++.+.+++.+.+... ...|++..|.++||+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia~ 76 (387)
T PRK07683 8 RVKDIQISGIRQFSNMVQN------YDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAACN 76 (387)
T ss_pred HHHhCCccHHHHHHHHHHh------cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence 3444555666676665432 4678999999976 466788999999988753 4589988999999999999
Q ss_pred HHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 98 YLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 98 ~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
++++.+|+.++++ +|++|+|+++++.+++++++++||+|+++.|+|..+...++..|+++++++.+ ++++.+|.++++
T Consensus 77 ~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~l~ 155 (387)
T PRK07683 77 FVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTR-STGFRLTAEALE 155 (387)
T ss_pred HHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecC-cccCCCCHHHHH
Confidence 9998888888898 99999999999999999999999999999999999999999999999999875 356778899999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKR 255 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~ 255 (421)
+.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+.+.. .++..+ +..+++++++||||.
T Consensus 156 ~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK~ 234 (387)
T PRK07683 156 NAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVINGLSKS 234 (387)
T ss_pred HhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEeecccc
Confidence 988888899999999999999999999999999999999999999999998876533 344444 334579999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|++||+|+||++++ +++++.+...... ..+++.+.|.++..+|.. ...+.++.+++++++++.+.+.|++
T Consensus 235 ~~~pGlRiG~i~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (387)
T PRK07683 235 HSMTGWRIGFLFAP--------SYLAKHILKVHQYNVTCASSISQYAALEALTA-GKDDAKMMRHQYKKRRDYVYNRLIS 305 (387)
T ss_pred ccCccceeEEEEcC--------HHHHHHHHHHHHhccCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999986 3566766654332 345677889999888875 3456778888999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
. ++. +..|++++|+|+.++... .++.+++..+++++||.+.||..|+. .+++||+++.+++++.+++++|.+
T Consensus 306 ~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~~ 379 (387)
T PRK07683 306 M-GLD-VEKPTGAFYLFPSIGHFT----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLEA 379 (387)
T ss_pred c-CCc-ccCCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 7 776 557889999998886421 14667777778889999999998865 479999999889999999999999
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
++.+-
T Consensus 380 ~l~~~ 384 (387)
T PRK07683 380 FLQQK 384 (387)
T ss_pred HHHhh
Confidence 88653
No 43
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.9e-49 Score=374.34 Aligned_cols=349 Identities=22% Similarity=0.418 Sum_probs=293.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a 121 (421)
..++|+|+.|.|. +++++.+.+++.+.+... ...|++..|++++|+++++++++.+|...++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 4678999999976 467888999998887654 3589999999999999999999988877665 689999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++++++++||+|++++|+|..+...++..|.+++.++++. +++.+|++.+++.++++++++++++||||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 357899999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|++||+++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||++++ +++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~--------~~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAP--------AEL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecC--------HHH
Confidence 99999999999999999999999998887654434444432 457999999999999999999999986 356
Q ss_pred HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
++.+..... ...+++.+.|.++..+|+.. .+..+.++.++++++.+.+.|++. |+. +..|.+|+|+|++++...
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~- 328 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS- 328 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence 677766553 23467889999999988752 234457788999999999999987 777 557889999998886321
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
+ ..+.+++.++++++||.+.||..|+. .+++||+++.+++++++++++|.+
T Consensus 329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 0 13567777788889999999998853 468999999889999999999865
No 44
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1e-48 Score=374.39 Aligned_cols=379 Identities=26% Similarity=0.454 Sum_probs=309.6
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+.....+.++.+........ ..+..+++|+.|.|. ++.++.+.+++.+... ....|++..|.+++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~ 78 (397)
T PRK07568 7 VLNMPASPIRKLVPYADEAK--KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKY 78 (397)
T ss_pred hhhCCcchHHHHHHHHHHHH--hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHH
Confidence 33444566777665443211 125679999999976 4567888888877653 245799999999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC-CHHHHHh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV-DLDGLEA 177 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~-d~e~l~~ 177 (421)
+. .+|.++++++|++|+|+++++..++..++++||+|++++|+|..+...++..|.+++.++.+.++++.. +++++++
T Consensus 79 ~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~ 157 (397)
T PRK07568 79 YK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEK 157 (397)
T ss_pred HH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHH
Confidence 98 467788999999999999999999999999999999999999999888899999999998865555543 6799999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..++. .+++++++||||.|
T Consensus 158 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~ 237 (397)
T PRK07568 158 LITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY 237 (397)
T ss_pred hcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc
Confidence 88888999999999999999999999999999999999999999999999887654444444443 56899999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
+++|+|+||+++++ +++++.+........+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++++
T Consensus 238 ~~~G~R~G~~~~~~-------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (397)
T PRK07568 238 SACGARIGCLISKN-------KELIAAAMKLCQARLSPPTLEQIGAAALLDT-PESYFDEVREEYKKRRDILYEELNKIP 309 (397)
T ss_pred cCCCcceEEEecCC-------HHHHHHHHHHhhccCCCCcHHHHHHHHHhhC-CHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999853 2455655444332346788899999999974 357888889999999999999999887
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh-----cCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----KNWLRITFAIEPSALEEG 406 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~ 406 (421)
++. +..|.+|+|+|++++.. ++.++..+++++ +||.+.||..|+. ++++|++++.++++++++
T Consensus 310 ~~~-~~~p~g~~~~~~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~ 382 (397)
T PRK07568 310 GVV-CEKPKGAFYIIAKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRA 382 (397)
T ss_pred Cce-ecCCCcceEEEEecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHH
Confidence 777 55789999999998742 456777777654 6999999998832 369999999888999999
Q ss_pred HHHHHHHHHHhhhcC
Q 014631 407 LGRIKAFCQRHAKQQ 421 (421)
Q Consensus 407 ~~~l~~~~~~~~~~~ 421 (421)
+++|.++++++.+++
T Consensus 383 ~~~l~~~l~~~~~~~ 397 (397)
T PRK07568 383 MEILKEALEKYNKRK 397 (397)
T ss_pred HHHHHHHHHHhhccC
Confidence 999999999887764
No 45
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=1.3e-48 Score=371.59 Aligned_cols=373 Identities=25% Similarity=0.451 Sum_probs=304.0
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..+....++.+..... ..+++++|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 79 (391)
T PRK07309 11 LDKIEVSLIRQFDQSIS------DIPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAADF 79 (391)
T ss_pred hhhcCccHHHHHHHHHH------hcCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHH
Confidence 44444445555554332 13679999999976 455788888988887643 34798999999999999999
Q ss_pred HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++..+|+.+++ ++|++|+|+++++++++.+++++||+|++++|+|.++...++..|.+++.++.+ ++++.+|++.+++
T Consensus 80 ~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~ 158 (391)
T PRK07309 80 VKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTT-ENDFVLTPEMLEK 158 (391)
T ss_pred HHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecC-CcCCcCCHHHHHH
Confidence 99888877765 789999999999999999999999999999999999999999999999998864 3457799999998
Q ss_pred hhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 178 LADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 178 ~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
.++. +++++++++|+||||.+++.+++++|+++|++||+++|+|++|+++.+.+....++..+. .+++++++||||
T Consensus 159 ~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~SK 237 (391)
T PRK07309 159 AILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGLSK 237 (391)
T ss_pred HhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecChh
Confidence 8753 578999999999999999999999999999999999999999999988665444444433 357999999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.|+++|+|+||++++ +++++.+..... ...+++.+.|.++..+++.. ..+....++.++++++.+.+.|+
T Consensus 238 ~~g~~GlRvG~~v~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~ 308 (391)
T PRK07309 238 SHAMTGWRIGLIFAP--------AEFTAQLIKSHQYLVTAATTMAQFAAVEALTNG-KDDALPMKKEYIKRRDYIIEKMT 308 (391)
T ss_pred hccCccceeEEEEeC--------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhCC-hhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 357777765543 23467888999999998753 23345667788899999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
+. ++. +..|++|+|+|++++... ..++.+++..+++++||.+.||..|+. ++++|++++.+.+++++++++|+
T Consensus 309 ~~-~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~l~ 383 (391)
T PRK07309 309 DL-GFK-IIKPDGAFYIFAKIPAGY---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKRLK 383 (391)
T ss_pred HC-CCe-ecCCCeeEEEEEECCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 87 777 557889999999887431 013567777788889999999998865 57999999988899999999999
Q ss_pred HHHHHhh
Q 014631 412 AFCQRHA 418 (421)
Q Consensus 412 ~~~~~~~ 418 (421)
++++++.
T Consensus 384 ~~~~~~~ 390 (391)
T PRK07309 384 EYMEEHA 390 (391)
T ss_pred HHHHhhc
Confidence 9997764
No 46
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=6e-49 Score=345.75 Aligned_cols=357 Identities=25% Similarity=0.422 Sum_probs=310.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..+++.+-+.+ ..++.||.+++|+++.++.+.. +|+ .+-.++-+++++|..++++...+++.|++++|...++
T Consensus 24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 46777777776 4489999999999999998643 775 4557899999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhhccC-ceEEEEeCCCCCcccccC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADEN-TVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~~-~~~i~~~~p~nptG~~~~ 200 (421)
..+++.+.++||.|++..|.|+++....+..|.++...|+.. +..|.+|+++||+++.+. .+..++||||||||.+++
T Consensus 97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence 999999999999999999999999999999999999999864 445889999999987654 588999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC--CCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST--VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.++|.+|.++|.+||++||+||+|+++.+.|+...++..++.. ++.+.+.|.||+|..+|+.+++++.+++... .
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr---~ 253 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELR---A 253 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHH---H
Confidence 9999999999999999999999999999999777777666553 7889999999999999999999999864311 1
Q ss_pred HHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCcc
Q 014631 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
.+.+++.. ....++|.++..|..++.+. .+.|+++..++++.+++++.+.+.+ +|++. +..|++++..|+++...
T Consensus 254 ~~~~~l~~--~~~~~~n~lg~~A~~aAY~~-G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~r~l 329 (388)
T COG1168 254 KFLKRLKR--NGLHGPSALGIIATEAAYNQ-GEPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDCREL 329 (388)
T ss_pred HHHHHHHH--hcCCCCchHHHHHHHHHHHh-chHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeecccc
Confidence 22333332 23458999999999999985 6799999999999999999999996 69999 66999999999999875
Q ss_pred cccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 358 LLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.. ++.+....++.+.+|.+.+|..||. .+++|++++++++-+++++++|..++++.
T Consensus 330 ~l----~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 330 GL----DDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred CC----ChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 43 4567788899999999999999987 47899999999999999999999888654
No 47
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=4.9e-49 Score=374.12 Aligned_cols=350 Identities=21% Similarity=0.346 Sum_probs=297.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a 121 (421)
+.++|+|+.|.|+ ++.++.+.+++.+.+... ...|++..|.+++|+++++++++.+|...+++ +|++|+|++++
T Consensus 29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a 103 (386)
T PRK09082 29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA 103 (386)
T ss_pred hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence 4678999999876 456788899998887653 35799899999999999999998888777775 79999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++.+++++||+|++++|+|.++...++..|.+++.++++. +++.+|++++++.++++++++++++|+||||.+++.
T Consensus 104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 182 (386)
T PRK09082 104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA 182 (386)
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999999854 357899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|++||+++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++ +++
T Consensus 183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~--------~~l 254 (386)
T PRK09082 183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP--------AAL 254 (386)
T ss_pred HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC--------HHH
Confidence 99999999999999999999999999887654444444433 468999999999999999999999985 357
Q ss_pred HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
++.+..... ...+++.+.|.++..+++. .+.++++.++.++++++.+.+.|++. ++. +..+++|+|+|++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~-- 329 (386)
T PRK09082 255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI-- 329 (386)
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence 777766643 3456788999998888863 45778888899999999999999986 777 55788999999998741
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
++ .++.+++.++++++||.+.||+.|+. .+++|+|++.+++++++++++|++
T Consensus 330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 01 24678888888899999999998742 468999999889999999999875
No 48
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=1.9e-48 Score=370.75 Aligned_cols=371 Identities=24% Similarity=0.402 Sum_probs=305.9
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
++.++...++++..... ..++++|+.|.|.. +.++.+.+++.+.+... ...|++..|.+++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~ 73 (387)
T PRK07777 6 LRPFGTTIFAEMSALAV-------RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQ 73 (387)
T ss_pred hhhcCccHHHHHHHHHh-------hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 44555666777776654 45889999999873 34566778877777653 35799889999999999999
Q ss_pred HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHH
Q 014631 99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLE 176 (421)
Q Consensus 99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~ 176 (421)
+.+.+|...+++ +|++|+|+++++.+++..++++||+|+++.|+|.++...+...|.+++.++.+++ +++.+|+++++
T Consensus 74 ~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~ 153 (387)
T PRK07777 74 RRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALR 153 (387)
T ss_pred HHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHH
Confidence 998888887776 7999999999999999999999999999999999999999999999999988665 36789999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKR 255 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~ 255 (421)
+.+.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+.+....++..++. .+++++++||||.
T Consensus 154 ~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 233 (387)
T PRK07777 154 AAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKT 233 (387)
T ss_pred HhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhh
Confidence 988888999999999999999999999999999999999999999999998886654444444432 4578999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|+|+||++++ +++++.+..... ...+.+.+.|.++..++.. .+.+.++.++.++++++.+.+.|++
T Consensus 234 ~g~~GlRiG~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 304 (387)
T PRK07777 234 FNVTGWKIGWACGP--------APLIAAVRAAKQYLTYVGGAPFQPAVAHALDH-EDAWVAALRDSLQAKRDRLAAGLAE 304 (387)
T ss_pred ccCcCceeEEEecC--------HHHHHHHHHHHhhcccCCCCHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999985 356666665543 2335667778888888864 3577888889999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+ ++. +..|++++|+|++++... ..++.+++..+++++||.|.||..|+. .+++|++++.+++++++++++
T Consensus 305 ~-~~~-~~~~~g~~~~~~~~~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~ 379 (387)
T PRK07777 305 A-GFE-VHDSAGTYFLCADPRPLG---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRR 379 (387)
T ss_pred C-CCC-ccCCCcceEEEecccccC---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHH
Confidence 7 777 557888999998875311 124678888887888999999998753 358999999889999999999
Q ss_pred HHHHHH
Q 014631 410 IKAFCQ 415 (421)
Q Consensus 410 l~~~~~ 415 (421)
|.++..
T Consensus 380 l~~~~~ 385 (387)
T PRK07777 380 LRALRG 385 (387)
T ss_pred HHHHhc
Confidence 988754
No 49
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=2.5e-48 Score=369.75 Aligned_cols=374 Identities=24% Similarity=0.325 Sum_probs=308.0
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+.++.+..++.+...+...- ..+.+.++|+.|.|. .++++.+.+++.+.+.......|++..|.++||++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~--~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~ 79 (386)
T PRK07550 6 IAALFPPPIPEVRAWLAGYD--GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAH 79 (386)
T ss_pred hhhcCChHHHHHHHHHHHHh--hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHH
Confidence 33344556677776554322 236789999999976 356788889888877554456798889999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+++.+|...++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|++++.++.++++++.+|++++++.
T Consensus 80 ~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l~~~ 159 (386)
T PRK07550 80 YSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAAEAL 159 (386)
T ss_pred HHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHHHHH
Confidence 99988888999999999999999999999999999999999999999999999999999999987666778899999999
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccC
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWI 257 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~ 257 (421)
++++++++++++|+||||.++|.+++++|+++|++||++||+||+|+++.+++....++... +..++++++.||||.|+
T Consensus 160 ~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 239 (386)
T PRK07550 160 ITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYA 239 (386)
T ss_pred hcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhcc
Confidence 98889999999999999999999999999999999999999999999986543322222222 23457899999999999
Q ss_pred CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
++|+|+||++++ +++++.+..... ...+++.+.|.++..+++. .+.+.++.++.++++++.+.+.|.+++
T Consensus 240 ~~G~RiG~i~~~--------~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 310 (386)
T PRK07550 240 LTGHRVGAVVAS--------PARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFARLP 310 (386)
T ss_pred CcccceEeeecC--------HHHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999999985 246666665543 3456788899999888864 457778888899999999999999876
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRIKAF 413 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l~~~ 413 (421)
++. + .+.+++|+|+.++... .++.+++..+++++||.+.||..|+. .+++|++++ .+++++++++++|.++
T Consensus 311 ~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 311 GWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERLRAF 384 (386)
T ss_pred Cce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHHHhh
Confidence 665 3 4778999999986411 25778888888889999999998864 579999999 5789999999999875
No 50
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=8.5e-49 Score=378.32 Aligned_cols=361 Identities=21% Similarity=0.368 Sum_probs=290.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCCC--CCCC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILPARRAIADYLNSELPC--KLSP 109 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~--~~~~ 109 (421)
...+|+|+.+.+.. ..+.+.+.+.+.... .....|++..|.++||+++|+|+++.++. ++++
T Consensus 37 p~g~i~L~~~En~l-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 37 PSGIIQMGLAENQL-----SFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CCeeEEeehhHhHh-----hHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 44789999998542 225555555543220 12345888899999999999999987774 4689
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
++|++|+|+++++..++.++++|||.|++++|+|..+...+. ..|++++.++.+.++++.+|++++++.+.+ +
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~ 191 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK 191 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999987777 589999999987677888999999887743 6
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc---------CCCCCEEEEcccc
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---------GSTVPVITLGSMS 253 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~s~s 253 (421)
++++++++||||||.++|.+++++|+++|++||++||+||+|+++.|++..+.++... +..+++++++|||
T Consensus 192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S 271 (468)
T PLN02450 192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS 271 (468)
T ss_pred eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence 7899999999999999999999999999999999999999999988876544332211 2356899999999
Q ss_pred cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHH
Q 014631 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~ 331 (421)
|.|+++|+|+||+++++ +.+.+.+..... ..+.+.+.|.++..+|++.. ..++.+.+++++++++.+.+.
T Consensus 272 K~~~l~GlRiG~li~~~-------~~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~ 343 (468)
T PLN02450 272 KDLGLPGFRVGAIYSND-------EMVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG 343 (468)
T ss_pred ccCCCCCccEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999863 224444444432 23568899999999997643 246788899999999999999
Q ss_pred hhcCCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHH
Q 014631 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGL 407 (421)
Q Consensus 332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~ 407 (421)
|+++ |+. +..|.+|+|+|++++..... ......++...+++++||.+.||..|+. ++++|++++ .+++++++++
T Consensus 344 L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l 421 (468)
T PLN02450 344 LEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAM 421 (468)
T ss_pred HHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHH
Confidence 9988 887 55788999999998642110 1112345777788889999999998865 579999999 5899999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
++|++++.+..
T Consensus 422 ~ri~~~l~~~~ 432 (468)
T PLN02450 422 KRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHhcc
Confidence 99999987765
No 51
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=7.3e-48 Score=364.09 Aligned_cols=339 Identities=22% Similarity=0.381 Sum_probs=280.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+.++++|+.|.|. +++++.+.+++.+.... ...|++..|.++||+++++|+++++|.++++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~--~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~a 95 (374)
T PRK05839 22 KEYKGLDLTIGEPQ----FETPKFIQDALKNNAHL--LNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREV 95 (374)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHhhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHH
Confidence 37799999999977 46678888888876543 4689999999999999999999988988999999999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~ 199 (421)
+..++.+++ ++||.|++++|+|..+...+...|++++.++.+.+++|.+|+++.+ + ++++++++++||||||.++
T Consensus 96 l~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP~NPTG~~~ 172 (374)
T PRK05839 96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSPNNPTGRTL 172 (374)
T ss_pred HHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCCCCCcCccc
Confidence 999888764 5789999999999999999999999999999876667777765442 2 4689999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc------CCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF------GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG 273 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 273 (421)
+.+++++|+++|+++|++||+||+|.++.+++ ...++... ...+++++++||||.|++||+|+||++++
T Consensus 173 s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~---- 247 (374)
T PRK05839 173 SLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD---- 247 (374)
T ss_pred CHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC----
Confidence 99999999999999999999999999976433 22222211 12368999999999999999999999985
Q ss_pred chhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631 274 ILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 352 (421)
+++++.+..... ...+.+.+.|.++..++.. +.++++.+++++++++.+.+.| ++. .|++|+|+|+
T Consensus 248 ----~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p~gg~fi~~ 314 (374)
T PRK05839 248 ----ASILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IPPATFYVWL 314 (374)
T ss_pred ----HHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CCCeeEEEEE
Confidence 357777766543 2346677888888777753 5678888889999988887765 333 5789999999
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+++ +..+++.++++++||.+.||..|+. .+++|+|++.+++++.+++++|.++++
T Consensus 315 ~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 315 PVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred eCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 986 3567888877779999999988764 479999999889999999999998874
No 52
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-48 Score=371.04 Aligned_cols=354 Identities=25% Similarity=0.424 Sum_probs=302.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--C-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--E-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
+.+++|+.|.|.. ...+.....+++.+.+... . ...|++..|.++||+.+++++...+|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 8899999998663 2345566666776666432 2 457888899999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCC--CCCccc
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNP--GNPCGN 197 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p--~nptG~ 197 (421)
|++++++.+++|||+|++++|+|++...+++..|++++.+|++. .++|+|++++.+.. ++|++ ++.| |||||.
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~-y~~P~~qNPtG~ 242 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE---DGIDPEALEEALAQWKPKAV-YVTPTFQNPTGV 242 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEE-EECCCCCCCCCC
Confidence 99999999999999999999999999999999999999999862 35999999998876 45655 4444 899999
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
+||.++.++|+++|++||++||+||+|+.+.+++.+..++..++..+++|+++||||+ .+||+|+||++++
T Consensus 243 tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p-------- 313 (459)
T COG1167 243 TMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAP-------- 313 (459)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCC--------
Confidence 9999999999999999999999999999999998888788899988999999999999 5999999999997
Q ss_pred HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcC-C-CccccCCCCceeEEEEe
Q 014631 278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEI-P-CITCPRKPEGSMFVMVK 353 (421)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~-~-g~~~~~~~~~~~~~~~~ 353 (421)
+++++++...+. ...+++.+.|.+++..+..+. +.++.++++.++++++.+.++|.+. + .+. +..|.+|+|+|++
T Consensus 314 ~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~-~~~p~gG~flwl~ 392 (459)
T COG1167 314 PELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELAT-WTRPEGGLFLWLE 392 (459)
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCee-eecCCceEEEEEE
Confidence 367788877654 356888999999999998533 7889999999999999999999986 4 344 6789999999999
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCCC----CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVGM----KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++.. .+...++.. +.++||.+.| |..|.. .+++|++++ .+.+++++++.+|.+++++..+
T Consensus 393 l~~~-----~~~~~l~~~-a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 393 LPEG-----IDARELLAA-ALEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred cCCC-----CCHHHHHHH-HHHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 9864 246666665 4667999999 888865 348999999 7799999999999999987643
No 53
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=5.9e-48 Score=373.41 Aligned_cols=380 Identities=19% Similarity=0.340 Sum_probs=292.8
Q ss_pred hhhHHHHHHHHHHh-ccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHH
Q 014631 24 TLTVRSALTIIKQN-LKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILP 90 (421)
Q Consensus 24 ~~~~~~~~~~~~~~-~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~ 90 (421)
.+.....+..+... ++... ...+|+|+.+.-. ...+.+.+.+.+.... .....|++..|.++
T Consensus 24 ~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~-----l~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~ 98 (496)
T PLN02376 24 NSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQ-----LCLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKK 98 (496)
T ss_pred CCchHHHHHHHhCCCCCcccCCCceEEeecchhh-----hhHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHH
Confidence 34455544444442 33222 3468999988622 1223333444332211 22346888899999
Q ss_pred HHHHHHHHHhhhCC--CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCC
Q 014631 91 ARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKG 167 (421)
Q Consensus 91 l~~~ia~~l~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~ 167 (421)
||+++|+|+++.+| +.+++++|++|+|+++++..++.++++|||.|++++|+|.++...+. ..|++++.++++.+++
T Consensus 99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~ 178 (496)
T PLN02376 99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDN 178 (496)
T ss_pred HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCcc
Confidence 99999999998887 56899999999999999999999999999999999999999988776 5899999999876677
Q ss_pred ccCCHHHHHhhh------ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-
Q 014631 168 WEVDLDGLEALA------DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF- 240 (421)
Q Consensus 168 ~~~d~e~l~~~~------~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~- 240 (421)
+++|++++++++ ..+++++++++||||||.++|.+++++|+++|++||++||+||+|..+.|.+..+.++..+
T Consensus 179 ~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~ 258 (496)
T PLN02376 179 FKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVV 258 (496)
T ss_pred CcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhh
Confidence 889999997653 2367889999999999999999999999999999999999999999998877655554443
Q ss_pred ---CC----CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--h
Q 014631 241 ---GS----TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--E 311 (421)
Q Consensus 241 ---~~----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~ 311 (421)
+. .+++++++||||.|++||+|+||+++++ +.+.+.+..... ....+.+.|.++..+|+... +
T Consensus 259 ~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~-------~~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~ 330 (496)
T PLN02376 259 NDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFN-------DSVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVD 330 (496)
T ss_pred ccccccccCCCeEEEEEeccccCCCCcceEEEEEECC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHH
Confidence 11 1346778999999999999999999853 234444433332 33578899999999997633 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCC-
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGM- 388 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~- 388 (421)
.++.+.+++++++++.+.+.|++. ++. +..|.+|+|+|++++.... .......++...++++.||.+.||..|+.
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~ 408 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence 556677888999999999999986 777 4478999999999964311 00112356777777778999999999864
Q ss_pred -CCeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631 389 -KNWLRITFA-IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 389 -~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++++|||++ .+++++++++++|++++.+.+
T Consensus 409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 689999999 588999999999999997654
No 54
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=8.5e-48 Score=361.07 Aligned_cols=342 Identities=25% Similarity=0.423 Sum_probs=287.1
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQ 123 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~ 123 (421)
++++|+.|.|. +++++.+.+++.+.... ...|++..|.++||+++++|+++.+|++++++ +|++|+|+++++.
T Consensus 1 ~~~~~~~g~p~----~~~~~~~~~~~~~~~~~--~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~ 74 (350)
T TIGR03537 1 RLFDFGTGDPK----EPTPPFIRKALIDAVPE--VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIF 74 (350)
T ss_pred CeEeccCCCCC----CCCCHHHHHHHHHHHhc--cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHH
Confidence 36899999876 56678899999887653 46799889999999999999999889889998 9999999999999
Q ss_pred HHHHHhcCCC---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 124 VILTVLARPG---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 124 ~~~~~l~~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
.++..++++| |+|+++.|+|..+...++..|++++.++.+.++++.+|++++++++.++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 75 HFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAP 154 (350)
T ss_pred HHHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccC
Confidence 9999998887 6999999999999999999999999999876677889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++|++||+++|+||+|..+.+++. ..++...+ .+++++++||||.++++|+|+||++++ +++
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~--------~~~ 224 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFGEP-PHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGD--------EKL 224 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccCCC-CCchhhcC-cCCEEEEeecccccCCccccceeeecC--------HHH
Confidence 99999999999999999999999998766542 22333333 358999999999999999999999874 356
Q ss_pred HHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
.+.+...... ..+++.+.|.++.+++.. ..+..+.+++++++++.+.+.|++. |+. +..|.+|+|+|++++..
T Consensus 225 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~-- 298 (350)
T TIGR03537 225 ISFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG-- 298 (350)
T ss_pred HHHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC--
Confidence 6666665432 234555677777777653 4677888899999999999999987 777 55788899999999742
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.++.+++..|+ ++||.+.||..|+. .+++|++++.+++++++++++|++
T Consensus 299 ---~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 ---IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred ---CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 14667777765 57999999998865 579999998888999999998865
No 55
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=6.4e-48 Score=369.31 Aligned_cols=363 Identities=22% Similarity=0.379 Sum_probs=292.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-----------CCCCCCCCCCCCHHHHHHHHHHHhhhCC--CCCC
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-----------AEFDCYSPSVGILPARRAIADYLNSELP--CKLS 108 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~--~~~~ 108 (421)
+...+|+|+.+. |....+.+.+.+.+.... .....|.+..|.++||+++|+++++.+| .+++
T Consensus 45 np~g~i~l~~ae-----N~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~ 119 (447)
T PLN02607 45 NPSGVIQMGLAE-----NQVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFD 119 (447)
T ss_pred CCCceEEEechh-----hhhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcC
Confidence 355699999886 234566777777665331 1234578889999999999999998777 3588
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------ 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------ 181 (421)
+++|++|+|+++++..++.++++|||.|+++.|.|.++...+. ..|+++++++.+.+++|.+|++++++++.+
T Consensus 120 p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~ 199 (447)
T PLN02607 120 PDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANI 199 (447)
T ss_pred HHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999977665 579999999887677788999999988753
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-------CCCCCEEEEccccc
Q 014631 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-------GSTVPVITLGSMSK 254 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-------~~~~~~i~~~s~sK 254 (421)
++++++++|||||||.++|.+++++|+++|++||+++|+||+|.++.|++..+.++..+ +..++++++.||||
T Consensus 200 ~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK 279 (447)
T PLN02607 200 RVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSK 279 (447)
T ss_pred CeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchh
Confidence 67899999999999999999999999999999999999999999988876555554332 11467999999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l 332 (421)
.||++|+|+||+++.+ +++...+..... +..++.+.|.++..+|++.. +.++.+.+++++++++.+.+.|
T Consensus 280 ~fg~~GlRvG~ivs~n-------~~l~~~~~~~~~-~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L 351 (447)
T PLN02607 280 DLGLPGFRVGTIYSYN-------DKVVTTARRMSS-FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGL 351 (447)
T ss_pred cCCCCcceEEEEEEcC-------HHHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999843 345555554432 23567789999999997633 3567788899999999999999
Q ss_pred hcCCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHH
Q 014631 333 KEIPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLG 408 (421)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~ 408 (421)
++. |+. +..+.+|+|+|++++..... ......++..++++++||.+.||..|+. ++|+|++++ .++++++++++
T Consensus 352 ~~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~ 429 (447)
T PLN02607 352 RRA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALK 429 (447)
T ss_pred HhC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHH
Confidence 987 787 44788999999999642100 0011345666777888999999998865 689999999 48999999999
Q ss_pred HHHHHHHHhhh
Q 014631 409 RIKAFCQRHAK 419 (421)
Q Consensus 409 ~l~~~~~~~~~ 419 (421)
+|.+++++.+.
T Consensus 430 Ri~~~l~~~~~ 440 (447)
T PLN02607 430 RIHRFMDRRKT 440 (447)
T ss_pred HHHHHHHHHHh
Confidence 99999977643
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=3.1e-47 Score=362.91 Aligned_cols=355 Identities=20% Similarity=0.365 Sum_probs=295.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~a 121 (421)
+.++++|+.|.|.. +.++.+.+++.+.+.......|++..|.+++|+++++|+++.+|+.++++ +|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~ 103 (395)
T PRK08175 28 GEDIIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEG 103 (395)
T ss_pred CCCeEEcCCCCCCC----CCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHH
Confidence 68899999998773 45667778887777655557899999999999999999998888888887 79999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCCCCCcccc
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~ 198 (421)
++.++..+++|||+|++++|+|..+...++..|++++.++.+.++. +++++++.++ ++++++++++|+||||.+
T Consensus 104 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 104 LAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQC 180 (395)
T ss_pred HHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCCC
Confidence 9999999999999999999999999888899999999998865433 4677877665 367889999999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
++.+++++|+++|++||+++|+||+|.++.+++....++..++. .+.+++++||||.|++||+|+||++++
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~-------- 252 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGN-------- 252 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCC--------
Confidence 99999999999999999999999999998886654445444432 356788999999999999999999985
Q ss_pred HHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 278 LRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 278 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++++.+.+.... ..+++.+.|.++..++.. .+.++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus 253 ~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~~ 329 (395)
T PRK08175 253 PELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIPE 329 (395)
T ss_pred HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECCc
Confidence 4677777765532 345667788888888864 35678888999999999999999988 776 5578899999999975
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
... ..++.+++..+++++||.|.||..|+. ++++|++++.+++.+.+++++|.+++++.
T Consensus 330 ~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 330 PYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred ccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 320 013577887787889999999998865 46899999988999999999999998753
No 57
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-47 Score=366.46 Aligned_cols=374 Identities=20% Similarity=0.302 Sum_probs=286.8
Q ss_pred HHHHHHHHHHhccccCCC-------CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 27 VRSALTIIKQNLKENDPR-------PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
..++..+|...+.++.+. ++|+|+.|.|. +++|+.+.+++ +.+.. .+|+++.|.+++|+++++++
T Consensus 76 ~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lreaia~~~ 147 (527)
T PRK09275 76 KEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTEKIVKDY 147 (527)
T ss_pred cccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHHHHHHHH
Confidence 446777777777766543 57999999976 67788888854 44433 36999999999999999955
Q ss_pred h-hhCCCCC-C--CCcEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhcCcee--EeeeccCCCCc
Q 014631 100 N-SELPCKL-S--PDDVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHTRLEI--RHFDLLPEKGW 168 (421)
Q Consensus 100 ~-~~~~~~~-~--~~~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~--~~~~~~~~~~~ 168 (421)
. +.++... . +++|++|+|+++++..++.+ +++|||+|++++|+|+.|...+...|.++ +.++.+++++|
T Consensus 148 ~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f 227 (527)
T PRK09275 148 LRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEW 227 (527)
T ss_pred HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCC
Confidence 4 3333222 2 34899999999999999886 68999999999999999999988876555 44444456679
Q ss_pred cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631 169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246 (421)
Q Consensus 169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (421)
.+|+++++++++++++++++++||||||.+++.+++++|+++|++ +|++||+||+|..+.+. +.++... ..+++
T Consensus 228 ~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~-~~~~~ 303 (527)
T PRK09275 228 QYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV-LPYNT 303 (527)
T ss_pred CCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh-CCCCE
Confidence 999999999988899999999999999999999999999999964 59999999999998642 2232222 23589
Q ss_pred EEEcccccccCCCCceEEEEEeeCCCcchhHHHHH----------------------------HHH----hhh-cccccC
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV----------------------------DSI----KGY-LNISSG 293 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~----------------------------~~~----~~~-~~~~~~ 293 (421)
|++.||||.|+++|+|+||+++++.. ++ .+++ +++ ... ...+.+
T Consensus 304 I~v~SfSK~f~mtG~RlG~i~~~~~~-v~--~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~ 380 (527)
T PRK09275 304 ILVYSFSKYFGATGWRLGVIALHEDN-VF--DKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAG 380 (527)
T ss_pred EEEeehhhhccCcHhHHhhhhcCchh-HH--HHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999997531 11 1122 122 122 223457
Q ss_pred CchHHHHHH-----HHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc---------
Q 014631 294 PATFVQGAV-----PQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--------- 359 (421)
Q Consensus 294 ~~~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--------- 359 (421)
.+.+.|.++ .++++ ..+.+.++.++.++++++.+.+.|. . ++. ...|.+++|+|++++....
T Consensus 381 ~s~p~Q~a~al~~~~all~-~~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~~f~~ 456 (527)
T PRK09275 381 LSTPQQVQMALFSLFALLD-EEDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGKEFAD 456 (527)
T ss_pred CCCHHHHHHHHHHHHHHHh-CchHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCchhhh
Confidence 777888862 33454 3457888899999999999988883 2 232 2368999999998864210
Q ss_pred --cCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 360 --EGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 360 --~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
....++.+++.+|+++.||.+.||..|+. ++++|+|++ .+++++.+++++|++++.++.+
T Consensus 457 ~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 457 YLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred hhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 01125788999999999999999999986 568999999 5889999999999999988754
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=1.3e-46 Score=359.28 Aligned_cols=344 Identities=20% Similarity=0.272 Sum_probs=276.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.+.++++|+.|.|. +++++.+.+++.+.+... ....|++..|.++||+++|+++.+. .+++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G 103 (402)
T TIGR03542 31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG 103 (402)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence 46889999999866 467888999998887652 2346988899999999999986431 378899999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCc-----------eeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL-----------EIRHFDLLPEKGWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i 186 (421)
+++++..++ .++.+||+|++++|+|..+...++..|+ +++.++.+.++++.++++. .++++++
T Consensus 104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i 177 (402)
T TIGR03542 104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII 177 (402)
T ss_pred cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence 999999865 4558999999999999999999999999 8888887655555555432 1468899
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEE
Q 014631 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
++++||||||.++|.+++++|+++|++||++||+||+|.++.+++....++..++. .+++++++||||.|++||+|+||
T Consensus 178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 99999999999999999999999999999999999999998876543334444443 35789999999999999999999
Q ss_pred EEeeCCCcchhHHHHH--------HHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 266 LVTSDPSGILQELRIV--------DSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
++++. +++ ..+... .....+++.++|.++..++......+..+.++.++++++.+.+.|++.
T Consensus 258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99963 232 222221 122335778899988888865344556677788999999999999986
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++. +..|.+++|+|++++.. .++.+++..+++++||.+.||+.|+. .+++|++++.+++++++++++|+++
T Consensus 329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 776 54677899999999742 24667888888888999999998865 4799999887899999999999875
No 59
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.9e-46 Score=354.32 Aligned_cols=370 Identities=22% Similarity=0.353 Sum_probs=295.8
Q ss_pred hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631 25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSE 102 (421)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~ 102 (421)
..+++++..........+..++++|+.|.|. +++++.+.+++.+.+... ....|++..|++++|+.+++++++.
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~ 89 (394)
T PRK06836 14 SWIRKMFEEGARLKAEYGADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRR 89 (394)
T ss_pred cHHHHHHHHHHHHHhhcCCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHH
Confidence 3455555444322112235678999999866 467889999998887642 2468988899999999999999998
Q ss_pred CCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631 103 LPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN 182 (421)
Q Consensus 103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~ 182 (421)
++..+++++|++|+|++++++.+++.++++||.|++++|+|..+...++..|.+++.++.+++ ++++|++++++.++++
T Consensus 90 ~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~ 168 (394)
T PRK06836 90 FGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPK 168 (394)
T ss_pred hCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcC
Confidence 888889999999999999999999999999999999999999999999999999999998643 4679999999999888
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHh------cCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARK------LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
++++++++|+||||.++|.+++++|+++|++ ||+++|+||+|.++.+++.....+.. ..+++++++||||.|
T Consensus 169 ~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~ 246 (394)
T PRK06836 169 TKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSL 246 (394)
T ss_pred ceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhc
Confidence 9999999999999999999999999999999 89999999999999876644333222 235789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
++||+|+||+++++.. .....+...+..... ...+++.+.|.++..++... ..++.++++++.+.+.|++
T Consensus 247 ~~pGlRiG~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~ 318 (394)
T PRK06836 247 SLPGERIGYIAVNPEM--EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTE 318 (394)
T ss_pred cCcceeeEEEecCHHH--hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHh
Confidence 9999999999986321 100112222222211 12356778888888888641 1256778888999999988
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+ |+. +..|.+|+|+|+.++.. +..+++. .+.++||.+.||..|+..+++||+++.+++++++++.+|++++
T Consensus 319 ~-g~~-~~~~~gg~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l 389 (394)
T PRK06836 319 L-GFE-CVKPQGAFYLFPKSPEE------DDVAFCE-KAKKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLA 389 (394)
T ss_pred C-CCE-eecCCceEEEEEeCCCC------CHHHHHH-HHHhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 7 777 55788899999988642 4566765 4577899999999998788999999989999999999999999
Q ss_pred HHhh
Q 014631 415 QRHA 418 (421)
Q Consensus 415 ~~~~ 418 (421)
+++.
T Consensus 390 ~~~~ 393 (394)
T PRK06836 390 KEYK 393 (394)
T ss_pred HHhc
Confidence 8764
No 60
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=2.6e-47 Score=363.62 Aligned_cols=370 Identities=19% Similarity=0.212 Sum_probs=284.4
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSA-FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
..++++.++.+...++... .+++|+|+.|.|.. ...+|..+.+.+++.+.++......|++..|.++||+++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~ 81 (396)
T PRK09257 6 EAAPADPILGLMEAFRADP----RPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQEL 81 (396)
T ss_pred CCCCCChHHHHHHHHhhCC----CcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHH
Confidence 3445666777666665422 35789999997531 111222478888888877654455899999999999999999
Q ss_pred HhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631 99 LNSELPCKLSPDDV--YLTAGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDG 174 (421)
Q Consensus 99 l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~ 174 (421)
+....+..+++++| ++|+|+++++.++++++ ++|||+|++++|+|..+...++..|++++.++....+++++|+++
T Consensus 82 ~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~ 161 (396)
T PRK09257 82 LFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDA 161 (396)
T ss_pred hcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHH
Confidence 97765545578887 99999999999998766 489999999999999999999999999999987434457899999
Q ss_pred HHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccC-CCCCEEEE
Q 014631 175 LEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFG-STVPVITL 249 (421)
Q Consensus 175 l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~~~i~~ 249 (421)
+++.+. +++.++++++||||||.++|.+++++|+++|++||++||+||+|.++.++. ....++..+. ..++++++
T Consensus 162 l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i 241 (396)
T PRK09257 162 MLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVA 241 (396)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEE
Confidence 998765 234556679999999999999999999999999999999999999987642 2223333333 23579999
Q ss_pred cccccccCCCCceEEEEEeeC-CCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSD-PSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDILR 322 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~ 322 (421)
+||||.|+++|+|+||+++.. +.... ..+...+.... ..+.+++.+.|.++..++.... ..++++.+++++
T Consensus 242 ~SfSK~~~~~GlRiG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~ 319 (396)
T PRK09257 242 SSFSKNFGLYGERVGALSVVAEDAEEA--DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIK 319 (396)
T ss_pred EEcCCcCccccccceeEEEEeCCHHHH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998521 11000 12344443332 2344678889999988887532 356777889999
Q ss_pred HHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-C
Q 014631 323 DTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-I 398 (421)
Q Consensus 323 ~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~ 398 (421)
++++.+.+.|+++. ++. +..|.+|+|+|++++ .+++.++++++||.+.|. + |++++ .
T Consensus 320 ~rr~~l~~~L~~~~~~~~~~-~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~ 380 (396)
T PRK09257 320 AMRQLLVEALKAKGPSRDFD-FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGL 380 (396)
T ss_pred HHHHHHHHHHHhcCCCCCcc-cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeC
Confidence 99999999999862 355 457999999998774 246677889999999873 1 99998 7
Q ss_pred CHHHHHHHHHHHHHHH
Q 014631 399 EPSALEEGLGRIKAFC 414 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~ 414 (421)
+++++++++++|++++
T Consensus 381 ~~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 381 NESNIDYVAEAIAAVL 396 (396)
T ss_pred CHHHHHHHHHHHHhhC
Confidence 9999999999998763
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.5e-46 Score=360.54 Aligned_cols=338 Identities=17% Similarity=0.208 Sum_probs=277.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
..+++|+.|.|. .+.++.+.+++.+.... ...|++..|.++||+++++|++...+ .+++|++|+|+++++.
T Consensus 85 ~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al~ 155 (431)
T PRK15481 85 TPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAIE 155 (431)
T ss_pred chhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHHH
Confidence 356888888765 34455677777775543 35799999999999999999876332 3569999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe-CCCCCcccccCHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~-~p~nptG~~~~~~ 202 (421)
.+++++++|||.|++++|+|..+...++..|++++.++++. + ++|+|++++.+++++++++++ +||||||.++|.+
T Consensus 156 ~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~-~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~ 232 (431)
T PRK15481 156 RLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDA-E--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSAR 232 (431)
T ss_pred HHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCC-C--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHH
Confidence 99999999999999999999999999999999999998753 2 489999999887788888876 9999999999999
Q ss_pred HHHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|+++|+++ |++||+||+|.++.+.+. .+.... ..+++++++||||.|+ +|+|+||++++ +++.
T Consensus 233 ~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~--~~~~~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~--------~~~~ 300 (431)
T PRK15481 233 RAAALRNLLARYPQVLVIIDDHFALLSSSPY--HSVIPQ-TTQRWALIRSVSKALG-PDLRLAFVASD--------SATS 300 (431)
T ss_pred HHHHHHHHHHhcCCceEEecCchhhhccCCC--CCCCcC-CCCCEEEEeeeccccC-CCceeEEEeCC--------HHHH
Confidence 999999999999 999999999999875432 121122 2358999999999998 99999999985 3566
Q ss_pred HHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
+.+..... ...+.+.++|.++..+|+... ..++++.++.++++++.+.+.|++. ++. +..|++|+|+|++++.
T Consensus 301 ~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~--- 375 (431)
T PRK15481 301 ARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT--- 375 (431)
T ss_pred HHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC---
Confidence 76655433 234578899999999998643 4678889999999999999999987 776 4479999999999973
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec-CCHHHHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA-IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~-~~~e~l~~~~~~l~~~~~ 415 (421)
+..+++..+ .++||.+.||..|+. .+++|+|++ .+++++++++++|++++.
T Consensus 376 ----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 ----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred ----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 355666665 578999999998854 368999999 678999999999999864
No 62
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.6e-46 Score=358.66 Aligned_cols=372 Identities=16% Similarity=0.175 Sum_probs=278.9
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
+...+.+.++.+...+++.. +++++||+.|.|. ..+.....+.+.+++.+.........|++..|.+++|+++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~ 83 (404)
T PTZ00376 8 VPLGPPDPILGLAAAFKADP----SPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQK 83 (404)
T ss_pred CCcCCCChHHHHHHHHhhcC----CcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHH
Confidence 33445566777777665322 4688999999863 211112233444444433332344689999999999999999
Q ss_pred HHhhhCCCCCCCCcEE--EcCCHHHHHHHHHH---HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631 98 YLNSELPCKLSPDDVY--LTAGCKQAIQVILT---VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~--~~~g~~~al~~~~~---~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 172 (421)
|+....+..+++++|+ .|.|+++++.+++. .+++|||+|++++|+|+.|...++..|++++.+++.+++++++|+
T Consensus 84 ~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~ 163 (404)
T PTZ00376 84 LLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDF 163 (404)
T ss_pred HhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCH
Confidence 9976555557888998 48999999988875 567999999999999999999999999999999985555688999
Q ss_pred HHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--CcccccccC-CCCCE
Q 014631 173 DGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFG-STVPV 246 (421)
Q Consensus 173 e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~ 246 (421)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ..+++
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~v 243 (404)
T PTZ00376 164 DGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEF 243 (404)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcE
Confidence 99999874 3456777899999999999999999999999999999999999999887541 122222222 23479
Q ss_pred EEEcccccccCCCCceEEEEEee-CCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--h---hHHHHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVTS-DPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--E---DFFSKIVD 319 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~---~~~~~~~~ 319 (421)
++++||||.|+++|+|+||+++. .+.... ..+.+.+.... ....+++.+.|.++..+++... + ....+.++
T Consensus 244 i~i~SfSK~~~~~GlRvG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~ 321 (404)
T PTZ00376 244 LVAQSFSKNMGLYGERIGALHIVCANKEEA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSG 321 (404)
T ss_pred EEEEeCCCcccccccccceEEEEeCCHHHH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 99999999999999999998531 111000 12333443322 2334567789999999997522 2 23455667
Q ss_pred HHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631 320 ILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~ 396 (421)
+++++++.+.+.|+++. ++. ...|.+|+|+|+.++ .+++.+|++++||.+.||. ||++
T Consensus 322 ~~~~~r~~l~~~L~~~~~~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~--------Ris~ 382 (404)
T PTZ00376 322 RIQNMRQLLYDELKALGSPGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG--------RISV 382 (404)
T ss_pred HHHHHHHHHHHHHHhcCCCCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC--------eEEE
Confidence 89999999999999862 244 347899999998773 4678888888899999971 9999
Q ss_pred c-CCHHHHHHHHHHHHHHHH
Q 014631 397 A-IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 397 ~-~~~e~l~~~~~~l~~~~~ 415 (421)
+ .+.+++++++++|++++.
T Consensus 383 ~~~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 383 AGLTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred eccCHHhHHHHHHHHHHHHh
Confidence 7 899999999999999875
No 63
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=4.8e-47 Score=358.94 Aligned_cols=349 Identities=30% Similarity=0.551 Sum_probs=294.3
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI 122 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al 122 (421)
.+|||+.|++......+.++.+.+++.+ .........|++..|.+++|+++++|+++..|...+++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 5899999997743233355556666655 33444567999999999999999999997778788898 999999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCc
Q 014631 123 QVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPC 195 (421)
Q Consensus 123 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~npt 195 (421)
..+...+ .++||+|++++|+|+.+...++..|.+++.+++..++++.+|++++++.+++ +++++++++|+|||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999987778889999999998876 56889999999999
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI 274 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 274 (421)
|..+|.+++++|+++|++||+++|+||+|.++.++...+.+ ....+...+++++.|+||.|+++|+|+||++++
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~----- 236 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAP----- 236 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEE-----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccch-----
Confidence 99999999999999999999999999999999887554433 344555566999999999999999999999995
Q ss_pred hhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631 275 LQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 352 (421)
+++.+.+......... +.+.+.++..++.... ..++++.+++++++++.+.+.|++. ++. +..+.+++|.|+
T Consensus 237 ---~~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~ 310 (363)
T PF00155_consen 237 ---PELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV 310 (363)
T ss_dssp ---HHHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred ---hhhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence 4677877777654333 7788888888877533 2388999999999999999999988 888 446778999999
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHH
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-AIEPSALEEGLGRI 410 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l 410 (421)
.++.. ++.++..+|+++.||.+.||..|+.++++|+++ +.+++++++++++|
T Consensus 311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 88753 357888888777799999999999899999999 58999999999986
No 64
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-45 Score=346.79 Aligned_cols=349 Identities=19% Similarity=0.326 Sum_probs=286.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|+|+.|.+. +++++.+.+++.+.+.......|++..|++++|+++++++ ++++++|++|+|+++++
T Consensus 27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al 96 (380)
T PRK06225 27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL 96 (380)
T ss_pred cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence 5689999998755 5788999999999987655567988889999999999998 46788999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC-CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++++++.++++++++++++|+||||.++|.
T Consensus 97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 999999999999999999999998888899999999998743 3467899999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+++|+++|+++|+||+|.++..+. . ....++ .++++++.||||.|+++|+|+||++++ ++++
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~-~--~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~--------~~l~ 244 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH-T--LAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVAT--------PDLI 244 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEehhHHHHhccC-C--chhhcC-CCCEEEEeechhhcCCccceeEEEecC--------HHHH
Confidence 999999999999999999999998865321 1 222222 357899999999999999999999985 3566
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+........+.+.+.|.++..++.. ...+.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--- 320 (380)
T PRK06225 245 EVVKSIVINDLGTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG--- 320 (380)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc---
Confidence 666655433446778888888888864 3466777777888888889999998777542335667888999886421
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+..++...+ .++||.+.||..|+. .+++|++++.++|++++++++|++++++++.
T Consensus 321 -~~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 321 -IDPEDLVEYL-LERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred -CCHHHHHHHH-HHCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 1466777766 478999999976643 4689999998899999999999999998875
No 65
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=4.1e-45 Score=344.92 Aligned_cols=330 Identities=21% Similarity=0.343 Sum_probs=269.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK-LSPDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~~i~~~~g~~~a 121 (421)
+.++++|+.|.|. .+.++.+.+++.+.... ..|++..|.+++|+++++|+.+.+|+. +++++|++|+|++++
T Consensus 26 ~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~ 98 (364)
T PRK07865 26 PDGIVDLSVGTPV----DPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKEL 98 (364)
T ss_pred CCCEEEcCCCCCC----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHH
Confidence 5679999999865 35578888888776532 479988999999999999999988886 899999999999999
Q ss_pred HHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
+..++..+ +++||.|++++|+|..+...++..|++++.++ ++++++. ++++++++++||||||.+++
T Consensus 99 i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~~---~~~~~v~~~~p~NPtG~~~~ 166 (364)
T PRK07865 99 VAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELGP---QRPALIWLNSPSNPTGRVLG 166 (364)
T ss_pred HHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCCc---ccceEEEEcCCCCCCCccCC
Confidence 99988888 79999999999999999999999999887763 2233322 56789999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc---CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF---GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
.+++++|+++|+++|++||+||+|.++.+++.....+... ...+++++++||||.|+++|+|+||++++
T Consensus 167 ~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~-------- 238 (364)
T PRK07865 167 VDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGD-------- 238 (364)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecC--------
Confidence 9999999999999999999999999988765322222110 12357999999999999999999999885
Q ss_pred HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++++.+..... ...+.+.+.|.++..++.. ..+.++.++.++++++.+.+.|++. |+. +..|++|+|+|+.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~ 314 (364)
T PRK07865 239 PALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFR-VDHSEAGLYLWATRGE 314 (364)
T ss_pred HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCccEEEEEeCCC
Confidence 356777765542 2346778899998888864 5677888889999999999999987 777 5578889999998742
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
+..++.. .+.++||.+.||..|+. .+++||+++.+++++++++++|+
T Consensus 315 -------~~~~~~~-~l~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 315 -------DCWDTVA-WLAERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred -------CHHHHHH-HHHHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 3445554 45778999999998864 57999999878999999999875
No 66
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=2.4e-45 Score=351.26 Aligned_cols=377 Identities=20% Similarity=0.295 Sum_probs=280.3
Q ss_pred HHHHHHHHHHhccccCC-------CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH-HH
Q 014631 27 VRSALTIIKQNLKENDP-------RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA-DY 98 (421)
Q Consensus 27 ~~~~~~~~~~~~~~~~~-------~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia-~~ 98 (421)
..++..+|...+.++.+ .++|+|+.|.|. +++++.+ +++.+.+.. .+|+++.|..+++++++ +|
T Consensus 70 ~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~---~~Y~~p~g~~~~~e~iv~~y 141 (521)
T TIGR03801 70 KEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIG---DNYPVPDRMLPHSEKIVHQY 141 (521)
T ss_pred cchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhc---CCCCCCCCCHHHHHHHHHHH
Confidence 45677777777766543 257999999977 4555444 556555533 26876777777777776 57
Q ss_pred HhhhCCCCCCC-C--cEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCC-
Q 014631 99 LNSELPCKLSP-D--DVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKG- 167 (421)
Q Consensus 99 l~~~~~~~~~~-~--~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~- 167 (421)
+.+.++....+ + +|++|+|+++++..++.+ +++|||+|++++|+|+.|...+... |.+++.++.+.+++
T Consensus 142 ~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~ 221 (521)
T TIGR03801 142 LIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTED 221 (521)
T ss_pred HHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeeccccccc
Confidence 77665433333 3 899999999999999887 6899999999999999999887776 56666666654433
Q ss_pred ----ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccC
Q 014631 168 ----WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 168 ----~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
|.+|+++++++++++++++++++|+||||.+++.+++++|+++|++| |++||+||+|..+.+. +.++...
T Consensus 222 g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~sl~~~- 297 (521)
T TIGR03801 222 GTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FRSLFAE- 297 (521)
T ss_pred ccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---ccchhhh-
Confidence 88999999998888999999999999999999999999999999986 9999999999987742 2233232
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH------HHHHHHH------------------------hhhc-cc
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE------LRIVDSI------------------------KGYL-NI 290 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------~~~~~~~------------------------~~~~-~~ 290 (421)
..++++++.||||.|+++|+|+||+++++. .+++. ++..+.+ .... ..
T Consensus 298 ~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~-~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~ 376 (521)
T TIGR03801 298 LPYNTIGVYSFSKYFGATGWRLGTIALHKD-NIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNH 376 (521)
T ss_pred CCCCEEEEEcchhhccCchhhhhhhhcCch-HHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhc
Confidence 235799999999999999999999998642 11100 0011111 1111 22
Q ss_pred ccCCchHHHH--H---HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc------
Q 014631 291 SSGPATFVQG--A---VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL------ 359 (421)
Q Consensus 291 ~~~~~~~~~~--~---~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~------ 359 (421)
+.+.+.+.|. + +.++++ ..+.+.++.++.++++++.+.+.| .+ .+. ...|.+++|+|++++....
T Consensus 377 ~~g~s~p~Q~q~al~a~~all~-~~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~~~~~~~ 452 (521)
T TIGR03801 377 TAGLSTPQQVQMALFSLFALMD-KENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAEKNYGEE 452 (521)
T ss_pred cCCCCcHHHHHHHHHHHHHHhc-cchhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHHHhcchH
Confidence 3455666665 3 344454 345788889999999999999888 22 222 2368889999999874211
Q ss_pred -----cCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 360 -----EGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 360 -----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
....++.+++.+|+++.||.+.||..|+. .+++|||++ .+++++.+++++|+++++++.++
T Consensus 453 f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 453 FSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred HHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 00125788999999999999999999986 457999999 68899999999999999887653
No 67
>PLN02368 alanine transaminase
Probab=100.00 E-value=4.8e-46 Score=351.75 Aligned_cols=331 Identities=22% Similarity=0.378 Sum_probs=260.8
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCC----CCC----------------------CCcHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAF----PCF----------------------RTTPVAADAVV 71 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~----~~~----------------------~~~~~v~~a~~ 71 (421)
++.+++.+.++.+..+.++. +..+.++|+|++|+|... ..+ .+++.+.+++.
T Consensus 14 ~~~~~~~~~~~~~~~~a~~~--~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~~a~~ 91 (407)
T PLN02368 14 NVKKCQYAVRGELYLRASEL--QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIARAKH 91 (407)
T ss_pred HHHhhhhhcCCHHHHHHHHH--HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHHHHHH
Confidence 44555555555544443332 224789999999998521 001 24556666654
Q ss_pred HHHh-cCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHH
Q 014631 72 DAVR-SAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEAN 149 (421)
Q Consensus 72 ~~~~-~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~ 149 (421)
.... ......|++..|.++||+++++|+++++|..+++++|++|+|+++++..++.+++ ++||.|++++|+|+.|...
T Consensus 92 ~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~~~ 171 (407)
T PLN02368 92 YLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYSAT 171 (407)
T ss_pred HHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHHHH
Confidence 4322 2235689999999999999999999988888999999999999999999999987 7999999999999999999
Q ss_pred HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 150 ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 150 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
+...|++++.++++.+++|++|++++++.+++ +++++++++||||||.+++.+++++|+++|++||++||+||+
T Consensus 172 ~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~ 251 (407)
T PLN02368 172 ISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEV 251 (407)
T ss_pred HHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcc
Confidence 99999999999987777899999999998763 678899999999999999999999999999999999999999
Q ss_pred ccccccCCC-Ccccccc----cC----CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccC
Q 014631 224 YDHLTFGST-PYVRMGV----FG----STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG 293 (421)
Q Consensus 224 ~~~~~~~~~-~~~~~~~----~~----~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (421)
|.++.|++. .+.++.. ++ ..+++|+++||||.| +++|+|+||+++.+.. +++++.+........+
T Consensus 252 Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~-----~~li~~~~~~~~~~~~ 326 (407)
T PLN02368 252 YQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP-----PKTVEEIYKVASIALS 326 (407)
T ss_pred ccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC-----HHHHHHHHHHhcccCC
Confidence 999998764 3333222 22 234799999999998 7999999999952111 3567777665433456
Q ss_pred CchHHHHHHHHHhhccc------hhHH---HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 294 PATFVQGAVPQIFKNTK------EDFF---SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 294 ~~~~~~~~~~~~l~~~~------~~~~---~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
++.++|.++.++++... ..+. ++..+.++++++.+.+.|+++||+.+ ..|+|++|+|++++.
T Consensus 327 ~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~-~~P~Gafy~~~~i~l 397 (407)
T PLN02368 327 PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC-NFTEGAMYSFPQIKL 397 (407)
T ss_pred CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe-CCCCeeeEeccCCCC
Confidence 88899999999996421 1223 44678999999999999999999984 489999999987764
No 68
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.1e-44 Score=338.80 Aligned_cols=345 Identities=21% Similarity=0.306 Sum_probs=276.1
Q ss_pred hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCC
Q 014631 25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELP 104 (421)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~ 104 (421)
.+++.+++...+.. + .+..+++|+.|+|. ++.++.+.+++.+... ...|++..|.++||+++++|+++++|
T Consensus 4 ~~~~~~~~~~~~~~-~-~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~ 74 (357)
T TIGR03539 4 FPWDSLAPYKAKAA-S-HPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRG 74 (357)
T ss_pred chHHHHHHHHHHhh-h-CCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcC
Confidence 44556665555432 2 36789999999875 4667888888877653 25799999999999999999999888
Q ss_pred CC-CCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631 105 CK-LSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN 182 (421)
Q Consensus 105 ~~-~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~ 182 (421)
+. +++++|++|+|+++++..++..+ .++||.|++++|+|.++...++..|++++.++ +++.+. .++
T Consensus 75 ~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~ 142 (357)
T TIGR03539 75 VPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVG 142 (357)
T ss_pred CCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccC
Confidence 86 99999999999999999998887 79999999999999999988899998877653 223322 246
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--c-CCCCCEEEEcccccccCCC
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--F-GSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~-~~~~~~i~~~s~sK~~~~~ 259 (421)
++++++++|+||||.+++.+++++|.++|++||+++|+||+|.++.+++.....+.. . ...+++++++||||.|+++
T Consensus 143 ~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~ 222 (357)
T TIGR03539 143 PDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLA 222 (357)
T ss_pred ccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCC
Confidence 889999999999999999999999999999999999999999988876542222211 0 1235789999999999999
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
|+|+||++++ +++++.+..... ...+++.+.|.++..+|+. ..+..+.++.++++++.+.+.|.+. |+
T Consensus 223 G~R~G~~i~~--------~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~ 291 (357)
T TIGR03539 223 GYRAGFVAGD--------PALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GF 291 (357)
T ss_pred ceeEEEEecC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 9999999975 356666655543 2346788899998888864 4667778889999999999999986 77
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l 410 (421)
. +..|.+|+|+|++++. +..++... +.++||.+.||..|+. ++++|+|++.+++++++++++|
T Consensus 292 ~-~~~p~~~~~~~~~~~~-------~~~~~~~~-l~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 292 R-IDHSEAGLYLWATRGE-------DAWDTVDR-LAELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred C-CcCCCccEEEEEECCC-------CHHHHHHH-HHhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 7 5578899999998752 34556654 5788999999998764 4799999998889999999876
No 69
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.2e-45 Score=344.00 Aligned_cols=330 Identities=20% Similarity=0.300 Sum_probs=272.1
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|+|+.|.+. +++++.+++++.+.+... ..| |..|.++||+++++|+ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~nen~----~~~~~~v~~a~~~~~~~~--~~Y-p~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i 94 (366)
T PRK01533 28 DHSFVKLASNENP----FGCSPRVLDELQKSWLDH--ALY-PDGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI 94 (366)
T ss_pred CCceEEeCCCCCC----CCCCHHHHHHHHHHHHhc--CcC-CCCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 5689999999865 688899999998876552 346 5678899999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++.+++++||+|++++|+|..|...+...|.+++.++.+ ++++|++++++.++++++++++++||||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~ 171 (366)
T PRK01533 95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171 (366)
T ss_pred HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999874 346899999998888899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++|++++ ++|+||+|.++.+.+.....+..++..+++|+++||||.|+++|+|+||++++ +++++
T Consensus 172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~--------~~~~~ 242 (366)
T PRK01533 172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGH--------EELIE 242 (366)
T ss_pred HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCC--------HHHHH
Confidence 9999999998876 56779999988765432222333445568999999999999999999999985 45777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+..... ..+.+.++|.++..+|+. ..+.++.++..+++++.+.+.++.+ |+. + .+..++|+|+.++
T Consensus 243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~------- 309 (366)
T PRK01533 243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE------- 309 (366)
T ss_pred HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence 7776653 357889999999999964 5777888888888888888888877 777 4 3446779999885
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+...+...+ .++||.|++ | ++++||+++.. ++.++++++|+++++..+
T Consensus 310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~~ 357 (366)
T PRK01533 310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENKK 357 (366)
T ss_pred -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhcc
Confidence 245566555 578999997 3 57899998754 677899999988876543
No 70
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-44 Score=340.94 Aligned_cols=328 Identities=20% Similarity=0.356 Sum_probs=271.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.|.+. +++++.+.+++.+.+.. ...|+ ..|.++||+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~-~~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al 95 (357)
T PRK14809 29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYP-KASHADLTAALADRW------DVSPEQVWLANGGDGAL 95 (357)
T ss_pred ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 5689999999865 56778888999887764 45786 467899999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.+++++++++||.|++++|+|..+...+...|.+++.++++.++++.++.+++++.. ++++++++++||||||.++|.+
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHH
Confidence 999999999999999999999988888888999999999866667788888887765 3578999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++|++ +++||+||+|.++.+.+. .+...+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~--------~~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVP--------EEWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecC--------HHHHH
Confidence 99999999975 789999999999875432 2223344568999999999999999999999986 35777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+..... ..+.+.++|.++..++.. ..++++.++.++++++.+.+.|... . .|.+|+|+|++++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~------- 306 (357)
T PRK14809 243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG------- 306 (357)
T ss_pred HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence 7766543 346778888888888864 5778888889999999999988653 1 2567889998874
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+..+++.. ++++||.+.||..|+.++++|++++. .+++++++++|+++++
T Consensus 307 -~~~~~~~~-l~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -DASAVAEA-AQERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -CHHHHHHH-HHHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 35667766 47789999999999878899999874 6899999999998764
No 71
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=1.3e-44 Score=366.37 Aligned_cols=356 Identities=15% Similarity=0.271 Sum_probs=285.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~ 119 (421)
.++.++|+|+.|++. +++|+.+++++.+.+.+. .+ ..|++++++++++|+++++|+..++ ++|++++|++
T Consensus 694 ~~g~~vI~LsinE~d----~ppPp~V~eAi~eal~~~---~~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~ 764 (1082)
T PLN02672 694 SQESSLIHMDVDESF----LPVPSAVKASIFESFVRQ---NI--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSL 764 (1082)
T ss_pred cCCCCEEEEeCCCCC----CCCCHHHHHHHHHHHhhc---CC--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHH
Confidence 347799999999966 688999999999887553 22 3456789999999999999988765 5899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCC-CCccc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPG-NPCGN 197 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~-nptG~ 197 (421)
+++..++.++++|||.|+++.|+|+.|...++..|++++.++++.+++|.+|++++++++++ +.+.+++++|+ ||||.
T Consensus 765 elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~ 844 (1082)
T PLN02672 765 ALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGL 844 (1082)
T ss_pred HHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCc
Confidence 99999999999999999999999999999999999999999987667899999999998865 35678999997 99999
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc--cccc----ccCC---CCCEEEEcccccccCCCCceEEEEEe
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY--VRMG----VFGS---TVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
+++.+++++|+++|++||++||+||+|+++.|++... .++. .++. ..++++++||||.|+++|+|+||+++
T Consensus 845 v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylIa 924 (1082)
T PLN02672 845 LYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLAL 924 (1082)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEEe
Confidence 9999999999999999999999999999988876431 1111 1221 23789999999999999999999998
Q ss_pred eCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHh---hccc---hhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF---KNTK---EDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
++ +++++.+...... ..+....+.++..++ .... ..++.+.++.++++++++.+.|++. |+. +.
T Consensus 925 p~-------~eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v~ 994 (1082)
T PLN02672 925 ND-------SVLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-VL 994 (1082)
T ss_pred CC-------HHHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-Ee
Confidence 64 2366777654322 233334444444433 2111 3456777888999999999999987 887 55
Q ss_pred CCCceeEEEEecCccc-------ccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHH
Q 014631 343 KPEGSMFVMVKLNLSL-------LEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 343 ~~~~~~~~~~~~~~~~-------~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l 410 (421)
.|++|+|+|+.++... .+. ..++.++..+++++.||.+.||..|+.++++||+++.+++++++++++|
T Consensus 995 ~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALerL 1074 (1082)
T PLN02672 995 EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKAI 1074 (1082)
T ss_pred cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHHH
Confidence 8999999999764210 000 1246788888888889999999988888999999999999999999999
Q ss_pred HHHHH
Q 014631 411 KAFCQ 415 (421)
Q Consensus 411 ~~~~~ 415 (421)
+++.+
T Consensus 1075 ~kf~~ 1079 (1082)
T PLN02672 1075 ARFKE 1079 (1082)
T ss_pred HHHHH
Confidence 98754
No 72
>PLN02397 aspartate transaminase
Probab=100.00 E-value=1.3e-44 Score=346.11 Aligned_cols=371 Identities=16% Similarity=0.189 Sum_probs=270.5
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCC-CCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGD-PSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
+++..+.++|+.+...++.+. +...++|+.|. |+..+....-+.+.++..+.+.......|++..|.++||++++
T Consensus 26 ~~~~~~~~~i~~~~~~~~~~~----~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia 101 (423)
T PLN02397 26 HVEPAPPDPILGVTEAFLADP----SPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSA 101 (423)
T ss_pred cCCcCCCChHHHHHHHHhhCC----CcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHH
Confidence 344556677888777766433 66789999996 4521111123456666544444344457999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEE--cCCHHHH--HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631 97 DYLNSELPCKLSPDDVYL--TAGCKQA--IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~--~~g~~~a--l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 172 (421)
+|+....+....+++|.. +.+++++ +...+..++.|||+|++++|+|+.|...++..|++++.++..+++++++|+
T Consensus 102 ~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~ 181 (423)
T PLN02397 102 KLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDF 181 (423)
T ss_pred HHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCH
Confidence 999654432333334311 2233233 333333445699999999999999999999999999999874444578999
Q ss_pred HHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--CcccccccC-CCCCE
Q 014631 173 DGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVFG-STVPV 246 (421)
Q Consensus 173 e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~ 246 (421)
+.+++.+. ++++++++++||||||.+++.+++++|+++|++||++||+||+|.++.+++. ...++..+. ..+++
T Consensus 182 ~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~v 261 (423)
T PLN02397 182 DGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEI 261 (423)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcE
Confidence 98887664 4567788899999999999999999999999999999999999999988541 222332232 23469
Q ss_pred EEEcccccccCCCCceEEEEE--eeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc--hhH---HHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLV--TSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK--EDF---FSKIV 318 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~---~~~~~ 318 (421)
|+++||||.|+++|+|+||++ ++.++ .. ..+.+.+..... ...+++.+.|.++..+|+... ..+ +++.+
T Consensus 262 I~~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~ 338 (423)
T PLN02397 262 LVAQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMA 338 (423)
T ss_pred EEEEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999986 32211 00 123333433332 234677788988888887521 123 67778
Q ss_pred HHHHHHHHHHHHHhhcCCC----ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 319 DILRDTADICYDRIKEIPC----ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
++++++++.+.+.|+++ + +. ...|++|+|+|+.++ .+++.+|++++||.+.++ + |+
T Consensus 339 ~~~~~rr~~l~~~L~~~-~~~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri 398 (423)
T PLN02397 339 DRIISMRQKLYDALEAR-GSPGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RI 398 (423)
T ss_pred HHHHHHHHHHHHHHHhc-CCCCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eE
Confidence 89999999999999987 5 66 347999999998773 358889999999999743 1 99
Q ss_pred Eec-CCHHHHHHHHHHHHHHHH
Q 014631 395 TFA-IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 395 ~~~-~~~e~l~~~~~~l~~~~~ 415 (421)
+++ .+.+++++++++|++++.
T Consensus 399 ~~~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 399 SMAGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred EEeeCCHHHHHHHHHHHHHHHh
Confidence 997 899999999999999975
No 73
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.9e-45 Score=343.54 Aligned_cols=331 Identities=21% Similarity=0.295 Sum_probs=275.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++++|+.|.+. +++++.+.+++.+.+.. ..|.+..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~---~~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE---LALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH---hhcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 4488999999866 45678899999888764 24556678999999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++++++++||+|++++|+|+.+...+...|.++..++.+ ++++|++++++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999999999999999999875 356899999998888889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++.++++.|+ +|+++|+||+|.++.+.+.....+...+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIAS--------EELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCC--------HHHHH
Confidence 9999998874 69999999999998765543323333344568999999999999999999999985 35777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... .+++.++|.++..+++. ..+.++.++.++++++.+.+.|.+. ++. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------ 310 (359)
T PRK03158 243 KLNIARPP-FNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------ 310 (359)
T ss_pred HHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence 77666543 46788999999999964 4677788888889999999999887 776 4 45667899988752
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++.+++..++ ++||.+.||..|+.++++||+++ +.++.++++++|+++
T Consensus 311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 3567777764 67999999999987889999988 567889999988775
No 74
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.5e-44 Score=337.44 Aligned_cols=334 Identities=19% Similarity=0.333 Sum_probs=271.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++++|+.|.+. .++|+.+.+++.+.+.. ...|++ .+.++||+++++|+ ++++++|++|+|+++++
T Consensus 18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 84 (354)
T PRK06358 18 KNMILDFSANINP----LGVPESLKQAITENLDK--LVEYPD-PDYLELRKRIASFE------QLDLENVILGNGATELI 84 (354)
T ss_pred ccceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCC-ccHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 3458999998755 35578899999887754 457865 46889999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..+++++ .+ +.|++++|+|+.|...++..|++++.++.+.++++.+| +++++.+.++++++++++||||||.+++.+
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~ 161 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKE 161 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHH
Confidence 9999887 44 68999999999999999999999999998766678889 666666666789999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++|++||+++|+||+|.++.+++.....+..++..+++++++||||.|+++|+|+||+++++ +.+.+
T Consensus 162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~-------~~~~~ 234 (354)
T PRK06358 162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSN-------KNLAE 234 (354)
T ss_pred HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999998776543334445556789999999999999999999999853 34666
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+..... ..+.+.++|.++..+++. ..++++.++.++++++.+.+.|++++++. +..|. |.|+|++++.
T Consensus 235 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~~------ 303 (354)
T PRK06358 235 KLLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLEK------ 303 (354)
T ss_pred HHHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcCc------
Confidence 6666554 346788899999888863 45678888999999999999999887876 44565 5589988862
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
..+++..++ ++||.+.||..|+. ++++|++++.+ ++.+++++.|++++
T Consensus 304 --~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 304 --PIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred --hHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 456777665 57999999999853 47899998754 55577777777654
No 75
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-44 Score=339.97 Aligned_cols=336 Identities=19% Similarity=0.313 Sum_probs=269.8
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhC--CCCCCCCcEEEcCCHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSEL--PCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~--~~~~~~~~i~~~~g~~~a 121 (421)
.+++|+.|.|. +++++.+.+++.+.+.... ...|+ ..|.++||+++++|+++.+ |+.+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEFP----YDLPPDLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 58999999866 6788999999998877642 34685 4799999999999998876 566889999999999999
Q ss_pred HHHHHHHhcCCCC-eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcc
Q 014631 122 IQVILTVLARPGA-NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCG 196 (421)
Q Consensus 122 l~~~~~~l~~~gd-~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG 196 (421)
+..++.+++.+|| +|++++|+|..+...++..|++++.++.+ ++++++|++++++.+. ++++++++++||||||
T Consensus 104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~-~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRD-PETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCC-cccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 9988877777886 89999999999999999999999999874 3457899999998875 4789999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 276 (421)
.+++.++++++.++| +|++||+||+|.++.+. . .+..+...+++|+++||||.||++|+|+||++++
T Consensus 183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~------- 249 (374)
T PRK02610 183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGH------- 249 (374)
T ss_pred CCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecC-------
Confidence 999999999999987 49999999999987532 1 1223333457899999999999999999999985
Q ss_pred HHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 277 ELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++++.+...... .+.+.+.|.++..+++. .+.+.+..++.++ .++.+.+.|++++++. + .|++|+|+|++++.
T Consensus 250 -~~l~~~l~~~~~~-~~~~~~~q~a~~~~l~~-~~~~~~~~~~~~~-~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~ 323 (374)
T PRK02610 250 -PELIAVLEKVRLP-YNLPSFSQLAAQLALEH-RQELLAAIPEILQ-ERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ 323 (374)
T ss_pred -HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC-HHHHHHHHHHHHH-HHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence 3577777666533 35678899998888864 3445555554444 4777888898887776 4 58889999999874
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
. .++.+++.. +.++||.+.++ .+++|++++.+ +++++++++|+++++++
T Consensus 324 ~-----~~~~~~~~~-l~~~gi~v~~~-----~~~lRls~~~~-~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 324 D-----AALAALHQA-LKAQGTLVRHT-----GGGLRITIGTP-EENQRTLERLQAALTQL 372 (374)
T ss_pred C-----CCHHHHHHH-HHHCCEEEEeC-----CCeEEEeCCCH-HHHHHHHHHHHHHHhhc
Confidence 2 145666665 47789999864 46899999864 56899999999988764
No 76
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.1e-44 Score=342.99 Aligned_cols=357 Identities=22% Similarity=0.305 Sum_probs=272.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..++|+|+.|.|... .++.+.+.+++.+.+... ....|++..|.++||+++++|+++.+|+++++++|++|+|+
T Consensus 29 ~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga 106 (416)
T PRK09440 29 TPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGS 106 (416)
T ss_pred CCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCh
Confidence 467899999998731 123356677777766542 23579999999999999999999989999999999999999
Q ss_pred HHHHHHHHHHhcC-----CCCeEEE-cCCCCcchHHHHhhcC----ceeEeeeccCCC-CccCCHHHHHhhhccCceEEE
Q 014631 119 KQAIQVILTVLAR-----PGANILL-PKPGFPLYEANARHTR----LEIRHFDLLPEK-GWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 119 ~~al~~~~~~l~~-----~gd~Vl~-~~p~y~~~~~~~~~~g----~~~~~~~~~~~~-~~~~d~e~l~~~~~~~~~~i~ 187 (421)
++++.+++.++++ +||.|++ .+|+|+.|...+...+ .....+++..++ ++++|+++++ +.+++++++
T Consensus 107 ~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~ 184 (416)
T PRK09440 107 QSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAIC 184 (416)
T ss_pred HHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCCCceEEE
Confidence 9999999999984 6899999 7999999987665433 222333332221 4678999987 355778999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+++||||||.+++.+++++|+++|++||++||+||+|..+.... ....... ...+++|+++||||. +++|+|+||++
T Consensus 185 l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~~SfSK~-~~pGlRiG~~i 261 (416)
T PRK09440 185 VSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILCMSLSKL-GLPGVRCGIVI 261 (416)
T ss_pred EecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEEeccccc-CCCcceEEEEe
Confidence 99999999999999999999999999999999999997642110 0111111 114689999999997 99999999999
Q ss_pred eeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccc-hhHHHH-HHHHHHHHHHHHHHHhhcC-CC--cccc
Q 014631 268 TSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTK-EDFFSK-IVDILRDTADICYDRIKEI-PC--ITCP 341 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~~-~g--~~~~ 341 (421)
++ +++++.+...... ..+++.+.|.++..+++... ..+..+ .++.++++++.+.+.|.+. ++ +. +
T Consensus 262 ~~--------~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~l~~~~~~-~ 332 (416)
T PRK09440 262 AD--------EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRYLPDEPCL-I 332 (416)
T ss_pred CC--------HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCeE-E
Confidence 85 3577777766543 34678899999999997633 233333 5677888888888888753 33 34 3
Q ss_pred CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---------CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---------KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
..|.+|+|+|++++... .++.++... +.++||.+.||..|+. .+++|||++.+++++++++++|.+
T Consensus 333 ~~p~gg~fiw~~~~~~~----~~~~~~~~~-l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~~~~~~~l~~~i~~l~~ 407 (416)
T PRK09440 333 HKPEGAIFLWLWFKDLP----ITTEELYQR-LKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNYVQDDEEIEKGIAILAE 407 (416)
T ss_pred ecCCCceEEEEECCCCC----CCHHHHHHH-HHHCCEEEechHhhCCCCccccCCcCceEEEEecCCHHHHHHHHHHHHH
Confidence 47889999999997421 145666665 4778999999998843 248999998789999999999999
Q ss_pred HHHHhhhc
Q 014631 413 FCQRHAKQ 420 (421)
Q Consensus 413 ~~~~~~~~ 420 (421)
++++..++
T Consensus 408 ~~~~~~~~ 415 (416)
T PRK09440 408 EVEKAYAE 415 (416)
T ss_pred HHHHHhhc
Confidence 99887653
No 77
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=2.1e-43 Score=331.87 Aligned_cols=334 Identities=19% Similarity=0.327 Sum_probs=267.3
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.|.+. +++|+.+++++.+.+.. ...|++ .++.++|+++++++ ++++++|++|+|+++++
T Consensus 19 ~~~~i~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 85 (356)
T PRK08056 19 PDQLLDFSANINP----LGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETESI 85 (356)
T ss_pred hhhEEEeccccCC----CCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 5678999999855 57889999999887764 346765 46899999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..+++++ .+|+ +++.+|+|..|...++..|.+++.++.++++++.+| +++++.+.++++++++++||||||..++.+
T Consensus 86 ~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~ 162 (356)
T PRK08056 86 FAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPERQ 162 (356)
T ss_pred HHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCHH
Confidence 9999887 6775 777899999999999999999999998766677776 455565667889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++|+++|++||+||+|.++.+.+....+. +...+++++++||||.|+++|+|+||+++++ +++++
T Consensus 163 ~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~-------~~~~~ 233 (356)
T PRK08056 163 LLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSD-------DAAVA 233 (356)
T ss_pred HHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCC-------HHHHH
Confidence 99999999999999999999999987655322222 2234578999999999999999999999853 24556
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+..... ..+++.+.|.++..+++. ..+..+.++.++++++.+.+.|++++++. + .|.+++|+|++++.
T Consensus 234 ~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~------ 302 (356)
T PRK08056 234 RMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER------ 302 (356)
T ss_pred HHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC------
Confidence 6655433 245677888888888853 56677888899999999999999887876 4 35568899998863
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+..+++..++ ++||.+.+|..|.. .+++||+++. .++.+.+++.|+++++
T Consensus 303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 -PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT 354 (356)
T ss_pred -ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence 3456777665 68999999998843 4699999984 4666777777777653
No 78
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-43 Score=333.17 Aligned_cols=333 Identities=22% Similarity=0.331 Sum_probs=267.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+..+++|+.|.+. +.+++.+.+++.+.... ...|++..| .++|+++++++ ++++++|++|+|+++++
T Consensus 35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 101 (371)
T PRK05166 35 VPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI 101 (371)
T ss_pred CcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 5689999999865 35678888888876543 457988888 59999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++.+++++||.|+++.|+|..+...++..|.+++.++.+. ++++|++++++.++++++++++++|+||||.+++.+
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999998753 457899999998888889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|+++|++ ++++|+||+|.++.+++.....+..+. ..+++|+++||||.|+++|+|+||+++++ +++.
T Consensus 180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~-------~~l~ 251 (371)
T PRK05166 180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSD-------PELV 251 (371)
T ss_pred HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCC-------HHHH
Confidence 99999999875 889999999999885443222222222 23579999999999999999999988753 3566
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+++.++|.++..++.. ..++++..+.++++++.+.+.|++. ++. + .|.+|+|+|++++.
T Consensus 252 ~~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~----- 320 (371)
T PRK05166 252 GLLDRVRTP-FNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR----- 320 (371)
T ss_pred HHHHHhccC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence 666655433 46788888888887754 4678888899999999999999987 776 4 56678899998753
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++.++...++ ++||.+.||..++..+++|++++. .++.+++.+.|+++
T Consensus 321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~-~~~~~~l~~~l~~i 368 (371)
T PRK05166 321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGS-PEENDHFVAALDKV 368 (371)
T ss_pred --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCC-HHHHHHHHHHHHHH
Confidence 3567777665 569999999877778899999995 33345555555444
No 79
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-42 Score=330.62 Aligned_cols=358 Identities=17% Similarity=0.222 Sum_probs=264.8
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC---CCcEEEcCCHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS---PDDVYLTAGCKQA 121 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~---~~~i~~~~g~~~a 121 (421)
..++.++|...........+.+.+++.+. .......|+++.|.++||+++++++.+.++ ... .++|++|+|++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~a 81 (388)
T PRK08637 4 TKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTHG 81 (388)
T ss_pred cceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHHH
Confidence 44677777654322222333444433332 223456899999999999999999987553 232 3678999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcc
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCG 196 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG 196 (421)
+..++.+++++||.|++++|+|+.+...+ ...|++++.+++..+ ++++|++++++.++ +.+.++++++||||||
T Consensus 82 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG 160 (388)
T PRK08637 82 LSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPTG 160 (388)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCC
Confidence 99999999999999999999999998875 468999999987422 34689999988776 4455677889999999
Q ss_pred cccCHHHHHHHHHHHHh-----cCcEEEEcccccccccCCCCcccc-ccc-CCCCCE--EEEcccccccCCCCceEEEEE
Q 014631 197 NVFTYQQLQKIAEKARK-----LGIMVISDEVYDHLTFGSTPYVRM-GVF-GSTVPV--ITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~~ 267 (421)
.+++.+++++|+++|++ ||++||+||+|.++.+++....++ ..+ +..+++ ++++|+||.|++||+|+||++
T Consensus 161 ~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~~ 240 (388)
T PRK08637 161 YTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFIT 240 (388)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEEE
Confidence 99999999999999875 899999999999998877543332 222 334464 445699999999999999999
Q ss_pred eeCCCcchhHHHHHHHHhhh----c-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcC---CCc
Q 014631 268 TSDPSGILQELRIVDSIKGY----L-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEI---PCI 338 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~---~g~ 338 (421)
++.+.+ .++++.+.+... . ....++|.+.|.++..+|+... ..+..+.+..++++++.+.+.|++. +++
T Consensus 241 ~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~~ 318 (388)
T PRK08637 241 FGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDAW 318 (388)
T ss_pred EccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCc
Confidence 753100 012455555431 1 1234678899999999997522 2344555667888888888888754 256
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
. +..|++|+|+|++++.. ++.+++..+++++||.+.+. .++++|++++ .+.+++++++++|.++++.+
T Consensus 319 ~-~~~~~~g~~~~~~l~~~------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 319 Q-AYPFNSGYFMCLKLKGV------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred c-cccccceEEEEecCChH------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 6 45788999999998621 35678887777889988753 2578999998 68999999999999998765
Q ss_pred h
Q 014631 418 A 418 (421)
Q Consensus 418 ~ 418 (421)
+
T Consensus 388 ~ 388 (388)
T PRK08637 388 R 388 (388)
T ss_pred C
Confidence 3
No 80
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.7e-43 Score=331.39 Aligned_cols=335 Identities=20% Similarity=0.326 Sum_probs=270.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++|+.|.+. +++++.+.+++.+.+.. .....|++ .|.++||+++++|+++.+|.++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~~----~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNENP----YPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCCC----CCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 56999999866 58889999999988753 23457854 6889999999999999889889999999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~ 201 (421)
.+++++++++||.|+++.|+|..+...+...|.+++.++. ++++++|++++++.+. .+++++++++|+||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999989988777764 3467899999999886 467889999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+++| ++++|+||+|+++.+.+.. ......+..+++++++||||.|+++|+|+||++++ ++++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~--------~~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA--------PAVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC--------HHHH
Confidence 9999888877 6899999999998765532 22222233457899999999999999999999985 4677
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+..... ..+.+++.|.++.++++. ...+.+..++++++++.+.+.|++. |+. +..|.+++++|..++
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------ 316 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------ 316 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence 77766553 346788999998888864 2344455677888899999999887 777 446777777775553
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
+...+...+ .++||.+.+. +.++++|++++ +.+++++++++|++++..
T Consensus 317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~-~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIG-TPEENDAFLAALAEVLAT 364 (368)
T ss_pred --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecC-CHHHHHHHHHHHHHHHHH
Confidence 345565554 6789999874 34689999997 457889999999888754
No 81
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=9.6e-43 Score=328.11 Aligned_cols=329 Identities=17% Similarity=0.279 Sum_probs=259.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++++|+.|.+. +++++.+.+++.+.+.. ...|++. +..+||+++|+|+ ++++++|++|+|+++++
T Consensus 21 ~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~i 87 (360)
T PRK07392 21 PDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAELL 87 (360)
T ss_pred cccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 4578999998744 57788999998887764 4578765 4689999999998 47899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc---cCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW---EVDLDGLEALADENTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~---~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~ 199 (421)
..+++++. +||.|++++|+|..+...++..|.+++.++.+.++++ ..+++++++.. ++++++++++||||||.++
T Consensus 88 ~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~ 165 (360)
T PRK07392 88 TWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLW 165 (360)
T ss_pred HHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCc
Confidence 99998875 6899999999999999999999999999998765543 24566665543 4678899999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+.+++.+ +++++++ +|+||+|.++.+.+.....+..++..+++++++||||.|+++|+|+||++++ ++
T Consensus 166 ~~~~l~~---l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~--------~~ 233 (360)
T PRK07392 166 SREAILP---LLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAH--------PD 233 (360)
T ss_pred CHHHHHH---HHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCC--------HH
Confidence 9766554 5567785 6669999999876542222233445568999999999999999999999986 34
Q ss_pred HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
+++.+..... ..+++.+.|.++..+++. ..+.+..++.++++++.+.+.|++++++. + .|.+++|+|++++.
T Consensus 234 ~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~--- 305 (360)
T PRK07392 234 RLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG--- 305 (360)
T ss_pred HHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC---
Confidence 6666665443 246888999999999974 45666677788999999999999888887 4 45778999988763
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCH--HHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEP--SALEEGLGRI 410 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~--e~l~~~~~~l 410 (421)
++.++...+++++||.+.||..|+. ++++||+++... +++.++++++
T Consensus 306 ----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~ 356 (360)
T PRK07392 306 ----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAI 356 (360)
T ss_pred ----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHH
Confidence 3667777777888999999999864 479999998643 4666655553
No 82
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-42 Score=329.12 Aligned_cols=327 Identities=19% Similarity=0.319 Sum_probs=264.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|+|+.|.+. +++++.+++++.+.. ..+.|++ .+..+||+++++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 5689999999855 467777888886531 2245754 46799999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~ 201 (421)
..++.+++++||+|++++|+|..|...++..|++++.++.+ +++++|++++++.+ .++++++++++|+||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999988899999999998874 35779999999988 6789999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|++.+ +++|+||+|.++.+.+.. ....+..+++++++||||.|+++|+|+||++++ ++++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~--------~~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFP--------LSII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecC--------HHHH
Confidence 9999888753 899999999998754321 222334568999999999999999999999985 3577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+.+.++|.++.++|+. ..++++.++.++++++.+.+.|++++++. + .|.+++|+|+.++..
T Consensus 260 ~~l~~~~~~-~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~---- 330 (380)
T PLN03026 260 EYLWRAKQP-YNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG---- 330 (380)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence 777666543 46778889998888864 46788889999999999999999885454 4 678899999988632
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.++.++...++ ++||.++++..++..+++|||++. .++.+++++.|++
T Consensus 331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 14567777665 789999998766557899999984 4566777776654
No 83
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.4e-42 Score=328.56 Aligned_cols=335 Identities=20% Similarity=0.308 Sum_probs=275.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.|.+. +++++.+.+++.+.+.. ...|++.. ..++|+++++++ ++++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 97 (367)
T PRK02731 31 IADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEIL 97 (367)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 6789999999865 34578889999888764 45787654 479999999998 46788999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++.+++++||+|++++|+|..+...+...|.+++.++. +++++|++++++.++++++++++++|+||||.+++.+
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~ 174 (367)
T PRK02731 98 ELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPAE 174 (367)
T ss_pred HHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCHH
Confidence 9999999999999999999999888888899999998876 3467899999999888889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
+++++++.|+ +|+++|+||+|..+.+.+.....+..++..+++++++||||.|+++|+|+||++++ +++++
T Consensus 175 ~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~--------~~~~~ 245 (367)
T PRK02731 175 EVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAP--------PEIID 245 (367)
T ss_pred HHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCC--------HHHHH
Confidence 9999999875 69999999999988765543333333344567999999999999999999999986 35677
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... .+.+.+.|.++..+++. ..++++.++.++++++.+.+.|++. |+. + .|.+|+|+|++++..
T Consensus 246 ~l~~~~~~-~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~----- 314 (367)
T PRK02731 246 ALNRVRQP-FNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG----- 314 (367)
T ss_pred HHHHccCC-CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC-----
Confidence 77665443 35677889998888864 5677888889999999999999987 777 4 355688999988532
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.++.++...| .++||.+.++..|+.++++|++++ +.++++++++.|+++++
T Consensus 315 ~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~-~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIG-TEEENRRFLAALKEFLA 365 (367)
T ss_pred CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHHHh
Confidence 2466777765 568999999988876789999997 56788999999998864
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.3e-43 Score=328.37 Aligned_cols=327 Identities=21% Similarity=0.318 Sum_probs=267.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~a 121 (421)
+.++++|+.|.+. +++++.+++++.+.+.......|++ .|.+++|+++++|++ ..+ ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~~------~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMENP----YRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAMG------VPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCCC----CCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHhC------cCCCCcEEEcCCHHHH
Confidence 5689999999865 6889999999999887544567876 678999999999984 333 589999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~ 200 (421)
+..++.+++++||+|++++|+|..+...++..|++++.++++ +++++|++++++.+. .+++++++++||||||.+++
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999875 347799999999885 47899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++| +.++|+||+|..+... ...+ .+...+++++++|||| ++++|+|+||++++ +++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~--~~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~--------~~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGD--SWLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGH--------PAW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCc--chHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCC--------HHH
Confidence 99999999998 6789999999987532 1111 2234457999999999 79999999999985 356
Q ss_pred HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
++.+...... .+.+.+.|.++..+++. ...+++.+++++++++.+.+.|++++++. + .|.+++|+|++++
T Consensus 236 i~~~~~~~~~-~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~----- 305 (356)
T PRK04870 236 IAELDKVRPP-YNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP----- 305 (356)
T ss_pred HHHHHHccCC-CcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence 7777665532 35777888888777764 34578888899999999999999888886 4 4667789999886
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+..++.. +++++||.|.+|..|+. .+++|++++. .++.++++++|.++
T Consensus 306 ---~~~~~~~-~l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFD-GLKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHH-HHHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 2455554 55788999999988853 5799999994 57778888888765
No 85
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-42 Score=318.94 Aligned_cols=332 Identities=20% Similarity=0.386 Sum_probs=279.2
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
..+++|+.+.-. +++++.+++++.+.+.. ++.|++. ...+++++++++++. .++++|++++|+++.+.
T Consensus 22 ~~~i~LssNenP----~gp~~~~~~~~~~~~~~--~~rYPd~-~~~~l~~a~a~~~~~-----~~~~~V~~gnGsde~i~ 89 (356)
T COG0079 22 PGIIKLSSNENP----YGPPPKVIEAIRAALDK--LNRYPDP-DYRELRAALAEYYGV-----VDPENVLVGNGSDELIE 89 (356)
T ss_pred ccceeecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCC-cHHHHHHHHHHHhCC-----CCcceEEEcCChHHHHH
Confidence 368999988733 47779999999888773 5688766 579999999999842 67899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
.++++++.+||+|+++.|+|..|...++..|++++.++..+ |.+|++.+.+.+.++++++++||||||||..++.++
T Consensus 90 ~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~ 166 (356)
T COG0079 90 LLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREE 166 (356)
T ss_pred HHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHH
Confidence 99999999999999999999999999999999999998754 789999999998888999999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
++++.+.+.+ +.++|+||+|.+|.. ..... .....+++++++||||+||++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~~~--l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~--------~~~i~~ 233 (356)
T COG0079 167 LRALLEALPE-GGLVVIDEAYIEFSP--ESSLE--LLKYPPNLIVLRTFSKAFGLAGLRVGYAIAN--------PELIAA 233 (356)
T ss_pred HHHHHHhCCC-CcEEEEeCchhhcCC--chhhh--hccCCCCEEEEEecHHhhhcchhceeeccCC--------HHHHHH
Confidence 9999999988 999999999999763 22222 2224567999999999999999999998875 579999
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+.+.+..+ +.|.+++.++.++++. .+++++..+.....++++.+.|++++ +..+ .|+.++|++++++..
T Consensus 234 l~~vr~p~-~v~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~~------ 302 (356)
T COG0079 234 LNKVRPPF-NVSSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPDA------ 302 (356)
T ss_pred HHHhcCCC-CCCHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCCc------
Confidence 99998754 7888999999999975 48899999999999999999999984 4413 677799999998741
Q ss_pred ChHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMA-VGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
....+... +.++||+++.... ...++++||++++.+|. ++++++|.++++.
T Consensus 303 ~~~~l~~~-L~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 303 EAAALAEA-LLKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred cHHHHHHH-HHHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 22345554 4667999999865 22367999999987777 9999999988764
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.3e-42 Score=323.55 Aligned_cols=336 Identities=18% Similarity=0.266 Sum_probs=272.4
Q ss_pred CCCe-eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 43 PRPI-IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~-i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
|.++ ++|+.|++. +++++.+.+++.+.+.. ...|++. +..+||+++|+++ ++++++|++|+|++++
T Consensus 30 g~~~~~~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~ 96 (369)
T PRK08153 30 GRPFRARIGANESG----FGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGL 96 (369)
T ss_pred CCcceeEecCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHH
Confidence 5554 699999865 67888999999887653 3468765 4799999999998 4788999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccCceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~ 200 (421)
+..++.+++++||.|++++|+|+.+...+...|.+++.+|.+.+ .+|++++++.+ .++++++++++|+||||.++|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~ 173 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHP 173 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999888889999998887432 47899987765 457889999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++|+ +|++||+||+|..+.+++. ..++.. ..+++++++||||.|+++|+|+||++++ +++
T Consensus 174 ~~~l~~l~~~~~-~~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~--------~~~ 241 (369)
T PRK08153 174 AADIVAFIEALP-ETTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGA--------PGT 241 (369)
T ss_pred HHHHHHHHHhCC-CCcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecC--------HHH
Confidence 999999999887 4999999999999876543 223222 2357999999999999999999999985 357
Q ss_pred HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
++.+...... .+.+.++|.++.++|+. ..++++.++.++++++.+.+.|++. |+. . .|.+++|+|+.++...
T Consensus 242 ~~~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~~-- 313 (369)
T PRK08153 242 IKAFDKVRNH-FGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRDG-- 313 (369)
T ss_pred HHHHHHhhcC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCCc--
Confidence 7777665543 46889999999999963 5678888899999999999999876 766 4 4788999998875211
Q ss_pred CCCChHHHHHHHHhhcCeeEE-eCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 361 GISDDMEFALQLAKEESVIVL-PGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.....+..++ .++||.+. |+.. ...+++|++++ ++++++.+++.|.++++.+++
T Consensus 314 --~~a~~l~~~l-~~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 314 --AFARAVLDGL-IARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred --ccHHHHHHHH-HHCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 1345666655 56799995 6543 23569999998 678999999999999987664
No 87
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4e-42 Score=323.83 Aligned_cols=328 Identities=17% Similarity=0.316 Sum_probs=263.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|+|+.|.+. +++++.+.+++.+.+... ...|++. +.++||+++|+++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4578999999966 466788999998877643 3578654 6699999999998 47889999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++++++++||+|++++|+|..+...++..|.+++.++.+ +++++|++++++ .++++++++||||||.++|.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999998899999999998874 356789998864 356789999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++++ |+++|+||+|..+. +....++ .+..+++++++||||.|+++|+|+||++++ +++.+
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~--------~~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGH--------PELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecC--------HHHHH
Confidence 9999998654 99999999998753 3322222 233467899999999999999999999985 35677
Q ss_pred HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 283 SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 283 ~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
.+...... ..+.+.+.|.++..++.. ..++++.+++++++++.+.+.|+++ |+. + .|.+++|+|+.++.
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~---- 301 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS---- 301 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence 77665432 235778899998888864 4667788889999999999999987 776 4 46678899988763
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.+..++...+ .++||.+.+.......+++|++++ +.+++++++++|++++.
T Consensus 302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 1466777665 677999986433333579999998 56899999999998764
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=5.5e-42 Score=322.83 Aligned_cols=325 Identities=17% Similarity=0.215 Sum_probs=260.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
+++++|+.|.+. +++|+.+.+++.+.+... ..|++.. ..+||+++++++ ++++++|++|+|+++++.
T Consensus 43 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~--~~Y~~~~-~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANECP----LGPSPAARDAAARSAALS--GRYDLEL-EDDLRTLFAAQE------GLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCCC----CCCCHHHHHHHHHHHHHh--cCCCCch-HHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence 568999999865 578899999998887542 4686554 789999999987 478999999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
.++.+++++||+|++++|+|..+...++..|.+++.++.+. ++.+|++++++. .++++++++++||||||.+++.++
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence 99999999999999999999999999999999999998753 467899999876 457889999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
++++++.++ +|+++|+||+|..+.. .. ......+..+++++++||||.||++|+|+||++++ +++++.
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~--~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~--------~~~i~~ 254 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSD--AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAAR--------PDLLAK 254 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhcc--Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecC--------HHHHHH
Confidence 999999764 5999999999987642 11 11112233568999999999999999999999985 356677
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+... . ...++.+.+.++..++.. ..++++.+++++++++.+.+.|+++ ++. +..|++++| +++++.
T Consensus 255 l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~f~-~~~~~~------- 320 (370)
T PRK09105 255 LARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQANCF-MVDVKR------- 320 (370)
T ss_pred HHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCcEE-EEeCCC-------
Confidence 6665 2 235777888888888864 5778888899999999999999987 777 446666654 566642
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+..++...|+ ++||.+. ..|. .++++|++++. +++++++++.|++++
T Consensus 321 ~~~~l~~~L~-~~gI~v~--~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 PAKAVADAMA-KQGVFIG--RSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred CHHHHHHHHH-HCCcEEe--cCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 4567777775 5599983 3343 36899999984 577888888888765
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2e-41 Score=317.85 Aligned_cols=327 Identities=19% Similarity=0.315 Sum_probs=260.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
...++|+.|.+. +++|+.+.+++.+.+.......|++. +..++|+++|+++ ++++++|++|+|+++++.
T Consensus 22 ~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l~ 90 (351)
T PRK14807 22 PYKYKMDANETP----FELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEIIH 90 (351)
T ss_pred CceeEccCCCCC----CCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHHH
Confidence 356899999875 67889999999988765445678654 4689999999997 477899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 202 (421)
.++.+++++||+|++++|+|..+...++..|++++.++.+ +++++|++++++.+++ +++++++++|+||||.+++.+
T Consensus 91 ~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~ 168 (351)
T PRK14807 91 LIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIERE 168 (351)
T ss_pred HHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999899999999998875 3467999999998865 789999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
+++++++ +++.++|+||+|.++. +....+ ..+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 169 ~l~~l~~---~~~~~~ivDe~y~~~~--~~~~~~--~~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~--------~~~~~ 233 (351)
T PRK14807 169 DIIKIIE---KSRGIVVVDEAYFEFY--GNTIVD--VINEFENLIVLRTLSKAFGLAGLRVGYAVAN--------ENILK 233 (351)
T ss_pred HHHHHHH---hCCCEEEEeCcchhhc--ccchHH--HhhhCCCEEEEecchHhcccchhceeeeecC--------HHHHH
Confidence 8777765 5567899999998863 332222 1233468999999999999999999999985 35777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... .+.+.+.|.++..+++. .++++..+.++++++.+.+.|++++|+. + .|.+|+|+|++++
T Consensus 234 ~~~~~~~~-~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~------- 300 (351)
T PRK14807 234 YLNLVKSP-YNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK------- 300 (351)
T ss_pred HHHHccCC-CCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC-------
Confidence 77665443 45678899999888864 4567777788899999999998888887 4 4566889998886
Q ss_pred CChHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMA-VGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+...+... +.++||.+.++.. ++..+++|++++.. ++.+++++.|++++
T Consensus 301 -~~~~~~~~-l~~~gV~v~~~~~~~~~~~~iRis~~~~-~~~~~l~~~l~~~~ 350 (351)
T PRK14807 301 -DADYVYQG-LLERGILVRDFSKVEGLEGALRITVSSC-EANDYLINGLKELL 350 (351)
T ss_pred -CHHHHHHH-HHHCCEEEEECCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHhh
Confidence 34555555 4567999988653 34468999999853 55677777777653
No 90
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=1.8e-41 Score=318.44 Aligned_cols=328 Identities=22% Similarity=0.411 Sum_probs=268.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+.++|+|++|.+. ++.|+.+.+++.++... ...|++..+ +++|++++++++ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~~------~~~~~i~~~~G~~~~ 83 (346)
T TIGR01141 17 GGKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYYG------VDPEQILLGNGSDEI 83 (346)
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHhC------cChHHEEEcCCHHHH
Confidence 35689999999965 57788899999988653 357876665 999999999983 678899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++.++.++||+|++++|+|..+...++..|.+++.++.+.+ +.+|++++++.+.++++++++++|+||||..++.
T Consensus 84 l~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 161 (346)
T TIGR01141 84 IELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSR 161 (346)
T ss_pred HHHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999888888999999999987543 5689999999888889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++++++.++ +|+++|+|++|+.+...+. ..+ .....+++++++|+||+|+++|+|+||++++ +++.
T Consensus 162 ~~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~-~~~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~ 229 (346)
T TIGR01141 162 SDIEAVLERTP-EDALVVVDEAYGEFSGEPS-TLP--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIAN--------AEII 229 (346)
T ss_pred HHHHHHHHhCC-CCcEEEEECchhhhcCCcc-HHH--HHhhCCCEEEEehhhHhhhchhhhceeeecC--------HHHH
Confidence 99999999887 7999999999997664322 112 1222346899999999999999999999985 3577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+.+.+.|.++..+++. ..++++.+++++++++.+.+.|++++|+. + .|.+++|+|+.++.
T Consensus 230 ~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~----- 299 (346)
T TIGR01141 230 DALNKVRAP-FNLSRLAQAAAIAALRD--DDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR----- 299 (346)
T ss_pred HHHHhccCC-CCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC-----
Confidence 777665433 35678888888888864 23678888999999999999999888887 4 45668899988863
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l~~~~~~l 410 (421)
+..++...| .++||.+.||..|+. .+++|+|++ ++++++++++.|
T Consensus 300 --~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 300 --DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred --CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 356677665 567999999988744 689999988 678899998876
No 91
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1e-40 Score=313.23 Aligned_cols=324 Identities=16% Similarity=0.208 Sum_probs=256.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.+++||+.|.+. +++++.+++++.+.+.. ...|++..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 6789999999855 57788899999988764 357988889999999999998 46899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.++++ +++ +.++++.|+|..+...++..|.+++.++++. ++++|++.+ .++++++++++|+||||.++|.+
T Consensus 89 ~~~~~--l~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~--~~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 89 ALLAR--LRP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDP--PFRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHHHh--cCC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCc--ccCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 99988 466 4677889999999999999999999998753 367888755 35678899999999999999977
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++.+ +|+ ++.++|+||+|+++.. +. ..++...+ .+++++++||||.|+++|+|+||++++ +++++
T Consensus 160 ~l~~---l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~~-~~~~i~i~S~SK~~~l~GlRiG~~~~~--------~~~~~ 224 (349)
T PRK07908 160 QLLA---LRR-PGRILVVDEAFADAVP-GE-PESLAGDD-LPGVLVLRSLTKTWSLAGLRVGYALGA--------PDVLA 224 (349)
T ss_pred HHHH---HHh-cCCEEEEECcchhhcc-CC-cccccccc-CCCEEEEeecccccCCccceeeeeecC--------HHHHH
Confidence 6554 554 4778889999998753 32 23433332 347899999999999999999999985 35777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... ...+++.+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 225 ~~~~~~~~-~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------ 295 (349)
T PRK07908 225 RLTRGRAH-WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------ 295 (349)
T ss_pred HHHhcCCC-CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence 77665443 34566777777777763335678888999999999999999987 777 5577889999998862
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.. .+..+++++||.+.||..|.. ++++|||++ +++++++++++|++++.
T Consensus 296 --~~-~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 --AE-LLRKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred --HH-HHHHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 33 445566888999999998853 689999996 55678888888887654
No 92
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.7e-41 Score=296.16 Aligned_cols=329 Identities=22% Similarity=0.386 Sum_probs=275.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCC--CCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCce
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPC--KLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-RHTRLE 156 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~--~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~ 156 (421)
..|.+..|++++|+++|+++.+.+|- ..+|+++++++|+|.+++.+...|.+|||..+++.|.|+++..-+ -..|++
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgve 194 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVE 194 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCce
Confidence 46788899999999999999986653 458899999999999999999999999999999999999985443 467999
Q ss_pred eEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG 230 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 230 (421)
++++.....++++++++++|+++.+ +.++++++||+||-|++++++++..++++|.++|+.+|+||+|+.-+|+
T Consensus 195 ivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~ 274 (471)
T KOG0256|consen 195 IVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVFD 274 (471)
T ss_pred EEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhcccccC
Confidence 9999998889999999999987743 6789999999999999999999999999999999999999999999999
Q ss_pred CCCcccccccC-----CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHH
Q 014631 231 STPYVRMGVFG-----STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI 305 (421)
Q Consensus 231 ~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (421)
...+.++..+. ..+++-++.|+||-||+||+|+|.++..+ ..+.....+... ++..++..|+.+...
T Consensus 275 ~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~n-------e~VvsaA~kmss-f~~vSs~tQ~~la~L 346 (471)
T KOG0256|consen 275 KSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNN-------EDVVSAATKMSS-FGLVSSQTQYLLASL 346 (471)
T ss_pred ccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecC-------hHHHHHHHHHhh-ccCCcHHHHHHHHHH
Confidence 88877765542 34568888999999999999999999865 346665555544 357888999999999
Q ss_pred hhccc--hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEe
Q 014631 306 FKNTK--EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 306 l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~ 382 (421)
|++.. +.++.+..++++.+..++.+.|+++ ||.+. ...+|+|+|+.+...-... .....++...++.+-++-+.|
T Consensus 347 LSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSp 424 (471)
T KOG0256|consen 347 LSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLSP 424 (471)
T ss_pred hchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccCC
Confidence 98733 6788899999999999999999998 88855 7888999999986542211 112346667777777999999
Q ss_pred CCCCCC--CCeEEEEecCCHHHHHH-HHHHHHHHHHHhh
Q 014631 383 GMAVGM--KNWLRITFAIEPSALEE-GLGRIKAFCQRHA 418 (421)
Q Consensus 383 g~~~~~--~~~iRi~~~~~~e~l~~-~~~~l~~~~~~~~ 418 (421)
|..|.. ++|+|+|+++..++..+ ++++|+.++....
T Consensus 425 G~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~~ 463 (471)
T KOG0256|consen 425 GSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQV 463 (471)
T ss_pred CCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhhh
Confidence 998754 79999999965555555 9999999987543
No 93
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-41 Score=317.80 Aligned_cols=320 Identities=18% Similarity=0.317 Sum_probs=254.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
..++|+.+... +++++.+ .....+.|+... ..++++++++++ ++++++|++|+|+++++..
T Consensus 29 ~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~~ 89 (351)
T PRK01688 29 GDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIEL 89 (351)
T ss_pred CceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHHH
Confidence 45899888744 3444432 112345786544 479999999997 4789999999999999999
Q ss_pred HHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 125 ILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 125 ~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
++++++++| |.|+++.|+|..|...++..|++++.++.+. ++++|++++++.+ +++++++++|||||||..++.++
T Consensus 90 ~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~ 166 (351)
T PRK01688 90 LIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQD 166 (351)
T ss_pred HHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHH
Confidence 999999997 8999999999999999999999999998753 4789999999887 57899999999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
+++|++.|++ +.++|+||+|.+|.... . ....+...+++++++||||.||++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~--------~~~i~~ 234 (351)
T PRK01688 167 LRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLAN--------EEVINL 234 (351)
T ss_pred HHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCC--------HHHHHH
Confidence 9999999986 67899999999976321 1 1122234568999999999999999999999985 467777
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+...... .+.+.+++.++.++|......++.+..+.++++++++.+.|++++++..+ .|++++|+|++++
T Consensus 235 l~~~~~~-~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps~~nfi~~~~~-------- 304 (351)
T PRK01688 235 LLKVIAP-YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-FDSETNYILARFT-------- 304 (351)
T ss_pred HHhccCC-CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------
Confidence 7766543 35666778787788864334677888888999999999999988776423 6778899998885
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEEEecCCHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMAV-GMKNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi~~~~~~e~l~~~~~~l 410 (421)
+..++...| .++||.++++..+ +..+++||+++ +.++.++++++|
T Consensus 305 ~~~~l~~~L-~~~gi~vr~~~~~~~~~~~iRis~~-~~~e~~~l~~al 350 (351)
T PRK01688 305 ASSAVFKSL-WDQGIILRDQNKQPGLSNCLRITIG-TREECQRVIDAL 350 (351)
T ss_pred CHHHHHHHH-HHCCeEEEECCCcCCCCCeEEEeCC-CHHHHHHHHHhh
Confidence 356676666 4679999987654 55789999998 458888888876
No 94
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=8.8e-41 Score=314.44 Aligned_cols=304 Identities=18% Similarity=0.298 Sum_probs=244.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCcee
Q 014631 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEI 157 (421)
Q Consensus 79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~ 157 (421)
...|++.. ..+||+++++++ ++++++|++|+|+++++..++.+++.+| |.|++++|+|..+...++..|.++
T Consensus 53 ~~~Y~~~~-~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 53 TRRYPDPQ-PPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred hccCCCCC-HHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 35787554 689999999998 4688999999999999999999999999 799999999998888889999999
Q ss_pred EeeeccC-CCCccCCHHHHHhh-hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 158 RHFDLLP-EKGWEVDLDGLEAL-ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 158 ~~~~~~~-~~~~~~d~e~l~~~-~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
+.++++. ++++.+|++++++. ..++++++++++||||||.+++.++++++++.|+ ++.++|+||+|.++.+...
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~-~~~~iI~Deay~~f~~~~~--- 201 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQ-GKALVVVDEAYGEFSDVPS--- 201 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCC-CCcEEEEeCcchhhcCCcc---
Confidence 9999743 34677899998654 4668899999999999999999999999999986 4789999999999874321
Q ss_pred cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHH
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
.+...+..+++++++||||.|+++|+|+||++++ +++++.+.+.... .+.+.+.|.++..+|+.....+..
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~--------~~l~~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~ 272 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIAN--------AELIAVLRRCQAP-YPVPTPCAALAEQALSAPALAVTA 272 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCC--------HHHHHHHHhccCC-CCCCHHHHHHHHHHHhcccHHHHH
Confidence 1222344568999999999999999999999986 4678888777654 366778888888888764345566
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-CCCCeEEE
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-GMKNWLRI 394 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~iRi 394 (421)
+..+.++++++.+.+.|++++++..+ .|.+|+|+|++++ +..++... ++++||.|.+|..| +.++++||
T Consensus 273 ~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~--------~~~~~~~~-l~~~gI~v~~~~~~~~~~~~~Ri 342 (364)
T PRK04781 273 RRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD--------DAEAAFQA-LLAAGVVVRDQRAAPRLSDALRI 342 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHH-HHHCCeEEeeCCCCCCCCCeEEE
Confidence 66678899999999999988776423 6788999999886 24555554 57889999999765 34679999
Q ss_pred EecCCHHHHHHHHHHHHHH
Q 014631 395 TFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 395 ~~~~~~e~l~~~~~~l~~~ 413 (421)
+++. .++.++++++|+++
T Consensus 343 s~~~-~~~~~~l~~al~~~ 360 (364)
T PRK04781 343 TLGT-PEQNDRVLAALQRT 360 (364)
T ss_pred eCCC-HHHHHHHHHHHHHH
Confidence 9985 45667777776654
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2.3e-40 Score=311.42 Aligned_cols=329 Identities=21% Similarity=0.326 Sum_probs=262.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
..+|+|+.|.+. +++++.+.+++.+.+.. ...|+ ..|..++|+++++++ ++++++|++|+|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~-~~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYP-DMGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCC-CCcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 468999999876 46678899999887754 35675 578999999999998 367889999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
.++..++++||+|+++.|+|..+...++..|.+++.++.+++ +++|++++++.++++++++++++|+||||.+++.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD--HTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC--CCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 999999999999999999999888888999999999887543 568999999998888999999999999999999998
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
+.++++.+ ++|+++|+||+|.++.+++....++...+..+++++++||||.|+++|+|+||++++ +++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~--------~~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH--------PEVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC--------HHHHHH
Confidence 88888876 479999999999998876543333444445568999999999999999999999985 357777
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+..... ..+.+.+.|.++..++.. ... +.+..+.+.+.++.+.+.|++. ++. + .+.+|+|+|+.++.
T Consensus 238 ~~~~~~-~~~~s~~~q~~a~~~l~~-~~~-~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~------- 304 (352)
T PRK03321 238 LRKVAV-PFSVNSLAQAAAIASLAA-EDE-LLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE------- 304 (352)
T ss_pred HHHhcC-CCCCCHHHHHHHHHHhcC-HHH-HHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence 766543 347788999888888863 233 3444455556677888999886 776 4 34568899998852
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
++.++...+ +++||.+.+ |+ ..++||+++ +.++.++++++|.+++.
T Consensus 305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 356677665 778999987 33 356999985 56788888888887653
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=7.8e-40 Score=309.16 Aligned_cols=325 Identities=20% Similarity=0.339 Sum_probs=258.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~a 121 (421)
+.++|+|+.|.+. +++++.+++++.+.+.. ...|++.. .+++|+++++++ ++++++|++ ++|++++
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 4589999999855 46778888988887764 35677654 499999999998 467889999 7899999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..++++++++||+|++++|+|..+...++..|++++.++. ++++.+|++++++.+.++++++++++|+||||.+++.
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 99999999899999999999999998888999999988874 3456799999999888788999999999999999997
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++.++ |+++|+++|+||+|.++. +.....+ .+..+++++++||||.|+++|+|+||++++ ++++
T Consensus 178 ~~l~~l---~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~--------~~~~ 242 (361)
T PRK00950 178 EDIRKI---LESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVP--------EWLI 242 (361)
T ss_pred HHHHHH---HHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCC--------HHHH
Confidence 766655 567899999999998865 2222221 223357899999999999999999999985 3577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+.+.+.+.++..+++. .+++++..++++++++.+.+.|. +. + .|.+++|+|+.++.
T Consensus 243 ~~~~~~~~~-~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~----- 308 (361)
T PRK00950 243 DYYMRAKTP-FSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP----- 308 (361)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence 777665543 34677888888888864 46677788888888888887775 34 3 46678899998842
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
.+..+++..+. ++||.+.||..|.. ++++|++++ +.+++++++++|++++
T Consensus 309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 14677777764 57999999988754 468999998 5578999999998875
No 97
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.5e-40 Score=309.09 Aligned_cols=321 Identities=16% Similarity=0.252 Sum_probs=249.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+...++|+.+.+. +++++.+ ... ....|++. +..+||+++|+++ ++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~ne~~----~~~~~~~------~~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i 90 (354)
T PRK04635 30 GRGDIWINANESP----FNNEYKL------DLA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI 90 (354)
T ss_pred CCCcEEeeCCCCC----CCCChhh------hhH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 3466899998855 2344332 111 24578765 4799999999997 57899999999999999
Q ss_pred HHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
.+++++++++| |+|++++|+|..|...++..|++++.+|++. ++.+|++.+++ + ++++++++++||||||.+++.
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~ 166 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR 166 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence 99999999999 8999999999999999999999999998753 46789988874 3 578999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|++.|+ +++||+||+|.++... .....+ ....+++++++||||+|+++|+|+||++++ ++++
T Consensus 167 ~~l~~l~~~~~--~~~vivDeay~~~~~~-~s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~--------~~~~ 233 (354)
T PRK04635 167 ADIEQLIEMTP--DAIVVVDEAYIEFCPE-YSVADL--LASYPNLVVLRTLSKAFALAGARCGFTLAN--------EELI 233 (354)
T ss_pred HHHHHHHHhCC--CcEEEEeCchHhhccC-cchHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCC--------HHHH
Confidence 99999999876 4999999999987632 111111 233467899999999999999999999985 4577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+.+.+.+.++.+++......++.+..+.++++++.+.+.|++++++. +..+ .|.|+|++++
T Consensus 234 ~~l~~~~~~-~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~------ 304 (354)
T PRK04635 234 EILMRVIAP-YPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-VLEG-NGNYVLAKFD------ 304 (354)
T ss_pred HHHHhhcCC-CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-ECCC-CCcEEEEECC------
Confidence 777654432 356667788887888643345567777889999999999999886676 4344 5678998885
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
+..++.. ++.++||.++++..++.++++|+|++ +.+++++++++|++
T Consensus 305 --~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~-~~e~~~~l~~al~~ 351 (354)
T PRK04635 305 --DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFS-NRAETDKLIGLIRN 351 (354)
T ss_pred --CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHH
Confidence 2445544 56788999987655445679999987 46888888888764
No 98
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-39 Score=300.03 Aligned_cols=318 Identities=18% Similarity=0.271 Sum_probs=247.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+.++++|+.|++. +++|+.+.+++.+.+.....+.|++. +.++||+++++|+++.+ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~~----~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNENP----FPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 36789999999866 68889999999888765444457554 78999999999997642 679999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+.++++.+ |.|++++|+|..|...++..|++++.++.+. ++.++... + ..++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~----~-~~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTK--DLRIPEVN----V-GEGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCC--cCCCChhH----c-cCCCEEEEeCCCCCCCCCcCH
Confidence 99999887 7899999999999999999999999998753 23344222 2 246889999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+ +++++||+||+|.++. +....++ ....+++++++||||.|+++|+|+||++++ ++++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~~--~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~--------~~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVDL--LKKYENLAVIRTFSKAFSLAAQRIGYVVSS--------EKFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHHH--HHhCCCEEEEEechhhccCcccceEEEEeC--------HHHH
Confidence 9998886 4799999999999974 3222221 223458999999999999999999999986 3577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+.+.++|.++..+++. ..+..+..+.++++++.+.+.|+++ |+. +..| .|.|+|+.++..
T Consensus 222 ~~l~~~~~~-~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~~---- 291 (335)
T PRK14808 222 DAYNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEKE---- 291 (335)
T ss_pred HHHHHhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCCc----
Confidence 777666533 46778889888888864 3466777778888899999999987 776 4345 566889988631
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+..++.. .+.++||.|+. | .+++||+++.. ++.+++++.|+++
T Consensus 292 --~~~~~~~-~l~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~~ 334 (335)
T PRK14808 292 --EKERLLE-HLRAKNIAVRS---F--REGVRITIGKR-EENDMILKELEVF 334 (335)
T ss_pred --cHHHHHH-HHHHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHhh
Confidence 3445554 45778999985 3 36899998864 6667888777653
No 99
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-39 Score=299.26 Aligned_cols=319 Identities=19% Similarity=0.325 Sum_probs=247.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+..+++|+.|.+. +++++.+.+++.+.+.......|+ ..|.+++|+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYP-HITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 4578999999865 577788999999888654456786 468999999999999 37889999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++..+ +||+|+++.|+|..+...++..|.+++.++.+ +++++|++.+++.. ++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLK--EDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9988776 79999999999999988889999999999875 34679999998865 5678888999999999999987
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++.+++ ++|+++|+||+|.++. +....+ ..+..+++++++||||.|+++|+|+||++++ +++++
T Consensus 161 ~l~~i~----~~~~~ii~De~y~~~~--~~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~--------~~~i~ 224 (337)
T PRK03967 161 EILKVL----ETGKPVVLDEAYAEFS--GKSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIAN--------EEIID 224 (337)
T ss_pred HHHHHH----hcCCEEEEECchhhhc--ccchHH--HHhhCCCEEEEecchHhhcchhhhheeeecC--------HHHHH
Confidence 776654 3699999999999875 222222 1233457999999999999999999999985 35777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... .+.+.++|.++..+++. .++..+..+...++++.+.+.|.+. . .|++++|+|+.++
T Consensus 225 ~~~~~~~~-~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~------- 288 (337)
T PRK03967 225 ALYRIKPP-FSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD------- 288 (337)
T ss_pred HHHhhcCC-CCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence 77766543 36778999999888864 3456666666677788888888753 2 4678899997652
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
+...+ .++||.++++.. ...+++|++++. .++.+++++.|+++.+.+
T Consensus 289 -----~~~~l-~~~gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 289 -----AYDYL-LENGIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEGY 335 (337)
T ss_pred -----HHHHH-HHCCEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHhc
Confidence 34444 457999988653 235799999984 344556666666655443
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.9e-39 Score=299.82 Aligned_cols=295 Identities=18% Similarity=0.206 Sum_probs=228.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeE
Q 014631 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR 158 (421)
Q Consensus 79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 158 (421)
...|+.. -..+||+++++++ +.++++|++|+|+++++..++.. +++| .|++++|+|..|...++..|++++
T Consensus 34 ~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~ 104 (332)
T PRK06425 34 ISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRIS 104 (332)
T ss_pred cccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEE
Confidence 3468644 4689999999998 46899999999999999999974 5776 577779999999999999999999
Q ss_pred eeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631 159 HFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 159 ~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 238 (421)
.+|++. ++.|.+.+++ .+++++++++||||||.+++.+++++|+++|+++|++||+||+|.++.+++. .....
T Consensus 105 ~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~ 177 (332)
T PRK06425 105 ALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVL 177 (332)
T ss_pred EEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHH
Confidence 999753 3456555543 3778999999999999999999999999999999999999999999876542 11122
Q ss_pred ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-chhHHHHH
Q 014631 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-KEDFFSKI 317 (421)
Q Consensus 239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~ 317 (421)
..+..+++++++||||.|++||+|+||++++ +++++.+....... +.+..++. ++... .+.+.++.
T Consensus 178 ~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~--------~~li~~l~~~~~~~-~~~~~~~~----~l~~~~~~~~~~~~ 244 (332)
T PRK06425 178 LNRSYGNVIIGRSLTKILGIPSLRIGYIATD--------DYNMKISRKITEPW-SVCDPAID----FIRSIDLDYVAKHS 244 (332)
T ss_pred HhccCCCEEEEeecHHhcCCchhhheeeecC--------HHHHHHHHHcCCCC-ccCHHHHH----HHHHhhhHHHHHHH
Confidence 2233468999999999999999999999986 35777776654322 23333322 22221 23456777
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEE
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRIT 395 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~ 395 (421)
++.++++++.+.+.|+++ ++. +..+.+|+|+|++++ ++.++...++ ++||.+.||..|+. ++++||+
T Consensus 245 ~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~~~~~~~~l~-~~gi~v~~~~~f~~~~~~~iRis 313 (332)
T PRK06425 245 LDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------DAHDFYSYLL-KNGILVRLLDDYECLGEQYIRIA 313 (332)
T ss_pred HHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------CHHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEE
Confidence 889999999999999987 776 334556889999885 3567777765 57999999998853 4699999
Q ss_pred ecCCHHHHHHHHHHHHHHH
Q 014631 396 FAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 396 ~~~~~e~l~~~~~~l~~~~ 414 (421)
++. .++.++++++|++++
T Consensus 314 ~~~-~~~~~~l~~al~~~~ 331 (332)
T PRK06425 314 IRR-RSFNIKLVNALRNFL 331 (332)
T ss_pred eCC-HHHHHHHHHHHHHHh
Confidence 985 467788888888764
No 101
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=3e-38 Score=293.47 Aligned_cols=309 Identities=17% Similarity=0.179 Sum_probs=234.7
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.++|+|+.+... ..++++.+.+ ..+ ..|+.. ..+||++++++++ +++|++|+|+++++.
T Consensus 20 ~~~i~l~~ne~p---~~~~~~~~~~---~~~-----~~yp~~--~~~Lr~~ia~~~~--------~~~I~it~Gs~~al~ 78 (330)
T PRK05664 20 ADWLDLSTGIAP---WPWPVPAIPA---DAW-----ARLPET--DDGLEAAARAYYG--------APQLLPVAGSQAAIQ 78 (330)
T ss_pred HHheeecCCcCC---CCCCCcccCH---HHH-----HhCCCC--hHHHHHHHHHHhC--------CCCEEECcCHHHHHH
Confidence 357999999522 1122122221 111 246543 3899999999983 479999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
+++ ++.+||+|++++|+|+.+...++..|++++.++.+ ++++.++ +++++++++||||||.+++.++
T Consensus 79 ~~~--~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~ 145 (330)
T PRK05664 79 ALP--RLRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPAR 145 (330)
T ss_pred HHH--HccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHHH
Confidence 886 34799999999999999999999999999888642 3444443 6778899999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
+++|+++|+++|++||+||+|.++. . ..++..+...+++++++||||.|+++|+|+||++++ +++++.
T Consensus 146 l~~l~~~~~~~~~~iI~DE~y~~~~--~--~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~--------~~l~~~ 213 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMDNT--P--QHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAE--------PALLRA 213 (330)
T ss_pred HHHHHHHHHhcCCEEEEECCcccCC--C--cccccccccCCCEEEEeeccccccCCCcceEEEEeC--------HHHHHH
Confidence 9999999999999999999998754 1 123344445568999999999999999999999986 357777
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+...... .+.+.+.|.++..+|.. ..+.++.++.++++++.+.+.|+++ ++. + .+..++|+|+.++
T Consensus 214 ~~~~~~~-~~~~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~-------- 279 (330)
T PRK05664 214 LAELLGP-WTVSGPTRWLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE-------- 279 (330)
T ss_pred HHHhcCC-CCCCHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC--------
Confidence 7766442 35677888888888864 3556777889999999999999987 654 2 2222378887664
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
++.++... +.++||.|.+ |...+++||+++.+.++.+++.+.|+++.++
T Consensus 280 ~~~~~~~~-l~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 DAAALHEF-LARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred CHHHHHHH-HHHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 35566655 5778999975 4456899999997677788888887776543
No 102
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=8.8e-39 Score=297.20 Aligned_cols=312 Identities=18% Similarity=0.250 Sum_probs=248.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
+++++++|+.|.+.. +++ ..+... .....|+++.+ +++|+.+++++ ++++++|++|+|++++
T Consensus 15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~ 76 (330)
T TIGR01140 15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEA 76 (330)
T ss_pred ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHH
Confidence 467889999998552 222 222111 12357877665 99999999998 3678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+..+...+ .+| .|++++|+|..+...++..|.+++.++ |++++++.+. +++++++++|+||||.+++.
T Consensus 77 i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~ 144 (330)
T TIGR01140 77 IYLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPP 144 (330)
T ss_pred HHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCH
Confidence 99987664 677 799999999999999999999988875 7788888874 57789999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc-cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV-FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|+++|+++|+||+|.++.+.. ++.. .+..+++++++||||.|+++|+|+||++++ +++
T Consensus 145 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~--------~~~ 212 (330)
T TIGR01140 145 ETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAH--------PAL 212 (330)
T ss_pred HHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCC--------HHH
Confidence 999999999999999999999999876431 2222 233467899999999999999999999985 356
Q ss_pred HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
++.+...... .+.+.++|.++..+++. ..+.++.+++++++++.+.+.|++++.+. + .|.+++|.|+.++
T Consensus 213 ~~~l~~~~~~-~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~----- 282 (330)
T TIGR01140 213 LARLREALGP-WTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP----- 282 (330)
T ss_pred HHHHHhcCCC-CCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC-----
Confidence 7777666543 35678889999888874 45667788999999999999999985565 4 4667899998876
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l 410 (421)
+..++++.++ ++||.+.||..|.. .+++|++++...++ ++++.+|
T Consensus 283 ---~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 ---DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ---CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 3567777765 57999999999852 47999999976666 7777665
No 103
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=8.2e-38 Score=291.01 Aligned_cols=312 Identities=14% Similarity=0.164 Sum_probs=239.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al 122 (421)
..+++|+.+... ..++++.+.. .. +..|+.. . .+|+++++++++ +. +++|++|+|+++++
T Consensus 24 ~~~i~ls~Nenp---~~~~~~~~~~---~~-----~~~Yp~~-~-~~L~~~ia~~~~------~~~~~~I~i~~Gs~e~i 84 (339)
T PRK06959 24 DAWLDLSTGINP---HGYPVPPVPA---DA-----WRRLPED-D-DGLAACAARYYG------APDAAHVLPVAGSQAAI 84 (339)
T ss_pred hhhceeccCCCC---CCCCCCCCCH---HH-----HHhCCCc-h-HHHHHHHHHHhC------CCCcccEEECcCHHHHH
Confidence 467999988733 1122122211 11 2357654 3 899999999984 43 58999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.++.. ++++|| |++++|+|..|...++..|++++.++.+. +.+. +..+.+++++||||||.+++.+
T Consensus 85 ~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~~----~~~~~v~l~nPnNPTG~~~s~~ 150 (339)
T PRK06959 85 RALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTLP----AALTHLIVVNPNNPTAERLPAA 150 (339)
T ss_pred HHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhcc----ccCCEEEEeCCCCCCCCCCCHH
Confidence 97765 467876 88999999999999999999988876532 2222 2346889999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|++.|++++.++|+||+|.++... .++..+...+++++++||||.|+++|+|+||++++ +++++
T Consensus 151 ~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~--------~~li~ 218 (339)
T PRK06959 151 RLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAA--------PALLA 218 (339)
T ss_pred HHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecC--------HHHHH
Confidence 9999999999999999999999997532 22333323467999999999999999999999986 46788
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+...... .+.+.++|.++.++|+. ..+.++.++.++++++.+.+.|+++ |+. + . .+++|+|++++
T Consensus 219 ~l~~~~~~-~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------- 284 (339)
T PRK06959 219 ALRDALGA-WTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------- 284 (339)
T ss_pred HHHHhcCC-CCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC-------
Confidence 88777543 35678899999999964 4677888899999999999999987 776 3 2 35789998775
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+..++...+ .++||.|+. |+..+++||+++.+.++.+++++.|+++++.+.+
T Consensus 285 -~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 285 -RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred -CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHhh
Confidence 245666655 667999975 3445799999977778999999999888766543
No 104
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.1e-37 Score=287.34 Aligned_cols=302 Identities=15% Similarity=0.249 Sum_probs=221.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++|+|+.|... ++ |+.+++++.+.+.. ...|+. ...+|++++++++ ++|++|+|+++++
T Consensus 7 ~~~~i~l~~~~np----~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~~---------~~I~vt~G~~~al 67 (311)
T PRK08354 7 EEGLIDFSASVNP----YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLFG---------EPIVITAGITEAL 67 (311)
T ss_pred ccceeEecCCCCC----CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHHC---------CCEEECCCHHHHH
Confidence 4578999998533 23 57888999887654 346753 4789999999872 4799999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++..+ .+||+|++++|+|+.+...++..|.+++.++ +|++.+++.++ +++.+++++||||||.+++.+
T Consensus 68 ~~~~~~~-~~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~ 137 (311)
T PRK08354 68 YLIGILA-LRDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK 137 (311)
T ss_pred HHHHHhh-CCCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence 9888544 4899999999999999999999999886543 57888988776 467889999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++++|+++|+++|+++|+||+|.++.+++.. . ..+++++++||||.|+++|+|+||+++ +.+
T Consensus 138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~------~-~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~ 199 (311)
T PRK08354 138 ELKPLLDAVEDRNALLILDEAFIDFVKKPES------P-EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE 199 (311)
T ss_pred HHHHHHHHhhhcCcEEEEeCcchhccccccc------c-CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence 9999999999999999999999998876421 1 145799999999999999999999997 234
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.++..... ...+...+.++..+++. ...++.+.++.+++.++.+.+.+ ...|.++ |+++.++
T Consensus 200 ~l~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~~-~~~~~~~------- 261 (311)
T PRK08354 200 AFRSVRMP-WSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSDAN-FFIKDVG------- 261 (311)
T ss_pred HHHHcCCC-ccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCCCc-EEEEECC-------
Confidence 44444332 23445566666666652 22344444444444444433322 1145554 5555553
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
++.++...+ .++||.+.||..|+.++++||+++..+ +.+++++.|++
T Consensus 262 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~-~~~~l~~al~~ 308 (311)
T PRK08354 262 -DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDRE-ENEKLIRALRE 308 (311)
T ss_pred -CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHH-HHHHHHHHHHH
Confidence 355676655 678999999999987799999998433 23444444443
No 105
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6.1e-38 Score=278.83 Aligned_cols=327 Identities=22% Similarity=0.344 Sum_probs=261.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCC-CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeE
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCK-LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIR 158 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~ 158 (421)
.+|+++.|.++|...+.++....+..+ ..+-+|++|+|.|.++..+++.++++||.|+++.++|.+.....+..|++++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~i 173 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKII 173 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHHHhccccCceEE
Confidence 489999999999999999765333222 2334899999999999999999999999999999999999999999998888
Q ss_pred eeeccCCCCccCCHHHHHhhhcc---------CceEEEEeCC--CCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 159 HFDLLPEKGWEVDLDGLEALADE---------NTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 159 ~~~~~~~~~~~~d~e~l~~~~~~---------~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
+|+.+ ..++++|.+++.+.. ++ -|+.+-| +||||..++.+++++|.++|++||++||+||.|..+
T Consensus 174 pv~md---~~Gi~pE~l~~il~~w~~~~~k~~~p-~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy~L 249 (472)
T KOG0634|consen 174 PVKMD---QDGIDPESLEEILSNWKPGSYKKPKP-HVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYYFL 249 (472)
T ss_pred ecccc---CCCCCHHHHHHHHhcCCcccccCCCC-eEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCcccee
Confidence 77763 336899999987742 23 3556666 899999999999999999999999999999999988
Q ss_pred ccCC---C-----C-----------cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-
Q 014631 228 TFGS---T-----P-----------YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY- 287 (421)
Q Consensus 228 ~~~~---~-----~-----------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~- 287 (421)
.++. . + ..++..++.+++||.+.||||. .+||+|+||+.++. .+++++-..
T Consensus 250 q~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~--------~~l~ril~~a 320 (472)
T KOG0634|consen 250 QMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS--------LFLKRILDLA 320 (472)
T ss_pred eccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH--------HHHHHHhhhc
Confidence 8762 1 1 1223345678899999999999 58999999999862 345554443
Q ss_pred cccccCCchHHHHHHHHHhhccch----hHHHHHHHHHHHHHHHHHHHhhc-CCCc-cccCCCCceeEEEEecCcccc--
Q 014631 288 LNISSGPATFVQGAVPQIFKNTKE----DFFSKIVDILRDTADICYDRIKE-IPCI-TCPRKPEGSMFVMVKLNLSLL-- 359 (421)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~l~~-~~g~-~~~~~~~~~~~~~~~~~~~~~-- 359 (421)
...+.+++.+.|..+.+.|+.-.+ .|+.+.+..|..+++.+..+|.+ +|.- ..+..|.+|+|+|++++....
T Consensus 321 e~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~ 400 (472)
T KOG0634|consen 321 EVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDT 400 (472)
T ss_pred ceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcceEEEEEeccccccc
Confidence 344567899999999999876443 77888889999999999999997 4543 336789999999999972111
Q ss_pred -cCCCChHHHHHHHHhhcCeeEEeCCCCCC------CC-eEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 360 -EGISDDMEFALQLAKEESVIVLPGMAVGM------KN-WLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 360 -~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~-~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.....++.....+.++||.+++|+.|.. .. ++|++++ .+.|+++++++++..+++++-+
T Consensus 401 ~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~f~ 469 (472)
T KOG0634|consen 401 KKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEHFI 469 (472)
T ss_pred ccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHHhh
Confidence 01112467777788999999999999854 23 8999999 7889999999999999998754
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=1.7e-36 Score=285.62 Aligned_cols=346 Identities=32% Similarity=0.558 Sum_probs=276.7
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL 126 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~ 126 (421)
+||+.|.+. +..++.+..++.+.-.......|++..+..++++.++++++..++....++++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888865 3455666666554222233457888899999999999999987776667889999999999999999
Q ss_pred HHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHH
Q 014631 127 TVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQK 206 (421)
Q Consensus 127 ~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 206 (421)
.++.++||+|+++.++|.++...++..|.+++.++.+.+.....+.+.++....++++++++++|+||||..+|.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999999865444332236666667778999999999999999999999999
Q ss_pred HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631 207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG 286 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
|.++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|+||.++.+|.|+|++++++ .++.+.+..
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~-------~~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPP-------EELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCH-------HHHHHHHHH
Confidence 9999999999999999999887665543222233444567889999999988999999999863 246666666
Q ss_pred hccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCCh
Q 014631 287 YLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD 365 (421)
Q Consensus 287 ~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (421)
.... +.+++...+.++..+++... .+.++.+++++++++++.+.|++++... ...+.+++++|+.++.. ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~ 301 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD 301 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence 5433 45788888888888887533 6788888999999999999999874443 23567789999988642 24
Q ss_pred HHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEecCCHHHHHHHHHHHH
Q 014631 366 MEFALQLAKEESVIVLPGMAVG--MKNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 366 ~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
.+.+.+++.++||.+.++..|. .+.++|++++..++++++++++|+
T Consensus 302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 5667778888999999988776 578999999955999999999886
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-35 Score=248.66 Aligned_cols=364 Identities=24% Similarity=0.371 Sum_probs=270.2
Q ss_pred hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHh----cC----CCCCCCCCCCCHHHHHHH
Q 014631 24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR----SA----EFDCYSPSVGILPARRAI 95 (421)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~----~~----~~~~y~~~~g~~~l~~~i 95 (421)
-+.|+.+++.+.+-+. .+..|.|+.|+|... |++.+..++... .+ ..++|..++|...|.+++
T Consensus 13 ~sGi~~lMdDl~d~Lr---t~g~imLggGNPa~i------Pem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~al 83 (417)
T COG3977 13 HSGITQLMDDLNDGLR---TPGAIMLGGGNPARI------PEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDAL 83 (417)
T ss_pred hhhHHHHHHHHHhhcc---CCCceeeCCCCcccC------hhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHH
Confidence 4668888888877663 455999999998743 455555554433 22 356899999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC---CC--CeEEEc-CCCCcchHHHHhhcCceeEe---eeccCCC
Q 014631 96 ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR---PG--ANILLP-KPGFPLYEANARHTRLEIRH---FDLLPEK 166 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~---~g--d~Vl~~-~p~y~~~~~~~~~~g~~~~~---~~~~~~~ 166 (421)
++++++++|++..+++|.+|+|++.+.+.++..+.. .| .+|+.+ .|.|.+|..+...-..=+.+ +.+.+..
T Consensus 84 a~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g 163 (417)
T COG3977 84 AKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAG 163 (417)
T ss_pred HHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCccccccc
Confidence 999999999999999999999999999998877742 34 467776 79999886544321111111 1122222
Q ss_pred C--ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc----c
Q 014631 167 G--WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV----F 240 (421)
Q Consensus 167 ~--~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~ 240 (421)
. +.+|.+++. +.+.+.+|+++-|.||||.+++.+++.+|..+|++||+.+|+|.+|+. +++.+.- .
T Consensus 164 ~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~ 235 (417)
T COG3977 164 QFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATP 235 (417)
T ss_pred ceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceecccccc
Confidence 2 456777764 346788899999999999999999999999999999999999999975 2222211 1
Q ss_pred CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHH-HH-H
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFF-SK-I 317 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~-~ 317 (421)
-..+|++.|.|+||. |+||.|||.+++. +++++.+..... .+..+..+.++.+..+++......+ ++ +
T Consensus 236 ~w~~NiilC~SLSK~-GLPG~R~GIiIan--------e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVI 306 (417)
T COG3977 236 LWNENIILCMSLSKL-GLPGSRCGIIIAN--------EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVI 306 (417)
T ss_pred cCCCCEEEEeehhhc-CCCCcceeEEEcc--------HHHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhh
Confidence 235689999999999 9999999999985 467777766543 3456777888888888887542222 23 2
Q ss_pred HHHHHHHHHHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------
Q 014631 318 VDILRDTADICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------ 388 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------ 388 (421)
+.-|+++.....+.|++ +|. +. ++.|++..|+|+.|.+..+ ++..+.++ +++.||.++||+.|-.
T Consensus 307 rPFY~~~~q~~~~~l~~~lp~~~~~-iHkpEGAIFlWLWf~dLPI----tt~~LYq~-LKa~Gvl~VPG~~FFpGl~~ew 380 (417)
T COG3977 307 RPFYRNRVQTTIAILRRYLPEYRCL-IHKPEGAIFLWLWFKDLPI----TTEELYQR-LKARGVLMVPGHYFFPGLDKEW 380 (417)
T ss_pred hHHHHHHHHHHHHHHHHhcCcccee-eecCCcceeehhhhccCCC----CHHHHHHH-HHhCeEEEecccccCCCCCCCC
Confidence 34566666666666653 333 33 5799999999999877543 46677666 4889999999998743
Q ss_pred ---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 389 ---KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 389 ---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.++|+++..+++++++++++|.+.+++..+
T Consensus 381 pH~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~yq 414 (417)
T COG3977 381 PHTHQCMRMNYVPEPEKIEKGVAILAEEVERAYQ 414 (417)
T ss_pred CCccceEEEecCCCHHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999999999999987654
No 108
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=2e-34 Score=275.98 Aligned_cols=366 Identities=17% Similarity=0.141 Sum_probs=261.3
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcH---HHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTP---VAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
+++++++.+.....+.++ + +..|.++|+|.+|+|.. ++++|+ .+.+++.+++..+. ..|.+..|+++||+++
T Consensus 13 ~~~v~~~~~~~~~~~~~~-l-~~~g~~~~~L~~g~p~~--D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreai 87 (460)
T PRK13238 13 IKMVEPIRLTTREERERA-L-AEAGYNPFLLKSEDVFI--DLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAV 87 (460)
T ss_pred eceeccccccCHHHHHHH-H-HHcCCCEEeCCCCCCCC--CCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHH
Confidence 344444444444443332 1 23489999999999842 234444 67888888876543 4799999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC------CCcc
Q 014631 96 ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE------KGWE 169 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~------~~~~ 169 (421)
+++++ .+.+++|+|+++|+.+++.++++||| |++++|.|..+...+...|++++.++++.. ++|.
T Consensus 88 a~~~~--------~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~ 158 (460)
T PRK13238 88 KDIFG--------YPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFK 158 (460)
T ss_pred HHHhC--------CCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEecccccccccccccc
Confidence 99984 35799999999999999999999999 999999999999989999999999988542 3444
Q ss_pred --CCHHHHHhhhcc----CceEEEEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccc--cccCC-----CCcc
Q 014631 170 --VDLDGLEALADE----NTVAMVIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDH--LTFGS-----TPYV 235 (421)
Q Consensus 170 --~d~e~l~~~~~~----~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~ 235 (421)
+|+++|++.+.+ ++++|++++|+|||| .+++.+++++|.++|++||+++|+|+++.. ..|.. ....
T Consensus 159 g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~ 238 (460)
T PRK13238 159 GNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDK 238 (460)
T ss_pred CCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCC
Confidence 999999999873 689999999999997 999999999999999999999999997743 22211 1111
Q ss_pred cccccCCCCCEEEEcccccccCCCCceE------EEEEeeCCCcchhHHHHHHHHhhhc-----c-cccCCchHHHHHHH
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRL------GWLVTSDPSGILQELRIVDSIKGYL-----N-ISSGPATFVQGAVP 303 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~------G~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~ 303 (421)
++..+ +..++|++|.+.+.|+++ |++++++ +++.++++... . ..++.+...|.|++
T Consensus 239 si~~i-----~~~~~s~~D~~~~Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala 306 (460)
T PRK13238 239 SIKEI-----AREMFSYADGLTMSAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALA 306 (460)
T ss_pred CHHHH-----hhhhcccCcEEEEecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHH
Confidence 22111 111233344433333332 5566543 35677776553 1 12233455577777
Q ss_pred HHhhcc-chhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCee
Q 014631 304 QIFKNT-KEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVI 379 (421)
Q Consensus 304 ~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~ 379 (421)
..|... .+.+...+ .++++++.+.|.+. |+. +..|.+|+|+++++.... .+ ....+.+++.+|+++.||.
T Consensus 307 ~~l~e~~~~~~~~~~----~~~~~~l~~~L~~~-G~~-~~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~ 380 (460)
T PRK13238 307 VGLYEGMDEDYLAYR----IGQVEYLGEGLEEA-GVP-IQTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIR 380 (460)
T ss_pred hhHHHhhChHHHHHH----HHHHHHHHHHHHHC-CCC-eEccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCee
Confidence 666532 23333333 33578899999887 998 448999999999885421 11 0113578999999999999
Q ss_pred EEeCCCCCC-------------CCeEEEEecC---CHHHHHHHHHHHHHHHHH
Q 014631 380 VLPGMAVGM-------------KNWLRITFAI---EPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 380 v~~g~~~~~-------------~~~iRi~~~~---~~e~l~~~~~~l~~~~~~ 416 (421)
+.|+..|.. ...+|++++. +.+.++.+.++|..+.++
T Consensus 381 ~~~~~~f~~~~~~~~~~~~~~~~~~~Rla~~rr~~~~~~~~~~~~~l~~~~~~ 433 (460)
T PRK13238 381 GVEIGSLLLGRDPKTGEQLPAPAELLRLAIPRRVYTQSHMDYVAEALKAVKEN 433 (460)
T ss_pred eecccceecccCCCCccccCCccceEEEecccccCCHHHHHHHHHHHHHHHHh
Confidence 999887632 2679999985 999999999999987643
No 109
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=3.4e-33 Score=267.38 Aligned_cols=333 Identities=14% Similarity=0.152 Sum_probs=248.0
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCC-------CCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSP-------SVGILPARRAIADYLNSELPCKL-SPDDVYL 114 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~ 114 (421)
...++|+.+..+ +.|+.+.+++.+.+...... ..+. ...+.++|+.++++++ + ++++|++
T Consensus 18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLN------APDAKNIVW 86 (401)
T ss_pred CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcC------CCCCCEEEE
Confidence 457899998755 57788999999888652110 0011 1125678888888873 4 6889999
Q ss_pred cCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631 115 TAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 115 ~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i 186 (421)
|+|++++++.+++++ .++||+|++++++|++ +...++..|++++.++.+. ++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence 999999999999987 3789999999999865 4556678899999998753 45689999999999899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL 266 (421)
Q Consensus 187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 266 (421)
++++|+||||..++ +++|.++|+++|+++|+|++|+...+ ...+..++. .+++.|++|.|+.+| +|++
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQALDI---DFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhcCC---CEEEEecccccCCCc--cEEE
Confidence 99999999999965 77888999999999999999975322 223333332 377889999987777 6999
Q ss_pred EeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 267 VTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
++++ ++.+.+.... ...++++...+.++.++++...+....+..++.+++
T Consensus 233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l 304 (401)
T PRK10874 233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL 304 (401)
T ss_pred EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8852 3444433111 112456767777777777653345566678888899
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF 396 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~ 396 (421)
++++.+.|+++||+... .+..+.++++.++.. +..++... |.++||.+.+|..+. ..+++|+|+
T Consensus 305 ~~~l~~~l~~~~g~~~~-~~~~~~i~~~~~~~~------~~~~~~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~ 376 (401)
T PRK10874 305 ATLAEDALAKLPGFRSF-RCQDSSLLAFDFAGV------HHSDLVTL-LAEYGIALRAGQHCAQPLLAALGVTGTLRASF 376 (401)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCcEEEEEECCc------CHHHHHHH-HHHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence 99999999998898744 334445566566531 35566654 577899999988653 357999999
Q ss_pred c--CCHHHHHHHHHHHHHHHHHh
Q 014631 397 A--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+ ++++|++++++.|+++++++
T Consensus 377 ~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 377 APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHHHh
Confidence 8 89999999999999988764
No 110
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=4.4e-33 Score=266.29 Aligned_cols=333 Identities=15% Similarity=0.150 Sum_probs=247.1
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCC-------CCCHHHHHHHHHHHhhhCCCCC-CCCcEEE
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPS-------VGILPARRAIADYLNSELPCKL-SPDDVYL 114 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~-------~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~ 114 (421)
.++++|+.+..+ +.|+.+.+++.+.+...... .+.+. ..++++|+.++++++ + ++++|++
T Consensus 15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g------~~~~~~i~~ 83 (398)
T TIGR03392 15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLN------APDAENIVW 83 (398)
T ss_pred CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEE
Confidence 468999999855 57789999998887542111 12221 124578888998883 4 4789999
Q ss_pred cCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE
Q 014631 115 TAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 115 ~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i 186 (421)
|+|++++++.++.++ .++||+|++++++|++ +...++..|++++.++.+. ++.+|++++++.++++++++
T Consensus 84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence 999999999999987 4789999999999976 4556678899999998753 35689999999998899999
Q ss_pred EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631 187 VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL 266 (421)
Q Consensus 187 ~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 266 (421)
++++|+||||..++ +++|.++|+++|+++++|++|+.... ...+..++. .+++.|++|.++.+| +||+
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence 99999999999965 77889999999999999999976321 223333332 267788999887666 8999
Q ss_pred EeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 267 VTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
++++ ++.+.+.... ...++++.....++.++++...+..+++..++.+++
T Consensus 230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 9853 3444442211 012356666777777777653345566778888999
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF 396 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~ 396 (421)
++++.+.|+++|++.+. .+..+.++++.++.. +..++... |.++||.+++|..+. .++++|+|+
T Consensus 302 ~~~l~~~l~~l~g~~~~-~~~~~~i~~~~~~~~------~~~~l~~~-L~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~ 373 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSF-RCPGSSLLAFDFAGV------HHSDLAAL-LAESGIALRAGQHCAQPLMAALGVSGTLRASF 373 (398)
T ss_pred HHHHHHHHhcCCCeEEe-CCCCCcEEEEEeCCc------CHHHHHHH-HHhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence 99999999998888733 333344565555421 35566655 467899999988653 357999999
Q ss_pred c--CCHHHHHHHHHHHHHHHHHh
Q 014631 397 A--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+ ++++|++++++.|+++++++
T Consensus 374 ~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 374 APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred eccCCHHHHHHHHHHHHHHHHHh
Confidence 8 89999999999999988764
No 111
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=2e-33 Score=271.52 Aligned_cols=349 Identities=16% Similarity=0.149 Sum_probs=254.3
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|++++||+.+++ +++..++.+++++.+++++... ..|++..++.+|+++++++++ .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4788999998873 3466799999999999987221 146666778999999999984 35788888
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCc-eEEEEeCCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENT-VAMVIVNPG 192 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~-~~i~~~~p~ 192 (421)
+|++ ++..++++++++||.|++....|.++...+...|.+++.+++++.+++..+++++++.. .+++ ++|++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 8877 57888999999999999998888887788888899999888754333333344433322 1234 567777778
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
+++|.+.+ +++|+++|++||+++|+||+|+.+.++ |.+......+...+..++++||||.|++.| ||++++
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~- 328 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGS- 328 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcC-
Confidence 99999977 789999999999999999999976665 333222222222345588899999998888 999985
Q ss_pred CCcchhHHHHHHHHhhhcc-cccC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 271 PSGILQELRIVDSIKGYLN-ISSG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+++++.+..... .+++ .++..+.++.++|+.. +. ..+..++++++++++.+.|++++|+. +..+.++
T Consensus 329 -------~~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l-~~-~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s 398 (481)
T PLN02822 329 -------ARVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL-ED-NPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS 398 (481)
T ss_pred -------HHHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH-Hh-CHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence 356666654332 2223 3466777777777642 22 25678899999999999999877887 4466778
Q ss_pred eEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCC--CCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 348 MFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMA--VGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~--~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+++++.++........+ ..+++.++++++||.+.|+.. |+. +..+|++++ +++++|++++++|++++.+.
T Consensus 399 pi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~~ 478 (481)
T PLN02822 399 PIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAASV 478 (481)
T ss_pred CEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHHH
Confidence 89988886420000001 256888888788999998743 322 357999887 89999999999999998875
Q ss_pred h
Q 014631 418 A 418 (421)
Q Consensus 418 ~ 418 (421)
.
T Consensus 479 ~ 479 (481)
T PLN02822 479 L 479 (481)
T ss_pred h
Confidence 4
No 112
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-32 Score=255.28 Aligned_cols=349 Identities=19% Similarity=0.254 Sum_probs=270.9
Q ss_pred hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC--CCCC----CCCCHHHHHHH
Q 014631 24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFD--CYSP----SVGILPARRAI 95 (421)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~--~y~~----~~g~~~l~~~i 95 (421)
...+|+.++.+++.. +.++++|+.+..+ +.|..+.+++.+...+. +.+ .+.. ...+++.|+.+
T Consensus 5 ~~~~r~~fp~l~~~~----~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~v 75 (405)
T COG0520 5 VAAVRADFPALKREV----GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAV 75 (405)
T ss_pred hHHHHhhCHHHhhcc----CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHH
Confidence 445788888877654 6788999988755 47889999999987642 221 1111 12467889999
Q ss_pred HHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHh---cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCC
Q 014631 96 ADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVL---ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 96 a~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
+++++ ++ .++|+||+|+|++++.++.++ .++||+|++....|++ |...++..|++++.+|++ ++
T Consensus 76 a~~~~------a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~ 147 (405)
T COG0520 76 ARFLN------ADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DD 147 (405)
T ss_pred HHHhC------CCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CC
Confidence 99984 56 489999999999999999998 5899999999999985 466667789999999986 34
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 247 (421)
+.++.|++++.++++|+++.+++.+|.||++ .++++|+++|+++|+++++|.+|+. +....++..++.+ +
T Consensus 148 g~~~~~~~~~~i~~~Tklvais~vSn~tG~~---~pv~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f 217 (405)
T COG0520 148 GLLDLDALEKLITPKTKLVALSHVSNVTGTV---NPVKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---F 217 (405)
T ss_pred CCcCHHHHHHhcCCCceEEEEECcccccccc---chHHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---E
Confidence 4689999999999999999999999999999 5699999999999999999999987 5566677666665 8
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-----------------------ccccCCchHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-----------------------NISSGPATFVQGAVPQ 304 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~ 304 (421)
++.|.+|+++.| ..+|+++++ +++.+.+.... ...++++.....++.+
T Consensus 218 ~afsgHKwl~gP-~GiGvLy~r--------~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~a 288 (405)
T COG0520 218 LAFSGHKWLLGP-TGIGVLYVR--------KELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAA 288 (405)
T ss_pred EEEcccccccCC-CceEEEEEc--------hHHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHH
Confidence 889999965555 238999996 35666552211 1124566667777777
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 305 IFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
+++...+..++++.++.+++.+++.+.|+++|++.+...+. .+..+.+.++.. ++.++...| .++||.++.
T Consensus 289 Al~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~------~~~dv~~~L-~~~gI~vr~ 361 (405)
T COG0520 289 ALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGI------HPHDVATLL-DEKGIAVRA 361 (405)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCC------CHHHHHHHH-HhCCeEEEe
Confidence 77765567789999999999999999999999998543332 344555556532 467776655 667899999
Q ss_pred CCCCCC--------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 383 GMAVGM--------KNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 383 g~~~~~--------~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
|..+.. ...+|+|++ ++.||++++++.|+++.+
T Consensus 362 g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 362 GHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred ccccccHHHHhcCCCCceEEEEeecCCHHHHHHHHHHHHHHhh
Confidence 987753 355999999 899999999999998764
No 113
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-33 Score=243.12 Aligned_cols=345 Identities=26% Similarity=0.446 Sum_probs=263.7
Q ss_pred HHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcC
Q 014631 64 PVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPK 140 (421)
Q Consensus 64 ~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~ 140 (421)
..+++.....++. +.+..|..++|++-+|+.+|+|+.++.|++++|++|++|+|++.|+..++..++ .+.+.|+++-
T Consensus 89 ~Dai~RA~~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPi 168 (475)
T KOG0258|consen 89 TDAIKRAKRILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPI 168 (475)
T ss_pred HHHHHHHHHHHHhcCCcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeec
Confidence 3344444444443 356689999999999999999999999999999999999999999999998875 5679999999
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
|.|+-|...+...|...+.+.++.+++|.+|.++|++.+++ ++++++++||.||||.+++.+.+++|..+|.+++
T Consensus 169 PQYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~ 248 (475)
T KOG0258|consen 169 PQYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEG 248 (475)
T ss_pred CCCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999887643 5788999999999999999999999999999999
Q ss_pred cEEEEcccccccccCCC-Ccccccc----cCC----CCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631 216 IMVISDEVYDHLTFGST-PYVRMGV----FGS----TVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIK 285 (421)
Q Consensus 216 ~~li~De~~~~~~~~~~-~~~~~~~----~~~----~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~ 285 (421)
++++.||+|.+..|... .+.++.. ++. .-.++.+.|.||.+.+ .|.|-||+-+-+-. ++..+.+.
T Consensus 249 l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~ 323 (475)
T KOG0258|consen 249 LVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIK 323 (475)
T ss_pred eEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHH
Confidence 99999999999888764 4444322 221 1235677899998755 68999998764322 34555555
Q ss_pred hhcccccCCchHHHHHHHHHhhccc---------hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 286 GYLNISSGPATFVQGAVPQIFKNTK---------EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+......+++...|........... ....+.+...++.+...+.+.++.++|+.|. .++|.||++..+..
T Consensus 324 Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~l 402 (475)
T KOG0258|consen 324 KLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISL 402 (475)
T ss_pred HHHhhhhcCCccchhhhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccC
Confidence 5544444666666666655554311 1233455677888899999999999999954 89999999887654
Q ss_pred cc--c-----cCCCChHHHHHHHHhhcCeeEEeCCCCCCCC---eEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 357 SL--L-----EGISDDMEFALQLAKEESVIVLPGMAVGMKN---WLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 357 ~~--~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~---~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
+. + .+...+.-.+.+||+..||+++||++|+... ++|.++-... + +.+++++++-.++
T Consensus 403 P~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f 470 (475)
T KOG0258|consen 403 PPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEF 470 (475)
T ss_pred CHHHHHHHHHhCCCCcHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHH
Confidence 32 1 1222355567889999999999999998742 5888875333 3 6666666655443
No 114
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=5e-33 Score=245.39 Aligned_cols=370 Identities=21% Similarity=0.226 Sum_probs=282.5
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCC-CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAF-PCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~-~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
++++..++++|.++...|+++. .+..|||++|.-... .-.|.-+.|++|-...........|-+..|.+++.+.+
T Consensus 3 ~~i~~~p~DpIlgL~e~f~~D~----R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~ 78 (396)
T COG1448 3 EKIEAAPADPILGLKEAFKADP----RPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAV 78 (396)
T ss_pred cccccCCCCchhHHHHHHhcCC----CcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHH
Confidence 4577778999999999999766 688999999963322 22566778888777777776677899999999999999
Q ss_pred HHHHhhhCCCC---CCCCcE--EEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc
Q 014631 96 ADYLNSELPCK---LSPDDV--YLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW 168 (421)
Q Consensus 96 a~~l~~~~~~~---~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (421)
++++ ||.+ ...+++ +=|.|||.|+.+....+. .+..+|++++|+|.++..+....|.++..+|.-+..+.
T Consensus 79 ~~ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~ 155 (396)
T COG1448 79 QKLL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETK 155 (396)
T ss_pred HHHh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccc
Confidence 9999 5533 344455 457999999999998874 46678999999999999999999999999987666666
Q ss_pred cCCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC-ccccccc-CCC
Q 014631 169 EVDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVF-GST 243 (421)
Q Consensus 169 ~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~-~~~ 243 (421)
.+|.+.+.+.+. ++..+++...+|||||..++.++|++|+++.++.|++.++|-+|.+|.-+.+. ...+..+ ...
T Consensus 156 ~~df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~ 235 (396)
T COG1448 156 GLDFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVG 235 (396)
T ss_pred cccHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhC
Confidence 789999877664 34445555666999999999999999999999999999999999998744221 1112211 222
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHH
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKI 317 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~ 317 (421)
..++++.||||.|++.|.|+|.+.+-.++... ...+..+++... ..+++|+......+...|++.. +..+..+
T Consensus 236 ~~~lva~S~SKnfgLYgERVGa~~vva~~~~~-a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~M 314 (396)
T COG1448 236 PELLVASSFSKNFGLYGERVGALSVVAEDAEE-ADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEM 314 (396)
T ss_pred CcEEEEehhhhhhhhhhhccceeEEEeCCHHH-HHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 33788999999999999999996664332111 123444444443 3567888888888888898633 2445667
Q ss_pred HHHHHHHHHHHHHHhhcC-C--CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 318 VDILRDTADICYDRIKEI-P--CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
++++.++|..+.+.|++. + .+. ....+.|||.+..+ +.+.+.+|.++++|++..+. ||
T Consensus 315 r~Ri~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gl----------s~~QV~rLree~~IY~v~sG--------Ri 375 (396)
T COG1448 315 RQRILEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGL----------SPEQVDRLREEFGIYLVASG--------RI 375 (396)
T ss_pred HHHHHHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCC----------CHHHHHHHHHhccEEEecCC--------ee
Confidence 888999999999999873 2 366 33677899988655 45667888899999998643 99
Q ss_pred Eec-CCHHHHHHHHHHHHHH
Q 014631 395 TFA-IEPSALEEGLGRIKAF 413 (421)
Q Consensus 395 ~~~-~~~e~l~~~~~~l~~~ 413 (421)
|++ .++.+++.++++|.++
T Consensus 376 ~vaGl~~~ni~~va~ai~~v 395 (396)
T COG1448 376 NVAGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred eeccCChhhHHHHHHHHHhh
Confidence 998 8999999999999876
No 115
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=6e-32 Score=258.93 Aligned_cols=332 Identities=15% Similarity=0.189 Sum_probs=244.7
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-C-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-P-------SVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.++++|+.+..+ +.++.+.+++.+.+.....+... . ...+.++|+.++++++. .++++|++|
T Consensus 22 ~~~iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~-----~~~~~v~~t 91 (406)
T PRK09295 22 LPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINA-----RSAEELVFV 91 (406)
T ss_pred CceEEEeCcccc-----cCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCc-----CCCCeEEEe
Confidence 468999999855 67888999999888642111111 1 11246788888888742 257899999
Q ss_pred CCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631 116 AGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 116 ~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~ 187 (421)
+|++++++.++.++ .++||+|++++++|++ +...++..|++++.++.++ ++.+|++++++.+++++++++
T Consensus 92 ~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~ 169 (406)
T PRK09295 92 RGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLLA 169 (406)
T ss_pred CCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEEE
Confidence 99999999998864 5799999999998875 3555677899999998753 345899999999988999999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+++|+||||.++| +++|.++|+++|+++++|++|+.. ....++..++. .+++.|++|.+|.+| +||++
T Consensus 170 l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g----~~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~ 237 (406)
T PRK09295 170 ITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVM----HHPVDVQALDC---DFYVFSGHKLYGPTG--IGILY 237 (406)
T ss_pred EecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccC----ccccCchhcCC---CEEEeehhhccCCCC--cEEEE
Confidence 9999999999976 788889999999999999999763 22333433333 377889999877666 79999
Q ss_pred eeCCCcchhHHHHHHHHhh-----------------------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 268 TSDPSGILQELRIVDSIKG-----------------------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
+++ ++.+.+.. .+...++++.....++.++++...+.+++.+.++.+++
T Consensus 238 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l 309 (406)
T PRK09295 238 VKE--------ALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNL 309 (406)
T ss_pred Ech--------HhHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 863 23332211 01123467788888888888764445678888899999
Q ss_pred HHHHHHHhhcCCCccccCCCC-ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEE
Q 014631 325 ADICYDRIKEIPCITCPRKPE-GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRIT 395 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~ 395 (421)
++++.+.|++++++.+. .|. .+..+.+.++.. +..++.. .+.++||.++.|..+. .++.+|+|
T Consensus 310 ~~~l~~~l~~~~~~~~~-~~~~~~~iv~~~~~~~------~~~~~~~-~L~~~gI~v~~g~~c~~~~~~~~~~~~~iRiS 381 (406)
T PRK09295 310 MHYALSQLESVPDLTLY-GPQNRLGVIAFNLGKH------HAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMCRAS 381 (406)
T ss_pred HHHHHHHHhcCCCEEEe-CCCCCceEEEEEECCc------CHHHHHH-HHHhCCeEEeccccchHHHHHHHCCCCEEEEE
Confidence 99999999998888743 442 122344444421 3555555 4578899999987553 24689999
Q ss_pred ec--CCHHHHHHHHHHHHHHHH
Q 014631 396 FA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 396 ~~--~~~e~l~~~~~~l~~~~~ 415 (421)
++ ++++|++++++.|+++..
T Consensus 382 ~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 382 LAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred ccCCCCHHHHHHHHHHHHHHHH
Confidence 98 899999999999988754
No 116
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=100.00 E-value=7.3e-32 Score=259.63 Aligned_cols=337 Identities=15% Similarity=0.220 Sum_probs=247.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--C---CCC---CCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--C---YSP---SVGILPARRAIADYLNSELPCKL-SPDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~---y~~---~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~ 113 (421)
+.++++|+.+.+. +.|+.+.+++.+.+...... . |.. ...+.++|+.++++++ + ++++|+
T Consensus 30 ~~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~------~~~~~~v~ 98 (424)
T PLN02855 30 GSKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFIN------ASTSREIV 98 (424)
T ss_pred CCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcC------CCCCCEEE
Confidence 4578999998855 67788999998887642111 1 111 1124688889999884 4 357999
Q ss_pred EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
+|+|+|++++.+++.+ +++||+|+++++.|++ +...++..|.+++.++++.+ +.+|++++++.+++++++
T Consensus 99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l 176 (424)
T PLN02855 99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL 176 (424)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence 9999999999998863 5789999999998875 34556778999999987543 348999999999889999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
+++++|+||||..+| +++|.++|+++|+++++|++|+. |....++..++. .+++.|++|.+|.+| +||
T Consensus 177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~ 244 (424)
T PLN02855 177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGA---DFLVASSHKMCGPTG--IGF 244 (424)
T ss_pred EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence 999999999999987 67888999999999999999965 322233333332 377899999876556 899
Q ss_pred EEeeCCCcchhHHHHHHHHhhh----------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 266 LVTSDPSGILQELRIVDSIKGY----------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
+++++ ++.+.+... +...++++.....++.++++...+.+++++.++..+
T Consensus 245 l~~~~--------~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 316 (424)
T PLN02855 245 LWGKS--------DLLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE 316 (424)
T ss_pred EEEch--------hhhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 99863 233333211 011235666777777777765445678888999999
Q ss_pred HHHHHHHHhhcCCCccccCCCC------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCC
Q 014631 324 TADICYDRIKEIPCITCPRKPE------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMK 389 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~ 389 (421)
+++++++.|++++++.+. .+. .+.++.+.++.. +..++...|.+++||.+..|..+ +.+
T Consensus 317 l~~~l~~~L~~~~g~~i~-~~~~~~~~~r~~~v~~~~~~~------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~ 389 (424)
T PLN02855 317 LGTYLYEKLSSVPGVRIY-GPKPSEGVGRAALCAFNVEGI------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVN 389 (424)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCcccccCcccEEEEEECCc------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCC
Confidence 999999999988888743 332 134555566521 35566666644459999988754 234
Q ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.++|+|++ ++++|++++++.|++++..++.
T Consensus 390 ~~iRiS~~~ynt~~di~~l~~~l~~~~~~~~~ 421 (424)
T PLN02855 390 ASARASLYFYNTKEEVDAFIHALKDTIAFFSS 421 (424)
T ss_pred CeEEEEeccCCCHHHHHHHHHHHHHHHHHHHh
Confidence 68999998 8999999999999999877653
No 117
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=6.9e-32 Score=250.41 Aligned_cols=308 Identities=15% Similarity=0.159 Sum_probs=226.9
Q ss_pred CCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 58 PCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 58 ~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
.++..+|.++++..+.++... +...-+.+|++.+|+|+ +.+++++++++|+++++..++.++.++||+|+
T Consensus 30 lgl~~~~~~~~~~~~~~~~~~----g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl 99 (346)
T TIGR03576 30 TGLAGGFKIDEEDLELLETYV----GPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV 99 (346)
T ss_pred ccCCCChhHHHHHHHHHHHhc----CCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 335567888988888877631 22233567777777776 35789999999999999999999999999999
Q ss_pred Ec---CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LP---KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
++ .|+|.++...++..|+++..+ .++++++. .+++++|+++ +++++|.+++.+++++|+++|+++
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~ 167 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK 167 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc
Confidence 74 579999999999999875322 14455433 2456766664 578999999999999999999999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccC
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSG 293 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 293 (421)
|+++|+||+|+.+..+.....+....+. .++++||||. ++|+|+||++++ +++++.+...... ..+
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~--------~~li~~l~~~~~~~~~s 234 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGR--------KELVDKIKSVGEQFGLE 234 (346)
T ss_pred CCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeC--------HHHHHHHHHhhcCcccC
Confidence 9999999999986532111112122221 2667799994 789999999986 4677877776543 234
Q ss_pred CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHH
Q 014631 294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA 373 (421)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 373 (421)
.+++.+.++.++|+... .+..++.++++++.+.+.++++ . + .|..+.|+|++++.. ++.+++.+++
T Consensus 235 ~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~~------~~~~~~~~ll 300 (346)
T TIGR03576 235 AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEEE------KLIEIGLDLL 300 (346)
T ss_pred ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCCC------CHHHHHHHHH
Confidence 67788888888886422 3566778888888888888753 3 2 233344899888631 3567888999
Q ss_pred hhcCeeEEeCCCCC-CCCeEEEEecCCHH---HHHHHHHHHHHHH
Q 014631 374 KEESVIVLPGMAVG-MKNWLRITFAIEPS---ALEEGLGRIKAFC 414 (421)
Q Consensus 374 ~~~gv~v~~g~~~~-~~~~iRi~~~~~~e---~l~~~~~~l~~~~ 414 (421)
+++||.++||..|. .++++|||++.+++ +.+.+++.|++.+
T Consensus 301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 99999999998874 47899999997665 7899999987754
No 118
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=1.4e-31 Score=256.65 Aligned_cols=334 Identities=17% Similarity=0.219 Sum_probs=244.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CC--CC----CCCCCHHHHHHHHHHHhhhCCCCCC-CCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DC--YS----PSVGILPARRAIADYLNSELPCKLS-PDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~--y~----~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~ 113 (421)
+.++++|++|... +.|+.+.+++.+.+..... +. +. ....++++|+.++++++ .+ +++|+
T Consensus 16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~------~~~~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFIN------AASDEEIV 84 (403)
T ss_pred CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------cCCCCeEE
Confidence 6688999999855 5678899999887764211 10 10 01235688899999884 44 67999
Q ss_pred EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
+|+|++++++.++.++ .++||+|+++++.|++. ...+...|.+++.++.+ .++.+|++++++.+.+++++
T Consensus 85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l 162 (403)
T TIGR01979 85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL 162 (403)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence 9999999999998875 57899999999988764 34556789999999875 34568999999999889999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
+++++|+||||..++ +++|.++|+++|+++|+|++|+.. .....+..++ ..+++.|++|.+|.+| +|+
T Consensus 163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g----~~~~~~~~~~---~d~~~~s~~K~~gp~G--~g~ 230 (403)
T TIGR01979 163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVP----HMPVDVQALD---CDFYVFSGHKMYGPTG--IGV 230 (403)
T ss_pred EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcC----ccccCccccC---CCEEEEecccccCCCC--ceE
Confidence 999999999999976 788899999999999999999763 2222333332 3488889999987666 899
Q ss_pred EEeeCCCcchhHHHHHHHHhhhc----------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 266 LVTSDPSGILQELRIVDSIKGYL----------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
+++++ ++.+.+.... ...++++.....++.++++...+.+.++..++..+
T Consensus 231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 98853 3334332110 01135666667777777764333456778889999
Q ss_pred HHHHHHHHhhcCCCccccCCCCc----eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC--------CCCCCe
Q 014631 324 TADICYDRIKEIPCITCPRKPEG----SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA--------VGMKNW 391 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~~~~~ 391 (421)
+++.+.+.|++++++.+. .|.. +.++.+.++.. +..++.. .++++||.+.+|.. ++.+++
T Consensus 303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~~------~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~ 374 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEGV------HPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPAT 374 (403)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCCc------CHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence 999999999988888743 4431 33555555421 3445554 55788999998763 334678
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|+|++ ++++|++++++.|+++++.+
T Consensus 375 iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 375 CRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 999998 78999999999999887754
No 119
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=1.9e-31 Score=254.86 Aligned_cols=331 Identities=17% Similarity=0.166 Sum_probs=236.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CC----HHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---GI----LPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~----~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
.|+++|||+.|++ ++++.+|.+++++.+.+.+.. ..|+++. |. .++|+++|++++ .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~-~~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHG-FGMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhC-CCCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 4789999999973 356788999999999987632 2565555 65 789999999984 246777
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEE
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVI 188 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~ 188 (421)
++|+++|+..++.+++++||.|++++|+|+++...++..+.+...++ ..|++++++.+++ ++++|++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 78899999999999999999999999999999888888777664442 2588899887764 6677777
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccCCCCCEEEEcccccccCCCCceEEEE
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWL 266 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 266 (421)
.+++||||.+. ++++|+++|++||+++|+||+|+....+. .+........ .+..++++|+||++ +|+|+||+
T Consensus 177 ~~v~~~tG~~~---~l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~ 250 (393)
T TIGR01822 177 DGVFSMDGVIA---PLDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT 250 (393)
T ss_pred eCCccCCCCcC---CHHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence 78899999995 48999999999999999999996433221 1111111221 13458889999985 46799999
Q ss_pred EeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631 267 VTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 343 (421)
+++ +++.+.+.... . ...+.++..+.++.++++.. ...++.+++++++++++.+.|++. |+. +..
T Consensus 251 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 318 (393)
T TIGR01822 251 TAR--------KEVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFD-IKP 318 (393)
T ss_pred EeC--------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCC
Confidence 885 34666665432 1 22233445555556666431 234567788999999999999876 777 323
Q ss_pred CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+. +.++.+.++.. .+..+++..|+ ++||.+. +..|. ....+|++++ ++++++++++++|+++.+++
T Consensus 319 ~~-~~~~~i~~~~~-----~~~~~l~~~L~-~~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 319 AD-HPIIPVMLYDA-----VLAQRFARRLL-EEGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CC-CCEEEEEeCCH-----HHHHHHHHHHH-HCCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 33 33444444321 13566777765 4599987 44442 1246999987 78999999999999987754
No 120
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=6.8e-31 Score=251.72 Aligned_cols=337 Identities=16% Similarity=0.111 Sum_probs=238.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|+++|||+.|++ ++++.++.+.+++.+.+..... ..|....|..++++.+++++.+.+|. +++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence 4788999999873 3467889999999998876321 12223467889999999999887772 367888877 7
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCC
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGN 193 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~n 193 (421)
+++..++.+++++||.|++++|+|+++...+...|.+++.++. .|++++++.+++ ++++++..+.+|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888889999999999999999999998888888988777653 377888776653 456666556789
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
++|.. +++++|.++|++||+++|+||+|+...+. +........+. .+..++++|+||+++ |.|+||++++
T Consensus 186 ~~G~~---~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~~--g~r~G~v~~~-- 257 (397)
T PRK06939 186 MDGDI---APLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKALG--GASGGYTAGR-- 257 (397)
T ss_pred CCCCc---CCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHhC--ccCceEEEeC--
Confidence 99986 67999999999999999999999642222 22111221222 134588999999973 5689999986
Q ss_pred CcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 272 SGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
+++++.+..... ...++++..+.++.++++... ..++.+++++++++.+.+.|+++ ++. ...+.+++
T Consensus 258 ------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~ 327 (397)
T PRK06939 258 ------KEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLE--ESDELRDRLWENARYFREGMTAA-GFT-LGPGEHPI 327 (397)
T ss_pred ------HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCCE
Confidence 346666654322 122334444555555554321 13567788999999999999887 666 33455544
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+ ++.++.. .++.+++..+++ +||.+.++.+.. ...++|++++ ++++++++++++|+++++++
T Consensus 328 ~-~~~~~~~-----~~~~~~~~~L~~-~gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 328 I-PVMLGDA-----KLAQEFADRLLE-EGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred E-EEEECCH-----HHHHHHHHHHHH-CCceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 3 3334321 135667777655 499998654322 1368999986 78999999999999998765
No 121
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=9e-31 Score=247.63 Aligned_cols=327 Identities=15% Similarity=0.152 Sum_probs=233.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|..++||+.|+| .+++.++.+++++.+++..... ..|....| ..+++++++++++ .++.|+++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 5889999999953 2346778999999998875211 11222223 3467777777763 25677777
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNP 191 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p 191 (421)
+|+++ +..++..++++||+|++++|+|..+...+...|.+++.++. +|++++++.+++ +++++++.++
T Consensus 84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 77555 44567788899999999999999999989999988877653 478888887754 3567777888
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--cccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
+|+||.. .++++|.++|+++|+++|+||+|+.+.+++.. ...+..+..++++++++||||+|+++| ||++++
T Consensus 156 ~~~~G~~---~~~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDI---APLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCC---cCHHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 9999988 45888999999999999999999876554322 122223334567899999999998766 999875
Q ss_pred CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++.+.+..... ...+.++..+.++.++++.. ....+.+++++++++++.+.|+++ ++. + .+..
T Consensus 230 --------~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~ 296 (360)
T TIGR00858 230 --------QALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPSC 296 (360)
T ss_pred --------HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCCC
Confidence 246666543322 12234555555666666532 123566789999999999999987 676 4 3556
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHH
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
++++|+.++... ++.++...+ .++||.+.++..+.. .+++|++++ ++++++++++++|+
T Consensus 297 ~~~~~~~~~~~~-----~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 297 TPIVPVIIGDNA-----SALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCEEEEEeCCHH-----HHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 778888876321 245676665 567999998765532 358999998 69999999998863
No 122
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-30 Score=249.79 Aligned_cols=339 Identities=14% Similarity=0.168 Sum_probs=237.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.+++||..|.+....+ +.+|.+.+++.+++.... +.......++++.+++++.+..+ .+++++++||++|
T Consensus 37 dg~~~iD~~~g~~~~~lG-~~~p~v~~a~~~~~~~~~---~~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~eA 108 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLG-HCHPKLVEAIQEQAAKLI---HTSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAEA 108 (396)
T ss_pred CCCEEEECCccHHhccCC-CCCHHHHHHHHHHHhhcc---ccccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHHH
Confidence 588999999987664332 346899999999987632 11122235788888888877543 4799999999999
Q ss_pred HHHHHHHhcCCC-------CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCc----cCCHHHHHhhhccCceEE
Q 014631 122 IQVILTVLARPG-------ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGW----EVDLDGLEALADENTVAM 186 (421)
Q Consensus 122 l~~~~~~l~~~g-------d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~----~~d~e~l~~~~~~~~~~i 186 (421)
+..+++.+...+ ++|++.+++|+++...+...+.... ..+.. .++ ..|++++++.+.++++++
T Consensus 109 ~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~i~~~~~~v 186 (396)
T PRK02627 109 NEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLV--EGFIYVPFNDIEALKAAITDKTAAV 186 (396)
T ss_pred HHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCC--CCceEeCCCCHHHHHHhcCCCeEEE
Confidence 999999765433 6799999999988655544432221 11111 111 128899999988788888
Q ss_pred EEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 187 VIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 187 ~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
++..++||+| ..++++.+++|.++|++||+++|+||+|+++.+.|.. ......+...+ +.||||.++ +|+|+||
T Consensus 187 ii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pd---i~t~sK~~~-~G~rig~ 261 (396)
T PRK02627 187 MLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPD---IMTLAKGLG-GGVPIGA 261 (396)
T ss_pred EEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCC---EEEEcchhh-CCcccEE
Confidence 8888899999 6789999999999999999999999999988766642 22222222222 237999987 8999999
Q ss_pred EEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631 266 LVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 343 (421)
++++ +++++.+.... ..+.+.+++.+.++.++|+... +...++.++..+..++.+.+.+.+++.+. . .
T Consensus 262 ~~~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~ 331 (396)
T PRK02627 262 VLAK--------EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-V 331 (396)
T ss_pred EEEc--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-e
Confidence 9986 35666665432 2345788899999988887532 22333333334444444444444443333 2 2
Q ss_pred CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+..|.++|++++. +..+++..+++ +||.+.|+. .+++|++++ .+++++++++++|+++++++
T Consensus 332 ~~~g~~~~i~~~~-------~~~~~~~~l~~-~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 332 RGLGLMIGIELDR-------PAAEIVKKALE-KGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred ccCcEEEEEEecC-------cHHHHHHHHHH-CCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 3357788988842 46677777654 599999864 367999875 78999999999999998764
No 123
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=4e-30 Score=245.20 Aligned_cols=338 Identities=16% Similarity=0.180 Sum_probs=240.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|++++||+.|++ ++++.++.+.+++.+++.+. ....|....|..++++.+++++.+.+|. ++.+++++|
T Consensus 30 ~~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG- 102 (385)
T TIGR01825 30 VNGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG- 102 (385)
T ss_pred ECCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-
Confidence 34789999998862 34678899999999998753 1235777789999999999999887762 456777777
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~np 194 (421)
++++..++.+++++||.|++++|.|.++...+...|.++..++ .+|++++++.+.+ +++++++.+++||
T Consensus 103 ~~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~ 175 (385)
T TIGR01825 103 FNTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSM 175 (385)
T ss_pred HHHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcC
Confidence 5566678888899999999999999998888788887776553 2677888776643 5677777777999
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
||.+.+ +++|.++|++||+++|+||+|+.+.++ +.........+ .+.++++.||||+|+++| ||++++
T Consensus 176 tG~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~--- 245 (385)
T TIGR01825 176 DGDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGH--- 245 (385)
T ss_pred CCCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecC---
Confidence 999855 788999999999999999999876554 22111111222 346788999999997766 998874
Q ss_pred cchhHHHHHHHHhhhcc--c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 273 GILQELRIVDSIKGYLN--I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
+++.+.+..... . ....++..+.++.++++...+ ..+..++++++++++.+.|+++ |+. +..|.+. +
T Consensus 246 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~ 315 (385)
T TIGR01825 246 -----KELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-I 315 (385)
T ss_pred -----HHHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-E
Confidence 346666654322 1 223456667777777753211 1245667778899999999886 777 4345544 4
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+++.++.. .+..+++..++++ ||.+.++.... ....+|++++ ++++++++++++|+++++++.
T Consensus 316 ~~~~~~~~-----~~~~~~~~~L~~~-gi~v~~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 383 (385)
T TIGR01825 316 TPVVIGDE-----KAAQEFSRRLFDE-GIFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 383 (385)
T ss_pred EEEEECCH-----HHHHHHHHHHHHC-CcEEcccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 44444321 1245677776555 99885432222 1367999886 899999999999999987643
No 124
>PLN02483 serine palmitoyltransferase
Probab=100.00 E-value=3.1e-30 Score=249.85 Aligned_cols=335 Identities=15% Similarity=0.127 Sum_probs=229.8
Q ss_pred CCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 43 PRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSA------EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
+++.+||++.+ +.++. .++...+++.+++++. .-..|+...++.++|+.+|++++ .++.|+++
T Consensus 99 ~~~~~n~~s~~---YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g-------~~~ai~~~ 168 (489)
T PLN02483 99 TRRCLNLGSYN---YLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFVG-------KPAAIVFG 168 (489)
T ss_pred CceEEEeecCC---ccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhC-------CCcEEEEC
Confidence 56778888776 44444 2333444444444331 12247777788999999999994 35677776
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cC-----c
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------EN-----T 183 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~-----~ 183 (421)
+| ..++..++.+++++||.|++++++|.++...++..|++++.++.+ |++++++.++ ++ .
T Consensus 169 ~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 169 MG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred CH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 65 445557777889999999999999999999999999999998853 3444444332 22 2
Q ss_pred eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 184 VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 184 ~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
++++++++ .|++|.+ .++++|+++|++||+++|+||+|+....+ |.+...+...+..+..|+++||||+|++.|
T Consensus 241 k~livve~v~s~~G~~---~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G 317 (489)
T PLN02483 241 KIIVIVEGIYSMEGEL---CKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG 317 (489)
T ss_pred eEEEEECCCCCCCCcc---cCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc
Confidence 55666666 5899999 56999999999999999999999854332 322233333344455688999999998877
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhc----cchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKN----TKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
||++++ +++++.+..... ...+.++....++.++|+. .......+.+++++++++++.+.|+
T Consensus 318 ---G~i~~~--------~~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~ 386 (489)
T PLN02483 318 ---GYIAGS--------KELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ 386 (489)
T ss_pred ---eEEEcC--------HHHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence 999875 467777776532 1222333333334444431 1123445567889999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLG 408 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~ 408 (421)
++ |+. +..+.+++..|+.+.... +..++..+|+ ++||.+.+..++.. .+.+|++++ +++|+|+++++
T Consensus 387 ~~-G~~-v~~~~~sp~~~l~l~~~~-----~~~~~~~~Ll-~~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~ 458 (489)
T PLN02483 387 KM-GFE-VLGDNDSPVMPIMLYNPA-----KIPAFSRECL-KQNVAVVVVGFPATPLLLARARICISASHSREDLIKALE 458 (489)
T ss_pred HC-CCc-ccCCCCCCEEEEEECCHH-----HHHHHHHHHH-HCCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 88 776 435555666666554221 2346777665 56999997333222 367999997 79999999999
Q ss_pred HHHHHHHHh
Q 014631 409 RIKAFCQRH 417 (421)
Q Consensus 409 ~l~~~~~~~ 417 (421)
+|.++++.+
T Consensus 459 ~L~~~~~~~ 467 (489)
T PLN02483 459 VISEVGDLV 467 (489)
T ss_pred HHHHHHHHh
Confidence 999988764
No 125
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=2.7e-30 Score=247.64 Aligned_cols=333 Identities=17% Similarity=0.177 Sum_probs=230.1
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
++++++|+..+ +.++..+|.+++++.++++.... ..|+....+.+|++.++++++ .++.+++++
T Consensus 45 ~~~~~~~~sn~---yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g-------~~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSND---YLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHG-------KESALLFTS 114 (410)
T ss_pred CceEEEEECCC---ccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhC-------CCCEEEECc
Confidence 45678888866 45577899999999998876321 123333235789999999873 245666666
Q ss_pred CHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeC
Q 014631 117 GCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~ 190 (421)
| ++++..++..+. .+||.|+++...|.++...+...|.++..++.+ |.+.+++.+ .+++++|++++
T Consensus 115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~-------d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRHN-------DLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhccCCCCEEEEEeC
Confidence 5 567777777664 488988888878888877888889887666431 333444433 34788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
|+||||.+++ +++|.++|++||+++|+||+|+...++..+.......+..++ .++++||||.|+++| ||++++
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~ 260 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS 260 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence 9999999976 888889999999999999999954443221111111111112 377899999999888 898874
Q ss_pred CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++++.+..... .+.+.+++.+.++.++|+... .....+++++++++++.+.|+++ |+. +..+.
T Consensus 261 --------~~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~- 327 (410)
T PRK13392 261 --------ADLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHLK--TSQTERDAHQDRVAALKAKLNAN-GIP-VMPSP- 327 (410)
T ss_pred --------HHHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC-
Confidence 356666655442 233455677888878886422 22345577889999999999987 777 43444
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+.++.+.++.. ....++..+|++++||.+.++..+.. ..++|++++ +++++++++++.|.++++++
T Consensus 328 ~~~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 328 SHIVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 44444444321 02456777776778999998754432 368999997 89999999999999988764
No 126
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=5.5e-30 Score=244.47 Aligned_cols=334 Identities=17% Similarity=0.157 Sum_probs=229.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|.++|||+.|.+ +++++++.+++++.+++.... ...|....|...+++.+++.+.+.++ .++.++++ +++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~~~i~~~-~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AERALLFS-SGY 109 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CCcEEEEC-cHH
Confidence 5899999999862 345577899999999987521 11222233444444444444444444 24445555 555
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC---ceEEEEeCCCCCcc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN---TVAMVIVNPGNPCG 196 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~nptG 196 (421)
+++..++..++++||.|++++|.|..+...+...|.+++.++. .|++.+++.+++. +.++++.+++|++|
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 6666677888899999999999999998888888988887763 3788888877542 44455556789999
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI 274 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 274 (421)
.. .++++|.++|++||+++|+||+|+.+.++ |........++..++++++.|+||+|+.+| ||++++
T Consensus 183 ~~---~~l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~----- 251 (385)
T PRK05958 183 DL---APLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGS----- 251 (385)
T ss_pred Cc---CCHHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcC-----
Confidence 88 55899999999999999999999765443 222222223344456799999999998776 888775
Q ss_pred hhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631 275 LQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351 (421)
Q Consensus 275 ~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 351 (421)
+++.+.+.... . ...++++..+.++.++++.... . .+..+++.++++++.+.|+++ ++. +..+. +.+++
T Consensus 252 ---~~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~-~-~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~ 323 (385)
T PRK05958 252 ---ETLIDYLINRARPFIFTTALPPAQAAAARAALRILRR-E-PERRERLAALIARLRAGLRAL-GFQ-LMDSQ-SAIQP 323 (385)
T ss_pred ---HHHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc-C-HHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-CCEEE
Confidence 24555554322 1 1234555665666666754221 1 566788899999999999987 676 43444 55777
Q ss_pred EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
+.++.. .++.++...+ .++||.+.++..+. .++++|++++ ++++++++++++|.+++
T Consensus 324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 777532 1345677766 56799999855432 2468999998 69999999999998753
No 127
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=9.8e-31 Score=235.80 Aligned_cols=338 Identities=17% Similarity=0.178 Sum_probs=254.7
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-----EFDCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|+|+...++ |..+++.++|...+... ..+.|+ ....+++.|+.||+.+ ++++++|+||+|+
T Consensus 2 miYlD~~ATT-----p~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~ 70 (386)
T COG1104 2 MIYLDNAATT-----PVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGA 70 (386)
T ss_pred cccccccccC-----CCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCC
Confidence 3667777655 77899999999988762 123333 1234678899999998 5788999999999
Q ss_pred HHHHHHHHHHh--c----CCCCeEEEcCCCCcchHHHHhhc---CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631 119 KQAIQVILTVL--A----RPGANILLPKPGFPLYEANARHT---RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189 (421)
Q Consensus 119 ~~al~~~~~~l--~----~~gd~Vl~~~p~y~~~~~~~~~~---g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~ 189 (421)
||+.++++... . +.|.+|+++.-.|++....++.+ |.++.+++++. ++.+|+|+|++++++++.+|.+.
T Consensus 71 TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim 148 (386)
T COG1104 71 TESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIM 148 (386)
T ss_pred cHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEE
Confidence 99999999873 2 25789999999999987777666 99999999865 44699999999999999999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
..||.+|++ +++++|.++|+++++++++|.+++. |.-+.++..+..+ +...|-||..|..| +|+++++
T Consensus 149 ~aNnE~G~I---QpI~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~ 216 (386)
T COG1104 149 HANNETGTI---QPIAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVR 216 (386)
T ss_pred ecccCeeec---ccHHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEEC
Confidence 999999999 6799999999999999999999987 6555555554432 44558889988888 7999874
Q ss_pred CCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC-CCccccCCCCc-
Q 014631 270 DPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-PCITCPRKPEG- 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~~~~- 346 (421)
+..... .++..-.+. ....++.|.+...+..++++. ....++....++..+++.+.+.|.+. |.+.+...+..
T Consensus 217 ~~~~~~---p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~r 292 (386)
T COG1104 217 PGVRLE---PLIHGGGQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPR 292 (386)
T ss_pred CCCccC---ceeccCcCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccC
Confidence 321110 111111111 123457788888888888874 45667888889999999999999975 77763222212
Q ss_pred -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631 347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE 404 (421)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~ 404 (421)
...+.+.|+.- ..+.++. .+..+||.+..|+.|.. ++.+|+|++ ++++|++
T Consensus 293 lP~~~~~~f~gv------~gE~ll~-~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~ 365 (386)
T COG1104 293 LPNILNFSFPGV------EGESLLL-ALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEID 365 (386)
T ss_pred CCCeEEEEeCCC------cHHHHHH-hccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHH
Confidence 23444555532 3455544 45888999999998843 368999998 7899999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
.+++.|.+++++++.
T Consensus 366 ~~~~~l~~~i~~lr~ 380 (386)
T COG1104 366 AAAEALKEIIKRLRE 380 (386)
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999998865
No 128
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=100.00 E-value=2.6e-30 Score=243.89 Aligned_cols=319 Identities=16% Similarity=0.134 Sum_probs=227.2
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
.+.++.+.+++.+.+.. ..|... .-..++++.+++++ | +++ +.+++++|+++++..++.++.++||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~----g--~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF----Q--TENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh----c--CCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 36778888888654321 223211 11346666666666 3 433 4578899999999999999999999999
Q ss_pred EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
++.++|++ +...++..|++++.++.++ ++.+|++++++.+++ +++++++++|+||+|.+++ +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99988876 4677788999999998754 356899999999887 8899999999999999966 77788889999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh---hc---
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG---YL--- 288 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~~--- 288 (421)
|+++++|++|+. |....++...+. .+++.|++|+|+.| .++||+++++ ++++.+.. ..
T Consensus 154 ~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 154 DALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY 217 (356)
T ss_pred CCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence 999999999874 222222222222 25677899998754 3589999863 34444432 00
Q ss_pred --------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEE
Q 014631 289 --------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMV 352 (421)
Q Consensus 289 --------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~ 352 (421)
...++++...+.++.++++......+++..++.+++++++.+.|.++ |+.....+. .+.+.|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 296 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV 296 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence 11234555556666666665344567788888999999999999987 776332222 2344566
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
.++.. .+..+++..|.+++||.+.+|..+..++++|++++ ++++++++++++|++++
T Consensus 297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~ 355 (356)
T cd06451 297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEAL 355 (356)
T ss_pred ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 66532 14567777664444999999876655679999997 78999999999999876
No 129
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.3e-29 Score=241.38 Aligned_cols=339 Identities=14% Similarity=0.164 Sum_probs=227.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|....+.+. .+|.+.+++.+++++... .+.. ...+....+++.+.+.. ..+++++++||++
T Consensus 28 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~la~~l~~~~----~~~~v~~~~sGse 99 (389)
T PRK01278 28 EDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSNL-YRIPEQERLAERLVENS----FADKVFFTNSGAE 99 (389)
T ss_pred CCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--cccc-cCChHHHHHHHHHHhhC----CCCEEEEcCCcHH
Confidence 34889999988765444443 789999999999886211 1111 11233334444443322 2468999999999
Q ss_pred HHHHHHHHh----cCCCC----eEEEcCCCCcchHHHHhhcCceeEeeec-cC-CCCcc----CCHHHHHhhhccCceEE
Q 014631 121 AIQVILTVL----ARPGA----NILLPKPGFPLYEANARHTRLEIRHFDL-LP-EKGWE----VDLDGLEALADENTVAM 186 (421)
Q Consensus 121 al~~~~~~l----~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~d~e~l~~~~~~~~~~i 186 (421)
|+..+++++ ..+|| +|++.+++|+++...+...+........ .+ ..++. .|++++++.+++++++|
T Consensus 100 A~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~av 179 (389)
T PRK01278 100 AVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAI 179 (389)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEE
Confidence 999998876 34565 8999999999987766655543222210 00 11111 48999999988778888
Q ss_pred EEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 187 VIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 187 ~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
++..++|++| ..+|.+++++|.++|++||+++|+||+|+++.+.|..+ .....+.... +.||||.++ +|+|+||
T Consensus 180 ivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~ 254 (389)
T PRK01278 180 LIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLF-AHEWAGVTPD---IMAVAKGIG-GGFPLGA 254 (389)
T ss_pred EEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcce-eecccCCCCC---EEEEehhcc-CCcceEE
Confidence 7776688888 78899999999999999999999999999887766532 2112222212 348999975 8999999
Q ss_pred EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh----hcCCCccc
Q 014631 266 LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI----KEIPCITC 340 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~~g~~~ 340 (421)
+++++ ++++.+..... .+.+.+++.+.++.++|+...+.. ..++++++.+.+.+.| ++.+++..
T Consensus 255 ~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~ 323 (389)
T PRK01278 255 CLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIE 323 (389)
T ss_pred EEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 99863 46666654432 345788899999888886422211 1222223333333333 23332211
Q ss_pred cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
...+ .|.+++++++. +..+++.++++ +||.+.|+. .+++|++++ .+++++++++++|.+++++
T Consensus 324 ~v~g-~G~~~~i~~~~-------~~~~~~~~l~~-~GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 324 EVRG-KGLLLGLKCVV-------PNRDLVQALRD-EGLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred eEec-ccEEEEEEEec-------CHHHHHHHHHH-CCeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 2133 46777877742 35677777755 599999974 478999976 7899999999999998865
No 130
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=100.00 E-value=5.8e-30 Score=245.04 Aligned_cols=324 Identities=16% Similarity=0.164 Sum_probs=229.0
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
+++|+.+.+. ++|+.+++++.+.+..... ..|....+ +.++|+.++++++ +++++|++++|+
T Consensus 18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~------~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLN------ADPPEVVFGANA 86 (397)
T ss_pred eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcC------CCCCeEEEeCCH
Confidence 6899988866 5788899999888764321 23433322 3577777777763 455679999999
Q ss_pred HHHHHHHHHHh---cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 119 KQAIQVILTVL---ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 119 ~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
+++++.++.++ .++||+|++.+++|.+.. ..++..|++++.++.+++ ++.+|++++++.++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99999887775 579999999999997643 456778999999987642 3568999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+||||..++ +++|.++|+++|+++|+|+++.. |.....+..++. .+++.|+||++| .|+|++++++
T Consensus 166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~~---d~~~~s~~K~~g---~~~G~l~~~~- 231 (397)
T TIGR01976 166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATGA---DFLTCSAYKFFG---PHMGILWGRP- 231 (397)
T ss_pred CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcCC---CEEEEechhhcC---CceEEEEEcH-
Confidence 999999964 88899999999999999999854 322223333332 366789999963 4689999863
Q ss_pred CcchhHHHHHHHHhhhcc-----------cccCCchHHHHHHHHHhhccch--------------hHHHHHHHHHHHHHH
Q 014631 272 SGILQELRIVDSIKGYLN-----------ISSGPATFVQGAVPQIFKNTKE--------------DFFSKIVDILRDTAD 326 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~~ 326 (421)
++++.+..... ..++++.....++.++++...+ .++++..++..++++
T Consensus 232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (397)
T TIGR01976 232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE 304 (397)
T ss_pred -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence 45555443211 1124444444444444432111 135677788888999
Q ss_pred HHHHHhhcCCCccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----------CCCe
Q 014631 327 ICYDRIKEIPCITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----------MKNW 391 (421)
Q Consensus 327 ~~~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~~~~ 391 (421)
++++.|++++++.+. .+ ..+.++.+.++. .+..++..+| +++||.+..|..+. ..++
T Consensus 305 ~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~ 376 (397)
T TIGR01976 305 YLLVGLSDLPGVTLY-GVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGV 376 (397)
T ss_pred HHHHHHhcCCCEEEe-CCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCe
Confidence 999999988667733 33 134455555542 1345666655 67899999886553 2468
Q ss_pred EEEEec--CCHHHHHHHHHHH
Q 014631 392 LRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l 410 (421)
+|+|++ ++++|++++++.|
T Consensus 377 iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 377 VRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEEeeccCCHHHHHHHHHhC
Confidence 999997 8899999998864
No 131
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.98 E-value=1.8e-29 Score=238.31 Aligned_cols=346 Identities=17% Similarity=0.174 Sum_probs=247.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCc---HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTT---PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|..++.|..+++-.+ +..+ ..+.++..+++..+. ..|.+..|+.+||++++++++ .+++++|+||
T Consensus 9 ~g~n~~~l~~~~v~iD--lltds~t~ams~~~~~a~~~gd-~~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYID--LLTDSGTGAMSDYQWAAMMLGD-EAYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCC--CCCCCCcHHHHHHHHHHHHhCC-CccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence 4899999999998322 2333 355556566665554 369999999999999999984 3579999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC--------ccCCHHHHHhhhccC----ceEE
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG--------WEVDLDGLEALADEN----TVAM 186 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~--------~~~d~e~l~~~~~~~----~~~i 186 (421)
++|+.+++.++++|||.| +++|.|..+...+...|++++.++++++.+ +.+|+++|++.+.++ +++|
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 999999999999999987 689999999999999999999999865432 449999999998765 6788
Q ss_pred EEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEccccccc--cc-----CCCCcccccccCCCCCEEEEcccccccCC
Q 014631 187 VIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHL--TF-----GSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 187 ~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
++++|+||+ |.+++.+++++|.++|++||++||.|+++... .+ .|....++... ++.++|++|.+.+
T Consensus 157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei-----~~e~~s~sd~~~m 231 (431)
T cd00617 157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEI-----AREMFSYADGCTM 231 (431)
T ss_pred EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHH-----HHHhhccCCEEEE
Confidence 999999998 99999999999999999999999999996531 11 11111122111 2334566666656
Q ss_pred CCce------EEEEEeeCCCcchhHHHHHHHHhhhcc-----c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 259 PGWR------LGWLVTSDPSGILQELRIVDSIKGYLN-----I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 259 ~G~r------~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
.|++ .||+++++ +++.++++.... . .++.+.....+++..|+...+ .+...+++ ++++
T Consensus 232 S~~K~~~~~~GG~i~~~d-------~~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~ 301 (431)
T cd00617 232 SAKKDGLVNIGGFLALRD-------DELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVR 301 (431)
T ss_pred EeecCCCCccceEEEeCc-------HHHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHH
Confidence 6655 56888864 346666664321 1 122333333444435543211 22223333 3558
Q ss_pred HHHHHhhcCCCccccCCCCceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCeeEEe-CCCC-C-----------CCC
Q 014631 327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVIVLP-GMAV-G-----------MKN 390 (421)
Q Consensus 327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-~-----------~~~ 390 (421)
++.+.|.+. |+. +..|.+++++|++++... .+ ...++.+++.+|+++.||.+.- |+.. + .-.
T Consensus 302 ~l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~ 379 (431)
T cd00617 302 YLGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELE 379 (431)
T ss_pred HHHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccc
Confidence 899999988 888 448999999999876421 00 1124788998999999999653 4421 1 025
Q ss_pred eEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631 391 WLRITFA---IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 391 ~iRi~~~---~~~e~l~~~~~~l~~~~~~ 416 (421)
.+|+++. .+.+.++.+.+.|..+.++
T Consensus 380 ~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 380 LVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred eeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 7999997 6899999999999988765
No 132
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=2.1e-30 Score=215.60 Aligned_cols=331 Identities=19% Similarity=0.287 Sum_probs=249.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
|++++.++...-.. .|.|..+ + - -..|+..+ ..+++.+++.- .+..+++|+++-|+.+.+
T Consensus 40 G~~iv~ld~~e~~r---yPdP~q~-e-------f--k~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~I 99 (375)
T KOG0633|consen 40 GRDIVKLDANENPR---YPDPEQM-E-------F--KYVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDELI 99 (375)
T ss_pred CCCceEeccccCCC---CcCHHHc-c-------c--ccccCCcc-cchhhhhcccC------CCCCccceEEecCcHHHH
Confidence 77888887665332 2333331 1 1 12344443 24555555443 267899999999999999
Q ss_pred HHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCccccc
Q 014631 123 QVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 123 ~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~ 199 (421)
.++++..+.|| ++|+...|+|+-|.-.+...+++++.+|+++ +|.+++|++.+.+.. ..|.+++++|+||||..+
T Consensus 100 D~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~i 177 (375)
T KOG0633|consen 100 DLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSII 177 (375)
T ss_pred HHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCcccc
Confidence 99999999999 8999999999999888889999999999876 688999999987753 578899999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
..+++.+|.+-- .|.++++||+|.+|. |.. ..+.-.....+++++.+|||.||++|+|+||.+.+ .+
T Consensus 178 k~~di~KiLe~p--~nglVVvDEAYidFs--g~~-S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~--------~~ 244 (375)
T KOG0633|consen 178 KEDDILKILEMP--DNGLVVVDEAYIDFS--GVE-SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFP--------LS 244 (375)
T ss_pred cHHHHHHHHhCC--CCcEEEEeeeeEeec--ccc-ccchHhHhCCceeehhhhhhhcCcceeEeeccccc--------HH
Confidence 999999998843 378999999999976 411 12223344568899999999999999999999986 35
Q ss_pred HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
+++-+.+.+.. .+.+.....++.++++...-..++..++.+.+.++++...|.++|++.....+...+|+.+++.....
T Consensus 245 ia~iln~~KaP-YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~n 323 (375)
T KOG0633|consen 245 IAEILNRAKAP-YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGDN 323 (375)
T ss_pred HHHHHHhccCC-ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCCc
Confidence 66766666654 36667777788888876556778888999999999999999999887644467777888888864310
Q ss_pred cCCCChHHHHHHHHhhcCeeEEe-CCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLP-GMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
..+...+.+++-+.||.|+- |+-.+..+++||+.+..+|. ..++..|+++
T Consensus 324 ---~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 324 ---GMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred ---HHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 12456666777889999985 44444578999999965443 4556666554
No 133
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.98 E-value=1.2e-29 Score=241.08 Aligned_cols=333 Identities=14% Similarity=0.117 Sum_probs=232.6
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---------VGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
+|+.+..+ +.++.+.+++.+.+.... .++.. ..+.++|+.+++++ ++++++|++|+|+
T Consensus 2 yld~aa~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~ 68 (379)
T TIGR03402 2 YLDNNATT-----RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGG 68 (379)
T ss_pred cCCCcCCC-----CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence 45555543 677899999998876421 22111 12446667777776 3568899999999
Q ss_pred HHHHHHHHHHhc---CCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631 119 KQAIQVILTVLA---RPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 119 ~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
+++++.++..+. .+||.|++...+|+++... +...|.+++.++.++ ++.+|++++++.++++++++++++++
T Consensus 69 t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~ 146 (379)
T TIGR03402 69 TESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWAN 146 (379)
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEccc
Confidence 999999988764 4568999999898876543 334699999888753 34689999999998899999999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
||||..+| +++|.++|+++|+++++|++|+. |....++...+.+ +++.|.+|.++.+| +|++++++..
T Consensus 147 n~tG~~~~---~~~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~v~~~~ 214 (379)
T TIGR03402 147 NETGTIFP---IEEIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNID---MLSLSGHKLHGPKG--VGALYIRKGT 214 (379)
T ss_pred CCeeeccc---HHHHHHHHHHcCCEEEEECcccc----cccccCcccCCCC---EEEEcHHHcCCCCc--eEEEEECCCC
Confidence 99999977 56889999999999999999986 3333344433332 67778899766566 7888886432
Q ss_pred cchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCc---ee
Q 014631 273 GILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEG---SM 348 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~---~~ 348 (421)
... +.+...........++++.....++.++++. ...++++..++.+++++++.+.|.+ +|++.+. .+.. +.
T Consensus 215 ~~~--p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~-~~~~~~~~~ 290 (379)
T TIGR03402 215 RFR--PLLRGGHQERGRRAGTENVPGIVGLGKAAEL-ATEHLEEENTRVRALRDRLEAGLLARIPDARLN-GDPTKRLPN 290 (379)
T ss_pred CCC--CcccCCccCCCcCCCCccHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEe-CCCccCCCC
Confidence 110 1110000011112356777777777777764 3356788888999999999999985 8887733 3321 11
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~~~ 407 (421)
.+.+.++. .+..++... +.++||.+.+|..|.. .+.+|+|++ ++++||++++
T Consensus 291 ~~~~~~~~------~~~~~~~~~-l~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~ 363 (379)
T TIGR03402 291 TVNISFEY------IEGEAILLL-LDMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVL 363 (379)
T ss_pred EEEEEecC------CCHHHHHHh-hccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHH
Confidence 22222322 135566654 4778999999886632 268999998 8999999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
+.|++++++++
T Consensus 364 ~~l~~~~~~~~ 374 (379)
T TIGR03402 364 EVLPPIIARLR 374 (379)
T ss_pred HHHHHHHHHHH
Confidence 99999987764
No 134
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.98 E-value=3.6e-29 Score=239.40 Aligned_cols=333 Identities=16% Similarity=0.172 Sum_probs=232.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
++++++|+.++ |.++..+|.+++++.+++++.... .|+......+|++.++++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g--------~~~~l~~~ 112 (402)
T TIGR01821 44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHG--------KESALVFT 112 (402)
T ss_pred CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhC--------CCeEEEEC
Confidence 47789998887 677889999999999999873211 12223335788888888873 13456666
Q ss_pred CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---c-CceEEEEeC
Q 014631 117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---E-NTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~-~~~~i~~~~ 190 (421)
+|++++..++..+.. +++.|+.....|.+....+...|.++..++. .|++++++.++ + ++++|++++
T Consensus 113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~ 185 (402)
T TIGR01821 113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES 185 (402)
T ss_pred chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence 678888888887764 6777777766777776777778877665543 25666666553 2 578889999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
|+||+|.+.+ +++|.++|++||+++|+||+|+...++..+.......+. .+..++++||||.|+++| ||++++
T Consensus 186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~ 259 (402)
T TIGR01821 186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS 259 (402)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence 9999999966 888899999999999999999854433221111111111 123577889999998888 898875
Q ss_pred CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++++.+..... .+.+.++..+.++.++|+...+. ...+++++++++++.+.|+++ |+. +..+.
T Consensus 260 --------~~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~- 326 (402)
T TIGR01821 260 --------RKLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIP-VIPNP- 326 (402)
T ss_pred --------HHHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-
Confidence 356666654322 23456777788887887642222 445566778889999999887 776 32444
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+.++.+.++.. ....++...+++++||.+.+...+.. ..++|++++ ++++|++++++.|+++++++
T Consensus 327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 44555555421 02456777666677999988654432 368999997 89999999999999998764
No 135
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.98 E-value=2.7e-29 Score=238.83 Aligned_cols=338 Identities=12% Similarity=0.107 Sum_probs=239.9
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+|+.+..+ +.++.+.+++.+.+..... +.|+ ..+...+++++++++.. .+. .++++|++|+|+++++
T Consensus 2 yld~aa~~-----~~~~~v~~~~~~~~~~~~~n~~~~~~~~-~~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal 73 (382)
T TIGR03403 2 YLDNNATT-----MLDPKVKELMDPFFCDIYGNPNSLHQFG-TATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESN 73 (382)
T ss_pred cccCcCCC-----CCCHHHHHHHHHHHHhcCcCCccccHHH-HHHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHH
Confidence 46666544 5678899999988865211 1222 23457888888888753 331 2678999999999999
Q ss_pred HHHHHHhc-----CC-CCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 123 QVILTVLA-----RP-GANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 123 ~~~~~~l~-----~~-gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
+.+++++. ++ +++|+++...|+++... ++..|.+++.+++++ ++.+|++++++.++++++++++++|+|
T Consensus 74 ~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n 151 (382)
T TIGR03403 74 NWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANN 151 (382)
T ss_pred HHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccC
Confidence 99998752 45 47899998888766444 456799999998753 346899999999988899999999999
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG 273 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 273 (421)
|||..++ +++|.++|+++|+++++|+++.. |.....+...+.+ +++.|++|++|.+| +|++++++...
T Consensus 152 ~tG~~~~---~~~I~~la~~~g~~~ivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~gp~G--~g~l~vr~~~~ 219 (382)
T TIGR03403 152 ETGMIFP---IKEIGEICKERGVLFHTDAVQAI----GKIPVDVQKAGVD---FLSFSAHKFHGPKG--VGGLYIRKGVE 219 (382)
T ss_pred CCccccC---HHHHHHHHHHcCCEEEEechhhc----CCCccCccccCCC---EEEEcchhhCCCCc--eEEEEECCCCC
Confidence 9999977 66888899999999999999875 2222233332222 77889999987777 68888764321
Q ss_pred chhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---eeEE
Q 014631 274 ILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---SMFV 350 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~~ 350 (421)
.. +.+...........++++.+.+.++.++++. ..+.++...++++++++++.+.|++++++.+. .+.. +.++
T Consensus 220 ~~--p~~~g~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~ 295 (382)
T TIGR03403 220 LT--PLFHGGEHMGGRRSGTLNVPYIVAMGEAMRL-ANEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTI 295 (382)
T ss_pred CC--CcccCCCCCCCcccCCcChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEE
Confidence 11 1110000001112357888888888888864 33457777889999999999999998888843 4321 2354
Q ss_pred EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------------C-----CCeEEEEec--CCHHHHHHHHHH
Q 014631 351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------------M-----KNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
.+.++. .+..++... |.++||.++.|..|. . .+.+|+|++ ++++|++++++.
T Consensus 296 ~~~~~~------~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~ 368 (382)
T TIGR03403 296 LISIKG------VEGEAMLWD-LNKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEV 368 (382)
T ss_pred EEEeCC------CCHHHHHHh-hccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHH
Confidence 555542 135566665 477899999876552 1 257999998 899999999999
Q ss_pred HHHHHHHhh
Q 014631 410 IKAFCQRHA 418 (421)
Q Consensus 410 l~~~~~~~~ 418 (421)
|++++++++
T Consensus 369 l~~~~~~~~ 377 (382)
T TIGR03403 369 FKKAVQRLR 377 (382)
T ss_pred HHHHHHHHH
Confidence 999988765
No 136
>PRK02948 cysteine desulfurase; Provisional
Probab=99.98 E-value=8.8e-30 Score=242.22 Aligned_cols=335 Identities=12% Similarity=0.092 Sum_probs=235.0
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
++|+.+..+ +.++.+.+++.+.+.... .++.. ..-+.++|+.+++++ +.++++|++++|+
T Consensus 2 ~yld~a~~~-----~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~ 69 (381)
T PRK02948 2 IYLDYAATT-----PMSKEALQTYQKAASQYF-GNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGG 69 (381)
T ss_pred EeccCCCCC-----CCCHHHHHHHHHHHHhcC-CCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcH
Confidence 577777654 577889999988876421 11111 112457777788777 3568899999999
Q ss_pred HHHHHHHHHHhc----CCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 119 KQAIQVILTVLA----RPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 119 ~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
++++..++.++. ++||.|+++..+|+++.. .++..|.+++.+++++ ++.+|++++++.++++++++++++|
T Consensus 70 t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~ 147 (381)
T PRK02948 70 TESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHA 147 (381)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECC
Confidence 999999888775 578999999988876544 4566799999888753 3568999999998888899999999
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+||||.++| +++|.++|+++|+++++|+++.. |.....+..+ +..+++.|+||.+|.+| +|++++++.
T Consensus 148 ~n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~----g~~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~~ 215 (381)
T PRK02948 148 NSEIGTIQP---IAEIGALLKKYNVLFHSDCVQTF----GKLPIDVFEM---GIDSLSVSAHKIYGPKG--VGAVYINPQ 215 (381)
T ss_pred cCCcEeehh---HHHHHHHHHHcCCEEEEEChhhc----cccccCcccC---CCCEEEecHHhcCCCCc--EEEEEEcCC
Confidence 999999965 77888999999999999988765 2222222232 23477889999988788 799888642
Q ss_pred CcchhHHHHHH-HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee--
Q 014631 272 SGILQELRIVD-SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-- 348 (421)
Q Consensus 272 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-- 348 (421)
.... .+.. .........++++.+++.++.++++.. .++.++.+++++++++++.+.|+++ ++.+.......+
T Consensus 216 ~~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~ 290 (381)
T PRK02948 216 VRWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCL 290 (381)
T ss_pred CCCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCc
Confidence 1100 0000 000111123578888888888888752 2467888899999999999999987 554221111111
Q ss_pred --EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHH
Q 014631 349 --FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEE 405 (421)
Q Consensus 349 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~ 405 (421)
.+.+.++. . +..++...| .++||.+.+|..+.. .+++|+|++ ++++|+++
T Consensus 291 ~~i~~~~~~~-----~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~ 363 (381)
T PRK02948 291 PHIIGVTIKG-----I-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT 363 (381)
T ss_pred CCEEEEEeCC-----C-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence 11112221 1 345566554 678999998875311 368999998 79999999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
+++.|+++++++.+
T Consensus 364 l~~~l~~~~~~~~~ 377 (381)
T PRK02948 364 TIHALETIGNQFYR 377 (381)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999877643
No 137
>PRK07179 hypothetical protein; Provisional
Probab=99.98 E-value=6.9e-29 Score=237.73 Aligned_cols=332 Identities=15% Similarity=0.129 Sum_probs=231.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----CCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-----FDCY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----~~~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|..+++|+..+ +.++..+|.+++++.+++++.. ...+ .......+|++.++++++ .+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTG--------FESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhC--------CCcEEEE
Confidence 466788888776 6667889999999999987521 1111 111235788888888873 2467889
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNP 194 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~np 194 (421)
+||++|+..+++++..+||.|+++.+.|.+....+...|.++..++. .|++++++.+++ ++++|++.+++||
T Consensus 121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999999999999999999999888888888887765542 488999998865 4677888889999
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEeeCCCc
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPSG 273 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 273 (421)
||.+.| +++|.++|+++|+++|+||+|+....+..+...+..++.... .+++.|+||+++ .|+|+++++
T Consensus 194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~---- 263 (407)
T PRK07179 194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCP---- 263 (407)
T ss_pred CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeC----
Confidence 999977 778899999999999999999864433222111223332222 377889999975 368999985
Q ss_pred chhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE
Q 014631 274 ILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV 350 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 350 (421)
+++++.+..... ..++.++....++.++++.. ....+.+++++++++++.+.|+++ |+. +. + .+.++
T Consensus 264 ----~~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~-~-~~~i~ 333 (407)
T PRK07179 264 ----RELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR-S-ESQII 333 (407)
T ss_pred ----HHHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC-C-CCCEE
Confidence 245555543321 12233444444444555431 223456788999999999999987 777 42 2 35677
Q ss_pred EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
++.++.. .....+...+.++||.+..-.... ..+.+||+++ +++++++++++.|++++++.
T Consensus 334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 7766421 123344445577899743211111 2468999998 79999999999999988764
No 138
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=2.7e-29 Score=239.01 Aligned_cols=333 Identities=13% Similarity=0.149 Sum_probs=230.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|.++|||..|.+..+.+ +.++.+.+++.+++.+... ..| +.....++++.+++++ | .+++++++||+
T Consensus 25 ~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~~~~~~sg~ 94 (379)
T TIGR00707 25 NGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLY-YTEPQEELAEKLVEHS----G----ADRVFFCNSGA 94 (379)
T ss_pred CCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhcccccccc-CCHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence 478999999986554444 4678999999998876321 123 2222445555565554 3 24999999999
Q ss_pred HHHHHHHHHhc---C----CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCCCCccC--CHHHHHhhhccCceEE
Q 014631 120 QAIQVILTVLA---R----PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPEKGWEV--DLDGLEALADENTVAM 186 (421)
Q Consensus 120 ~al~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~~~~~~--d~e~l~~~~~~~~~~i 186 (421)
+++..+++.+. . +||+|++++|+|+++...+...+..... .++..+..+.. |++++++.+.++++++
T Consensus 95 ~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 174 (379)
T TIGR00707 95 EANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAV 174 (379)
T ss_pred HHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEE
Confidence 99999988652 2 3799999999999887666655543321 22211111111 7899999888778888
Q ss_pred EEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 187 VIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 187 ~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
++..++|++|.. ++.+++++|.++|+++|+++|+||+|.++.+.|.. .+....+...+++ +|||.++ +|+|+||
T Consensus 175 ~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~-~~~~~~~~~~d~~---t~sK~~~-~G~riG~ 249 (379)
T TIGR00707 175 IVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKF-FAYEHYGIEPDII---TLAKGLG-GGVPIGA 249 (379)
T ss_pred EEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchh-hhHHhcCCCCCEE---EEccccc-CCcccEE
Confidence 776556777864 78999999999999999999999999987665532 2222222222333 7899987 9999999
Q ss_pred EEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---CCcccc
Q 014631 266 LVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---PCITCP 341 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~ 341 (421)
++++ +++++.+.... ....+.+++.+.++.++|+.... .+..++++++++.+++.|+++ .++. .
T Consensus 250 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~ 317 (379)
T TIGR00707 250 TLAK--------EEVAEAFTPGDHGSTFGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELGKNYPNK-E 317 (379)
T ss_pred EEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHHhhCCCC-c
Confidence 9985 35777776542 22346788999999888864221 235566777777777777654 1221 1
Q ss_pred CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
.+..|.++|+.++. +..++... +.++||.+.|+. .+++|++++ .+++++++++++|++++
T Consensus 318 -~~~~g~~~~~~~~~-------~~~~~~~~-l~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 318 -VRGKGLMLGIELEA-------PCKDIVKK-ALEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred -cccCceEEEEEecC-------cHHHHHHH-HHHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 22357788888763 24556555 577899999853 478999985 78999999999998763
No 139
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=2.8e-29 Score=239.94 Aligned_cols=336 Identities=14% Similarity=0.134 Sum_probs=234.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|++++||..|.+....+ +.+|.+.+++.+++++.. ...|....+ .++.+.+++++ + ...++++++++|+
T Consensus 40 ~dg~~~lD~~s~~~~~~lG-~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~-~~~~~~v~~~~sg 112 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNALG-HAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----G-APEGGRVFFCNSG 112 (398)
T ss_pred CCCCEEEECCcCHhhccCC-CCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----C-CCCCCEEEEeCch
Confidence 3488999999886554333 357999999999998632 224543322 45555555554 3 1235799999999
Q ss_pred HHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhc-Cce------------eEeeeccCCCCccCCHHHHHhhhccCce
Q 014631 119 KQAIQVILTVLARPG-ANILLPKPGFPLYEANARHT-RLE------------IRHFDLLPEKGWEVDLDGLEALADENTV 184 (421)
Q Consensus 119 ~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~~~~~d~e~l~~~~~~~~~ 184 (421)
++++..+++.+..+| +.|+..+++|+++...+... |.. +..+|. .|++++++.+.++++
T Consensus 113 sea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~~~~ 185 (398)
T PRK03244 113 AEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPY-------GDVDALAAAVDDDTA 185 (398)
T ss_pred HHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCC-------CCHHHHHHhhcCCeE
Confidence 999999999776666 57777888999875444322 211 111111 278899988877788
Q ss_pred EEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 185 AMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
++++..++||+|.++++++ +++|.++|++||+++|+||+|+++.+.|..+ .+...+...++ .+|||+++ +|+|+
T Consensus 186 aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~i 260 (398)
T PRK03244 186 AVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPI 260 (398)
T ss_pred EEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCccc
Confidence 8888888999999987655 9999999999999999999999887766532 22222222223 37899986 89999
Q ss_pred EEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-
Q 014631 264 GWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP- 341 (421)
Q Consensus 264 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~- 341 (421)
|+++++ +++++.+.... ..+.+.+++.+.++.++|+...+ ++..++++++.+++.+.|+++ +...+
T Consensus 261 g~~~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 328 (398)
T PRK03244 261 GACLAF--------GPAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVD 328 (398)
T ss_pred EEEEEc--------HHHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCcee
Confidence 999996 35666665432 23457888999999998864221 234566777788888888875 22111
Q ss_pred CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.....|+++|++++.. ....+...+ .++||.+.+.. .+.+|++++ .+++++++++++|++++++..
T Consensus 329 ~v~g~g~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 329 HVRGRGLLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred eEeeccEEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 1123678999988631 244555554 66899998742 478999987 789999999999999998754
No 140
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=6.6e-29 Score=238.13 Aligned_cols=332 Identities=17% Similarity=0.173 Sum_probs=230.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
++++++|+..+ +.++..+|.+.+++.+++++... ..|++...+.+|++.++++++ .++.+++ +
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g-------~~~~~~~-~ 113 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHG-------KEAALVF-T 113 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhC-------CCcEEEE-C
Confidence 47789998887 66778899999999998876322 123344446788888888872 2444444 4
Q ss_pred CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631 117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~ 190 (421)
+|++++..++..+.. +++.|+.....|.+....+...+.++..++. .|++++++.++ +++++|++++
T Consensus 114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 556677777776654 7777777777777776777777877665543 26677777664 4678899999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
|+||+|.+.+ +++|.++|++||+++|+||+|+...++ |........+. .+..++++||||.||++| ||+++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~-~~~div~~t~sKa~g~~G---G~~~~ 259 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLM-DRIDIIEGTLAKAFGVMG---GYIAG 259 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCC-CCCeEEEEecchhhhccC---ceEec
Confidence 9999999965 888899999999999999999843332 32221111111 233588899999998887 99887
Q ss_pred eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
+ +++++.+..... .+.+.++..+.++.++++.... ....+++++++++++.+.|+++ |+. +..+.
T Consensus 260 ~--------~~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~ 327 (407)
T PRK09064 260 S--------AALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIP-VMPNE 327 (407)
T ss_pred C--------HHHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC
Confidence 5 356666554322 2335566677777777754221 1334678889999999999986 777 32333
Q ss_pred ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+.++++.++.. ....++...+++++||.+.+...+.. .+++|++++ ++++|++++++.|+++++++
T Consensus 328 -~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 328 -SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred -CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 55666666421 12456777776677999988654433 267999998 79999999999999998765
No 141
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=1e-28 Score=233.25 Aligned_cols=322 Identities=14% Similarity=0.142 Sum_probs=220.3
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC-------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSP-------SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG 133 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g 133 (421)
...+.+.+++.+.-.......+.. ..-+..+++.+|++++ . +.+.+++|+++++..++.++.++|
T Consensus 19 ~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~e~lA~~~g------~--~~~~i~~g~~~a~~~~~~~l~~~g 90 (370)
T TIGR02539 19 VLTEAARKALVEFGDGYSVCDFCGGRLDQITKPPIHDFLEDLAEFLG------M--DEARVTHGAREGKFAVMHALCKEG 90 (370)
T ss_pred CCcHHHHHHHHHHhhccccccccccccccccchHHHHHHHHHHHHhC------C--CceEEECChHHHHHHHHHHhhCCC
Confidence 566777777777644221111110 1124677888888873 2 356778999999999999999999
Q ss_pred CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEEeCCCCCcccccCHHHHHH
Q 014631 134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVIVNPGNPCGNVFTYQQLQK 206 (421)
Q Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~ 206 (421)
|.|+++.+.|.+....++..|++++.++++.++++.+|++++++.+++ ++++|++++|+||||.. .++++
T Consensus 91 d~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~---~~l~~ 167 (370)
T TIGR02539 91 DWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNL---PDAGK 167 (370)
T ss_pred CEEEECCcccHHHHHHHHHcCCEEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccc---cCHHH
Confidence 999999999877777888999999999976555678999999998753 57789999999999998 45888
Q ss_pred HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631 207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG 286 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
|.++|+++|+++|+|++|+.+.. .......+ ..++++|+||+++ +|.|+||++++ +++++.+..
T Consensus 168 i~~la~~~~~~livDea~~~g~~----~~~~~~~~---~di~v~s~sK~~~-~~g~~G~l~~~--------~~~i~~l~~ 231 (370)
T TIGR02539 168 VAKVCREKGVPLLLNCAYTVGRM----PVSAKEIG---ADFIVGSGHKSMA-ASGPCGVLGMS--------EEWEDIVLR 231 (370)
T ss_pred HHHHHHHcCCeEEEECccccCCc----CCCHHHcC---CCEEEeeCccccc-CCCCEEEEEEC--------HHHHhhhcc
Confidence 88999999999999999987321 11111222 2367799999987 56689999986 356666655
Q ss_pred hcccc---------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCc
Q 014631 287 YLNIS---------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNL 356 (421)
Q Consensus 287 ~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~ 356 (421)
....+ .+.....+.++..++.. ..++++...+.++. ++++.+.|+++ |+.++ ..|..++|++++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~ 308 (370)
T TIGR02539 232 KSRYSPVKEVELLGCTSRGAPIVTMMASFPH-VVERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPG 308 (370)
T ss_pred cccCCccceeeeecccccccHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCc
Confidence 43211 11222244444444532 12344444444444 45899999987 77632 246678888887753
Q ss_pred cc---ccCCCChHHHHHHHHhhcCee-EEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 357 SL---LEGISDDMEFALQLAKEESVI-VLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 357 ~~---~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
.. .........+.. .|.++||. +++| ..+++|+++. .++++++++++.|+++++++
T Consensus 309 ~~~~~~~~~~~~~~~~~-~L~e~GI~~ir~~----~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 309 FHEIAQKHKRRGYFLYE-ELKKRGIHGIRSG----QTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred hhHHhhhhccccHHHHH-HHHhCCCccccCC----cceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 10 000112233444 55677997 5543 3568999964 79999999999999988754
No 142
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=6.9e-29 Score=237.91 Aligned_cols=339 Identities=16% Similarity=0.105 Sum_probs=234.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC------CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA------EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.+.++|.-|. -+.++.+.+++.+.+... ....|....+.+++++.+++++++.+|. +...|+++ |
T Consensus 19 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~--~~~~v~~~-s 89 (402)
T cd00378 19 RETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGA--EYANVQPH-S 89 (402)
T ss_pred HhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCC--CceeeecC-C
Confidence 4578886554 245789999998765321 1223555566678888777777766663 34455555 5
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-----HhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPLYEAN-----ARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~ 190 (421)
|++++..++.+++++||+|++++|+|.++... +...|.++..+++..+. ++.+|++++++.+. ++++++++++
T Consensus 90 gt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~~ 169 (402)
T cd00378 90 GSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAGA 169 (402)
T ss_pred cHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEecC
Confidence 67999999999999999999999999876433 55678777777765442 57899999999884 5788888888
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
|+||+ . .++++|+++|+++|+++|+|++| .++.+.|....++. .. + ++++|+||+| +|+|.||++++
T Consensus 170 ~~~~~--~---~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~--d-v~~~s~sK~l--~G~~gg~i~~~ 237 (402)
T cd00378 170 SAYPR--P---IDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA--D-VVTTTTHKTL--RGPRGGLILTR 237 (402)
T ss_pred cccCC--C---cCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC--c-EEEeccccCC--CCCCceEEEec
Confidence 88764 3 35889999999999999999996 44444343222222 11 2 6789999985 78899999986
Q ss_pred CCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 270 DPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+ +++.+.+..... ..+++......++..++......+.++.+++++++++++.+.|++. |+.+...|.++
T Consensus 238 ~-------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 309 (402)
T cd00378 238 K-------GELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTDN 309 (402)
T ss_pred c-------HHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCCC
Confidence 3 246666654432 1223333334343444432222356777888999999999999987 87743346778
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC------CCCeEEEEec-C-----CHHHHHHHHHHHHHHHH
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG------MKNWLRITFA-I-----EPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~iRi~~~-~-----~~e~l~~~~~~l~~~~~ 415 (421)
+++|+.++... .+.. .+.++++++||.+.++..+. ...++|++++ . +.++++.+++.|.++++
T Consensus 310 ~~v~v~~~~~~----~~~~-~~~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 310 HLVLVDLRPKG----ITGK-AAEDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred eEEEEeCCccC----CCHH-HHHHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 99999987421 1233 44556788999998643221 2468999986 2 58999999999999875
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
+
T Consensus 385 ~ 385 (402)
T cd00378 385 D 385 (402)
T ss_pred c
Confidence 4
No 143
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.2e-28 Score=234.80 Aligned_cols=325 Identities=13% Similarity=0.091 Sum_probs=241.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..++.+.+++.+... .+. ..+..++.+.+.+.+.+.+|.+ ..+.++++++++++++.++..+.++||+|++.+
T Consensus 19 ~~~~~V~~a~~~~~~-----~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 19 NIPERVLRAMNRPNE-----DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCHHHHHHhcCCCC-----CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 467888887754331 121 3345778888888887777743 234678889999999999998999999999999
Q ss_pred CCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 141 PGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 141 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
++|.+. ...++..|.+++.++.+++ ..+|++++++.+++ +++++++++++||||..+|.+++.++++ |+++
T Consensus 92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~ 168 (401)
T PLN02409 92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH 168 (401)
T ss_pred CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence 999765 4677888999999987543 34799999998875 6899999999999999988666666666 9999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc------
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------ 288 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------ 288 (421)
|+++|+|++++. |.....+..++. .+++.|.+|++++|. ++||+++++ ++.+++....
T Consensus 169 g~~~vvD~v~s~----g~~~id~~~~~~---D~~~~s~~K~l~~P~-G~G~l~~~~--------~~~~~~~~~~~~~~~~ 232 (401)
T PLN02409 169 PALLLVDGVSSI----GALDFRMDEWGV---DVALTGSQKALSLPT-GLGIVCASP--------KALEASKTAKSPRVFF 232 (401)
T ss_pred CcEEEEEccccc----CCccccccccCc---cEEEEcCccccCcCC-CcceeEECH--------HHHHHHhcCCCCCeec
Confidence 999999999985 322223333332 267778899986543 699999863 3444433210
Q ss_pred ------------cc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-c---eeEEE
Q 014631 289 ------------NI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-G---SMFVM 351 (421)
Q Consensus 289 ------------~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-~---~~~~~ 351 (421)
.. ..+++...+.++.++++...+.+++++.++++++++++.+.|+++ |+.++ .+. . +...+
T Consensus 233 ~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~-~~~~~~~s~~v~~ 310 (401)
T PLN02409 233 DWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLC-TKKPEWRSDTVTA 310 (401)
T ss_pred CHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcccceEE
Confidence 01 236777788888888876556788999999999999999999887 77744 332 1 12345
Q ss_pred EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+.++.. .+..++...+++++||.+.+|.....++.+||+.. ++.+++..++++|++++.++.
T Consensus 311 ~~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~g 374 (401)
T PLN02409 311 VVVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDVG 374 (401)
T ss_pred EeCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 555532 24567777888899999999876545789999987 789999999999999998764
No 144
>PLN02721 threonine aldolase
Probab=99.97 E-value=6.1e-29 Score=234.41 Aligned_cols=330 Identities=14% Similarity=0.137 Sum_probs=218.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.++++|+.+.+. .+++.+.+++.+.........|.+. ..++|++++++++. +.++++++|++++.
T Consensus 5 ~~~~~~~~~~~~-----~~~~~~~~a~~~~~~~~~~~~~~~~--~~~l~~~la~~~~~--------~~~~~~~~Gs~a~~ 69 (353)
T PLN02721 5 SRVVDLRSDTVT-----KPTDAMRAAMANAEVDDDVLGYDPT--ALRLEEEMAKIFGK--------EAALFVPSGTMGNL 69 (353)
T ss_pred hhhhhhhccccc-----CCCHHHHHHHHhccCCCcccCCCHH--HHHHHHHHHHHhCC--------ceeEEecCccHHHH
Confidence 457889999866 2467788888654111122233333 68999999999842 23566666676766
Q ss_pred HHHHHhcC-CCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cCceEEEEeCC-
Q 014631 124 VILTVLAR-PGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------ENTVAMVIVNP- 191 (421)
Q Consensus 124 ~~~~~l~~-~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~~~~i~~~~p- 191 (421)
.++..+++ +||+|++++|+|.+... .+...|++++.++.+ .++.+|+|++++.++ +++++++++++
T Consensus 70 ~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~ 147 (353)
T PLN02721 70 ISVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTH 147 (353)
T ss_pred HHHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEeccc
Confidence 77777776 99999999999875554 567789999888764 345689999999887 57888888775
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+||||..++.+++++|.++|+++|+++|+|++|........+. ......... ..++.|+||+|+. ++|+++..+
T Consensus 148 ~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~~-d~~~~s~sK~l~~---~~G~~~~~~- 221 (353)
T PLN02721 148 ANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKAA-DSVSVCLSKGLGA---PVGSVIVGS- 221 (353)
T ss_pred cccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhhC-CEEEEecccccCC---ceeeEEecC-
Confidence 7899999999999999999999999999999986422110011 111111111 1345579999764 357644322
Q ss_pred CcchhHHHHHHHHhhhcccc-cCCchHHHHHH--HHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc-cCCCCce
Q 014631 272 SGILQELRIVDSIKGYLNIS-SGPATFVQGAV--PQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC-PRKPEGS 347 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~-~~~~~~~ 347 (421)
+++++.+....... .+++.....++ ...++ ...+.. ++..++++.+.+.|++++++.+ +..|. +
T Consensus 222 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~ 289 (353)
T PLN02721 222 ------KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQ----ENVPKL-EDDHKKAKLLAEGLNQIKGLRVNVAAVE-T 289 (353)
T ss_pred ------HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHH----HHHHHH-HHHHHHHHHHHHHHHhCCCcEEecCCcc-c
Confidence 34556554443321 12222222222 22232 223332 3345677889999998877753 33343 5
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
+++|++++... ..+...++.+| .++||.+.|+. ..++|++++ .+++++++++++|++++..
T Consensus 290 ~~~~~~~~~~~---~~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 290 NIVYFDITDGS---RITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred eEEEEEccCCc---cccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 67888886410 01356677766 57899999974 468999997 7899999999999988753
No 145
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=1.5e-28 Score=231.42 Aligned_cols=327 Identities=16% Similarity=0.154 Sum_probs=223.3
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
++++|+..+ +.+.+.+|.+.+++++.+++... ..|. ......++++.+++++ + . + +.++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~-~-~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K-E-AALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C-C-CEEEeccH
Confidence 467777665 45566689999999999986321 1121 2222356666666665 3 2 2 34555666
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceEEEEeCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIVNPGN 193 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~i~~~~p~n 193 (421)
++++..++.+++++||.|++++|.|.++...+...|++++.++. +|.+++++.+++ +++++++++++|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 78888888888899999999999999988888889998877652 467778777653 456677788999
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC-cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP-YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
|||... ++++|.++|+++|+++|+|++|+...+.... ..........+..++++|+||.|+.+| ||++.+
T Consensus 144 ~tG~~~---~~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~--- 214 (349)
T cd06454 144 MDGDIA---PLPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGS--- 214 (349)
T ss_pred CCCCcc---CHHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECC---
Confidence 999984 5889999999999999999999753332111 111111123345688999999987755 888874
Q ss_pred cchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 273 GILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
+++.+.+..... ..++.++..+.++.+.++...+ .+..+++++++++.+.+.|.++ ++.+. .+.++.+
T Consensus 215 -----~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~ 285 (349)
T cd06454 215 -----KELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII 285 (349)
T ss_pred -----HHHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence 245555544322 1234566666677777754222 4567788999999999999887 77633 3434444
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---CCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG---MKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.++.++.. .+..++...|++ +||.+.++.... ..+++|++++ ++++++++++++|+++
T Consensus 286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44434311 135667776654 599998864321 1468999998 6999999999999864
No 146
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=4.2e-29 Score=234.08 Aligned_cols=313 Identities=14% Similarity=0.128 Sum_probs=218.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~ 139 (421)
+++++.+++++.+..... ..|++.....++++.++++++ ++++++++||++++..++.++.++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~g--------~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELFG--------KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHhC--------CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 367889999998865432 357666667888988888872 5678888888999999999999999999999
Q ss_pred CCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEEeCCCCCcccccCHHHHHHHHH
Q 014631 140 KPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVIVNPGNPCGNVFTYQQLQKIAE 209 (421)
Q Consensus 140 ~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~~~p~nptG~~~~~~~l~~i~~ 209 (421)
+|+|.++.. .+...|++++.++.+ . +.+|++++++++.+ +++++++++|+|| |..++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~--~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE--N-GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC--C-CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999976542 345579998888753 2 56899999998864 6788999999997 66679999999999
Q ss_pred HHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc
Q 014631 210 KARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN 289 (421)
Q Consensus 210 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
+|+++|+++|+|++|..+.....+. .+.......+ +++.|+||+|+++| |++++.+ +++++.+.....
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~-------~~~~~~~~~~~~ 221 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGN-------RDFIARARRRRK 221 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECC-------HHHHHHHHHHHH
Confidence 9999999999999986432111111 2222222222 45779999998887 5544322 356666655432
Q ss_pred c---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChH
Q 014631 290 I---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDM 366 (421)
Q Consensus 290 ~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (421)
. ....+.+.+.++...|+. ....+..+++.++++++.+.|+++ ++. +..+ .+.++.+.++... ....
T Consensus 222 ~~~~~~~~~~~~~~a~~~~L~~---~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~-~~~~~~v~~~~~~----~~~~ 291 (338)
T cd06502 222 QAGGGMRQSGFLAAAGLAALEN---DLWLRRLRHDHEMARRLAEALEEL-GGL-ESEV-QTNIVLLDPVEAN----AVFV 291 (338)
T ss_pred HhCCChhhHHHHHHHHHHHhcC---chHHHHHHHHHHHHHHHHHHHHhc-CCC-cccc-cCCeEEEecCCcc----HHHH
Confidence 1 223455666777677753 223455577778889999999987 555 4233 4556666554210 0112
Q ss_pred HHHHHHH--hhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 367 EFALQLA--KEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 367 ~~~~~ll--~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
.+...+. .++|+.+.+.. .+++|++++ +++++++++++++++
T Consensus 292 ~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 292 ELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 2222222 15799987753 278999998 689999999998865
No 147
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=8.7e-29 Score=234.99 Aligned_cols=315 Identities=18% Similarity=0.210 Sum_probs=224.2
Q ss_pred CCcHHHHHHHHHHHhcCCCC-CCCC-------CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcC
Q 014631 61 RTTPVAADAVVDAVRSAEFD-CYSP-------SVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLAR 131 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~-~y~~-------~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~ 131 (421)
++++.+.+++.+.+...... ..+. ...+.++++.++++++ .+ ++++++|+|++++++.++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFIN------APSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhC------CCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 56788999998877542110 0001 1224578888888873 44 67899999999999999999876
Q ss_pred ---CCCeEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631 132 ---PGANILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 132 ---~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 204 (421)
+||+|++++++|.+. ...++..|++++.++.+ .++.+|++++++.+.++++++++++|+||||...+ +
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 899999999999874 33455779999999875 34568999999999888999999999999999966 6
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 284 (421)
++|.++|+++|+++++|++|+... ...++...+. .+++.|++|+++. .++|++++++ ++.+.+
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~~ 221 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAGH----MPVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEEM 221 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCc----eeeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhcC
Confidence 788899999999999999987532 1122222222 2666789999765 4589998853 344443
Q ss_pred hhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 285 KGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 285 ~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
..... ..++++.....++..+++...+..++++.++.+++++++.+.|++++++.++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 32210 01245555566666666543345567788888899999999999988877432
Q ss_pred CC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 343 KP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 343 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
.+ ..+.++++.++. .+..++...+ .++||.+.+|..+ +.++++|+|++ ++++|++++++.|
T Consensus 302 ~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 21 124456666542 1355666655 6689999887653 23578999998 7999999998864
No 148
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=2.7e-29 Score=234.54 Aligned_cols=314 Identities=16% Similarity=0.151 Sum_probs=216.4
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVIL 126 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~ 126 (421)
|+|+++.- ..++|.+++++.+.... ...|++.....+|+++++++++ . +.+++++|+++++...+
T Consensus 2 ~~~~~~~~-----~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~g------~--~~~~v~~~g~~a~~~~l 66 (333)
T PRK10534 2 IDLRSDTV-----TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELSG------K--EAALFLPTGTQANLVAL 66 (333)
T ss_pred cccccccC-----CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHhC------C--CeEEEeCchHHHHHHHH
Confidence 56766652 23678888998775443 3478777778999999999973 3 34467777888888878
Q ss_pred HHhcCCCCeEEEcCCCCcc-hHHH-HhhcC-ceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCccc
Q 014631 127 TVLARPGANILLPKPGFPL-YEAN-ARHTR-LEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGN 197 (421)
Q Consensus 127 ~~l~~~gd~Vl~~~p~y~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~ 197 (421)
.+++++||+|+++.|.|.. +... +...+ .+++.++++ .++.+|++++++++.+ +++++++++|+ ||.
T Consensus 67 ~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~ 142 (333)
T PRK10534 67 LSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGK 142 (333)
T ss_pred HHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CCe
Confidence 7888999999999888853 3221 23333 566666653 4578999999998865 57888888766 599
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEE-EEEeeCCCcc
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG-WLVTSDPSGI 274 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~~ 274 (421)
+++.+++++|+++|++||+++++||+|..... .+.. ........+.+ +.||||.|+++ +| |++++
T Consensus 143 v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~----- 210 (333)
T PRK10534 143 VLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSF-TICLSKGLGTP---VGSLLVGN----- 210 (333)
T ss_pred ecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEE-EEEeEcCCCCc---ccceEEcC-----
Confidence 99999999999999999999999999874221 0111 11111111223 23899998654 67 56654
Q ss_pred hhHHHHHHHHhhhccccc---CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631 275 LQELRIVDSIKGYLNISS---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 351 (421)
+++++.+......+. ..+.+++.++...++. . .+..++.++.++++.+.|+++ |+. +..| .++|+|
T Consensus 211 ---~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv~ 279 (333)
T PRK10534 211 ---RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNMLF 279 (333)
T ss_pred ---HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEEE
Confidence 467777766554322 1233455555555542 1 233334455678999999987 887 4344 688999
Q ss_pred EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
++++.. +..++ .++++++||.++|+. .+|++.+ .+++++++++++|++++.
T Consensus 280 ~~~~~~------~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 280 VRVGEE------QAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EECCch------hHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 988631 24444 466788899999873 5788775 789999999999997764
No 149
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=9.8e-29 Score=234.95 Aligned_cols=333 Identities=15% Similarity=0.113 Sum_probs=234.3
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--C--CCCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--F--DCYSP----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~--~~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
+|+.+... +++|+.+.+++.+.++... . ..|.. ..++.++|+.++++++. ..+++|++|+|++
T Consensus 2 yld~a~~~----~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----~~~~~v~~~~g~t 72 (376)
T TIGR01977 2 YFDNAATT----YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNA-----PSSAHVVFTNNAT 72 (376)
T ss_pred CccCcccC----CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCc-----CCCCeEEEeCCHH
Confidence 45555422 4678899999988887532 1 12322 24467888999998842 1335899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
++++.++.+++++||+|++..++|.++. ..++..|.+++.++.+. ++.+|++++++.++++++++++++|+|||
T Consensus 73 ~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~t 150 (376)
T TIGR01977 73 TALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVT 150 (376)
T ss_pred HHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCc
Confidence 9999999998899999999999998764 34455699998888753 45689999999998889999999999999
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 275 (421)
|..++ +++|.++|+++|+++|+|++++... ....+...+. .+++.|++|+++.|. .+|.+++++.....
T Consensus 151 G~~~~---~~~i~~l~~~~~~~livD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~ 219 (376)
T TIGR01977 151 GTILP---IEEIGELAQENGIFFILDAAQTAGV----IPIDMTELAI---DMLAFTGHKGLLGPQ-GTGGLYIREGIKLK 219 (376)
T ss_pred cccCC---HHHHHHHHHHcCCEEEEEhhhccCc----cCCCchhcCC---CEEEecccccccCCC-CceEEEEcCCcCcC
Confidence 99977 6678899999999999999998733 2222222222 277889999975442 36777765432100
Q ss_pred hHHHHHH--------HH---hh--hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 276 QELRIVD--------SI---KG--YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 276 ~~~~~~~--------~~---~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
.+.. .+ .. .....++++.....++.++++...+...+.+.++.+.+.+++.+.|.+++++.+.
T Consensus 220 ---~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~- 295 (376)
T TIGR01977 220 ---PLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY- 295 (376)
T ss_pred ---ceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-
Confidence 0000 00 00 0011235666666777777765445567788889999999999999988887733
Q ss_pred CCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----------CCCeEEEEec--CCHHHHHHH
Q 014631 343 KPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----------MKNWLRITFA--IEPSALEEG 406 (421)
Q Consensus 343 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------~~~~iRi~~~--~~~e~l~~~ 406 (421)
.|. .+..+++.++. .+..++...|.+++||.+.+|..+. ..+.+|++++ ++++|++++
T Consensus 296 ~~~~~~~~~~~v~~~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~ 369 (376)
T TIGR01977 296 GPADPANRVGVVSFTVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKL 369 (376)
T ss_pred CCCCccccCCeEEEEECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHH
Confidence 331 13455555542 1455666666555599999887553 2478999998 899999999
Q ss_pred HHHHHH
Q 014631 407 LGRIKA 412 (421)
Q Consensus 407 ~~~l~~ 412 (421)
+++|++
T Consensus 370 ~~~l~~ 375 (376)
T TIGR01977 370 LEALSE 375 (376)
T ss_pred HHHHhh
Confidence 999875
No 150
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=5.7e-28 Score=227.91 Aligned_cols=322 Identities=14% Similarity=0.148 Sum_probs=219.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC
Q 014631 60 FRTTPVAADAVVDAVRSAEFD-------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP 132 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~ 132 (421)
-+..+.+.+++.+.-...... .+....-+.++++.++++++ + +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLG------M--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHcC------C--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 467888889988887431110 11111235789999999873 3 78999999999999999999999
Q ss_pred CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-------cCceEEEEeCCCCCcccccCHHHHH
Q 014631 133 GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-------ENTVAMVIVNPGNPCGNVFTYQQLQ 205 (421)
Q Consensus 133 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-------~~~~~i~~~~p~nptG~~~~~~~l~ 205 (421)
||+|+++.++|.+....++..|++++.++.+++.++.+|++++++.++ ++++++++++|+||||.. .+++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~---~~~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNL---HDAK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeee---ccHH
Confidence 999999999998887788899999999998655456899999998875 367899999999999988 6688
Q ss_pred HHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631 206 KIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285 (421)
Q Consensus 206 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 285 (421)
+|.++|+++|+++|+|++|+... ...+...++ ..++++|+||+++ ++.|+||++++ +++.+++.
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~l~-~~~~~G~l~~~--------~~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGR----MPVSGKELG---ADFIVGSGHKSMA-ASAPIGVLATT--------EEWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCC----cCCCHHHcC---CCEEEecCCcccc-CCCCeEEEEEC--------HHHHHHHh
Confidence 99999999999999999998522 111222232 2388999999986 45599999985 24566664
Q ss_pred hhccc---------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CCCceeEEEEecC
Q 014631 286 GYLNI---------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR-KPEGSMFVMVKLN 355 (421)
Q Consensus 286 ~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~ 355 (421)
..... ..+.......++..++... .+.++.. ++..++++++.+.|+++||+.++. .+....++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~-~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKRW-DEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHHH-HHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence 43321 0111122233333333321 1223332 333445578899999988887331 2334456655554
Q ss_pred cccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHH
Q 014631 356 LSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 356 ~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~ 414 (421)
.... .......++...| +++||.+. ..+...++|++.. .++++++.++++|+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~---~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGI---KPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CcchhhhhccccchhHHHHH-HHcCceEE---cCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 1100 0001223566666 56699853 2234568999984 79999999999998764
No 151
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.97 E-value=1.1e-27 Score=229.19 Aligned_cols=332 Identities=18% Similarity=0.165 Sum_probs=228.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
++++++|+.++ |.++..+|++++++.+++++.... .++....+.++++.++++++ .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g--------~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHG--------KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhC--------CCcEEEeC
Confidence 46789998887 667778999999999999863211 11112234678888888772 24555555
Q ss_pred CHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631 117 GCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~ 190 (421)
+|++++..++..+.. +||.|++....|.+....+...|.++..++. .|++.+++.+. ++++++++++
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 556788888887654 7787877777887777777878887766653 25666666553 3567788889
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++|++|.+.+ +++|.++|+++|+++|+||+|+...++ |.+......+. .+..++++||||.|+++| ||+++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~-~~~~i~~~tlsKa~g~~G---G~~~~ 258 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLA-DRLTIIEGTLAKAFGVMG---GYITG 258 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCC-CCCeEEEEeCchhhcccC---ceeeC
Confidence 9999999966 888899999999999999999844433 22221111111 123577789999998888 99887
Q ss_pred eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
+ +++.+.+..... .+.+.++..+.++.++|+...+. . ..+.+++++++++.+.|+++ ++.++ .+.
T Consensus 259 ~--------~~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~-~-~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~ 326 (406)
T PRK13393 259 S--------AALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS-S-AERERHQDRVARLRARLDKA-GIPHL-PNP 326 (406)
T ss_pred C--------HHHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC-H-HHHHHHHHHHHHHHHHHHHc-CCCcC-CCC
Confidence 4 356666655432 23456667777777777643222 1 23456778899999999876 77633 444
Q ss_pred ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+.++.+.++.. ....++...|++++||.+.++..+.. ...+|++++ ++++|+++++++|.++++++
T Consensus 327 -~~i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 327 -SHIVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred -CCeEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 44555544321 02456666666657999998755432 367999998 89999999999999988764
No 152
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=9e-28 Score=228.02 Aligned_cols=336 Identities=15% Similarity=0.197 Sum_probs=231.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|+.++||..|....+.+ ..+|.+.+++.+++++.. .. ......++++.+++++.+..+ .+.++++++|++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG-~~~p~v~~a~~~~~~~~~--~~-~~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~ 97 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLG-HCHPTVTKAVQEQLDDIW--HV-SNLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE 97 (377)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--cc-ccccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence 3488999999997655555 488999999999998632 11 223457899999999976433 258999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHh-hcCceeE---eeeccCCCCcc--CCHHHHHhhhccCceEEEEeCCC
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANAR-HTRLEIR---HFDLLPEKGWE--VDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~-~~g~~~~---~~~~~~~~~~~--~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
|+..+++... .+| ++|++.+++|++...... ..+.... ..+..++..+- -|++++++.+.++++++++..++
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~ 177 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence 9999998643 344 679999999987643322 2221110 11111110000 17889999888778888777778
Q ss_pred CCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+++|.. .+++.+++|.++|++||+++|+||+|.++.+.|... .....+...++ .++||.++ +|+|+||++++
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~-- 250 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGK-- 250 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEc--
Confidence 888876 578999999999999999999999999887766532 22222222222 37999987 89999999985
Q ss_pred CcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCCccccCCCCc
Q 014631 272 SGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPCITCPRKPEG 346 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~~~~~~~~~ 346 (421)
+++.+.+.... ..+.+++++.+.++.++|+.... ++..++++++.+++.+.|++ ++.+..+ . ..
T Consensus 251 ------~~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~-~~ 319 (377)
T PRK02936 251 ------KELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIKQ---PSFLEEVQEKGEYFLQKLQEELEHLECVKNI-R-GK 319 (377)
T ss_pred ------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-e-ec
Confidence 35667665443 23446789999999999875321 23334555555566655554 3333211 2 34
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
|+++|+.++. +...+.. .+.++||.+.|+. .+++|++++ .+++++++++++|.+++
T Consensus 320 g~~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 320 GLMIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred ceEEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 6889988863 2344544 5577899998853 478999974 88999999999998763
No 153
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.97 E-value=1.2e-27 Score=228.78 Aligned_cols=337 Identities=15% Similarity=0.139 Sum_probs=232.5
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCC--CC------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCY--SP------SVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y--~~------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.++|+.+.+. |.++.+.+++.+.+........ .. ...+.++|+.+++++ ++++++|++++|
T Consensus 4 ~~yld~aa~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g 72 (402)
T TIGR02006 4 PIYLDYAATT-----PVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSG 72 (402)
T ss_pred cEEeeCCcCC-----CCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 4788888755 6788999999888753211111 00 123556778888877 467889999999
Q ss_pred HHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 118 CKQAIQVILTVLA----RPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
++++++.++.++. ++||+|+++.++|+++...+ +..|.+++.++.++ ++.+|++++++.+.++++++++++
T Consensus 73 ~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~v~~ 150 (402)
T TIGR02006 73 ATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKS--NGLIDLEELKAAIRDDTILVSIMH 150 (402)
T ss_pred HHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEEC
Confidence 9999999887653 68999999999998765444 44688998888653 456899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
++||||... ++++|.++|+++|+++++|++++. |.....+...+. .+++.|++|.+|.+| +|++++++
T Consensus 151 ~~n~tG~~~---~~~~I~~l~~~~g~~livD~a~a~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~ 218 (402)
T TIGR02006 151 VNNEIGVIQ---DIAAIGEICRERKVFFHVDAAQSV----GKIPINVNELKV---DLMSISGHKIYGPKG--IGALYVRR 218 (402)
T ss_pred CCcCceecc---cHHHHHHHHHHcCCEEEEEcchhc----CCcccCccccCC---CEEEEehhhhcCCCc--eEEEEEcc
Confidence 999999995 478999999999999999999976 322223333332 277788999876556 89998874
Q ss_pred CCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-e-
Q 014631 271 PSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-S- 347 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-~- 347 (421)
.....-.+ +....... ....++++.....++..+++.. ..+++...++.+++++++.+.|++++++.+...+.. .
T Consensus 219 ~~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p 296 (402)
T TIGR02006 219 KPRVRLEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVP 296 (402)
T ss_pred CCCCCCCc-eecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 32110000 10000000 1122466777777777777642 346788888999999999999998888763211111 1
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHHH
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEEG 406 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~~ 406 (421)
....+.|+.. +..++...+ +++.+..|..+.. .+++|+|++ ++++|++++
T Consensus 297 ~~~~v~f~~~------~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l 367 (402)
T TIGR02006 297 GNLNVSFNYV------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYA 367 (402)
T ss_pred CeEEEEEeCc------CHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHH
Confidence 1112334321 233443332 4888888876532 368999998 899999999
Q ss_pred HHHHHHHHHHhh
Q 014631 407 LGRIKAFCQRHA 418 (421)
Q Consensus 407 ~~~l~~~~~~~~ 418 (421)
++.|.++++.++
T Consensus 368 ~~~l~~~~~~~~ 379 (402)
T TIGR02006 368 VKLVKSAIDKLR 379 (402)
T ss_pred HHHHHHHHHHHH
Confidence 999999987753
No 154
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.97 E-value=3.2e-27 Score=226.26 Aligned_cols=330 Identities=19% Similarity=0.217 Sum_probs=225.1
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
+..+++++.|.|. ++.|+.+.++..+. .. ...|.+ ..|.+++++++++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 5577999999976 46667776666555 21 234554 678999999999999998874 4456777765
Q ss_pred HH-HHHHHHHHHhcCC--CCeEEEcCCCCcchHHHHhhcC----ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 118 CK-QAIQVILTVLARP--GANILLPKPGFPLYEANARHTR----LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 118 ~~-~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g----~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
++ ++...+..++..+ ||+|+++++.|.++...+...| .+++.++.++ ++.+|++++++.+.++++++++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence 44 4545555555665 9999999999999988887777 8888888643 346899999999988899999988
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEE
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWL 266 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~ 266 (421)
|+ |+|.+. +.+++|.++|++||+++|+|++|..+.. ......++ ..+++.|+||++ +| |+++|++
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~~---~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEYG---ADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHcC---CCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899983 4579999999999999999998865321 11111222 348889999997 54 7889999
Q ss_pred EeeCCCcchhHHHHHHHHhhh-----------------------------c-ccccCCchHHHHHHHHHhhccchhHHHH
Q 014631 267 VTSDPSGILQELRIVDSIKGY-----------------------------L-NISSGPATFVQGAVPQIFKNTKEDFFSK 316 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~-----------------------------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (421)
++++ ++.+.+... . ....+.+.....++...+......++++
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~ 308 (398)
T cd00613 237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE 308 (398)
T ss_pred EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence 9863 233332110 0 0011222333333333333334567888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
.+++++++++++.+.|+++++.. .+.+..+ +++.++... ..+..+++..| .++||.+.... ....+.+|+
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~---~~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi 380 (398)
T cd00613 309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY---GIRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc---hHHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence 89999999999999999874443 2333333 455554210 01345666665 56798764422 123578999
Q ss_pred Eec--CCHHHHHHHHHHH
Q 014631 395 TFA--IEPSALEEGLGRI 410 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l 410 (421)
+++ ++++|++++++.|
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 998 8999999998864
No 155
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.97 E-value=5.2e-28 Score=214.08 Aligned_cols=310 Identities=21% Similarity=0.296 Sum_probs=200.2
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH-HH-HHhc------------CCCCeEEEcCCCC
Q 014631 79 FDCY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV-IL-TVLA------------RPGANILLPKPGF 143 (421)
Q Consensus 79 ~~~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~-~~-~~l~------------~~gd~Vl~~~p~y 143 (421)
..+| +...|++++|+..++++ ++++++|++..+++-.+.. ++ ++++ ++.-+.+++.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 4589 89999999999999999 6889999997766544322 11 2221 1234889999999
Q ss_pred cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCC--CCCcccccCHHHHHHHHHH-HHhcCcEE
Q 014631 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNP--GNPCGNVFTYQQLQKIAEK-ARKLGIMV 218 (421)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~l 218 (421)
.-+..+++.+|++.+.||..++ ++|+|.+++++. +..|++ .|.| +||||+++|.+.+++++.+ +...++.|
T Consensus 135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGi-WcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI 210 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGI-WCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRI 210 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEE-EE-SSS-TTT-----HHHHHHHHHS--SSTT-EE
T ss_pred hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceE-EeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEE
Confidence 9999999999999999998654 589999999883 445665 5556 8999999999999999998 34679999
Q ss_pred EEcccccccccCCC-Cccc---c----cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c
Q 014631 219 ISDEVYDHLTFGST-PYVR---M----GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N 289 (421)
Q Consensus 219 i~De~~~~~~~~~~-~~~~---~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~ 289 (421)
+.|++|+...+.+. .... + ...+..++++.+.|.||. ..+|.+++++..+. +-++.+.+.. .
T Consensus 211 ~WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~ 281 (425)
T PF12897_consen 211 FWDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSV 281 (425)
T ss_dssp EEE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHH
T ss_pred EeecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcC
Confidence 99999998776332 2111 1 122456789999999999 79999999999863 3344444443 3
Q ss_pred cccCCchHHHHHHHHHhhccc---hhHHHHHHHHHHHHHHHHHHHhhc-CC---CccccCCCCceeEEEEecCcccccCC
Q 014631 290 ISSGPATFVQGAVPQIFKNTK---EDFFSKIVDILRDTADICYDRIKE-IP---CITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 290 ~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~l~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+.++..+.|..-..++.+.. ..+++++++.++-+.+.+.+.|++ +. ++..+..|.||+|+++.....
T Consensus 282 ~tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~G----- 356 (425)
T PF12897_consen 282 QTIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLDG----- 356 (425)
T ss_dssp H-S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEESTT-----
T ss_pred ceeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCCC-----
Confidence 456899999999999997632 567788888888888888887774 32 344477999999999988753
Q ss_pred CChHHHHHHHHhhcCeeEEe-CCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLP-GMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~-g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~ 414 (421)
...-+.+++++.||.+.| |..|-. ...|||+++ .+.|+++.+++.+.-++
T Consensus 357 --~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv 413 (425)
T PF12897_consen 357 --TAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCV 413 (425)
T ss_dssp ---HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHH
Confidence 344455688999999999 666522 468999999 67899999999887654
No 156
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=2e-27 Score=226.48 Aligned_cols=335 Identities=17% Similarity=0.150 Sum_probs=225.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++||..|...... ...+|.+.+++.+++++.... .+.......+|.+.++++. + .+.++++++|+
T Consensus 37 ~~G~~~lD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs 107 (396)
T PRK04073 37 PEGNRYMDMLSAYSAVNQ-GHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT----G----KDMVLPMNTGA 107 (396)
T ss_pred CCCCEEEEcCCCHHhccC-CCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC----C----CCeEEEcCChH
Confidence 358889999877544322 257899999999998864221 1111222245555555543 2 36899999999
Q ss_pred HHHHHHHHHhcC---------CC-CeEEEcCCCCcchHHHHhh-cCceeE---eeeccCC---CCccCCHHHHHhhhccC
Q 014631 120 QAIQVILTVLAR---------PG-ANILLPKPGFPLYEANARH-TRLEIR---HFDLLPE---KGWEVDLDGLEALADEN 182 (421)
Q Consensus 120 ~al~~~~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~-~g~~~~---~~~~~~~---~~~~~d~e~l~~~~~~~ 182 (421)
+|+..+++.... +| ++|+..+.+|++....+.. .+.... .-+..+. -.+ .|++++++.+.++
T Consensus 108 eA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~i~~~ 186 (396)
T PRK04073 108 EAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY-GDLEALKAAITPN 186 (396)
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC-CCHHHHHHhcccC
Confidence 999999887631 34 6888988889876543322 221100 0000000 011 1788999988878
Q ss_pred ceEEEEeCCCCCcccccCHH-HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631 183 TVAMVIVNPGNPCGNVFTYQ-QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 261 (421)
++++++..++||+|..++++ .+++|.++|++||+++|+||+|+++.+.|..+. ....+...+ +.++||.++++|+
T Consensus 187 ~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pd---i~~~sK~lg~gg~ 262 (396)
T PRK04073 187 TAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPD---MYILGKALGGGVF 262 (396)
T ss_pred eEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCC---EEEecccccCCCC
Confidence 88777777799999998764 699999999999999999999998876654321 112222222 3368999998889
Q ss_pred eEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--CCc
Q 014631 262 RLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCI 338 (421)
Q Consensus 262 r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~ 338 (421)
|+||++++ +++++.+.... ..+.+.+++.+.++.++|+...+. ...++.+++++++.+.|+++ +.+
T Consensus 263 ~ig~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i 331 (396)
T PRK04073 263 PISCVAAN--------RDILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMI 331 (396)
T ss_pred cceEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcc
Confidence 99999985 35777665432 234567889999988888642222 23455666788888888765 333
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
. . .+..|.+++++++. +..++..++ .++||.+.+.. .+++|++++ .++|++++++++|++++
T Consensus 332 ~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 332 K-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred c-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 3 2 12336678887753 355676665 56799997632 468999975 89999999999999875
No 157
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=1.7e-27 Score=229.27 Aligned_cols=346 Identities=18% Similarity=0.197 Sum_probs=229.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.++|||..|......+ ..+|.+.+++.+++... ..|....+..++...+++.+.+.+| ...+++++++|+++|
T Consensus 34 dG~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~--~~~~~v~~~~sgsea 108 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLG-HNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTP--EGLDKVFFVNSGTEA 108 (413)
T ss_pred CCCEEEEcCccHHhhccC-CCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHHH
Confidence 488999999875432222 37889999999999763 3444332334555555555555444 357899999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC-------------ceeEeeeccCC----CCccCCHHHHHhhhcc-
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANARHTR-------------LEIRHFDLLPE----KGWEVDLDGLEALADE- 181 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-------------~~~~~~~~~~~----~~~~~d~e~l~~~~~~- 181 (421)
+..+++.+. .++++|++.+++|+++...+...+ .++..+|.+.. ..+..|++.+++.+++
T Consensus 109 ~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 188 (413)
T cd00610 109 VEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH 188 (413)
T ss_pred HHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC
Confidence 999998874 568999999999998755443322 12344544311 1244588999888865
Q ss_pred -CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631 182 -NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 182 -~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
+...+++++| ++++|..+ +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+ +.|+||.++.
T Consensus 189 ~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~~ 264 (413)
T cd00610 189 PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLGG 264 (413)
T ss_pred CCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEcccccC
Confidence 3444556666 66779876 66779999999999999999999999875544421 1122222212 3488999865
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHH--hhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSI--KGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
|+|+||++++ +++++.+ .... ..+.+.+++.+.++.++++...+ .+..++++++.+++.+.|+++
T Consensus 265 -g~~~g~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~ 332 (413)
T cd00610 265 -GLPLGAVLGR--------EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLREL 332 (413)
T ss_pred -ccccEEEEEc--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHH
Confidence 7999999985 3567765 2222 23456778888888777764222 345566677777777777654
Q ss_pred C---CccccCCCCceeEEEEecCccccc---CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 336 P---CITCPRKPEGSMFVMVKLNLSLLE---GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 336 ~---g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
. ++... ....|.++++.++..... .......+... +.++||.+.|+. .+.+|++++ ++++++++++
T Consensus 333 ~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 333 AEKHPLVGD-VRGRGLMIGIELVKDRATKPPDKELAAKIIKA-ALERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HhhCCcEEE-eecCceEEEEEEecCCCcCCcchHHHHHHHHH-HHHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence 1 11101 123467788877642100 00123455555 467799999975 578999887 6899999999
Q ss_pred HHHHHHH
Q 014631 408 GRIKAFC 414 (421)
Q Consensus 408 ~~l~~~~ 414 (421)
++|++++
T Consensus 407 ~~l~~~l 413 (413)
T cd00610 407 DALDEAL 413 (413)
T ss_pred HHHHHhC
Confidence 9998763
No 158
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=6.3e-27 Score=222.26 Aligned_cols=339 Identities=14% Similarity=0.110 Sum_probs=227.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
..+.||++--. .. .|+++++.+++.+...... ...+.....+.++|+.+|++++ + ++++++
T Consensus 17 ~~~~~~~~~~~---~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g------~--~~~~~~ 84 (387)
T PRK09331 17 EEEFINLDPIQ---RG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLG------M--DEARVT 84 (387)
T ss_pred cccccccChhh---cC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhC------C--CcEEEe
Confidence 45667775332 22 3788999999999875311 0111123346899999999983 2 468889
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------CceEEEE
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------NTVAMVI 188 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~~~~i~~ 188 (421)
+|+++++..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++++++.+++ +++++++
T Consensus 85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999999999999999998888888999999999874334567899999998753 5788999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++|+|+||.. .++++|.++|+++|+++|+|++|+... ...+...++. .++++|+||+++ ++.++||+++
T Consensus 165 ~~~~~~tG~~---~~l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~ 233 (387)
T PRK09331 165 THVDGNYGNL---ADAKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT 233 (387)
T ss_pred ECCCCCCccc---ccHHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence 9999999988 569999999999999999999998632 1122223332 377899999976 4558999998
Q ss_pred eCCCcchhHHHHHHHHhhhcc---------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 269 SDPSGILQELRIVDSIKGYLN---------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
++ ++++.+..... ..++.+.....++...++. ..... +..++..++.+++++.|++++|+.
T Consensus 234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~-~~~~~-~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPH-VVERV-KRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence 52 45555433211 1112222222322333322 11222 234455677788999999998988
Q ss_pred ccCC-CCceeEEEEecCccc---ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHHHHHH
Q 014631 340 CPRK-PEGSMFVMVKLNLSL---LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-AIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 340 ~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l~~~~ 414 (421)
++.. +....+..+..+... .........+...| +++||...+. +....+|+.. +.++++++++++.|++++
T Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 4311 233444444444110 00011223455555 6779984332 2245677776 479999999999999998
Q ss_pred HHhh
Q 014631 415 QRHA 418 (421)
Q Consensus 415 ~~~~ 418 (421)
+++.
T Consensus 380 ~~~~ 383 (387)
T PRK09331 380 EKYG 383 (387)
T ss_pred HhcC
Confidence 7653
No 159
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.96 E-value=4.3e-27 Score=216.33 Aligned_cols=328 Identities=20% Similarity=0.195 Sum_probs=246.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
+++++||+.++ |.++..+|.++++..+.+++... .-++...-+.+|++.+|+|++ .+..++.+
T Consensus 38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g--------~e~al~f~ 106 (388)
T COG0156 38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLG--------AEAALLFS 106 (388)
T ss_pred CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhC--------CCcEEEEc
Confidence 57899999998 77788899999999999987311 123444457899999999984 34566666
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---C---ceEEEEeC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---N---TVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~---~~~i~~~~ 190 (421)
++-.|+..++.+|++++|.|+.+.-.|.+....++..+++.+.+.++ |++.|++.+.+ . .+.|+...
T Consensus 107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHN-------DLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecCC-------CHHHHHHHHHhhhccCCCceEEEEec
Confidence 66778888899999999999999999999999999999999988763 77888888755 2 34555556
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc--cccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM--GVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
.-...|.+ .+|++|++++++||.++++||+|+...++..+.... ..+...+..|.++||||+||..| ||+.+
T Consensus 180 VfSMdGdi---ApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g 253 (388)
T COG0156 180 VFSMDGDI---APLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG 253 (388)
T ss_pred cccCCCCc---CCHHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence 66789998 559999999999999999999999988875443333 33333445789999999999888 99998
Q ss_pred eCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 269 SDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
+ ..+.+.+..... ++.+.+|...+++.++++. .....+.+++++++...+.+.++.. ++. . .+.
T Consensus 254 ~--------~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~--l~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~s 320 (388)
T COG0156 254 S--------AALIDYLRNRARPFIFSTALPPAVAAAALAALRI--LEEGPERRERLQELAAFFRSLLKAL-GLV-L-LPS 320 (388)
T ss_pred c--------HHHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCC
Confidence 6 357777766532 2335555555566666764 2234566778888888888666655 655 2 466
Q ss_pred ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.+.+..+.+.... ...++...++++ ||.+.+..++..+ ..+|+|++ +++++|+.+++.|.++
T Consensus 321 ~s~I~pv~~gd~~-----~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 321 ESPIIPVILGDEE-----RALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCeeeeEeCCHH-----HHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 6667766665431 255666666665 9999988777653 67999997 8999999999998875
No 160
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=6e-27 Score=221.05 Aligned_cols=319 Identities=16% Similarity=0.131 Sum_probs=219.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+++.+.+++.+.+.. ....|. .-..++|+.++++++ .+.+...|++++|+++++..++..+..+||++++..
T Consensus 9 ~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~~----~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~ 81 (355)
T TIGR03301 9 STSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALAG----GDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLI 81 (355)
T ss_pred CCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHhc----CCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEEC
Confidence 4567787777763221 111232 224567777777763 222223688899999999999999988888877766
Q ss_pred CCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 141 PGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 141 p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
+.+++ +...++..|.+++.++.+. ++.+|++++++.+++ +.+.+++++++||||...+ +++|.++|++||+
T Consensus 82 ~~~~~~~~~~~a~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~~~~ 156 (355)
T TIGR03301 82 NGAYGERLAKICEYLGIPHTDLNFSE--YEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARSHGA 156 (355)
T ss_pred CCchhhHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHHcCC
Confidence 65554 3567788899999888643 356899999998864 3456778889999999854 8899999999999
Q ss_pred EEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------
Q 014631 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------- 287 (421)
Q Consensus 217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------- 287 (421)
++|+|++++... ...++..++ ..++++|++|++ +++| +||+++++ ++++.+...
T Consensus 157 ~livD~~~s~g~----~~~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~~~~ 219 (355)
T TIGR03301 157 VLIVDAMSSFGA----IPIDIEELD---VDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLYLDL 219 (355)
T ss_pred EEEEEeccccCC----cccchhhcC---ccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCceeeH
Confidence 999999877532 122333332 337789999986 4455 79999863 344444311
Q ss_pred ----------cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCC--CceeEEEEec
Q 014631 288 ----------LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKP--EGSMFVMVKL 354 (421)
Q Consensus 288 ----------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~ 354 (421)
.....+++...+.++.++++...+. ++++..++++++++++.+.|+++ |+.++..+ .++.++|+.+
T Consensus 220 ~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 298 (355)
T TIGR03301 220 YDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVSFLY 298 (355)
T ss_pred HHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEEEEC
Confidence 1112356777777777777643333 37888889999999999999887 77633222 2345677777
Q ss_pred CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
+... ..+..++..+ +.++||.+.+|..+.. +++||++. +++++++++++.|++++
T Consensus 299 ~~~~---~~~~~~~~~~-l~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 299 PDDP---DFDFDDFYQE-LKERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CCCC---cchHHHHHHH-HHHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 6311 0123455554 5778999999875543 79999985 68999999999998753
No 161
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=8.1e-27 Score=222.90 Aligned_cols=336 Identities=18% Similarity=0.198 Sum_probs=226.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++||..|....+.+. .+|.+.+++.+++++... .......-..++.+.++++. + .+.++++++|+
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~sGs 107 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHISNVFTNEPALRLAKKLIDAT----F----AERVFFANSGA 107 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCcccCccCCHHHHHHHHHHHhhC----C----CCEEEEeCchH
Confidence 34888999988754444444 889999999999876321 11111111234444444432 2 36899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhh
Q 014631 120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+|+..+++.... .+ ++|+..+.+|++....+...+.. +..++. -|++++++.
T Consensus 108 eA~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 180 (403)
T PRK05093 108 EANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPF-------NDLAAVKAV 180 (403)
T ss_pred HHHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCC-------CCHHHHHHH
Confidence 999999986521 23 57888898998875433222111 111111 178899988
Q ss_pred hccCceEEEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 179 ADENTVAMVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
+.+++++|++. |.||+|-.+ +.+.+++|.++|++||+++|+||+|+++.++|... +....+.... +.||||.+
T Consensus 181 l~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l 255 (403)
T PRK05093 181 IDDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKAL 255 (403)
T ss_pred hcCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEecccc
Confidence 87666666554 877777654 88999999999999999999999999987777532 2222221111 45899998
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+ +|+|+||++++ +++++.+.... ..+.+.+++.|.++.++|+... -.+..++++++++++.+.|+++
T Consensus 256 ~-~G~rig~vv~~--------~~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~ 323 (403)
T PRK05093 256 G-GGFPIGAMLTT--------AEIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKI 323 (403)
T ss_pred c-CCcceEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHH
Confidence 7 89999999996 35777776532 2345678899999888776422 1344577888888888888875
Q ss_pred C-Cccc-cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631 336 P-CITC-PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 336 ~-g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
. .... ...+..|.++|+.++.... ....+++..+ .++||.+.|+. .+++|++++ .+++++++++++|.
T Consensus 324 ~~~~~~~~~~~~~G~~~~~~l~~~~~---~~~~~~~~~l-~~~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~ 395 (403)
T PRK05093 324 NQKYGVFSEIRGMGLLIGAELKPQYK---GRARDFLNAA-AEEGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFE 395 (403)
T ss_pred HhhCCCeEeEeeCceEEEEEecCcch---hHHHHHHHHH-HHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHH
Confidence 1 1111 1234568899988863210 1245677666 45699998742 478999876 68999999999999
Q ss_pred HHHHHh
Q 014631 412 AFCQRH 417 (421)
Q Consensus 412 ~~~~~~ 417 (421)
+++.++
T Consensus 396 ~~l~~~ 401 (403)
T PRK05093 396 KAVAKV 401 (403)
T ss_pred HHHHHh
Confidence 998764
No 162
>PRK14012 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.2e-26 Score=222.00 Aligned_cols=336 Identities=16% Similarity=0.188 Sum_probs=225.4
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHh--cC--CCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVR--SA--EFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~--~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.++|+.+.+. |.++.+.+++.+.+. .. +..... ......++|+.+++++ +.++++++++
T Consensus 4 ~iyld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~ 72 (404)
T PRK14012 4 PIYLDYSATT-----PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFT 72 (404)
T ss_pred eEEecCcCCC-----CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEe
Confidence 3778888755 678889999988875 21 111000 0122457788888887 4567889999
Q ss_pred CCHHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631 116 AGCKQAIQVILTVLA----RPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 116 ~g~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~ 188 (421)
+|+|++++.++.++. ++||.|+++.++|++....+. ..|++++.++.++ ++.+|++++++.++++++++++
T Consensus 73 ~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~ 150 (404)
T PRK14012 73 SGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSI 150 (404)
T ss_pred CCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEE
Confidence 999999999887763 789999999999987755443 3599998888653 4568999999999989999999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++++||||.++ ++++|.++|+++|+++|+|++++. |.....+...+.+ +++.|++|.++ |+ ++|++++
T Consensus 151 ~~~~n~tG~~~---~~~~I~~la~~~g~~vivD~a~~~----g~~~~~~~~~~~D---~~~~s~~K~~g-p~-g~G~l~~ 218 (404)
T PRK14012 151 MHVNNEIGVIQ---DIAAIGEICRERGIIFHVDAAQSV----GKVPIDLSKLKVD---LMSFSAHKIYG-PK-GIGALYV 218 (404)
T ss_pred ECcCCCccchh---hHHHHHHHHHHcCCEEEEEcchhc----CCcccCcccCCCC---EEEEehhhccC-CC-ceEEEEE
Confidence 99999999995 478999999999999999999986 3222233333322 66779999764 33 5899988
Q ss_pred eCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-C---
Q 014631 269 SDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK-P--- 344 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~--- 344 (421)
++.......+.+...-.......++++.....++.+++... .....+..++.+++++++.+.|++++++..... +
T Consensus 219 ~~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~ 297 (404)
T PRK14012 219 RRKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRV 297 (404)
T ss_pred ecCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccC
Confidence 75321100000000000000112344555555555555432 234566778888999999999988877763211 1
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHH
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSAL 403 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l 403 (421)
.....+++.+. +..++... ++ ++.|.+|..|.. .+.+|++++ ++++|+
T Consensus 298 ~~~~~~~~~~~--------~~~~~~~~-l~--~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dv 366 (404)
T PRK14012 298 PGNLNVSFNYV--------EGESLIMA-LK--DLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEI 366 (404)
T ss_pred CCEEEEEEeCc--------CHHHHHHh-CC--CeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHH
Confidence 11223444432 12334433 33 777777755422 367999998 789999
Q ss_pred HHHHHHHHHHHHHhh
Q 014631 404 EEGLGRIKAFCQRHA 418 (421)
Q Consensus 404 ~~~~~~l~~~~~~~~ 418 (421)
+++++.|++++++++
T Consensus 367 d~~~~~l~~~~~~~~ 381 (404)
T PRK14012 367 DYAIELVRKSIGKLR 381 (404)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999987753
No 163
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=1.9e-26 Score=218.96 Aligned_cols=324 Identities=17% Similarity=0.126 Sum_probs=223.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCeE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGANI 136 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~V 136 (421)
++++.+.+++.+.+..... ......+..++.+.+.+++.+.+| .++.++++++|+++++..++..+.+ +||+|
T Consensus 31 ~~~~~~~~a~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~v 107 (371)
T PRK13520 31 EPHPIARKAHEMFLETNLG-DPGLFPGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEKPNI 107 (371)
T ss_pred CchHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCCceE
Confidence 4567888999888865211 111112334444455555554444 4456788999999999998877643 57899
Q ss_pred EEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 137 LLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 137 l~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
++.+++|.++...++..|.+++.++.+. ++.+|++++++.++++++.++++.++|+||...+ +++|.++|+++|+
T Consensus 108 l~~~~~h~s~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~~g~ 182 (371)
T PRK13520 108 VVPESAHFSFDKAADMLGVELRRAPLDD--DYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALENGI 182 (371)
T ss_pred EecCcchHHHHHHHHHcCceEEEecCCC--CCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHcCC
Confidence 9999999999998898999999888643 4568999999999888888888888999999955 8888999999999
Q ss_pred EEEEcccccccccCC-CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-----
Q 014631 217 MVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI----- 290 (421)
Q Consensus 217 ~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~----- 290 (421)
++++|++|+.+...- .....+ .....+-..+..|.+|+ +.+|.++|++++.+ +++.+.+......
T Consensus 183 ~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~-------~~~~~~l~~~~~~~~~~~ 253 (371)
T PRK13520 183 FLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRD-------ESYLDALAVDTPYLTSKK 253 (371)
T ss_pred CEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcC-------HHHHHhhcccCccccCCC
Confidence 999999998754210 110011 11111112444578896 67778899888753 2344444311110
Q ss_pred ----ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChH
Q 014631 291 ----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDM 366 (421)
Q Consensus 291 ----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (421)
.++.+.....++..+++......+++..++..++++++.+.|+++ |+.++..|.. .++.+.++ +..
T Consensus 254 ~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~-~~v~~~~~--------~~~ 323 (371)
T PRK13520 254 QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVL-NIVAFDDP--------NPD 323 (371)
T ss_pred CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCc-eEEEEecC--------CHH
Confidence 122344556666667765445667888899999999999999987 7762324443 35555554 345
Q ss_pred HHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 367 EFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 367 ~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
++...| .++||.+.++. ..+.+|+|++ ++++|++++++.|+++++
T Consensus 324 ~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 324 EVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred HHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 666665 55699987653 2468999987 789999999999998764
No 164
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.7e-26 Score=218.28 Aligned_cols=293 Identities=14% Similarity=0.127 Sum_probs=210.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCC--CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSP--DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~ 163 (421)
+.++|+.++++++ +++ +.|++|+|+|++++.++.++..+||.+++..+++++. ...++..|.+++.++.+
T Consensus 37 ~~~~r~~la~l~~------~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~~~~~a~~~g~~~~~v~~~ 110 (363)
T TIGR02326 37 VEQIRQQLLALAT------AEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGARIVQIAEYLGIPHHVVDTG 110 (363)
T ss_pred HHHHHHHHHHHhC------CCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC
Confidence 4566777777763 443 4799999999999999999988888887776666554 46678899999998875
Q ss_pred CCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 164 PEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
+ ++.+|++++++.++. +++.+.+++++||||+.+| +++|.++|+++|+++|+|++++. |....++..++
T Consensus 111 ~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~~~g~~livD~~~~~----g~~~~~~~~~~ 181 (363)
T TIGR02326 111 E--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAHRHGKVTIVDAMSSF----GGIPIDIAELH 181 (363)
T ss_pred C--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHHHcCCEEEEEccccc----cCcccchhhcC
Confidence 3 446899999998864 3466788899999999976 78999999999999999998875 33233444444
Q ss_pred CCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------cccccCCchHHHHH
Q 014631 242 STVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------LNISSGPATFVQGA 301 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~ 301 (421)
.+ ++++|++|+++ .+| +|++++++ ++.+.+... ....++++...+.+
T Consensus 182 ~D---~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~a 248 (363)
T TIGR02326 182 ID---YLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHA 248 (363)
T ss_pred cc---EEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHH
Confidence 33 77899999863 345 79999863 233332110 01123567778888
Q ss_pred HHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCe
Q 014631 302 VPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV 378 (421)
Q Consensus 302 ~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv 378 (421)
+.++++.... .+++++.++++++++++.+.|+++ |+.++..+ ..+...++.++... . .+..++...| +++||
T Consensus 249 l~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~v~~~L-~~~gi 323 (363)
T TIGR02326 249 FAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPIITSFYSPEDP--D-YRFADFYQRL-KEQGF 323 (363)
T ss_pred HHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceEEEEECCCCC--C-CCHHHHHHHH-HHCCE
Confidence 7777765333 357788899999999999999887 77633222 23445667665310 0 1344555554 67799
Q ss_pred eEEeCCCCCCCCeEEEEe-c-CCHHHHHHHHHHHHHHH
Q 014631 379 IVLPGMAVGMKNWLRITF-A-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 379 ~v~~g~~~~~~~~iRi~~-~-~~~e~l~~~~~~l~~~~ 414 (421)
.+.+|..+. .+++|+++ + ++.++++++++.|++++
T Consensus 324 ~v~~g~~~~-~~~iRi~~~~~~~~edv~~~l~~l~~~l 360 (363)
T TIGR02326 324 VIYPGKVSQ-VDCFRIGNIGEVDAADITRLLTAIGKAM 360 (363)
T ss_pred EEECCcCCC-CCEEEEecCCCCCHHHHHHHHHHHHHHh
Confidence 999997653 57899996 4 79999999999999876
No 165
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.96 E-value=1.5e-27 Score=224.20 Aligned_cols=310 Identities=16% Similarity=0.132 Sum_probs=222.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----------
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR---------- 131 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~---------- 131 (421)
++..+.+.+...++... ..|....+..++++.+++|+.+.+|.+.+++++++|+|+|+++..++.++..
T Consensus 11 ~~~~~~~~~~~~~n~~~-~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~ 89 (345)
T cd06450 11 PPALLLEMLTSAKNAID-FTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGG 89 (345)
T ss_pred HHHHHHHHHHHhcCCCC-cccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhccc
Confidence 34555666666655433 4588888899999999999999888664566899999999999999988742
Q ss_pred --CC--CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCH
Q 014631 132 --PG--ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 132 --~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~ 201 (421)
++ +.|++++++|.++...+...|.+++.++.+++ +.+|++++++.+.+ +++++++++|+||||.+
T Consensus 90 ~~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~--- 164 (345)
T cd06450 90 GRGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAI--- 164 (345)
T ss_pred ccccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCC---
Confidence 23 47888999999998888888999999987543 36899999998876 67788899999999998
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc-cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.++++|.++|+++|+++++|++|+.+.......... .... +-..+..|+||++ .++.++|++++
T Consensus 165 ~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~l-~~p~g~g~~~~------------ 229 (345)
T cd06450 165 DPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKYG-LVPLGCSAVLV------------ 229 (345)
T ss_pred CCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHhh-CCCcchHHHHH------------
Confidence 668999999999999999999998866432111110 1111 1124566999984 45567888654
Q ss_pred HHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 281 VDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
. ...+.++...+. ..+++++.++..++++++.+.|.+++++.++..+..+ ++.+.++.....
T Consensus 230 -~-------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~-iv~f~~~~~~~~ 291 (345)
T cd06450 230 -R-------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLS-LVCFRLKPSVKL 291 (345)
T ss_pred -H-------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCcee-EEEEEECCcchh
Confidence 1 333334334443 4667888899999999999999998888744334444 444555431000
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C-CHHHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I-EPSALEEGLGRIKA 412 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~-~~e~l~~~~~~l~~ 412 (421)
..+..++...| .++|+.+.++..+....++|++++ + +.++++++++.|++
T Consensus 292 -~~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 292 -DELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred -hHHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 00234565555 666666666555545678999997 3 88999999999875
No 166
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.96 E-value=1.9e-26 Score=220.08 Aligned_cols=345 Identities=18% Similarity=0.201 Sum_probs=230.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|..++||..|....+.+. .+|.+.+++.+++.+... ..|. .....++.+.++++. + .++++++++|
T Consensus 36 ~dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~-~~~~~~la~~l~~~~----~----~~~v~~~~sG 105 (406)
T PRK12381 36 QQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYT-NEPVLRLAKKLIDAT----F----ADRVFFCNSG 105 (406)
T ss_pred CCCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccC-CHHHHHHHHHHHhhC----C----CCeEEEcCCc
Confidence 34888999988754444443 489999999999876311 1121 111234555555543 2 4699999999
Q ss_pred HHHHHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCC--CCccCCHHHHHhhhccCce
Q 014631 119 KQAIQVILTVLAR--------PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPE--KGWEVDLDGLEALADENTV 184 (421)
Q Consensus 119 ~~al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~e~l~~~~~~~~~ 184 (421)
++|+..+++.... ...+|+..+.+|++....+...+..... .+..+. ...-.|++++++.+.+++.
T Consensus 106 seA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~a 185 (406)
T PRK12381 106 AEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTC 185 (406)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCee
Confidence 9999999987521 3468999999999986555443322111 011110 0011378899988876665
Q ss_pred EEEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 185 AMVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 185 ~i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++ +.+|.|++|-++ +.+.+++|.++|++||+++|+||+|.++.+.|... .....+.... +.||||.++ +|+|
T Consensus 186 av-iiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~~ 259 (406)
T PRK12381 186 AV-IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGFP 259 (406)
T ss_pred EE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCCc
Confidence 55 458988887544 68999999999999999999999999887777532 2222222222 348999975 7999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC-CCccc
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-PCITC 340 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~g~~~ 340 (421)
+||++++ +++++.+.... ..+.+.+++.+.++.++|+... -.+..++++++.+++.+.|+++ .....
T Consensus 260 ig~~~~~--------~~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~~ 328 (406)
T PRK12381 260 IGAMLTT--------EKCASVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYGL 328 (406)
T ss_pred eEEEEEc--------HHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999986 35777765533 2345778899999888876422 2245677778888888888764 11211
Q ss_pred cC-CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 341 PR-KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 341 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+. ....|.++++.++.... .....+. ..+.++||.+.+.. ++.+|++++ .+++++++++++|.++++++
T Consensus 329 ~~~vrg~Gl~~~~~l~~~~~---~~~~~~~-~~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~~ 400 (406)
T PRK12381 329 FSEIRGLGLLIGCVLNAEYA---GKAKQIS-QEAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACERF 400 (406)
T ss_pred EEEEecCeEEEEEEecCchh---hHHHHHH-HHHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 11 22447788888764210 0123444 45677899997642 468999987 78999999999999999887
Q ss_pred hhc
Q 014631 418 AKQ 420 (421)
Q Consensus 418 ~~~ 420 (421)
.++
T Consensus 401 ~~~ 403 (406)
T PRK12381 401 VSR 403 (406)
T ss_pred Hhc
Confidence 654
No 167
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=7.9e-26 Score=214.24 Aligned_cols=319 Identities=21% Similarity=0.271 Sum_probs=232.1
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC----CCCC----CCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCC
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD----CYSP----SVGILPARRAIADYLNSELPCKLSP-DDVYLTAG 117 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~----~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g 117 (421)
|+|+.+.+. +.|+.+.+++.+.+.+.... .+.. ...+.++|+.++++++ +++ ++|++++|
T Consensus 1 iYld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg------~~~~~~v~~~~~ 69 (371)
T PF00266_consen 1 IYLDNAGTG-----PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLG------APPDEEVVFTSN 69 (371)
T ss_dssp EEEBTSSS------B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHT------SSTTEEEEEESS
T ss_pred CEeeCCCcc-----CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcC------Cccccccccccc
Confidence 456666655 67899999999987753211 1111 1124578888888883 566 89999999
Q ss_pred HHHHHHHHHHHh---cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 118 CKQAIQVILTVL---ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
++++++.++..+ .++||+|++.+..|++.. ...+..|.++..++.+.+ ..+|++++++.+++++++++++.
T Consensus 70 ~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~ 147 (371)
T PF00266_consen 70 GTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISH 147 (371)
T ss_dssp HHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEES
T ss_pred cchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeec
Confidence 999999999999 789999999999998765 444577999999987643 35899999999999999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
.+|.||+..| +++|.++|+++|+++++|.+++. |....++..++.+ ++++|.+|.+|.+| +|++++++
T Consensus 148 ~~~~tG~~~p---i~~I~~~~~~~~~~~~vD~~~~~----g~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~ 215 (371)
T PF00266_consen 148 VENSTGVRNP---IEEIAKLAHEYGALLVVDAAQSA----GCVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP 215 (371)
T ss_dssp BETTTTBBSS---HHHHHHHHHHTTSEEEEE-TTTT----TTSS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH
T ss_pred ccccccEEee---eceehhhhhccCCceeEechhcc----ccccccccccccc---eeeecccccCCCCc--hhhheehh
Confidence 9999999965 88889999999999999999987 4444455554433 78889999544555 79999963
Q ss_pred CCcchhHHHHHHHHhhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 271 PSGILQELRIVDSIKGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
++.++++.... ..++++.....++..+++...+.+++++.++..++.+++
T Consensus 216 --------~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~ 287 (371)
T PF00266_consen 216 --------EAIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYL 287 (371)
T ss_dssp --------HHHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hhhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHH
Confidence 44444421110 123677777778888887655678888999999999999
Q ss_pred HHHhhcCCCccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------CCCeEEEEe
Q 014631 329 YDRIKEIPCITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------MKNWLRITF 396 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~iRi~~ 396 (421)
.+.|++++++.+. .| ..+..+.+.++.. +..++...| +++||.+..|..+. ..+.+|+|+
T Consensus 288 ~~~l~~~~~~~~~-~~~~~~~~~~i~~~~~~~~------~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~ 359 (371)
T PF00266_consen 288 REALEELPGIEVL-GPDDEPRRPSIVSFNLPGS------DADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSL 359 (371)
T ss_dssp HHHHHHTTTEEES-SSSCGGBGTTEEEEEETTS------SHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-
T ss_pred HhhhhcCCceeEe-eecccccccceEEEeecCC------CHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEec
Confidence 9999999887733 32 2233444555432 455555554 66699999987765 358999999
Q ss_pred c--CCHHHHHHH
Q 014631 397 A--IEPSALEEG 406 (421)
Q Consensus 397 ~--~~~e~l~~~ 406 (421)
+ ++.+|++++
T Consensus 360 ~~~nt~~dv~~l 371 (371)
T PF00266_consen 360 HYYNTEEDVDRL 371 (371)
T ss_dssp GTTSSHHHHHHH
T ss_pred cCCCCHHHHhhC
Confidence 8 899999875
No 168
>PLN02651 cysteine desulfurase
Probab=99.96 E-value=2.1e-26 Score=217.39 Aligned_cols=322 Identities=14% Similarity=0.137 Sum_probs=220.2
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
++|+.+.++ +.++.+.+++.+.+.....+. +.. ..-+.++|+.+++++ +.++++|++|+|+
T Consensus 1 iYld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~ 69 (364)
T PLN02651 1 LYLDMQATT-----PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGA 69 (364)
T ss_pred CcccCcCCC-----CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence 356666655 678899999988875421110 000 111456677777776 3567899999999
Q ss_pred HHHHHHHHHHh----cCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 119 KQAIQVILTVL----ARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 119 ~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
+++++.++..+ .++||+|++....|+++...+ ...|.+++.++.++ ++.+|++++++.+++++++++++++
T Consensus 70 t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv~v~~~ 147 (364)
T PLN02651 70 TESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKS--DGLVDLDELAAAIRPDTALVSVMAV 147 (364)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEECC
Confidence 99988887654 468999999998887754433 35688888888753 4568999999999989999999999
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+|+||...| +++|.++|+++|+++++|.+++. |.....+..++.+ +++.|.+|+++.+| +|+++++++
T Consensus 148 ~n~tG~~~~---l~~I~~~~~~~g~~~~vD~a~~~----g~~~~~~~~~~~D---~~~~s~hK~~gp~G--~g~l~v~~~ 215 (364)
T PLN02651 148 NNEIGVIQP---VEEIGELCREKKVLFHTDAAQAV----GKIPVDVDDLGVD---LMSISGHKIYGPKG--VGALYVRRR 215 (364)
T ss_pred CCCceeccc---HHHHHHHHHHcCCEEEEEcchhh----CCcccCcccCCCC---EEEechhhhCCCCc--eEEEEEcCC
Confidence 999999955 88999999999999999999986 3333344444433 77889999744334 899998753
Q ss_pred CcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCC---Cc-
Q 014631 272 SGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKP---EG- 346 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~---~~- 346 (421)
....-.+.+...-.......++++.....++.++++... ...+++.++.+++.+++.+.|++ +|++.+. .| ..
T Consensus 216 ~~~~l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~-~~~~~~~~ 293 (364)
T PLN02651 216 PRVRLEPLMSGGGQERGRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVN-GPRDPEKR 293 (364)
T ss_pred CCCCCCccccCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEE-CCCCcccC
Confidence 110000001000000111245788888888888887533 34577888999999999999985 6788744 43 11
Q ss_pred -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631 347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE 404 (421)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~ 404 (421)
...+.+.++. .++.++...| .+ |.+..|+.+.. .+.+|+|++ +|++||+
T Consensus 294 ~~~i~~~~~~~------~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 294 YPGTLNLSFAY------VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred cCCEEEEEeCC------CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2244444442 1456666665 43 99988876522 268999998 7888874
No 169
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.96 E-value=4.2e-26 Score=216.04 Aligned_cols=337 Identities=14% Similarity=0.141 Sum_probs=218.5
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhc-------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRS-------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
||+..+ |.++..+|.++++..+++++ +.. .|+...++.+|++.+|++++. ++.+++++|.++
T Consensus 2 ~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~-~yg~~~~~~~LE~~lA~~~g~-------e~al~~~sG~~a 70 (392)
T PLN03227 2 NFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRG-FYGTIDAHLELEQCMAEFLGT-------ESAILYSDGAST 70 (392)
T ss_pred CCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCccccc-ccCChHHHHHHHHHHHHHhCC-------CcEEEecCcHHH
Confidence 455554 55677889999999999876 222 466666789999999999842 456777777666
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-----------cCceEEEEe
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-----------ENTVAMVIV 189 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-----------~~~~~i~~~ 189 (421)
+. .++.++.++||.|+++++.|.++...+...+.+++++++.+. -+++.+.+.+. ++++.|++.
T Consensus 71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d~----~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHNDM----KDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCCH----HHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 65 666678899999999999999998888878888777765311 13344433332 356777788
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCC-CCCEEEEcccccccCCCCceEEEE
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWL 266 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~ 266 (421)
+++||+|.+.+ ++++.++|++||+++|+||+|+....+ |..........+ .+..+++.|+||.++..| |++
T Consensus 146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~g---g~v 219 (392)
T PLN03227 146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSVG---GMT 219 (392)
T ss_pred CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhccC---cEE
Confidence 88999999977 778999999999999999999833222 222211111211 223577889999875444 888
Q ss_pred EeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--CCccc-
Q 014631 267 VTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--PCITC- 340 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~- 340 (421)
+++ +++++.+.... . +..+.++..+.++.+++....+ .+++.++++++.+++.+.|++. |.+..
T Consensus 220 ~~~--------~~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~~~~~~~~ 289 (392)
T PLN03227 220 VGS--------EEVVDHQRLSGSGYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSSHPYALKL 289 (392)
T ss_pred ecC--------HHHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcCCcccccc
Confidence 775 34555554322 1 2222345566666555543111 2456777888888888888742 21110
Q ss_pred -----cCCCCceeEEEEecCcccccC-CC---ChHHHHHHHHhhcCeeEEeCC-------CCCCCCeEEEEec--CCHHH
Q 014631 341 -----PRKPEGSMFVMVKLNLSLLEG-IS---DDMEFALQLAKEESVIVLPGM-------AVGMKNWLRITFA--IEPSA 402 (421)
Q Consensus 341 -----~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~ll~~~gv~v~~g~-------~~~~~~~iRi~~~--~~~e~ 402 (421)
......++++.+.+....... .. ...++... +.++|+.+.+.. .+-++..+|++++ +++||
T Consensus 290 rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~ee 368 (392)
T PLN03227 290 RNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHH-SLSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRED 368 (392)
T ss_pred ccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHH-HHHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHHH
Confidence 001223556666664321000 00 01245544 467799986521 1233567999997 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 014631 403 LEEGLGRIKAFCQRH 417 (421)
Q Consensus 403 l~~~~~~l~~~~~~~ 417 (421)
++++++.|++++++.
T Consensus 369 i~~~~~~l~~~~~~~ 383 (392)
T PLN03227 369 IDKLLTVLGEAVEAI 383 (392)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999998775
No 170
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.96 E-value=3.1e-26 Score=220.46 Aligned_cols=344 Identities=15% Similarity=0.132 Sum_probs=228.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|+.++||..|......+ ..+|.+.+++.+++.+.. .|. +..+..+|++++++++. ..+++++++||+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~--~~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~sGs 114 (423)
T TIGR00713 45 VDGNEYIDYVLSWGPLILG-HAHPRVVEAVKEALERGT--SYGAPTEAEILLAKEIISRVP-------SVEMVRFVNSGT 114 (423)
T ss_pred CCCCEEEEccccccccccC-CCCHHHHHHHHHHHHhCC--cCCCCCHHHHHHHHHHHHhCC-------cccEEEEeCCHH
Confidence 3589999999887654332 578999999999998753 343 55567899999999872 136899999999
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhh---cCceeEeeeccCC-------CCcc---CCHHHHHhhhc---c
Q 014631 120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARH---TRLEIRHFDLLPE-------KGWE---VDLDGLEALAD---E 181 (421)
Q Consensus 120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~-------~~~~---~d~e~l~~~~~---~ 181 (421)
+|+..+++... ...++|+..+++|+++...+.. .+......+..+. +... -|++++++.+. +
T Consensus 115 eA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 194 (423)
T TIGR00713 115 EATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGE 194 (423)
T ss_pred HHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCC
Confidence 99999988643 2448999999999997543332 1111111111000 0000 17889988775 4
Q ss_pred CceEEEEe-CCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 182 NTVAMVIV-NPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 182 ~~~~i~~~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
+++++++. .++| +|.+.+ .+.+++|.++|++||+++|+||+|.++.+ |... ....++...+ +.+|||.++ +
T Consensus 195 ~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~-g~~~-~~~~~~~~pD---i~t~sK~l~-~ 267 (423)
T TIGR00713 195 EIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRV-ALGG-AQEYFGVEPD---LTTLGKIIG-G 267 (423)
T ss_pred cEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEcccccccc-Ccch-hHHHhCCCcc---hhhhhhhhc-C
Confidence 55666554 5567 788877 58899999999999999999999998843 3221 1111222222 337999986 8
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+|+||++++ +++++.+... ...+.+.+++.+.++.++|+... ....++.++..+.+++.+.+.+++
T Consensus 268 G~pig~v~~~--------~~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 339 (423)
T TIGR00713 268 GLPVGAFGGR--------REIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLED 339 (423)
T ss_pred CCceeeeeEH--------HHHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999995 4677777532 12345788999999888887533 235667777777777777777777
Q ss_pred CCCccccCCCCceeEEEEecCcccccC-----CCCh---HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISDD---MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG 406 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~ 406 (421)
. ++.....+.+. ++.+.+....... ..+. ..+...+ .++||.+.++ .+ +.+|+++..++++++++
T Consensus 340 ~-~~~~~v~~~g~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~-~~---~~~~l~~~~t~~~i~~~ 412 (423)
T TIGR00713 340 T-GIPHTVNRVGS-MFSLFFTEEEVTNYADAKKSDTELFAKFFHEM-LDKGVFLPPS-QF---EACFLSAAHTEEDIENT 412 (423)
T ss_pred c-CCCeEEEeecc-EEEEEEecCCCCChhhhhcccHHHHHHHHHHH-HHCCeEEecC-Cc---cceeeECCCCHHHHHHH
Confidence 6 44311123333 3334343211000 0011 2355555 4689998754 22 45899988999999999
Q ss_pred HHHHHHHHHH
Q 014631 407 LGRIKAFCQR 416 (421)
Q Consensus 407 ~~~l~~~~~~ 416 (421)
+++|.+++++
T Consensus 413 ~~~l~~~l~~ 422 (423)
T TIGR00713 413 IEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHhh
Confidence 9999999865
No 171
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=9.5e-26 Score=213.62 Aligned_cols=323 Identities=16% Similarity=0.144 Sum_probs=222.3
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
+.++.+.+++.+.+ .+....|. ..+.++++.++++++ ...+.+.|++++|++++++.++..+..+||.|++..
T Consensus 15 ~~~~~~~~a~~~~~-~~~~~~~~--~~~~~~~~~l~~l~~----~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~ 87 (368)
T PRK13479 15 TTSRTVREAMLRDW-GSWDDDFN--ALTASVRAKLVAIAT----GEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPD 87 (368)
T ss_pred CCCHHHHHHhCCCC-CCCChHHH--HHHHHHHHHHHHHhC----CCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEe
Confidence 56677777776654 21111122 235677777777763 122235688999999999999999999999999998
Q ss_pred CCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 141 PGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 141 p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
++|++. ...++..|.+++.++.+. ++.+|++++++.+++ +++.+++++|+||||...| +++|.++|+++|+
T Consensus 88 ~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~~ 162 (368)
T PRK13479 88 NGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHGK 162 (368)
T ss_pred CCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcCC
Confidence 888765 377788999999998753 345899999998754 4567889999999999966 7788899999999
Q ss_pred EEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-------
Q 014631 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------- 288 (421)
Q Consensus 217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------- 288 (421)
++|+|++++. |....++..++. .+++.|++|++ +.+| +||+++++ ++.+.+....
T Consensus 163 ~livDa~~~~----g~~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~~ 225 (368)
T PRK13479 163 RLIVDAMSSF----GAIPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLDL 225 (368)
T ss_pred EEEEEccccc----CCccccccccCc---eEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeecH
Confidence 9999977644 222233333333 26678999975 4567 69999963 3444433221
Q ss_pred -----------ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEec
Q 014631 289 -----------NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKL 354 (421)
Q Consensus 289 -----------~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~ 354 (421)
...++++...+.++.+++.... ..++++..++++++++.+.+.|+++ |+.++..+. .+....+.+
T Consensus 226 ~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~ 304 (368)
T PRK13479 226 YDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFHA 304 (368)
T ss_pred HHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEEC
Confidence 1112566666666666665422 3456788889999999999999988 776332211 111122233
Q ss_pred CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c-CCHHHHHHHHHHHHHHHHHhh
Q 014631 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A-IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~-~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+... ..+..++...+ .++||.+.+|..+ ..+++|++. + +++++++++++.|++++.++.
T Consensus 305 ~~~~---~~~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 305 PADP---AYDFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred CCCC---CcCHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 3210 01345666665 6679999988644 246899986 4 799999999999999988764
No 172
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.96 E-value=3.4e-25 Score=210.43 Aligned_cols=340 Identities=17% Similarity=0.173 Sum_probs=224.6
Q ss_pred HHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC-CCCHHHHHHHHHHHhhhCC
Q 014631 28 RSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPS-VGILPARRAIADYLNSELP 104 (421)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~-~g~~~l~~~ia~~l~~~~~ 104 (421)
.++.+.+...+....++.+.+++.. +.+.+.+++.+..... ....|+.. .-..++++.+++++ |
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~----g 73 (373)
T TIGR03812 7 EELKEYRSEDLKYSDGRILGSMCTN---------PHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL----H 73 (373)
T ss_pred HHHHHHHhcCCCCCCCcEEEEEeCC---------chHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh----C
Confidence 3455555555544334444444432 2344566666665432 12223211 11234555555555 3
Q ss_pred CCCCCCcEEEcCCHHHHHHHHHHHhc------CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 105 CKLSPDDVYLTAGCKQAIQVILTVLA------RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 105 ~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++++++++++|+++++..++.++. ++||+|++++++|.++...++..|++++.++.+. ++.+|++++++.
T Consensus 74 --~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~ 149 (373)
T TIGR03812 74 --LPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDE--DYTVDVKDVEDL 149 (373)
T ss_pred --CCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCC--CCCcCHHHHHHH
Confidence 556788889999999888776653 4679999999999999999999999999998753 456899999999
Q ss_pred hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC----CCC--cccccccCCCCCEEEEccc
Q 014631 179 ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG----STP--YVRMGVFGSTVPVITLGSM 252 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~----~~~--~~~~~~~~~~~~~i~~~s~ 252 (421)
+.+++..++++.|+||||.. .++++|.++|+++|+++|+|++|+.+... |.. ...+..... ..+..|.
T Consensus 150 l~~~~~~vv~~~~~~~tG~~---~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~ 223 (373)
T TIGR03812 150 IDDNTIGIVGIAGTTELGQI---DDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDP 223 (373)
T ss_pred HhhCcEEEEEECCCCCCCcc---CCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECc
Confidence 88777666666789999999 45888889999999999999999865321 001 111111111 1334578
Q ss_pred ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc---------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI---------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
+|+ +.++.++|+++..+ +++.+.+...... .++.+.....++..+++...+.++++..++..+
T Consensus 224 ~K~-~~~~~~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~ 295 (373)
T TIGR03812 224 HKM-GLSPIPAGGILFRS-------KSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECME 295 (373)
T ss_pred ccc-CCCcCCceEEEEeC-------HHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 895 77778888777643 2344544321111 123445566666677765456778888999999
Q ss_pred HHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631 324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS 401 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e 401 (421)
+++++++.|+++ ++..+..|. ..++.+.++ +..++...| .++||.+.++. .++++|++++ ++++
T Consensus 296 ~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--------~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~e 361 (373)
T TIGR03812 296 NTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD--------DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTRE 361 (373)
T ss_pred HHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC--------CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHH
Confidence 999999999988 554232333 445555554 234566555 56799997653 3578999998 7899
Q ss_pred HHHHHHHHHHH
Q 014631 402 ALEEGLGRIKA 412 (421)
Q Consensus 402 ~l~~~~~~l~~ 412 (421)
+++++++.|++
T Consensus 362 did~l~~~L~~ 372 (373)
T TIGR03812 362 HIEEFLEDLKE 372 (373)
T ss_pred HHHHHHHHHhh
Confidence 99999999875
No 173
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.95 E-value=9.4e-26 Score=216.47 Aligned_cols=354 Identities=15% Similarity=0.154 Sum_probs=228.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|......+ ..+|.+.+++.+++++... .+.+..+.+ ....+++++....+.+. .++++++++|++
T Consensus 38 ~dG~~~lD~~~g~~~~~lG-h~~~~i~~a~~~~~~~~~~-~~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGse 113 (425)
T PRK08088 38 VEGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSH-TCFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGSE 113 (425)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHhhCCC-ccccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcHH
Confidence 3588899998886654333 4689999999999987432 222222223 34477777766554222 147788888888
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeE--------------e--eeccCCCCccC--CHHHHHhhhc
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIR--------------H--FDLLPEKGWEV--DLDGLEALAD 180 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~--------------~--~~~~~~~~~~~--d~e~l~~~~~ 180 (421)
|+..+++... .....|+..+++|++....+...+.... . +|.+. ++... +++++++.+.
T Consensus 114 a~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~l~~~l~ 192 (425)
T PRK08088 114 AVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPL-HGVSEDDAIASIERIFK 192 (425)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccc-cCccHHHHHHHHHHHHH
Confidence 8887776543 1234677779999998766555433211 0 11111 11001 1455777664
Q ss_pred ----cCceEEEEeCC--CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 181 ----ENTVAMVIVNP--GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 181 ----~~~~~i~~~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
++..+.++..| ++++...++++.+++|.++|++||+++|+||+|+++.+.|... .+...+ ....+.||||
T Consensus 193 ~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~~-~~~~~~---~~pdi~s~sK 268 (425)
T PRK08088 193 NDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLF-AMEQMG---VAADLTTFAK 268 (425)
T ss_pred hccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-HHhhcC---CCCCEEEEec
Confidence 23344566677 5666677899999999999999999999999999876655422 221222 1234679999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l 332 (421)
.++ +|+|+||++++ .++++.+..... .+.+.+++.|.++.++|+... +..+++.++..+.+++.+.+.+
T Consensus 269 ~l~-~G~rig~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l~ 339 (425)
T PRK08088 269 SIA-GGFPLAGVTGR--------AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAIA 339 (425)
T ss_pred ccc-CCCcceeeEec--------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 975 89999999996 357777655432 355788899999999997643 3445555555555555555544
Q ss_pred hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 333 KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
.+.|.+..+ .+. |+++|+.+..... +.......+... +.++||.+.|+..+ .+.+|++++ .+++++++++
T Consensus 340 ~~~~~~~~v-~g~-G~~~~l~l~~~~~~~~p~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~i 414 (425)
T PRK08088 340 EKHPEIGDV-RGL-GAMIAIELFEDGDHSKPNAKLTAQIVAR-ARDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQGL 414 (425)
T ss_pred HhCCCeEEE-ecc-ceEEEEEEecCCCCCCCCHHHHHHHHHH-HHhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHHH
Confidence 555554323 223 8889999843210 000113455554 46679998876544 478999998 6799999999
Q ss_pred HHHHHHHHHh
Q 014631 408 GRIKAFCQRH 417 (421)
Q Consensus 408 ~~l~~~~~~~ 417 (421)
++|.+++.+.
T Consensus 415 ~~l~~~l~~~ 424 (425)
T PRK08088 415 EIIAQCFDEA 424 (425)
T ss_pred HHHHHHHHhh
Confidence 9999998754
No 174
>PLN00144 acetylornithine transaminase
Probab=99.95 E-value=1.6e-25 Score=211.41 Aligned_cols=342 Identities=14% Similarity=0.128 Sum_probs=222.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++++... +.. ....+....+++.+.+.. ..+.++++++|++
T Consensus 12 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse 83 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNAL-GHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE 83 (382)
T ss_pred CCCCEEEECCcCHHhccC-CCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence 358899999877533222 25689999999999986321 111 112344455555554422 2468999999999
Q ss_pred HHHHHHHHhc---C------C------CCeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCc--cCCHHHHHhhh
Q 014631 121 AIQVILTVLA---R------P------GANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGW--EVDLDGLEALA 179 (421)
Q Consensus 121 al~~~~~~l~---~------~------gd~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~--~~d~e~l~~~~ 179 (421)
|+..+++... . + ..+|+....+|++....+........ +.+..+...+ --|++.+++.+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 163 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence 9999988642 1 0 25799999999998655554332210 0111110000 01688998877
Q ss_pred ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEccccccc
Q 014631 180 DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 180 ~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~ 256 (421)
..+..+.+++.| +||.|+. ++.+.+++|.++|++||+++|+||+|+++.+.|..+.. +..+.++ +.||||.+
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l 238 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL 238 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence 544444555666 7885543 34555999999999999999999999998877753221 3334433 55899995
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhhc
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~ 334 (421)
.+|+|+|+++++ +++++.+.... ..+.+.+++.+.++.+.|+...+..+ +...+.-+..++.+.+.+.+
T Consensus 239 -~~G~pig~v~~~--------~~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~ 309 (382)
T PLN00144 239 -AGGLPIGAVLVT--------EKVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG 309 (382)
T ss_pred -cCCcceEEEEEc--------HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence 678999999996 35666665432 23557888999988876654332222 22222223334445555555
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
.|.+..+ .. .|+++|++++. ....++.. +.++||.+.|+.. .+.+|++++ .+++++++++++|.+
T Consensus 310 ~~~~~~v-rg-~G~~~~l~l~~-------~~~~~~~~-~~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 310 NPHVKEV-RG-VGLLVGIQLDV-------PAGPLVDA-CRDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred CCCceee-ec-CceEEEEEecC-------ccHHHHHH-HHHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 5544323 23 78999999842 23456554 5678999998732 488999998 679999999999999
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98764
No 175
>PRK07049 methionine gamma-lyase; Validated
Probab=99.95 E-value=1.9e-25 Score=212.91 Aligned_cols=229 Identities=13% Similarity=0.127 Sum_probs=173.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCc
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRL 155 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~ 155 (421)
.+|+. .....|++.+|++.+ .+++++++||++|+..++.+++++||+|++++|.|.++...+ ...|+
T Consensus 78 ~R~~~-Pt~~~Le~~lA~leg--------~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi 148 (427)
T PRK07049 78 SRFNH-PNSEIVEDRLAVYEG--------AESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGV 148 (427)
T ss_pred cCCCC-cCHHHHHHHHHHHhC--------CCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCc
Confidence 45543 346899999999973 457888899999999999999999999999999999986653 45688
Q ss_pred eeEeeeccCCCCccCCHHHHHhhhc-----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHh---cCcEEEEccccccc
Q 014631 156 EIRHFDLLPEKGWEVDLDGLEALAD-----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK---LGIMVISDEVYDHL 227 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~d~e~l~~~~~-----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~~ 227 (421)
+++.++. ..|++++++.+. +++++|++++|+||||.+++.+++.+|++.|+. +++++|+|++|...
T Consensus 149 ~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~ 222 (427)
T PRK07049 149 GAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGP 222 (427)
T ss_pred EEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCcccc
Confidence 7666641 146677766553 468999999999999999999999999988654 68999999998653
Q ss_pred ccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHH
Q 014631 228 TFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQI 305 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 305 (421)
.. ..++ .. +..+++.|+||.++ .+|+|+||++++ +++.+.+...... ..+.+++.+.++...
T Consensus 223 ~~----~~pl-~~---g~divv~S~SK~~gG~~glr~G~vv~~--------~~l~~~l~~~~~~~g~~ls~~~a~l~~r~ 286 (427)
T PRK07049 223 VF----QKPL-EH---GADLSVYSLTKYVGGHSDLVAGAVLGR--------KALIRQVRALRSAIGTQLDPHSCWMLGRS 286 (427)
T ss_pred cc----CCcc-cc---CCCEEEEcCceeecCCCCcEEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHcC
Confidence 32 1122 11 23488889999999 599999999975 3566666655432 345777888877666
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 306 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
|+. +..+.++..++++.+.+.|+++|++..+..|
T Consensus 287 L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 287 LET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred CCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 642 5555667789999999999998887644444
No 176
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.95 E-value=3.6e-25 Score=211.83 Aligned_cols=332 Identities=14% Similarity=0.130 Sum_probs=223.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
.|.+++||..|..... ....+|.+.+++.+++++.... .+.......++++.++++. | .+.++++++|++
T Consensus 39 ~g~~~lD~~~~~~~~~-~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~ 109 (401)
T PRK00854 39 DGNRYLDCLSAYSAVN-QGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT----G----SHKVLPMNSGAE 109 (401)
T ss_pred CCCEEEEcCcchhhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC----C----CCEEEEeCCcHH
Confidence 4788999877753322 1245899999999999874221 1112223456777777764 2 358999999999
Q ss_pred HHHHHHHHhcC---------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHh
Q 014631 121 AIQVILTVLAR---------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 121 al~~~~~~l~~---------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~ 177 (421)
|+..+++.+.. +| ++|++...+|++....+...+.. +..++. .|++++++
T Consensus 110 A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 182 (401)
T PRK00854 110 AVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVPF-------GDAEALEA 182 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeCC-------CCHHHHHH
Confidence 99999988742 24 68888888888865444332221 122211 37899999
Q ss_pred hhccCceEEEEeCCCCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
.+.+++++|++.+|+||+|.++++ +.+++|.++|++||+++|+||+|+++.+.|... .....+....++ + ++|++
T Consensus 183 ~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~-~~~~~g~~~D~~-~--~~K~l 258 (401)
T PRK00854 183 AITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLL-AEEHEGIEADVT-L--IGKAL 258 (401)
T ss_pred HhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHh-HHhhcCCCCCEE-E--ecccc
Confidence 998889999999999999999874 569999999999999999999999776655322 111112111223 2 47998
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+...+|+|+++++ +++++.+.... ..+.+.+++.+.++.++|+...+ .+..+.++++.+++.+.|+++
T Consensus 259 ~gg~~~ig~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~ 327 (401)
T PRK00854 259 SGGFYPVSAVLSN--------SEVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSI 327 (401)
T ss_pred cCCccCeEEEEEc--------HHHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhh
Confidence 6544799999986 35666665332 22346788889998888864221 235677788888888888876
Q ss_pred CCcccc--CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631 336 PCITCP--RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 336 ~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
+...+ ..+. |.++.+.+.... .+..+++..| .++||.+.+.. .+++|++++ +++++|++++++|+
T Consensus 328 -~~~~~~~~~g~-g~~~~i~~~~~~----~~~~~~~~~L-~~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l~ 396 (401)
T PRK00854 328 -RSNIVREVRGR-GLMLAVELEPEA----GGARQYCEAL-KERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQIA 396 (401)
T ss_pred -ccCceEEEecc-ceEEEEEEecCc----hhHHHHHHHH-HHCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHHH
Confidence 22211 1233 444444442210 1345677666 45799997532 479999986 79999999999999
Q ss_pred HHHH
Q 014631 412 AFCQ 415 (421)
Q Consensus 412 ~~~~ 415 (421)
+++.
T Consensus 397 ~~l~ 400 (401)
T PRK00854 397 KVLA 400 (401)
T ss_pred HHhh
Confidence 8863
No 177
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.95 E-value=7.4e-25 Score=207.61 Aligned_cols=333 Identities=13% Similarity=0.138 Sum_probs=228.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.|+.++||..|.-.. +++.+|.+++++.+++.... .+. .....++++.+++.+.. .++ .+++++++++
T Consensus 27 dg~~~lD~~s~~~~~--~lG~~p~v~~a~~~~~~~~~--~~~-~~~~~~~~~~la~~l~~------~~~~~~~~~~SGse 95 (375)
T PRK04260 27 DGKKYLDFSSGIGVT--NLGFHPQVQQALQKQAGLIW--HSP-NLYLNSLQEEVAQKLIG------DKDYLAFFCNSGAE 95 (375)
T ss_pred CCCEEEECCCCcccc--cCCCCHHHHHHHHHHHHhcC--ccc-CccCCHHHHHHHHHHhc------CcCCEEEEcCccHH
Confidence 488899998774332 23347889999999987632 222 23356888999987742 233 4689999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHH-HHhhcCceeEe------eeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEA-NARHTRLEIRH------FDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~-~~~~~g~~~~~------~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
|+..+++... ..+++|++.+.+|++... .....|.+... ++...... -.|++.+++.+.+++.++++..+
T Consensus 96 A~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~dl~~l~~~l~~~~a~vi~e~v 174 (375)
T PRK04260 96 ANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI-FNDLNSVKALVNKNTAAVMLELV 174 (375)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC-CCCHHHHHHhcCCCeEEEEECCe
Confidence 9998887763 345789999999987532 22222221100 00000000 13788999888767777777888
Q ss_pred CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 192 GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 192 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
+|++|... +.+.++++.++|+++|+++|+||+|.++.+.|... .....+...+ +.||||.++ +|+|+||++++
T Consensus 175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l~-~G~~ig~~~~~- 248 (375)
T PRK04260 175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGLA-NGVPVGAMLAK- 248 (375)
T ss_pred ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEeccccc-CCcceEEEEEc-
Confidence 99999874 46789999999999999999999999876655432 2112222222 338999964 78999999996
Q ss_pred CCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 271 PSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
+++.+.+.... ..+.+.+++.+.++.++|+... +...++.++..+..++.+.+.+.+.+.+..+ +..|+
T Consensus 249 -------~~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~--~~~g~ 319 (375)
T PRK04260 249 -------SSLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTV--RGLGY 319 (375)
T ss_pred -------HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--eccce
Confidence 35666665432 2345678889999988887633 4556666777777777777777766433312 34688
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
++|++++. +...+...+ .++||.+.|+. .+.+|++++ .+++++++++++|+++
T Consensus 320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 99998842 345666554 67899998752 378999996 7899999999999875
No 178
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.95 E-value=1.3e-24 Score=208.23 Aligned_cols=345 Identities=14% Similarity=0.145 Sum_probs=219.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.+++||..|...... ...+|.+.+++.++++.... ..... ..+..+.+.+.+.+..+ .+.++++++|++|
T Consensus 29 dg~~~lD~~~~~~~~~~-Gh~~p~v~~a~~~~~~~~~~-~~~~~--~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~A 100 (400)
T PTZ00125 29 EGKKYYDFLSAYSAVNQ-GHCHPKILAALINQAQKLTL-TSRAF--YNDVLGLAEKYITDLFG----YDKVLPMNSGAEA 100 (400)
T ss_pred CCCEEEEcccCHhhccC-CcCCHHHHHHHHHHHHhccc-ccccc--cCHHHHHHHHHHHhCCC----CCEEEEeCCcHHH
Confidence 47889999877543221 24688999999999876321 11111 12333444444443222 3588999999999
Q ss_pred HHHHHHHhcC----------CCCeEEEcCCCCcchHHHHhhcCceeEe----eeccCC--CCccCCHHHHHhhhc-cCce
Q 014631 122 IQVILTVLAR----------PGANILLPKPGFPLYEANARHTRLEIRH----FDLLPE--KGWEVDLDGLEALAD-ENTV 184 (421)
Q Consensus 122 l~~~~~~l~~----------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~--~~~~~d~e~l~~~~~-~~~~ 184 (421)
+..+++.+.+ .+++|++.+.+|++........+..... .+..+. .-.-.|++++++.+. ++++
T Consensus 101 ~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~ 180 (400)
T PTZ00125 101 GETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVA 180 (400)
T ss_pred HHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeE
Confidence 9999987631 3478999999998865443322211100 010000 000127899999885 5677
Q ss_pred EEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 185 AMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
++++..++||||.+++ .+.+++|.++|++||+++|+||+|+++.+.|..+ .....+....++ ++||.++.+++|+
T Consensus 181 ~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~-~~~~~~~~pd~~---~~sK~l~~g~~~i 256 (400)
T PTZ00125 181 AFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL-AHDHEGVKPDIV---LLGKALSGGLYPI 256 (400)
T ss_pred EEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-HHHhcCCCCCEE---EEcccccCCCcCc
Confidence 7777777999999886 4569999999999999999999998876666432 111122111222 5789986555699
Q ss_pred EEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCCc
Q 014631 264 GWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPCI 338 (421)
Q Consensus 264 G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g~ 338 (421)
||++++ +++.+.+.... ..+.+.+++.+.++.++++...+.. ..++.+++.+.+.+.|++ .+.+
T Consensus 257 g~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~ 325 (400)
T PTZ00125 257 SAVLAN--------DDVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEK---LAENAQRLGEVFRDGLKELLKKSPWV 325 (400)
T ss_pred EEEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 999986 35667665432 2344677888888877776422222 233444445555555544 2333
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
..+ .+ .|.+.++.++... .....++...+ .++||.+.|+. .+++|++++ .+++++++++++|.+++++
T Consensus 326 ~~~-~~-~g~~~~v~~~~~~---~~~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~ 395 (400)
T PTZ00125 326 KEI-RG-KGLLNAIVFDHSD---GVNAWDLCLKL-KENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLKS 395 (400)
T ss_pred EEE-ec-ccEEEEEEEccCc---chHHHHHHHHH-HHCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 212 33 4677777776311 11345666666 46799998863 478999976 8999999999999999988
Q ss_pred hhh
Q 014631 417 HAK 419 (421)
Q Consensus 417 ~~~ 419 (421)
+..
T Consensus 396 ~~~ 398 (400)
T PTZ00125 396 FDS 398 (400)
T ss_pred Hhc
Confidence 743
No 179
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=4.9e-25 Score=198.59 Aligned_cols=342 Identities=17% Similarity=0.240 Sum_probs=234.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.+|++|+||..|-..... ...+|.+.+++.+++++- ..+.|. .+.+..+++.+.+.. + ..+.++++++|
T Consensus 39 ~~G~~YlDf~~Giav~~l-GH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s--~-~~d~vff~NSG 109 (404)
T COG4992 39 QQGREYLDFAAGIAVNNL-GHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELS--P-FADRVFFCNSG 109 (404)
T ss_pred CCCCEeeeeccceeeecc-CCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhC--c-cccEEEEcCCc
Confidence 459999999888655333 368999999999998862 222332 233444444443311 2 37899999999
Q ss_pred HHHHHHHHHHhcC----CC-CeEEEcCCCCcchHHHHhhcCceeEee----eccCCC---CccCCHHHHHhhhccCceEE
Q 014631 119 KQAIQVILTVLAR----PG-ANILLPKPGFPLYEANARHTRLEIRHF----DLLPEK---GWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 119 ~~al~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~----~~~~~~---~~~~d~e~l~~~~~~~~~~i 186 (421)
+||++.+++...+ ++ .+|+....+|++-...+...+.+..+. |+.+.- .|+ |++++++++++++.+|
T Consensus 110 aEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-Di~al~~ai~~~taAv 188 (404)
T COG4992 110 AEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-DIEALEAAIDEDTAAV 188 (404)
T ss_pred HHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-CHHHHHHHhccCeEEE
Confidence 9999999987532 22 488899999988655555444443221 221110 122 8999999999988888
Q ss_pred EEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 187 VIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 187 ~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
++-..+...|++. +++.++++.++|++||+++|.||+|+++.++|.-+ ....++...+++ ++.|.+ ..|+++|.
T Consensus 189 ivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PDI~---tlaK~L-gGG~PigA 263 (404)
T COG4992 189 IVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPDIL---TLAKAL-GGGFPIGA 263 (404)
T ss_pred EEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCCEE---Eeeccc-cCCcccee
Confidence 7666688899875 55779999999999999999999999999888743 333333333344 678996 56799999
Q ss_pred EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCccc
Q 014631 266 LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCITC 340 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~ 340 (421)
+++++ .+.+.+..... .+++.|+++++++.++++...++ +..++.+++.+++.+.|.++ |-+..
T Consensus 264 ~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e---~ll~~v~~~g~~~~~~L~~l~~~~~~v~~ 332 (404)
T COG4992 264 MLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEE---GLLENVREKGEYLLQRLRELKRRYPLVKE 332 (404)
T ss_pred eEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcch---hHHHHHHHHHHHHHHHHHHHhhcCCceee
Confidence 99852 23444544433 46789999999999998764432 33334445555555555543 32221
Q ss_pred cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
-..-|+++.+++.... ...+++.. ++++||.+.+.. ++.+|+.++ .++|++++++++|++++....
T Consensus 333 --vRG~GLmiGiel~~~~-----~a~~~~~~-~~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~~ 400 (404)
T COG4992 333 --VRGRGLMIGIELKEPY-----RARDIVRA-LREEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAAS 400 (404)
T ss_pred --eecceeEEEEEecCcc-----cHHHHHHH-HHHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHhh
Confidence 2234677777776431 24666665 577899998754 469999998 799999999999999998765
Q ss_pred hc
Q 014631 419 KQ 420 (421)
Q Consensus 419 ~~ 420 (421)
..
T Consensus 401 ~~ 402 (404)
T COG4992 401 AR 402 (404)
T ss_pred hc
Confidence 43
No 180
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.95 E-value=1.6e-24 Score=208.51 Aligned_cols=339 Identities=15% Similarity=0.095 Sum_probs=215.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
....++|..+. .+.++.+++++...+.......++ .......+++...+.+.+.+| .+...|++++
T Consensus 24 ~~~~~~l~~~~------n~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s 95 (416)
T PRK00011 24 QEEHIELIASE------NFVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS 95 (416)
T ss_pred HhcCeeeeccc------CcCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence 36678888765 246889999987765321110111 111123444423334444444 4455566655
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-----HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEAN-----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~ 190 (421)
|++++..++.+++++||+|+++.|+|.++... ....|++++.+++++ +++.+|++++++.+++ +++++++++
T Consensus 96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~ 173 (416)
T PRK00011 96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA 173 (416)
T ss_pred -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence 57799999999999999999999999764321 123456777777653 2467999999998864 688887766
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
+++ |.. .++++|.++|+++|+++|+|++|.... +.|.....+. . ..++++|+||++ +|.|.||++++
T Consensus 174 ~~~--~~~---~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~i~~~ 241 (416)
T PRK00011 174 SAY--SRP---IDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGLILTN 241 (416)
T ss_pred CcC--CCc---cCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceEEEeC
Confidence 554 444 458999999999999999999986422 2222122222 1 237789999985 67889999985
Q ss_pred CCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 270 DPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+ +++.+.+...... .+++......++..++......++++..++++++++++.+.|++. |+.+...+..+
T Consensus 242 ~-------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 313 (416)
T PRK00011 242 D-------EELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDN 313 (416)
T ss_pred C-------HHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCC
Confidence 3 3466666554332 222333333333333322223457888899999999999999987 77632112234
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC-C-----CCCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-V-----GMKNWLRITFA------IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-----~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~ 415 (421)
+++|+.++... .+..++. ..++++||.+..+.. + ..+..+|++.. .+++|++++++.|++++.
T Consensus 314 ~~~~i~~~~~~----~~~~~~~-~~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 314 HLVLVDLRSKG----LTGKEAE-AALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred eEEEEeCcccC----CCHHHHH-HHHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 78888885321 1234444 455788999974321 1 12457999652 468999999999998865
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
.
T Consensus 389 ~ 389 (416)
T PRK00011 389 N 389 (416)
T ss_pred c
Confidence 4
No 181
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=5.6e-25 Score=213.35 Aligned_cols=326 Identities=18% Similarity=0.198 Sum_probs=216.8
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHH---HHHhhhCCCCCCCCcEEEcCCHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIA---DYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia---~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..++++.|.+. +..|..+.+++... +. ...|.+. ...+.++++++ +++.+.+| ++++++.+|+|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~-~~--~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRS-EF--YTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhch-hH--HHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence 56788888755 34556665554332 11 1234331 11234555555 34466665 4566899999999
Q ss_pred HHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 120 QAIQVILTVLA-RPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 120 ~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
+++..++.++. ++||+|+++++.|+++...+.. .|.+++.++.++ + .+|++++++.+.++++++++++| |+
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999888874 7899999999999888776654 689999998754 3 68999999999889999999999 89
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEE--cccccccccCCCCcccccccCCCCCEEEEc---ccccccCCCCceEEEEEee
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVIS--DEVYDHLTFGSTPYVRMGVFGSTVPVITLG---SMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~ 269 (421)
||.+ .++++|.++|+++|+++++ |.+..+ ... ....++. .+++. ++||.+.++|+++||++++
T Consensus 216 tG~v---~~l~~I~~~a~~~~~~~iv~~d~~~~g-----~~~-~~~~~~~---D~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVI---EDLEEIAEIAHAGGALFIVGVDPVSLG-----LLK-PPGEYGA---DIVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCee---CCHHHHHHHHHHCCCEEEEEcChHHhc-----cCC-CcccCCC---CEEEECCCcCCCCCCCCCCCchHHHhh
Confidence 9999 5699999999999999988 533221 100 1112222 24444 5667777788899999885
Q ss_pred CCCcchhHHHHHHHHh----------------------------hhccc-ccCCchHHH-HHHHHHhhccchhHHHHHHH
Q 014631 270 DPSGILQELRIVDSIK----------------------------GYLNI-SSGPATFVQ-GAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~----------------------------~~~~~-~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~ 319 (421)
+ ++.+.+. ..... ..+.+...+ .++..++....+.++++..+
T Consensus 284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 2 3444421 11111 111122222 33333344334577899999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCceeEEE--EecCcccccCCCChHHHHHHHHhhcCeeE-EeCCCCC--CCCeEEE
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVM--VKLNLSLLEGISDDMEFALQLAKEESVIV-LPGMAVG--MKNWLRI 394 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gv~v-~~g~~~~--~~~~iRi 394 (421)
++.++++++.+.|++++++. +. .+.+|.+ +.++. +..+++.+|++ +||.. .++..+. ..+++|+
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~-~~--~~~~~~~~~v~~~~-------~~~~~~~~L~~-~gi~~~~~~~~~~~~~~~~~rv 424 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVE-LF--DGPFFNEFVVRLPK-------PAEEVNEALLE-KGILGGYDLGRYYPELGNHLLV 424 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEE-ec--CCCeEEEEEEecCC-------CHHHHHHHHHh-cCCCCCcccccccCCcCCEEEE
Confidence 99999999999999988887 32 3344544 33321 35678877754 56653 3444443 2468999
Q ss_pred Eec--CCHHHHHHHHHHHHHHH
Q 014631 395 TFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l~~~~ 414 (421)
+++ +++++++++++.|++++
T Consensus 425 s~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 425 CVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ecCCCCCHHHHHHHHHHHHHHh
Confidence 997 89999999999998764
No 182
>PRK07505 hypothetical protein; Provisional
Probab=99.95 E-value=1.5e-24 Score=207.27 Aligned_cols=330 Identities=16% Similarity=0.186 Sum_probs=204.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|..++||...+ +.++..+|.+.+++.+++++.. .....+ .....++++.+++++ | . +.++++
T Consensus 44 ~g~~~ld~~s~~---~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~~~~ 112 (402)
T PRK07505 44 DGHTFVNFVSCS---YLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF----G--A--SVLTFT 112 (402)
T ss_pred CCceEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh----C--C--CEEEEC
Confidence 478899997753 3334678999999999997521 111111 112356666666665 2 2 344455
Q ss_pred CCHHHHHHHHHHHhc----CCCC-eEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631 116 AGCKQAIQVILTVLA----RPGA-NILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 116 ~g~~~al~~~~~~l~----~~gd-~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~ 187 (421)
++++|+..+++.+. .+|+ .|++.+..|++... .....+.+++.+|. .|++++++.+.+++++++
T Consensus 113 -sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~v 184 (402)
T PRK07505 113 -SCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVAY 184 (402)
T ss_pred -ChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEEE
Confidence 55667776665532 2233 36666656654321 12223456666654 278899998877788899
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccC--CCCCEEEEcccccccCCCCceE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFG--STVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
+++|+||||.+++ +++|.++|+++|+++|+||+|+...++ |... ....++ ..+++++++|+||.|+++|
T Consensus 185 l~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~-~~~~~~~~~~d~~i~~~s~sK~~~~~G--- 257 (402)
T PRK07505 185 VADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGY-VRSELDYRLNERTIIAASLGKAFGASG--- 257 (402)
T ss_pred EEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCch-HHHHcCCCCCCCeEEEEechhhhhccC---
Confidence 9999999999977 688889999999999999999654333 3322 112222 3456888999999998776
Q ss_pred EEEEeeCCCcchhHHHHHHHHhhhccc---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631 264 GWLVTSDPSGILQELRIVDSIKGYLNI---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC 340 (421)
Q Consensus 264 G~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 340 (421)
||+++++ +++.+.+...... ..+++++++.++.++++...++++.+..++++++.+.+...+...
T Consensus 258 g~~~~~~-------~~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 325 (402)
T PRK07505 258 GVIMLGD-------AEQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----- 325 (402)
T ss_pred eEEEeCC-------HHHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence 8876543 3466666554322 124555677777777653223444455555555555443332111
Q ss_pred cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
. .....++.++.++.. ....++...| .++||.+.++..+.. .+++|++++ .++++++++++.|.++++
T Consensus 326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQL-LDRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred C-CCCCCCEEEEEeCCH-----HHHHHHHHHH-HHCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 1 111122223333211 0244566665 567999998754432 268999998 799999999999999876
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
+
T Consensus 399 ~ 399 (402)
T PRK07505 399 E 399 (402)
T ss_pred h
Confidence 5
No 183
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.95 E-value=1.2e-24 Score=207.13 Aligned_cols=335 Identities=17% Similarity=0.183 Sum_probs=220.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|.+++||..|....+.+. .+|.+.+++.+++++.. ...| +.....+|.+.++++. + .+.++++++|+
T Consensus 33 dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~la~~L~~~~----~----~~~~~f~~SGs 102 (397)
T TIGR03246 33 QGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGY-TNEPVLRLAKKLVDAT----F----ADKVFFCNSGA 102 (397)
T ss_pred CCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCcc-CCHHHHHHHHHHHhhC----C----CCEEEEeCCcH
Confidence 5889999988754444444 68999999999988621 1112 1222345555555543 2 36899999999
Q ss_pred HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhh
Q 014631 120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+|+..+++... ++| ++|+..+.+|++....+...+.. +..++. .|++++++.
T Consensus 103 eA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 175 (397)
T TIGR03246 103 EANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKAL 175 (397)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHH
Confidence 99999998762 123 57888888898875444332211 111111 278999998
Q ss_pred hccCceEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631 179 ADENTVAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI 257 (421)
Q Consensus 179 ~~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 257 (421)
+.+++++|++..++++.|... +.+.+++|.++|++||+++|+||+|.++.+.|... ....++.... +.++||.++
T Consensus 176 l~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD---i~t~~K~lg 251 (397)
T TIGR03246 176 ISDKTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---ILTSAKALG 251 (397)
T ss_pred hccCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC---EEEeehhhh
Confidence 877776666554456666554 78999999999999999999999998887766543 2222222222 237899975
Q ss_pred CCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
+|+++|+++++ +++++.+.... ..+.+.+++.+.++.++|+... -++..++++++.+++.+.|+++.
T Consensus 252 -gG~pigav~~~--------~~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~ 319 (397)
T TIGR03246 252 -GGFPIGAMLTT--------TEIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKIN 319 (397)
T ss_pred -CCcceeEEEEc--------HHHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence 78999999996 35667665432 2344678888888888886422 13456777778888888777641
Q ss_pred -CccccC-CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 337 -CITCPR-KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 337 -g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
...++. ....|.++.+.+.... ......++..+ .++|+.+.+.. .+.+|++++ .+++++++++++|.+
T Consensus 320 ~~~~~~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~ 391 (397)
T TIGR03246 320 ARYNVFSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFER 391 (397)
T ss_pred hcCCCeEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 111110 1222445555553210 01245566554 66799987632 368999766 899999999999999
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
++++.
T Consensus 392 ~l~~~ 396 (397)
T TIGR03246 392 AIEQV 396 (397)
T ss_pred HHHHh
Confidence 98753
No 184
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.95 E-value=2.3e-24 Score=202.91 Aligned_cols=326 Identities=11% Similarity=0.099 Sum_probs=222.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
++++++|+..+ |.++..+|.++++..+++++..... ++...-+.+|++.+|+|++ .+..++++
T Consensus 101 ~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g--------~e~all~s 169 (476)
T PLN02955 101 FKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKK--------KEDCLVCP 169 (476)
T ss_pred CceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHC--------CCcEEEEC
Confidence 45889999888 6778899999999999988632211 1112224789999999983 45677777
Q ss_pred CHHHHHHHHHHHh--------------cCCCCeEEEcCCCCcchHHHHhhc----CceeEeeeccCCCCccCCHHHHHhh
Q 014631 117 GCKQAIQVILTVL--------------ARPGANILLPKPGFPLYEANARHT----RLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 117 g~~~al~~~~~~l--------------~~~gd~Vl~~~p~y~~~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+|..|+..++.+| ..++|.|++....|.+....++.. ++++..++++ |+++|++.
T Consensus 170 SGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~HN-------D~~~Le~~ 242 (476)
T PLN02955 170 TGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYRHC-------DMYHLNSL 242 (476)
T ss_pred ChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHHhccccCCceEEEeCCC-------CHHHHHHH
Confidence 7777877777776 245678889999999998888876 4667766653 78888877
Q ss_pred hcc--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631 179 ADE--NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK 254 (421)
Q Consensus 179 ~~~--~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK 254 (421)
++. ..+.++++.+ -++.|.+.| +++|.++|++||+++|+||+|+.+.++..+......++. .+..++++||||
T Consensus 243 L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsK 319 (476)
T PLN02955 243 LSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSK 319 (476)
T ss_pred HHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCcc
Confidence 642 2223445554 789999966 888888889999999999999987765433222222221 345688999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
+||..| |+++++ .++++.+..... .++++.+ ....++.++++.... -...+++++++.+++.+.
T Consensus 320 A~G~~G---Gfi~gs--------~~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~ 386 (476)
T PLN02955 320 AAGCHG---GFIACS--------KKWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL 386 (476)
T ss_pred chhccC---ceeecH--------HHHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh
Confidence 987777 999885 356666665432 2233333 334444444543211 124667888888888874
Q ss_pred hhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHH
Q 014631 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEG 406 (421)
Q Consensus 332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~ 406 (421)
+ |+. . .+..+.+.+.... ....+..+| .++||.+.+..++..+ ..+||+++ ++++||+++
T Consensus 387 ~----G~~-~----~sPI~pI~ig~~~-----~a~~~~~~L-~~~Gi~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~l 451 (476)
T PLN02955 387 S----GVD-I----SSPIISLVVGNQE-----KALKASRYL-LKSGFHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKL 451 (476)
T ss_pred c----CCC-C----CCCEEEEEeCCHH-----HHHHHHHHH-HHCCCEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHH
Confidence 2 555 2 1444545554321 234455554 6779999987776553 46999997 899999999
Q ss_pred HHHHHHHHHHh
Q 014631 407 LGRIKAFCQRH 417 (421)
Q Consensus 407 ~~~l~~~~~~~ 417 (421)
++.|.++.+..
T Consensus 452 v~~L~~~~~~~ 462 (476)
T PLN02955 452 ITALSSCLDFD 462 (476)
T ss_pred HHHHHHHHhhh
Confidence 99999887654
No 185
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=4e-25 Score=200.16 Aligned_cols=347 Identities=16% Similarity=0.141 Sum_probs=223.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.+.+.++++.+..+ |.+++|.+++.+.+... ....|+. ..+.++.|+.+|+++ ++++.+|+||
T Consensus 40 ~~~~~vyld~~at~-----p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiFt 108 (428)
T KOG1549|consen 40 HGTRPVYLDNQATG-----PMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVFT 108 (428)
T ss_pred CCCccEEEecCcCC-----CCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEEe
Confidence 37788999999755 78899999999987752 1112432 334788999999999 5788889999
Q ss_pred CCHHHHHHHHHHHhc-CCCC----eEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631 116 AGCKQAIQVILTVLA-RPGA----NILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 116 ~g~~~al~~~~~~l~-~~gd----~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~ 187 (421)
+|+|++++++++.+. ..+| +|++.+..|......+ +..|+++.++|+. +.+.+|.+.+++.++++|+++.
T Consensus 109 s~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv~ 186 (428)
T KOG1549|consen 109 SGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLVS 186 (428)
T ss_pred CCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEEE
Confidence 999999999999874 3455 8999999998765444 4568999999986 3445899999999999999999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+...+|.+|+.+| +++|+++|+++|+.+++|.+|+- |.-..++..++.+ ++..|.||+||.+| +|+++
T Consensus 187 I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaLY 254 (428)
T KOG1549|consen 187 IMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGALY 254 (428)
T ss_pred EEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEEE
Confidence 9999999999965 88999999999999999999998 7777788888776 66779999999999 99999
Q ss_pred eeC-CCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh-cCCCccccCCCC
Q 014631 268 TSD-PSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK-EIPCITCPRKPE 345 (421)
Q Consensus 268 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~~~~~~ 345 (421)
++. ...+...+.+....+......++...+.+..+-++.+... ..+.-....+.+..+.+...+. ..+.+. ...+.
T Consensus 255 vr~~~~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~-~~~~~~~~~~~~~~~~ll~~i~~~~~~~~-~~G~~ 332 (428)
T KOG1549|consen 255 VRRKRPRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVN-KEMAYDEAIIKRLSEKLLMGIGQSLPEVT-LNGSG 332 (428)
T ss_pred EccCCCcccccCcccCCccccccccCCcCchhhhhhHHHHHHHH-hhcchhHHHHHHHHHHHHHHHhhhCchhh-ccCCc
Confidence 974 1111100111100011111123555666666655554311 1111112222233344444433 233433 11111
Q ss_pred c---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC-------------CCCCCCeEEEEec--CCHHHHHHHH
Q 014631 346 G---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM-------------AVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 346 ~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~-------------~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
. .....+.++ ...+..-..+.- .....-|.....-. .+-.+.++||+++ ++++|++.+.
T Consensus 333 ~~~~~~~~~~~~~--~~~g~~~~~~~~-~~~l~s~~a~~~~~~epsy~l~~~G~~~~~~~~~iRis~G~y~t~~di~~~~ 409 (428)
T KOG1549|consen 333 KSRYPGLVSLSFP--YVEGESLLMDLK-DVALSSGSACTSASLEPSYVLRAIGVDEDLAHSSIRISIGRYTTEEDIDYLV 409 (428)
T ss_pred ccccccceeeecc--cccCcchhhhhh-hhhhcccchhhcCCCCcchhhhhcCcchhhhcceeEEeeeeeCcHHHHHHHH
Confidence 1 111222233 100000011111 11111122211111 0112578999998 7899999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
+.+.+.++.++
T Consensus 410 ~~i~~~v~~~~ 420 (428)
T KOG1549|consen 410 DAIKKLVSLLR 420 (428)
T ss_pred HHHHHHHHhcc
Confidence 99999887654
No 186
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.95 E-value=8.8e-26 Score=212.53 Aligned_cols=309 Identities=14% Similarity=0.118 Sum_probs=212.4
Q ss_pred CCcHHHHHHHHHHHhcCC--CCCCCCC------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--
Q 014631 61 RTTPVAADAVVDAVRSAE--FDCYSPS------VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-- 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~--~~~y~~~------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-- 130 (421)
+.++.+++++.+.+.... ....... .-+.++|+.+++++ ++++++|++|+|++++++.++.++.
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 678999999998875421 1111111 11457778888877 4678899999999999999998875
Q ss_pred --CCC-CeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631 131 --RPG-ANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 131 --~~g-d~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 204 (421)
++| +.|++....|+++... +...|.+++.++.+. ++.+|++++++.++++++++++++++||||..++ +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 356 7788888888765433 345688998888753 4568999999999888999999999999999966 7
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI 284 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~ 284 (421)
++|.++|+++|+++|+|++++... ....+...+. .+++.|++|+++.+| +|++++++..... ..+
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~gp~g--~g~l~~~~~~~~~------~~~ 222 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSADRI---DLISCSGHKIYGPKG--IGALVIRKRGKPK------APL 222 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC----ccccccccCC---CEEEeehhhcCCCCc--eEEEEEccCcccc------ccc
Confidence 889999999999999999988632 2223332222 377779999976556 8999987531000 001
Q ss_pred hh--------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee--EEEEec
Q 014631 285 KG--------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM--FVMVKL 354 (421)
Q Consensus 285 ~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~--~~~~~~ 354 (421)
.. .....++++.....++.++++. .....+++.++++++++++++.|++ +|+.+...+.... ...+.+
T Consensus 223 ~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~-~~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~ 300 (353)
T TIGR03235 223 KPIMFGGGQERGLRPGTLPVHLIVGMGEAAEI-ARRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSI 300 (353)
T ss_pred CceeeCCCCcCccccCCCChHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEe
Confidence 11 0112345667777777777764 2346778889999999999999988 5887432332222 233333
Q ss_pred CcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC----CeEEEEecCCHHHHHH
Q 014631 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK----NWLRITFAIEPSALEE 405 (421)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~----~~iRi~~~~~~e~l~~ 405 (421)
+. .+..++...| ++ +|.+.+|..|... ..+|.+++.+++++..
T Consensus 301 ~~------~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~ 347 (353)
T TIGR03235 301 DG------VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARG 347 (353)
T ss_pred CC------cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCc
Confidence 31 1345555554 55 9999999988653 3678888876655543
No 187
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=1.2e-24 Score=204.53 Aligned_cols=284 Identities=20% Similarity=0.206 Sum_probs=198.3
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~ 161 (421)
....+|++.++++.+ . +..++++||++++..++ .++++||+|++++|.|.+.. ..+...|+++..++
T Consensus 52 pt~~~le~~la~l~g------~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd 122 (366)
T PRK08247 52 PTRGVLEQAIADLEG------G--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVN 122 (366)
T ss_pred chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEEC
Confidence 346899999999983 3 23477788899999876 56789999999999998753 34456888888776
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
. .|++++++.+++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|..... .. ++.
T Consensus 123 ~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~-~~---p~~--- 185 (366)
T PRK08247 123 T-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVL-QR---PLE--- 185 (366)
T ss_pred C-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc-cC---chh---
Confidence 3 38899999998899999999999998766 8999999999999999999999954221 11 211
Q ss_pred CCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
.+..+++.|+||.++.+ +.+.|++++++ .++.+.+...... ....+++.+..+...++. +..+.+
T Consensus 186 -~g~di~i~S~sK~~~g~~d~~~G~iv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t-----l~~r~~ 252 (366)
T PRK08247 186 -EGADIVIHSATKYLGGHNDVLAGLVVAKG-------QELCERLAYYQNAAGAVLSPFDSWLLIRGMKT-----LALRMR 252 (366)
T ss_pred -cCCcEEEeecceeccCCCceeeeEEecCh-------HHHHHHHHHHHHhcCCCCChHHHHHHHhccCc-----HHHHHH
Confidence 12348899999998753 56889988753 2455555544332 235566666666555542 445566
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCC-CceeEEEEecCcccccCCCChHHHHH---------HHHhhcCeeEEeCCCCCC-
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKP-EGSMFVMVKLNLSLLEGISDDMEFAL---------QLAKEESVIVLPGMAVGM- 388 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---------~ll~~~gv~v~~g~~~~~- 388 (421)
+.+++++.+.+.|+++|++..+..| .+|+|.| .++... ....++. .+....++++.|+..++.
T Consensus 253 ~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~~-----~~~~~~~~l~~~~~~~slg~~~sl~~~p~~~~~~~ 326 (366)
T PRK08247 253 QHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDEE-----WVNPFLKSLKLITFAESLGGVESFITYPATQTHAD 326 (366)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCHH-----HHHHHHHcCCcceEccCCCCCceEEECCccccccc
Confidence 7799999999999999988744455 6777776 564210 0112222 122234566667754422
Q ss_pred ------------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 389 ------------KNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 389 ------------~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
.+.+|+|++.. +.+.+++.|.+++.+
T Consensus 327 ~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~ 364 (366)
T PRK08247 327 IPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ 364 (366)
T ss_pred CCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 35799999853 566667777777654
No 188
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.94 E-value=1.6e-24 Score=203.35 Aligned_cols=327 Identities=13% Similarity=0.086 Sum_probs=213.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
-+++||-..-- +......+|+.+.+++.+..+. |. +..++++++.+++.+.+| .+++++|+|+|+|+
T Consensus 7 ~~~~ina~g~~-t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al 73 (363)
T TIGR01437 7 LKKVINASGKM-TILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI 73 (363)
T ss_pred CceEEECCcEe-ecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence 45666654333 2223345789999999998653 32 235777777777777665 34789999999999
Q ss_pred HHHHHHhcCCCC---------------eEEEcCCCCcch----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCc
Q 014631 123 QVILTVLARPGA---------------NILLPKPGFPLY----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT 183 (421)
Q Consensus 123 ~~~~~~l~~~gd---------------~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~ 183 (421)
++++.+++++|| +|+++.|.|..| ...+...|++++.++.+ +.+|++++++++++++
T Consensus 74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~----~~~d~~~le~ai~~~t 149 (363)
T TIGR01437 74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA----NECSAEQLEAAITEKT 149 (363)
T ss_pred HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC----CCCCHHHHHHhcChhc
Confidence 999999999998 999999877755 46677889999888652 3589999999999999
Q ss_pred eEEE-EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMV-IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~-~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++ +++|+||+|.+.+ +++|.++|++||+++|+|++|+.- . .....++. .+++.|+||++ +|++
T Consensus 150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~---~---~~~~~~g~---D~~~~S~~K~l--~gp~ 215 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED---L---QKYYRLGA---DLVIYSGAKAI--EGPT 215 (363)
T ss_pred eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc---h---HHHHHcCC---CEEEEeCCccc--CCCc
Confidence 8765 5678999999866 677899999999999999999721 1 11112222 27778999985 5778
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
.|+++++ +++++.+....... .........++.++++... ....+..+.+.++++.+.+.|+++||+.
T Consensus 216 ~G~l~~~--------~~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~-~~~~~~~~~~~~~~~~l~~~L~~i~g~~ 286 (363)
T TIGR01437 216 SGLVLGK--------KKYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYL-STGKESGAEMVAKLTPFIEALNTLKGVS 286 (363)
T ss_pred eEEEEEc--------HHHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHH-ccCcccHHHHHHHHHHHHHHHhcCCCeE
Confidence 9998874 23445443221110 0111112233333333211 1112223344456778999999999987
Q ss_pred ccCC-CCcee---EEEEecCcccccCCCChHHHHHHHHhhcC--eeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHH
Q 014631 340 CPRK-PEGSM---FVMVKLNLSLLEGISDDMEFALQLAKEES--VIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKA 412 (421)
Q Consensus 340 ~~~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--v~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~ 412 (421)
+... +..+. ...+.++... ...+..++...| ++++ |.+++ .+...+.+|+++. ++++|++.++++|.+
T Consensus 287 ~~~~~~~~~~~~~~~~v~~~~~~--~g~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~l~~ 361 (363)
T TIGR01437 287 ASIVQDEAGRDIARAEIRFDESE--LGMTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVERIRE 361 (363)
T ss_pred EEEecCCCCCcCceEEEEEeccC--CCCCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHHHHH
Confidence 4311 11111 1222333210 012466776655 6667 55554 4566788999997 779999999999987
Q ss_pred HH
Q 014631 413 FC 414 (421)
Q Consensus 413 ~~ 414 (421)
++
T Consensus 362 ~~ 363 (363)
T TIGR01437 362 IV 363 (363)
T ss_pred hC
Confidence 53
No 189
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.94 E-value=2.5e-24 Score=206.08 Aligned_cols=353 Identities=18% Similarity=0.138 Sum_probs=217.1
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-....+ ..+|.+.+++.+++.+.....+... ..+.+..+++.+.+..+ ....+.++++++|++
T Consensus 30 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~ql~~~~~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGse 105 (420)
T TIGR00700 30 VDGNRLIDFASGIAVLNIG-HSHPRVVDAVRTQVAEFTHTCFMVT--PYEGYVALAEKLNRIAP-GSGPKKSVFFNSGAE 105 (420)
T ss_pred CCCCEEEECccCHHhccCC-CCCHHHHHHHHHHHHhccCcccccc--CChHHHHHHHHHHHhCC-CCCCCEEEEeCCcHH
Confidence 3588999998885443332 4678999999999987432222111 12333344444443222 112368999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCCC---------CccCCHHHH
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPEK---------GWEVDLDGL 175 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~---------~~~~d~e~l 175 (421)
|+..+++... ..| .+|+....+|++....+..... ++..++.+... .+.-+++.+
T Consensus 106 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (420)
T TIGR00700 106 AVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAA 185 (420)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHH
Confidence 9999988653 123 5788899999987654443211 11112221000 000124556
Q ss_pred Hhhhc----cCceEEEEeCC-CCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 176 EALAD----ENTVAMVIVNP-GNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 176 ~~~~~----~~~~~i~~~~p-~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
++.+. ++..+.++..| +..+|..+++ +.+++|.++|++||+++|+||+|+++.+.|.. ..+..++.... +
T Consensus 186 ~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~pD---i 261 (420)
T TIGR00700 186 RAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPEPD---L 261 (420)
T ss_pred HHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCCCC---E
Confidence 65542 23345566667 6677887654 55999999999999999999999998877652 22233322222 3
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADI 327 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~ 327 (421)
.+|||.++ +|+|+||++++ +++++.+.... ..+.+.+++++.++.++|+...+ ...+...+.-+..++.
T Consensus 262 ~~lsK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~~ 332 (420)
T TIGR00700 262 ITTAKSLA-DGLPLSGVTGR--------AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTDR 332 (420)
T ss_pred EEeecccc-CCcceEEEEec--------HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 46999986 89999999996 35766665432 24567889999999888764222 2233333333334444
Q ss_pred HHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHH
Q 014631 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSAL 403 (421)
Q Consensus 328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l 403 (421)
+.+...++|.+..+ .+. |.++|+++..... +.......++.. +.++||.+.|+..|+ +++|++++ .+++++
T Consensus 333 L~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~~l 407 (420)
T TIGR00700 333 LTTLKAVDPRIGDV-RGL-GAMIAVELVDPGTTEPDAGLAERIATA-AHAAGLLLLTCGMFG--NIIRFLPPLTIGDELL 407 (420)
T ss_pred HHHHHhhCCCEEEe-ecc-ceEEEEEEecCCCCCccHHHHHHHHHH-HHHCCeEEeccCCCC--CEEEEECCCCcCHHHH
Confidence 44444445555433 444 6788887742110 000012233333 367899999987664 78999986 689999
Q ss_pred HHHHHHHHHHHH
Q 014631 404 EEGLGRIKAFCQ 415 (421)
Q Consensus 404 ~~~~~~l~~~~~ 415 (421)
++++++|.+++.
T Consensus 408 ~~~~~~l~~~l~ 419 (420)
T TIGR00700 408 SEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHhh
Confidence 999999999874
No 190
>PLN02242 methionine gamma-lyase
Probab=99.94 E-value=1.2e-24 Score=206.53 Aligned_cols=217 Identities=18% Similarity=0.198 Sum_probs=164.5
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-----hhcCceeE
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-----RHTRLEIR 158 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-----~~~g~~~~ 158 (421)
+.+...+|++.+|++.+ .+.+++++||++|+..++.+++++||+|+++.|.|.++...+ +..|.+++
T Consensus 74 ~~Pt~~~LE~~lA~l~g--------~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~ 145 (418)
T PLN02242 74 FNPTVLNLGRQMAALEG--------TEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTT 145 (418)
T ss_pred CChhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEE
Confidence 34457899999999873 356778999999999999999999999999999998876554 34677766
Q ss_pred eeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc
Q 014631 159 HFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM 237 (421)
Q Consensus 159 ~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 237 (421)
.++. .|++++++++++ ++++|++++|+||||.+. ++++|+++|+++|+++|+|++|+.+.+..
T Consensus 146 ~~d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~---dl~~I~~la~~~gi~livDea~~~~~~~~------ 209 (418)
T PLN02242 146 FVDI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVA---DIPELARIAHEKGVTVVVDNTFAPMVLSP------ 209 (418)
T ss_pred EcCC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCccc---CHHHHHHHHHHhCCEEEEECCCCccCCCH------
Confidence 5543 288999999987 499999999999999995 68999999999999999999997654321
Q ss_pred cccCCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhH
Q 014631 238 GVFGSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 238 ~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
..++ ..+++.|+||.++++|.+ .||++++ +++++.+..... ...+++...+.+...+... ..
T Consensus 210 ~~~g---~divv~S~SK~l~g~g~~~gG~iv~~--------~~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~t 275 (418)
T PLN02242 210 ARLG---ADVVVHSISKFISGGADIIAGAVCGP--------AELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PH 275 (418)
T ss_pred HHcC---CcEEEEeCccccCCCCCceEEEEEcC--------HHHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---Cc
Confidence 1222 348899999999888887 5888875 345565554422 1234455566665555432 34
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+..+.++++++++.+.+.|+++ ++.
T Consensus 276 l~~r~~~~~~~a~~la~~L~~~-~~~ 300 (418)
T PLN02242 276 LSLRMKEHCRRAMEYAKRMKEL-GLK 300 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCE
Confidence 5567778999999999999987 455
No 191
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.94 E-value=2e-24 Score=204.95 Aligned_cols=217 Identities=15% Similarity=0.134 Sum_probs=162.5
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEe
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRH 159 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 159 (421)
+..+..+|+++++++.+ .+++++++||++|+..++.+++++||+|+++.|.|..+... +...|++++.
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 56678999999999983 24678889999999999988899999999999999765443 4668888888
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRM 237 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~ 237 (421)
++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|+...+. .++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l 199 (400)
T PRK06234 134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL 199 (400)
T ss_pred ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch
Confidence 764 2789999999889999999999999999965 88888889887 9999999999875432 122
Q ss_pred cccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhH
Q 014631 238 GVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 238 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
..+ ..+++.|+||.++++|.++ ||+++++ ++.+.+.... ......++.....+...|+.
T Consensus 200 -~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----- 262 (400)
T PRK06234 200 -QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----- 262 (400)
T ss_pred -hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence 122 2388999999998888775 8888752 4555554321 12234555555544444432
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+..+.++.+++...+.+.|+++|.+.
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V~ 288 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAVE 288 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 44556666788888888888876654
No 192
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.94 E-value=1.2e-23 Score=204.00 Aligned_cols=340 Identities=14% Similarity=0.111 Sum_probs=226.6
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC---CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS---PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~---~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
.++.|.+. ...++.+.+++.+.......+.|. ..+|..+++..+.+++.+.+|.+ ...+..++|+++.+..
T Consensus 72 ~~g~G~~~----~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~ 145 (481)
T PRK04366 72 FYPLGSCT----MKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTG 145 (481)
T ss_pred eecCcccC----CCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHH
Confidence 36667655 467788888887762222445773 45688899999999999988743 3344445555555443
Q ss_pred H--HH-HhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631 125 I--LT-VLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN 197 (421)
Q Consensus 125 ~--~~-~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~ 197 (421)
+ ++ .+.++|| +|+++++.|+.+...+...|++++.++.+ .++.+|++++++.++++++++++++|+ |||.
T Consensus 146 l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~ 222 (481)
T PRK04366 146 LLMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGL 222 (481)
T ss_pred HHHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Cccc
Confidence 2 33 3456776 99999999999999999999999999874 346789999999998889999999988 9996
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCc
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSG 273 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~ 273 (421)
. ..++++|+++|+++|+++++|+++..... |. .+...++. .++++|.+|+|+.| |..+|++++++
T Consensus 223 ~--~~dl~eI~~~a~~~gal~iVD~a~~~~~~-g~--~~~~~~Ga---D~~~~~~hK~l~~P~g~Ggp~~G~l~~~~--- 291 (481)
T PRK04366 223 F--ERNILEIAEIVHEAGGLLYYDGANLNAIL-GK--ARPGDMGF---DVVHLNLHKTFSTPHGGGGPGSGPVGVKE--- 291 (481)
T ss_pred c--chHHHHHHHHHHHcCCEEEEEecChhhhc-cc--CCccccCC---CEEEEechhhcCCCCCCCCCCeeeeeehh---
Confidence 5 35799999999999999999999864211 21 12223333 37888999998754 44578888753
Q ss_pred chhHHHHHHHHhhh--------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 274 ILQELRIVDSIKGY--------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 274 ~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
++.+.+... +...++.+.....++..++.....+++.++.++...+.+++.+.|+
T Consensus 292 -----~~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~ 366 (481)
T PRK04366 292 -----ELAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLK 366 (481)
T ss_pred -----hhHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 222222100 0001122334444555555544567778888888889999999998
Q ss_pred cCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEec--CCHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFA--IEPSALEEGLG 408 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~--~~~e~l~~~~~ 408 (421)
++..+. .+. ..+ +.+.++.....+ .+..++..+| .++||.+....... ..+.+|++++ ++++||+++++
T Consensus 367 ~~~~~~---~~~-~~~~~~~~~~~~~~~~g-~~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~ 440 (481)
T PRK04366 367 DIYDLP---YDR-PCMHEFVLSGKKLKETG-VRTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIA 440 (481)
T ss_pred hhCccc---CCC-CeeEEEEEECccccccC-CCHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHH
Confidence 862332 121 111 222222101111 1356666665 66799865222212 2568999997 79999999999
Q ss_pred HHHHHHHHhh
Q 014631 409 RIKAFCQRHA 418 (421)
Q Consensus 409 ~l~~~~~~~~ 418 (421)
.|+++.++..
T Consensus 441 ~l~~i~~~~~ 450 (481)
T PRK04366 441 AMKQIAEEAK 450 (481)
T ss_pred HHHHHHHHHH
Confidence 9999987764
No 193
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.94 E-value=1.6e-23 Score=200.05 Aligned_cols=350 Identities=15% Similarity=0.157 Sum_probs=219.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-....+ ..+|.+.+++.+++.+.....+.. ...+.+..+++.+.+..+ ....+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK09792 37 VEGNEYIDFAAGIAVLNTG-HRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEccCchhhhcCC-CCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCChHH
Confidence 4588999998775443322 578999999999998742212211 123444455555544222 112368999999999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccC----CHHHHHhhhc
Q 014631 121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEV----DLDGLEALAD 180 (421)
Q Consensus 121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----d~e~l~~~~~ 180 (421)
|+..+++.... .| .+|+....+|++....+... +. .+..+|.+.+. .++ +++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~~~~ 191 (421)
T PRK09792 113 AVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIERLFK 191 (421)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHHHHH
Confidence 99999886532 23 57999999999875444322 11 11222221111 112 2467777664
Q ss_pred ----cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 181 ----ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 181 ----~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
++..+.++..| ++++|..+ |++.+++|.++|++||+++|+||+++++.+.|.. ..+..++.... +.+|+|
T Consensus 192 ~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t~gK 267 (421)
T PRK09792 192 SDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMTMAK 267 (421)
T ss_pred hccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEEeeh
Confidence 23334445555 88999865 8899999999999999999999999999887754 34444432222 458999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l 332 (421)
.++ +|+|+||++++ .++++.+.... ..+.+.+++.++++.++++...+ ..+++.+ .+.++.....+.|
T Consensus 268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l~~l 337 (421)
T PRK09792 268 SLA-GGMPLSGVVGN--------ANIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTLIDA 337 (421)
T ss_pred hhc-CCCceEEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHHHHH
Confidence 964 88999999985 35666654433 23557888999977777765332 2333333 3333333333333
Q ss_pred -hcCCCccccCCCCc-eeEEEEecCccccc--CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631 333 -KEIPCITCPRKPEG-SMFVMVKLNLSLLE--GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG 406 (421)
Q Consensus 333 -~~~~g~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~ 406 (421)
+++|.+. .+.+ |+++|++++..... .......++.. +.++||.+.+... .++.+|+.++ .++++++++
T Consensus 338 ~~~~p~v~---~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~-~~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei~~~ 411 (421)
T PRK09792 338 KESVPAIA---AVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQR-ALAQGLLLLTCGA--YGNVIRFLYPLTIPDAQFDAA 411 (421)
T ss_pred HHhCCCcc---eecccceEEEEEecCCccCCcchHHHHHHHHH-HHHCCcEEeecCC--CCCEEEEeCCCcCCHHHHHHH
Confidence 3354433 4555 89999999643100 00012344444 4668999964211 2578999987 789999999
Q ss_pred HHHHHHHHH
Q 014631 407 LGRIKAFCQ 415 (421)
Q Consensus 407 ~~~l~~~~~ 415 (421)
+++|.++++
T Consensus 412 ~~~l~~~l~ 420 (421)
T PRK09792 412 MKILQDALS 420 (421)
T ss_pred HHHHHHHHh
Confidence 999999874
No 194
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.94 E-value=1.1e-23 Score=199.89 Aligned_cols=347 Identities=14% Similarity=0.135 Sum_probs=226.7
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|...... ...+|.+.+++.+++++.. .++.. -..+....+++.+.+..+ ..+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~-~~~~~~~~la~~L~~~~~---~~~~v~f~~sGse 109 (408)
T PRK04612 37 DQGREYLDLAAGIAVCGL-GHNDPDLVAALTEQAGKLW--HTSNV-FYSAPPLKLAEELVTASR---FAEKVFLCNSGTE 109 (408)
T ss_pred CCCCEEEEcCccHhhccC-CCCCHHHHHHHHHHHHhcc--ccccc-cCCHHHHHHHHHHHhhCC---CCCEEEEcCchHH
Confidence 358899999887544323 2578999999999998632 12211 123444555666544322 1268999999999
Q ss_pred HHHHHHHHhcC--------CC-CeEEEcCCCCcchHHHHhhcCceeE-e---eeccCC---CCccCCHHHHHhhhccCce
Q 014631 121 AIQVILTVLAR--------PG-ANILLPKPGFPLYEANARHTRLEIR-H---FDLLPE---KGWEVDLDGLEALADENTV 184 (421)
Q Consensus 121 al~~~~~~l~~--------~g-d~Vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~---~~~~~d~e~l~~~~~~~~~ 184 (421)
|+..+++.... ++ .+|+....+|++....+........ . -+..+. -.+ .|++.+++.+.++..
T Consensus 110 A~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~~~~~~~ 188 (408)
T PRK04612 110 ANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDF-NDVEALEAAMAGGDV 188 (408)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCC-CCHHHHHHhhCCCCE
Confidence 99999976431 22 4689999999988655443221110 0 111110 011 278889888876677
Q ss_pred EEEEeCCCCCcccccC--HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 185 AMVIVNPGNPCGNVFT--YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++..|.+++|-+++ .+.+++|.++|++||+++|+||+|+++.+.|..+ .... .+....+.+|||.++ +|+|
T Consensus 189 aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~-a~~~---~~~~pdi~t~~K~l~-~G~p 263 (408)
T PRK04612 189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLF-AHWQ---EQVTPDIVTLAKALG-GGFP 263 (408)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchh-hhhh---cCCCCCEEEEcchhc-CCCc
Confidence 8889999877775544 5789999999999999999999999887766432 1111 122345679999975 7899
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE----IPC 337 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g 337 (421)
+|+++++ +++.+.+.... ..+.+.+++.+.++.++|+...+ ++..++.+++.+++.+.|++ .+-
T Consensus 264 iga~~~~--------~~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~ 332 (408)
T PRK04612 264 IGAMLAG--------PKVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGV 332 (408)
T ss_pred eEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 9999985 24566555432 23456789999999988875332 23444555555555555544 322
Q ss_pred ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
+..+ .+. |.+..+++.... ......++ ..+.++||.+.+.. .+.+|+.++ .+++++++++++|.+++.
T Consensus 333 i~~v-rg~-Gl~~~i~~~~~~---~~~a~~i~-~~l~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~ 402 (408)
T PRK04612 333 FAQV-RGR-GLMLGAVLAPAH---AGQAGAIL-DLAAEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA 402 (408)
T ss_pred eeee-ecc-ceEEEEEecCch---hhHHHHHH-HHHHHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence 2212 333 556666664210 00133444 44577899997742 378999987 789999999999999999
Q ss_pred HhhhcC
Q 014631 416 RHAKQQ 421 (421)
Q Consensus 416 ~~~~~~ 421 (421)
++-+++
T Consensus 403 ~~~~~~ 408 (408)
T PRK04612 403 DYVAQR 408 (408)
T ss_pred HHhhcC
Confidence 877664
No 195
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.94 E-value=1.9e-23 Score=201.58 Aligned_cols=357 Identities=14% Similarity=0.126 Sum_probs=216.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|+.++||..|.-....+ ..+|.+.+++.+++++...... .....+.+..+++.+....+.+ ..+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGse 126 (451)
T PRK06918 51 VDGNQYIDFAGAIGTINVG-HSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGAE 126 (451)
T ss_pred CCCCEEEEcCCchhhcCCC-CCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcHH
Confidence 3488899998886443333 5789999999999987422111 1112244455555554433211 1258999999999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCce--------------eEeeeccCC--CCccCC--------HHH
Q 014631 121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRLE--------------IRHFDLLPE--KGWEVD--------LDG 174 (421)
Q Consensus 121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~d--------~e~ 174 (421)
|+..+++.... .| .+|+....+|++....+...... +..+|.... ...+.. .+.
T Consensus 127 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (451)
T PRK06918 127 AVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEE 206 (451)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHH
Confidence 99999886531 23 57888999999886555432111 111221100 001111 122
Q ss_pred HHhhh----ccCceEEEEeCCCCC-cccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 175 LEALA----DENTVAMVIVNPGNP-CGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 175 l~~~~----~~~~~~i~~~~p~np-tG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
+++.+ .++..+.++..|... .|.+++ .+.+++|.++|++||+++|+||+|.++.+.|.. .++..++....
T Consensus 207 ~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD--- 282 (451)
T PRK06918 207 FKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD--- 282 (451)
T ss_pred HHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC---
Confidence 33322 234566678888544 466554 555999999999999999999999999877753 34444442222
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH-HHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR-DTAD 326 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~ 326 (421)
+.|+||.++ +|+|+||++++ +++++.+.... ..+.+.+++.+.++.++++...+..+.++.+.+. ..++
T Consensus 283 i~t~sK~l~-~G~pig~v~~~--------~~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~ 353 (451)
T PRK06918 283 LITVSKSLG-AGVPISGVIGR--------KEIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRAIELGKVVMN 353 (451)
T ss_pred EEeeehhhc-CCCccEEEEEc--------HHHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
Confidence 448999976 89999999996 35666665433 2456788999999888776432333333222222 2222
Q ss_pred HHHHHhhcCCCccccCCCCceeEEEEecCccc--ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631 327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA 402 (421)
Q Consensus 327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~ 402 (421)
.+.+...+.+.+..+ .+.++++.|....... .++......+.. .+.++||.+.|+..|+ +.+|++++ .++++
T Consensus 354 ~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~Gvlv~~~~~~~--~~lrl~p~l~~t~~~ 429 (451)
T PRK06918 354 RFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICK-EANKRGLLLLSAGTYG--NVIRVLMPLVITDEQ 429 (451)
T ss_pred HHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHH-HHHHCCeEEeecCCCC--CEEEEECCCccCHHH
Confidence 333222334433323 4566666654432110 000001223333 3467899999976553 78999986 78999
Q ss_pred HHHHHHHHHHHHHHhh
Q 014631 403 LEEGLGRIKAFCQRHA 418 (421)
Q Consensus 403 l~~~~~~l~~~~~~~~ 418 (421)
+++++++|.++++++-
T Consensus 430 id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 430 LEEGLTIIEESLQACY 445 (451)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998753
No 196
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.94 E-value=7.4e-24 Score=202.82 Aligned_cols=326 Identities=12% Similarity=0.102 Sum_probs=216.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE----FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
+.+++|+++... +.|+.+.+++.+.+.... ...+....+...+.+.+.+ + +.+ ++++++|++|+|+|
T Consensus 26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~--g~~~~~v~~~~~~t 96 (406)
T TIGR01814 26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLV--GAKEDEVVVMNTLT 96 (406)
T ss_pred CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-ccc--CCCCCcEEEeCCch
Confidence 678999988733 458889999887765311 0111100111122222222 1 223 36789999999999
Q ss_pred HHHHHHHHHhcCCC---CeEEEcCCCCcchH----HHHhhcCcee----EeeeccCCCCccCCHHHHHhhh---ccCceE
Q 014631 120 QAIQVILTVLARPG---ANILLPKPGFPLYE----ANARHTRLEI----RHFDLLPEKGWEVDLDGLEALA---DENTVA 185 (421)
Q Consensus 120 ~al~~~~~~l~~~g---d~Vl~~~p~y~~~~----~~~~~~g~~~----~~~~~~~~~~~~~d~e~l~~~~---~~~~~~ 185 (421)
++++.++.++.+++ +.|++.+.+|++.. ..++..|+++ +.++. +.++.++++++++.+ .+++++
T Consensus 97 ~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~--~~~g~~~~~~l~~~~~~~~~~t~l 174 (406)
T TIGR01814 97 INLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP--REEETLRLEDILDTIEKNGDDIAV 174 (406)
T ss_pred HHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc--CCCCccCHHHHHHHHHhcCCCeEE
Confidence 99999999876664 36888889998743 3345668776 34433 334457889888876 367889
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLG 264 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G 264 (421)
+++++++|.||..++ +++|.++|+++|+++++|++|+. |.....+..++.+ +++.|.+|+++ .|| |
T Consensus 175 v~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gvD---~~~~s~hK~l~g~pG---~ 241 (406)
T TIGR01814 175 ILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGVD---FACWCTYKYLNAGPG---A 241 (406)
T ss_pred EEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCCCC---EEEEcCccccCCCCC---e
Confidence 999999999999965 88899999999999999999998 4333444444433 88899999974 344 4
Q ss_pred EEEeeCCCcchhHHHHHHHHhh------------------------hcccccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631 265 WLVTSDPSGILQELRIVDSIKG------------------------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (421)
.+++..+. ...+.. .....++++.....++.++++...+..+++.+++
T Consensus 242 ~l~v~~~~--------~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (406)
T TIGR01814 242 GAFVHEKH--------AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKK 313 (406)
T ss_pred EEEEehhh--------hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 34443211 111110 0011246777787888878876445567888899
Q ss_pred HHHHHHHHHHHhhcC----CCccccCCCCc----eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631 321 LRDTADICYDRIKEI----PCITCPRKPEG----SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~----~g~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i 392 (421)
.+.+.+++.+.|+++ +++.+. .|.. +..+.+.++. +..++...| .++||.+... .++.+
T Consensus 314 ~~~l~~~l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~~-------~~~~~~~~L-~~~gi~v~~~----~~~~i 380 (406)
T TIGR01814 314 SLLLTDYLEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHPV-------PGKAVFQAL-IKRGVIGDKR----EPSVI 380 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEecC-------CHHHHHHHH-HHCCEEEecc----CCCeE
Confidence 999999999988764 356633 3321 2344455541 355666665 6679987532 24689
Q ss_pred EEEe-c--CCHHHHHHHHHHHHHHH
Q 014631 393 RITF-A--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 393 Ri~~-~--~~~e~l~~~~~~l~~~~ 414 (421)
|+|+ + ++++|++++++.|++++
T Consensus 381 RiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 381 RVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEechhccCCHHHHHHHHHHHHHHh
Confidence 9998 5 69999999999998865
No 197
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.94 E-value=2.9e-23 Score=196.17 Aligned_cols=327 Identities=15% Similarity=0.095 Sum_probs=205.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-------CCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-------EFDCYS------PSVGILPARRAIADYLNSELPCKLSP 109 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~ 109 (421)
...+++|+..+ |.++..++.+.+++.+++... ..+..+ ...-+.++|+.+|++++ . +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~------~-~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHG------A-P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C
Confidence 45689999888 666778888888888887652 111111 12236788888888884 2 3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc------cCc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ENT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------~~~ 183 (421)
+.+++++|+ .++..++..+.++||.|++....|.+....+.......+.++. .|++++++.++ +++
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFRH-------NDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHhhhccCCCc
Confidence 346666665 4555556666678888888888888777777655433333321 47888888775 235
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
+++++++++|++|.+.| +++|.++|+++|+++++|++|+...++.........+...+..+.+.||||.+|..| .
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~ 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--A 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--e
Confidence 56678899999999976 888889999999999999999874432211111111221122356789999988777 3
Q ss_pred EEEEeeCCCcchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631 264 GWLVTSDPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITC 340 (421)
Q Consensus 264 G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 340 (421)
|.+..+ ++.+.+... .....+.+++...++.++++..... .+..+++++++++++.+.|... +
T Consensus 220 ~vl~~~---------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~--- 285 (370)
T PRK05937 220 ALLSSS---------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A--- 285 (370)
T ss_pred EEEcCH---------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence 333321 233333211 1122345666666665666532212 2445677788888888777532 1
Q ss_pred cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+. ....+.++.. ....+. ..+.++||.+.... +...+.+|++++ +++||++++++.|.++++++.
T Consensus 286 ---~~--~~~~i~~~~~------~~~~~~-~~L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 286 ---PG--CVQPIFLPGI------SEQELY-SKLVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred ---CC--CEEEEEeCCh------hHHHHH-HHHHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 11 1111333321 234444 45577899886422 223468999998 899999999999999998765
Q ss_pred h
Q 014631 419 K 419 (421)
Q Consensus 419 ~ 419 (421)
+
T Consensus 353 ~ 353 (370)
T PRK05937 353 K 353 (370)
T ss_pred C
Confidence 4
No 198
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.94 E-value=3.9e-24 Score=182.67 Aligned_cols=377 Identities=15% Similarity=0.164 Sum_probs=267.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCC-cHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRT-TPVAADAVVDAVRS-AEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~i 95 (421)
+++..++..+..+.+.+.++. ++..+||++|.-....+-|+ .|.++++-....+. ...+.|-|..|++.++++.
T Consensus 8 ~I~~a~p~~vf~~~~~y~~d~----~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A 83 (410)
T KOG1412|consen 8 NIPVAPPIEVFKLNASYGEDL----DPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAA 83 (410)
T ss_pred CCccCChHHHHhhHHHhcccC----CcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhh
Confidence 466777888999998888777 67789999997554444444 34444433333322 2346899999999999999
Q ss_pred HHHHhhhCCCCCCCCcEE--EcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC-ceeEeeeccCCCCccC
Q 014631 96 ADYLNSELPCKLSPDDVY--LTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTR-LEIRHFDLLPEKGWEV 170 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~--~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g-~~~~~~~~~~~~~~~~ 170 (421)
++.+-.........++++ -+-+||.|+.+....+. -...+|.+++|+|..+..+++..| .++..++.-..+.-.+
T Consensus 84 ~el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~ 163 (410)
T KOG1412|consen 84 TELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCV 163 (410)
T ss_pred HHHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCcee
Confidence 999855444345556653 34578889888877663 245689999999999999999999 4566676655555678
Q ss_pred CHHHHHhhhccCc--eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCC
Q 014631 171 DLDGLEALADENT--VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTV 244 (421)
Q Consensus 171 d~e~l~~~~~~~~--~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~ 244 (421)
|+|.+...+...+ .++++..+ +||||+-.+.++|.+|+++.++.+.+.++|-+|+++..+... .+.+..+ +...
T Consensus 164 d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~ 243 (410)
T KOG1412|consen 164 DLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGF 243 (410)
T ss_pred cHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCC
Confidence 9999988775432 34455555 999999999999999999999999999999999998754322 1222222 2234
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--hhHH---HHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--EDFF---SKIV 318 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~---~~~~ 318 (421)
.++++.||+|.||+.+-|+|-+.+--.+... .+.+..++.... ...+.|+......+.+.|+... +.|. ..+.
T Consensus 244 e~fv~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Ms 322 (410)
T KOG1412|consen 244 ELFVCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMS 322 (410)
T ss_pred eEEEEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 5788999999999999999986553222111 123344444332 3456888888899999998633 3343 3334
Q ss_pred HHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 319 DILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
.+++++|..+++.|..+ || |+-+ ..+.|+|.+..+. + ..+..|.+++.|++.+.. ||+
T Consensus 323 sRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RIn 383 (410)
T KOG1412|consen 323 SRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RIN 383 (410)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcHHHH-HhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEe
Confidence 56777777777777754 55 4422 4567888887663 3 456778888999998643 999
Q ss_pred ec-CCHHHHHHHHHHHHHHHHHhh
Q 014631 396 FA-IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 396 ~~-~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++ .....++.+..+|.++++.+.
T Consensus 384 isGLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 384 ISGLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred eeccccccHHHHHHHHHHHHHhhc
Confidence 97 777899999999999988764
No 199
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=1.8e-23 Score=198.06 Aligned_cols=217 Identities=19% Similarity=0.227 Sum_probs=156.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~ 161 (421)
....+|++.+|++.+ .+ ...++++|+.++..++.+++++||+|+++.+.|.++... +...|+++..++
T Consensus 65 p~~~~Le~~lA~l~G------~~--~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd 136 (398)
T PRK07504 65 PTVDMFEKRMCALEG------AE--DARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVD 136 (398)
T ss_pred chHHHHHHHHHHHhC------CC--eeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEEC
Confidence 346899999999973 32 334577888899888878889999999999999876443 345688777764
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
..|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+...+. .++ .++
T Consensus 137 -------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~----~~~-~~g 201 (398)
T PRK07504 137 -------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ----KPL-ELG 201 (398)
T ss_pred -------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----Cch-hhC
Confidence 26899999999889999999999999999965 888889999999999999999864321 122 222
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (421)
..+++.|+||.++++|.++|++++.+++ .+.+.+.... ......+++....+...|+. +..+.++
T Consensus 202 ---aDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~t-----l~~R~~~ 267 (398)
T PRK07504 202 ---AHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLET-----LPVRVRQ 267 (398)
T ss_pred ---CCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccch-----HHHHHHH
Confidence 2378899999999999999755543321 1222233222 22234555555554444433 5666677
Q ss_pred HHHHHHHHHHHhhcCCCcc
Q 014631 321 LRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~ 339 (421)
.+++...+.+.|+++|++.
T Consensus 268 ~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 268 QTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHcCCCcc
Confidence 7788888999999887765
No 200
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.94 E-value=1.6e-23 Score=198.05 Aligned_cols=220 Identities=18% Similarity=0.214 Sum_probs=159.6
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~ 162 (421)
...++++.++++++ .+++++++||++|+..++.+++++||+|+++.+.|.+... .+...|++++.++.
T Consensus 62 ~~~~le~~la~l~g--------~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 62 TVTMFQERLAALEG--------AEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 36789999999873 3468899999999999999999999999999999977543 45568988888764
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
+ |++++++.+++++++|++.+|+||+|.+. ++++|.++|+++|+++|+|++|+..... .++ ..+.
T Consensus 134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~---dl~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g~ 198 (390)
T PRK08133 134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELA---DIAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLGA 198 (390)
T ss_pred C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcC---CHHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhCC
Confidence 2 78899999988999999999999999996 4789999999999999999998654321 122 1222
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
.+++.|+||.++.+|.++|++++.+ +++++.+...... ....++..+..+...+ +.+..+.++.
T Consensus 199 ---Divv~S~sK~~~g~g~~~GG~vv~~-------~~~~~~~~~~~~~~g~~~~~~~a~~~l~gl-----~tl~~R~~~~ 263 (390)
T PRK08133 199 ---DVVIHSATKYLDGQGRVLGGAVVGS-------KELMEEVFGFLRTAGPTLSPFNAWVFLKGL-----ETLSLRMEAH 263 (390)
T ss_pred ---cEEEeecceeecCCcceEeEEEEcC-------HHHHHHHHHHHHHhCCCCCHHHHHHHHccc-----chHHHHHHHH
Confidence 3778999999998999885544432 2344444433322 2234444433322222 2456666777
Q ss_pred HHHHHHHHHHhhcCCCccccCCC
Q 014631 322 RDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.+++..+.+.|+++|++..+..|
T Consensus 264 ~~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 264 SANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHHhCCCeeEEECC
Confidence 78888999999988776544343
No 201
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.93 E-value=8.5e-24 Score=200.04 Aligned_cols=289 Identities=15% Similarity=0.137 Sum_probs=193.7
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCce
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLE 156 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~ 156 (421)
+|+ .....+|++.+|++.+ .+..+++++|+.++..++.+++++||+|+++.+.|.+...... ..|.+
T Consensus 57 r~~-~pt~~~Le~~lA~l~G--------~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~ 127 (386)
T PRK06767 57 RLG-NPTVKLFEERMAVLEG--------GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMIT 127 (386)
T ss_pred CCC-CcchHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeE
Confidence 443 3446899999999983 2345555666789999998889999999999999987655443 34554
Q ss_pred eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 236 (421)
+..++. .|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... + .+
T Consensus 128 ~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~-~---~p 193 (386)
T PRK06767 128 HSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYL-Q---RP 193 (386)
T ss_pred EEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCccccc-C---Cc
Confidence 444322 3789999998889999999999999999965 78888899999999999999975321 1 12
Q ss_pred ccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHh-hhcc-cccCCchHHHHHHHHHhhccchhH
Q 014631 237 MGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIK-GYLN-ISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
+ ..+. .+++.|+||.++++|.++ |++++++ ++++.+. .... .....+++.+.++...|+ .
T Consensus 194 l-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~-----t 256 (386)
T PRK06767 194 L-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK-----T 256 (386)
T ss_pred h-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC-----c
Confidence 2 1222 277889999998888885 8888753 3333332 2222 222345555554444343 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCITCPRKPE----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 383 (421)
+..+.++.+++...+.+.|+++|++..+..|. .|-.+.++++... .+...|+..+ +..++.+.-|
T Consensus 257 l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~~----~~~~~f~~~l-~~~~~~~s~G 331 (386)
T PRK06767 257 LAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGK----EETQAFINDL-HFITIAVSLG 331 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCCH----HHHHHHHHhC-CccEEecCCC
Confidence 45566788899999999999999987544441 2234555664211 1345666654 6667666555
Q ss_pred CCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 384 MAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 384 ~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
.... .++.+|+|++.. +.+.+++.|.+++..
T Consensus 332 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~ 385 (386)
T PRK06767 332 DTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALKK 385 (386)
T ss_pred CcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 3210 035799999953 456667777776653
No 202
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.9e-23 Score=196.59 Aligned_cols=214 Identities=18% Similarity=0.209 Sum_probs=159.3
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~~ 163 (421)
...|++.+|++.+ . ++. +++++|++++..++.+++++||+|+++.|.|.+. ...+...|.++..++.
T Consensus 62 ~~~Le~~lA~l~g------~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~- 132 (405)
T PRK08776 62 RDLLGEALAELEG------G-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADL- 132 (405)
T ss_pred HHHHHHHHHHHhC------C-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECC-
Confidence 4688888888763 2 334 5555668999999999999999999999999873 3444556777776653
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
.|++++++.++++++++++++|+||||.+ .++++|+++|+++|+++|+|++|.... ...++ .++.+
T Consensus 133 ------~d~~~l~~~i~~~tklV~l~~P~NPtG~v---~dl~~I~~la~~~gi~vIvD~a~a~~~----~~~pl-~~gaD 198 (405)
T PRK08776 133 ------TDPRSLADALAQSPKLVLIETPSNPLLRI---TDLRFVIEAAHKVGALTVVDNTFLSPA----LQKPL-EFGAD 198 (405)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCcc---CCHHHHHHHHHHcCCEEEEECCCcccc----cCCcc-cccCC
Confidence 37889999888889999999999999998 568999999999999999999997632 12232 22322
Q ss_pred CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
+++.|.+|.++.+ +...|++++++ +++.+++...... ..+.+++.+.++...+ .+++.+.++.
T Consensus 199 ---ivv~S~tK~l~g~~~~~~G~vv~~~-------~~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-----~tl~~r~~~~ 263 (405)
T PRK08776 199 ---LVLHSTTKYINGHSDVVGGAVVARD-------AELHQQLVWWANALGLTGSPFDAFLTLRGL-----RTLDARLRVH 263 (405)
T ss_pred ---EEEecCceeecCCCCceEEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----CcHHHHHHHH
Confidence 7889999998765 46788887754 2455555443322 2345666666655444 4577888899
Q ss_pred HHHHHHHHHHhhcCCCcc
Q 014631 322 RDTADICYDRIKEIPCIT 339 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~ 339 (421)
.++...+.+.|+++|.+.
T Consensus 264 ~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 264 QENADAIAALLDGHAAVN 281 (405)
T ss_pred HHHHHHHHHHHHcCCCee
Confidence 999999999999887664
No 203
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=2.5e-23 Score=198.78 Aligned_cols=348 Identities=17% Similarity=0.174 Sum_probs=221.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++++.....+... ..+....+++.+....+ ....+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGse 112 (421)
T PRK06777 37 VEGREYIDFAAGIAVLNT-GHRHPKVVAAVRQQLDQFTHTAYQIV--PYASYVTLAERINALAP-IDGPAKTAFFTTGAE 112 (421)
T ss_pred CCCCEEEEcccCHHhhcc-CCCCHHHHHHHHHHHhhccccccccc--CChHHHHHHHHHHHhCC-CCCCceEEEeCCcHH
Confidence 358899999877543222 25688999999999987432222111 12333444455544322 112468999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCCCc----cCCHHHHHhhhc
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEKGW----EVDLDGLEALAD 180 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~d~e~l~~~~~ 180 (421)
|+..+++... ..| .+|+....+|++....+... +.. +..++.+ +... ..+++.+++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~l~~~~~ 191 (421)
T PRK06777 113 AVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYP-NELHGVSVEEALSSVERLFK 191 (421)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCC-ccccCcCHHHHHHHHHHHHH
Confidence 9999988653 223 57889999999986555432 210 0111111 1010 113556777663
Q ss_pred ----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 181 ----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 181 ----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
++..+.++..| ++..|. .+|++.+++|.++|++||+++|+||+|+++.+.|.. .....++...+++ ++||
T Consensus 192 ~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~sK 267 (421)
T PRK06777 192 ADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMAK 267 (421)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eeeh
Confidence 23344556666 677886 578899999999999999999999999998777753 2333343322333 7899
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.++ +|+|+||++++ +++++.+.... ..+.+.+++.+.++.++|+...+ ++..++.+++.+++.+.|+
T Consensus 268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~ 335 (421)
T PRK06777 268 SLG-GGMPISAVVGR--------AEVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLE 335 (421)
T ss_pred hhc-CCCceEEEEEc--------HHHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHH
Confidence 987 89999999985 35666665443 23557899999999999874322 3455566666666666665
Q ss_pred c----CCCccccCCCCceeEEEEecCcccccCCCChHHHHH---HHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH
Q 014631 334 E----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFAL---QLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE 404 (421)
Q Consensus 334 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~ 404 (421)
+ .|.+..+ .+.+.++ .+.+..... + ..+.++.. ..+.++||.+.|+..|+ +.+|++++ .++++++
T Consensus 336 ~l~~~~~~i~~v-rg~G~~~-~i~~~~~~~-~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i~ 409 (421)
T PRK06777 336 KAKASCPAIVDI-RARGSMV-AVEFNDPQT-G-KPSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQFS 409 (421)
T ss_pred HHHHhCCCeEEe-cCceEEE-EEEEecCcc-C-CccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHHH
Confidence 4 3444423 5665555 444532110 0 01222222 22466899999986654 68999996 7999999
Q ss_pred HHHHHHHHHHH
Q 014631 405 EGLGRIKAFCQ 415 (421)
Q Consensus 405 ~~~~~l~~~~~ 415 (421)
+++++|.+++.
T Consensus 410 ~~~~~l~~~l~ 420 (421)
T PRK06777 410 KALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHh
Confidence 99999998874
No 204
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=4.7e-23 Score=187.81 Aligned_cols=330 Identities=18% Similarity=0.208 Sum_probs=240.0
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLARPGANILLP 139 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~ 139 (421)
+.++.+++++.+..-. ...+. ...+-+.+.+.+...++ .+ .+-++++++||.+++.++..+++|||+|++.
T Consensus 15 ~v~~~V~~am~~~~~~----h~s~~--F~~~~~~~~~~L~~v~~--t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 15 PVPPRVLLAMARPMVG----HRSPD--FVGIMKEVLEKLRKVFG--TENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCHHHHHHhcCCCCC----CCCHH--HHHHHHHHHHHHHHHhc--CCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 5678888887664432 22221 23333333333333333 23 3556777889999999999999999999999
Q ss_pred CCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 140 KPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 140 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
..+.++ +..+++..|++++.+...+. -.++++++++.+++ +.+.+.+++.-.+||+. .++++|+++|++||
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~wg--~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvl---npl~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVEWG--EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVL---NPLKEIAKAAKEHG 161 (383)
T ss_pred eCChHHHHHHHHHHHhCCceEEEeCCCC--CCCCHHHHHHHHhcCCCccEEEEEeccCccccc---CcHHHHHHHHHHcC
Confidence 888876 47889999999999886543 45899999999974 46778888888899999 67999999999999
Q ss_pred cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCC-----------cchhHHHHHHH
Q 014631 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPS-----------GILQELRIVDS 283 (421)
Q Consensus 216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~-----------~~~~~~~~~~~ 283 (421)
.++|+|.+-+. |.....+..++.+ +++++..|.++. || +|.+..++.. ..++-..+.+.
T Consensus 162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~ 232 (383)
T COG0075 162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKY 232 (383)
T ss_pred CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHH
Confidence 99999999886 3334455555554 778889999875 45 6777775421 12211222333
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-e-eEEEEecCcccccC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-S-MFVMVKLNLSLLEG 361 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-~-~~~~~~~~~~~~~~ 361 (421)
++....+.++++....+++.++|+...+++++.+.++++++.+.+++.++.+ |+..+..+.. + ....+..|..
T Consensus 233 ~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g---- 307 (383)
T COG0075 233 MEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG---- 307 (383)
T ss_pred HhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC----
Confidence 3332334468888899999999988778889999999999999999999998 8884432211 1 2233334432
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.++.+....+++++|+.+.+|........+||+.. .+.+++..++.+|..++.++.
T Consensus 308 -~~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 308 -VDDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred -CCcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 13444555778888999999888777899999975 788999999999999998864
No 205
>PRK06460 hypothetical protein; Provisional
Probab=99.93 E-value=3.1e-23 Score=195.23 Aligned_cols=221 Identities=14% Similarity=0.126 Sum_probs=156.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc----chHHHHhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP----LYEANARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~~ 160 (421)
.....+|++++|++.+ . ...+++ ++|++++..++.+++++||+|+++.+.|. .+...++..|.++..+
T Consensus 44 ~p~~~~L~~~lA~l~g------~-~~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 44 NPTVLELTKKIVELEN------A-EMGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred CccHHHHHHHHHHHhC------C-CcEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 4557899999999983 3 234555 55578999999999999999999987664 3446677889888777
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+.+ +.+.+++.++++++++++++|+||||.+++. ++|.++|+++|+++|+|++|.... ...++
T Consensus 116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~---~~I~~la~~~g~~vivDea~~~~~----~~~~l--- 178 (376)
T PRK06460 116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVDI---TELSKVCKENGSILIVDATFSTPI----NQKPL--- 178 (376)
T ss_pred CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccCH---HHHHHHHHHcCCEEEEECCcCccc----cCChh---
Confidence 642 2234555556788999999999999999774 567888999999999999997532 11111
Q ss_pred CCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
. .+..+++.|+||+|+.. +.++||++++ +++++.+....... .+.++. .+..+++ ...+++.+.
T Consensus 179 ~-~~~divv~S~sK~l~G~~~~~~G~~~~~--------~~l~~~l~~~~~~~g~~~~~~---~a~~~l~--~~~~l~~r~ 244 (376)
T PRK06460 179 E-LGADIVVHSASKFLAGHNDVIAGLAAGY--------GKLLNVIDQMRRTLGTSLDPH---AAYLTLR--GIKTLKIRM 244 (376)
T ss_pred h-cCCCEEEeecceeccCCCCceEEEEecC--------HHHHHHHHHHHHhcCCCCCHH---HHHHHHh--chhhHHHHH
Confidence 1 12348899999997533 3679999874 35667776554332 233332 2223333 246678888
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
++..++++.+.+.|+++|.+..+..|
T Consensus 245 ~~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 245 DVINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECC
Confidence 89999999999999988776534343
No 206
>PLN02624 ornithine-delta-aminotransferase
Probab=99.93 E-value=6.1e-23 Score=198.56 Aligned_cols=344 Identities=14% Similarity=0.122 Sum_probs=216.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++||..|.-.... ...+|.+.+++.+++++..... +.......++.+.+++++ + .+.++++++|+
T Consensus 72 ~dG~~ylD~~sg~~~~~~-Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGs 142 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVNQ-GHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGA 142 (474)
T ss_pred CCCCEEEEcccchhcccC-CCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChH
Confidence 347889999887544322 2568999999999998732211 111222345666666653 2 36899999999
Q ss_pred HHHHHHHHHhcC--------C-CC-eEEEcCCCCcchHHHHhhcCceeE-e---eeccCC---CCccCCHHHHHhhhc--
Q 014631 120 QAIQVILTVLAR--------P-GA-NILLPKPGFPLYEANARHTRLEIR-H---FDLLPE---KGWEVDLDGLEALAD-- 180 (421)
Q Consensus 120 ~al~~~~~~l~~--------~-gd-~Vl~~~p~y~~~~~~~~~~g~~~~-~---~~~~~~---~~~~~d~e~l~~~~~-- 180 (421)
+|+..+++.... + ++ .|+....+|++....+........ . -|..+. -.+ -|++.+++.+.
T Consensus 143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~ 221 (474)
T PLN02624 143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF-GDLDALEKIFEED 221 (474)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC-CCHHHHHHHHHhC
Confidence 999999875432 1 33 577788889987544433221110 0 000000 001 16788888774
Q ss_pred -cCceEEEEeCCCCCcccccCHH-HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC
Q 014631 181 -ENTVAMVIVNPGNPCGNVFTYQ-QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 181 -~~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 258 (421)
+++.++++..++|++|.+++++ .+++|.++|++||+++|+||+|.++.+.|... .....+....++ ++||.++.
T Consensus 222 ~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~-a~~~~~i~pDiv---~lsK~lgg 297 (474)
T PLN02624 222 GDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKML-ACDWEEVRPDVV---ILGKALGG 297 (474)
T ss_pred CCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchh-hHHhcCCCCCEE---EecccccC
Confidence 3455666667799999988776 49999999999999999999999877666532 211122222233 47899987
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc---
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE--- 334 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 334 (421)
+++++|+++++ .++++.+..... .+.+.+++.+.++.++|+...+.. ..++..++.+.+.+.|++
T Consensus 298 G~~pigav~~~--------~~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~ 366 (474)
T PLN02624 298 GVIPVSAVLAD--------KDVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQK 366 (474)
T ss_pred CCCcceeeeec--------HHHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHH
Confidence 77999999985 246665544332 344678888998888886532222 222333444444444433
Q ss_pred -CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 335 -IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 335 -~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
++. +..+ .+. |.+..+.++.... +.....+++.. +.++||.+.|+. .+.+|++++ +++++|++++++|
T Consensus 367 ~~~~~i~~v-rg~-G~~~~i~l~~~~~-~~~~a~~~~~~-L~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L 438 (474)
T PLN02624 367 QFPKLIKEV-RGR-GLLNAVVLNSPKL-GPVSAYDVCLK-LKERGLLAKPTH----DTIIRLAPPLSISEDELQECSKAL 438 (474)
T ss_pred hCCCceEEE-Eee-EEEEEEEecCCCc-ChHHHHHHHHH-HHhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHH
Confidence 332 2212 233 4455556643210 00123456665 477899998863 478999975 8999999999999
Q ss_pred HHHHHHh
Q 014631 411 KAFCQRH 417 (421)
Q Consensus 411 ~~~~~~~ 417 (421)
++++++.
T Consensus 439 ~~~l~~~ 445 (474)
T PLN02624 439 SDVLEHD 445 (474)
T ss_pred HHHHHHH
Confidence 9998764
No 207
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.93 E-value=2.7e-23 Score=195.70 Aligned_cols=227 Identities=15% Similarity=0.171 Sum_probs=164.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcC
Q 014631 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTR 154 (421)
Q Consensus 79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g 154 (421)
..+|+. ....+|++.++++.+ .+++++++|+++|+..++.+++++||+|+++.|+|.+....+. ..+
T Consensus 45 Y~R~~~-p~~~~le~~lA~l~g--------~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGN-PTRDLLQQALAELEG--------GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCC-chHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 345643 346899999999873 4679999999999999999999999999999999987554332 223
Q ss_pred ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc
Q 014631 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 234 (421)
.++..++ ..|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..+...
T Consensus 116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 4444432 13789999999888999999999999999976 678888899999999999999764321
Q ss_pred ccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchh
Q 014631 235 VRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKED 312 (421)
Q Consensus 235 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~ 312 (421)
.++ .++. .++++|+||.++. ++++.|++++.+ +++.+++...... ..+.+++.+..+...++
T Consensus 182 ~pl-~~ga---Divv~S~sK~l~G~~~~~~G~i~~~~-------~~~~~~l~~~~~~~g~~~sp~~a~l~lr~l~----- 245 (382)
T TIGR02080 182 NPL-ALGA---DLVLHSCTKYLNGHSDVIAGAVIAKD-------PQVAEELAWWANNLGVTGGAFDSYLTLRGLR----- 245 (382)
T ss_pred Cch-hhCC---CEEEeecceeccCCCCceeEEEEeCC-------HHHHHHHHHHHHccCCCCCHHHHHHHHcccc-----
Confidence 122 1222 2788999999864 678999988754 3466666554433 33556665555433332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
-+..+.++..++...+.+.|+++|.+..+..|
T Consensus 246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP 277 (382)
T TIGR02080 246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP 277 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 35555677778888999999988766533333
No 208
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=6e-23 Score=193.42 Aligned_cols=224 Identities=17% Similarity=0.209 Sum_probs=167.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcC
Q 014631 79 FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTR 154 (421)
Q Consensus 79 ~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g 154 (421)
+.+|+. .....|++++|++.+ .+.+++++|+++++..++.+++++||+|++++|+|.+....+. ..|
T Consensus 46 Y~R~~~-pt~~~L~~~lA~l~g--------~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~g 116 (386)
T PRK08045 46 YSRRGN-PTRDVVQRALAELEG--------GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGC 116 (386)
T ss_pred eeCCCC-ccHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCC
Confidence 334543 346899999999873 2469999999999999999999999999999999986443332 233
Q ss_pred ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc
Q 014631 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY 234 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 234 (421)
.++..++ ..|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..... .
T Consensus 117 i~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~----~ 182 (386)
T PRK08045 117 YRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL----Q 182 (386)
T ss_pred eEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----C
Confidence 4554442 15889999999889999999999999999976 67888889999999999999976432 1
Q ss_pred ccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchh
Q 014631 235 VRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKED 312 (421)
Q Consensus 235 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~ 312 (421)
.++ .+..+ +++.|++|.++. ++.+.|++++.+ +++.+.+.... ....+.+++.+..+...|+.
T Consensus 183 ~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~-------~~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t---- 247 (386)
T PRK08045 183 NPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT---- 247 (386)
T ss_pred Cch-hhCCC---EEEeecceeccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc----
Confidence 222 22222 789999999863 557789988753 24555554433 23346777888777777754
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
+..+.++..+++..+.+.|+++|.+..+
T Consensus 248 -l~~R~~~~~~na~~la~~L~~~p~v~~V 275 (386)
T PRK08045 248 -LVPRMELAQRNAQAIVKYLQTQPLVKKL 275 (386)
T ss_pred -HHHHHHHHHHHHHHHHHHHHcCCCEeEE
Confidence 6777888889999999999988876533
No 209
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=3.2e-23 Score=196.00 Aligned_cols=216 Identities=14% Similarity=0.167 Sum_probs=159.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~ 160 (421)
.+...++++.++++.+ .+..+++++|++|+..++.+++++||+|+++.|+|.+... .+...|+++..+
T Consensus 63 ~p~~~~le~~lA~l~g--------~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~v 134 (398)
T PRK08249 63 NPTVQAFEEKVRILEG--------AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLC 134 (398)
T ss_pred ChHHHHHHHHHHHHhC--------CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEc
Confidence 3446899999999973 2456777777899999999999999999999999987543 345678877665
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+. .|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+..... . ++ ..
T Consensus 135 d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~-~---~l-~~ 199 (398)
T PRK08249 135 ET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQ-N---PL-AL 199 (398)
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccC-C---ch-hh
Confidence 42 4899999999889999999999999999976 778889999999999999999864321 1 22 12
Q ss_pred CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+.+ +++.|+||.++.+|.++ |+++++ +++.+.+...... ..+.++..+..+...++ .+..+.
T Consensus 200 ~~D---ivv~S~sK~l~g~~~~~gG~vv~~--------~~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tL~~R~ 263 (398)
T PRK08249 200 GAD---LVIHSATKFLSGHADALGGVVCGS--------KELMEQVYHYREINGATMDPMSAYLILRGMK-----TLKLRV 263 (398)
T ss_pred CCC---EEeccCceecCCCCCceEEEEECC--------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-----hHHHHH
Confidence 222 77899999988777776 555542 3466666555432 33555555555444443 245666
Q ss_pred HHHHHHHHHHHHHhhcCCCcc
Q 014631 319 DILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~ 339 (421)
++..+++..+.+.|+++|.+.
T Consensus 264 ~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 264 RQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCee
Confidence 777888889999999877654
No 210
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=6.2e-23 Score=192.62 Aligned_cols=225 Identities=13% Similarity=0.152 Sum_probs=166.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCce
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLE 156 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~ 156 (421)
+|+ ......|++++|++.+ .+++++++|+++++..++.+++++||+|++++|.|.+....+ ...|.+
T Consensus 49 R~~-npt~~~Le~~lA~leg--------~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~ 119 (388)
T PRK08861 49 RSG-NPNRGLLEQTLSELES--------GKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFK 119 (388)
T ss_pred CCC-CchHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeE
Confidence 443 3346899999999973 579999999999999999999999999999999998654332 334666
Q ss_pred eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 236 (421)
+..++. .|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+. .+
T Consensus 120 v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~----~p 185 (388)
T PRK08861 120 VQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ----KP 185 (388)
T ss_pred EEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----CC
Confidence 666641 4889999998889999999999999999976 667888899999999999999864321 12
Q ss_pred ccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHH
Q 014631 237 MGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
+ .++.+ +++.|++|.++.+ +...|++++++ +++.+.+...... ....++.....+...|+. +
T Consensus 186 l-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~-------~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T-----l 249 (388)
T PRK08861 186 L-ELGAD---FVIHSTTKYINGHSDVIGGVLITKT-------KEHAEELAWWGNCIGATGTPFDSYMTLRGIRT-----L 249 (388)
T ss_pred c-ccCCC---EEEeecceeccCCCcceeEEEEecH-------HHHHHHHHHHHhccCCCCChHHHHHHHhcCCC-----H
Confidence 2 22333 8889999998764 46788888753 2455555544332 335566666655444543 5
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 315 SKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.-+.++..++...+.+.|+++|.+.-+..|
T Consensus 250 ~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP 279 (388)
T PRK08861 250 GARMRVHEESAQQILAYLQTQSLVGTIYHP 279 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 666777788888999999988776534344
No 211
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.93 E-value=3.5e-23 Score=195.11 Aligned_cols=223 Identities=16% Similarity=0.136 Sum_probs=166.2
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEe
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRH 159 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~ 159 (421)
..+...+|++.++++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+... .+...|.++..
T Consensus 38 ~~p~~~~le~~la~l~g--------~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~ 109 (369)
T cd00614 38 GNPTVDALEKKLAALEG--------GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTF 109 (369)
T ss_pred CChhHHHHHHHHHHHHC--------CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEE
Confidence 34456899999999873 2467778888999999999999999999999999988653 34467888777
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
++.+ |++++++.+++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++|+...+ ..++ .
T Consensus 110 v~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~----~~~~-~ 174 (369)
T cd00614 110 VDPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYL----QRPL-E 174 (369)
T ss_pred eCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhc----CChh-h
Confidence 7542 588999999888999999999999999955 88999999999999999999976432 1111 1
Q ss_pred cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
++ ..+++.|+||.++.+| .+.|++++++ +++.+.+..... ...+.++..+.++...++ .+..+
T Consensus 175 ~g---~Divv~S~tK~l~g~~~~~gG~v~~~~-------~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-----tl~~r 239 (369)
T cd00614 175 LG---ADIVVHSATKYIGGHSDVIAGVVVGSG-------EALIQRLRFLRLALGTILSPFDAWLLLRGLK-----TLPLR 239 (369)
T ss_pred hC---CcEEEeccceeccCCCCceEEEEEeCc-------HHHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-----CHHHH
Confidence 22 2388999999988766 7889999853 245566654432 233455665555544443 24556
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.++..++...+.+.|+++|++..+..|
T Consensus 240 ~~~~~~na~~la~~L~~~~~v~~V~~p 266 (369)
T cd00614 240 MERHSENALKVAEFLEKHPKVERVYYP 266 (369)
T ss_pred HHHHHHHHHHHHHHHHcCCCccEEECC
Confidence 777888999999999988776534344
No 212
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.93 E-value=7.4e-23 Score=195.63 Aligned_cols=334 Identities=15% Similarity=0.155 Sum_probs=216.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
.|.+++||..|..... ....+|.+.+++.+++++... ........+.++.+.+++++ | .+.++++++|++
T Consensus 35 ~g~~~lD~~s~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs~ 105 (401)
T TIGR01885 35 EGKRYLDFLSAYSAVN-QGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGAE 105 (401)
T ss_pred CCCEEEEcccCHhhcc-CCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccHH
Confidence 4788999988753322 124689999999999876321 11101222356666666654 2 358999999999
Q ss_pred HHHHHHHHhcC---------C-CCeEEEcCCCCcch-HHHHhhcCc------------eeEeeeccCCCCccCCHHHHHh
Q 014631 121 AIQVILTVLAR---------P-GANILLPKPGFPLY-EANARHTRL------------EIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 121 al~~~~~~l~~---------~-gd~Vl~~~p~y~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
|+..+++.+.. . .+.|+....+|++. .......+. ++..++. .|++++++
T Consensus 106 A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~ 178 (401)
T TIGR01885 106 AVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALEE 178 (401)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHHH
Confidence 99999987521 2 36788888888865 333332221 1122221 16788888
Q ss_pred hhc---cCceEEEEeCCCCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631 178 LAD---ENTVAMVIVNPGNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS 253 (421)
Q Consensus 178 ~~~---~~~~~i~~~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 253 (421)
.++ ++..++++..+++++|...++ +.+++|.++|++||+++|+||+|.++.+.|... .....+...+++ ++|
T Consensus 179 ~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~g 254 (401)
T TIGR01885 179 ALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LLG 254 (401)
T ss_pred HHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Eee
Confidence 774 344555555568999998864 469999999999999999999998877666532 221122222233 467
Q ss_pred cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh
Q 014631 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l 332 (421)
|.++.+++|+|+++++ +++++.+.... ..+.+.+++.+.++.++|+...+. ...++.+++.+++.+.|
T Consensus 255 K~l~~g~~~ig~v~~~--------~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~L 323 (401)
T TIGR01885 255 KALSGGVYPVSAVLAD--------DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQL 323 (401)
T ss_pred ccccCCCCCcEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHH
Confidence 9987766999999985 35666665422 234466788888888888753322 34456677788888888
Q ss_pred hcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631 333 KEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 333 ~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
++++ .+.....+. |.+..+.++.... .....++..++ .++||.+.|+. .+.+|++++ .+++++++++++
T Consensus 324 ~~l~~~~~~~~~g~-g~~~~i~~~~~~~--~~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l~~ 395 (401)
T TIGR01885 324 KKLPKPIITEVRGR-GLLNAIVIDESKT--GRTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGLEI 395 (401)
T ss_pred HhccCCceeEEeec-CeeEEEEeccCcc--hhHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHHHH
Confidence 8762 221011233 4455455543210 01245666665 57799998753 478999987 899999999999
Q ss_pred HHHHH
Q 014631 410 IKAFC 414 (421)
Q Consensus 410 l~~~~ 414 (421)
|++++
T Consensus 396 l~~~l 400 (401)
T TIGR01885 396 IKKVI 400 (401)
T ss_pred HHHHh
Confidence 99876
No 213
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=3.4e-22 Score=191.51 Aligned_cols=350 Identities=16% Similarity=0.137 Sum_probs=215.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... ...+|.+.+++.+++.+.. .+.......+.+..+|+.+.+..+ ...+.++|+++|++
T Consensus 38 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~--~~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGsE 112 (443)
T PRK08360 38 IEGNEYIDFLSDAAVQNV-GHNNPRVVKAIKEQTDKLI--HYTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLSGSD 112 (443)
T ss_pred CCCCEEEEccccHhhccc-CCCCHHHHHHHHHHHHhcc--CccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCCHHH
Confidence 458899999888544322 3578999999999998732 121111123444555555554332 22368999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhh-cCc------------eeEeeeccCCC--Ccc--------CCHHHH
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARH-TRL------------EIRHFDLLPEK--GWE--------VDLDGL 175 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~d~e~l 175 (421)
|+..+++... ..| .+|+....+|++....+.. .|. .+..++.+... .+. -+++.+
T Consensus 113 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (443)
T PRK08360 113 ANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYI 192 (443)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHH
Confidence 9999998653 123 5788888899887433322 121 11222221100 000 123445
Q ss_pred Hhhhc-----cCceEEEEeCC-CCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 176 EALAD-----ENTVAMVIVNP-GNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 176 ~~~~~-----~~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
++.+. +++.++ +..| +||+|.+++ ++.++++.++|++||+++|+||+|+++.+.|..+ ....++..++++
T Consensus 193 ~~~l~~~~~~~~iAAv-i~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDii- 269 (443)
T PRK08360 193 KEKFEGEVYAEGVAAL-FAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDII- 269 (443)
T ss_pred HHHHHhccCCCCeEEE-EECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCEE-
Confidence 55553 234444 5556 799999877 5579999999999999999999999987777532 222223223333
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
++||.++ +|+|+||++++ +++++.+.... ..+.+.+++.+.++.++|+...+. +..++.+++.++
T Consensus 270 --tlsK~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~ 335 (443)
T PRK08360 270 --TLGKPLG-GGLPISATIGR--------AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLGNY 335 (443)
T ss_pred --Eeccccc-CCceeEEEEEc--------HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHH
Confidence 6799986 89999999985 35777665443 234567888888888888753322 223344444444
Q ss_pred HHHHhh----cCCCccccCCCCceeEEEEecCcccccCCC---ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631 328 CYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGIS---DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I 398 (421)
Q Consensus 328 ~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~ 398 (421)
+.+.|+ +.|.+..+ .+ -|.++.+++......... ....+... +.++|+.+.+.. .+.+|++++ .
T Consensus 336 l~~~L~~l~~~~~~v~~v-rg-~Gl~~gie~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~~~~~----~~~lr~~P~l~~ 408 (443)
T PRK08360 336 TKKRLEEMKKKHELIGDV-RG-IGLMIGVDLVKDRETKERAYEEAAKVVWR-AWELGLIVTFFS----GNVLRIQPPLTI 408 (443)
T ss_pred HHHHHHHHHHhCCCeeee-ec-cceEEEEEEecCCcccCccHHHHHHHHHH-HHHCCeEEeecC----CCEEEEeCCCCC
Confidence 444443 34333312 23 355666666421100000 12244444 567899986532 478999776 8
Q ss_pred CHHHHHHHHHHHHHHHHHhhh
Q 014631 399 EPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+++++++++++|.++++++.+
T Consensus 409 t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 409 EKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999987654
No 214
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.93 E-value=4.8e-23 Score=195.19 Aligned_cols=226 Identities=16% Similarity=0.159 Sum_probs=166.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCc
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRL 155 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~ 155 (421)
.+|+. ....+|++.+|++.+ .++.+++++|+.|+..++.+++++||+|+++...|.+. ...+...|+
T Consensus 65 ~r~~~-p~~~~le~~lA~l~g--------~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~ 135 (403)
T PRK07810 65 SRYGN-PTVSMFEERLRLIEG--------AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGV 135 (403)
T ss_pred eCCCC-chHHHHHHHHHHHhC--------CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCc
Confidence 34443 346899999999973 34788888889999999988899999999998666443 445667899
Q ss_pred eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
+++.++. .|++++++++++++++|++.+|+||+|.+. ++++|+++|+++|+++|+|++|+......
T Consensus 136 ~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~---dl~~I~~la~~~g~~vivD~a~a~~~~~~---- 201 (403)
T PRK07810 136 ETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLV---DIAAVSELAHAAGAKVVLDNVFATPLLQR---- 201 (403)
T ss_pred EEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCCccccCC----
Confidence 9888763 288999999988999999999999999995 58899999999999999999998643211
Q ss_pred cccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhH
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
++ ..+. .+++.|++|.+++.|.++ |++++++ . .+.+.+... .......++..++.+...|+.
T Consensus 202 ~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~-~------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t----- 265 (403)
T PRK07810 202 GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDR-E------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET----- 265 (403)
T ss_pred hh-hcCC---cEEEccCCceecCCcCceeEEEEeCh-H------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc-----
Confidence 22 2222 378899999998888887 7776643 1 122223322 122335667777766665653
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+..+.++.+++...+.+.|+++|.+..+..|
T Consensus 266 l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6677777788888888999988877644433
No 215
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=1.5e-22 Score=189.75 Aligned_cols=244 Identities=15% Similarity=0.140 Sum_probs=172.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
++.++.+.++...... ....|.. ..+...||+++|++.+ .+++++++|+++|++.++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~--~~~~Y~r~~npt~~~Le~~iA~le~--------~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN--GEMFYGRRGTPTHFAFQAAIVELEG--------GAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc--CCceecCCCCchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 3445555554432211 1134554 2345799999999862 24789999999999999999999999999
Q ss_pred EcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 138 LPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 138 ~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
+++|.|.++...+ ...|.++..++. .+.+.+++.+++++++|++.+|+||||.+ .++++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v---~dl~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEV---QDVPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHH
Confidence 9999998876533 456777766542 14578888888899999999999999988 889999999999
Q ss_pred cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cc
Q 014631 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-IS 291 (421)
Q Consensus 214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 291 (421)
+|+++++|++|+... ...++ .++. .+++.|.+|+++.+ +.-.|+++.+ +++.+.+..... ..
T Consensus 175 ~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~--------~~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATAN--------EKHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECC--------HHHHHHHHHHHHhcC
Confidence 999999999998632 12222 2333 38899999998665 4556765542 234444443322 23
Q ss_pred cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.+.++.....+...|+. +.-+.++..++...+.+.|+++|.+.-+.+|
T Consensus 239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP 286 (394)
T PRK09028 239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP 286 (394)
T ss_pred CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 35666666655444443 6677788889999999999998876544444
No 216
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=7.6e-23 Score=193.38 Aligned_cols=223 Identities=18% Similarity=0.178 Sum_probs=159.3
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEe
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRH 159 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~ 159 (421)
+.....+|+++++++.+. ... +++++|++|+..++.+++++||+|+++.|.|.+....+. ..|+++..
T Consensus 59 ~~p~~~~Le~~lA~~~g~-------~~~-i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~ 130 (388)
T PRK07811 59 GNPTRTALEEQLAALEGG-------AYG-RAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTP 130 (388)
T ss_pred CCccHHHHHHHHHHHhCC-------Cce-EEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEE
Confidence 445678999999999842 223 444567899999999999999999999999986543332 34666666
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
++. .|++++++.+++++++|++++|+||||.. .++++|.++|+++|+++|+|++|+..... .++.
T Consensus 131 ~d~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~---~dl~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~- 195 (388)
T PRK07811 131 VDL-------SDLDAVRAAITPRTKLIWVETPTNPLLSI---TDIAALAELAHDAGAKVVVDNTFASPYLQ----QPLA- 195 (388)
T ss_pred eCC-------CCHHHHHHhcCcCCeEEEEECCCCCccee---cCHHHHHHHHHHcCCEEEEECCCCccccC----Cchh-
Confidence 543 38899999998899999999999999988 67999999999999999999999864321 1221
Q ss_pred cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
.+. .+++.|++|.++.+| .+.||+++++ +++.+.+...... ....++.....+...|+ .+..+
T Consensus 196 ~ga---Divv~S~sK~l~g~~~~~gG~vv~~~-------~~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-----tl~~R 260 (388)
T PRK07811 196 LGA---DVVVHSTTKYIGGHSDVVGGALVTND-------EELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-----TLAVR 260 (388)
T ss_pred hCC---cEEEecCceeecCCCCcEEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccC-----cHHHH
Confidence 222 288999999988754 5679988764 2355555443332 22334444333333333 25566
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.++.+++...+.+.|+++|++..+..|
T Consensus 261 ~~~~~~na~~la~~L~~~p~v~~V~yP 287 (388)
T PRK07811 261 MDRHSENAEAVAEFLAGHPEVSTVLYP 287 (388)
T ss_pred HHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 677788899999999988876533333
No 217
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.93 E-value=9.1e-23 Score=192.86 Aligned_cols=219 Identities=15% Similarity=0.174 Sum_probs=158.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~~~~~~~~ 162 (421)
...+|++.+|++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+. ...+...|+++..++.
T Consensus 60 ~~~~le~~lA~l~g--------~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~ 131 (391)
T TIGR01328 60 TVSNLEGRIAFLEG--------TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINM 131 (391)
T ss_pred hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECC
Confidence 46789999999984 23467888888999999999999999999999988754 3344567888877764
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
+ |++++++.+++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|+.... +. ++ ....
T Consensus 132 ~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~-~~---~~-~~g~ 196 (391)
T TIGR01328 132 A-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPML-TN---PV-ALGV 196 (391)
T ss_pred C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhcc-CC---ch-hcCC
Confidence 2 788999999889999999999999999965 78888999999999999999986432 11 22 1222
Q ss_pred CCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhc--cc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYL--NI-SSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
.+++.|+||.++++|.++ |+++++ +++++.+.... .. ....++.....+...|+ .+..+.
T Consensus 197 ---Divv~S~sK~lgg~g~~~gG~v~~~--------~~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~-----tl~~r~ 260 (391)
T TIGR01328 197 ---DVVVHSATKYIGGHGDVVAGLICGK--------AELLQQIRMVGIKDMTGSVISPFDAWLILRGLK-----TLNIRM 260 (391)
T ss_pred ---CEEEccccccccCCCCceEEEEEcC--------HHHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC-----cHHHHH
Confidence 277899999999888775 555543 34556555332 11 22444444444443343 245567
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
++.+++...+.+.|+++|++..+..|
T Consensus 261 ~~~~~na~~la~~L~~~p~v~~v~yp 286 (391)
T TIGR01328 261 KRHSENAMKVAEYLKSHPAVEKVYYP 286 (391)
T ss_pred HHHHHHHHHHHHHHHhCCCccEEECC
Confidence 77788889999999988776533333
No 218
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.93 E-value=2.4e-22 Score=193.36 Aligned_cols=352 Identities=18% Similarity=0.135 Sum_probs=217.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... ...+|.+.+++.+++++.. .+.......+.+..+++.+.+..+. ...+.++++++|++
T Consensus 53 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGse 128 (443)
T PRK06058 53 VDGNRLIDLGSGIAVTSV-GNSAPRVVEAVREQVARFT--HTCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGAE 128 (443)
T ss_pred CCCCEEEEcCcchhhhcc-CCCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcHH
Confidence 348889999877533222 2578999999999998632 2222222345666666666554431 11258999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC-CC---ccC--------CH
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE-KG---WEV--------DL 172 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~-~~---~~~--------d~ 172 (421)
|+..+++... ...++|+...++|+++...+...+. .+..++.... +. ... .+
T Consensus 129 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (443)
T PRK06058 129 AVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAI 208 (443)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHH
Confidence 9999988532 1237899999999998655443211 1111221100 00 000 12
Q ss_pred HHHHhhhccCceEEEEeCCCCCc-ccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 173 DGLEALADENTVAMVIVNPGNPC-GNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 173 e~l~~~~~~~~~~i~~~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
+.+++.+..+..+.++..|.++. |.. .+++.+++|.++|++||+++|.||+++++.+.|..+ ....++...+++
T Consensus 209 ~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv--- 284 (443)
T PRK06058 209 TVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI--- 284 (443)
T ss_pred HHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE---
Confidence 33344443344455677885544 554 467889999999999999999999999987777543 222333332333
Q ss_pred ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631 251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY 329 (421)
Q Consensus 251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (421)
+++|.++ +|+++|+++++ +++++.+.... ..+.+.++++++++.++|+...+. +..++.+++.+++.
T Consensus 285 ~~gK~l~-~G~Pi~av~~~--------~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~ 352 (443)
T PRK06058 285 TTAKGIA-GGLPLSAVTGR--------AEIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALMT 352 (443)
T ss_pred EEccccc-CCCccEEEEEc--------HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHH
Confidence 5689976 78999999985 35666665443 245688999999999998753322 23444455555555
Q ss_pred HHhhc----CCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631 330 DRIKE----IPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS 401 (421)
Q Consensus 330 ~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e 401 (421)
+.|++ .+.+..+ .+. |.++.+.+..... +.......+... +.++||.+.++..+ .+.+|+.++ .+++
T Consensus 353 ~~L~~l~~~~~~i~~v-rg~-G~~~~i~~~~~~~~~~~~~~~~~l~~~-~~~~Gv~~~~~~~~--~~~lr~~Ppl~~t~~ 427 (443)
T PRK06058 353 DRLRALAAEDDRIGDV-RGR-GAMIAIELVKPGTTEPDAELTKALAAA-AHAAGVIVLTCGTY--GNVIRLLPPLVIGDE 427 (443)
T ss_pred HHHHHHHhhCCcEEee-ecc-ceEEEEEEecCCCCCCcHHHHHHHHHH-HHHCCeEEeccCCC--CCEEEEECCCccCHH
Confidence 55554 3323212 344 4455555632110 000001233333 45789999886544 368999876 8999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014631 402 ALEEGLGRIKAFCQRH 417 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~ 417 (421)
++++++++|.++++++
T Consensus 428 ~i~~~~~~l~~~l~~~ 443 (443)
T PRK06058 428 LLREGLDVLEAALADL 443 (443)
T ss_pred HHHHHHHHHHHHHHhC
Confidence 9999999999998753
No 219
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.93 E-value=3.5e-23 Score=198.49 Aligned_cols=345 Identities=16% Similarity=0.108 Sum_probs=216.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++||..|.+..+.+ ..+|.+.+++.+++++.. ..|.+..+..+|.+.+++++ + ..+.++++++|++
T Consensus 47 ~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~----~---~~~~v~~~~sGse 117 (426)
T PRK00062 47 VDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV----P---SIEMVRMVNSGTE 117 (426)
T ss_pred CCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC----C---CCCEEEEecCHHH
Confidence 3588999999887654433 478999999999998743 23334444445555555553 1 3568999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhc-Cce----------eEeeeccCCCCc---cCCHHHHHhhhcc---
Q 014631 121 AIQVILTVLAR--PGANILLPKPGFPLYEANARHT-RLE----------IRHFDLLPEKGW---EVDLDGLEALADE--- 181 (421)
Q Consensus 121 al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~~----------~~~~~~~~~~~~---~~d~e~l~~~~~~--- 181 (421)
|+..+++.... .+++|+..+++|+++...+... |.. ....+..+ +.. .-|++++++.+..
T Consensus 118 A~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~l~~~i~~~~~ 196 (426)
T PRK00062 118 ATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAK-HTLTAPYNDLEAVEELFEEYGD 196 (426)
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCccccc-ceEEcCCCCHHHHHHHHHhCCC
Confidence 99999987543 2578999999999986433221 100 00000000 000 0267888877642
Q ss_pred CceEEEEeCC-CCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 182 NTVAMVIVNP-GNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 182 ~~~~i~~~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
++.++ ++.| ...+|...+ .+.+++|.++|++||+++|+||+|+++. .|... ....++.... +.++||.++ .
T Consensus 197 ~~aai-ivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r-~g~~~-~~~~~~~~pD---i~~~gK~l~-~ 269 (426)
T PRK00062 197 EIAAV-IVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFR-VALGG-AQGYYGVTPD---LTTLGKIIG-G 269 (426)
T ss_pred cEEEE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccc-cCCcc-HHHHhCCCcc---hHhhhhHhh-C
Confidence 34444 5554 555887765 7889999999999999999999999874 33321 1112222111 358999986 7
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhh---cc-cccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhc
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGY---LN-ISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|+++++ +++++.+... .. .+.+.+++.++++.++|+...+ +..++.++.....++.+.+.+.+
T Consensus 270 G~p~ga~~~~--------~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 341 (426)
T PRK00062 270 GLPVGAFGGR--------REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKK 341 (426)
T ss_pred CCcceeeeEH--------HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999885 4677777432 12 2347888999998888875332 33444444444444445444444
Q ss_pred CCCccccCCCCceeEEEEecCcccccC-----CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG 406 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~ 406 (421)
+ ++.....+. |.++.+.+....... ..+ ...+... +.++||.+.|.. .+.+++++..++++++++
T Consensus 342 ~-~~~~~vrg~-G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~-l~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~ 414 (426)
T PRK00062 342 A-GIPLTVNRV-GSMFGLFFTDEPVTNYADAKKSDTERFARFFHA-MLDEGVYLAPSQ----FEAGFVSAAHTDEDIEKT 414 (426)
T ss_pred c-CCceEEEEe-cceEEEEEecCCCcchhhhccccHHHHHHHHHH-HHHCCeEeecCC----cCceeeeccCCHHHHHHH
Confidence 5 332111233 445555554211000 001 1344444 467899998742 245678877999999999
Q ss_pred HHHHHHHHHHh
Q 014631 407 LGRIKAFCQRH 417 (421)
Q Consensus 407 ~~~l~~~~~~~ 417 (421)
++.|.++++++
T Consensus 415 ~~~l~~~l~~~ 425 (426)
T PRK00062 415 LEAARKAFAAL 425 (426)
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 220
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.93 E-value=9.9e-23 Score=193.39 Aligned_cols=215 Identities=19% Similarity=0.193 Sum_probs=157.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~ 161 (421)
....++++.++++.+ . +..+++++|++|+..++..++++||+|+++.|.|.... ..+...|+++..++
T Consensus 65 p~~~~le~~lA~l~g------~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd 136 (403)
T PRK07503 65 PTLALLEQRMASLEG------G--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVD 136 (403)
T ss_pred chHHHHHHHHHHHhC------C--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeC
Confidence 346899999999873 2 23566778889999999988999999999999997543 33456788888776
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
.+ |++++++.+++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.... + .++ .++
T Consensus 137 ~~-------d~~~l~~~i~~~tklV~le~p~NPtG~~~---di~~I~~la~~~gi~lIvD~a~a~~~~-~---~~l-~~g 201 (403)
T PRK07503 137 LT-------DPAALKAAISDKTRMVYFETPANPNMRLV---DIAAVAEIAHGAGAKVVVDNTYCTPYL-Q---RPL-ELG 201 (403)
T ss_pred CC-------CHHHHHHhcCccCcEEEEeCCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCccccc-C---Cch-hhC
Confidence 42 78999999988999999999999999995 488899999999999999999986432 1 122 122
Q ss_pred CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--cc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--LN-ISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
. .+++.|+||.++.+| .+.|+++.+ +++.++++.. .. .....+++.+..+...|+ .+..+
T Consensus 202 ~---Di~v~S~tK~l~g~gd~~gG~v~~~--------~~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L~-----tl~~r 265 (403)
T PRK07503 202 A---DLVVHSATKYLGGHGDITAGLVVGG--------KALADRIRLEGLKDMTGAVMSPFDAFLLMRGLK-----TLALR 265 (403)
T ss_pred C---CEEEccccccccCCCceeEEEEEcC--------HHHHHHHHhhhHHhCcCCCCCHHHHHHHHcCcc-----hHHHH
Confidence 2 388899999998765 678888753 3466665532 22 223455555554444343 34555
Q ss_pred HHHHHHHHHHHHHHhhcCCCcc
Q 014631 318 VDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
.++..++...+.+.|+++|.+.
T Consensus 266 ~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 266 MDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred HHHHHHHHHHHHHHHHhCCCcc
Confidence 5666688888888888887665
No 221
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.93 E-value=3e-22 Score=186.18 Aligned_cols=350 Identities=17% Similarity=0.151 Sum_probs=225.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|+.++||..|....+. ...+|.+.+|+.+++..-. ...|... +....+++.|.+..+.. ....++++++|
T Consensus 53 vdG~~ylDf~sgi~v~~~-GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~-~~~~~~f~~sG 126 (447)
T COG0160 53 VDGNEYLDFLSGIAVLNL-GHNHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS-GLKKVFFGNSG 126 (447)
T ss_pred CCCCEEEEcccCcchhcc-CCCCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc-cCCeEEecCCc
Confidence 458999999997544333 3689999999999988743 2223222 34444444444322211 35679999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccCC--CCccC--------CH
Q 014631 119 KQAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLPE--KGWEV--------DL 172 (421)
Q Consensus 119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~~--~~~~~--------d~ 172 (421)
++|++.+++... .....|+....+|++....+... | ..+..+|.+.. +.+.. ..
T Consensus 127 aeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~ 206 (447)
T COG0160 127 AEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDAL 206 (447)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHH
Confidence 999999998653 23468999999998765444321 1 11333443211 11111 23
Q ss_pred HHHHhhhc-----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631 173 DGLEALAD-----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245 (421)
Q Consensus 173 e~l~~~~~-----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 245 (421)
+.++..+. +...+.++..| +...|.+ .|.+.++++.++|++||+++|+||+|.++.++|+ .+.+...+...+
T Consensus 207 ~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~-~fa~E~~gv~PD 285 (447)
T COG0160 207 EYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGK-MFAFEHFGVEPD 285 (447)
T ss_pred HHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-chhhhhcCCCCC
Confidence 33444231 23345566666 7778866 5667899999999999999999999999999994 556666554444
Q ss_pred EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (421)
++ +++|.++. |+++|.++++ +++.+........++..|+++++++.+.|+...++ .+.++..+.-
T Consensus 286 iv---t~aK~ig~-G~Pl~avv~r--------~ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G 350 (447)
T COG0160 286 IV---TLAKSLGG-GLPLSAVVGR--------AEIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELG 350 (447)
T ss_pred EE---EecccccC-CCceeEEecc--------HHhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHH
Confidence 44 68899655 9999999985 45666333333456789999999999999853333 3333344444
Q ss_pred HHHHHHhh----cCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631 326 DICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA- 397 (421)
Q Consensus 326 ~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~- 397 (421)
+++++.|. +.|-+..+ -.-|.+..+++..... +.......++. .+.++|+.+..+..+ .+.+||.+.
T Consensus 351 ~~l~~~L~~l~~~~~~IgdV--RG~Glm~giE~v~d~~t~~p~~~~~~~i~~-~~~~~Glil~~~G~~--~nviRi~PPL 425 (447)
T COG0160 351 EYLRDRLEELQEKHPLIGDV--RGLGLMIGVELVKDRDTKEPDAELAAKIVA-RAFERGLLLLTCGPH--GNVLRILPPL 425 (447)
T ss_pred HHHHHHHHHHHhhcCceecc--cccceEEEEEEecCCCCCCCCHHHHHHHHH-HHHHcCCEEeccCCC--CcEEEEeCCc
Confidence 44444443 44544422 2236788888764321 11111234444 457789988765432 488999987
Q ss_pred -CCHHHHHHHHHHHHHHHHHh
Q 014631 398 -IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++|+++++++.|.+++++.
T Consensus 426 ~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 426 TISDEELDEGLDILEEALKEA 446 (447)
T ss_pred ccCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999998764
No 222
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=1.3e-22 Score=191.21 Aligned_cols=216 Identities=15% Similarity=0.156 Sum_probs=156.9
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFD 161 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~ 161 (421)
.+...+|++.+|++++ .+++++++||++|+..++.+++++||+|+++.+.|.++...+ ...|+++..+.
T Consensus 52 np~~~~lE~~lA~l~g--------~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v~~~~ 123 (385)
T PRK08574 52 NPTLRPLEEALAKLEG--------GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKVVLAY 123 (385)
T ss_pred CccHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEEEEEC
Confidence 3457899999999983 356788889999999999999999999999999999876665 34566665542
Q ss_pred ccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 162 LLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+|++++++.+++ ++++|++.+|+||||.+++ +++|+++|+++|+++|+|++|+.... ..++ ..
T Consensus 124 --------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~l-~~ 187 (385)
T PRK08574 124 --------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRPL-RH 187 (385)
T ss_pred --------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CChh-hh
Confidence 367899999887 8999999999999999976 77889999999999999999965321 1122 12
Q ss_pred CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+ ..+++.|++|.++.+|-.+ |++++.+ +++.+++..... .....+++....+...|+. +..+.
T Consensus 188 G---aDivv~S~sK~l~g~~d~~gG~vi~~~-------~~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~t-----L~~R~ 252 (385)
T PRK08574 188 G---ADFVVHSLTKYIAGHNDVVGGVAVAWS-------GEFLEELWEWRRRLGTIMQPFEAYLVLRGLKT-----LEVRF 252 (385)
T ss_pred C---CcEEEeeCceeecCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcccCc-----HHHHH
Confidence 2 2388999999987766554 6566643 245555544433 2234444444443333432 55566
Q ss_pred HHHHHHHHHHHHHhhcCCCcc
Q 014631 319 DILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~ 339 (421)
++..++...+.+.|+++|.+.
T Consensus 253 ~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 253 ERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCcC
Confidence 677778888899998877664
No 223
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=4e-22 Score=190.20 Aligned_cols=353 Identities=16% Similarity=0.140 Sum_probs=217.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|...... ...+|.+.+++.+++++... +.......+....+++.+.+..+ ....+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p-~~~~~~v~f~~SGse 112 (425)
T PRK07495 37 KEGRRYIDFAAGIAVVNT-GHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVP-GDFAKKTIFVTTGAE 112 (425)
T ss_pred CCCCEEEEccccHHhhcc-CCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCC-CCCCCEEEECCchHH
Confidence 358899999888544332 35789999999999986321 11111112344445555544332 111258999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccCC----HHHHHhhhc
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEVD----LDGLEALAD 180 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~d----~e~l~~~~~ 180 (421)
|+..+++... ....+|+....+|+++...+... |. .+..+|.+.+. .+.+ ++++++.+.
T Consensus 113 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~ 191 (425)
T PRK07495 113 AVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFK 191 (425)
T ss_pred HHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHH
Confidence 9999988653 12367999999999875443321 11 12223332111 1122 444566543
Q ss_pred ----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 181 ----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 181 ----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
.+..+.++..| +..+|. .+|++.+++|.++|++||+++|+||+|+++.+.|.. ......+. ...+.++||
T Consensus 192 ~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~-~a~~~~gv---~pDi~tlsK 267 (425)
T PRK07495 192 ADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKL-FAMEHHEV---AADLTTMAK 267 (425)
T ss_pred hccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCc-eeecccCC---CCCEEeehh
Confidence 23344556666 333774 578899999999999999999999999988777653 22222222 234568999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHh-
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRI- 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l- 332 (421)
.++ +|+|+|+++++ .++++.+.... ..+.+.+++.++++.++++...+.. ..++.+++.+++.+.|
T Consensus 268 ~l~-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~~L~ 335 (425)
T PRK07495 268 GLA-GGFPLAAVTGR--------AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQRLA 335 (425)
T ss_pred hhc-CCccceEEEEc--------HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHH
Confidence 964 78999999996 35666654432 2355788899998877776533222 2233333333333333
Q ss_pred ---hcCCCccccCCCCceeEEEEecCcccccCCCCh--HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHH
Q 014631 333 ---KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD--MEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEE 405 (421)
Q Consensus 333 ---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~ 405 (421)
+++|.+..+ .. .|++.|+++...... ..+. ...+...+.++|+++.+.... .+.+|+.++ .+++++++
T Consensus 336 ~l~~~~~~i~~v-rG-~Gl~~~iel~~~~~~-~~~~~~~~~~~~~~~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~~id~ 410 (425)
T PRK07495 336 SLRETVPEIADI-RG-PGFMNAVEFNDADSG-LPSAEFANRVRLKALEKGLILLTCGVH--GNVIRFLAPITIQDDVFAE 410 (425)
T ss_pred HHHhhCCCeeee-ec-CceEEEEEEecCCCC-CccHHHHHHHHHHHHHCCeEEeecCCC--CCEEEEeCCCccCHHHHHH
Confidence 334444323 22 288999998542110 0111 223334456789999763221 478999987 79999999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
++++|+++++++++
T Consensus 411 ~~~~l~~~l~~~~~ 424 (425)
T PRK07495 411 ALDILEASILEASA 424 (425)
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999988764
No 224
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.92 E-value=9.2e-23 Score=191.47 Aligned_cols=218 Identities=15% Similarity=0.181 Sum_probs=157.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCce
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLE 156 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~ 156 (421)
+| +.....+|+++++++. .++.+++++|++++..++.+++++||+|++++|+|+++...+ ...|++
T Consensus 47 ry-~~p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~ 116 (366)
T PRK07582 47 RA-SNPTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVT 116 (366)
T ss_pred CC-CCccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEE
Confidence 44 4456789999999986 235666667778999999999999999999999998876544 346888
Q ss_pred eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 236 (421)
++.++.... .+ .+.++++++++++|+||||.+ .++++|+++|+++|+++|+|++|.... +.. +
T Consensus 117 v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v---~di~~I~~~a~~~g~~lvVD~t~~~~~--~~~--p 179 (366)
T PRK07582 117 VREAPTAGM------AE----AALAGADLVLAETPSNPGLDV---CDLAALAAAAHAAGALLVVDNTTATPL--GQR--P 179 (366)
T ss_pred EEEECCCCh------HH----HhccCceEEEEECCCCCCCCc---cCHHHHHHHHHHcCCEEEEECCCCCcc--ccC--c
Confidence 888875321 11 223578899999999999987 469999999999999999999996421 221 2
Q ss_pred ccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHH
Q 014631 237 MGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
+. ++. .+++.|+||.++. +|+++||+++++ +++.+.+...... ..+++++....+...++. +
T Consensus 180 ~~-~g~---Divv~S~sK~l~G~~g~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t-----l 243 (366)
T PRK07582 180 LE-LGA---DLVVASDTKALTGHSDLLLGYVAGRD-------PELMAAVERWRLLAGAIPGPFEAWLAHRSLGT-----L 243 (366)
T ss_pred hh-cCC---cEEEecccccccCCCCeeEEEEEcCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHhcccc-----H
Confidence 21 222 2788999999854 679999999753 3466666554432 335566666655555543 4
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 315 SKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
..+.++.+++...+.+.|+++|.+..+
T Consensus 244 ~~R~~~~~~na~~la~~L~~~p~v~~v 270 (366)
T PRK07582 244 GLRFARQCANALAVAELLAGHPAVRGV 270 (366)
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 555677778999999999988776533
No 225
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.92 E-value=1.8e-22 Score=190.62 Aligned_cols=221 Identities=19% Similarity=0.257 Sum_probs=160.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch----HHHHhhcCc
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY----EANARHTRL 155 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~----~~~~~~~g~ 155 (421)
.+|+ .....++++.++++.+ .+.++++++|++++..++.+++++||+|+++.+.|.+. ...+...|.
T Consensus 49 ~r~~-~p~~~~le~~la~l~g--------~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~ 119 (380)
T TIGR01325 49 SRYA-NPTVAAFEERIAALEG--------AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGI 119 (380)
T ss_pred ecCC-CchHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCC
Confidence 3444 3346899999999873 24678899999999999999999999999999988754 334566788
Q ss_pred eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
++..++.+ |++++++.+++++++|++++|+||+|... ++++|.++|+++|+++|+|++|+..... .
T Consensus 120 ~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~---dl~~I~~la~~~gi~livD~a~~~~~~~-~--- 185 (380)
T TIGR01325 120 EVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELV---DIAALAELAHAIGALLVVDNVFATPVLQ-Q--- 185 (380)
T ss_pred EEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeee---CHHHHHHHHHHcCCEEEEECCCcccccC-C---
Confidence 88877642 68899998888899999999999999995 5888999999999999999999764321 1
Q ss_pred cccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhH
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
++ .++. .+++.|+||.++.+|.++ |+++++ +++.+.+...... ....++.....+...+ ..
T Consensus 186 pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~--------~~~~~~l~~~~~~~g~~~~p~~a~~~l~~l-----~t 248 (380)
T TIGR01325 186 PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGS--------EELMAEVAVYLRHTGPAMSPFNAWVLLKGL-----ET 248 (380)
T ss_pred ch-hhCC---CEEEeeccceecCCCCeEEEEEEeC--------HHHHHHHHHHHHhhCCCCCHHHHHHHHhcc-----Cc
Confidence 22 2222 377889999998888877 556553 2455555544322 2233444433332223 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCITC 340 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~ 340 (421)
+..+.++..+++..+.+.|+++|++..
T Consensus 249 l~~r~~~~~~~a~~la~~L~~~p~v~~ 275 (380)
T TIGR01325 249 LSLRMQKQFDSALAIAEWLQAQPQVQA 275 (380)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccE
Confidence 555677778888889999998877653
No 226
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=3.4e-22 Score=192.38 Aligned_cols=354 Identities=17% Similarity=0.136 Sum_probs=217.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|......+ ..+|.+.+++.+++++......... ..+....+++.+.+..+ ...+.++|+++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~a~~~q~~~~~~~~~~~~--~~~~~~~la~~L~~~~~--~~~~~v~f~~SGse 114 (433)
T PRK08117 40 VDGKEYLDFTSGIAVANVG-HRHPKVVQAIKEQADKLMHGPSGVI--YYESILKLAEELAEITP--GGLDCFFFSNSGAE 114 (433)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccCcccccc--CCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHH
Confidence 3488999998885443333 5789999999999986321111101 12333444444443332 23468999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-C--c-----------eeEeeeccCCC--Ccc--------CCHHH
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-R--L-----------EIRHFDLLPEK--GWE--------VDLDG 174 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g--~-----------~~~~~~~~~~~--~~~--------~d~e~ 174 (421)
|+..+++... -.| .+|+..+.+|++....+... + . .+..+|.+... ..+ -++++
T Consensus 115 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (433)
T PRK08117 115 AIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRD 194 (433)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHH
Confidence 9999998642 123 67888899999875443211 1 0 01222221100 000 14555
Q ss_pred HHhhhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 175 LEALAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 175 l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
+++.+. .+..+.++..| +...|.+ .+++.++++.++|++||+++|+||+|+++.+.|.... ...++... .
T Consensus 195 l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~p---D 270 (433)
T PRK08117 195 LESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVVP---D 270 (433)
T ss_pred HHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCCC---C
Confidence 666543 23345566777 5566766 5778899999999999999999999999877775432 12222221 2
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
+.|+||.++ +|+++|+++++ +++++.+.... ..+.+.++++++++.++|+...+. +..++++++.++
T Consensus 271 i~t~sK~lg-~G~pigav~~~--------~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~ 338 (433)
T PRK08117 271 IMTIAKGIA-SGLPLSAVVAS--------KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE---KLLDNANEMGAY 338 (433)
T ss_pred Eeehhhhcc-CCCcceeEEEc--------HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHH
Confidence 458999986 78999999985 35666664332 234567899999998888753222 233344444555
Q ss_pred HHHHhhc----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631 328 CYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS 401 (421)
Q Consensus 328 ~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e 401 (421)
+.+.|.+ ++.+. ..+..|.++++++..............+...+.++||.+.+... ..+.+|++++ .+++
T Consensus 339 l~~~L~~l~~~~~~~~--~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~~ 414 (433)
T PRK08117 339 ALERLEVLKEKHPVIG--DVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTKE 414 (433)
T ss_pred HHHHHHHHHhcCCcee--eeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCHH
Confidence 5555543 32222 12344667777774321000001223344455778998876321 2478999975 8999
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 014631 402 ALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~~~ 419 (421)
+|++++++|.++++++.+
T Consensus 415 ~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 415 EIDEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 999999999999988754
No 227
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.92 E-value=5.2e-24 Score=184.46 Aligned_cols=373 Identities=18% Similarity=0.201 Sum_probs=266.3
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPC-FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
.++++.|+++|.++...|+.+. .+..|||+.|.-....+ +-..+.|.+|-++.+.......|-|..|++++.+..
T Consensus 29 s~V~maPpDpILGVTeAfk~D~----n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~s 104 (427)
T KOG1411|consen 29 SHVEMAPPDPILGVTEAFKKDP----NPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLS 104 (427)
T ss_pred hcCCCCCCCCcccHHHHHhcCC----CcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHH
Confidence 5788899999999999998766 77889999997654444 335677888877777655556899999999999999
Q ss_pred HHHHhhhCCCCCCCCcEEEc--CCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631 96 ADYLNSELPCKLSPDDVYLT--AGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD 171 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~~--~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 171 (421)
++++-..-...+...+|+.+ -+||.|+......+ .-++..|.+++|+|.+...+....|..+..+..-.....++|
T Consensus 105 akLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld 184 (427)
T KOG1411|consen 105 AKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLD 184 (427)
T ss_pred HHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccccccc
Confidence 99984322223345567654 45788888877766 357899999999999999999999998877665333345688
Q ss_pred HHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCCC
Q 014631 172 LDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTVP 245 (421)
Q Consensus 172 ~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~~ 245 (421)
.+.+.+-+.. +..+++....|||||+-.+.++|++|.++.++.+.+-++|.+|.+|..+.-. ..++..+ ....+
T Consensus 185 ~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~ 264 (427)
T KOG1411|consen 185 FKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHE 264 (427)
T ss_pred hHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCc
Confidence 8877665543 2223333344999999999999999999999999999999999998754321 1112212 22346
Q ss_pred EEEEcccccccCCCCceEEEE--EeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc--hhHH---HHH
Q 014631 246 VITLGSMSKRWIVPGWRLGWL--VTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK--EDFF---SKI 317 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~--~~~~---~~~ 317 (421)
++++.|++|..|+.|-|+|.+ ++.+.+. ...+..+++... ..+++|+......+...|++.. ..|. +-.
T Consensus 265 ~~laQSyAKNMGLYgERvGa~svvc~~ad~---A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~evk~M 341 (427)
T KOG1411|consen 265 ILLAQSYAKNMGLYGERVGALSVVCKDADE---AKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGEVKGM 341 (427)
T ss_pred eEeehhhhhhcchhhhccceeEEEecCHHH---HHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHHHHHH
Confidence 788899999999999999985 4432211 112344444443 2456787788888888887633 3443 344
Q ss_pred HHHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 318 VDILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
..++...+..+.+.|+.. ++ |..+ ..+-|+|.+..+. .+.++.|.+++.|++.-- -||
T Consensus 342 adRi~~mR~~L~d~L~~~gs~~~W~hI-~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~d--------GRi 402 (427)
T KOG1411|consen 342 ADRIISMRQQLFDALEKEGSPGNWSHI-TKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKD--------GRI 402 (427)
T ss_pred HHhhhhhHHHHhHHhhcCCCCccHHHH-HHhhheeeecCCC----------HHHHHHHHhhheeeeccC--------ceE
Confidence 567777788888888753 22 3312 3455888877663 356788889999998631 299
Q ss_pred Eec-CCHHHHHHHHHHHHHHHH
Q 014631 395 TFA-IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 395 ~~~-~~~e~l~~~~~~l~~~~~ 415 (421)
|++ .+...+..+.++|+++.+
T Consensus 403 S~aG~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411|consen 403 SMAGLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred eeccccccCCcccchhhHhHhc
Confidence 998 777888888888887754
No 228
>PRK05968 hypothetical protein; Provisional
Probab=99.92 E-value=3.4e-22 Score=189.05 Aligned_cols=283 Identities=15% Similarity=0.109 Sum_probs=191.2
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~ 162 (421)
...+|++.++++.+ . . ..+++++|+.|+..++.+++++||+|+++.+.|.+.. ..+...|+++..++.
T Consensus 64 ~~~~le~~lA~l~g------~-~-~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (389)
T PRK05968 64 TVRAFEEMLAKLEG------A-E-DARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDG 135 (389)
T ss_pred hHHHHHHHHHHHhC------C-C-cEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCC
Confidence 36799999999973 2 2 3445566678999998888999999999999998643 455667888887753
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
.|++++++.+ +++++|++.+|+|+++.. .++++|.++|+++|+++|+|++|+...+.. ++ ..+.
T Consensus 136 -------~d~~~l~~~i-~~tklV~ie~pt~~~~~~---~dl~~i~~la~~~gi~vivD~a~a~~~~~~----p~-~~g~ 199 (389)
T PRK05968 136 -------RDEEAVAKAL-PGAKLLYLESPTSWVFEL---QDVAALAALAKRHGVVTMIDNSWASPVFQR----PI-TLGV 199 (389)
T ss_pred -------CCHHHHHHhc-ccCCEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcchhccC----ch-hcCC
Confidence 2788998887 578899998777776655 899999999999999999999997654221 22 1222
Q ss_pred CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
.+++.|+||.++.+| .+.|+++++ +++++++..... .....++..+..+...|+. +..+.+
T Consensus 200 ---Divv~S~tK~l~g~~~~~gG~i~~~--------~~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t-----l~~r~~ 263 (389)
T PRK05968 200 ---DLVIHSASKYLGGHSDTVAGVVAGS--------KEHIARINAEAYPYLGAKLSPFEAWLLLRGLRT-----LPLRMK 263 (389)
T ss_pred ---cEEEeeccccccCCCCeEEEEEEEC--------HHHHHHHHHHHHHhCCCCCChHHHHHHHcccCc-----HHHHHH
Confidence 277889999988755 578888864 245555554322 2234555555555444543 466666
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCC-----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPE-----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG- 387 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~- 387 (421)
+.+++...+.+.|+++|++..+..|. .+..+.+.++.. .+..+|+..| +..++.+.-|..+.
T Consensus 264 ~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~s~G~~~sl 337 (389)
T PRK05968 264 AHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGVSWGGHESL 337 (389)
T ss_pred HHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEecCCCCCCce
Confidence 77778888999999998886454441 122444556421 1345666654 55565555444332
Q ss_pred ---------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 388 ---------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 388 ---------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
. ++.+|+|++.. +.+.+++.|.+++++.
T Consensus 338 v~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 338 VVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAAA 387 (389)
T ss_pred eeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence 1 35799999942 3455566666666543
No 229
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=5.4e-22 Score=187.02 Aligned_cols=302 Identities=17% Similarity=0.189 Sum_probs=200.6
Q ss_pred HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCCCcch
Q 014631 68 DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPGFPLY 146 (421)
Q Consensus 68 ~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~ 146 (421)
+++.+.+..+. |.......++++.++++++ .+++++++||++++..++..+ .++||+|+++.++|.++
T Consensus 3 ~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~--------~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGW---LTLGPKVREFEKAFAEYLG--------VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCC---ccCCHHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 45556665532 3333457899999999983 246888889999999999988 58999999999999999
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
...+...|.+++.+++++ +++.+|++++++.++++++++++++ ++|... ++++|.++|+++|+++|+|++|+.
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~---~~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPA---DMDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcC---CHHHHHHHHHHcCCeEEEECCCCC
Confidence 999999999999998754 3567899999998888888888764 689874 478888999999999999999986
Q ss_pred cccCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc--------------
Q 014631 227 LTFGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-------------- 290 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------------- 290 (421)
...... ..+... ..+.+.|++ |++ ++.+.|++++++ +++.+.++.....
T Consensus 145 g~~~~~--~~~~~~----~d~~~~S~~~~K~~--~~~~gg~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd00616 145 GATYKG--RKVGTF----GDAGAFSFHPTKNL--TTGEGGAVVTND-------EELAERARLLRNHGRDRDRFKYEHEIL 209 (352)
T ss_pred CCeECC--EEcccC----cceeEEcCCCCCCC--cccCceEEEECC-------HHHHHHHHHHHHcCCCCCCCcccccee
Confidence 431110 011111 124566766 886 333468888754 2344444332110
Q ss_pred --ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----ceeEEEEecCcccccCCCC
Q 014631 291 --SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----GSMFVMVKLNLSLLEGISD 364 (421)
Q Consensus 291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~ 364 (421)
....+.+....+... ...+++..++.+++.+++.+.|.+++++.+...+. ....+.+.++.. ...+
T Consensus 210 ~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 281 (352)
T cd00616 210 GYNYRLSEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES 281 (352)
T ss_pred eeccCcCHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence 011222222222111 23457777788899999999999988888442222 122333344320 0124
Q ss_pred hHHHHHHHHhhcCeeEEeCCCCCC-----------------------CCeEEEEec--CCHHHHHHHHHHHH
Q 014631 365 DMEFALQLAKEESVIVLPGMAVGM-----------------------KNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 365 ~~~~~~~ll~~~gv~v~~g~~~~~-----------------------~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
..++...| +++||.+........ .+.+|++++ ++++|++.+++.|+
T Consensus 282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 55666654 677997653221100 257999998 89999999998873
No 230
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.92 E-value=1.2e-21 Score=186.85 Aligned_cols=351 Identities=14% Similarity=0.095 Sum_probs=210.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEE-cCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL-SPDDVYL-TAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~-~~g~ 118 (421)
..|..++||..|.-.... ...+|.+.+++++++.+... .. ......+.+..+++.+.+....+. ..+.+++ +++|
T Consensus 32 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~-~~-~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sG 108 (412)
T TIGR02407 32 EDGKEYIDFFAGAGALNY-GHNNPKLKQALIDYLADDGI-IH-SLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTG 108 (412)
T ss_pred CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhccc-ee-ccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCc
Confidence 458899999888644332 35789999999999875211 11 111123444555555543211011 1124655 5899
Q ss_pred HHHHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCCc-cCCHHHHHhhhcc-
Q 014631 119 KQAIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKGW-EVDLDGLEALADE- 181 (421)
Q Consensus 119 ~~al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~d~e~l~~~~~~- 181 (421)
++|+..+++.... .| .+|+....+|++....+... |. .+..+|.+..... .-+++.+++.+..
T Consensus 109 seA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~ 188 (412)
T TIGR02407 109 TNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDS 188 (412)
T ss_pred hHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhc
Confidence 9999999987542 33 68999999999986554432 11 1122222110000 0136667776642
Q ss_pred ----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631 182 ----NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR 255 (421)
Q Consensus 182 ----~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 255 (421)
+..+.++..| +++.|. ..|.+.+++|.++|++||+++|+||+++++.+.|..+. ....+.... +.+++|.
T Consensus 189 ~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~~~~~v~PD---i~~~~K~ 264 (412)
T TIGR02407 189 SSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFS-FEPAGIEPD---IVCLSKS 264 (412)
T ss_pred cCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHH-hcccCCCCC---EEEechh
Confidence 1224445566 788888 57889999999999999999999999998877665432 122222222 2368899
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhc-cchhHH-HHHHHHHHHHHHHHHHHh
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKN-TKEDFF-SKIVDILRDTADICYDRI 332 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~~~~~~~~~~~~~~~l 332 (421)
++..|+|+|++++++ ++ +.+... ...+.+.+++...++.++++. ..+..+ ++..+.-+..++.+.+..
T Consensus 265 lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l~ 335 (412)
T TIGR02407 265 ISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRIV 335 (412)
T ss_pred ccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 654499999999963 23 333222 223456778877776666663 222222 222222222233333333
Q ss_pred hcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
+.++++. ...+..|+++|++++... ....+... +.++||.+.+...+ .+.+|++++ .+++++++++++|
T Consensus 336 ~~~~~~~-~~vrg~Gl~~~l~l~~~~-----~~~~~~~~-~~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~~l 406 (412)
T TIGR02407 336 AEYPELI-KQVRGRGLMQGIECGDGD-----LAGKIAKA-AFENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGLDIL 406 (412)
T ss_pred hhCCCce-EeeecceeEEEEEecChH-----HHHHHHHH-HHHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHHHH
Confidence 3344332 223556889999997421 12344444 56789999874321 467999988 7999999999999
Q ss_pred HHHHHH
Q 014631 411 KAFCQR 416 (421)
Q Consensus 411 ~~~~~~ 416 (421)
.+++++
T Consensus 407 ~~~l~~ 412 (412)
T TIGR02407 407 EQAVEE 412 (412)
T ss_pred HHHHhC
Confidence 999864
No 231
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.92 E-value=1.3e-21 Score=187.34 Aligned_cols=351 Identities=17% Similarity=0.134 Sum_probs=212.7
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEE-cCC
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYL-TAG 117 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~-~~g 117 (421)
..|.+++||..|...... ...+|.+.+++.+++.+. ..+.. ....+.+..+++.+.+....+.. .+.++| +++
T Consensus 36 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~---~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 36 EDGKEYIDFFAGAGALNY-GHNNPVLKQALIDYLQRDGITHGL---DMHTTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred CCCCEeeecccchhhccC-CCCCHHHHHHHHHHHHhccccccc---ccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 458899999888644333 357899999999998852 11111 11123444445544432110111 225656 589
Q ss_pred HHHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCCcc-CCHHHHHhhhcc
Q 014631 118 CKQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKGWE-VDLDGLEALADE 181 (421)
Q Consensus 118 ~~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~~~-~d~e~l~~~~~~ 181 (421)
|++|+..+++... ..| .+|+....+|+++...+... +. .+..+|.+...... -|++++++.+..
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 9999999998753 233 67889999999876544322 10 12223321100000 156777777642
Q ss_pred -----CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 182 -----NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 182 -----~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
+..+.++..| +...|. .+|++.+++|.++|++||+++|+||+|+++++.|..+ ....++...++ .+++|
T Consensus 192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi---~t~~K 267 (425)
T PRK09264 192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDI---VTLSK 267 (425)
T ss_pred ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCE---EEecc
Confidence 1234556666 556676 5688999999999999999999999999887766532 22222222223 36789
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.++..|+++|++++++ ++ ..+... ...+.+.++++..++.++++.... -.+..++.+++.+++.+.|+
T Consensus 268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~--~~~l~~~~~~~g~~l~~~l~ 336 (425)
T PRK09264 268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWS--DDAFEKEVKAKGELVRERLE 336 (425)
T ss_pred ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHHH
Confidence 9876699999999963 23 223221 123446777777777677732111 11234444445555554443
Q ss_pred c----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 334 E----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 334 ~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
+ .|.+. ......|++.++.++... ....++. .+.++||.+.+...+ ...+|++++ .+++++++++
T Consensus 337 ~l~~~~~~~~-~~vrg~Gl~~~i~l~~~~-----~~~~l~~-~~~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~~ 407 (425)
T PRK09264 337 EIAAKYPGLG-AEVRGRGMMQGIDFGDGE-----LAGKIAA-EAFENGLIIETSGPE--DEVVKLLPPLTIDEEELEEGL 407 (425)
T ss_pred HHHHhCCCce-ecceecccEEEEEecChH-----HHHHHHH-HHHHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHHH
Confidence 3 43331 112345778888886421 1334544 456789999875332 367899887 8899999999
Q ss_pred HHHHHHHHHhhh
Q 014631 408 GRIKAFCQRHAK 419 (421)
Q Consensus 408 ~~l~~~~~~~~~ 419 (421)
++|.+++++..+
T Consensus 408 ~~l~~~l~~~~~ 419 (425)
T PRK09264 408 DILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHHh
Confidence 999999977643
No 232
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.92 E-value=4.8e-22 Score=190.72 Aligned_cols=347 Identities=16% Similarity=0.159 Sum_probs=216.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++||..|......+ ..+|.+.+++.+++++.....+... ..+.+..+++.+.+..+ ...+.++++++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~q~~~~~~~~~~~~--~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 113 (423)
T PRK05964 39 ADGRELIDAISSWWVATHG-HNHPYIDQAIREQLDRLDHVIFAGF--THEPAERLAQRLVALTP--GGLDHVFFSDSGSV 113 (423)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHhhCCCcccccc--CCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 3588999998885443333 5689999999999986321111111 12445556666654332 12468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHhhh
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
|+..+++.... +| .+|+....+|++....+...+.. ...++.+..+....+++.+++.+
T Consensus 114 A~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l 193 (423)
T PRK05964 114 AVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALL 193 (423)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHH
Confidence 99999886531 33 58999999999876544332211 12222211110111277777777
Q ss_pred cc--CceEEEEeCC--CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 180 DE--NTVAMVIVNP--GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 180 ~~--~~~~i~~~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
.. +..+.++..| ++.+|... +.+.+++|.++|++||+++|+||+|+++.+.|..+ ....++.... +.+++|
T Consensus 194 ~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD---i~~~~K 269 (423)
T PRK05964 194 EKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD---IMCLSK 269 (423)
T ss_pred HhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC---eeeeeh
Confidence 42 2333455566 66678765 88999999999999999999999999887666432 2222222222 337889
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
+++.+++++|+++++ +++.+.+... ...+.+.+++...++.++++...+ ++..++.+++.++
T Consensus 270 ~l~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~---~~~~~~~~~~g~~ 338 (423)
T PRK05964 270 GLTGGYLPLAATLCT--------AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFED---EPVLERVAALSAG 338 (423)
T ss_pred hhhcCcccceEEEEc--------HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHH
Confidence 986555899998885 4677766421 112335788888888888874221 1233444444555
Q ss_pred HHHHhhc---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631 328 CYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA 402 (421)
Q Consensus 328 ~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~ 402 (421)
+.+.|++ .|.+..+ . ..|.+..+.+..... ......+... +.++||.+.+. .+.+|++++ ++++|
T Consensus 339 l~~~l~~l~~~~~i~~v-r-g~Gl~~~i~l~~~~~--~~~~~~l~~~-l~~~Gv~v~~~-----~~~lR~~p~l~~t~ed 408 (423)
T PRK05964 339 LAEGLEPFRDLPGVADV-R-VLGAIGAVELDRPVL--ERDGPALRAF-ALERGVLLRPL-----GNTIYLMPPYIITAEE 408 (423)
T ss_pred HHHHHHhhccCCCeEEe-e-cccEEEEEEeccCcc--hhHHHHHHHH-HHHCCeEEEec-----CCEEEEeCCcccCHHH
Confidence 5555544 3433211 2 235566666753210 0013345554 46789999874 257999988 89999
Q ss_pred HHHHHHHHHHHHHHh
Q 014631 403 LEEGLGRIKAFCQRH 417 (421)
Q Consensus 403 l~~~~~~l~~~~~~~ 417 (421)
|++++++|+++++++
T Consensus 409 Id~~v~~l~~al~~~ 423 (423)
T PRK05964 409 LDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998764
No 233
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=1.6e-21 Score=183.40 Aligned_cols=310 Identities=17% Similarity=0.239 Sum_probs=195.5
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK 140 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~ 140 (421)
..+...+++.+.+..+...+.++ -..++++.+++++ | .+++++|+|+++++.+++.++ .+|||+|+++.
T Consensus 9 ~~~~e~~a~~~~~~~~~~~~~g~--~~~~~e~~la~~~----g----~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~ 78 (376)
T TIGR02379 9 VTGQELEYIAEAISEGKLSGDGP--FSRRCETWLENRT----G----TKKALLTPSCTAALEMAALLLDIQPGDEVIMPS 78 (376)
T ss_pred CCHHHHHHHHHHHHcCCccCCcH--HHHHHHHHHHHHh----C----CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 34566788888887643311111 1245555555543 2 468999999999999999887 79999999999
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
++|.++...+...|++++.+++++ +++.+|++++++++++++++|+ |+||+|... ++++|.++|++||++||+
T Consensus 79 ~t~~~~~~~~~~~G~~~v~vd~d~-~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~---d~~~I~~la~~~~i~vIe 151 (376)
T TIGR02379 79 YTFVSTANAFVLRGAKIVFVDIRP-DTMNIDETLIESAITHRTKAIV---PVHYAGVAC---DMDTIMALANKHQLFVIE 151 (376)
T ss_pred CCcHHHHHHHHHcCCEEEEEecCC-CcCCCCHHHHHHhcCcCceEEE---EeCCCCCcc---CHHHHHHHHHHCCCEEEE
Confidence 999999888999999999999865 3477999999999988888875 677899885 477999999999999999
Q ss_pred cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc------
Q 014631 221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS------ 291 (421)
Q Consensus 221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 291 (421)
|++|+.+. +.|... ..+. .+.+.||+ |.+ .+|.+.|++++++ +++.++++......
T Consensus 152 Daa~~~g~~~~~~~~---g~~~----~~~~fSf~~~K~l-~~g~~gG~v~~~~-------~~~~~~~~~~~~~g~~~~~~ 216 (376)
T TIGR02379 152 DAAQGVMSTYKGRAL---GSIG----HLGTFSFHETKNY-TSGGEGGALLIND-------QAFIERAEIIREKGTNRSQF 216 (376)
T ss_pred ECccccCCccCCccc---CCCC----CEEEEeCCCCCcC-cccCCceEEEECC-------HHHHHHHHHHHHhCCCCccc
Confidence 99998865 444321 1111 13333443 664 5677889998865 34555554432210
Q ss_pred ----------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC--C-ccccCCCCc---e-e
Q 014631 292 ----------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP--C-ITCPRKPEG---S-M 348 (421)
Q Consensus 292 ----------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~---~-~ 348 (421)
.-.+.+..+.+...| ..+++..++-++..+...+.|.+++ + +.....+.+ . .
T Consensus 217 ~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL-----~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~ 291 (376)
T TIGR02379 217 FRGEVDKYTWRDIGSSYLPSELQAAYLWAQL-----EQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAH 291 (376)
T ss_pred cccCCCcceeeeecccCCccHHHHHHHHHHH-----HHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeE
Confidence 011112211122223 3355555555555556666666543 2 221111211 1 2
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC----------CC------------CCeEEEEec--CCHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV----------GM------------KNWLRITFA--IEPSALE 404 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~~------------~~~iRi~~~--~~~e~l~ 404 (421)
++++.++.. .+-.++. ..|+++||.+.++... .. ...+.+-+. .++++++
T Consensus 292 ~~~i~~~~~-----~~r~~l~-~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~ 365 (376)
T TIGR02379 292 MFYIKLKDE-----DDRNELI-KYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQA 365 (376)
T ss_pred EEEEEECCc-----CCHHHHH-HHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHH
Confidence 334555431 1233444 4557889987743211 00 123444444 5789999
Q ss_pred HHHHHHHHHH
Q 014631 405 EGLGRIKAFC 414 (421)
Q Consensus 405 ~~~~~l~~~~ 414 (421)
.+++.|++++
T Consensus 366 ~i~~~i~~~~ 375 (376)
T TIGR02379 366 RVIQTICDYL 375 (376)
T ss_pred HHHHHHHHHh
Confidence 9999998864
No 234
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=2.9e-22 Score=189.45 Aligned_cols=217 Identities=18% Similarity=0.195 Sum_probs=159.6
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~ 160 (421)
.....+|++.++++.+ .+++++++|+++|+.+++.+++++||+|++++|.|.++.. .+...|+++..+
T Consensus 64 ~pt~~~Le~~lA~l~g--------~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~v 135 (394)
T PRK07050 64 TPTSLALAQRLAEIEG--------GRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFY 135 (394)
T ss_pred CHHHHHHHHHHHHHhC--------CCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEE
Confidence 3446889999999873 4689999999999999999999999999999999998663 456678888876
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+.. +.+++++.+++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|....+ ..++ ..
T Consensus 136 d~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~---~di~~I~~ia~~~gi~livD~a~a~~~~----~~~l-~~ 200 (394)
T PRK07050 136 DPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEV---PDVPAITAAARARGVVTAIDNTYSAGLA----FKPF-EH 200 (394)
T ss_pred CCC-------CHHHHHHhcCCCCeEEEEECCCCCCccH---hhHHHHHHHHHHcCCEEEEECCcccccc----cCHH-Hc
Confidence 531 4467888888899999999999999766 8899999999999999999999976331 1121 11
Q ss_pred CCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+ ..+++.|++|.++. .+.+.|++++.+ +++.+++...... ..+.++.....+...|+. +..+.
T Consensus 201 G---aDi~v~S~tK~~~g~~~~~gG~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~t-----l~~Rl 265 (394)
T PRK07050 201 G---VDISVQALTKYQSGGSDVLMGATITAD-------AELHAKLKLARMRLGIGVSADDCSLVLRGLPS-----LQVRL 265 (394)
T ss_pred C---CeEEEEECCceecCCCCeeEEEEEECC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCCc-----HHHHH
Confidence 2 23889999999753 345689888754 3466666555432 334555554443333322 44456
Q ss_pred HHHHHHHHHHHHHhhcCCCcc
Q 014631 319 DILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~ 339 (421)
++..++...+.+.|+++|.+.
T Consensus 266 ~~~~~~a~~la~~L~~~p~v~ 286 (394)
T PRK07050 266 AAHDRSALEVAEWLKARPEIA 286 (394)
T ss_pred HHHHHHHHHHHHHHHhCCCcc
Confidence 666677778888888877655
No 235
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.91 E-value=4.2e-22 Score=204.24 Aligned_cols=339 Identities=14% Similarity=0.100 Sum_probs=226.1
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCC-CCCC----CCCCHHHHHHHHHHHhhhCCCCCCCC--cEEEcC
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFD-CYSP----SVGILPARRAIADYLNSELPCKLSPD--DVYLTA 116 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~-~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~--~i~~~~ 116 (421)
+++|+.+..+ ++.+..+.+++.+..... +.+ .|.. ..-+.+.|+.++++++ ++++ +|+||+
T Consensus 35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lg------a~~~~~~VvFts 104 (805)
T PLN02724 35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFN------APPSDYACVFTS 104 (805)
T ss_pred CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhC------CCccceEEEEeC
Confidence 7899988755 234456666666655431 111 1111 1235688888888873 4454 589999
Q ss_pred CHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCC------CCccCCH--HHHHhhh-----
Q 014631 117 GCKQAIQVILTVL-ARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPE------KGWEVDL--DGLEALA----- 179 (421)
Q Consensus 117 g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~------~~~~~d~--e~l~~~~----- 179 (421)
|+|+++++++.++ .++||+|++..-.|.+... .++..|+++..++++.. ....+++ +++++.+
T Consensus 105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 9999999999987 6789999998888876543 34456889988887521 1112332 5565543
Q ss_pred -----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc-----CcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 180 -----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL-----GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 180 -----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
.++++++.+++.+|.||.++|.+.++++.+.++.+ ++++++|.+++. |....++..++.+ +++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~ 257 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV 257 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence 13567889999999999999877555444433332 368999999987 5555566666554 888
Q ss_pred cccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------------cccccCCchHHHHHHH
Q 014631 250 GSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------------LNISSGPATFVQGAVP 303 (421)
Q Consensus 250 ~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~ 303 (421)
.|++|+|| ..| +|++++++ ++.+.+... +...++++.....++.
T Consensus 258 ~S~HK~~GgP~G--~G~L~vr~--------~~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~ 327 (805)
T PLN02724 258 VSFYKIFGYPTG--LGALLVRR--------DAAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALR 327 (805)
T ss_pred EecceeccCCCC--ceEEEEeh--------hhhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHH
Confidence 89999987 335 79999864 222222211 1113467777777777
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC------CccccCCCC--------ceeEEEEecCcccccCCCChHHHH
Q 014631 304 QIFKNTKEDFFSKIVDILRDTADICYDRIKEIP------CITCPRKPE--------GSMFVMVKLNLSLLEGISDDMEFA 369 (421)
Q Consensus 304 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------g~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~ 369 (421)
++++.....+++.+.++.+.+.+++.+.|++++ ++. ++.+. .+..+.+.+.... +..-....+
T Consensus 328 aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~-iyg~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v 404 (805)
T PLN02724 328 HGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCV-LYGNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREV 404 (805)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEE-EcCCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHH
Confidence 777764445678889999999999999999875 465 33332 1233333343211 000123445
Q ss_pred HHHHhhcCeeEEeCCCCCC-----------------------------------CCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 370 LQLAKEESVIVLPGMAVGM-----------------------------------KNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 370 ~~ll~~~gv~v~~g~~~~~-----------------------------------~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
..++.++||.++.|..|.. .+.+|+|++ ++.+|++++++.|++
T Consensus 405 ~~l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~ 484 (805)
T PLN02724 405 EKLASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIIS 484 (805)
T ss_pred HHHHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHH
Confidence 6677888999999987641 267999998 899999999999999
Q ss_pred HH
Q 014631 413 FC 414 (421)
Q Consensus 413 ~~ 414 (421)
..
T Consensus 485 ~~ 486 (805)
T PLN02724 485 SF 486 (805)
T ss_pred Hh
Confidence 65
No 236
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=9.7e-22 Score=187.33 Aligned_cols=227 Identities=15% Similarity=0.128 Sum_probs=161.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~ 162 (421)
....|++.++++.+ .+..++++||++|+..++..++++||+|+++.+.|.+.. ..+...|++++.++.
T Consensus 65 ~~~~Le~~lA~leg--------~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 65 TTDVFEKRIAALEG--------GIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred hHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 35789999999873 357788999999999999888999999999999997643 345668988888864
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
.|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+. +....++ .++
T Consensus 137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl-~~g- 200 (431)
T PRK08248 137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI-EHG- 200 (431)
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-HcC-
Confidence 3789999999889999999999999999966 67889999999999999999863 2122222 223
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchh---------------------H----HHH-HHHHhhh-cccccCCc
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ---------------------E----LRI-VDSIKGY-LNISSGPA 295 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~---------------------~----~~~-~~~~~~~-~~~~~~~~ 295 (421)
..+++.|++|.++++|.++|++++...+.... . +.. .+..... .......+
T Consensus 201 --aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 278 (431)
T PRK08248 201 --ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS 278 (431)
T ss_pred --CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence 23888999999999999999988753321100 0 000 0111011 11223444
Q ss_pred hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+.....+..-|+ -+..+.++..++...+.+.|+++|++..+..|
T Consensus 279 p~~a~l~~rgl~-----tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 322 (431)
T PRK08248 279 PFNSFLLLQGLE-----TLHLRMERHSENALAVAKFLEEHEAVEWVSYP 322 (431)
T ss_pred HHHHHHHhcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 444444433333 25666778888999999999998876534343
No 237
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=8.4e-22 Score=188.16 Aligned_cols=159 Identities=23% Similarity=0.181 Sum_probs=129.6
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~ 161 (421)
....+|++.+|++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+.. ..+...|++++.++
T Consensus 57 p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~ 128 (418)
T TIGR01326 57 PTTDVLEQRIAALEG--------GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVD 128 (418)
T ss_pred hhHHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEEC
Confidence 335799999999973 246788999999999999988999999999999997643 34567898888876
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
. .|++++++.+++++++|++.+|+||+|.+. ++++|.++|+++|+++|+|++|+... ...++ .
T Consensus 129 ~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~---dl~~I~~la~~~~i~livD~t~~~~~----~~~~l-~-- 191 (418)
T TIGR01326 129 P-------DDPEEFEKAIDENTKAVFAETIGNPAINVP---DIEAIAEVAHAHGVPLIVDNTFATPY----LCRPI-D-- 191 (418)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCCCeec---CHHHHHHHHHHcCCEEEEECCCchhh----cCCch-h--
Confidence 3 178999999988899999999999999995 48899999999999999999997531 11111 1
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
.+..+++.|+||.++++|.|+|+++++.
T Consensus 192 -~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 192 -HGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred -cCCeEEEECccccccCCccceEEEEEec
Confidence 2245889999999999999999999864
No 238
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=9.4e-22 Score=185.29 Aligned_cols=282 Identities=16% Similarity=0.152 Sum_probs=190.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~ 163 (421)
..+|++.++++++ . ++++++++++.+++.++. ++++||+|+++++.|.++.. .+...|++++.++.
T Consensus 49 ~~~le~~la~l~g------~--~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 118 (378)
T TIGR01329 49 RTALESLLAKLDK------A--DRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT- 118 (378)
T ss_pred HHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence 4677777777762 2 466667777789998776 67999999999999987654 34557999888764
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
.|++++++.++++++++++++|+||+|.+. ++++|+++|+++|+++|+|++|.... ...++ .++.
T Consensus 119 ------~d~~~le~~i~~~tklv~le~psnptg~v~---dl~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~- 183 (378)
T TIGR01329 119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIV---DIRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGA- 183 (378)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCCeee---cHHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCC-
Confidence 278999999988999999999999999995 59999999999999999999985422 12233 2232
Q ss_pred CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
.+++.|++|.++.+ +...|++++++ +++.+++..... ...+.++.....+...+ ..+..+.++.
T Consensus 184 --Di~v~S~tK~l~G~~~~~~G~v~~~~-------~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-----~tl~~R~e~~ 249 (378)
T TIGR01329 184 --DIVYHSATKFLAGHSDVMAGVLAVKG-------EEIAKKVYFLQNSTGSGLAPFDCWLLLRGI-----KTLAIRIEKQ 249 (378)
T ss_pred --cEEEEecceeccCCccceeEEEEeCc-------HHHHHHHHHHHHhcCCcCCHHHHHHHHccC-----CCHHHHHHHH
Confidence 28889999987654 46789998854 234455554433 22234444433322222 3356667777
Q ss_pred HHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631 322 RDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 385 (421)
.++...+.+.|+++|.+..+..|. .+..+.+.+.. .....+++..| +..++.++-|..
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-----~~~~~~~~~~L-~~~~i~~s~G~~ 323 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-----VALSKRLVEAT-KLFSITVSFGSV 323 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHHhC-cCcccccCCCCC
Confidence 788888888888776543222221 12344445521 11245676665 777877777654
Q ss_pred CC----------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 386 VG----------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 386 ~~----------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
.. . ++.+|+|++.. +.+.+++.|.+++.+
T Consensus 324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 21 0 35799999853 566667777777764
No 239
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=6.9e-22 Score=174.83 Aligned_cols=315 Identities=17% Similarity=0.205 Sum_probs=212.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+.|++.++|.++-..+ ...|+..+....+++.+++.++ .+.++|+++||+++.+++.+.++||+.|++..
T Consensus 11 g~~~~m~eam~~a~~~~-~~~YG~D~~~~~~e~~~ae~~g--------~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~ 81 (342)
T COG2008 11 GPTPEMREALAAANAVG-DDVYGEDPTTNALEQRIAELFG--------KEAALFVPSGTQANQLALAAHCQPGESVICHE 81 (342)
T ss_pred CCCHHHHHHHHhccccC-CCCCCCCHHHHHHHHHHHHHhC--------CceEEEecCccHHHHHHHHHhcCCCCeEEEec
Confidence 56789999998875322 3479888777888888888873 27899999999999999999999999999999
Q ss_pred CCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631 141 PGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212 (421)
Q Consensus 141 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~ 212 (421)
-+|.... .....++ ....++..+..+..+++|+++..+++ .+..+++.+.+|..|+++|.+++++|.++|+
T Consensus 82 ~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k 160 (342)
T COG2008 82 TAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCK 160 (342)
T ss_pred cccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHH
Confidence 8886542 2223333 23344555556678999999997653 2455666666668899999999999999999
Q ss_pred hcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc
Q 014631 213 KLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI 290 (421)
Q Consensus 213 ~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
++|+.|+.|.+--... ..| ++...+...-.+++ .++||..+.+ +|.++..+ .++++++...+..
T Consensus 161 ~~~l~LHmDGAR~~nA~valg---~~~~~~~~~~D~v~-~~~tK~g~~~---~gAiv~gn-------~~~~~~a~~~rK~ 226 (342)
T COG2008 161 EHGLPLHMDGARLANALVALG---VALKTIKSYVDSVS-FCLTKGGGAP---VGAIVFGN-------RDFAKRARRWRKR 226 (342)
T ss_pred HhCCceeechHHHHHHHHHcC---CCHHHHHhhCCEEE-EecccCCcce---eeeEEEcC-------HHHHHHHHHHHHH
Confidence 9999999998853322 222 23333332223344 4689995555 48877754 4566666554322
Q ss_pred c---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHH
Q 014631 291 S---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDME 367 (421)
Q Consensus 291 ~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (421)
. .....+..+....+|++ ........+-+.+...+.+.|...||+. +..|..++.+++.++...
T Consensus 227 ~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~-~~~~~~tN~vf~~l~~~~--------- 293 (342)
T COG2008 227 AGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVK-LAFPVETNMVFVRLPESA--------- 293 (342)
T ss_pred hcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCce-eccCCcccEEEEECChHH---------
Confidence 1 12233444444455543 3344445566667888999999888998 446666788888887431
Q ss_pred HHHHHHhhcCeeEEeCCCCCCC-CeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 368 FALQLAKEESVIVLPGMAVGMK-NWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 368 ~~~~ll~~~gv~v~~g~~~~~~-~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
...+ +..|.....|..-... ..+|+..+ ++++++++++..+++++
T Consensus 294 -i~~l-~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 294 -IEAL-RLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -HHHH-HhhchhheeeeeccCCCceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 1222 2233333332221112 47899887 88999999999998764
No 240
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.91 E-value=4.6e-21 Score=181.52 Aligned_cols=338 Identities=12% Similarity=0.106 Sum_probs=218.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||..|....+.+ ..+|.+.+++.+++.+... .+ ...+.+.+..+++++.+.. ..+.++++++|++|
T Consensus 34 dG~~~lD~~sg~~~~~lG-h~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGseA 105 (395)
T PRK03715 34 NGKRYLDFIQGWAVNCLG-HCNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAEA 105 (395)
T ss_pred CCCEEEECCcChhhccCC-CCCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHHH
Confidence 588999998875444343 3479999999999876321 12 2234678888899986532 24689999999999
Q ss_pred HHHHHHHhc------CCC-CeEEEcCCCCcchHHHHhhc-CceeE---eeeccCCCC--ccCCHHHHHhhhccCceEEEE
Q 014631 122 IQVILTVLA------RPG-ANILLPKPGFPLYEANARHT-RLEIR---HFDLLPEKG--WEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 122 l~~~~~~l~------~~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~ 188 (421)
+..+++... ++| .+|+..+.+|++....+... |.... +.|..+.-. .-.|++++++.+.+++.++++
T Consensus 106 ~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~ 185 (395)
T PRK03715 106 NEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVML 185 (395)
T ss_pred HHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEE
Confidence 999998774 134 57888899998875444332 32111 111110000 013788998888766666655
Q ss_pred eCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 189 VNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 189 ~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
...++..|... |++.+++|.++|++||+++|+||+|+++.+.|..+. ...++...+ +.+++|.++ .|+++|.++
T Consensus 186 Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD---i~t~gK~lg-~G~p~~av~ 260 (395)
T PRK03715 186 EPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD---IMTLGKGIG-GGVPLAALL 260 (395)
T ss_pred eCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc---eeeehhhhh-CCcceEEEE
Confidence 54466777764 688899999999999999999999998877776432 122222222 347889975 579999998
Q ss_pred eeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---CCccccCC
Q 014631 268 TSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI---PCITCPRK 343 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~ 343 (421)
+++ ++.. +... ...+.+.+++..+++.++|+...+ ++..++.+++.+++.+.|+++ .++..+
T Consensus 261 ~~~--------~i~~-~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-- 326 (395)
T PRK03715 261 AKA--------EVAV-FEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-- 326 (395)
T ss_pred Ecc--------cccc-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE--
Confidence 853 2321 2111 123446778888888888865322 234555556666666666542 134312
Q ss_pred CCceeEEEEecCcccccCCCChHHHHHHHHhhc---CeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEE---SVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
...|.+..+.+... ....+ ...+.+. ||.+.+.. .+.+|++++ .+++++++++++|.++++++
T Consensus 327 rG~Glm~~i~l~~~------~~~~~-~~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 327 RGEGLLRALLLGKD------IGPQI-VEKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EcceeEEEEEecCc------hHHHH-HHHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 23366777777531 11222 2333445 99986532 368999998 79999999999999998764
No 241
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.91 E-value=7e-21 Score=181.71 Aligned_cols=334 Identities=15% Similarity=0.069 Sum_probs=206.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHH-hcCCC----CC-CCCCCCCHHHHH----HHHHHHhhhCCCCCCCCcEE
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAV-RSAEF----DC-YSPSVGILPARR----AIADYLNSELPCKLSPDDVY 113 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~-~~~~~----~~-y~~~~g~~~l~~----~ia~~l~~~~~~~~~~~~i~ 113 (421)
.+.+++-..+ -..+|.+++++...+ .+... .+ |+..+.+.+|++ .++++++ . ...++
T Consensus 28 ~~~~~l~~se------n~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g------~-~~alv 94 (416)
T PRK13034 28 QDHLELIASE------NFTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFG------C-DYANV 94 (416)
T ss_pred hcCeeecccc------cCCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhC------C-CceEE
Confidence 4556665443 145799999998885 33211 11 111233678887 7777763 1 23335
Q ss_pred EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhh--cCcee--EeeeccCCCCccCCHHHHHhhhcc-CceEEE
Q 014631 114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLY-EANARH--TRLEI--RHFDLLPEKGWEVDLDGLEALADE-NTVAMV 187 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~--~g~~~--~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~ 187 (421)
++++|+.|+..++.++++|||+|+++..+|.+. ...++. .+... ..+++++. .+.+|++++++.+.. ++++|+
T Consensus 95 ~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~d~~~le~~l~~~~~klVi 173 (416)
T PRK13034 95 QPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRL-TGLIDYDEVEELAKEHKPKLII 173 (416)
T ss_pred ecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEcccccc-cCCcCHHHHHHHHhhcCCeEEE
Confidence 568889999999999999999999999999762 222221 12221 23444322 345899999987743 567776
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+..+. +|.. .++.+|.++|++||+++|+|++|+...+.... ....++ .-.++++|+||+++.+. .|+++
T Consensus 174 ~~~~~--~g~~---~dl~~l~~la~~~g~~livD~Aha~G~~~~g~--~~~~~~--~~Di~~~s~~K~l~g~~--GG~v~ 242 (416)
T PRK13034 174 AGFSA--YPRE---LDFARFREIADEVGALLMVDMAHIAGLVAAGE--HPNPFP--HAHVVTTTTHKTLRGPR--GGMIL 242 (416)
T ss_pred ECCCc--cccc---cCHHHHHHHHHHcCCEEEEeCcccccCcccCC--CCCCCC--CceEEEEeCcccCCCCC--CeEEE
Confidence 55554 4555 56888888999999999999999876543211 111111 12378899999974332 37777
Q ss_pred eeCCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-
Q 014631 268 TSDPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP- 344 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~- 344 (421)
+++ +.+.+.++..... .+++++....++...+.........+.++++.++.+++++.|.+. |+.+. .+
T Consensus 243 ~~~-------~~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~-~~~ 313 (416)
T PRK13034 243 TND-------EEIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLV-SGG 313 (416)
T ss_pred ECc-------HHHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEec-cCC
Confidence 653 2344444433221 122333333333323322112233466789999999999999987 88743 32
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------CCCCCCeEEEEec------CCHHHHHHHHHHHHH
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------AVGMKNWLRITFA------IEPSALEEGLGRIKA 412 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~~~~iRi~~~------~~~e~l~~~~~~l~~ 412 (421)
..+...++.+.... .....+...|+++||.+.+-. ....+..+|++++ ++++|++++++.|.+
T Consensus 314 ~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~~~~~~t~~~~~~~di~~l~~~l~~ 388 (416)
T PRK13034 314 TDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRIGTPAGTTRGFGEAEFREIANWILD 388 (416)
T ss_pred CCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEeCcHHHHhCCCCHHHHHHHHHHHHH
Confidence 34566666665421 133344345578899997521 1222567999975 458999999999998
Q ss_pred HHHH
Q 014631 413 FCQR 416 (421)
Q Consensus 413 ~~~~ 416 (421)
++.+
T Consensus 389 ~~~~ 392 (416)
T PRK13034 389 VLDD 392 (416)
T ss_pred HHhc
Confidence 8764
No 242
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=3.3e-21 Score=182.26 Aligned_cols=315 Identities=13% Similarity=0.111 Sum_probs=203.6
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCC
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKP 141 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p 141 (421)
.+.-.+++.+.+..+.. .+++ ...+|++.++++++ . +.+++++|+++|+.+++.++ +++||+|+++++
T Consensus 13 ~~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~g------~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~ 81 (379)
T PRK11658 13 GDEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLTG------N--QHAIAVSSATAGMHITLMALGIGPGDEVITPSL 81 (379)
T ss_pred CHHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHhC------C--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCC
Confidence 45567888888776432 3333 36899999999984 2 36788999999999999998 799999999999
Q ss_pred CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
+|.++...+...|++++.+++++ +++.+|++++++.+++++++|+ |+|++|.. .++++|.++|+++|+++|+|
T Consensus 82 ~~~~~~~~~~~~G~~~v~vd~~~-~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~---~d~~~i~~~a~~~gi~vi~D 154 (379)
T PRK11658 82 TWVSTLNMIVLLGATPVMVDVDR-DTLMVTPEAIEAAITPRTKAII---PVHYAGAP---ADLDAIRAIGERYGIPVIED 154 (379)
T ss_pred cHHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhcccCCeEEE---EeCCCCCc---CCHHHHHHHHHHcCCeEEEE
Confidence 99999888999999999999864 3467899999999988888876 66679988 45788999999999999999
Q ss_pred ccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc---------
Q 014631 222 EVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS--------- 291 (421)
Q Consensus 222 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 291 (421)
++|+... +.|. .+.. .. +.+.||++...+++.+.|+++.++ +++.++++......
T Consensus 155 ~a~a~g~~~~~~---~~g~---~g--~~~~Sf~~~K~l~~g~GG~v~~~~-------~~~~~~~~~~~~~G~~~~~~~~~ 219 (379)
T PRK11658 155 AAHAVGTYYKGR---HIGA---RG--TAIFSFHAIKNITCAEGGLVVTDD-------DELADRLRSLKFHGLGVDAFDRQ 219 (379)
T ss_pred CCCccCCeECCe---ecCC---CC--CEEEeCCCCCcCcccCceEEEECC-------HHHHHHHHHHHHcCCCcchhhhh
Confidence 9998532 3221 1111 11 134566655455666788888754 23444444322100
Q ss_pred ------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc----e-eEEEEec
Q 014631 292 ------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG----S-MFVMVKL 354 (421)
Q Consensus 292 ------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~----~-~~~~~~~ 354 (421)
.+.+. -...+.+++.......+++..++.+++.+.+.+.|++++... +..|.. + ..+.+.+
T Consensus 220 ~~~~~~~~~~~~~G~n~-~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~ 297 (379)
T PRK11658 220 TQGRAPQAEVLTPGYKY-NLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFIIRV 297 (379)
T ss_pred cccCCCcceeecccccc-CcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEEEE
Confidence 00000 000111222211235577778888888888899998875433 212221 2 1222334
Q ss_pred CcccccCCCChHHHHHHHHhhcCeeEEeCCC-------CC----C----------CCeEEEEec--CCHHHHHHHHHHHH
Q 014631 355 NLSLLEGISDDMEFALQLAKEESVIVLPGMA-------VG----M----------KNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~----~----------~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
+.... ..+..++... |+++||.+..... |. . ...+-+-++ .++++++.+++.|+
T Consensus 298 ~~~~~--~~~r~~~~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i~ 374 (379)
T PRK11658 298 DEERC--GISRDALMEA-LKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITALQ 374 (379)
T ss_pred CCccc--cCCHHHHHHH-HHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHH
Confidence 32100 0123455555 4778987653210 00 0 123444443 57899999999999
Q ss_pred HHHH
Q 014631 412 AFCQ 415 (421)
Q Consensus 412 ~~~~ 415 (421)
+++.
T Consensus 375 ~~~~ 378 (379)
T PRK11658 375 QIAG 378 (379)
T ss_pred HHHh
Confidence 8753
No 243
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.91 E-value=3.6e-21 Score=175.57 Aligned_cols=348 Identities=16% Similarity=0.113 Sum_probs=233.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..||||..+....-. -..+|.|.+|+++++.++ ..|+.+ .+++-.+|+++.++++ ..+.|-+++++|+
T Consensus 50 vDGn~YIDy~~~~Gp~il-GH~~p~V~~Av~~~l~~G--~~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGTE 120 (432)
T COG0001 50 VDGNEYIDYVLGWGPLIL-GHAHPAVVEAVQEQLERG--LSFGAP---TELEVELAELLIERVP---SIEKVRFVNSGTE 120 (432)
T ss_pred CCCCEeeehhccCccccc-CCCCHHHHHHHHHHHHhc--CCCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchhH
Confidence 458899999988744322 357888999999999986 357654 3777788888877654 3489999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHh-hcCceeEe--------eeccCC-----CCccCCHHHHHhhhccC--
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEANAR-HTRLEIRH--------FDLLPE-----KGWEVDLDGLEALADEN-- 182 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~--------~~~~~~-----~~~~~d~e~l~~~~~~~-- 182 (421)
|...+++... ..-|+|+..+.+|+++...+. ..|...-. +|.... -.|+ |++.+++++.+.
T Consensus 121 AtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-D~~al~~~~~~~g~ 199 (432)
T COG0001 121 ATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-DLEALEEAFEEYGD 199 (432)
T ss_pred HHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-CHHHHHHHHHHcCC
Confidence 9999987653 123899999999998754443 22211110 110000 0011 889999988653
Q ss_pred ceEEEEeCC--CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 183 TVAMVIVNP--GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 183 ~~~i~~~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
..+.+|+.| .| -|.+. .++.++.|.++|++||+++|.||+..+|...-.+......+.++ +.++.|. ...
T Consensus 200 ~IAaVIvEPv~gn-~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGG 272 (432)
T COG0001 200 DIAAVIVEPVAGN-MGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGG 272 (432)
T ss_pred cEEEEEeccccCC-CCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcC
Confidence 455677777 45 66654 55669999999999999999999999987653334444455544 5588999 578
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcc----cccCCchHHHHHHHHHhhccch--hHHHHHHHHHHHHHHHHHHHhh
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN----ISSGPATFVQGAVPQIFKNTKE--DFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
|+++|.+.++ .++++.+..... .+.+.|+++..|..+.++.... ..+++..+.-.++++-+.+.+.
T Consensus 273 GlP~ga~gGr--------~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~ 344 (432)
T COG0001 273 GLPIGAFGGR--------AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAE 344 (432)
T ss_pred CcceeeeccH--------HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999985 578887765442 3567888999998888875332 2355555555555556666666
Q ss_pred cCCCccccCCCCceeEEEEecCcccc-------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLL-------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG 406 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~ 406 (421)
+. ++.......+++|..+-.+.... .+......++.++ .++||++.|+.+ ...=+|..+++++|++.
T Consensus 345 ~~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~-l~~GV~l~ps~~----ea~flS~ahte~di~~~ 418 (432)
T COG0001 345 RH-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHL-LNRGVYLAPSQF----EAGFLSTAHTEEDIDRT 418 (432)
T ss_pred Hh-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHH-HhCCcccCCccc----cceeeecccCHHHHHHH
Confidence 55 55532234445443322221100 0111133555555 557999998653 34467777999999999
Q ss_pred HHHHHHHHHHhhh
Q 014631 407 LGRIKAFCQRHAK 419 (421)
Q Consensus 407 ~~~l~~~~~~~~~ 419 (421)
++++.++++++..
T Consensus 419 ~~a~~~~~~~~~~ 431 (432)
T COG0001 419 LEAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHHhhc
Confidence 9999999988754
No 244
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.91 E-value=4.8e-22 Score=185.77 Aligned_cols=286 Identities=19% Similarity=0.168 Sum_probs=189.0
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
.+...+|+++++++.+ .+++++++|+++|+.+++. ++++||+|+++.+.|.+....+....... .+..
T Consensus 53 ~p~~~~le~~lA~leg--------~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~-~~~~-- 120 (364)
T PRK07269 53 NPTRAKLEETLAAIES--------ADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG-RFHF-- 120 (364)
T ss_pred CccHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-cEEE--
Confidence 3447899999999973 5689999999999999984 56899999999999976554433211100 0111
Q ss_pred CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
.+..|++++++.+++++++|++++|+||||.+ .++++|+++|+++|+++|+|++|....+ ..++ ....+
T Consensus 121 --~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~---~di~~I~~la~~~gi~vvvD~t~~~~~~----~~pl-~~gaD- 189 (364)
T PRK07269 121 --TYANTEEELIAAIEEDTDIVYIETPTNPLMVE---FDIEKVAKLAHAKGAKVIVDNTFYSPIY----QRPI-ELGAD- 189 (364)
T ss_pred --EecCCHHHHHHhcCcCceEEEEECCCCCCCee---eCHHHHHHHHHHcCCEEEEECCCccccc----CCch-hhCCc-
Confidence 12358899999998899999999999999988 4799999999999999999999754221 1122 22222
Q ss_pred CEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631 245 PVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (421)
+++.|++|.++..|- -.|++++++ +++.+++...... ....+++....+...|+. ++.+.++.+
T Consensus 190 --ivv~S~tK~l~g~~d~~gG~v~~~~-------~~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~r~~~~~ 255 (364)
T PRK07269 190 --IVLHSATKYLSGHNDVLAGVVVTND-------LELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSLRMERST 255 (364)
T ss_pred --EEEecCceeccCCCcccceEEEeCc-------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHHHHHHHH
Confidence 889999999875442 357777654 2455555433322 234566666555555543 677788888
Q ss_pred HHHHHHHHHhhcCCCccccC-CCCceeEEEEecCcccccCCCChHHHHHH---------HHhhcCeeEEeCCCCCC----
Q 014631 323 DTADICYDRIKEIPCITCPR-KPEGSMFVMVKLNLSLLEGISDDMEFALQ---------LAKEESVIVLPGMAVGM---- 388 (421)
Q Consensus 323 ~~~~~~~~~l~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gv~v~~g~~~~~---- 388 (421)
++...+.+.|+++|.+..+. ++.+|++. +.+... .....|+.. +...+++++.|+..++.
T Consensus 256 ~na~~~a~~L~~~p~v~~v~ypg~gg~~s-f~~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~ 329 (364)
T PRK07269 256 ANAQEVVAFLKKSPAVKEVLYTGKGGMIS-FKVADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPA 329 (364)
T ss_pred HHHHHHHHHHHhCCCccEEeCCCcCcEEE-EEECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccccccCCH
Confidence 99999999999998875444 44555444 444311 011223222 22223445555443211
Q ss_pred ---------CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 389 ---------KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 389 ---------~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
++-+|+|++.. +.+.+++.|.++++
T Consensus 330 ~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al~ 363 (364)
T PRK07269 330 EVRHSYGLTDDLLRLSIGIE--DARDLIADLKQALE 363 (364)
T ss_pred HHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHhc
Confidence 35799999963 55666677766653
No 245
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=3.4e-21 Score=183.49 Aligned_cols=226 Identities=19% Similarity=0.165 Sum_probs=158.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~ 161 (421)
+...+|++.++++.+ .+..+++++|++|+..++.+++++||+|+++.+.|.+....+.. .|.++..++
T Consensus 58 pt~~~Le~~lA~l~g--------~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d 129 (425)
T PRK06084 58 PTNDVLEQRVAALEG--------GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAA 129 (425)
T ss_pred chHHHHHHHHHHHhC--------CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEEC
Confidence 335799999999873 23567788888999999999999999999999999865544432 455555553
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
. .|++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..++ .++
T Consensus 130 ~-------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~g 194 (425)
T PRK06084 130 H-------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPF-EHG 194 (425)
T ss_pred C-------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChh-hcC
Confidence 2 3889999999888999999999999999976 78999999999999999999985321 1122 222
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH----------------------------HHHHh-h-hcccc
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI----------------------------VDSIK-G-YLNIS 291 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~----------------------------~~~~~-~-~~~~~ 291 (421)
. .+++.|++|.++++|.++|.+++.++.... .+. ..... . .....
T Consensus 195 a---Divv~S~tK~l~G~g~~~gG~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g 269 (425)
T PRK06084 195 A---DIVVHSLTKYIGGHGTSIGGIVVDSGKFPW--AEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMG 269 (425)
T ss_pred C---CEEEECchhcccccccceeEEEEeCCccch--hhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcC
Confidence 2 288999999999999999887775321000 000 00000 0 11122
Q ss_pred cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
...++.....+..-|+ -+..+.++.+++...+.+.|+++|.+..+..|
T Consensus 270 ~~l~~~~a~l~lrgl~-----tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP 317 (425)
T PRK06084 270 AALSPFNAFLILQGLE-----TLALRMERHTENALKVARYLQQHPQVAWVKYA 317 (425)
T ss_pred CCCCHHHHHHHHcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 3444454444433343 36677778888999999999998876533333
No 246
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=9.2e-21 Score=179.23 Aligned_cols=312 Identities=18% Similarity=0.240 Sum_probs=194.9
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCC
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKP 141 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p 141 (421)
.+.-.+++.+.+..+.. |+. .++++.+++++.+.+| .+++++++|+++|+.+++..+ +++||+|+++.+
T Consensus 10 ~~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~ 79 (375)
T PRK11706 10 VGTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (375)
T ss_pred CHHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCC
Confidence 34456777777766432 322 2444555554444333 468999999999999887765 689999999999
Q ss_pred CCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 142 GFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 142 ~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
+|.++...+...|++++.++++++ ++.+|++++++.+++++++|+++ |++|.. .++++|.++|+++|+++|+|
T Consensus 80 t~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~---~~~G~~---~~~~~i~~la~~~~i~vIeD 152 (375)
T PRK11706 80 TFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPV---HYAGVA---CEMDTIMALAKKHNLFVVED 152 (375)
T ss_pred CcHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEe---CCCCCc---cCHHHHHHHHHHcCCEEEEE
Confidence 999999999999999999988643 46799999999998888988765 468877 45789999999999999999
Q ss_pred ccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc--------
Q 014631 222 EVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-------- 290 (421)
Q Consensus 222 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 290 (421)
++|+.+. +.+. ++..+. .+.+.||+ |.+ .+|.+.+++..+ +++.+++......
T Consensus 153 ~a~a~g~~~~~~---~~g~~~----~~~~~Sf~~~K~l-~~g~gG~~~~~~--------~~~~~~~~~~~~~g~~~~~~~ 216 (375)
T PRK11706 153 AAQGVMSTYKGR---ALGTIG----HIGCFSFHETKNY-TAGEGGALLIND--------PALIERAEIIREKGTNRSQFF 216 (375)
T ss_pred CccccccccCCe---eeecCc----CEEEEeCCCCccc-cccCCeEEEECC--------HHHHHHHHHHHHcCCCcchhh
Confidence 9999865 3332 222221 13445555 996 447666666542 2344443332210
Q ss_pred ----------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC--C-ccccCCCCc----eeEEEEe
Q 014631 291 ----------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP--C-ITCPRKPEG----SMFVMVK 353 (421)
Q Consensus 291 ----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~----~~~~~~~ 353 (421)
..+.+.......++.+. .....+++..++-+++.+.+.+.|++++ + +.....+.+ ..++++.
T Consensus 217 ~~~~~~~~~~~~g~~~~~~~~~aa~~~-~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
T PRK11706 217 RGQVDKYTWVDIGSSYLPSELQAAYLW-AQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK 295 (375)
T ss_pred ccCCCcceeeecccccCcCHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence 01122211111111111 1123356666666777777888887765 2 331212221 2345565
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCCC----------C---C---------CCeEEEEec--CCHHHHHHHHHH
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAV----------G---M---------KNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~---~---------~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
++.. .+..++.. .|.++||.+...... + . ...+-+-+. .+++|++..++.
T Consensus 296 ~~~~-----~~r~~l~~-~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 296 LRDL-----EDRSALIN-FLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT 369 (375)
T ss_pred ECCc-----CCHHHHHH-HHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence 6431 12344544 457789987543210 0 0 123444333 578999999999
Q ss_pred HHHHH
Q 014631 410 IKAFC 414 (421)
Q Consensus 410 l~~~~ 414 (421)
|++++
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 98864
No 247
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.90 E-value=1.5e-20 Score=177.33 Aligned_cols=342 Identities=12% Similarity=0.045 Sum_probs=227.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
++.|+|--.. -...+.+.+++...+.+.... .|+....+.+++....+...+.|| .+..+|-.- +
T Consensus 49 ~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~--a~~anvqp~-S 119 (493)
T PRK13580 49 RSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFG--AEHAYVQPH-S 119 (493)
T ss_pred hcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhC--CCcccccCC-C
Confidence 5667775443 245678888887776653222 344556677888888888888886 444555544 4
Q ss_pred HHHHHHHHHHHhcCC-------------------------------CCeEEEcCCCCcchHHH---HhhcC--ceeEeee
Q 014631 118 CKQAIQVILTVLARP-------------------------------GANILLPKPGFPLYEAN---ARHTR--LEIRHFD 161 (421)
Q Consensus 118 ~~~al~~~~~~l~~~-------------------------------gd~Vl~~~p~y~~~~~~---~~~~g--~~~~~~~ 161 (421)
|+.|+..++.++++| ||+|+..++.+.++... ....| .+...++
T Consensus 120 g~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~ 199 (493)
T PRK13580 120 GADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYG 199 (493)
T ss_pred cHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecc
Confidence 566777788888876 79999987666443211 11122 4566666
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-cccc
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVF 240 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~ 240 (421)
++++ ...+|.+++++.+.++++.++++..+|-++ .. ++++|.++|+++|+++++|++|+.....+..... ....
T Consensus 200 vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~~-~~---dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~ 274 (493)
T PRK13580 200 VDPD-TGLLDYDEIAALAREFKPLILVAGYSAYPR-RV---NFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPV 274 (493)
T ss_pred cCcc-cCccCHHHHHHHHhhcCCEEEEeCccccCC-Cc---CHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCC
Confidence 6543 346999999999998888888888877644 53 5888899999999999999999887665433210 0111
Q ss_pred CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
. ...++++|+||++. |.+.|+++++ +++.+.+.... ...+++.++..++...++.......+.+.++
T Consensus 275 ~--~~D~vtgT~hKaL~--GP~GG~I~~~--------~~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~~~~ef~~y~~ 342 (493)
T PRK13580 275 P--HADIVTTTTHKTLR--GPRGGLVLAK--------KEYADAVDKGCPLVLGGPLPHVMAAKAVALAEARTPEFQKYAQ 342 (493)
T ss_pred C--CCcEEEeCChhhcc--CCCeEEEEec--------HHHHHHHhhCCCcccCCCccHHHHHHHHHHHHHhCccHHHHHH
Confidence 1 12378899999963 3345898885 35666664333 2234555555554444454322233466788
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEE
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLR 393 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iR 393 (421)
++.++.+.+.+.|.+. |+.++.....+..+++.+.... .....+.+.|.+.||.+.+-..+.. ...+|
T Consensus 343 ~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~vn~i~~Ptvp~g~~~~srLR 416 (493)
T PRK13580 343 QVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIVTNRNSIPSDPNGAWYTSGIR 416 (493)
T ss_pred HHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeEEccccCCCCCCCCCCCceEE
Confidence 9999999999999987 8874322345667777775421 1333455567889999986554432 46799
Q ss_pred EEec------CCHHHHHHHHHHHHHHHHHh
Q 014631 394 ITFA------IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 394 i~~~------~~~e~l~~~~~~l~~~~~~~ 417 (421)
|++. .+++|++++++.|.++++..
T Consensus 417 Ig~~A~ttrg~teedi~~iad~l~~~l~~~ 446 (493)
T PRK13580 417 LGTPALTTLGMGSDEMDEVAELIVKVLSNT 446 (493)
T ss_pred eccchhhhcCCCHHHHHHHHHHHHHHHHhh
Confidence 9976 25799999999999888643
No 248
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.90 E-value=3.9e-21 Score=181.66 Aligned_cols=228 Identities=15% Similarity=0.158 Sum_probs=159.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 162 (421)
....|++.++++.+ ....+.+++|++|+.+++.+++++||+|+++.+.|.+.... +...|+++..+..
T Consensus 62 tv~~lE~~la~leg--------~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELEG--------GVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 36799999999973 24578899999999999998999999999999999876665 5778998888743
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
.+|++++++++++++++|++.+|+||++.+++ +++|+++|+++|+++|+|+++..-. -..++ .++.
T Consensus 134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~pl-~~GA 199 (432)
T PRK06702 134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQAF-EHGA 199 (432)
T ss_pred ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCChh-hcCC
Confidence 26889999999999999999999999999954 9999999999999999999985311 01111 2233
Q ss_pred CCCEEEEcccccccC-----CCCceE-----EEEEeeCCCcch--------------hHHHHHH--HHhhhcccccCCch
Q 014631 243 TVPVITLGSMSKRWI-----VPGWRL-----GWLVTSDPSGIL--------------QELRIVD--SIKGYLNISSGPAT 296 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~-----~~G~r~-----G~~~~~~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~~ 296 (421)
+ |++.|+||.++ ++|.++ +|...++..... .++++.. ..........+.++
T Consensus 200 D---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp 276 (432)
T PRK06702 200 N---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP 276 (432)
T ss_pred C---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence 2 88999999544 444443 333221111000 0011111 11112223346777
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+....+...|+. ++.+.++.+++...+.+.|+++|.+..+..|
T Consensus 277 ~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 277 FNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred HHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 777766666654 5566667779999999999988876534343
No 249
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.90 E-value=2.1e-21 Score=183.54 Aligned_cols=326 Identities=15% Similarity=0.087 Sum_probs=210.6
Q ss_pred eeeccCCCCCCCCCCCCcHH-HHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC-CHHHH
Q 014631 46 IIPLGHGDPSAFPCFRTTPV-AADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTA-GCKQA 121 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~-g~~~a 121 (421)
.++|+.|. . ..++. +.+++.+..... . ...+ ..-+.+.|+.++++++ . .++++|++++ |+|.+
T Consensus 13 ~~~f~~Gp-~-----~~~~~~v~~a~~~~~~~~-~-hr~~~f~~~~~~~r~~l~~l~~----~-~~~~~v~~~~gs~T~~ 79 (378)
T PRK03080 13 DPRFSSGP-C-----KKRPGWQLEALADALLGR-S-HRQKPVKALLKRVIEGTRELLS----L-PEGYEVGIVPGSDTGA 79 (378)
T ss_pred CCCcCCCC-c-----CCChHHHHHHHHhhhccc-C-cCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEECCchHHH
Confidence 45676664 2 34455 889988654321 1 1111 1234577777777763 1 1345788775 89999
Q ss_pred HHHHHHHhcCC-CCeEEEcCCCCcch-HH-HHhhcCc-eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631 122 IQVILTVLARP-GANILLPKPGFPLY-EA-NARHTRL-EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN 197 (421)
Q Consensus 122 l~~~~~~l~~~-gd~Vl~~~p~y~~~-~~-~~~~~g~-~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~ 197 (421)
++.++..+.++ ++.|++ ...|..- .. .++..|. +++.++.++ +..+|+++++. ++.+.+++..|.||.
T Consensus 80 ~~~~~~~l~~~~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~--g~~~d~~~i~~-----~~~V~~~h~~t~tG~ 151 (378)
T PRK03080 80 WEMALWSLLGARRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADY--GSLPDLSAVDF-----DRDVVFTWNGTTTGV 151 (378)
T ss_pred HHHHHHhcCCCCcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCC--CCCCCHhhcCC-----CCCEEEEecCCccce
Confidence 99999998875 445544 4455442 32 2356788 888887643 33467666432 556889999999999
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchh
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~ 276 (421)
..| +++|++ +++|+++++|.+++. |....++... .+++.|.+|+++. +| +|++++++
T Consensus 152 ~~p---i~~I~~--~~~g~~~vVDa~qs~----G~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~------ 209 (378)
T PRK03080 152 RVP---VARWIG--ADREGLTICDATSAA----FALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSP------ 209 (378)
T ss_pred ecc---chhhcc--ccCCCeEEEeccccc----ccCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECH------
Confidence 976 666666 788999999999988 4444444443 2788899999765 56 79998863
Q ss_pred HHHHHHHHhhh-----------------------cc-cccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHH
Q 014631 277 ELRIVDSIKGY-----------------------LN-ISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDR 331 (421)
Q Consensus 277 ~~~~~~~~~~~-----------------------~~-~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~ 331 (421)
++.+++... .. ...+++.....++.++|+...+. +++.+.++.+++.+++++.
T Consensus 210 --~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~ 287 (378)
T PRK03080 210 --RAVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDW 287 (378)
T ss_pred --HHHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 233332211 00 11245555565656677654444 6888999999999999999
Q ss_pred hhcCCCccccC-CCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631 332 IKEIPCITCPR-KPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG 406 (421)
Q Consensus 332 l~~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~ 406 (421)
|++++++.... .+. .+....+.++... + . .+.+++..+++ +|+.+..|......+.+|+|++ ++.+|++++
T Consensus 288 l~~~~~~~~~~~~~~~~s~~i~~~~~~~~~-~-~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l 363 (378)
T PRK03080 288 AEKTPWATPLVADPATRSNTSVTLDFVDAQ-A-A-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEAL 363 (378)
T ss_pred HHhCCCcccccCCccccCccEEEEEcCCch-H-H-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHH
Confidence 99886665321 121 2223444454200 0 0 13446666654 5888877653323578999998 899999999
Q ss_pred HHHHHHHHHHhhhc
Q 014631 407 LGRIKAFCQRHAKQ 420 (421)
Q Consensus 407 ~~~l~~~~~~~~~~ 420 (421)
++.|+++++++++.
T Consensus 364 ~~al~~~~~~~~~~ 377 (378)
T PRK03080 364 TPWLDWAFERLKAA 377 (378)
T ss_pred HHHHHHHHHHHhhc
Confidence 99999998887653
No 250
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=1e-20 Score=179.06 Aligned_cols=213 Identities=15% Similarity=0.110 Sum_probs=150.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~ 163 (421)
..++++.+|++.+ .. +.+++ ++|+.++..++. ++++||+|+++++.|.+.. ..+...|++++.++..
T Consensus 56 ~~~le~~lA~l~g------~~-~~v~~-~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~ 126 (390)
T PRK08064 56 REALEDIIAELEG------GT-KGFAF-ASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMT 126 (390)
T ss_pred HHHHHHHHHHHhC------CC-CeEEE-CCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCC
Confidence 5799999999973 33 34554 555778888886 6789999999999998543 4455689988888642
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
|++++++.+++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|..... ..++ .++
T Consensus 127 -------d~~~l~~~l~~~tklV~l~~p~NptG~~~---dl~~I~~la~~~g~~vvvD~a~~~~~~----~~~~-~~g-- 189 (390)
T PRK08064 127 -------NLEEVAQNIKPNTKLFYVETPSNPLLKVT---DIRGVVKLAKAIGCLTFVDNTFLTPLL----QKPL-DLG-- 189 (390)
T ss_pred -------CHHHHHHhcCCCceEEEEECCCCCCcEec---cHHHHHHHHHHcCCEEEEECCCCcccc----cCch-hhC--
Confidence 68899999988999999999999999994 588888999999999999999876431 1122 222
Q ss_pred CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhccccc-CCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-GPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
..+++.|+||.++.+ |...|++++.+ +++.+.+......++ ..++.....+...+ ..+..+.++.
T Consensus 190 -~Divv~S~tK~~~G~~~~laG~~v~~~-------~~~~~~l~~~~~~~g~~~~~~~a~l~~~gl-----~tl~~R~~~~ 256 (390)
T PRK08064 190 -ADVVLHSATKFLAGHSDVLAGLAVVKD-------EELAQKLYFLQNSFGAVLGVQDCWLVLRGL-----KTLHVRLEHS 256 (390)
T ss_pred -CcEEEeecceeccCCccceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHccc-----CcHHHHHHHH
Confidence 237889999998643 45568777653 346666666554322 23333333222222 2355666777
Q ss_pred HHHHHHHHHHhhcCCCcc
Q 014631 322 RDTADICYDRIKEIPCIT 339 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~ 339 (421)
.++...+.+.|+++|.+.
T Consensus 257 ~~~a~~la~~L~~~~~v~ 274 (390)
T PRK08064 257 SETANKIALYLQEHPKVQ 274 (390)
T ss_pred HHHHHHHHHHHhcCCCcc
Confidence 788888888888776543
No 251
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.90 E-value=1.6e-20 Score=176.26 Aligned_cols=284 Identities=14% Similarity=0.137 Sum_probs=188.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~ 163 (421)
...|++.+|++.+ .+++++++|+++|+..++.+++++||+|+++++.|.++... ....|.++..++.
T Consensus 52 ~~~lE~~lA~l~g--------~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~- 122 (377)
T TIGR01324 52 HFALQDAMCELEG--------GAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDP- 122 (377)
T ss_pred HHHHHHHHHHHhC--------CCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECC-
Confidence 4699999999873 35799999999999999999999999999999999876543 3456777666542
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
. +.+++++.+++++++|++.+|+||+|.. .++++|+++|+++|+++|+|++|+.... ..++ .++.
T Consensus 123 -~-----~~e~l~~~i~~~tklV~lesp~Np~g~~---~dl~~I~~la~~~g~~livD~t~a~g~~----~~pl-~~ga- 187 (377)
T TIGR01324 123 -L-----IGEDIATLIQPNTKVLFLEAPSSITFEI---QDIPAIAKAARNPGIVIMIDNTWAAGLL----FKPL-EHGV- 187 (377)
T ss_pred -C-----CHHHHHHhcCCCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCccccc----cCcc-ccCc-
Confidence 1 2378888898899999999999999888 7899999999999999999999987332 1122 2232
Q ss_pred CCEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
.+++.|++|.++.. +...|++++++ +..+.+..... ...+.++.....+...++ -+.-+.++.
T Consensus 188 --Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl~-----tl~~R~~~~ 252 (377)
T TIGR01324 188 --DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGLR-----TLGVRLKQH 252 (377)
T ss_pred --eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhhh-----hHHHHHHHH
Confidence 38899999998754 46678887642 34444443222 223445544444444343 345556777
Q ss_pred HHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631 322 RDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 385 (421)
.++...+.+.|+++|.+.-++.|. .|..+.++++... ......|++.+ +-.++.+.-|..
T Consensus 253 ~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~~~~~~~slG~~ 328 (377)
T TIGR01324 253 QESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-QLFGLGYSWGGY 328 (377)
T ss_pred HHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-CcceEeccCCCc
Confidence 778788888888877664333332 1334445564210 01133444443 433444332221
Q ss_pred C------C-------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 386 V------G-------------MKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 386 ~------~-------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
. . .++.+|+|++.+ +.+.+++.|.++++.
T Consensus 329 ~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 329 ESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFEA 376 (377)
T ss_pred cceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHhc
Confidence 0 0 125699999953 455666666666653
No 252
>PRK05939 hypothetical protein; Provisional
Probab=99.90 E-value=1.7e-20 Score=177.32 Aligned_cols=226 Identities=17% Similarity=0.110 Sum_probs=156.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLP 164 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~ 164 (421)
...|++.++++.+ .+..+++++|+.|+..++.+++++||+|+++++.|.++. ..+...|++++.++.
T Consensus 49 ~~~lE~~la~leg--------~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~-- 118 (397)
T PRK05939 49 TAALEAKITKMEG--------GVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA-- 118 (397)
T ss_pred HHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC--
Confidence 3499999999873 223455556689999999999999999999999997653 345668988888764
Q ss_pred CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
.|+|++++.+++++++|++.+|+||||.+ .++++|+++|+++|+++|+|++|+... ...+. .+ +
T Consensus 119 -----~d~e~l~~~l~~~tklV~vesp~NptG~v---~dl~~I~~la~~~gi~livD~t~a~~~----~~~~~-~~---g 182 (397)
T PRK05939 119 -----TDVQNVAAAIRPNTRMVFVETIANPGTQV---ADLAGIGALCRERGLLYVVDNTMTSPW----LFRPK-DV---G 182 (397)
T ss_pred -----CCHHHHHHhCCCCCeEEEEECCCCCCCCH---HhHHHHHHHHHHcCCEEEEECCccccc----ccCcc-cc---C
Confidence 27899999999999999999999999999 789999999999999999999986421 11111 11 2
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCc-------chhH-------HHHHHHHhhh--cccccCCchHHHHHHHHHhhc
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSG-------ILQE-------LRIVDSIKGY--LNISSGPATFVQGAVPQIFKN 308 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-------~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 308 (421)
..+++.|+||.++..|.++|++++.+... .... ......+... .......++.....+...|+
T Consensus 183 aDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~- 261 (397)
T PRK05939 183 ASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE- 261 (397)
T ss_pred CEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcC-
Confidence 34889999999999999999988743210 0000 0001111111 11222344444443333333
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
-+..+.++..++...+.+.|+++|.+..+..|
T Consensus 262 ----tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP 293 (397)
T PRK05939 262 ----TLALRVDRSCSNALALAQFLEAHPKVARVYYP 293 (397)
T ss_pred ----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 25555666677888999999988776534344
No 253
>PRK06541 hypothetical protein; Provisional
Probab=99.90 E-value=2.6e-20 Score=179.30 Aligned_cols=357 Identities=14% Similarity=0.123 Sum_probs=221.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... ...+|.+.+++.+++++... +.......+....+++.+.+..+ ...+.++++++|++
T Consensus 49 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGse 123 (460)
T PRK06541 49 DRGKRYLDGLAGLFVVQV-GHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTGGSE 123 (460)
T ss_pred CCCCEEEECCccHHhccC-CCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCCcHH
Confidence 358899999888544333 35689999999999986321 11111112334445555544222 22368999999999
Q ss_pred HHHHHHHHhcC-------C-CCeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCCCC---ccCC-----
Q 014631 121 AIQVILTVLAR-------P-GANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPEKG---WEVD----- 171 (421)
Q Consensus 121 al~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~d----- 171 (421)
|+..+++.... + ..+|+....+|++....+... |. .+..+|.+.... ++-+
T Consensus 124 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 203 (460)
T PRK06541 124 AVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFG 203 (460)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHH
Confidence 99999876431 2 368999999999876544322 11 111222111000 1112
Q ss_pred ---HHHHHhhhc---cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
++.+++.+. ++..+.++..| ++++|.+. |.+.+++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus 204 ~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~gv~ 282 (460)
T PRK06541 204 RWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERFGYV 282 (460)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhcCCC
Confidence 356666664 34566677788 88899875 48889999999999999999999998886666543 22223322
Q ss_pred CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
.+++ +++|.++ +|+ ++|+++++ +++++.+.... ..+.+.++++.+++.+.|+...+ ++.
T Consensus 283 PDiv---t~gK~l~-~G~~pigav~~~--------~~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~---~~~ 347 (460)
T PRK06541 283 PDII---TCAKGIT-SGYSPLGAMIAS--------DRLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFER---EGL 347 (460)
T ss_pred CCEE---Eeccccc-CCccceeEEEEc--------HHHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh---ccH
Confidence 2333 5899975 676 99999996 35666554321 12456788888888888765222 234
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCcccc--cCCCCh-----H-HHHHHHHhhcCeeEEeCCCCCC
Q 014631 318 VDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNLSLL--EGISDD-----M-EFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~-----~-~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
.++++++.+++.+.|+++....++ .....|.+..+++..... ...... . ..+...+.++||++.+.. . .
T Consensus 348 ~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~~-~-g 425 (460)
T PRK06541 348 LDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD-R-G 425 (460)
T ss_pred HHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEecC-C-C
Confidence 566667777777777665222111 012335566677642110 000000 1 123334567899998731 1 1
Q ss_pred CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 389 KNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.+.+|++++ .+++++++++++|.+++++..++
T Consensus 426 ~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~~ 459 (460)
T PRK06541 426 DPVVQLAPPLISGQEEFDEIEQILRSVLTEAWAR 459 (460)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 367999998 89999999999999999887665
No 254
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.90 E-value=5.3e-20 Score=176.90 Aligned_cols=356 Identities=15% Similarity=0.128 Sum_probs=212.1
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD-VYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~ 119 (421)
..|.+++||..|...... ...+|.+.+++.+++.+...... ..-..+.+..+|+.+....+....... ++++++|+
T Consensus 36 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGs 112 (442)
T TIGR00709 36 VEGKEYLDFLAGAGTLAL-GHNHPNMKQKILDYLQSGLPLHT--LDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGA 112 (442)
T ss_pred CCCCEEEEccccHhhhcC-CCCCHHHHHHHHHHHHhccCccc--cccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHH
Confidence 458899999888644332 35788999999999986321111 001134555566666543331111234 45568999
Q ss_pred HHHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc----CCH----HH
Q 014631 120 QAIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE----VDL----DG 174 (421)
Q Consensus 120 ~al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~----~d~----e~ 174 (421)
+|+..+++.... .| .+|+....+|++....+..... .+..++.+.... ++ .+. +.
T Consensus 113 EA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (442)
T TIGR00709 113 DAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEY 192 (442)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 999999886531 23 6799999999988655543211 112222211000 00 011 11
Q ss_pred HHhhhc------cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631 175 LEALAD------ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247 (421)
Q Consensus 175 l~~~~~------~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 247 (421)
+++.+. .+..++++...++..|. .+|++.++++.++|++||+++|.||+++++.+.|..+ ....++...+++
T Consensus 193 ~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~PDiv 271 (442)
T TIGR00709 193 FENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AFEHAGIEPDFV 271 (442)
T ss_pred HHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HHHHcCCCCcEE
Confidence 233332 23344444433554554 5788999999999999999999999999998777532 333344333344
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
+++|.++. |+++|++++++ + .+.+... ...+.+.++++++++.++|+...+.. ..++.+++.+
T Consensus 272 ---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~ 335 (442)
T TIGR00709 272 ---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGE 335 (442)
T ss_pred ---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHH
Confidence 37999765 89999999863 2 2332221 22456789999999999987533322 2334445555
Q ss_pred HHHHHhhc----CCCccccCCCCceeEEEEecCcccc-cC----CC---ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLL-EG----IS---DDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~-~~----~~---~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
++.+.|++ .|.+..+ . .-|.+..+++..... .+ .. .....+...+.++||++.+... ..+.+|+
T Consensus 336 ~l~~~L~~l~~~~~~v~~v-r-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~--~~~~l~~ 411 (442)
T TIGR00709 336 RITSFLDDMIKEHPCIGNV-R-GRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR--EGEVFRL 411 (442)
T ss_pred HHHHHHHHHHHhCCCeeee-e-ccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC--CCCEEEE
Confidence 55555543 4433312 2 335667677743210 00 00 0112233345678999976432 2478999
Q ss_pred Eec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 395 TFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.++ .++++++++++++.+++++..++
T Consensus 412 ~Ppl~it~~ei~~~~~~l~~~l~~~~~~ 439 (442)
T TIGR00709 412 LCPITIDQEECEEGISRFKQAVEEALAE 439 (442)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 887 79999999999999999876543
No 255
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.90 E-value=2.7e-21 Score=181.31 Aligned_cols=311 Identities=14% Similarity=0.104 Sum_probs=206.6
Q ss_pred CCcHHHHHHHHHHHhcC-CC--CCCCCC-------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHHHHHHh
Q 014631 61 RTTPVAADAVVDAVRSA-EF--DCYSPS-------VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQVILTVL 129 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~-~~--~~y~~~-------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l 129 (421)
+.|+.|.+++.+.+.+. +. ..|... .-+.+.|+.++++++ . .+++++++|+| +|++++.++..+
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~----~-~~~~~vvf~~gs~T~a~~~~~~~l 83 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLN----I-PDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC----C-CCCceEEEEcCCchHHHHHHHHhc
Confidence 57899999999987431 11 112111 224577777888773 1 25678999988 999999999999
Q ss_pred cC---CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC-HHHHHhhhccCceEEEEeCCCCCcccccCHHHHH
Q 014631 130 AR---PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD-LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQ 205 (421)
Q Consensus 130 ~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 205 (421)
.. +||.|++. +-...+...++..|.+++.++.+.+.++. + ++..+..+++++++|.+++..|.||+.++
T Consensus 84 ~~~~~~~~~i~~g-~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~----- 156 (355)
T cd00611 84 LGDKGTADYVVTG-AWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAPDAAYVHYCSNETIHGVEFD----- 156 (355)
T ss_pred CCCCCeEEEEECC-HHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCCCCCEEEEeCCcccccEEcc-----
Confidence 77 45555442 11122234678889998888864332221 3 33333445678999999999999999843
Q ss_pred HHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631 206 KIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285 (421)
Q Consensus 206 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 285 (421)
++++.||+++++|.+++. |....++..++ +.+.|.+|.||.+| +|++++++ ++.+++.
T Consensus 157 ---~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~--------~~~~~~~ 214 (355)
T cd00611 157 ---EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRK--------DLLGKAR 214 (355)
T ss_pred ---eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECH--------HHHhhcc
Confidence 344459999999999988 44444544433 45566899988777 78988863 2332222
Q ss_pred h-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCC--cee
Q 014631 286 G-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCIT-CPRKPE--GSM 348 (421)
Q Consensus 286 ~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~--~~~ 348 (421)
. .....++++.....++.++++...+. +++.+.++.+++.+++++.|+++||+. ....+. .+.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~ 294 (355)
T cd00611 215 KITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRM 294 (355)
T ss_pred cCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcCce
Confidence 1 11123578888888888888865555 689999999999999999999998863 121111 112
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.+.+.++.. ....++.. .+.+.|+...+|.. ..+.+|+|+. ++.+|++++++.|+++
T Consensus 295 vvsf~~~~~-----~l~~~~~~-~~~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 295 NVPFRLGKE-----ELEKEFLK-EAEAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred EEEEEcCCh-----hhhHHHHH-HHHHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 244444321 01233333 44668998666654 2478999998 7999999999999884
No 256
>PLN02509 cystathionine beta-lyase
Probab=99.89 E-value=2.1e-20 Score=178.33 Aligned_cols=228 Identities=18% Similarity=0.172 Sum_probs=156.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCc
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRL 155 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 155 (421)
..|... |.+ .++++.+++.+..| .+..++++++++++..++ .++++||+|+++.+.|.++.. .....|+
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~leg----~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLDK----ADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHhC----CCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 356543 433 45555555555433 456677778888987766 467899999999999998763 3456788
Q ss_pred eeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 156 EIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 156 ~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
+++.++. .|++++++.+++++++|++++|+||+|.+ .++++|+++|+++|+++|+|++|+.... +.
T Consensus 198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i---~Dl~~I~~lAk~~g~~lIVD~A~a~~~~-~~--- 263 (464)
T PLN02509 198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQI---SDIRKIAEMAHAQGALVLVDNSIMSPVL-SR--- 263 (464)
T ss_pred EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCH---HHHHHHHHHHHHcCCEEEEECCcccccc-CC---
Confidence 8877652 36899999998899999999999999998 8899999999999999999999875432 11
Q ss_pred cccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhH
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
++ ..+. .+++.|++|.++.+| .-.|++++.++ .+.+.+...... ....++.....+...| +.
T Consensus 264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-----~t 327 (464)
T PLN02509 264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGI-----KT 327 (464)
T ss_pred hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhh-----hh
Confidence 22 1222 388899999977644 33577776432 233333222221 1233444444433333 33
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+..+.++.++++..+.+.|+++|.+.-+.+|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6777888889999999999998877534444
No 257
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.89 E-value=3e-20 Score=176.42 Aligned_cols=312 Identities=17% Similarity=0.152 Sum_probs=203.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK 140 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~ 140 (421)
..+.-++++.+.+..+. |.......++|++++++++. ++.++++|+++|+..++.++ +++||+|+++.
T Consensus 8 ~~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g~--------~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~ 76 (380)
T TIGR03588 8 IDQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVGA--------KYAVAFNSATSALHIACLALGVGPGDRVWTTP 76 (380)
T ss_pred CCHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHCC--------CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCC
Confidence 34556778888877643 22234468999999999842 34566778999999999998 78999999999
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
++|.++...+...|++++.++++++ .+.+|++++++.++ +++++|+++ |++|.. .++++|.++|++||+
T Consensus 77 ~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~---~~~~~i~~l~~~~~~ 149 (380)
T TIGR03588 77 ITFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKS---VDMQAIAALAKKHGL 149 (380)
T ss_pred cchHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCcc---CCHHHHHHHHHHcCC
Confidence 9999999999999999999998653 46789999999987 678877754 468877 458899999999999
Q ss_pred EEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc--
Q 014631 217 MVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-- 291 (421)
Q Consensus 217 ~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 291 (421)
++|+|++|+.+. +.+. ++.... . ..+.+.|++ |.++.+ ..|+++..+ +++.++++......
T Consensus 150 ~lI~D~a~a~g~~~~~~---~~g~~~-~-~d~~~~S~~~~K~~~~~--~GG~v~~~~-------~~~~~~~~~~~~~g~~ 215 (380)
T TIGR03588 150 KIIEDASHALGAEYGGK---PVGNCR-Y-ADATVFSFHPVKIITTA--EGGAVTTND-------EELAERMRLLRSHGIT 215 (380)
T ss_pred EEEEECCCcccCccCCE---eCCCcc-c-cceEEEecCCCCccccc--CceEEEECC-------HHHHHHHHHHHHCCCC
Confidence 999999998743 3332 121200 1 126666776 776443 457777754 23445443321100
Q ss_pred ------------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-
Q 014631 292 ------------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG- 346 (421)
Q Consensus 292 ------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~- 346 (421)
...+.+....+..-| ..+++..++-+++.+++.+.|.++|++.....+.+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~ 290 (380)
T TIGR03588 216 KDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGS 290 (380)
T ss_pred CCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCC
Confidence 000111111111112 33677777888888999999998877662222211
Q ss_pred --e-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC----------CCeEEEEec--CCH
Q 014631 347 --S-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM----------KNWLRITFA--IEP 400 (421)
Q Consensus 347 --~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~iRi~~~--~~~ 400 (421)
+ ....+.++.. ...+..++... |+++||.+...... .. ...+++.++ .++
T Consensus 291 ~~~~~~~~i~~~~~---~~~~r~~l~~~-L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~ 366 (380)
T TIGR03588 291 KSAWHLYPILLDQE---FGCTRKEVFEA-LRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTL 366 (380)
T ss_pred EeEEEEEEEEECCc---CCCCHHHHHHH-HHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCCH
Confidence 1 2223334321 01134455554 57889988643311 00 145777766 689
Q ss_pred HHHHHHHHHHHHHH
Q 014631 401 SALEEGLGRIKAFC 414 (421)
Q Consensus 401 e~l~~~~~~l~~~~ 414 (421)
++++.+++.|++++
T Consensus 367 ~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 367 EQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHhC
Confidence 99999999998764
No 258
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=2.5e-20 Score=178.87 Aligned_cols=345 Identities=14% Similarity=0.141 Sum_probs=216.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|.+++|+..|.-.... ...+|.+.+++.+++.+... ..|.. .+.+..+++.+....+ ...+.++++++|+
T Consensus 79 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~ql~~l~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 151 (459)
T PRK11522 79 TQGQEFIDCLGGFGIFNV-GHRNPVVVSAVQNQLAKQPLHSQELL----DPLRAMLAKTLAALTP--GKLKYSFFCNSGT 151 (459)
T ss_pred CCCCEEEECCcCHHhhhc-CCCCHHHHHHHHHHHhhCcccccccC----CHHHHHHHHHHHHhCC--CCCCEEEEeCCch
Confidence 347888999777433222 35789999999999986322 11212 3444455555544332 2236899999999
Q ss_pred HHHHHHHHHhc----CCC-CeEEEcCCCCcchHHHHhhcCcee-Ee---eeccCCC---CccCCHHHHHhhhcc-----C
Q 014631 120 QAIQVILTVLA----RPG-ANILLPKPGFPLYEANARHTRLEI-RH---FDLLPEK---GWEVDLDGLEALADE-----N 182 (421)
Q Consensus 120 ~al~~~~~~l~----~~g-d~Vl~~~p~y~~~~~~~~~~g~~~-~~---~~~~~~~---~~~~d~e~l~~~~~~-----~ 182 (421)
+|+..+++... ++| .+|+....+|++....+....... .. .|..+.- .+ .|.+++++.+.. +
T Consensus 152 EAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~~~~ 230 (459)
T PRK11522 152 ESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPF-GNIEAMRTALSECKKTGD 230 (459)
T ss_pred HHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCC-CCHHHHHHHHHHhhccCC
Confidence 99999988653 123 468889999999865544332111 10 1111100 01 156777776642 2
Q ss_pred ceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 183 TVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 183 ~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
..+.+++.| +...|.+ .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++ +++|.++ .|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~lg-gG 305 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKALG-GG 305 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhhh-CC
Confidence 334556666 5566775 466789999999999999999999999887666532 222333222233 7899964 56
Q ss_pred -ceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc--
Q 014631 261 -WRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-- 334 (421)
Q Consensus 261 -~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-- 334 (421)
+++|.++++ +++.+.+... . ..+.+.++++.+++.+.|+...++ +..++.+++.+++.+.|++
T Consensus 306 ~~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~ 374 (459)
T PRK11522 306 VMPIGATIAT--------EEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLA 374 (459)
T ss_pred CccceeEEEc--------HHHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHH
Confidence 689999985 3565655321 1 234466889998888888763322 2344555555566655554
Q ss_pred --CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631 335 --IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 335 --~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
+|. +..+ . ..|.+..+++.... ....+... +.++||.+.+... ..+.+|++++ .+++++++++++
T Consensus 375 ~~~~~~i~~V-r-G~Gl~~giel~~~~-----~~~~i~~~-l~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~ 444 (459)
T PRK11522 375 REYPDLVQEA-R-GKGMLMAIEFVDNE-----IGYNFASE-MFRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKA 444 (459)
T ss_pred HhCCCceeeE-E-eceeEEEEEecCch-----HHHHHHHH-HHHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHH
Confidence 332 2212 1 23667777775321 13345554 4668999976421 2478999987 799999999999
Q ss_pred HHHHHHHhhh
Q 014631 410 IKAFCQRHAK 419 (421)
Q Consensus 410 l~~~~~~~~~ 419 (421)
|.++++++.+
T Consensus 445 l~~~l~~~~~ 454 (459)
T PRK11522 445 ARKALAAMRV 454 (459)
T ss_pred HHHHHHHHHH
Confidence 9999987654
No 259
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.89 E-value=3.1e-20 Score=176.18 Aligned_cols=339 Identities=15% Similarity=0.063 Sum_probs=222.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc--------
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA-------- 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~-------- 130 (421)
+..+.+.+++...+... ..++.......++++.+.+|+.+.+|.+...+++.+ |+|+|+|++.++.+..
T Consensus 52 ~~~p~~~~~~~~~l~~~-~~np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKN-MIDKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcC-CCCcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 44567888888888642 122222333458888888888887774311145544 8999999998875542
Q ss_pred CCC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHH
Q 014631 131 RPG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQ 205 (421)
Q Consensus 131 ~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~ 205 (421)
+.| ..|++++..|+++...++..|++++.+|+++ +++.+|+++|++.+++++.+|+++.++|.||.+ ++++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~i---dpi~ 206 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEY---EDVK 206 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCccc---CCHH
Confidence 112 3799999999999999999999999999865 345689999999999899999999999999999 6689
Q ss_pred HHHHHHHhc------CcEEEEccccccccc---CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631 206 KIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 206 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 276 (421)
+|+++|+++ |+++++|.+|+++.. .+.....+. .. .-.-+..|.||++ .....+|+++++++.
T Consensus 207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~-~~--~~DSis~s~HK~~-~~P~g~G~l~~r~~~---- 278 (431)
T TIGR01788 207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFR-LP--RVKSINVSGHKYG-LVYPGVGWVIWRDEE---- 278 (431)
T ss_pred HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcC-CC--CceEEEECchhcc-CCCCCcEEEEEeChH----
Confidence 999999999 999999999996431 122222222 11 1113455899984 334448999987532
Q ss_pred HHHHHHHHhhh---c-----ccccCCchH--HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-C
Q 014631 277 ELRIVDSIKGY---L-----NISSGPATF--VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-E 345 (421)
Q Consensus 277 ~~~~~~~~~~~---~-----~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~ 345 (421)
.+.+.+... . ..+...+.. ........|......++.++.++..++.+++.+.|++.|+++++ .| .
T Consensus 279 --~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~-~~~~ 355 (431)
T TIGR01788 279 --ALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEII-SDGS 355 (431)
T ss_pred --HcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEe-eCCC
Confidence 121222110 0 000011111 11223333433445788999999999999999999999888854 43 2
Q ss_pred ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC---CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA---VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~---~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
....+.++++.... ...+..++.+.| .+.|+.+..... ......+|+++. .+++.++.+++.|++++.++
T Consensus 356 ~~~iV~Fr~~~~~~-~~~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 356 GIPLVAFKLKDDAD-PGYTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred CceEEEEEeCCCCC-CCcCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 23344455542110 011345666654 677987533222 112346899985 68899999999999998764
No 260
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=3.2e-20 Score=179.46 Aligned_cols=338 Identities=10% Similarity=0.032 Sum_probs=214.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHH----HHHHHHHhhhCCCCCCCCcE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPAR----RAIADYLNSELPCKLSPDDV 112 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~----~~ia~~l~~~~~~~~~~~~i 112 (421)
..+.++|-... -..++.+++++...+.+.....++ .......++ +.+++++ | ++++++
T Consensus 33 ~~~~l~l~~se------n~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf----~--a~~~~~ 100 (452)
T PTZ00094 33 QIEGLELIASE------NFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF----G--LDPEEW 100 (452)
T ss_pred HHcCeeEeccc------ccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCcccc
Confidence 36678887554 256788999998887652211222 112233343 4555555 3 566777
Q ss_pred EEc---CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----------cCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 113 YLT---AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----------TRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 113 ~~~---~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----------~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
.++ +||++++..++.++.++||+|++....|.+....+.. .+.++..++++. ++.+|++++++.+
T Consensus 101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l 178 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA 178 (452)
T ss_pred eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence 666 7899999999999999999999988888765443321 112334444443 3569999999988
Q ss_pred cc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccC
Q 014631 180 DE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWI 257 (421)
Q Consensus 180 ~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~ 257 (421)
++ +++.+++. ++.+|... ++++|.++|+++|+++++|++|+.....+... .++. .-.++++|++|+++
T Consensus 179 ~~~~~~lvi~~--~s~~g~~~---di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~ 248 (452)
T PTZ00094 179 KAFRPKLIIAG--ASAYPRDI---DYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR 248 (452)
T ss_pred HHhCCCEEEEe--CCCCCCcc---CHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence 54 55655543 33488885 47788888999999999999998855433211 1211 12377899999864
Q ss_pred CCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 258 VPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+|. .|++++++.. . ..+...+..... ..++++....+++.++++.......++.++++.++.+++.+.|.+.
T Consensus 249 GP~--Gg~l~~~~~~--~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 249 GPR--SGLIFYRKKV--K--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR 322 (452)
T ss_pred CCC--ceEEEEeccc--c--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence 333 4888875321 1 112222222111 1235666677777777765434566778889999999999999876
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE-eCCCCCC----CCeEEEEec--CC----HHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL-PGMAVGM----KNWLRITFA--IE----PSALE 404 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~----~~~iRi~~~--~~----~e~l~ 404 (421)
|+.+..........++.+.... .+... +..+|+++||.+. ++..+.. ++++|++++ ++ ++|++
T Consensus 323 -g~~v~~~~~~~~~~~v~~~~~~----~~~~~-~~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~ 396 (452)
T PTZ00094 323 -GYDLVTGGTDNHLVLVDLRPFG----ITGSK-MEKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK 396 (452)
T ss_pred -CcEEecCCCCCceEeecCCcCC----CCHHH-HHHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence 7763321111233444454321 13344 4455688899994 4443322 478999997 44 89999
Q ss_pred HHHHHHHHHHHH
Q 014631 405 EGLGRIKAFCQR 416 (421)
Q Consensus 405 ~~~~~l~~~~~~ 416 (421)
++++.|.++++.
T Consensus 397 ~l~~~l~~~~~~ 408 (452)
T PTZ00094 397 FVADFLDRAVKL 408 (452)
T ss_pred HHHHHHHHHHHH
Confidence 999999999874
No 261
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.89 E-value=2.8e-20 Score=177.35 Aligned_cols=344 Identities=14% Similarity=0.094 Sum_probs=210.1
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++||..|.-.... ...+|.+.+++.+++.+... ..|.. .+.+..+|+.+.+..+ ...+.++++++|+
T Consensus 72 ~dG~~ylD~~~g~~~~~l-Gh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs 144 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFNV-GHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT 144 (442)
T ss_pred CCCCEEEECCccHHhhhc-CCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 348899999877322222 35789999999999986322 12222 2444445555544332 2236799999999
Q ss_pred HHHHHHHHHhcC----CC-CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCC--ccCCHHHHHhhhc-----cCc
Q 014631 120 QAIQVILTVLAR----PG-ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKG--WEVDLDGLEALAD-----ENT 183 (421)
Q Consensus 120 ~al~~~~~~l~~----~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~--~~~d~e~l~~~~~-----~~~ 183 (421)
+|+..+++.... .| .+|+....+|++....+........ +.|..+.-. .-.|.+.+++.+. .+.
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999999886532 24 6799999999988655543321110 111111000 0025666666553 133
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-
Q 014631 184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG- 260 (421)
Q Consensus 184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G- 260 (421)
.+.++..| +...|... |++.++++.++|++||+++|+||+++++.+.|.. .....++...+++ +++|.++ .|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~lg-~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKALG-GGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhhc-CCc
Confidence 44556666 55667654 6788999999999999999999999988777753 2333333222233 5899964 67
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcCC
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
+++|.++++ +++.+.+... . ..+.+.++++.+++.++|+...++. .++.++.-...++.+.+...+.|
T Consensus 300 ~Pigavv~~--------~~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l~~~~~~~G~~l~~~L~~l~~~~~ 371 (442)
T TIGR03372 300 MPIGATIAT--------EAVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYP 371 (442)
T ss_pred ccceEEEec--------HHHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 689999885 3566666321 1 2345678899999888887533222 23223223333333333333344
Q ss_pred -CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 337 -CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 337 -g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.+..+ ...|.++.+++.... ....+...+ .++||++.+... ..+.+|+.++ .+++++++++++|.++
T Consensus 372 ~~i~~v--RG~Gl~~giel~~~~-----~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 372 DLIIEA--RGKGLLMAIEFRDNE-----IGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAAKDA 441 (442)
T ss_pred CceEEE--ecceEEEEEEeCChH-----HHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHHHHh
Confidence 23212 234677778875421 123455554 668999975321 1468999987 8999999999999886
Q ss_pred H
Q 014631 414 C 414 (421)
Q Consensus 414 ~ 414 (421)
+
T Consensus 442 ~ 442 (442)
T TIGR03372 442 L 442 (442)
T ss_pred C
Confidence 3
No 262
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.89 E-value=1.3e-19 Score=174.15 Aligned_cols=352 Identities=14% Similarity=0.138 Sum_probs=211.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~ 119 (421)
..|+.++||..|.-....+ ..+|.+.+++.+++++... +.......+....+++.+....+ .. .+.++|+++|+
T Consensus 39 ~dG~~ylD~~~g~~~~~lG-H~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SGs 113 (445)
T PRK08593 39 VDGKTYIDLLASASSQNVG-HAPPRVVEAIKAQADKFIH--YTPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSGS 113 (445)
T ss_pred CCCCEEEECCccHHhhcCC-CCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCchH
Confidence 3588999997775433333 4789999999999986422 11111112344444555544332 12 25899999999
Q ss_pred HHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCC--cc-CC-------HH
Q 014631 120 QAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKG--WE-VD-------LD 173 (421)
Q Consensus 120 ~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~d-------~e 173 (421)
+|+..+++... -.| .+|+..+.+|++....+... +. .+..+|.+.... +. .+ ++
T Consensus 114 eA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 193 (445)
T PRK08593 114 DANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLA 193 (445)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHH
Confidence 99999998643 123 57888899999875444321 10 122233211100 00 01 23
Q ss_pred HHHhhhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631 174 GLEALAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247 (421)
Q Consensus 174 ~l~~~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 247 (421)
++++.+. .+..+.++..| ++..|.. .|++.+++|.++|++||+++|+||+++++.+.|..+ ....++....
T Consensus 194 ~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pD-- 270 (445)
T PRK08593 194 PLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPD-- 270 (445)
T ss_pred HHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCC--
Confidence 4444332 13334456666 6667776 688899999999999999999999999887666532 2222332222
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
+.+++|.++ .|+++|+++++ +++++.+.... ..+.+.+++.++++.++|+...+. +..++.+++.+
T Consensus 271 -i~t~gK~l~-~G~p~gav~~~--------~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~ 337 (445)
T PRK08593 271 -LMSFGKSLA-GGMPMSAIVGR--------KEIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKGE 337 (445)
T ss_pred -Eeeeccccc-CCcccEEEEEc--------HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence 337899965 67999999985 35777664322 235578888888888888753322 22333344444
Q ss_pred HHHHHhh----cCCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631 327 ICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-- 397 (421)
Q Consensus 327 ~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-- 397 (421)
++.+.|+ +.|.+..+ . .-|.+..+.+.........+ ...+... +.++||.+.+.. .+.+|++++
T Consensus 338 ~l~~~L~~l~~~~~~v~~v-r-G~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~~----~~~lr~~p~l~ 410 (445)
T PRK08593 338 YARKRFDQWVSKYNFVGDV-R-GYGLSIGIDIVSDKKLKTRDNEAALKICNY-CFEHGVVIIAVA----GNVLRFQPPLV 410 (445)
T ss_pred HHHHHHHHHHhcCCcEEEE-e-ccceEEEEEEecCCCcCCCcHHHHHHHHHH-HHHCCeEEeccC----CCEEEEECCCc
Confidence 4444443 34433312 2 23455555553211000001 2344544 466899986632 368999987
Q ss_pred CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 398 IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.++++++++++++.++++++.+.
T Consensus 411 ~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 411 ITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred cCHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999887543
No 263
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.89 E-value=2.8e-20 Score=173.09 Aligned_cols=316 Identities=15% Similarity=0.097 Sum_probs=214.3
Q ss_pred CcHHHHHHHHHHHhcCCC---CCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHHHHHHhcCCCC
Q 014631 62 TTPVAADAVVDAVRSAEF---DCYSPSVGIL---PARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQVILTVLARPGA 134 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~---~~y~~~~g~~---~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~~~~~l~~~gd 134 (421)
.|..+++++.+.+.+... ..+....--+ ++-+.+.+.+.+.++. .+..++++++| ||++++.++..+..+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 577889999998874221 1222111112 3433444444444442 13456777766 99999999999998999
Q ss_pred eEEEcCCCCcc--hHHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014631 135 NILLPKPGFPL--YEANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 135 ~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~ 210 (421)
++++...+..+ +...++..|. +..+..++..+| .+++++++ ++++++.|.+++..+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 99888777765 3677888898 776665422212 34556554 3457889999999999999864 56
Q ss_pred HHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh----
Q 014631 211 ARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG---- 286 (421)
Q Consensus 211 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---- 286 (421)
++.+++++++|.+++. |.....+..++ +++.|.+|.||.+| +|++++++ ++.+++..
T Consensus 151 ~~~~~~l~iVDavss~----g~~~id~~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~~~~~~~~~~~ 211 (349)
T TIGR01364 151 PDVKNAPLVADMSSNI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTVVIVRK--------DLLGRASRITPS 211 (349)
T ss_pred cccCCCeEEEEccccc----cCccCCHHHcc-----EEEEecccccCCCc--eEEEEECH--------HHHhhcccCCCC
Confidence 6678999999999987 44444444432 77889999998777 78888864 22222211
Q ss_pred ---------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCC-CC-ce-eEEEEe
Q 014631 287 ---------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRK-PE-GS-MFVMVK 353 (421)
Q Consensus 287 ---------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~-~~-~~~~~~ 353 (421)
.....++|+.....++.++|+...+. +++.+.++.+++.+++++.|++++|+..... |. .+ ....+.
T Consensus 212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~ 291 (349)
T TIGR01364 212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFT 291 (349)
T ss_pred cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEe
Confidence 11223588888889998888865556 6999999999999999999999987752311 21 12 233344
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
++... ...++.. .+.++|+++.+|.. ..+.+|+|+. ++.||++.+++.|++++++
T Consensus 292 ~~~~~-----~~~~~~~-~~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 292 LGNEE-----LEKRFLK-EAEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred cCChh-----HhHHHHH-HHHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 44210 1234434 45678998877765 3468999997 7899999999999997765
No 264
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.89 E-value=1.7e-19 Score=172.47 Aligned_cols=331 Identities=15% Similarity=0.136 Sum_probs=204.6
Q ss_pred CCeeeccCCCCCCCCC-CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPC-FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~-~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..+..|+.|.|..... ...++.-.+++.+.+... ...+++. ..+++++++++++ .+.+++++||++++
T Consensus 23 ~~~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~-~~~~G~~--~~~fe~~lA~~~g--------~~~~v~~~sGt~al 91 (438)
T PRK15407 23 HAPKPFVPGKSPIPPSGKVIDAKELQNLVDASLDF-WLTTGRF--NDAFEKKLAEFLG--------VRYALLVNSGSSAN 91 (438)
T ss_pred cccccccCCCCCCCcCccCCCHHHHHHHHHHHHhC-cccCChh--HHHHHHHHHHHhC--------CCeEEEECCHHHHH
Confidence 4445578888764322 123333345555555442 2233333 5799999999984 24689999999999
Q ss_pred HHHHHHh---------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 123 QVILTVL---------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 123 ~~~~~~l---------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
..++.++ ++|||+|+++.++|.++...+...|++++.+++++ ..+.+|++.+++.+.+++++|+++++
T Consensus 92 ~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~-- 168 (438)
T PRK15407 92 LLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT-- 168 (438)
T ss_pred HHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC--
Confidence 9988876 37899999999999999999999999999988764 35679999999999889999988775
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
+|.. .++++|.++|+++|+++|+|++|+.+. +.|. .+..++ .+.+.||+..-.+..-..|+++++++
T Consensus 169 -~G~p---~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~---~~G~~g----d~~~fSf~~~k~~~~geGG~l~t~d~- 236 (438)
T PRK15407 169 -LGNP---FDLAAVKAFCDKHNLWLIEDNCDALGSTYDGR---MTGTFG----DIATLSFYPAHHITMGEGGAVFTNDP- 236 (438)
T ss_pred -CCCh---hhHHHHHHHHHHCCCEEEEECccchhhhcCCe---eeeccC----ceEEEeCCCCCCccccCceEEEECCH-
Confidence 4543 578999999999999999999998754 2232 122222 14566776332222222488888753
Q ss_pred cchhHHHHHHHHhhhcccc----------------------------------------cCCchHHHHHHHHHhhccchh
Q 014631 273 GILQELRIVDSIKGYLNIS----------------------------------------SGPATFVQGAVPQIFKNTKED 312 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~~~l~~~~~~ 312 (421)
++.+.+....... ...+.+..+.+..- -.
T Consensus 237 ------~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~q-----L~ 305 (438)
T PRK15407 237 ------LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQ-----LE 305 (438)
T ss_pred ------HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH-----HH
Confidence 3443333221100 00111111111111 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCCCcee----EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC--
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPC-ITCPRKPEGSM----FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-- 385 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-- 385 (421)
.++++.++-+++.+++.+.|.++++ +.....+.+.. .+.+.++... ..+-.++... |+++||...+...
T Consensus 306 ~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~Rd~l~~~-L~~~GI~~~~~~~~~ 381 (438)
T PRK15407 306 KLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA---GFTRVELVKY-LEENKIGTRLLFAGN 381 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC---CCCHHHHHHH-HHHCCCCccccCCCc
Confidence 4666777777888888888887764 33222222221 2223333210 0123445554 5778997654321
Q ss_pred CCC----------------------CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 386 VGM----------------------KNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 386 ~~~----------------------~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
.+. ...+-+-+. .++++++.+++.|+++++
T Consensus 382 ~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 382 LTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred cccChhhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 000 112222232 478999999999999875
No 265
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=7.1e-20 Score=171.39 Aligned_cols=216 Identities=16% Similarity=0.151 Sum_probs=151.2
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeeccCC
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLLPE 165 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~ 165 (421)
.|++.++++- + .++. +++++|++|++.++.+++++||+|++++|.|.++.. .++..|.++..++..
T Consensus 68 ~Le~~la~le----~---~~~~-v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-- 137 (395)
T PRK05967 68 ALCKAIDALE----G---SAGT-ILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-- 137 (395)
T ss_pred HHHHHHHHHh----C---CCCE-EEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC--
Confidence 4555555443 1 2344 555558999999999999999999999999998864 456788888777421
Q ss_pred CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 245 (421)
+.+.+++++++++++|++.+|+||++.. .++++|+++|+++|+++|+|++|....+ ..++ .++.+
T Consensus 138 -----~~e~l~~al~~~TklV~lesPsNP~l~v---~dl~~I~~la~~~g~~vvVD~t~a~p~~----~~pl-~~GaD-- 202 (395)
T PRK05967 138 -----IGAGIAKLMRPNTKVVHTEAPGSNTFEM---QDIPAIAEAAHRHGAIVMMDNTWATPLY----FRPL-DFGVD-- 202 (395)
T ss_pred -----CHHHHHHhcCcCceEEEEECCCCCCCcH---HHHHHHHHHHHHhCCEEEEECCccCcee----cChh-HcCCC--
Confidence 3477999999999999999999998777 8899999999999999999999976321 1122 23333
Q ss_pred EEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 246 VITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 246 ~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
+++.|.+|.++. ++.-.|+++.+ +++.+++..... ...+.++.....+..-|+ -+.-+.++..+
T Consensus 203 -ivv~S~tKy~~Gh~d~~~G~v~~~--------~~~~~~l~~~~~~~G~~~~p~da~l~~rgl~-----Tl~lR~~~~~~ 268 (395)
T PRK05967 203 -ISIHAATKYPSGHSDILLGTVSAN--------EKCWPQLLEAHGTLGLCAGPDDTYQILRGLR-----TMGIRLEHHRK 268 (395)
T ss_pred -EEEEecccccCCCCCeeEEEEEcC--------HHHHHHHHHHHHHcCCCCCHHHHHHHHcCcc-----cHHHHHHHHHH
Confidence 889999999654 34556766553 223344432222 223455555444333333 35666777788
Q ss_pred HHHHHHHHhhcCCCccccCCC
Q 014631 324 TADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+...+.+.|+++|.+.-+.+|
T Consensus 269 na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 269 SALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred HHHHHHHHHHhCCCCcEEECC
Confidence 888899999988876534444
No 266
>PRK07678 aminotransferase; Validated
Probab=99.89 E-value=1e-19 Score=175.05 Aligned_cols=355 Identities=14% Similarity=0.105 Sum_probs=212.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... ...+|.+.+++.+++++... +.... ..+....+++.+.+..+ ..+.++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~--~~~~~-~~~~~~~lae~l~~~~~---~~~~v~f~~sGse 116 (451)
T PRK07678 44 IQGNRYLDGMSGLWCVNV-GYGRKELAEAAYEQLKTLSY--FPLTQ-SHEPAIKLAEKLNEWLG---GEYVIFFSNSGSE 116 (451)
T ss_pred CCCCEEEEccccHHhhcC-CCCCHHHHHHHHHHHHhcCc--ccccc-CCHHHHHHHHHHHHhCC---CCCEEEEeCCcHH
Confidence 458999999877544333 35789999999999986421 11111 12333444554444332 1358999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc-----CC-
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE-----VD- 171 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-----~d- 171 (421)
|+..+++.... +| .+|+....+|+++...+..... .+..++.+.... ++ -+
T Consensus 117 A~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (451)
T PRK07678 117 ANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPGIESEDIYDL 196 (451)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCccccccccCChHHHHH
Confidence 99999876531 24 5789999999987654443211 111222111000 00 01
Q ss_pred --HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 172 --LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 172 --~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
++.+++.+. ++..+.+|..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...
T Consensus 197 ~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~gv~P 275 (451)
T PRK07678 197 ECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMNYGVKP 275 (451)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHhcCCCC
Confidence 223455553 23345566777 5556765 577889999999999999999999999987777532 223333333
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFSK 316 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~ 316 (421)
+++ +++|.++...+++|.++++ +++++.+... ...+.+.++++++++.++|+...++ ..++
T Consensus 276 Div---t~gK~lggG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~~~~~~ 344 (451)
T PRK07678 276 DII---TMAKGITSAYLPLSATAVK--------KEIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIER 344 (451)
T ss_pred CEE---EeecccccCCcceeEEEEc--------HHHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhCCHHHH
Confidence 334 6789965433799999995 4677766531 1235678899999998888753332 2233
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC----CChHHHHHHHHhhcCeeEEeCCC--CCCCC
Q 014631 317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI----SDDMEFALQLAKEESVIVLPGMA--VGMKN 390 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gv~v~~g~~--~~~~~ 390 (421)
..+.-...++.+.+.+.+++.+..+ . ..|.+..+++........ .....+... +.++||++.+... ....+
T Consensus 345 ~~~~g~~l~~~l~~~~~~~~~v~~v-r-g~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~-l~~~Gv~~~~~g~~v~~~~~ 421 (451)
T PRK07678 345 SAQLGELLLEQLKEELGEHPLVGDI-R-GKGLLVGIELVNDKETKEPADNDKVASVVAA-CKEKGLIIGKNGDTVAGYNN 421 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEE-E-eeceEEEEEEecCCcccCcCchHHHHHHHHH-HHHCCcEEeecCccccCCCC
Confidence 3323333334444444444433212 2 235566666632110000 012334444 5678999976321 12246
Q ss_pred eEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 391 WLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+|++++ .++++|++++++|.++++++
T Consensus 422 ~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 422 VLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred EEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 7999987 69999999999999999765
No 267
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=2.9e-20 Score=175.02 Aligned_cols=219 Identities=15% Similarity=0.137 Sum_probs=152.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~ 162 (421)
...+|++.++++.+ . +..+ ++++|+.++..++ .++++||+|++++|.|.+... .+...|++++.++.
T Consensus 51 ~~~~Le~~lA~l~g------~-~~~~-~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 121 (377)
T PRK07671 51 TRAALEELIAVLEG------G-HAGF-AFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDT 121 (377)
T ss_pred HHHHHHHHHHHHhC------C-CceE-EeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECC
Confidence 35799999999873 2 2334 4555677887766 467899999999999985433 33457888887753
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
.|++++++++++++++|++++|+||||.+ .++++|.++|+++|+++|+|++|....+. . ++ .+..
T Consensus 122 -------~d~~~l~~ai~~~tklV~le~P~NPtg~~---~dl~~I~~la~~~g~~lvvD~a~~~~~~~-~---p~-~~g~ 186 (377)
T PRK07671 122 -------SNLEEVEEAIRPNTKAIYVETPTNPLLKI---TDIKKISTIAKEKGLLTIVDNTFMTPYWQ-S---PI-SLGA 186 (377)
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCEEEEECCCCccccC-C---hh-hhCC
Confidence 38899999998899999999999999998 56888999999999999999999753321 1 22 2222
Q ss_pred CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631 243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (421)
.+++.|+||.++.++ .-.|++++++ +++.+.+...+.. ....++.....+...+ ..+..+.++
T Consensus 187 ---Divv~S~sK~l~G~~~~~~G~~v~~~-------~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l-----~tl~~R~~~ 251 (377)
T PRK07671 187 ---DIVLHSATKYLGGHSDVVAGLVVVNS-------PELAEDLHFVQNSTGGILGPQDSWLLLRGL-----KTLGIRMEE 251 (377)
T ss_pred ---eEEEecCcccccCCccceeEEEEeCc-------HHHHHHHHHHHHhhcCCCCHHHHHHHHcCc-----ChHHHHHHH
Confidence 388899999987654 3456666643 3456666554433 2234444444333222 235557777
Q ss_pred HHHHHHHHHHHhhcCCCccccCCC
Q 014631 321 LRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.+++...+.+.|+++|++..++.|
T Consensus 252 ~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 252 HETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred HHHHHHHHHHHHHcCCCeeEEECC
Confidence 889999999999988776534343
No 268
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=4.6e-20 Score=175.78 Aligned_cols=222 Identities=14% Similarity=0.109 Sum_probs=156.6
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 162 (421)
...++++.+|++.+ . +..++|++|++|+++++.+++++||+|+++...|.+....+ ...|++++.++.
T Consensus 65 ~~~~le~~lA~l~g------~--~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALEG------G--VGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHhC------C--CcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 36799999999873 2 34688999999999999988999999999999998764443 457888888764
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
+ |++++++.+++++++|++.+|+||+|.+. ++++|.++|+++|+++|+|.+++... ...++ .++.
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~---Di~~I~~la~~~gi~livD~t~a~~~----~~~pl-~~Ga 201 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVL---DIPTVAAIAHEAGVPLLVDSTFTTPY----LLRPF-EHGA 201 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCccc---CHHHHHHHHHHcCCEEEEECCCcccc----cCCch-hcCC
Confidence 2 78999999999999999999999999995 58999999999999999999987532 12233 3333
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhH--------------------H-----HHHHHHh--hhcccccCCc
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE--------------------L-----RIVDSIK--GYLNISSGPA 295 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~--------------------~-----~~~~~~~--~~~~~~~~~~ 295 (421)
+ +++.|.+|.++.+|..+|.+++......+.+ . .+..+.. .........+
T Consensus 202 D---~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls 278 (433)
T PRK08134 202 D---LVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLS 278 (433)
T ss_pred C---EEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCC
Confidence 3 8888999998888877777766321100000 0 0000011 0111122344
Q ss_pred hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+.....+..-|+ -+..+.++..++...+.+.|+++|.+.
T Consensus 279 ~~~A~l~~~gL~-----tl~~R~~~~~~nA~~la~~L~~~p~V~ 317 (433)
T PRK08134 279 PMNAWQLLQGIE-----TLPLRMERHVANTRKVVAFLASHPAVA 317 (433)
T ss_pred HHHHHHHhcCCC-----cHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 444333333333 366777788888888999998887654
No 269
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.89 E-value=1.2e-19 Score=175.74 Aligned_cols=350 Identities=16% Similarity=0.124 Sum_probs=213.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|++++||..|.-....+ ..+|.+.+++.+++++... +... .+..+....+++.+.+.+. +...+.++|+++|+
T Consensus 86 ~dG~~ylD~~sg~~~~~lG-h~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SGs 161 (504)
T PLN02760 86 INGKKYLDALAGLWCTALG-GSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSGS 161 (504)
T ss_pred CCCCEEEEcCcCHHhcccC-CCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCChH
Confidence 3489999998875443333 6789999999999987321 1111 1223444555555443222 12235799999999
Q ss_pred HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhh-cCce------------eEeeeccCCCCc----------
Q 014631 120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARH-TRLE------------IRHFDLLPEKGW---------- 168 (421)
Q Consensus 120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~-~g~~------------~~~~~~~~~~~~---------- 168 (421)
+|+..+++... .++ .+|+..+.+|++....+.. .|.. +..++.+....+
T Consensus 162 EA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 241 (504)
T PLN02760 162 EANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEF 241 (504)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHH
Confidence 99999998763 133 5788899999987544332 2221 111111000000
Q ss_pred -cCCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 169 -EVDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 169 -~~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
....+++++.+. ++..+.++..| +...|.+ .|++.+++|.++|++||+++|+||+++++++.|..+. ...++.
T Consensus 242 ~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~~gv 320 (504)
T PLN02760 242 STRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDKYNI 320 (504)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHhcCC
Confidence 001234665552 23345567777 5556765 5678899999999999999999999999877776432 333333
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
..+ +.+|+|.++.+.+++|.++++ +++++.+... ...+.+.++++++++.+.|+...++
T Consensus 321 ~PD---ivtlgK~lggG~~PigAv~~~--------~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~~-- 387 (504)
T PLN02760 321 KPD---LVSLAKALSSAYMPIGAVLVS--------PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKER-- 387 (504)
T ss_pred CCc---EEEecccccCCccccceEeec--------HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence 222 347899965433589998885 3577766431 1234567899999999888753322
Q ss_pred HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCccccc-C-CCC----hHHHHHHHHhhcCeeEEeCCC
Q 014631 315 SKIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLE-G-ISD----DMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~~ll~~~gv~v~~g~~ 385 (421)
+..++.+++.+++.+.|++ .|.+..+ . .-|.++.+++...... . ... ...+.. .+.++||.+.+.
T Consensus 388 -~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~-- 461 (504)
T PLN02760 388 -NIPEHVNKIAPRFQDGIKAFSGSPIIGEI-R-GTGLILGTEFVDNKSPNDPFPAEWGVGAYFGA-ECKKRGMLVRVA-- 461 (504)
T ss_pred -CHHHHHHHHHHHHHHHHHHHhcCCCeeeE-E-eCceEEEEEEecCCcccccccchhHHHHHHHH-HHHhCCcEEEec--
Confidence 2344455555555555544 3322212 2 2255666666432110 0 000 223444 456789999763
Q ss_pred CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+.+|++++ .++++|++++++|.+++.++
T Consensus 462 ---g~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 462 ---GDNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 256899987 89999999999999998775
No 270
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=5.2e-20 Score=175.16 Aligned_cols=227 Identities=16% Similarity=0.075 Sum_probs=156.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~ 163 (421)
...|++.++++.+ .+..+++++|+.|+..++.+++++||+|+++...|.+.... +...|++++.++ +
T Consensus 71 ~~~Le~~lA~l~g--------~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-d 141 (436)
T PRK07812 71 QDVVEQRIAALEG--------GVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE-D 141 (436)
T ss_pred HHHHHHHHHHHhC--------CCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-C
Confidence 5789999998873 23467788889999999999999999999999999876543 334677766663 2
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+ .|++++++++++++++|++.+|+||+|.+ .++++|.++|+++|+++|+|++++... ...++ .++.+
T Consensus 142 ~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v---~Dl~~I~~la~~~gi~liVD~t~a~~~----~~~pl-~~GaD 208 (436)
T PRK07812 142 P-----DDLDAWRAAVRPNTKAFFAETISNPQIDV---LDIPGVAEVAHEAGVPLIVDNTIATPY----LIRPL-EHGAD 208 (436)
T ss_pred C-----CCHHHHHHhCCCCCeEEEEECCCCCCCee---cCHHHHHHHHHHcCCEEEEECCCcccc----cCCch-hcCCC
Confidence 1 28899999999899999999999999999 458899999999999999999986522 11222 22222
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchh-----------------------HHHHHHHHh--hhcccccCCchHH
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ-----------------------ELRIVDSIK--GYLNISSGPATFV 298 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~~~--~~~~~~~~~~~~~ 298 (421)
+++.|++|.++..|--+|.+++........ ++.++.+.. .........++..
T Consensus 209 ---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~ 285 (436)
T PRK07812 209 ---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPFN 285 (436)
T ss_pred ---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHHH
Confidence 778999999988877677777642210000 011111111 1112223445554
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
...+..-|+ -+..+.++..++...+.+.|+++|++.-+..|
T Consensus 286 a~l~~rgl~-----tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 326 (436)
T PRK07812 286 AFLIAQGLE-----TLSLRIERHVANAQRVAEFLEARDEVASVNYA 326 (436)
T ss_pred HHHHhcCcC-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 444333333 36677788889999999999998876534344
No 271
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=8.1e-20 Score=174.55 Aligned_cols=226 Identities=16% Similarity=0.136 Sum_probs=158.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~ 163 (421)
...|++.++++.+ .+..+++++|++|+.+++.+++++||+|+++.+.|.+... .+...|++++.++.
T Consensus 65 ~~~le~~lA~l~g--------~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~- 135 (427)
T PRK05994 65 NAVLEERVAALEG--------GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA- 135 (427)
T ss_pred HHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC-
Confidence 5788999999873 2357888999999999999999999999999999986543 35668888887753
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
.|++++++.+++++++|++.+|+||+|.+++ +++|.++|+++|+++|+|++|+... ...++ .++.+
T Consensus 136 ------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~gaD 201 (427)
T PRK05994 136 ------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGAD 201 (427)
T ss_pred ------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCCc
Confidence 2788999999889999999999999999965 7899999999999999999997522 12222 22332
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchh-H----------HH-----HH-----------HHHhhhcccccCCch
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ-E----------LR-----IV-----------DSIKGYLNISSGPAT 296 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-~----------~~-----~~-----------~~~~~~~~~~~~~~~ 296 (421)
+++.|++|.++.+|-.+|.+++......+. . +. +. .............++
T Consensus 202 ---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 278 (427)
T PRK05994 202 ---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAISP 278 (427)
T ss_pred ---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCH
Confidence 888999999887776677666632110000 0 00 11 111111122223444
Q ss_pred HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 297 FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 297 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
.....+..-|+ -+..+.++.+++...+.+.|+++|++.-+..|
T Consensus 279 ~~A~l~~~~l~-----tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP 321 (427)
T PRK05994 279 FNAFLILTGIE-----TLPLRMQRHSDNALAVAEWLKGHPKVSWVNYA 321 (427)
T ss_pred HHHHHHHcCcc-----cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 44444333343 36677778888889999999988876533333
No 272
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=3.1e-19 Score=171.27 Aligned_cols=349 Identities=17% Similarity=0.157 Sum_probs=211.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++|+..|...... ...+|.+.+++.+++.+... +....-..+....+|+.+....+. ...+.++++++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE 126 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTNV-GHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE 126 (441)
T ss_pred CCCCEEEECCCchhhccc-CCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 348889999888644333 35788999999999986321 111111134455566666543321 11368999999999
Q ss_pred HHHHHHHHhc-CC-CCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCC--Ccc---------CCHH
Q 014631 121 AIQVILTVLA-RP-GANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEK--GWE---------VDLD 173 (421)
Q Consensus 121 al~~~~~~l~-~~-gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~--~~~---------~d~e 173 (421)
|+..+++... .. .++|+....+|+++...+... +. .+..++.+..- .++ -+++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 9999987643 12 368889999999886544332 11 11222221100 000 0123
Q ss_pred HHHh-hhc----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631 174 GLEA-LAD----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246 (421)
Q Consensus 174 ~l~~-~~~----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (421)
.+++ .+. .+..+.++..| +...|.. .+.+.+++|.++|++||+++|+||+++++.+.|..+ ....++...++
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi 285 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI 285 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence 3555 222 23445566777 5556775 467889999999999999999999999877666533 22223322233
Q ss_pred EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
+ +++|.++ .|+++|++++++ ++.+........+.+.+++.++++.++|+...+ +..++.+++.+
T Consensus 286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~ 349 (441)
T PRK05769 286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE 349 (441)
T ss_pred E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 3 5889976 689999999863 344332222223446688899888888875322 44455556666
Q ss_pred HHHHHhhc----CCCccccCCCCceeEEEEecCccccc-CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631 327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLE-GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE 399 (421)
Q Consensus 327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~ 399 (421)
++.+.|++ ++.+..+ ..-|.+..+.+...... .......+... +.++||.+.+.. .+.+|++++ .+
T Consensus 350 ~l~~~L~~l~~~~~~~~~v--rg~G~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~Gil~~~~~----~~~lr~~p~l~~t 422 (441)
T PRK05769 350 YLRKELKELKEKYEFIGDV--RGLGLMIGVELVKDRKEPDPKLRDKVLYE-AFKRGLLLLGAG----KSAIRIIPPLIIT 422 (441)
T ss_pred HHHHHHHHHHHhCCCeeee--ecceEEEEEEeccCCccccHHHHHHHHHH-HHhCCcEEecCC----CCEEEEeCCCCCC
Confidence 66666654 3322211 22356666666322100 00012234443 467899987632 367999987 69
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014631 400 PSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~ 417 (421)
++++++++++|.+++.++
T Consensus 423 ~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 423 EEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998764
No 273
>PRK07482 hypothetical protein; Provisional
Probab=99.88 E-value=1.4e-19 Score=174.45 Aligned_cols=355 Identities=14% Similarity=0.075 Sum_probs=218.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++||..|.-....+ ..+|.+.+++.+++++... +... ....+.+..+|+.+.+..+ ...+.++++++|+
T Consensus 47 ~dG~~ylD~~sg~~~~~lG-h~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGS 121 (461)
T PRK07482 47 AQGRRYIDAFAGLYCVNVG-YGRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGLSGS 121 (461)
T ss_pred CCCCEEEEcccchhhhcCC-CCCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchH
Confidence 3589999998886544333 5689999999999987421 1111 1123455555555554332 2346899999999
Q ss_pred HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC---cc------
Q 014631 120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG---WE------ 169 (421)
Q Consensus 120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~------ 169 (421)
+|+..+++... . ++ .+|+....+|++....+...+. .+..++.+.... ++
T Consensus 122 EAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 201 (461)
T PRK07482 122 DANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQF 201 (461)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHH
Confidence 99999998753 1 22 5789999999987544332221 111111111000 00
Q ss_pred --CCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 170 --VDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 170 --~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
-+++.+++.+. ++..+.++..| +...|.. .+++.+++|.++|++||+++|.||+++++.+.|..+. ...++.
T Consensus 202 ~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~~gv 280 (461)
T PRK07482 202 SAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDHYGI 280 (461)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHhcCC
Confidence 13566777663 23345566777 5556766 5678899999999999999999999999987776432 233343
Q ss_pred CCCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchh-
Q 014631 243 TVPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKED- 312 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~- 312 (421)
..+++ +++|.+ ..|. ++|.++++ +++.+.+... ...+.+.|+++++++.+.|+...++
T Consensus 281 ~PDiv---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~~~~ 348 (461)
T PRK07482 281 EPDLI---TVAKGL-TSAYAPLSGSIVG--------EKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILEREN 348 (461)
T ss_pred CCCEE---EEcccc-ccCccccceeeec--------HHHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHHhCC
Confidence 33344 468995 4564 89998885 3566655421 1234578999999999988764332
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-C-CCC----hHHHHHHHHhhcCeeEEeCCCC
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-G-ISD----DMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
..++.++.-...++.+.+.++++|.+..+ . ..|.+..+++...... . ... ...+.. .+.++||++.++.
T Consensus 349 l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-r-G~Glm~giel~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~~-- 423 (461)
T PRK07482 349 LVGNAAEVGAYFRARLRAAFGDHPLVGEV-R-GVGMLAAVEFVADRDDRTPFDPALKIGPQVSA-AALERGVIARAMP-- 423 (461)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCEEEE-e-eceeEEEEEeccCCCcCCCCChhhHHHHHHHH-HHHHCCcEEecCC--
Confidence 23333333333344444444455443322 2 3356777777532100 0 000 123444 4467899986532
Q ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
..+.+|+.++ .+++++++++++|.++++++.+
T Consensus 424 -~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 424 -HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred -CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1367899876 8999999999999999987644
No 274
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.88 E-value=7.7e-20 Score=172.16 Aligned_cols=213 Identities=16% Similarity=0.157 Sum_probs=145.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~ 163 (421)
...|++.++++.+ .+..+++++|+.|+..++. ++++||+|++++|.|.+.. ..+...|+++..++.
T Consensus 52 ~~~Le~~la~l~g--------~~~al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~- 121 (380)
T PRK06176 52 RFALEELIADLEG--------GVKGFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDT- 121 (380)
T ss_pred HHHHHHHHHHHhC--------CCCEEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCC-
Confidence 5789999999873 2234555666779887774 6689999999999997653 334567877776653
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
.|++++++.+++++++|++.+|+||||.+. ++++|.++|+++|+++|+|++|+...+ +. ++ .++.
T Consensus 122 ------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~---di~~I~~la~~~gi~vivD~t~a~~~~-~~---p~-~~ga- 186 (380)
T PRK06176 122 ------SDLSQIKKAIKPNTKALYLETPSNPLLKIT---DLAQCASVAKDHGLLTIVDNTFATPYY-QN---PL-LLGA- 186 (380)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCceec---CHHHHHHHHHHcCCEEEEECCcccccc-CC---cc-ccCC-
Confidence 378999999988999999999999999995 488999999999999999999986432 11 22 2232
Q ss_pred CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
.+++.|++|.++.+|- -.|++++++ +++.+++....... ...++.....+...+ ..+..+.++.
T Consensus 187 --Divv~S~tK~l~g~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl-----~tl~~R~~~~ 252 (380)
T PRK06176 187 --DIVVHSGTKYLGGHSDVVAGLVTTNN-------EALAQEIAFFQNAIGGVLGPQDSWLLQRGI-----KTLGLRMEAH 252 (380)
T ss_pred --CEEEecCceeccCCccceeeEEEecH-------HHHHHHHHHHHHHhcCCCCHHHHHHHHhcc-----CcHHHHHHHH
Confidence 2888999999876653 456666543 24555554433321 223333333322222 2234455555
Q ss_pred HHHHHHHHHHhhcCCCcc
Q 014631 322 RDTADICYDRIKEIPCIT 339 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~ 339 (421)
.++...+.+.|+++|.+.
T Consensus 253 ~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 253 QKNALCVAEFLEKHPKVE 270 (380)
T ss_pred HHHHHHHHHHHHhCCCee
Confidence 667777788888776654
No 275
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.88 E-value=3.2e-19 Score=171.36 Aligned_cols=350 Identities=16% Similarity=0.142 Sum_probs=208.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|..++||..|...... ...+|.+.+++.+++++.... .|.. .+....+++.+.+..+ ...+.++++++|
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~ql~~~~~~~~~~~~----~~~~~~lae~L~~~~p--~~~~~v~f~~SG 122 (457)
T PRK05639 50 VDGNVFIDFLAGAAAAST-GYSHPKLVKAVQEQVALIQHSMIGYTH----SERAIRVAEKLAEISP--IENPKVLFGLSG 122 (457)
T ss_pred CCCCEEEECCcCHHhhcc-CCCCHHHHHHHHHHHHhccccccCccC----CHHHHHHHHHHHhhCC--CCcCEEEEeCch
Confidence 348899999877533222 357889999999999863211 1222 2333344444443222 223689999999
Q ss_pred HHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCC--cc----CCH----
Q 014631 119 KQAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKG--WE----VDL---- 172 (421)
Q Consensus 119 ~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~d~---- 172 (421)
++|+..+++... ....+|+....+|++....+... +. ++..+|.+.... +. -+.
T Consensus 123 sEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 202 (457)
T PRK05639 123 SDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELI 202 (457)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHHH
Confidence 999999998753 22357888999999876544322 11 122233221000 00 022
Q ss_pred ----HHHHhhh-----ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 173 ----DGLEALA-----DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 173 ----e~l~~~~-----~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
+.+++.+ .++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+. ...++
T Consensus 203 ~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~g 281 (457)
T PRK05639 203 NRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWFE 281 (457)
T ss_pred HHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhcC
Confidence 2344433 133445566677 5556765 5678899999999999999999999998876665322 22233
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
...+++ +++|.+ ..|.++|+++++ +++++........+.+.+++..+++.+.|+...++. ..++.
T Consensus 282 v~PDiv---~~gK~l-~gG~pi~av~~~--------~~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~~ 346 (457)
T PRK05639 282 VKPDLI---IFGKGV-ASGMGLSGVIGR--------KELMDLTSGSALLTPAANPVISAAAEATLEIIEEEN---LLKNA 346 (457)
T ss_pred CCCCEE---Eechhh-cCCCcceeEEeh--------HHHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHHH
Confidence 222333 378996 457899999985 356552221122345678888888888887533222 22333
Q ss_pred HHHHHHHHHHhhc----CCCccccCCCCceeEEEEecCcccc-cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631 322 RDTADICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLL-EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396 (421)
Q Consensus 322 ~~~~~~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~ 396 (421)
+++.+++.+.|++ .+-+..+ ..-|.+..+++..... +.......+.. .+.++|+++.+... ..+.+|+.+
T Consensus 347 ~~~g~~l~~~L~~l~~~~~~~~~V--rG~Gl~~gve~~~~~~~~~~~~~~~~~~-~~~~~Gv~~~~~g~--~~~~lr~~P 421 (457)
T PRK05639 347 LKVGEFIKKRLLEMKESFEVIGDV--RGKGLMIGVEIVKENGKPDPELTGKICW-RAFELGLILPSYGM--FGNVIRITP 421 (457)
T ss_pred HHHHHHHHHHHHHHHHhCCCEEee--ccceeEEEEEEecCCCCCCHHHHHHHHH-HHHhCCeEEeecCC--CCCEEEEeC
Confidence 3344444444433 4322212 2335666666632211 00001223444 44668999976421 147899998
Q ss_pred c--CCHHHHHHHHHHHHHHHHHhh
Q 014631 397 A--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+ .+++++++++++|.+++++..
T Consensus 422 pl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 422 PLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCccCHHHHHHHHHHHHHHHHHHH
Confidence 8 799999999999999998764
No 276
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.88 E-value=4.6e-20 Score=170.50 Aligned_cols=353 Identities=16% Similarity=0.123 Sum_probs=221.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|+.++|-..|-=... .....+++.+|+.+++++-... .++ ....-.+|-+.++++. + +-+-++|++++||+
T Consensus 42 ~G~r~lDg~sg~W~~~-~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~Pa~~LA~~L~~~a----P-~~~l~~vFf~~sGS 115 (449)
T COG0161 42 DGRRYLDGMSGLWCVN-HGHGRPEIAEAIKKQLDKLPHVMFGGFTHEPAIELAEKLAELA----P-EGGLDHVFFTDSGS 115 (449)
T ss_pred CCCEEEecccHHHHhh-cCcCCHHHHHHHHHHHHhCCchhhcccCCchHHHHHHHHHHhC----C-CCCccEEEEeCCch
Confidence 4666666655532211 1235688999999999873211 111 1111245556666655 1 12367899999999
Q ss_pred HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC------CCcc--
Q 014631 120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE------KGWE-- 169 (421)
Q Consensus 120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~------~~~~-- 169 (421)
+|++.+++... +|. .+++.-..+|++-.-.+.+.|. .+..++.+.. ..+.
T Consensus 116 eAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~ 195 (449)
T COG0161 116 EAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEE 195 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHH
Confidence 99999998753 243 3488889999876444433332 1112222110 1111
Q ss_pred --CCHHHHHhhhcc---CceEEEEeCC-CCC-cccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 170 --VDLDGLEALADE---NTVAMVIVNP-GNP-CGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 170 --~d~e~l~~~~~~---~~~~i~~~~p-~np-tG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
-..++|++.+.. .+.+.++..| ... +|+. +|+..++++.++|++||+++|.||+-++|.++|+.+.. ...+
T Consensus 196 ~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~-e~~g 274 (449)
T COG0161 196 FAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFAC-EHAG 274 (449)
T ss_pred HHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhh-hhcC
Confidence 125566665543 5677788888 344 7766 56678999999999999999999999999999986533 3333
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-c-----ccccCCchHHHHHHHHHhhccc-hhHH
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-L-----NISSGPATFVQGAVPQIFKNTK-EDFF 314 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~~~~~~~~l~~~~-~~~~ 314 (421)
...+++ +++|.+..+-+++|.++++ .++.+.+... . ..+.+.++++++++.+.|+... +.++
T Consensus 275 i~PDi~---~~aKGLT~GY~Pl~a~l~~--------~~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~e~e~l~ 343 (449)
T COG0161 275 IVPDIL---CLAKGLTGGYLPLSAVLTS--------DRIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDILEEEDLL 343 (449)
T ss_pred CCCCee---eecccccccchhhHhHhhh--------HHHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHHHhcCHH
Confidence 333344 6789977777889988885 3566766553 1 1356889999999999887644 3444
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 315 SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
++.++.-....+.+.+.+.+.|.+..+ ..-|++..+++........ ......+...+.++|++++|. .+.
T Consensus 344 ~~~~~~~~~l~~~L~~~l~~~p~VgdV--R~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~-----g~~ 416 (449)
T COG0161 344 ERVAEIGAYLQAGLQAALADHPLVGDV--RGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL-----GDV 416 (449)
T ss_pred HHHHHHHHHHHHHHHHhcccCCcEEEe--eccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec-----CCE
Confidence 444433444444444444444555422 2346677777754321100 012344555677889999996 245
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+=+++. .++++++++++.+.+++++..+
T Consensus 417 i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 417 IYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred EEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 556655 7999999999999999987654
No 277
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.88 E-value=5e-19 Score=169.70 Aligned_cols=348 Identities=16% Similarity=0.166 Sum_probs=211.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|.+++||..|.-.... ...+|.+.+++.+++++.. ...+ ....+.+..+++.+.+..+ ...+.++++++|+
T Consensus 43 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~~~~~---~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs 116 (442)
T PRK13360 43 HDGRRVLDGTAGLWCVNA-GHGRPEIVEAVRAQAGELDYAPAF---QMGHPKAFELANRIAEIAP--GGLNHVFFTNSGS 116 (442)
T ss_pred CCCCEEEECchhHHHhcc-CCCCHHHHHHHHHHHHhCCCcccC---CcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 358899999877533222 3578999999999998621 1111 1112344455555544332 2235899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCC---CCccC-----
Q 014631 120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPE---KGWEV----- 170 (421)
Q Consensus 120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~---~~~~~----- 170 (421)
+|+..+++.... +| .+|+....+|++....+... |. .+..+|.... ..+..
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 999999876431 22 57999999999875443221 10 1122222110 00111
Q ss_pred ---CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 171 ---DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 171 ---d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
..+++++.+. .+..+.+++.| +...|.. .+++.+++|.++|++||+++|+||+++++.+.|.... ...++.
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv 275 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPFA-AQYFGV 275 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchh-hhhcCC
Confidence 1456666663 23345566777 5556765 5678899999999999999999999988876665432 222232
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
..+++ +++|.++...+++|.++++ .++++.+... ...+.+.+++..+++.++|+...+.
T Consensus 276 ~PDiv---t~gK~l~gG~~P~gav~~~--------~~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~-- 342 (442)
T PRK13360 276 TPDLL---TCAKGLTNGAIPMGAVFVS--------SEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE-- 342 (442)
T ss_pred CCcee---eeeeccccCccceEEEEEc--------HHHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence 22222 7899975433789998885 3566655431 1234567888888888888753322
Q ss_pred HHHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 315 SKIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
...++.+++.+++.+.|+++ +.+..+ . ..|.+..+.+............++... +.++||.+.++ .+.
T Consensus 343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-G~Gl~~~~~l~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~ 413 (442)
T PRK13360 343 -GLLTRAARLAPYWEDALHSLRDAPHVIDI-R-NLGLVGAVELAPRDGKPGKRAYEVFLK-CFEKGLMIRYT-----GDI 413 (442)
T ss_pred -CHHHHHHHHHHHHHHHHHHhhcCCCeeee-e-ccceEEEEEEecCCCCcchhHHHHHHH-HHHCCcEEEec-----CCE
Confidence 23445555566666666543 222211 1 224444445532111000123345554 46679999764 257
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|++++ .+++++++++++|.++++++
T Consensus 414 lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 414 LALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 999977 89999999999999998764
No 278
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=3.4e-19 Score=171.18 Aligned_cols=352 Identities=13% Similarity=0.059 Sum_probs=214.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++++..... ...-..+....+++.+.+..+ ...+.++|+++|++
T Consensus 51 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGse 125 (453)
T PRK06943 51 RDGRRYLDAISSWWVNLF-GHANPRINAALKDQLDTLEHAM--LAGCTHEPAIELAERLAALTG--GTLGHAFFASDGAS 125 (453)
T ss_pred CCCCEEEEcchHHHHhcC-CCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCCHH
Confidence 458899999877433222 3578999999999998632110 000112344455555544332 22358999999999
Q ss_pred HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc--------
Q 014631 121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE-------- 169 (421)
Q Consensus 121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~-------- 169 (421)
|+..+++... .+| .+|+....+|++....+...+. .+..++.+...+ +.
T Consensus 126 Ave~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (453)
T PRK06943 126 AVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAA 205 (453)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHHHHH
Confidence 9999998752 123 6799999999987544332221 112222211100 00
Q ss_pred CCHHHHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 170 VDLDGLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 170 ~d~e~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
-+++++++.+.. +..+.++..| +...|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus 206 ~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~gv~P 284 (453)
T PRK06943 206 RALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAGVWP 284 (453)
T ss_pred HHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCCCCC
Confidence 124666666642 3344556666 5667764 677889999999999999999999999987777543 223334333
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 315 (421)
+++ +++|.++ .| +++|.++++ .++.+.+... ...+.+.+++.++++.++|+...++ .++
T Consensus 285 Div---t~gKgl~-gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~l~~ 352 (453)
T PRK06943 285 DFL---CLSKGIS-GGYLPLSLVLSR--------DAIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDDVLA 352 (453)
T ss_pred CeE---eeehhhc-cCcccceEEEEc--------HHHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 344 5689964 67 599999985 3566666421 1234567899999998888764332 233
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
+..+.-...++.+.+ +.+.+++..+ . .-|++..+++.............+.. .+.++||.+.+.. +.+|++
T Consensus 353 ~~~~~G~~l~~~L~~-l~~~~~v~~v-r-G~Gl~~gvel~~~~~~~~~~~~~i~~-~~~~~Gll~~~~g-----~~l~~~ 423 (453)
T PRK06943 353 RNARKSARLRAALAP-LAAHPQVRHL-R-QRGTIFAFDVALDGDAARTFSRRFFE-AALERELLLRPIG-----TTVYLM 423 (453)
T ss_pred HHHHHHHHHHHHHHH-HhcCCCEEeE-e-ccccEEEEEEccCCCcchHHHHHHHH-HHHHCCcEEEecC-----CEEEEe
Confidence 333333333333332 2334555422 2 33566667775211000000223444 4567899997642 469999
Q ss_pred ec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 396 FA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 396 ~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++ .+++++++++++|.+++++..+
T Consensus 424 Ppl~it~~eid~~~~~l~~al~~~~~ 449 (453)
T PRK06943 424 PPYVLDDDEIAWLAERTRATLDATLA 449 (453)
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 66 8999999999999999987643
No 279
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=3.9e-19 Score=162.58 Aligned_cols=313 Identities=20% Similarity=0.250 Sum_probs=210.5
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK 140 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~ 140 (421)
......+++.+.++.+.... ++. ..++++++++|++ ....+.++++|.|+.+++++| ++|||.|+++.
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~~--v~~FE~~~ae~~G--------~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GPF--VRRFEQAFAEYLG--------VKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-ChH--HHHHHHHHHHHhC--------CCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 34667788888888865533 544 5899999999983 567899999999999999966 58999999999
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
-+|..........|++++++.++++ .+.+|++.+|+++.+++|+|+.++ -.|.. .++++|.++|++||++||+
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVh---l~G~~---~dm~~i~~la~~~~l~vIE 154 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVH---LAGQP---CDMDAIMALAKRHGLPVIE 154 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEeh---hccCC---CCHHHHHHHHHHcCCeEEE
Confidence 9999999999999999999998764 567999999999999999998443 45666 4688999999999999999
Q ss_pred cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc------
Q 014631 221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS------ 291 (421)
Q Consensus 221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 291 (421)
|.+++.+. +.|.. +..++. +.+.||. |.+.. | -.|.+++++ +++.++++..+...
T Consensus 155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~hG~~~~~~ 218 (374)
T COG0399 155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNHGLSRDAV 218 (374)
T ss_pred EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence 99998855 33332 222322 4555665 76433 3 458888865 34666554433210
Q ss_pred -------cCCc--hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----eEEEEecCccc
Q 014631 292 -------SGPA--TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS----MFVMVKLNLSL 358 (421)
Q Consensus 292 -------~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~----~~~~~~~~~~~ 358 (421)
.+.| -....|+.-.. .-+.+++..++-++..+...+.|++++++.....+.+. ..+.+.++..
T Consensus 219 ~~y~~~~~G~N~rm~~iqAAigl~---QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~- 294 (374)
T COG0399 219 FKYLHEELGYNYRLTEIQAAIGLA---QLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE- 294 (374)
T ss_pred ccceeeecccccCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC-
Confidence 0111 11122211111 12445666666667777888888887766533333332 1222333321
Q ss_pred ccCCCChHHHHHHHHhhcCee----EEeCCCC--------C---C--------CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVI----VLPGMAV--------G---M--------KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~----v~~g~~~--------~---~--------~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
....+.+...|++.||. ..|-+.. . . ...+.+-+. .++++++++++.|+++
T Consensus 295 ----~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~ 370 (374)
T COG0399 295 ----GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEV 370 (374)
T ss_pred ----CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 12445555566888554 4442211 0 0 234555554 6889999999999998
Q ss_pred HHH
Q 014631 414 CQR 416 (421)
Q Consensus 414 ~~~ 416 (421)
+.+
T Consensus 371 ~~~ 373 (374)
T COG0399 371 LGS 373 (374)
T ss_pred hcc
Confidence 754
No 280
>PRK05965 hypothetical protein; Provisional
Probab=99.87 E-value=2.4e-19 Score=172.68 Aligned_cols=350 Identities=13% Similarity=0.092 Sum_probs=213.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|......+ ..+|++.+++.+++++... .........+.+..+++.+.+..+ .+.+.++++++|++
T Consensus 43 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~-~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGSE 118 (459)
T PRK05965 43 ASGHQLLDAFAGLWCVNVG-YGQESIVEAAAEQMRELPY-ATGYFHFGSEPAIRLAAKLAERAP--GSLNHVYFTLGGSD 118 (459)
T ss_pred CCCCEEEECcccHHhccCC-CCCHHHHHHHHHHHHhcCC-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCChhH
Confidence 4588999998775443222 4689999999999987321 000001112333445555544322 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc------------eeEeeeccCC--CCccCC------
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL------------EIRHFDLLPE--KGWEVD------ 171 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~------------~~~~~~~~~~--~~~~~d------ 171 (421)
|+..+++.... ++ .+|+....+|++....+... +. .+..++.+.. ..+.-|
T Consensus 119 Ave~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (459)
T PRK05965 119 AVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIA 198 (459)
T ss_pred HHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHH
Confidence 99999986431 33 57999999999875433221 11 0112221110 001112
Q ss_pred --HHHHHhhhcc---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 172 --LDGLEALADE---NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 172 --~e~l~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
++++++.+.. +..+.++..| +...|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus 199 ~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv~P 277 (459)
T PRK05965 199 ASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEAEGVVP 277 (459)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhhcCCCC
Confidence 2456666642 3345556666 6666765 577889999999999999999999999998777643 333344333
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
+++ +++|.+ ..| +++|.++++ +++++.+... ...+.+.++++++++.++|+...++.
T Consensus 278 Div---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~~~~-- 343 (459)
T PRK05965 278 DLM---TVAKGL-TSGYVPMGAVLMS--------DHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYHEGG-- 343 (459)
T ss_pred CeE---Eechhh-ccCCcceeEEEEc--------HHHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHHhcc--
Confidence 344 568995 567 599999985 3566666421 12355788999999988887533322
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccc-cCC-C---C-hHHHHHHHHhhcCeeEEeCCCC
Q 014631 316 KIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLL-EGI-S---D-DMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~---~-~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
..++.+++.+++.+.|++ .|.+..+ . .-|++..+++..... ... . . ...+. ..+.++||++.+..
T Consensus 344 -l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~-~~~~~~Gll~~~~g-- 417 (459)
T PRK05965 344 -LLANGQKAGPRFAAGLDALRAHPLVGDV-R-GRGLLGALELVADKATKTPFDAALDPADRIF-DRAYANGLVFRAFG-- 417 (459)
T ss_pred -HHHHHHHHHHHHHHHHHhhccCCCEEEE-e-ecceEEEEEEeccccccCCCCchhHHHHHHH-HHHHhCCeEEEecC--
Confidence 223344444444555543 3333312 2 335666666642110 000 0 0 12334 34567899997631
Q ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+.+|+.++ .+++++++++++|.++++++
T Consensus 418 --~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~ 448 (459)
T PRK05965 418 --DGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred --CcEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 357899987 79999999999999999875
No 281
>PRK02769 histidine decarboxylase; Provisional
Probab=99.87 E-value=7.7e-19 Score=164.55 Aligned_cols=290 Identities=15% Similarity=0.110 Sum_probs=203.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCc--EEEcCCHHHHHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDD--VYLTAGCKQAIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
..++++.+.+++.+.+|.+ +++ .++|+|||+++...+... ..+++.|++++..|++....++..|.+...++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~~--~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKIP--FNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCCC--CCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 4577777777777777643 344 488999999987665443 2578899999999999999999999998888875
Q ss_pred CCCCccCCHHHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC---cEEEEcccccccccCC-CCccc
Q 014631 164 PEKGWEVDLDGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG---IMVISDEVYDHLTFGS-TPYVR 236 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~-~~~~~ 236 (421)
+ ++.+|+++|++.++++ +.+|+++.++|+||.+ +++++|+++|+++| +++++|.+|+.+...- ....+
T Consensus 141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~i---dpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~ 215 (380)
T PRK02769 141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAI---DNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP 215 (380)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCccc---CCHHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence 4 4569999999998775 8888999999999999 66889999999998 6999999998854210 00001
Q ss_pred ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhhc
Q 014631 237 MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFKN 308 (421)
Q Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~ 308 (421)
+. ... +-..+..|.||+++ ....+|++++++. ..+.+.... ...++.+.....++..+|+.
T Consensus 216 ~d-~~~-~vDsis~s~HK~~~-~P~g~G~l~~r~~--------~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 216 FS-FAD-GIDSIAISGHKFIG-SPMPCGIVLAKKK--------YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred CC-ccC-CCCEEEECCcccCC-CCCCcEEEEEehh--------hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence 11 111 11255669999964 3355899998742 222221110 11234455566667777776
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
....++++..++..++.+++.+.|++. |+..+..|. .+.+.++.+ +.+ +. +|..+.+-
T Consensus 285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~-~~~v~f~~~---------~~~----~~--~~w~l~~~----- 342 (380)
T PRK02769 285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPN-SITVVFPCP---------SER----IW--KKWHLATS----- 342 (380)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCC-ceEEEEcCC---------CHH----HH--hCeeEccc-----
Confidence 667889999999999999999999886 887665565 333433322 112 12 35555442
Q ss_pred CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 389 KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
++++|+++. ++++.++.+++.|.+.+...
T Consensus 343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~~ 373 (380)
T PRK02769 343 GNQAHIITMPHHNKQQIDSLIDELIFDLKNP 373 (380)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHhcc
Confidence 258999987 68899999999999887644
No 282
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.87 E-value=1.5e-19 Score=184.34 Aligned_cols=313 Identities=12% Similarity=0.097 Sum_probs=214.7
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH----HHHHHHHHHhcCC-CC----eEEEcCCCCcch
Q 014631 79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAGCK----QAIQVILTVLARP-GA----NILLPKPGFPLY 146 (421)
Q Consensus 79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~----~al~~~~~~l~~~-gd----~Vl~~~p~y~~~ 146 (421)
++-|.|. +|+.++-..+.+++.+..| .+.|.++++++ ++++.+++.+.++ || .|+++...|.+.
T Consensus 554 ~hp~~p~~~~~g~~~~~~~~r~~la~i~g----~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn 629 (993)
T PLN02414 554 IHPFAPVDQAQGYQEMFEDLGDLLCEITG----FDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTN 629 (993)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHhC----CCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccC
Confidence 3455543 3544444444444444444 28999999998 8999999999866 88 899999999998
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
...+...|++++.++.+. ++.+|+++|++.+++ ++++|++++|+|-+|.. .++++|+++|+++|+++++|.+
T Consensus 630 ~a~a~~~G~~vv~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e---~~I~eI~~iah~~Galv~vDgA 704 (993)
T PLN02414 630 PASAAMCGMKIVVVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYE---EGIDEICDIIHDNGGQVYMDGA 704 (993)
T ss_pred HHHHHHCCCEEEEeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCcccccc---chHHHHHHHHHHcCCEEEEEec
Confidence 888888999999999853 346999999999984 67899999999999998 6799999999999999999999
Q ss_pred ccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhh------------h
Q 014631 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKG------------Y 287 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------~ 287 (421)
+..... .......++.+ ++++|.+|+|+. +|..+|++.+.. .+...+-. .
T Consensus 705 q~~a~~---~l~~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~--------~L~p~lPg~~v~~~~~~~~r~ 770 (993)
T PLN02414 705 NMNAQV---GLTSPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVPTGGIPRPE 770 (993)
T ss_pred CHHhcc---CcCCccccCCC---EEEecCCccCCcCcccCCCCeeeEEEch--------hhcccCCCCccccCCCccccc
Confidence 965210 12222344443 788899997763 345689998853 12222110 0
Q ss_pred ccc-ccC------CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE--EEecCccc
Q 014631 288 LNI-SSG------PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV--MVKLNLSL 358 (421)
Q Consensus 288 ~~~-~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~--~~~~~~~~ 358 (421)
... .++ .+.....++..++.....+++.+..++...+.+++.+.|++..++. ...|.+.++. .+.++ .
T Consensus 771 ~~s~iGt~~~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~--~ 847 (993)
T PLN02414 771 KTQPLGTISAAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLR--P 847 (993)
T ss_pred CCCCcCCccchhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEecc--c
Confidence 100 011 1113333444555544567888888899999999999998743444 2233333221 12333 1
Q ss_pred ccC--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 359 LEG--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 359 ~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++. ..+..++..+|+ ++|+.... ..|-..+.+|++++ ++++|||+++++|.++.++..+
T Consensus 848 l~~~~g~~~~di~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 848 FKNTAGIEPEDVAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred cccccCCCHHHHHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 110 124577777776 78997644 33444789999998 8899999999999998877653
No 283
>PRK06105 aminotransferase; Provisional
Probab=99.87 E-value=4.2e-19 Score=171.10 Aligned_cols=350 Identities=16% Similarity=0.132 Sum_probs=213.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|++++||..|......+ ..+|.+.+++.+++++... ..+ .....+.+..+++.+.+..+ ..-+.++++++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~~~~~~~~--~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 119 (460)
T PRK06105 45 DAGKRYIEGMAGLWSVALG-FSEQRLVEAAARQMKKLPFYHTF--SHKSHGPVIDLAEKLVAMAP--VPMSKVFFTNSGS 119 (460)
T ss_pred CCCCEEEEcchhHHhccCC-CCCHHHHHHHHHHHHhCCCeecc--cccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 4589999998885443332 5689999999999987321 111 01122444445555544332 2236899999999
Q ss_pred HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCc-e------------eEeeeccCCCCcc---------
Q 014631 120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRL-E------------IRHFDLLPEKGWE--------- 169 (421)
Q Consensus 120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~-~------------~~~~~~~~~~~~~--------- 169 (421)
+|+..+++... . +| .+|+....+|++....+...+. . +..++.+....+.
T Consensus 120 eAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 199 (460)
T PRK06105 120 EANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESEEAF 199 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCChHHH
Confidence 99999998742 1 23 5788889999987644432211 1 1111111000000
Q ss_pred --CCHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 170 --VDLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 170 --~d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
...+++++.+. ++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ....++.
T Consensus 200 ~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~~~v 278 (460)
T PRK06105 200 ATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCETFGI 278 (460)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHhcCC
Confidence 01345666552 23345566777 5566765 578889999999999999999999999887777543 2333333
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
..+++ +++|.++...+++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...+.
T Consensus 279 ~PDi~---~~gK~lggG~~P~~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~-- 345 (460)
T PRK06105 279 KPDIL---VMSKQLSSSYQPLSAVLMN--------EKVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEER-- 345 (460)
T ss_pred CCCee---eeecccccCcccceEEEEc--------HHHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 32333 6889975433689999985 3566665431 1234578889999888888753322
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCccccc--CCCC----hHHHHHHHHhhcCeeEEeCCC
Q 014631 315 SKIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLLE--GISD----DMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~~~~~ll~~~gv~v~~g~~ 385 (421)
+..++.+++.+++.+.|+ +.|.+..+ . .-|++..+++...... .... ...+.. .+.++||.+.+.
T Consensus 346 -~l~~~v~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~-~~~~~Gvl~~~~-- 419 (460)
T PRK06105 346 -DLVGNAAERGARLQARLRALADHPLVGEV-R-GVGLIAAVELVADKATKTPFEPPGKVGARANA-AAHEHGVISRAM-- 419 (460)
T ss_pred -cHHHHHHHHHHHHHHHHHHhhcCCCeEEE-E-ecceEEEEEEecCcccCCCCCchhHHHHHHHH-HHHHCCeEEEec--
Confidence 233344444444444444 34333212 2 2356666666421100 0000 123444 456789999873
Q ss_pred CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+.+|++++ .+++++++++++|.++++++.
T Consensus 420 ---g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 420 ---GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred ---CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 258999987 699999999999999998764
No 284
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=6.5e-21 Score=174.22 Aligned_cols=230 Identities=17% Similarity=0.160 Sum_probs=157.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
|..-+.++++.+|++++ . .+.+++++|+++++..++.+++++||+|+++.++|.+....+...|+++++++..
T Consensus 57 ~~g~i~~~~~~~A~~~g------a-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~ 129 (294)
T cd00615 57 PTGPIKEAQELAARAFG------A-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPE 129 (294)
T ss_pred CChHHHHHHHHHHHHhC------C-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCc
Confidence 33346799999999883 2 3345569999999999999999999999999999999998999999999888765
Q ss_pred CCCC----ccCCHHHHHhhhc--cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc-ccCCCCccc
Q 014631 164 PEKG----WEVDLDGLEALAD--ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL-TFGSTPYVR 236 (421)
Q Consensus 164 ~~~~----~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~ 236 (421)
.+.+ ..+|++++++.++ ++++++++++| |++|.+++ +++|+++|+++|+++|+|++|+.. .+.+.....
T Consensus 130 ~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~ 205 (294)
T cd00615 130 RNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSS 205 (294)
T ss_pred cCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcc
Confidence 4433 3689999999885 46788999998 68999965 889999999999999999999753 233321111
Q ss_pred ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHH
Q 014631 237 MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK 316 (421)
Q Consensus 237 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (421)
.. ..+..+++.|+||++ +|++.|+++..+.. ......+...+... .+++++.....++..++... ...-.+
T Consensus 206 ~~---~~~~div~~S~hK~l--~g~~~~~~l~~~~~-~~~~~~~~~~~~~~--~ttsps~~~~asl~~a~~~~-~~~g~~ 276 (294)
T cd00615 206 AA---MAGADIVVQSTHKTL--PALTQGSMIHVKGD-LVNPDRVNEALNLH--QSTSPSYLILASLDVARAMM-ALEGKE 276 (294)
T ss_pred hh---hcCCcEEEEchhccc--chHhHHHHHHhCCC-cCCHHHHHHHHHHH--CCCCcHHHHHHHHHHHHHHH-HHHhHH
Confidence 11 123458899999984 67766554433221 11111222222221 23466666666666655432 122234
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014631 317 IVDILRDTADICYDRIK 333 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~ 333 (421)
..++..++.+.+++.+.
T Consensus 277 ~~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 277 LVEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 45556666666666654
No 285
>PRK06062 hypothetical protein; Provisional
Probab=99.87 E-value=9e-19 Score=168.38 Aligned_cols=351 Identities=15% Similarity=0.134 Sum_probs=212.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... ...+|.+.+++.+++++... +.+ ....+.+..+++.+....+ ...+.++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGsE 123 (451)
T PRK06062 50 YEGRRYLDFSSQLVNTNI-GHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNGGAD 123 (451)
T ss_pred CCCCEEEEcccCHHhhcC-CCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCChHH
Confidence 458899999887543322 35788999999999987321 111 1123444555555544332 22468999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc-e-----------eEeeeccCCC--Ccc--CC-------HHHH
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL-E-----------IRHFDLLPEK--GWE--VD-------LDGL 175 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~-~-----------~~~~~~~~~~--~~~--~d-------~e~l 175 (421)
|+..+++... ..| .+|+....+|+++...+..... . +..++.+... .|. -| ++.+
T Consensus 124 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l 203 (451)
T PRK06062 124 ANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAHL 203 (451)
T ss_pred HHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHHHHH
Confidence 9999988653 133 6799999999988654443211 0 1111111100 010 01 5667
Q ss_pred Hhhhcc---CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 176 EALADE---NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 176 ~~~~~~---~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
++.+.. +..+.++..| +...|.+ .|++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++
T Consensus 204 e~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~--- 279 (451)
T PRK06062 204 ERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI--- 279 (451)
T ss_pred HHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee---
Confidence 776642 3345566667 5556766 577889999999999999999999999987666532 222233222233
Q ss_pred ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHH--HHH
Q 014631 251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL--RDT 324 (421)
Q Consensus 251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~ 324 (421)
+++|.++ .| +++|.++++ +++++.+... ...+.+.++++++++.++|+...++.+.++.++. ...
T Consensus 280 t~gK~lg-gG~~Pigav~~~--------~~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~~~~G~~~l 350 (451)
T PRK06062 280 TFAKGVN-SGYVPLGGVAIS--------EAIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIVENAARIGAEVL 350 (451)
T ss_pred eechhhh-cCCcCcEEEEEc--------HHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 6899964 56 489999985 3567766432 1235577889999988888753332222222222 123
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccc-cC-C-C------ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-EG-I-S------DDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~-~-~------~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
++.+.+...+.|.+..+ .. -|.+..+++..... .. . . ....+... +.++||++.+. .+.+|++
T Consensus 351 ~~~L~~l~~~~~~v~~v-rG-~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gvl~~~~-----~~~lrl~ 422 (451)
T PRK06062 351 GPGLRELAERHPSVGEV-RG-LGVFWALELVADRETREPLAPYGASSAAMAAVKAA-CKERGLLPFVN-----GNRIHVV 422 (451)
T ss_pred HHHHHHHHhcCCcEEeE-ec-cccEEEEEEcccccccCCCcccchhhHHHHHHHHH-HHHCCcEEeec-----CCEEEEE
Confidence 33444333334333212 22 35566666642110 00 0 0 02244444 56789998652 3579998
Q ss_pred ec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 396 FA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 396 ~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++ .++++|++++++|.++++++.
T Consensus 423 ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 423 PPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CCccCCHHHHHHHHHHHHHHHHHhh
Confidence 85 799999999999999998764
No 286
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.87 E-value=2.6e-19 Score=170.55 Aligned_cols=342 Identities=13% Similarity=0.132 Sum_probs=212.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|+.++|+..|...... ...+|.+.+++.+++++.....+.. ...+....+++.+.+..+ ...+.++++++|++
T Consensus 40 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~SGsE 114 (428)
T PRK07986 40 ADGRRLVDGMSSWWAAIH-GYNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADSGSV 114 (428)
T ss_pred CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 458899999887533222 2467999999999998732111111 112444555555554332 22468999999999
Q ss_pred HHHHHHHHhcC------C-CCeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCC---Cc-cCCHHHH
Q 014631 121 AIQVILTVLAR------P-GANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEK---GW-EVDLDGL 175 (421)
Q Consensus 121 al~~~~~~l~~------~-gd~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~d~e~l 175 (421)
|+..+++.... . ..+|+....+|++....+... +.. +..++..... .+ .-|++++
T Consensus 115 Ave~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l 194 (428)
T PRK07986 115 AVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPF 194 (428)
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHH
Confidence 99999886532 2 368999999999865443332 110 1112211000 00 1145677
Q ss_pred Hhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 176 EALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 176 ~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
++.+.. +..+.++..| +.-.|+. .+++.+++|.++|++||+++|+||++.++.+.|..+. ...++...+++
T Consensus 195 ~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~fa-~~~~gv~PDi~--- 270 (428)
T PRK07986 195 ARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLFA-CEHAGIAPDIL--- 270 (428)
T ss_pred HHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCeee-ecccCCCCCEE---
Confidence 776642 2344556666 4555654 4668999999999999999999999988766665432 22233222233
Q ss_pred ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
+++|.++ .| +++|.++++ +++++.+... ...+.+.++++.+++.++|+...+. +..++.++
T Consensus 271 t~gK~l~-gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~~~~ 338 (428)
T PRK07986 271 CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQVAA 338 (428)
T ss_pred Eechhhh-CCcccCcchhch--------HHHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHHH
Confidence 5899974 66 588888885 3677776542 1234567888888888888753322 23445555
Q ss_pred HHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631 324 TADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I 398 (421)
Q Consensus 324 ~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~ 398 (421)
+.+++.+.|+++ +.+..+ . ..|++..+.+.... ....+... +.++||++.+. .+.+|+.++ .
T Consensus 339 ~g~~l~~~l~~l~~~~~i~~v-R-g~Gl~~~ve~~~~~-----~~~~~~~~-l~~~Gl~~~~~-----g~~i~~~Ppl~i 405 (428)
T PRK07986 339 IEAQLREELAPLRDAPMVADV-R-VLGAIGVVETTRPV-----NMAALQRF-FVEQGVWIRPF-----GKLIYLMPPYII 405 (428)
T ss_pred HHHHHHHHHHHHhcCCCEEeE-e-ccceEEEEEeCCcc-----cHHHHHHH-HHHCCcEEEec-----CCEEEEeCCCCC
Confidence 555555555543 333311 1 23556666665321 23445444 56789999874 258999877 7
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 014631 399 EPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~~~ 416 (421)
+++++++++++|.+++++
T Consensus 406 t~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 406 LPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 999999999999999864
No 287
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.87 E-value=9.7e-19 Score=168.39 Aligned_cols=354 Identities=13% Similarity=0.061 Sum_probs=218.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC---CCCCcEEEcCC
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK---LSPDDVYLTAG 117 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~---~~~~~i~~~~g 117 (421)
..|..++|+..|.-....+ ..+|.+.+++.+++++-.. .. ...-..+.+..+++.+....+.. ...+.++++++
T Consensus 61 ~dG~~ylD~~~g~~~~~lG-h~~p~i~~Ai~~q~~~l~~-~~-~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~s 137 (472)
T PRK08742 61 HDGRRYLDAVSSWWTNLFG-HAEPRIGAAIAAQAGELEQ-VM-LAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADN 137 (472)
T ss_pred CCCCEEEEcCccHHhccCC-CCCHHHHHHHHHHHHhCCC-cc-ccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCC
Confidence 4588999998885443222 5688999999999875211 10 10111244555566555433211 12358999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCC--CccC----
Q 014631 118 CKQAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEK--GWEV---- 170 (421)
Q Consensus 118 ~~~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~---- 170 (421)
|++|+..+++.... +| .+|+....+|++....+...+.. +..+|.+... .++.
T Consensus 138 GSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~ 217 (472)
T PRK08742 138 GSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAED 217 (472)
T ss_pred chHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHH
Confidence 99999999886531 33 68999999999876554433211 1122211100 0011
Q ss_pred ----CHHHHHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 171 ----DLDGLEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 171 ----d~e~l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
+++.+++.+. ++..+.++..| ++..|.. .|++.++++.++|++||+++|.||+++++.+.|..+ ....++
T Consensus 218 ~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e~~g 296 (472)
T PRK08742 218 YALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF-ACEQAG 296 (472)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-HHHhcC
Confidence 2456666653 23445567777 5666764 677889999999999999999999999998777543 233334
Q ss_pred CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhH
Q 014631 242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
...+++ +++|.+ .+| +++|.++++ +++++.+... ...+.+.++++++++.++|+...++.
T Consensus 297 v~PDiv---~~gKgl-~gG~~Plaav~~~--------~ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~~~~ 364 (472)
T PRK08742 297 VMPDLL---CLSKGL-TGGFLPLSAVLAT--------QQLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFADDD 364 (472)
T ss_pred CCCCEE---EEcccc-cCCCCCcceeecc--------HHHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHHHCC
Confidence 333344 568995 457 489999985 3566655421 12345788999999988887644444
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC-C-CCh----HHHHHHHHhhcCeeEEeCCCCC
Q 014631 314 FSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG-I-SDD----MEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~----~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
+-++.++..+....+.+.++++|.+..+ . .-|++..+++....... . ... ..+. ..+.++||++.+.
T Consensus 365 l~~~~~~~g~~l~~~~~~~~~~~~i~dv-R-G~Gl~~giel~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gll~~~~---- 437 (472)
T PRK08742 365 VIARNQPTAARMTQLAAQIGEHPHVADV-R-QAGMVVAFELTRGGNKRTPFPPAARVGLHAY-RAALARGVVLRPL---- 437 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeeeE-e-ccceEEEEEeccCccccccCCchhHHHHHHH-HHHHHCCeEEEec----
Confidence 4333333333333444455555544422 2 33667777774321000 0 001 2333 3456789999873
Q ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+.+|+.++ .+++++++++++|.+++++.-
T Consensus 438 -g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 438 -GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 268999988 789999999999999998753
No 288
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.87 E-value=5.6e-19 Score=164.54 Aligned_cols=327 Identities=13% Similarity=0.131 Sum_probs=209.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..|.+++|+..|.-.... ...+|.+.+++.+++++... ..|. .....++.+.++++. ..+.+++++++
T Consensus 21 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~~~~~~~~~~-~~~~~~la~~l~~~~--------~~~~v~~~~SG 90 (364)
T PRK04013 21 SQGRRYLDLIAGIGVNVL-GHNHPEWVEEMSEQLEKLVVAGPMFE-HEEKEEMLEELSKWV--------NYEYVYMGNSG 90 (364)
T ss_pred CCCCEEEEcccChhhccC-CCCCHHHHHHHHHHHHhcCCccCCcC-CHHHHHHHHHHHhhc--------CCCEEEEeCch
Confidence 358899999877533222 24678899999999987321 1122 222234555555543 23589999999
Q ss_pred HHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcC--------ceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631 119 KQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTR--------LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 119 ~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~ 188 (421)
++|+..+++... ..| ++|+....+|++....+.... ..+....+.. -.+ .|++.+++.+.+++.++++
T Consensus 91 seA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~-~~~-~d~~~l~~~i~~~~aAviv 168 (364)
T PRK04013 91 TEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKH-IPF-NDVEAAKEAITKETAAVIF 168 (364)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEE-ecC-CCHHHHHHHhcCCcEEEEE
Confidence 999999998763 345 899999999998754444321 1111000000 011 2678888888766776655
Q ss_pred eCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 189 VNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 189 ~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
...+...|.. .+++.++++.++|++||+++|.||+++++ +.|..+ ....++...+++ +++|.++ .|+++|.++
T Consensus 169 Epi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~ 242 (364)
T PRK04013 169 EPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLTL 242 (364)
T ss_pred cCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEEE
Confidence 5556556664 56688999999999999999999999988 666533 223333333344 5689965 579999998
Q ss_pred eeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 268 TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
.+. ++ .. .....+.+.++++.+++.+.|+...++.+.++.+. . + +.+.. +.+..+ . .-|
T Consensus 243 ~~~--------~~-~~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~---~---l-~~l~~-~~v~~v-R-G~G 301 (364)
T PRK04013 243 TNF--------DV-ER--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKAGE---K---F-IEIKG-ERVVTT-R-GRG 301 (364)
T ss_pred ecc--------cc-cC--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHH---H---H-HHhcc-Ccceee-e-eCc
Confidence 853 12 11 11223567899999999998876443333222222 1 2 22222 333312 2 336
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+..+++.. ....+... +.++|+.+.+.. .+.+|+.++ .+++++++++++|.+++.+..
T Consensus 302 l~~gve~~~-------~~~~i~~~-~~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 302 LMIGIVLKK-------PVGKYVEE-LQNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred EEEEEEeCC-------cHHHHHHH-HHhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 777777752 13345544 567899997632 378999988 789999999999999998753
No 289
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.87 E-value=4.1e-19 Score=166.15 Aligned_cols=315 Identities=16% Similarity=0.144 Sum_probs=211.8
Q ss_pred CCcHHHHHHHHHHHhcCC--------CCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHHHHHHHHHh
Q 014631 61 RTTPVAADAVVDAVRSAE--------FDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQAIQVILTVL 129 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~--------~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~al~~~~~~l 129 (421)
+.|+.+++++.+.+.+.. .....+. .-+.++++.+++++ +. .+..++++ +++|+.+++.++..+
T Consensus 13 ~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~-~~~~~v~~~~gsgt~~~Ea~~~nl 87 (360)
T PRK05355 13 MLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NI-PDNYKVLFLQGGASLQFAMVPMNL 87 (360)
T ss_pred CCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CC-CCCcEEEEEcCCchHHHHHHHHhc
Confidence 578999999998864310 1111111 12345555556555 32 12345555 577899999999999
Q ss_pred cCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHh-hhccCceEEEEeCCCCCcccccCHHHHHH
Q 014631 130 ARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIVNPGNPCGNVFTYQQLQK 206 (421)
Q Consensus 130 ~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~-~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 206 (421)
..+|+++++...+..+. ...++..|.. ..+..++..+. .+..++++ .++++++.|.+++..+.||+..+ ++.+
T Consensus 88 ~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~~ 163 (360)
T PRK05355 88 LGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELPD 163 (360)
T ss_pred CCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--cccc
Confidence 99999988887666553 6677888864 55554432332 34444444 67778899999999999999974 3555
Q ss_pred HHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh
Q 014631 207 IAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG 286 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~ 286 (421)
| +|+++|+|.+++. |....++..++ +++.|.+|.+|.+| +|++++++ ++.+++..
T Consensus 164 i------~g~l~vVDavss~----g~~~idv~~~d-----~~~~ssqK~lgP~G--lg~l~~s~--------~~l~~~~~ 218 (360)
T PRK05355 164 T------GDVPLVADMSSDI----LSRPIDVSKFG-----LIYAGAQKNIGPAG--LTIVIVRE--------DLLGRALP 218 (360)
T ss_pred c------CCCcEEEEcCccc----cCccCCHHHcc-----EEEEeccccccCCc--eEEEEECH--------HHHhhccc
Confidence 4 7999999999987 44444444432 77889999998666 79998864 22222221
Q ss_pred -------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEE
Q 014631 287 -------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFV 350 (421)
Q Consensus 287 -------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~ 350 (421)
.....++|+....+++.++|+...+. +++.+.++.+++.+++++.|++++.+.....+. .+...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~ 298 (360)
T PRK05355 219 SIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNV 298 (360)
T ss_pred CCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEE
Confidence 11224688888999999988865556 799999999999999999999985333121211 11234
Q ss_pred EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+.++.. ....++... +.++|+.+.+|.. ..+.+|+|+. ++.+|++++++.|++++.+.
T Consensus 299 sf~~~~~-----~~~~~~~~~-~~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 299 PFTLADE-----ELDKKFLAE-AKAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred EEEcCCh-----HHHHHHHHH-HHHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 4444432 122344444 4667999876653 3478999997 78999999999999987653
No 290
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.86 E-value=1.1e-18 Score=168.07 Aligned_cols=345 Identities=13% Similarity=0.053 Sum_probs=211.7
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYL--- 114 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~--- 114 (421)
.+-|+|--.. -...+.+.+++...+.+....+ |+....+.++++...+...+.++ ...+.+.+
T Consensus 34 ~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~--~~~~~~~~nv~ 105 (475)
T PLN03226 34 WKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFR--LDPEKWGVNVQ 105 (475)
T ss_pred HcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhC--CCcceeEEecC
Confidence 5566775443 2456889999988884321122 33333456777644444444443 33444433
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCC---CCcchHH---HHhhcCceeE----eeeccCCCCccCCHHHHHhhhcc-Cc
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKP---GFPLYEA---NARHTRLEIR----HFDLLPEKGWEVDLDGLEALADE-NT 183 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p---~y~~~~~---~~~~~g~~~~----~~~~~~~~~~~~d~e~l~~~~~~-~~ 183 (421)
.++|+.|+..++.+|++|||+|+..+. +|.++.. ..+..+.... .+.+++ +++.+|++++++.+.. ++
T Consensus 106 ~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~-~~g~iD~d~Le~~l~~~~p 184 (475)
T PLN03226 106 PLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDE-STGLIDYDKLEKKAMLFRP 184 (475)
T ss_pred cCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecC-CCCCcCHHHHHHHHhhcCC
Confidence 367888999999999999999998553 3332211 1121222222 344443 3456899999998753 56
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
+.|+ +..++ +|.. .++++|.++|+++|+++++|++|.......... .++. .-.++++|+||+++ |.+
T Consensus 185 klIv-~~~S~-~s~~---~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~-----~~Div~~t~hK~L~--GP~ 252 (475)
T PLN03226 185 KLII-AGASA-YPRD---WDYARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE-----YCDVVTTTTHKSLR--GPR 252 (475)
T ss_pred eEEE-EecCc-CCCc---cCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC-----CCeEEEecCccccc--CCC
Confidence 6554 43343 6666 457788899999999999999998755443322 1221 12277899999973 333
Q ss_pred EEEEEeeCCCcch-------hHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 263 LGWLVTSDPSGIL-------QELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 263 ~G~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.|++++++.. .. ...++.+.+.... ...+++++...+++..+++......+++.+++..++.+++.+.|.
T Consensus 253 Gg~I~~~~~~-~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~ 331 (475)
T PLN03226 253 GGMIFFRKGP-KPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLM 331 (475)
T ss_pred ceEEEEchhh-cccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHH
Confidence 4888875321 00 0002222222221 123456666666666777654445567788999999999999998
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSA 402 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~ 402 (421)
+. |+.++........+++.+..... +..+ +...|++.||.+..+..++ .++.+|++.. .+++|
T Consensus 332 ~~-G~~l~~~~t~~hi~lv~~~~~gi----~~~~-~~~~L~~~~I~~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d 405 (475)
T PLN03226 332 SK-GYKLVTGGTDNHLVLWDLRPLGL----TGSR-VEKVLDLAHITLNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKD 405 (475)
T ss_pred hC-CCEEEcCCCCCCEEEEEccCCCC----CHHH-HHHHHHHCCCEECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHH
Confidence 85 88844322335566677743211 3443 4455688999998765332 2467898543 57899
Q ss_pred HHHHHHHHHHHHHH
Q 014631 403 LEEGLGRIKAFCQR 416 (421)
Q Consensus 403 l~~~~~~l~~~~~~ 416 (421)
++++.+.|.++++.
T Consensus 406 ~~~ia~~i~~~~~~ 419 (475)
T PLN03226 406 FEKVAEFLHRAVTI 419 (475)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999873
No 291
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.86 E-value=2.3e-18 Score=165.77 Aligned_cols=349 Identities=12% Similarity=0.091 Sum_probs=209.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|+.++||. |.-.... ...+|.+.+++.+++++.. +....-..+.+..+++.+.+..+ ...+.++++++|++|
T Consensus 70 dG~~ylD~~-g~~~~~l-Gh~~p~v~~Ai~~ql~~~~---~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGseA 142 (459)
T PRK06082 70 DGKKYMDFH-GNNVHQL-GYGHPHVIEKVKEQMAKLP---FSPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTSA 142 (459)
T ss_pred CCCEEEEcc-cHhhccc-CCCCHHHHHHHHHHHHhCC---CccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHHH
Confidence 478889986 4322122 2478999999999998632 11111123444555555554333 223689999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-Cce------------eEeeeccCCC--Ccc-C------CHHHHHh
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANARHT-RLE------------IRHFDLLPEK--GWE-V------DLDGLEA 177 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~~------------~~~~~~~~~~--~~~-~------d~e~l~~ 177 (421)
+..+++... ....+|+....+|++....+... |.. +..++..... .+. . +++.+++
T Consensus 143 ve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (459)
T PRK06082 143 IGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEY 222 (459)
T ss_pred HHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHH
Confidence 999987653 12368888899998875433322 211 1112211000 010 0 1345666
Q ss_pred hhcc-CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccc
Q 014631 178 LADE-NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKR 255 (421)
Q Consensus 178 ~~~~-~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 255 (421)
.+.. +..+.++..| ++..+...+++.++++.++|++||+++|+||+++++.+.|..+ ....++...+++ +++|.
T Consensus 223 ~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PDiv---~~gKg 298 (459)
T PRK06082 223 VIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDIL---CIGKG 298 (459)
T ss_pred HHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCCEE---Eeccc
Confidence 6642 2345566677 5444446777889999999999999999999999987777543 222233333333 47999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhh-hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKG-YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
++.+.+++|.+++++ ++...... ....+.+.++++.+++.+.|+...++ +..++.+++.+++.+.|++
T Consensus 299 l~gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~ 367 (459)
T PRK06082 299 LGGGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLE 367 (459)
T ss_pred ccCCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHH
Confidence 654336999999853 34433221 11235578889988888888753222 2344444555555555543
Q ss_pred ----CCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHH
Q 014631 335 ----IPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEE 405 (421)
Q Consensus 335 ----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~ 405 (421)
+|.+..+ . .-|.+..+++.......... ...++.. +.++||.+.+.. .+.+|++++ .+++++++
T Consensus 368 l~~~~~~i~~v-r-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~----~~~i~~~Ppl~it~~eid~ 440 (459)
T PRK06082 368 MKAKYPLIGDV-R-GIGLLWGVELVTDRHTKERAYDEAEAVLYR-CLNNGLSFKVSQ----GNVIQLSPPLIITREELTQ 440 (459)
T ss_pred HHhhCCCeeee-e-eccceeEEEEccCccccCccHHHHHHHHHH-HHhCCCEEEecC----CCEEEEeCCCccCHHHHHH
Confidence 4333312 2 33566667774321000001 2234443 467899997732 478999987 69999999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
+++++.+++.++.+
T Consensus 441 ~~~~l~~~l~~~~~ 454 (459)
T PRK06082 441 ALAILEEAIAKICQ 454 (459)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999987643
No 292
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=7.6e-19 Score=164.25 Aligned_cols=219 Identities=12% Similarity=0.142 Sum_probs=160.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 162 (421)
....|++.+|++- ..+..+++++|+.|++.++.+++++||+|++++..|.++...+ +..|.++..++.
T Consensus 63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 3578888888864 2457788888999999999999999999999999998876554 557888887753
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCccccccc
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
.|.+++++.+++++++|++.+|+||+|.+ .++++|+++|+++ |+++++|.+++... . .....+
T Consensus 135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v---~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~----~-~~pl~~ 199 (395)
T PRK08114 135 -------LIGADIAKLIQPNTKVVFLESPGSITMEV---HDVPAIVAAVRSVNPDAVIMIDNTWAAGV----L-FKALDF 199 (395)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCCEe---ecHHHHHHHHHHhCCCCEEEEECCCcccc----c-cCHHHc
Confidence 36789999999999999999999999999 5699999999998 49999999997622 1 122233
Q ss_pred CCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+.+ +++.|.+|.++.++ .-.|.++.+ +++.+.+..... .....++.....+...|+. +.-+.
T Consensus 200 GaD---ivv~S~tKyl~Ghsdv~~G~v~~~--------~~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~T-----L~lR~ 263 (395)
T PRK08114 200 GID---ISIQAGTKYLVGHSDAMIGTAVAN--------ARCWEQLRENSYLMGQMVDADTAYMTSRGLRT-----LGVRL 263 (395)
T ss_pred CCc---EEEEcCcccccCCCcceeEEEEcC--------HHHHHHHHHHHHhccCCCCHHHHHHHHcCCCc-----HHHHH
Confidence 433 88999999877765 566766543 223343433222 2235556665554444443 56667
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
++..++...+.+.|+++|.+.-+..|
T Consensus 264 ~~~~~na~~va~~L~~hp~V~~V~yP 289 (395)
T PRK08114 264 RQHEESSLKVAEWLAEHPEVARVNHP 289 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 78889999999999988776533344
No 293
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=5.9e-19 Score=168.18 Aligned_cols=341 Identities=13% Similarity=0.099 Sum_probs=210.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|...... -..+|.+.+++.+++++.....+... ..+....+++.+.+..+ ...+.++++++|++
T Consensus 37 ~dG~~ylD~~~g~~~~~l-Gh~~p~i~~ai~~q~~~~~~~~~~~~--~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 111 (422)
T PRK05630 37 EDGSTVIDAMSSWWSAAH-GHGHPRLKAAAHKQIDTMSHVMFGGL--THEPAIKLTRKLLNLTD--NGLDHVFYSDSGSV 111 (422)
T ss_pred CCCCEEEEcchhHHHhcC-CCCCHHHHHHHHHHHHhCCCcccCCc--CCHHHHHHHHHHHhhCC--CCcCEEEEeCCcHH
Confidence 458999999887544322 35789999999999987322111111 12334445555544222 22368999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCCCccC-C----HH
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEKGWEV-D----LD 173 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-d----~e 173 (421)
|+..+++.... ++ .+|+....+|++....+... +. ....+|.+....... + .+
T Consensus 112 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 191 (422)
T PRK05630 112 SVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEYLR 191 (422)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHHHHH
Confidence 99999886431 23 57999999999865444322 10 112222221110000 1 23
Q ss_pred HHHhhhccCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 174 GLEALADENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 174 ~l~~~~~~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
.+++.+.++. +.++..| +...|.. .+.+.++++.++|++||+++|+||++.++.+.|..+ ....++...+++
T Consensus 192 ~~~~~~~~~i-AAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~--- 266 (422)
T PRK05630 192 SLELLIDETV-AAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM--- 266 (422)
T ss_pred HHHHHHhhce-EEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee---
Confidence 4444454344 4456666 6667775 566889999999999999999999999887666533 222233222233
Q ss_pred ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631 251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (421)
+++|.+ ..| ..+|+++++ +++.+.+... ...+.+.++++.+++.++|+...+. ...++.+
T Consensus 267 t~gK~l-~gG~~p~~av~~~--------~~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~---~~~~~~~ 334 (422)
T PRK05630 267 CVGKAL-TGGFMSFAATLCT--------DKVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETG---MWRKQVK 334 (422)
T ss_pred eeechh-hcCccccceeecc--------HHHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhC---cHHHHHH
Confidence 789995 346 578999985 3566665421 1234578888998888888753322 2233455
Q ss_pred HHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631 323 DTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-- 397 (421)
Q Consensus 323 ~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-- 397 (421)
++.+++.+.|++ .|.+..+ . .-|++..+++... .....+.. .+.++|+.+.+. .+.+|+.++
T Consensus 335 ~~g~~l~~~L~~l~~~~~v~~v-R-g~Gl~~~ie~~~~-----~~~~~~~~-~~~~~Gl~~~~~-----g~~l~~~PpL~ 401 (422)
T PRK05630 335 RIEAELIAGLSPLAHLPGVADV-R-VLGAIGVVEMEQP-----VDMEEATQ-AAVDHGVWLRPF-----GRLVYVMPPYI 401 (422)
T ss_pred HHHHHHHHHHHHhhcCCCeeee-e-ccccEEEEEECCc-----ccHHHHHH-HHHHCCeEEEec-----CCEEEEECCcc
Confidence 555555555543 3333312 2 2366777777532 12334444 457789999763 268899987
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~ 416 (421)
.+++++++++++|+++++.
T Consensus 402 it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 402 TTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 7899999999999999854
No 294
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.86 E-value=2.2e-19 Score=153.00 Aligned_cols=327 Identities=15% Similarity=0.215 Sum_probs=213.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
-.+.+||-+...+ .+..++.++|.++..... -|+......+|++.+|+++++ ...+|+++|++..+
T Consensus 20 ~~~~vDLRSDTvT-----~PTdeMr~am~eA~vgDd--VyGeD~tt~rLE~~vA~l~GK-------EAgLFv~SGTmgNl 85 (384)
T KOG1368|consen 20 THRSVDLRSDTVT-----VPTDEMRRAMAEASVGDD--VYGEDPTTNRLEQRVAELFGK-------EAGLFVPSGTMGNL 85 (384)
T ss_pred eeecccccccccc-----CChHHHHHHHhhcccCcc--cccCCccHHHHHHHHHHHhCc-------cceeeecccccccH
Confidence 3566777766544 456788888888776654 466555578999999999853 44566666655555
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcc-hH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--------CceEEEEeCC
Q 014631 123 QVILTVLARPGANILLPKPGFPL-YE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--------NTVAMVIVNP 191 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~-~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--------~~~~i~~~~p 191 (421)
-.+...+-++|.+|++.+.+|.- |. .+..+.|+.+..+ .++++.-++++++++.++. -+++|.+.|-
T Consensus 86 laIm~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv--~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT 163 (384)
T KOG1368|consen 86 LAIMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRTV--KNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENT 163 (384)
T ss_pred HHHHHHhcCCCceEEeccchheeehhccChhhhccceeEee--eeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecc
Confidence 55555566799999999988853 32 2334455555554 4566777999999998862 3688888899
Q ss_pred CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 192 GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 192 ~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
+|-+| .++|.+++.++.++|++||+.++.|.+-.+-. -.|. ++..+...-.-+.+ .+||.+|.| +|-+++
T Consensus 164 ~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV---~vk~i~~~fDSVsi-CLSKglgAP---VGSViV 236 (384)
T KOG1368|consen 164 HNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGV---PVKKICSAFDSVSI-CLSKGLGAP---VGSVIV 236 (384)
T ss_pred ccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCC---CHHHHHHhhhhhhh-hhhccCCCC---cccEEE
Confidence 76565 99999999999999999999999998865422 1122 22222111111222 689997655 677766
Q ss_pred eCCCcchhHHHHHHHHhhhccc-ccC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-
Q 014631 269 SDPSGILQELRIVDSIKGYLNI-SSG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP- 344 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~- 344 (421)
.. ++++++.+.++.. .++ .+.+..+++..+|.+ .+. ..+.-.++...+.+.++..+++. +..|
T Consensus 237 G~-------k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a 303 (384)
T KOG1368|consen 237 GS-------KDFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPA 303 (384)
T ss_pred cc-------HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecch
Confidence 43 4566666555432 222 233444444444432 122 23344455666667777665576 3344
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
...+++.+.+..+.+ +...++.. ++++||.+.+|.. ..+|+.+. .++++++.++..+.+.+
T Consensus 304 ~etNiv~~~l~q~~~----~~~~l~~~-~~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~ 366 (384)
T KOG1368|consen 304 VETNIVNMVLCQARL----TAEELCKF-LEKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKF 366 (384)
T ss_pred hhcceeeeecccccC----CHHHHHHH-HHHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHH
Confidence 456677766654432 46666665 4889999998764 34899998 79999999999995443
No 295
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.86 E-value=1.8e-18 Score=166.02 Aligned_cols=349 Identities=17% Similarity=0.158 Sum_probs=212.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++||..|.-.... ...+|.+.+++.+++++... +....-..+....+++.+.+..+ ...+.++++++|++
T Consensus 46 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse 120 (445)
T PRK09221 46 ADGRKILDGTAGLWCCNA-GHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSGSE 120 (445)
T ss_pred CCCCEEEEccccHhhccC-CCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcHH
Confidence 358899999887544332 35789999999999986211 11111112334445555544332 12368999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC---CCCccC------
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP---EKGWEV------ 170 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~------ 170 (421)
|+..+++.... ++ .+|+....+|++....+...+. .+..+|.+. ...+..
T Consensus 121 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (445)
T PRK09221 121 SVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHG 200 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHHHH
Confidence 99999876431 22 5799999999987544332211 111222110 000110
Q ss_pred --CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 171 --DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 171 --d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
..+++++.+. .+..+.++..| +...|.. .+++.++++.++|++||+++|+||+++++.+.|..+ ....++..
T Consensus 201 ~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~gv~ 279 (445)
T PRK09221 201 AELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFGVT 279 (445)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcCCC
Confidence 1346666553 13344556666 6667775 466789999999999999999999999887666543 22223322
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHHH
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
.++ .+++|.++.+.+++|.++++ +++++.+... ...+.+.+++..+++.+.|+...++
T Consensus 280 PDi---~~~gK~l~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~--- 345 (445)
T PRK09221 280 PDI---ITFAKGLTNGAIPMGAVIAS--------DEIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE--- 345 (445)
T ss_pred CCE---EEeccccccCcccceeeEEc--------HHHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc---
Confidence 223 37889965433789998885 3566655321 1234567888888888888653222
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631 316 KIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i 392 (421)
+..++.+++.+++++.|+++ |.+..+ . .-|.+..+++.............+... +.++||.+.++ .+.+
T Consensus 346 ~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-r-g~Gl~~~v~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~-----~~~l 417 (445)
T PRK09221 346 DLFERAAELAPYFEDAVHSLKGLPHVIDI-R-NIGLVAGIELAPRPGAPGARGYEAFMK-CFEKGLLVRYT-----GDTI 417 (445)
T ss_pred cHHHHHHHHHHHHHHHHHhhccCCCEEEE-e-cCceEEEEEEecccccccchHHHHHHH-HHHCCeEEeec-----CCEE
Confidence 34556667777777777654 222211 1 224555556643211000112345544 46779999764 2579
Q ss_pred EEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 393 RITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 393 Ri~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
|++++ .+++++++++++|++++.++
T Consensus 418 r~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 99977 79999999999999998764
No 296
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.86 E-value=2.7e-19 Score=168.46 Aligned_cols=306 Identities=21% Similarity=0.278 Sum_probs=199.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCC
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPG 142 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~ 142 (421)
++..+++.+.++.+.+..+++. ..++++.+++|++ ...++.++++|.|+.+++.++ +++||+|+++..+
T Consensus 5 ~e~~~~v~~~l~s~~~~~~g~~--~~~fE~~~a~~~g--------~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t 74 (363)
T PF01041_consen 5 EEEIDAVLEVLRSGWLSTYGPY--VEEFEKEFAEYFG--------VKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYT 74 (363)
T ss_dssp HHHHHHHHHHHHHTCCSSSSHH--HHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS
T ss_pred HHHHHHHHHHHHhCCccCCCHH--HHHHHHHHHHHhC--------CCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCc
Confidence 4567788888887654443433 5899999999984 568999999999999999998 4799999999999
Q ss_pred CcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631 143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 143 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 222 (421)
+.+....+...|++++.++++++ .+.+|++.+++.+.+++++|++++. .|.. .++.+|.++|+++|++||+|.
T Consensus 75 ~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~---~G~~---~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 75 FPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHL---FGNP---ADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp -THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-G---GGB------HHHHHHHHHHTT-EEEEE-
T ss_pred chHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecC---CCCc---ccHHHHHHHHHHcCCcEEEcc
Confidence 99999999999999999999754 5689999999999999999986554 5555 579999999999999999999
Q ss_pred cccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc--------
Q 014631 223 VYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS-------- 291 (421)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 291 (421)
+++.+. +.|. .+..++ .+.+.||+ |.+ +.-..|++++++ +++.+++.......
T Consensus 148 a~a~g~~~~g~---~~G~~g----d~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~~ 211 (363)
T PF01041_consen 148 AQAFGARYKGR---PVGSFG----DIAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRNHGRSRDAFRR 211 (363)
T ss_dssp TTTTT-EETTE---ETTSSS----SEEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTBTTEETSECST
T ss_pred ccccCceeCCE---eccCCC----CceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhccCcCcccccc
Confidence 999854 2221 222222 26677775 764 333358888865 34556555433211
Q ss_pred ----------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc-----eeEEEEecCc
Q 014631 292 ----------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-----SMFVMVKLNL 356 (421)
Q Consensus 292 ----------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-----~~~~~~~~~~ 356 (421)
...+.+..+.+..-| ..+++..++-+++.+.+.+.|.+++++..+..+.+ .+.+.+.++.
T Consensus 212 ~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~ 286 (363)
T PF01041_consen 212 YRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPD 286 (363)
T ss_dssp TEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETC
T ss_pred ccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccc
Confidence 112323333333334 33667777777888899999999887642222222 1223344443
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCC-C-C------C----------------CCeEEEEec--CCHHHHHHHHHHH
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMA-V-G------M----------------KNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-~------~----------------~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
... ...+-+.+.+++.||...+... . + . ...+.+-+. .++++++.+++.|
T Consensus 287 ~~~----~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~i 362 (363)
T PF01041_consen 287 EAL----ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEAI 362 (363)
T ss_dssp CGC----STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHHH
T ss_pred ccc----chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhcc
Confidence 211 1234344455778999987652 1 1 0 123444443 5789999998887
Q ss_pred H
Q 014631 411 K 411 (421)
Q Consensus 411 ~ 411 (421)
+
T Consensus 363 r 363 (363)
T PF01041_consen 363 R 363 (363)
T ss_dssp H
T ss_pred C
Confidence 4
No 297
>PRK07046 aminotransferase; Validated
Probab=99.86 E-value=1.3e-18 Score=167.06 Aligned_cols=343 Identities=14% Similarity=0.109 Sum_probs=206.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..+|||..|...... ...+|.+.+++.+++++.....+ + .+.+..+++.+.+..+ .+.+.|+++|++|
T Consensus 73 DG~~yiD~~~g~g~~~l-Gh~~p~i~~Av~~q~~~~~~~~~-~----~~~~~~lAe~l~~~~~----~~~v~F~nSGtEA 142 (453)
T PRK07046 73 DGHRYDDFCLGDTGAMF-GHSPAPVARALAEQARRGLTTML-P----SEDAAWVGEELARRFG----LPYWQVATTATDA 142 (453)
T ss_pred CCCEEEEeccccccccc-CCCCHHHHHHHHHHHHhCCCCCC-C----CHHHHHHHHHHHHHhC----CCEEEEECCHHHH
Confidence 37788898777533222 35789999999999987533222 2 2445555555554332 4789999999999
Q ss_pred HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhh--cCceeEe------ee--ccC---CCCccCCHHHHHhhhccCceEE
Q 014631 122 IQVILTVLAR--PGANILLPKPGFPLYEANARH--TRLEIRH------FD--LLP---EKGWEVDLDGLEALADENTVAM 186 (421)
Q Consensus 122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~--~g~~~~~------~~--~~~---~~~~~~d~e~l~~~~~~~~~~i 186 (421)
+..+++.... ..++|+....+|+++...+.. .+..... ++ ... .-.|+ |++.+++.+..+..+.
T Consensus 143 ~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~vAa 221 (453)
T PRK07046 143 NRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEFN-DLAALEAALADGDVAA 221 (453)
T ss_pred HHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCCC-CHHHHHHHhCCCCeEE
Confidence 9999886531 236888899999997432211 1100000 00 000 00111 7888988885444556
Q ss_pred EEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631 187 VIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264 (421)
Q Consensus 187 ~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 264 (421)
++..| +...|.+ .+++.++++.++|++||+++|+||+++ +..+-........+.+ +++ +++|.+ ..|+++|
T Consensus 222 vi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~~~~gv~P--Di~---t~gK~l-ggG~Pi~ 294 (453)
T PRK07046 222 VLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYTRAHGLEP--DFL---VVGKPI-AGGVPCA 294 (453)
T ss_pred EEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchhHHhCCCc--cce---eehhhh-cCCCcce
Confidence 67777 4445654 556789999999999999999999997 3221111222222222 233 688996 4689999
Q ss_pred EEEeeCCCcchhHHHHHHHHhhh----------cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhh
Q 014631 265 WLVTSDPSGILQELRIVDSIKGY----------LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
.++++ .++++.+... ...+.+.++++.+++.+.|+... ++.+++..+.-...++.+.+.+.
T Consensus 295 av~g~--------~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~ 366 (453)
T PRK07046 295 VYGFS--------AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAVIA 366 (453)
T ss_pred eeeeh--------HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHH
Confidence 99985 4677766421 12245778899998888887532 23344444444444444444444
Q ss_pred cCCCccccCCCCceeEEEEecCcccccC------CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEG------ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALE 404 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~------~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~ 404 (421)
+. ++.......+. .+.+.+....... ..+ ...+... +.++||.+.|. .+.+++++.+++++|+
T Consensus 367 ~~-~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gv~~~~~-----~~~~~~~p~~t~~did 438 (453)
T PRK07046 367 RH-GLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLY-LLNRGVLITPF-----HNMMLVCPATTAADVD 438 (453)
T ss_pred hC-CCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHH-HHHCCCEEecc-----cCcEEEeCCCCHHHHH
Confidence 44 32211122223 3334442211000 001 1233333 45679999863 2467888889999999
Q ss_pred HHHHHHHHHHHHhh
Q 014631 405 EGLGRIKAFCQRHA 418 (421)
Q Consensus 405 ~~~~~l~~~~~~~~ 418 (421)
++++++.++++++.
T Consensus 439 ~~~~~~~~~l~~~~ 452 (453)
T PRK07046 439 RLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998764
No 298
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.86 E-value=1.1e-18 Score=166.62 Aligned_cols=345 Identities=13% Similarity=0.121 Sum_probs=212.7
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++++....... .-..+.+..+++.+....+ ...+.++++++|++
T Consensus 41 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse 115 (429)
T PRK06173 41 KDGRRLIDGMSSWWAALH-GYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEILP--PSLNKIFFADSGSV 115 (429)
T ss_pred CCCCEEEEccchHHhccC-CCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhCC--CCcCEEEEeCCchH
Confidence 358899999877433222 246799999999999873211110 0012333444444443222 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cc-------------eeEeeeccCCC---Cc-cCCHHH
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RL-------------EIRHFDLLPEK---GW-EVDLDG 174 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~-------------~~~~~~~~~~~---~~-~~d~e~ 174 (421)
|+..+++.... +| .+|+....+|++....+... +. .+..+|.+... .+ .-+++.
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~ 195 (429)
T PRK06173 116 AVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEP 195 (429)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHH
Confidence 99999876531 33 57889999999854333221 10 01112211000 00 013556
Q ss_pred HHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 175 LEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 175 l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+++.+. .+..+.++..| +...|.. .|++.++++.++|++||+++|+||++.++...|..+. ...++...+++
T Consensus 196 l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~gv~PDiv-- 272 (429)
T PRK06173 196 LQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLFA-LEHAGVVPDIM-- 272 (429)
T ss_pred HHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcchH-HHhcCCCCCEE--
Confidence 666664 23345566676 6666766 6788899999999999999999999988766665431 12223222233
Q ss_pred cccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631 250 GSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 250 ~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (421)
+|+|.++ .| +.++.++++ +++.+.+... . ..+.+.+++.++++.++|+...+. +..++.+
T Consensus 273 -~~gK~l~-gG~~p~~a~~~~--------~~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~~~~~ 339 (429)
T PRK06173 273 -CIGKALT-GGYLTLSATITT--------EAIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQQNIQ 339 (429)
T ss_pred -Eeehhhh-CCccccceEEec--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHHH
Confidence 4899974 66 478888875 3566666421 1 123457888888888888753222 2345556
Q ss_pred HHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631 323 DTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-- 397 (421)
Q Consensus 323 ~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-- 397 (421)
++.+++.+.|+++ |.+..+ -..|++..+.+.... ....+... +.++||.+.+.. +.+|+.++
T Consensus 340 ~~g~~l~~~L~~~~~~~~v~~v--Rg~Gl~~~iel~~~~-----~~~~i~~~-l~e~Gi~v~~~g-----~~l~~~Ppl~ 406 (429)
T PRK06173 340 RIEAQLKQELAPAAEFDSVAEV--RVLGAIGVVEMKEPV-----NMATLQPR-FVEHGIWVRPFG-----KLVYIMPPFI 406 (429)
T ss_pred HHHHHHHHHHHHhhcCCCeeee--eccceEEEEEeCCcc-----cHHHHHHH-HHHCCeEEEecC-----CEEEEeCCcc
Confidence 6666666666543 322211 123666667775321 23445544 567899998742 58999988
Q ss_pred CCHHHHHHHHHHHHHHHHHhhh
Q 014631 398 IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+++++++++++|.+++.+..+
T Consensus 407 it~~ei~~~~~~l~~~l~~~~~ 428 (429)
T PRK06173 407 ISPDELSQLTSGLLRVLKQEYN 428 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHHhc
Confidence 7899999999999999987643
No 299
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.86 E-value=5.1e-19 Score=156.46 Aligned_cols=323 Identities=18% Similarity=0.194 Sum_probs=227.3
Q ss_pred CCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc
Q 014631 57 FPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA 130 (421)
Q Consensus 57 ~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 130 (421)
+.+...+|.+.+|+++.+++..... -+...-.-+|++.+|++.++ +..++|+ +.--|+...+.+|.
T Consensus 181 YLgms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK-------~aALlFs-SCfVANDstLftLa 252 (570)
T KOG1360|consen 181 YLGMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK-------EAALLFS-SCFVANDSTLFTLA 252 (570)
T ss_pred cccccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC-------cceeeee-eeeeccchHHHHHH
Confidence 4556789999999999998742110 11222356999999999743 3344443 44444444444442
Q ss_pred --CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---c-CceEEEEeCCCCCcccccCHHHH
Q 014631 131 --RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---E-NTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 131 --~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~-~~~~i~~~~p~nptG~~~~~~~l 204 (421)
-||-.|..+...|.+.....+..+.+-..+.++ |++.|++++. + -+|+|.+...+..+|.+. ++
T Consensus 253 k~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHN-------D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavc---pl 322 (570)
T KOG1360|consen 253 KKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHN-------DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVC---PL 322 (570)
T ss_pred HHCCCcEEeccccchHHHHHHhhhcCCcceeeccC-------CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcC---CH
Confidence 388899999999999888888888765555543 6777777663 2 467888999999999994 58
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++|++++++||.+.++||+|....|+..+. .+..-+. +...|+-+++.|+||.-| ||+... ..+++
T Consensus 323 eelcDvah~yGAiTFlDEVHAVGlYG~rGa-GvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat--------~~LvD 390 (570)
T KOG1360|consen 323 EELCDVAHKYGAITFLDEVHAVGLYGPRGA-GVGERDGVMHKVDIISGTLGKAFGCVG---GYIAAT--------RKLVD 390 (570)
T ss_pred HHHHHHHHHhCceeeeehhhhhccccCCCC-CccccCCcchhhhhcccchhhhccccc---ceehhh--------hhHHH
Confidence 889999999999999999998877664332 1111111 122377899999999888 999885 35777
Q ss_pred HHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 283 SIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 283 ~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
.++.+.. ++.+.++.....+.++++......-...++..+++..++++.|.+. |+.+ .|..+..+-+++.+..
T Consensus 391 miRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiPV--i~~pSHIiPv~vgda~- 466 (570)
T KOG1360|consen 391 MIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIPV--IPNPSHIIPVRVGDAA- 466 (570)
T ss_pred HHHHhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCcc--cCCCcceeeeeccCHH-
Confidence 7766643 2344555666666666554222323455667778888999999987 8873 3555566666665432
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
...+..+.|+.++||+|....+... ...+||.+. ++++.++.+++.+..++.+.
T Consensus 467 ----l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 467 ----LAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred ----HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 2556778899999999998877654 457999886 89999999999999988775
No 300
>PRK07483 hypothetical protein; Provisional
Probab=99.86 E-value=2.8e-18 Score=164.56 Aligned_cols=358 Identities=16% Similarity=0.161 Sum_probs=214.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|.-.... -..+|.+.+++.+++++..... ......+....+++.+.+..+ ...+.++++++|++
T Consensus 27 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~av~~ql~~~~~~~--~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 101 (443)
T PRK07483 27 ATGKRYLDASGGAAVSCL-GHSHPRVIAAIHAQIDRLAYAH--TSFFTTEPAEALADRLVAAAP--AGLEHVYFVSGGSE 101 (443)
T ss_pred CCCCEEEEcCccHhhhcc-CCCCHHHHHHHHHHHHhccCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcHH
Confidence 358899999887544322 3578899999999998742111 110112444555555544322 22368999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCc---cC------
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGW---EV------ 170 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~---~~------ 170 (421)
|+..+++.... +| .+|+....+|++....+...+.. +..++.....+. ..
T Consensus 102 Ave~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (443)
T PRK07483 102 AVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYG 181 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHH
Confidence 99999886431 34 57889899999875444332110 111211100000 00
Q ss_pred --CHHHHHhhhc---cCceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 171 --DLDGLEALAD---ENTVAMVIVNP-GN-PCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 171 --d~e~l~~~~~---~~~~~i~~~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
.++++++.+. .+..+.++..| +. ..|. ..+++.++++.++|++||+++|.||+++++.+.|..+ ....++.
T Consensus 182 ~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~gv 260 (443)
T PRK07483 182 QRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDGV 260 (443)
T ss_pred HHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcCC
Confidence 0245665442 23344566677 43 2465 4677889999999999999999999999987777533 2223333
Q ss_pred CCCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccch-hHHH
Q 014631 243 TVPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTKE-DFFS 315 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 315 (421)
..+++ +++|.+ ..|+ ++|.++++ +++.+.+... ...+.+.++++.+++.+.|+...+ ...+
T Consensus 261 ~PDiv---~~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~l~~ 328 (443)
T PRK07483 261 APDLV---TIAKGL-GAGYQPIGAVLAS--------DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLA 328 (443)
T ss_pred CCCee---eehhhh-ccCccccEEEEEc--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 33334 568995 5675 99999985 3566666432 123557889999999888875333 2333
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-C-CC---C-hHHHHHHHHhhcCeeEEeCCCC--C
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-G-IS---D-DMEFALQLAKEESVIVLPGMAV--G 387 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~-~~---~-~~~~~~~ll~~~gv~v~~g~~~--~ 387 (421)
+.++.-...++.+.+.+++.|.+..+ . .-|++..+++...... . .. . ...+.. .+.++||++.+.... +
T Consensus 329 ~~~~~g~~l~~~L~~l~~~~~~i~~v-R-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gll~~~~~~~~~~ 405 (443)
T PRK07483 329 NVRARGEQLRARLRERLGQHPHVGDI-R-GRGLFVGVELVADRATKAPFDPALKLHARIKR-EAMARGLMVYPMGGTIDG 405 (443)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeeE-e-ecccEEEEEEeecccccCCCCchhhHHHHHHH-HHHHCCcEEEecCccccC
Confidence 33333333344444444445433312 2 3356666666432100 0 00 0 123444 456789999874211 1
Q ss_pred C-CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 388 M-KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 388 ~-~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
. ++.+|+.++ .+++++++++++|.+++.+..+
T Consensus 406 ~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~~ 440 (443)
T PRK07483 406 VRGDHVLLAPPFIITAAQIDEIVERLGDAIDAALA 440 (443)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 1 468999987 7999999999999999987654
No 301
>PRK12403 putative aminotransferase; Provisional
Probab=99.86 E-value=2.6e-18 Score=165.59 Aligned_cols=352 Identities=14% Similarity=0.138 Sum_probs=206.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-C-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CY-S-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y-~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
..|.+++||..|.-....+ ..+|.+.+++.+++++.... .+ . ......++.+.+++++ + ...+.++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~lG-h~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~----p--~~~~~v~f~~S 123 (460)
T PRK12403 51 NDGKRYLDGMSGLWCTNLG-YGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLL----P--GHYSHAIYTNS 123 (460)
T ss_pred CCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCC
Confidence 3488999998775333333 47899999999999873211 11 1 1111234455555443 2 22368999999
Q ss_pred HHHHHHHHHHHhc-------CCCC-eEEEcCCCCcchHHHHhhc-Cce-----------eEeeeccCC--CCccC-----
Q 014631 118 CKQAIQVILTVLA-------RPGA-NILLPKPGFPLYEANARHT-RLE-----------IRHFDLLPE--KGWEV----- 170 (421)
Q Consensus 118 ~~~al~~~~~~l~-------~~gd-~Vl~~~p~y~~~~~~~~~~-g~~-----------~~~~~~~~~--~~~~~----- 170 (421)
|++|+..+++... ++++ .|+....+|++....+... |.+ +..+|.+.. .++..
T Consensus 124 GseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 203 (460)
T PRK12403 124 GSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEF 203 (460)
T ss_pred cHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999999998764 2333 4555677888874433322 211 111211100 00011
Q ss_pred ---CHHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 171 ---DLDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 171 ---d~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
+.+++++.+. ++..+.++..| +...|.+ .+++.+++|.++|++||+++|+||+++++.+.|..+. ...++.
T Consensus 204 ~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~gv 282 (460)
T PRK12403 204 GRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFGF 282 (460)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcCC
Confidence 1344555442 23344566666 5556765 5678899999999999999999999999877776432 222333
Q ss_pred CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccchh-HHH
Q 014631 243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTKED-FFS 315 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 315 (421)
..+++ +++|.+ ..| .++|.++++ +++++.+... ...+.+.++++++++.++|+...++ ..+
T Consensus 283 ~PDiv---~~gK~l-ggG~~Piga~v~~--------~~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~l~~ 350 (460)
T PRK12403 283 EPDTL---SIAKGL-TSGYVPMGGLVLS--------KRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEGVVT 350 (460)
T ss_pred CCCeE---EEcccc-cccccceEEEEEC--------HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 32333 488996 456 489998885 3566665421 1234568899999998888753322 223
Q ss_pred HHH-HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc-CC-CCh---HHHHHHHHhhcCeeEEeCCCCCCC
Q 014631 316 KIV-DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE-GI-SDD---MEFALQLAKEESVIVLPGMAVGMK 389 (421)
Q Consensus 316 ~~~-~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~---~~~~~~ll~~~gv~v~~g~~~~~~ 389 (421)
+.. +.-...++.+.+...+.|.+..+ . ..|.+..+++...... .. ... ...+...+.++|+.+.+..
T Consensus 351 ~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~----- 423 (460)
T PRK12403 351 RVKDDTGPYLQRCLREVFGDHPLVGEV-Q-GAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTL----- 423 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCEEeE-e-ecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEEecC-----
Confidence 332 22333333344333445433312 2 3356666777432100 00 000 1112233467899997531
Q ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.+|++++ .++++++++++.|.++++++.+
T Consensus 424 ~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 424 GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45899988 5999999999999999988753
No 302
>PLN02880 tyrosine decarboxylase
Probab=99.85 E-value=2.5e-18 Score=166.35 Aligned_cols=341 Identities=9% Similarity=0.032 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR------- 131 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~------- 131 (421)
..+.+.+...++. ....|...++..++++.+.+|+.+.+|.+-. ...-++|+|||+++..++.+..+
T Consensus 97 ~~lad~l~~~~n~-~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g 175 (490)
T PLN02880 97 GFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVG 175 (490)
T ss_pred HHHHHHHHHhhcc-CCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhc
Confidence 4444445544433 2234545556789999999999998886532 12467889989887666544321
Q ss_pred ----CCCeEEEcCCCCcchHHHHhhcCce---eEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCcccc
Q 014631 132 ----PGANILLPKPGFPLYEANARHTRLE---IRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNV 198 (421)
Q Consensus 132 ----~gd~Vl~~~p~y~~~~~~~~~~g~~---~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~ 198 (421)
+.-.|++++.+|+++..++...|.. ++.+|.+.++++.+|+++|++.+.+. +.+|+-+..+..||.+
T Consensus 176 ~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~Gai 255 (490)
T PLN02880 176 KNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAV 255 (490)
T ss_pred ccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCccc
Confidence 1124667888999999999999985 67888765556789999999988532 3445556668889999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
+++++|+++|++||+++++|.+|+++...-... ..+..+..- .-+..++||++ .....+|++++++..
T Consensus 256 ---Dpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~a--DSit~d~HKwl-~~P~~~g~llvr~~~----- 324 (490)
T PLN02880 256 ---DPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEA--DSFNMNAHKWF-LTNFDCSLLWVKDRN----- 324 (490)
T ss_pred ---CcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhc--CEEEECchhhc-CCCccEEEEEEeCHH-----
Confidence 779999999999999999999999864321111 112222111 14566899995 666789999997532
Q ss_pred HHHHHHHhhhccc--------cc----------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 278 LRIVDSIKGYLNI--------SS----------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 278 ~~~~~~~~~~~~~--------~~----------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
.+.+.+.....+ .. ....+....+...|+....+.+.++.++..++++++.+.+++.|+++
T Consensus 325 -~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~e 403 (490)
T PLN02880 325 -ALIQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFE 403 (490)
T ss_pred -HHHHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 222222111100 00 00011122222334444456777777777799999999999988998
Q ss_pred ccCCCCceeEEEEecCcccccCC-CC--hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631 340 CPRKPEGSMFVMVKLNLSLLEGI-SD--DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAF 413 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~ 413 (421)
++..|..+ .+.++++....... .+ ...+.+++.++..+.+.+ ..+....++|+++. +++++++.+++.|.+.
T Consensus 404 l~~~~~~~-iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~ 481 (490)
T PLN02880 404 VVTPRIFS-LVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDE 481 (490)
T ss_pred EecCCceE-EEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 66444533 44555542110000 00 124555554445555544 44444678999997 4579999999999998
Q ss_pred HHHhhh
Q 014631 414 CQRHAK 419 (421)
Q Consensus 414 ~~~~~~ 419 (421)
.+++..
T Consensus 482 ~~~~~~ 487 (490)
T PLN02880 482 ASKLLG 487 (490)
T ss_pred HHHHHH
Confidence 877643
No 303
>PLN02590 probable tyrosine decarboxylase
Probab=99.85 E-value=3.1e-18 Score=165.65 Aligned_cols=341 Identities=12% Similarity=0.070 Sum_probs=220.8
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR------- 131 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~------- 131 (421)
..+.+.+...+.. ....|...++..++++.+.+|+.+.+|.+.. ...-++++|+++|+..++.+..+
T Consensus 145 ~~lgd~l~sa~n~-~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g 223 (539)
T PLN02590 145 GFLGEMLNAGLSV-VGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVG 223 (539)
T ss_pred HHHHHHHHHhccc-ccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhc
Confidence 4444555555543 2345656667889999999999999886532 13457788999887766544221
Q ss_pred ----CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCcccc
Q 014631 132 ----PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNV 198 (421)
Q Consensus 132 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~ 198 (421)
+.-.|.+++.+|+++..++...|+ +++.+|++..+++.+|+++|++.+.+. +-+|+-+..+..||.+
T Consensus 224 ~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGai 303 (539)
T PLN02590 224 KTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAV 303 (539)
T ss_pred ccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCccc
Confidence 112556678899999999999998 478888765456789999999988542 3345556667889999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
+++++|.++|++||+++++|.+|+++..--... ..+..++.-+ =+..++||+ +.....+|.++++++..
T Consensus 304 ---Dpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~AD--Sit~D~HK~-l~~p~~cg~llvr~~~~---- 373 (539)
T PLN02590 304 ---DPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENAD--SFNMNAHKW-LFANQTCSPLWVKDRYS---- 373 (539)
T ss_pred ---CCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCC--EEEECchhh-cCcCcCEEEEEecCHHH----
Confidence 899999999999999999999999866322111 1122222111 223479999 46667899999976431
Q ss_pred HHHHHHHhhh-----------------ccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 278 LRIVDSIKGY-----------------LNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 278 ~~~~~~~~~~-----------------~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+.+.+... ... ....-.+....+...|+....+.+.++.++..++.+++.+.+++.|+++
T Consensus 374 --l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fe 451 (539)
T PLN02590 374 --LIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFE 451 (539)
T ss_pred --HHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeE
Confidence 22222110 000 0011112333344455554568889999999999999999999999999
Q ss_pred ccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631 340 CPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAF 413 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~ 413 (421)
++..|.-+ .+.+++........ .-...+.+++.+ .|.............++|+++. +++++++.+++.|.+.
T Consensus 452 l~~~~~l~-iVcFr~~~~~~~~~~~~~ln~~l~~~l~~-~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~ 529 (539)
T PLN02590 452 VVTTRYFS-LVCFRLAPVDGDEDQCNERNRELLAAVNS-TGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKH 529 (539)
T ss_pred EecCCceE-EEEEEecCCCCCHHHHHHHHHHHHHHHHh-CCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 66445433 34444432110000 002344555433 4555544444444568999997 5789999999999998
Q ss_pred HHHhhh
Q 014631 414 CQRHAK 419 (421)
Q Consensus 414 ~~~~~~ 419 (421)
..++.+
T Consensus 530 a~~~~~ 535 (539)
T PLN02590 530 ASKFTR 535 (539)
T ss_pred HHHhcc
Confidence 877643
No 304
>PRK07481 hypothetical protein; Provisional
Probab=99.85 E-value=5.4e-18 Score=163.07 Aligned_cols=351 Identities=13% Similarity=0.119 Sum_probs=209.4
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++.+....... .....+.+..+++.+....+ +...+.++++++|++
T Consensus 39 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~sGsE 115 (449)
T PRK07481 39 IDGKKLLDGVGGLWNVNV-GHNREEVKEAIVRQLDELEYYSTF-DGTTHPRAIELSYELIDMFA-PEGMRRVFFSSGGSD 115 (449)
T ss_pred CCCCEEEECchhHHhhcC-CCCCHHHHHHHHHHHHhccceecc-cccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCchHH
Confidence 458899999877543322 357789999999999873211100 00112444555555544332 112468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCC--CCcc-CCHHHH-
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPE--KGWE-VDLDGL- 175 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~-~d~e~l- 175 (421)
|+..+++.... +| .+|+....+|+++...+...+. .+..++.+.. ..+. -|.+.+
T Consensus 116 Ave~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~ 195 (449)
T PRK07481 116 SVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELA 195 (449)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHH
Confidence 99999886431 34 5799999999997654433221 1111211100 0011 133333
Q ss_pred -------Hhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 176 -------EALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 176 -------~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
++.+. ++..+.++..| +...|.. .+++.++++.++|++||+++|.||+++++.+.|..+. ...++..
T Consensus 196 ~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~gv~ 274 (449)
T PRK07481 196 RICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGWGVK 274 (449)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhcCCC
Confidence 33332 23345566666 5556765 5778899999999999999999999999877765332 2233333
Q ss_pred CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccchhHH
Q 014631 244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
.+++ +++|.+ ..| +++|.++++ +++++.+... ...+.+.++++.+++.++|+...+..
T Consensus 275 PDiv---~~gKgl-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~~~- 341 (449)
T PRK07481 275 PDIM---CLAKGI-TSGYVPLGATMVN--------ARIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVRED- 341 (449)
T ss_pred CCEE---EEeecc-cCCCcCceEEEEc--------HHHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHhhh-
Confidence 3344 568995 456 589999985 3566666431 12345678999999888887533222
Q ss_pred HHHHHHHHHHHHHHHHHhh----cCCCccccCCCCceeEEEEecCcccc-cCCC----C-hHHHHHHHHhhcCeeEEeCC
Q 014631 315 SKIVDILRDTADICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL-EGIS----D-DMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~----~-~~~~~~~ll~~~gv~v~~g~ 384 (421)
..++.+++.+++.+.|+ ++|-+..+ . .-|.+..+++..... .... . ...+.. .+.++||.+.+..
T Consensus 342 --l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~g 416 (449)
T PRK07481 342 --LPANAAKRGAYLLEGLQPLKERFELVGDV-R-GKGLMLALDLVADKATREPIDPSKGYANAVAD-VARENGVLVRPSG 416 (449)
T ss_pred --HHHHHHHHHHHHHHHHHHHhhcCCCeEEE-e-ecceEEEEEecccccccCCCCchhHHHHHHHH-HHHhCCeEEEecC
Confidence 22333333444444443 34323212 2 235666677642110 0000 1 123333 4567899998742
Q ss_pred CCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 385 AVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 385 ~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
..+|++++ .+++++++++++|.++++++.
T Consensus 417 -----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 417 -----TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred -----CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 35899977 699999999999999998753
No 305
>PRK06917 hypothetical protein; Provisional
Probab=99.85 E-value=7e-18 Score=162.07 Aligned_cols=355 Identities=14% Similarity=0.125 Sum_probs=213.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++||..|.-.... -..+|.+.+++.+++++... .+.. .-..+.+..+++.+....+ ...+.++++++|++
T Consensus 28 ~dG~~ylD~~~g~~~~~l-Gh~hp~v~~Ai~~ql~~~~~-~~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 102 (447)
T PRK06917 28 QNGNKYFDGSSGAVTAGI-GHGVKEIADAIKEQAEEVSF-VYRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNSGSE 102 (447)
T ss_pred CCCCEEEECchhHHhccC-CCCCHHHHHHHHHHHhhCcC-cccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCChHH
Confidence 358899999877533222 25689999999999987421 1111 0112444555555554332 22358999999999
Q ss_pred HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--ccC-------
Q 014631 121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WEV------- 170 (421)
Q Consensus 121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~~------- 170 (421)
|+..+++... .+| .+|+....+|+++...+..... .+..++.+.... ++-
T Consensus 103 Ave~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 182 (447)
T PRK06917 103 ANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQL 182 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHH
Confidence 9999998762 133 6799999999988655433211 011111111000 000
Q ss_pred -CHHHHHhhhcc---CceEEEEeCC-CC-Ccccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 171 -DLDGLEALADE---NTVAMVIVNP-GN-PCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 171 -d~e~l~~~~~~---~~~~i~~~~p-~n-ptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+.+.+++.+.. +..+.++..| +. ..|.. .|++.++++.++|++||+++|+||+++++.+.|..+. ...++..
T Consensus 183 ~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~gv~ 261 (447)
T PRK06917 183 ACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHWGVE 261 (447)
T ss_pred HHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhcCCC
Confidence 23455666542 2345566777 43 34554 5788899999999999999999999998876665432 2223322
Q ss_pred CCEEEEcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 244 VPVITLGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
.+++ +++|.+ ..|. ++|.++++ +++++.+.... ..+.+.+++..+++.+.|+...+. +.
T Consensus 262 PDi~---~~gK~l-~~G~~Pi~a~~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l 326 (447)
T PRK06917 262 PDIM---TLGKGL-GAGYTPIAATVVS--------DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH---NL 326 (447)
T ss_pred CCEE---Eeeehh-ccCCcceEEEEEc--------HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC---CH
Confidence 2333 678995 4675 89999985 35666664321 124567889999988888753322 22
Q ss_pred HHHHHHHHHHHHHHhh----cCCCccccCCCCceeEEEEecCcccc--cCCCC----hHHHHHHHHhhcCeeEEeCCC-C
Q 014631 318 VDILRDTADICYDRIK----EIPCITCPRKPEGSMFVMVKLNLSLL--EGISD----DMEFALQLAKEESVIVLPGMA-V 386 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~----~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~~-~ 386 (421)
.++.+++.+++.+.|+ +.|.+..+ . .-|.++.+++..... ..... ...++.. +.++||.+.+... .
T Consensus 327 ~~~~~~~g~~l~~~L~~l~~~~~~i~~v-r-G~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gvl~~~~~~~~ 403 (447)
T PRK06917 327 PEKAAEKGEYLIKGLQKVQQQSTIIGDV-R-GKGLLIGVEFVADKKTKQPFSKSQAVASELISV-AAKNGLLLYPAVAGQ 403 (447)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEE-e-ecceEEEEEEeccCCcCCCCcchhHHHHHHHHH-HHhCCcEEEeccccc
Confidence 3334444444444443 34333212 2 235566666632110 00001 2234444 5678999987521 1
Q ss_pred -C-CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 387 -G-MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 387 -~-~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+ ..+.+|++++ .+++++++++++|.++++++.+
T Consensus 404 ~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 404 DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 1468999987 8999999999999999987643
No 306
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.85 E-value=3e-18 Score=159.94 Aligned_cols=281 Identities=18% Similarity=0.236 Sum_probs=185.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~ 163 (421)
...+++.++++-+ .+.++++++|+.|+..++.+++++||+|++....|.+....++ ..|.++.+++.
T Consensus 57 ~~~le~~la~Le~--------g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 57 VRALEQRLAALEG--------GEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp HHHHHHHHHHHHT---------SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred HHHHHHHHHHhhc--------ccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 4688888888762 3678999999999999999999999999999999998765554 46888777642
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-cEEEEcccccccccCCCCcccccccCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-IMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
-|++++++++++++++|++..|.||+..+ .++++|+++|+++| +++++|..++... .+.++ .++.
T Consensus 128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v---~Dl~~i~~~a~~~g~~~~vVDnT~atp~----~~~pL-~~Ga 193 (386)
T PF01053_consen 128 ------TDLEALEAALRPNTKLVFLESPSNPTLEV---PDLEAIAKLAKEHGDILVVVDNTFATPY----NQNPL-ELGA 193 (386)
T ss_dssp ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTT----TC-GG-GGT-
T ss_pred ------hhHHHHHhhccccceEEEEEcCCCccccc---ccHHHHHHHHHHhCCceEEeecccccee----eeccC-cCCc
Confidence 38899999999999999999999999888 77999999999998 9999999997632 11222 2333
Q ss_pred CCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631 243 TVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (421)
+ +++.|.+|.++..+-- .|.+++++. .++.+.+...... ....++.....+...|+. +.-+.++
T Consensus 194 D---ivv~S~TKyl~Ghsdv~~G~vv~~~~------~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~~ 259 (386)
T PF01053_consen 194 D---IVVHSATKYLSGHSDVMGGAVVVNGS------SELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRMER 259 (386)
T ss_dssp S---EEEEETTTTTTTSSSE-EEEEEESSH------HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHHH
T ss_pred e---EEEeeccccccCCcceeeEEEEECch------hhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHHH
Confidence 3 8899999997654433 566665431 2455555544332 234555555555555543 6677788
Q ss_pred HHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCee-EEe-
Q 014631 321 LRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI-VLP- 382 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~-v~~- 382 (421)
..++...+.+.|+++|.+.-+..| ..|..+.++++.. .+.+..+++.-.+. ..+
T Consensus 260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~--------~~~~~~f~~~l~l~~~~~S 331 (386)
T PF01053_consen 260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGG--------EEAARRFLDALKLFSIAPS 331 (386)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSH--------HHHHHHHHHH-SSSEESSS
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccc--------hhhhHhHHhhhhhHhhhhh
Confidence 889999999999998876534344 2233566677642 22333444444443 111
Q ss_pred -CCCC----------C------------C-CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 383 -GMAV----------G------------M-KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 383 -g~~~----------~------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
|... + . ++.+|+|++. |+.+.+++.|.++++
T Consensus 332 lGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 332 LGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE 386 (386)
T ss_dssp -SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred cCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence 1110 0 0 3679999995 456677777777764
No 307
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=2.2e-18 Score=166.05 Aligned_cols=348 Identities=13% Similarity=0.067 Sum_probs=213.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++||..|...... ...+|.+.+++.+++++.... .. ..-..+.+..+++.+.+..+ ...+.++++++|++
T Consensus 44 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~-~~-~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGsE 118 (466)
T PRK07030 44 FEGKRYLDAVSSWWVNVF-GHANPRINQRIKDQVDQLEHV-IL-AGFSHEPVIELSERLVKITP--PGLSRCFYADNGSS 118 (466)
T ss_pred CCCCEEEEcchhHHhhcC-CCCCHHHHHHHHHHHHhcCCc-cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 458899999887544322 256789999999999863211 10 01112444455555544222 23468999999999
Q ss_pred HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCC--CccC-------
Q 014631 121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEK--GWEV------- 170 (421)
Q Consensus 121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~------- 170 (421)
|+..+++... .+| .+|+....+|++....+...+.. +..+|..... .++.
T Consensus 119 Ave~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~ 198 (466)
T PRK07030 119 AIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSR 198 (466)
T ss_pred HHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHH
Confidence 9999988752 123 57899999999876554432211 1112211100 0011
Q ss_pred -CHHHHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 171 -DLDGLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 171 -d~e~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
+++.+++.+.. +..+.++..| +...|.. .+++.++++.++|++||+++|.||+++++.+.|..+ ....++...
T Consensus 199 ~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~gv~P 277 (466)
T PRK07030 199 RMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAGIRP 277 (466)
T ss_pred HHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcCCCC
Confidence 24556666642 3345566666 5556764 567889999999999999999999999987777633 222333333
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------h-cccccCCchHHHHHHHHHhhccchhHHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------Y-LNISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
+++ +++|.+ ..| +++|.++++ +++++.+.. . ...+.+.++++++++.++|+...++.
T Consensus 278 Div---~~gKgl-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~-- 343 (466)
T PRK07030 278 DFL---CLSKAL-TGGYLPLAAVLTT--------DTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQDN-- 343 (466)
T ss_pred CEE---eeehhc-cCCcccceEEEec--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhcC--
Confidence 344 568995 467 599999985 356666532 1 12345678999999988887643322
Q ss_pred HHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCccccc--CC-CC---hHHHHHHHHhhcCeeEEeCCCC
Q 014631 316 KIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLE--GI-SD---DMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~--~~-~~---~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
..++.+++.+++.+.|++ .|.+..+ . .-|++..+++...... .. .+ ...+... +.++||.+.+.
T Consensus 344 -l~~~~~~~G~~l~~~L~~l~~~~~v~~v-r-G~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~--- 416 (466)
T PRK07030 344 -VIENNRALARRMAEATAHLADHPHVAEV-R-QTGMILAIEMVQDKASKTPYPWQERRGLKVYQH-ALERGALLRPL--- 416 (466)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCEEEe-E-eceeEEEEEeccCccccccCcchhHHHHHHHHH-HHHCCeEEEec---
Confidence 233344444444444443 4444312 2 3366677777432100 00 00 1234444 46789999763
Q ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+.+|+.++ .+++++++++++|.++++++
T Consensus 417 --g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 --GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred --CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 257899876 79999999999999999876
No 308
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=1.7e-18 Score=164.97 Aligned_cols=222 Identities=16% Similarity=0.120 Sum_probs=152.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~ 163 (421)
...+++.++++.+ . . ..+++++++.|+..++..+.++||+|+++...|.+.. ..+...|+++..++ +
T Consensus 71 ~~~le~~la~l~g------~-~-~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd-~ 141 (437)
T PRK05613 71 VEALENRIASLEG------G-V-HAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE-N 141 (437)
T ss_pred HHHHHHHHHHHhC------C-C-eEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-C
Confidence 5688888888873 2 3 4444555558888888888899999999999998764 34467898888886 2
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+ .|++++++.+++++++|++..+.||+|.+ .++++|.++|+++|+++|+|.+++... ...++ .++.+
T Consensus 142 ~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v---~di~~I~~la~~~gi~livD~t~a~g~----~~~p~-~~GaD 208 (437)
T PRK05613 142 P-----DDPESWQAAVQPNTKAFFGETFANPQADV---LDIPAVAEVAHRNQVPLIVDNTIATAA----LVRPL-ELGAD 208 (437)
T ss_pred C-----CCHHHHHHhCCccCeEEEEECCCCCCCcc---cCHHHHHHHHHHcCCeEEEECCCcccc----ccChH-HhCCC
Confidence 2 27899999999999999888999999988 558999999999999999999986532 12222 22332
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcc----------------------------hhHHHHHH-HHhh-hcccccC
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGI----------------------------LQELRIVD-SIKG-YLNISSG 293 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~----------------------------~~~~~~~~-~~~~-~~~~~~~ 293 (421)
+++.|++|.++..|.-+|.+++.+.... ..+..+.. .... ......+
T Consensus 209 ---ivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~ 285 (437)
T PRK05613 209 ---VVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGAT 285 (437)
T ss_pred ---EEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCCC
Confidence 8888999998777666666555321100 00001110 1111 1122335
Q ss_pred CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 294 PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 294 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
.++.....+..-|+. +.-+.++..++...+.+.|+++|.+.
T Consensus 286 ~~p~~a~l~~rgl~T-----L~lR~~~~~~nA~~lA~~L~~hp~V~ 326 (437)
T PRK05613 286 LSPFNAWVTAQGLDT-----LSLRLERHNENAIKVAEFLNNHEKVA 326 (437)
T ss_pred CCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 566666555444443 56667788899999999999988764
No 309
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.85 E-value=4.9e-18 Score=160.39 Aligned_cols=304 Identities=12% Similarity=0.131 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHH-HHHHHHHHHhcC---CCCeEEEcCCCCcchHHHHhhcCceeEeeec-cC
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCK-QAIQVILTVLAR---PGANILLPKPGFPLYEANARHTRLEIRHFDL-LP 164 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~---~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~ 164 (421)
.+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++.. +||.|+++..+|.+...++...|++++.++. .+
T Consensus 105 ~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~~d 183 (444)
T TIGR03531 105 KLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETVLD 183 (444)
T ss_pred HHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeeeec
Confidence 44444444444444422 124588888888 688877777652 5899999999999999999999999999985 24
Q ss_pred CCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc--cc
Q 014631 165 EKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM--GV 239 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~ 239 (421)
++.+.+|++++++++.+ +.+++++.+|+ |+.....+++++|.++|++||+++|+|++|+..... ...+ ..
T Consensus 184 ~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~---~~~~~~~g 258 (444)
T TIGR03531 184 GDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNK---YMELINKA 258 (444)
T ss_pred CcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChh---hhhhhhcc
Confidence 55789999999999875 44566666665 333334489999999999999999999999863211 1111 11
Q ss_pred cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
.....-.+++.|++|.+.++|. .|.+++++ +++.+.+...... ...+...+.+...++. ...+++++..+
T Consensus 259 ~~~Grad~vv~s~hK~l~~pg~-Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~-~G~~g~~~li~ 328 (444)
T TIGR03531 259 IKVGRVDAVVSSTDKNFMVPVG-GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLS-LGSKGYLELLK 328 (444)
T ss_pred ccccCCCeEEEeCccCCCCCCC-EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHH-hCHHHHHHHHH
Confidence 1110113667799999887775 34444543 3466666554322 2234456666666665 35678888899
Q ss_pred HHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCC-------C
Q 014631 320 ILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGM-------A 385 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~-------~ 385 (421)
+..++++++.+.|+++ -|..+...|.+..-+-+.+.... . .+...+-.+|..++|. |.||. .
T Consensus 329 ~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~-~~~~~~g~~l~~~~v~g~r~v~~~~~~~~~~~~ 404 (444)
T TIGR03531 329 ERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---G-KDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCE 404 (444)
T ss_pred HHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---c-cCHHHHHHHHHhCCCCCceeecCCCceEECCEE
Confidence 9999999999988765 24443334454444444444221 1 1233344455555662 44554 2
Q ss_pred ---CCC------CCeEEEEe--cCCHHHHHHHHHHHHHH
Q 014631 386 ---VGM------KNWLRITF--AIEPSALEEGLGRIKAF 413 (421)
Q Consensus 386 ---~~~------~~~iRi~~--~~~~e~l~~~~~~l~~~ 413 (421)
|+. ..++-++. +.+++|++.++++|+++
T Consensus 405 ~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 405 FKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred eecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhc
Confidence 222 13444443 37899999999999875
No 310
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.85 E-value=2.4e-18 Score=165.86 Aligned_cols=348 Identities=12% Similarity=0.095 Sum_probs=212.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|++++|+..|.-.... ...+|.+.+++.+++++.. ...+. ...+.+..+++.+.+..+ ...+.++++++|+
T Consensus 53 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~l~~~~~~~---~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGs 126 (460)
T PRK06916 53 VNGNEYYDGVSSIWLNVH-GHQVPELDEAIREQLNKIAHSTLLG---LANVPSILLAEKLIEVVP--EGLKKVFYSDSGA 126 (460)
T ss_pred CCCCEEEEcchhHHHhhc-CCCCHHHHHHHHHHHHhCCCccccc---cCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 348889998766432212 3578999999999998721 11111 012334445555544332 2236899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCC--Ccc-------
Q 014631 120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEK--GWE------- 169 (421)
Q Consensus 120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~------- 169 (421)
+|+..+++.... +| .+|+....+|++....+...+. .+..+|.+... .++
T Consensus 127 eAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~ 206 (460)
T PRK06916 127 TAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIV 206 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHHH
Confidence 999999886532 33 6899999999987554433221 11222211100 001
Q ss_pred -CCHHHHHhhhc--cCceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 170 -VDLDGLEALAD--ENTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 170 -~d~e~l~~~~~--~~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
-+++++++.++ .+..+.++..| +...|.+ .|++.++++.++|++||+++|.||++.++.+.|..+ ....++..
T Consensus 207 ~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv~ 285 (460)
T PRK06916 207 KKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENVT 285 (460)
T ss_pred HHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCCC
Confidence 13455666664 23344556666 5666765 588889999999999999999999999987777533 22233333
Q ss_pred CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------h-cccccCCchHHHHHHHHHhhccchhHH
Q 014631 244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------Y-LNISSGPATFVQGAVPQIFKNTKEDFF 314 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~~l~~~~~~~~ 314 (421)
.+++ +++|.+ .+| +++|.++++ +++++.+.. . ...+.+.+++...++.+.|+...+.
T Consensus 286 PDiv---~~gK~l-~gG~~Pi~av~~~--------~ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~-- 351 (460)
T PRK06916 286 PDIM---TAGKGL-TGGYLPIAITVTT--------DEIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT-- 351 (460)
T ss_pred CCee---eeehhh-hcCccccceeeec--------HHHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 3333 578996 467 599999985 356665532 1 1224567889988888888753322
Q ss_pred HHHHHHHHHHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccc-cCC--CC---hHHHHHHHHhhcCeeEEeCCC
Q 014631 315 SKIVDILRDTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLL-EGI--SD---DMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~-~~~--~~---~~~~~~~ll~~~gv~v~~g~~ 385 (421)
+..++.+++.+++.+.|++ .+.+..+ .. -|.+..+++..... ... .+ ...+.. .+.++||.+.+.
T Consensus 352 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~v-rG-~Glm~giel~~~~~~~~~~~~~~~~~~~i~~-~~~~~Gvl~~~~-- 425 (460)
T PRK06916 352 -NLIEQVARKTEYVATQLEDLFALKHVGDI-RQ-LGLMVGIELVKNKETKEPFEWTERVGVQVCK-RSRELGMLTRPL-- 425 (460)
T ss_pred -cHHHHHHHHHHHHHHHHHHhhcCCCeEEe-ec-CCceeeEEeecccccccCCCchhhHHHHHHH-HHHHCCeEEEec--
Confidence 2334455555555555554 3333212 22 35566666643210 000 00 123444 456789999874
Q ss_pred CCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 386 VGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 386 ~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+.+|+.++ .+++++++++++|.++++++.
T Consensus 426 ---g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~ 457 (460)
T PRK06916 426 ---GNTIVFMPPLASTIDELDEMLRILYKAISDVT 457 (460)
T ss_pred ---CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhc
Confidence 257898876 799999999999999998764
No 311
>PRK07036 hypothetical protein; Provisional
Probab=99.85 E-value=5.3e-18 Score=163.56 Aligned_cols=350 Identities=17% Similarity=0.194 Sum_probs=211.1
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..++|+..|...... ...+|.+.+++.+++.+... ..+.. ...+.+..+++.+....+ ...+.++++++|+
T Consensus 48 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 122 (466)
T PRK07036 48 ADGRRYLDGIGGMWCVNV-GYGREEMADAIADQARRLPYYTPFGD--MTNAPAAELAAKLAELAP--GDLNHVFLTTGGS 122 (466)
T ss_pred CCCCEEEECcccHHhhcC-CCCCHHHHHHHHHHHHhCcccccccc--cCCHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 458899999887544332 25689999999999886311 11210 113445555555554332 2246899999999
Q ss_pred HHHHHHHHHhc------C-CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCC--CCccCC-----
Q 014631 120 QAIQVILTVLA------R-PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPE--KGWEVD----- 171 (421)
Q Consensus 120 ~al~~~~~~l~------~-~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d----- 171 (421)
+|+..+++... . +| .+|+....+|++....+...... +..++.+.. ..++..
T Consensus 123 eAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 202 (466)
T PRK07036 123 TAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFC 202 (466)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHH
Confidence 99999988642 1 22 57888999999876544332111 122221110 011111
Q ss_pred ---HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc-ccCC
Q 014631 172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG-VFGS 242 (421)
Q Consensus 172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~ 242 (421)
.+.+++.+. ++..+.++..| +...|.. .|++.++++.++|++||+++|+||+++++.+.|..+ ... .++.
T Consensus 203 ~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~~gv 281 (466)
T PRK07036 203 DFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAVFGI 281 (466)
T ss_pred HHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhhcCC
Confidence 233444442 23345556666 5556765 577889999999999999999999999987776532 222 2232
Q ss_pred CCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhH
Q 014631 243 TVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDF 313 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~ 313 (421)
..+++ +++|.+ ..| +++|.++++ +++++.+... . ..+.+.++++++++.+.|+...+.
T Consensus 282 ~PDiv---t~gK~l-~gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~~~- 348 (466)
T PRK07036 282 QPDII---TFAKGL-TSGYQPLGAVIIS--------ERLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIMERE- 348 (466)
T ss_pred CCCEE---EEcccc-ccCccccEEEEEc--------HHHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHHhC-
Confidence 22333 678996 457 589999985 3566666421 1 124577899999998888753322
Q ss_pred HHHHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCcccc-cCC-CC----hHHHHHHHHhhcCeeEEeCC
Q 014631 314 FSKIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLL-EGI-SD----DMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~-~~----~~~~~~~ll~~~gv~v~~g~ 384 (421)
+..++.+++.+++.+.|+ +.|.+..+ . .-|.+..+++..... .+. .. ...+. ..+.++||.+.+..
T Consensus 349 --~l~~~~~~~g~~l~~~L~~l~~~~~v~~v-r-G~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Gvl~~~~~ 423 (466)
T PRK07036 349 --GLCEHVREVGPYFEERLASLRELPLVGDV-R-GDHLMACVECVADKGSKALLPEDIAIGQRID-RHCQERGLLVRPLE 423 (466)
T ss_pred --CHHHHHHHHHHHHHHHHHHhccCCCEEEE-E-eeceEEEEEEccCccccCCCCchhHHHHHHH-HHHHHCCcEEeecC
Confidence 223334444444444443 34333212 2 235666777743210 000 00 12344 34567899998642
Q ss_pred CCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 385 AVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 385 ~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.+|++++ .+++++++++++|.++++++.+
T Consensus 424 -----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~~ 455 (466)
T PRK07036 424 -----HLCVLSPPLIITRAQIDEIVAILRAAIEETAD 455 (466)
T ss_pred -----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 46889976 6999999999999999877643
No 312
>PRK06148 hypothetical protein; Provisional
Probab=99.85 E-value=4.2e-18 Score=178.06 Aligned_cols=351 Identities=13% Similarity=0.076 Sum_probs=212.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|+.++||..|... ....+|.+.+++.+++.+...+.... .+.+..+++.+.+..+ ...+.++|+++|++
T Consensus 621 ~dG~~ylD~~~g~~~---lGH~hp~v~~Ai~~q~~~l~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGsE 691 (1013)
T PRK06148 621 NRGRAYLDCFNNVCH---VGHAHPRVVAAAARQAARLNTNTRYL----HDAIVAYAERLTATLP--DGLTVAFFVNSGSE 691 (1013)
T ss_pred CCCCEEEEcccChhh---cCCCCHHHHHHHHHHHhhcCCcCCcC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 348899999877422 23578999999999998642221111 2344445555544332 22367999999999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC--CCCccC-C-------HHHH
Q 014631 121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP--EKGWEV-D-------LDGL 175 (421)
Q Consensus 121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-d-------~e~l 175 (421)
|+..+++.... .| .+|+....+|++....+...+. .+..++.+. ...++. + .+.+
T Consensus 692 A~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l 771 (1013)
T PRK06148 692 ANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESV 771 (1013)
T ss_pred HHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHH
Confidence 99999987532 23 6789999999987543322110 011111100 001110 1 1334
Q ss_pred Hhhhc-----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 176 EALAD-----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 176 ~~~~~-----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
++.+. .+..+.+|..| +...|. ..|++.++++.++|++||+++|.||+++++.+.|........++....++
T Consensus 772 ~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv- 850 (1013)
T PRK06148 772 AEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV- 850 (1013)
T ss_pred HHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee-
Confidence 44332 13345567777 444555 46778899999999999999999999999887775333444344333333
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTA 325 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~ 325 (421)
+++|.+ .+|+++|.++++ +++++.+.... ..+.+.|+++++++.+.|+...++ ..++.++.-...+
T Consensus 851 --t~gK~l-ggG~Plgav~~~--------~ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~l~~~~~~~G~~l~ 919 (1013)
T PRK06148 851 --TMGKPI-GNGHPMGAVVTT--------REIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLL 919 (1013)
T ss_pred --eecccc-cCCcceEEEEEc--------HHHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 678995 568999999995 46777665322 235678999999998888754332 2233333333333
Q ss_pred HHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCH
Q 014631 326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEP 400 (421)
Q Consensus 326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~ 400 (421)
+.+.+..++.|.+..+ . ..|.++.+++.........+ ...++.. +.++||++.+.... .+.+|+.++ .++
T Consensus 920 ~~L~~l~~~~~~i~~V-r-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-~~~~Gvl~~~~g~~--~~vlr~~Ppl~it~ 994 (1013)
T PRK06148 920 AGLRELQDRFDIIGDV-R-GMGLFLGIELVTDRKTKAPATAIARYVKNG-ARERGILIGTEGPH--DNVLKIRPPLIFSR 994 (1013)
T ss_pred HHHHHHHHhCCCceEE-e-eeceEEEEEecCCccccCccHHHHHHHHHH-HHhCCeEEeccCCC--CCEEEEeCCccCCH
Confidence 3333333334433312 2 33567677774321000001 2234444 46789999764221 478899887 899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014631 401 SALEEGLGRIKAFCQRH 417 (421)
Q Consensus 401 e~l~~~~~~l~~~~~~~ 417 (421)
+++++++++|.+++.+.
T Consensus 995 ~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 995 ADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999999875
No 313
>PRK06149 hypothetical protein; Provisional
Probab=99.85 E-value=3.8e-18 Score=178.35 Aligned_cols=345 Identities=14% Similarity=0.112 Sum_probs=208.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC-CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC-YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
.|++++|+..|... ....+|.+.+++.+++.+..... | ......++.+.+++++ +...+.++++++|++
T Consensus 583 dG~~ylD~~~~~~~---lGh~hp~v~~Ai~~q~~~l~~~~~~-~~~~~~elae~L~~~~------p~~~~~v~f~~SGsE 652 (972)
T PRK06149 583 AGRSYLDMVNNVTV---LGHGHPRLAAAAARQWSLLNTNSRF-HYAAVAEFSERLAALA------PDGLDTVFLVNSGSE 652 (972)
T ss_pred CCCEEEECCCCccc---cCCCCHHHHHHHHHHHHhccccccc-cCHHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence 48899999876421 12478999999999998643211 2 1112234555555543 122468999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-----c--------eeEeeeccCC--CCcc-CC-----HHHHH
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-----L--------EIRHFDLLPE--KGWE-VD-----LDGLE 176 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~d-----~e~l~ 176 (421)
|+..+++... ...++|+..+.+|+++...+... + . .+..++.... ..+. .+ .++++
T Consensus 653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 732 (972)
T PRK06149 653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV 732 (972)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence 9999998432 12367888898999865433211 1 0 0112221110 0111 11 23333
Q ss_pred hhhc-----cCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 177 ALAD-----ENTVAMVIVNP-GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 177 ~~~~-----~~~~~i~~~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+.+. .+..+.+++.| +...| ...|++.++++.++|++||+++|+||+++++++.|..+..+..++...+++
T Consensus 733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv-- 810 (972)
T PRK06149 733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII-- 810 (972)
T ss_pred HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence 3221 23345567777 44445 457788899999999999999999999998877776443444344333333
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
+++|.+ ..|.++|+++++ +++++.+.... ..+.+.|+++++++.+.|+...++. ..+..+++.++
T Consensus 811 -t~gK~l-g~G~Pl~av~~~--------~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~ 877 (972)
T PRK06149 811 -TMAKGM-GNGHPLGAVITR--------REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEK---LQENARRVGDH 877 (972)
T ss_pred -Eecccc-cCCeeeEEEEEc--------HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 789996 467999999995 35777665321 2234788999999988887533322 22333333334
Q ss_pred HHHHh----hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631 328 CYDRI----KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I 398 (421)
Q Consensus 328 ~~~~l----~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~ 398 (421)
+++.| .+.|.+..+ . .-|+++.+++..... +.......+... +.++||.+.+... ..+.+|+.++ .
T Consensus 878 l~~~L~~l~~~~~~i~~v-r-G~Gl~~gvel~~~~~~~~~~~~~~~~i~~~-l~~~Gvl~~~~g~--~~~vl~~~Ppl~i 952 (972)
T PRK06149 878 LKARLEALADRHPLIGAV-H-GMGLYLGVELVRDRQTLEPATEETAAICDR-LLELGVIMQPTGD--HLNILKIKPPLCL 952 (972)
T ss_pred HHHHHHHHHHhCCCeEEE-e-ecceEEEEEEecCcccCCCChHHHHHHHHH-HHhCCeEEeecCC--CCCEEEEECCCcC
Confidence 44444 334433322 2 336677777732110 000012344444 4668999987421 1367999887 8
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 014631 399 EPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~~~ 416 (421)
+++++++++++|.+++.+
T Consensus 953 t~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 953 DRESADFFVDMLDRVLTE 970 (972)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999865
No 314
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.85 E-value=9.8e-18 Score=161.48 Aligned_cols=356 Identities=13% Similarity=0.097 Sum_probs=210.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEc-CCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLT-AGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~-~g~ 118 (421)
..|..++||..|.-.... ...+|.+.+++.+++.+... +....-..+.+..+++.+....+.... .+.++++ ++|
T Consensus 60 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SG 136 (464)
T PRK06938 60 VEGRQFIDCLAGAGTLAL-GHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPTG 136 (464)
T ss_pred CCCCEEEEccCCcccccc-CCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCCc
Confidence 348899999877544322 35788999999999875221 111011123444444444332221111 1357665 799
Q ss_pred HHHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC--cc--------CCHH
Q 014631 119 KQAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG--WE--------VDLD 173 (421)
Q Consensus 119 ~~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~--------~d~e 173 (421)
++|+..+++... ..| .+|+....+|+++...+..... ++..++.+.... ++ .+++
T Consensus 137 SEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 216 (464)
T PRK06938 137 TDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLH 216 (464)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHH
Confidence 999999998653 233 6889999999987654433211 122233221100 00 1356
Q ss_pred HHHhhhcc-----CceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631 174 GLEALADE-----NTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246 (421)
Q Consensus 174 ~l~~~~~~-----~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (421)
.+++.+.+ +..+.++..| +...|.+ .|++.++++.++|++||+++|.||+++++.+.|..+ ....++...++
T Consensus 217 ~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PDi 295 (464)
T PRK06938 217 YLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPDV 295 (464)
T ss_pred HHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCCE
Confidence 67776643 1345567777 5555765 568889999999999999999999999997777532 22333433334
Q ss_pred EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDT 324 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~ 324 (421)
+ +++|.++ .|+++|.+++++ ++ +.+... ...+.+.++++++++.+.|+...++.+ ++.++.-...
T Consensus 296 v---~~gKglg-gG~PlsAv~~~~--------~~-~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~~~~~~~G~~l 362 (464)
T PRK06938 296 V---VLSKAIG-GSLPLAVVVYRE--------WL-DTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLAEHAAAMGERL 362 (464)
T ss_pred E---Eeecccc-CCCceEEEeehh--------Hh-hccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4 5689964 689999999852 22 333222 223557889999999998875333322 2222222233
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCccc-ccC----CC-C---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-LEG----IS-D---DMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~----~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
++.+.+..+++|.+..+ . .-|++..+++.... ... .. + ...+.. .+.++|+.+.++..+ .+.+|+.
T Consensus 363 ~~~L~~l~~~~~~i~~V-r-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gll~~~~g~~--~~~l~~~ 437 (464)
T PRK06938 363 REHLRQLQRDYPQLGDV-R-GRGLMLGVEIVDPQGEPDALGHPPANGELASLIQR-ECLRRGLILELGGRH--GSVVRFL 437 (464)
T ss_pred HHHHHHHHHhCCCeeee-e-ccceEEEEEeccCcccccccccCCccHHHHHHHHH-HHHHCCeEEeecCCC--CCEEEEE
Confidence 33333322345433322 2 33567777774321 000 00 0 123344 446789999875322 3689998
Q ss_pred ec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 396 FA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 396 ~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++ .++++++++++++.+++++.-
T Consensus 438 Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 438 PPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHh
Confidence 76 799999999999999998754
No 315
>PRK07480 putative aminotransferase; Validated
Probab=99.85 E-value=3.7e-18 Score=164.25 Aligned_cols=354 Identities=15% Similarity=0.121 Sum_probs=209.5
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|.+++||..|...... ...+|.+.+++.+++++..... .......+.+..+++.+....+ ...+.++++++|++
T Consensus 47 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~SGse 122 (456)
T PRK07480 47 SEGNKILDGMAGLWCVNV-GYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNSGSE 122 (456)
T ss_pred CCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCCcHH
Confidence 458899999877533322 2568999999999998632110 0001123444445555544332 23468999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCC--CCccCC------
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPE--KGWEVD------ 171 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~--~~~~~d------ 171 (421)
|+..+++.... +| .+|+....+|++....+...+.. +..++.+.. ..+..+
T Consensus 123 A~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 202 (456)
T PRK07480 123 ANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGL 202 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHH
Confidence 99999876532 33 46888899999875433222211 111111000 000011
Q ss_pred --HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 172 --LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 172 --~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
.+.+++.+. ++..+.++..| +...|.. .|.+.++++.++|++||+++|+||+++++.+.|..+ ....++...
T Consensus 203 ~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv~P 281 (456)
T PRK07480 203 AAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFGIKP 281 (456)
T ss_pred HHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcCCCC
Confidence 255554442 23344556666 5556775 566779999999999999999999999987777543 222333332
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHh--h--h-cccccCCchHHHHHHHHHhhccchhH-HHHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIK--G--Y-LNISSGPATFVQGAVPQIFKNTKEDF-FSKI 317 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~--~--~-~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~ 317 (421)
+++ +++|.++ .| +++|.++++ +++++.+. . . ...+.+.++++++++.++|+...++. .++.
T Consensus 282 Div---~~gK~l~-gG~~Pi~av~~~--------~~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~~~~ 349 (456)
T PRK07480 282 DLM---TIAKGLT-SGYIPMGAVGVG--------DRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEGIVERV 349 (456)
T ss_pred Cee---eeehhhc-cCCccceEEEEc--------HHHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCCHHHHH
Confidence 333 6789954 56 489999985 35666662 1 1 12356788999999999887533322 2222
Q ss_pred -HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCC---hHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 318 -VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISD---DMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 318 -~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
.+.-...++.+.+ +.+.|.+..+ . .-|++..+++..... ....+ ....+...+.++||.+.+. .+.
T Consensus 350 ~~~~g~~l~~~l~~-l~~~~~i~~v-r-G~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~-----~~~ 421 (456)
T PRK07480 350 RDDTGPYLQKRLRE-LADHPLVGEV-R-GVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV-----GDR 421 (456)
T ss_pred HHHHHHHHHHHHHH-hhcCCCeeeE-E-eecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec-----CCE
Confidence 1222333333333 3444333212 2 235666677742210 00001 1123334456789999763 257
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+|++++ .++++|++++++|.+++.++.+
T Consensus 422 l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 422 MIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999988 5999999999999999987643
No 316
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.84 E-value=2.9e-20 Score=163.10 Aligned_cols=290 Identities=16% Similarity=0.209 Sum_probs=185.3
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC----C--CeEEEcCCCCcchHHHHhhcCceeEee
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP----G--ANILLPKPGFPLYEANARHTRLEIRHF 160 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~----g--d~Vl~~~p~y~~~~~~~~~~g~~~~~~ 160 (421)
-.++|++.|.++...-.+..++...|++++|+|+.+++++.+|... + -+|+...|.|+.|........-.....
T Consensus 44 ~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w 123 (363)
T PF04864_consen 44 ISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKW 123 (363)
T ss_dssp S-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEE
T ss_pred ccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCccc
Confidence 3589999999988776665566678999999999999999998532 1 379999999999987776554332222
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
.-+. ..|. ..-...+-+=++++||||.|.+ .+.++ +.-+..+|.|-+|..-.| .++...
T Consensus 124 ~Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhy-----TpI~~~ 182 (363)
T PF04864_consen 124 AGDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHY-----TPITAP 182 (363)
T ss_dssp EEEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTT-----S---S-
T ss_pred cccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeecccc-----cccCCC
Confidence 2111 1121 1001223344899999999998 55444 355667899999987333 333332
Q ss_pred CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccch--------
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKE-------- 311 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~-------- 311 (421)
. +..|.+.|+||.-|-+|.|+||.++.| +++.+++..+... +.+.+.-+|.-+.+.|+...+
T Consensus 183 a--D~DiMLFT~SK~TGHAGSR~GWAlVKD-------~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~ 253 (363)
T PF04864_consen 183 A--DHDIMLFTLSKLTGHAGSRFGWALVKD-------EEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGT 253 (363)
T ss_dssp B----SEEEEEHHHHCS-GGG-EEEEEES--------HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTT
T ss_pred C--CCceEEEEEecccCccccccceeeecC-------HHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCc
Confidence 2 223888899999899999999999975 5688888887653 457888888888777764221
Q ss_pred -hHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CC-----------CceeEEEEecCcccccCCCChHHHHHHHHhhcCe
Q 014631 312 -DFFSKIVDILRDTADICYDRIKEIPCITCPR-KP-----------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV 378 (421)
Q Consensus 312 -~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv 378 (421)
..+.--.+.++++-+.+.+.++.-..+.+.. .| ...-|.|++++.. ....|...+++.||
T Consensus 254 ~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~e-------ed~DC~~~l~~~~I 326 (363)
T PF04864_consen 254 EDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCERE-------EDEDCYAVLREAKI 326 (363)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSC-------GGSSHHHHHHCTTE
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCc-------ccccHHHHHHhCCc
Confidence 2445556788899999999987642232111 11 1245999999753 22346677889999
Q ss_pred eEEeCCCCCC-CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 379 IVLPGMAVGM-KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 379 ~v~~g~~~~~-~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
.-+.|..|+. ..++|+|+-.++++++.++++|...
T Consensus 327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999987 5799999999999999999998753
No 317
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.84 E-value=2e-18 Score=152.74 Aligned_cols=341 Identities=18% Similarity=0.160 Sum_probs=222.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc--CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS--AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
+|++++|+..|..+...+ ..+|.+.+++.+++.. +....|.... .-++.+++++.+ +.+-..++|+++|+
T Consensus 48 ~G~ryLD~f~Gi~tvslG-HchP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vfF~nsGs 119 (442)
T KOG1404|consen 48 EGRRYLDAFGGIVTVSLG-HCHPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKL------PGDLKVVFFVNSGS 119 (442)
T ss_pred CCceeehhhCCeEEEEcC-CCChHHHHHHHHhhhhhEEeeccccCCc-HHHHHHHHHHhC------CCCceEEEEecCCc
Confidence 488899998887554333 6889999999999864 2333554332 467888888877 44556799999999
Q ss_pred HHHHHHHHHhc-CCC-CeEEEcCCCCcchHHHHhhc-CceeEeeec-----------cCC--CC-ccC---------CHH
Q 014631 120 QAIQVILTVLA-RPG-ANILLPKPGFPLYEANARHT-RLEIRHFDL-----------LPE--KG-WEV---------DLD 173 (421)
Q Consensus 120 ~al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~-----------~~~--~~-~~~---------d~e 173 (421)
+|++++++... .-| -.|+....+|++....+... +......+. .|+ .+ |+= -.+
T Consensus 120 EANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~ 199 (442)
T KOG1404|consen 120 EANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAK 199 (442)
T ss_pred hHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHH
Confidence 99999887643 222 36777777888765444322 222221111 010 00 110 123
Q ss_pred HHHhhh---ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 174 GLEALA---DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 174 ~l~~~~---~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
++++.+ .+.+.+.++..+ +...|++ +++..+++..++|+++|.++|.||++++|.+.| .++.+...+.. =-
T Consensus 200 ~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v~---PD 275 (442)
T KOG1404|consen 200 ELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGVV---PD 275 (442)
T ss_pred HHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCCC---cc
Confidence 444433 345566677777 5556765 788999999999999999999999999999888 55555554432 23
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTAD 326 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 326 (421)
+-|++|.+ ..|+++|.++++ +++++-+.+.. . .+.+.++++++++.++|+...++.+.+ ...+...
T Consensus 276 IvTmAKgi-GnG~Pl~AVvtt--------~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE---~aa~vG~ 343 (442)
T KOG1404|consen 276 IVTMAKGI-GNGFPLGAVVTT--------PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQE---NAAEVGS 343 (442)
T ss_pred HHHHHhhc-cCCCcceeeecC--------HHHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHH---HHHHHHH
Confidence 45899995 678999999985 57888777665 2 356889999999988887644444433 3344444
Q ss_pred HHHHHhhc----CCCccccCCCCceeEEEEecCcccccCC---CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--
Q 014631 327 ICYDRIKE----IPCITCPRKPEGSMFVMVKLNLSLLEGI---SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-- 397 (421)
Q Consensus 327 ~~~~~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-- 397 (421)
++.+.|.+ +|-+..+ ..-|.++.+++-....+.. ..-..++.+.+++.|+.|.-|..++ +.+||++.
T Consensus 344 yl~~~l~~l~d~h~iIGdV--RG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G--~vfriaPPlc 419 (442)
T KOG1404|consen 344 YLLEKLAALKDKHPIIGDV--RGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHG--NVFRIAPPLC 419 (442)
T ss_pred HHHHHHHHHhhcCCceeec--ccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccc--eEEEecCCee
Confidence 55555543 3444322 2336777777644321111 1123455666789999997776655 38999987
Q ss_pred CCHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRI 410 (421)
Q Consensus 398 ~~~e~l~~~~~~l 410 (421)
.|+||++.+++..
T Consensus 420 iT~edi~f~~~~~ 432 (442)
T KOG1404|consen 420 ITKEDIDFAVEYF 432 (442)
T ss_pred ccHHHHHHHHHHH
Confidence 7999997777654
No 318
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=6.8e-18 Score=161.84 Aligned_cols=343 Identities=16% Similarity=0.093 Sum_probs=206.1
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|.-.... ...+|.+.+++.+++.+.....+ + .+.+..+++.+.+..+ ..+.++++++|++
T Consensus 50 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~~~~~-~----~~~~~~la~~l~~~~p---~~~~v~f~~sGse 120 (428)
T PRK12389 50 VDGNKYIDYLAAYGPIIT-GHAHPHITKAITEAAENGVLYGT-P----TELEIEFAKMLKEAIP---SLEKVRFVNSGTE 120 (428)
T ss_pred CCCCEEEEcccccccccc-CCCCHHHHHHHHHHHHhCCccCC-C----CHHHHHHHHHHHHhCC---CCcEEEEeCCHHH
Confidence 348899999877544322 35789999999999987432122 2 2334455555544332 2468999999999
Q ss_pred HHHHHHHHhcC-CC-CeEEEcCCCCcchHHHHhhc-CceeEe--------eeccCCCC-c---cCCHHHHHhhhcc--Cc
Q 014631 121 AIQVILTVLAR-PG-ANILLPKPGFPLYEANARHT-RLEIRH--------FDLLPEKG-W---EVDLDGLEALADE--NT 183 (421)
Q Consensus 121 al~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~~~~-g~~~~~--------~~~~~~~~-~---~~d~e~l~~~~~~--~~ 183 (421)
|+..+++.... .| .+|+....+|++....+... |..... ++.....+ . --|++.+++.+.. +.
T Consensus 121 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 200 (428)
T PRK12389 121 AVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDE 200 (428)
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCc
Confidence 99999986532 23 67888899999876544332 211100 00000000 0 0167888877742 23
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631 184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261 (421)
Q Consensus 184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 261 (421)
.+.++..| +...|.+. +++.+++|.++|++||+++|+||+++++ +.+... ....++...++ .+++|.+ ..|+
T Consensus 201 vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~-Rt~~~~-a~~~~gv~PDi---vt~gK~l-ggG~ 274 (428)
T PRK12389 201 VAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGG-AQDLLGVEPDL---TALGKII-GGGL 274 (428)
T ss_pred EEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEcccccc-ccCcch-hhHHhCCCCCe---eeechhh-cCCC
Confidence 44556666 66678654 6788999999999999999999999987 333221 11112222223 3789996 5679
Q ss_pred eEEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc---
Q 014631 262 RLGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE--- 334 (421)
Q Consensus 262 r~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~--- 334 (421)
++|.++++ +++++.+... ...+.+.|+++.+++.+.|+...++ +..++.+++.+++.+.|++
T Consensus 275 Pi~av~~~--------~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~ 343 (428)
T PRK12389 275 PIGAYGGR--------KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAE 343 (428)
T ss_pred ceeEEeEH--------HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHH
Confidence 99999884 4677766421 1234578899999988888753322 2333444445555554443
Q ss_pred -CCCccccCCCCceeEEEEecCcccccC-----CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHH
Q 014631 335 -IPCITCPRKPEGSMFVMVKLNLSLLEG-----ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEE 405 (421)
Q Consensus 335 -~~g~~~~~~~~~~~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~ 405 (421)
+|.+..+ ....|+ +.+.+....... ..+ ...+.. .+.++||.+.+.. .+.+.+++..+++++++
T Consensus 344 ~~~~~~~v-~r~~g~-~gi~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~Gv~~~~~~----~~~~~~~l~~t~e~id~ 416 (428)
T PRK12389 344 KHGITITI-NRLKGA-LTVYFTDEKVTNYDQAERSDGEAFGKFFK-LMLNQGINLAPSK----YEAWFLTTAHTEEDIEE 416 (428)
T ss_pred hCCCCEEE-EecCcE-EEEEEeCCCCCChhhhcccCHHHHHHHHH-HHHHCCcEeecCC----CCCeeecCCCCHHHHHH
Confidence 4322112 122233 334443211000 001 123444 4567899998752 12345666689999999
Q ss_pred HHHHHHHHHHH
Q 014631 406 GLGRIKAFCQR 416 (421)
Q Consensus 406 ~~~~l~~~~~~ 416 (421)
+++++.+++++
T Consensus 417 ~~~~l~~~l~~ 427 (428)
T PRK12389 417 TLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHh
Confidence 99999999865
No 319
>PLN03032 serine decarboxylase; Provisional
Probab=99.84 E-value=6.3e-18 Score=157.16 Aligned_cols=286 Identities=16% Similarity=0.093 Sum_probs=194.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
..++++.+.+++.+.+| .+++++ ++|+|||+++...+.... .++..|+++.-.|++....++.+|.++..+|++
T Consensus 64 a~~~e~~v~~~ia~llg--~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d 141 (374)
T PLN03032 64 SRQFEVGVLDWFARLWE--LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTL 141 (374)
T ss_pred HHHHHHHHHHHHHHHhC--CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeC
Confidence 46778888888877776 455666 999999999998876643 245689999999999999999999998888875
Q ss_pred CCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-----cEEEEcccccccccCC-CCc
Q 014631 164 PEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-----IMVISDEVYDHLTFGS-TPY 234 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~De~~~~~~~~~-~~~ 234 (421)
+ ++.+|+++|++.+++ ++.+++++..+|+||.+ +++++|+++|+++| +++++|.+|+++...- ...
T Consensus 142 ~--~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~i---dpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~ 216 (374)
T PLN03032 142 P--SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAV---DDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRA 216 (374)
T ss_pred C--CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccC---CCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCC
Confidence 4 446999999999876 35677788889999999 77899999999996 5899999998743210 000
Q ss_pred ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--------cccCCchHHHHHHHHHh
Q 014631 235 VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--------ISSGPATFVQGAVPQIF 306 (421)
Q Consensus 235 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l 306 (421)
..+ .+... -.-+..|.||.++ ....+|++++++. ..+.+..... ..++-+......+...|
T Consensus 217 ~~~-~~~~~-vDSis~s~HK~~g-~P~g~G~ll~r~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l 285 (374)
T PLN03032 217 PEV-TFRKP-IGSVSVSGHKFLG-CPMPCGVALTRKK--------HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTL 285 (374)
T ss_pred ccc-CCCcC-CcEEEECcccccC-CCcCeEEEEEEch--------hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHH
Confidence 001 11111 1134558999954 3455899999742 2333322111 11122223444555556
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC
Q 014631 307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
.....+++.+..++..++.+++.+.|++. ++.++..|... .+.++-+ ... .+. +|..+.+-
T Consensus 286 ~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~-~V~f~~~--------~~~----~~~--~~w~l~~~--- 346 (374)
T PLN03032 286 RRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSS-TVVFERP--------MDE----AFI--KKWQLACE--- 346 (374)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCce-EEEEcCC--------CcH----hHh--heeeeccc---
Confidence 65567888999999999999999999986 77655556533 3333332 111 122 35555431
Q ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 387 GMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
++.+|+++. ++++.++++++.|++
T Consensus 347 --~~~~hi~vm~~~~~~~id~fi~dl~~ 372 (374)
T PLN03032 347 --GDIAHVVVMPNVTVEKLDEFVEELVE 372 (374)
T ss_pred --CCEEEEEECCCCCHHHHHHHHHHHhc
Confidence 358999986 678999999998875
No 320
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.84 E-value=9.6e-18 Score=156.13 Aligned_cols=325 Identities=16% Similarity=0.139 Sum_probs=210.0
Q ss_pred HHHHHH-HHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014631 64 PVAADA-VVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG 142 (421)
Q Consensus 64 ~~v~~a-~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~ 142 (421)
..+.++ +....... ..|..+..+.+|++.++++++ .+.++.|++|+.|++++....++|||.| +.+.
T Consensus 50 ~aMs~~q~a~~~~GD--e~yag~~s~~~lE~~va~~~G--------~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~ 117 (450)
T TIGR02618 50 NAMSDKQWAGLMMGD--EAYAGSRNFYHLERTVRELYG--------FKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM 117 (450)
T ss_pred HHHHHHHHHHhhhcc--hhhcCCCcHHHHHHHHHHHHC--------CCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence 344444 44443332 258877888999999999984 4579999999999998877778999977 6677
Q ss_pred Ccch-HHHHhhcCceeEeeeccC--------CCCccCCHHHHHhhhcc----CceEEEEeCCCCC-cccccCHHHHHHHH
Q 014631 143 FPLY-EANARHTRLEIRHFDLLP--------EKGWEVDLDGLEALADE----NTVAMVIVNPGNP-CGNVFTYQQLQKIA 208 (421)
Q Consensus 143 y~~~-~~~~~~~g~~~~~~~~~~--------~~~~~~d~e~l~~~~~~----~~~~i~~~~p~np-tG~~~~~~~l~~i~ 208 (421)
|... .......|+.++.++.+. ...+.+|++++++.+++ +++.+.+.+++|. .|..+|.++++++.
T Consensus 118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 7544 444677888666554331 22467899999999875 3346778888875 58999999999999
Q ss_pred HHHHhcCcEEEEcccccccc--c-----CCCCcccc----cccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcchh
Q 014631 209 EKARKLGIMVISDEVYDHLT--F-----GSTPYVRM----GVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 209 ~~~~~~~~~li~De~~~~~~--~-----~~~~~~~~----~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~ 276 (421)
++|++||+.+|.|.++.... + .|-...++ ..+-.... .+..|..|.++.+ | |+++.++
T Consensus 198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD-~~~~S~~Kd~~~~~G---G~l~~~d------ 267 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD-GCTMSGKKDCLVNIG---GFLCMND------ 267 (450)
T ss_pred HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc-EEEEeeccCCCCCCc---eEEEeCC------
Confidence 99999999999999987621 1 01111122 11111111 4677889997666 4 6666554
Q ss_pred HHHHHHHHhhhccccc------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEE
Q 014631 277 ELRIVDSIKGYLNISS------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFV 350 (421)
Q Consensus 277 ~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 350 (421)
+++.++++.....+. ..+.-...++...|.+..+. ...++-....+++.+.|.+. |+.+ ..|.+|..+
T Consensus 268 -~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~---~y~~~r~~~a~~La~~L~~~-Gvpv-~~p~ggh~V 341 (450)
T TIGR02618 268 -DEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDY---EYIEHRVKQVRYLGDKLKAA-GVPI-VEPVGGHAV 341 (450)
T ss_pred -HHHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHC-CCcc-cCCCCcceE
Confidence 457777766642211 11222223333334321111 22223334577788888887 8884 478888888
Q ss_pred EEecCcc--ccc-CCCChHHHHHHHHhhcCeeEE-eCCCC-CC-----------CCeEEEEec---CCHHHHHHHHHHHH
Q 014631 351 MVKLNLS--LLE-GISDDMEFALQLAKEESVIVL-PGMAV-GM-----------KNWLRITFA---IEPSALEEGLGRIK 411 (421)
Q Consensus 351 ~~~~~~~--~~~-~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~iRi~~~---~~~e~l~~~~~~l~ 411 (421)
+++.... .++ .......++.+|..+.||--. -|+.. +. -.-+|+++. .|.+.++.+.++|.
T Consensus 342 ~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~ 421 (450)
T TIGR02618 342 FLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGII 421 (450)
T ss_pred EEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHHHHHH
Confidence 8865431 011 111356788888888888543 23321 11 146999998 68899999999998
Q ss_pred HHHHH
Q 014631 412 AFCQR 416 (421)
Q Consensus 412 ~~~~~ 416 (421)
.+.++
T Consensus 422 ~~~~~ 426 (450)
T TIGR02618 422 KLYKH 426 (450)
T ss_pred HHHhh
Confidence 88755
No 321
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.84 E-value=6.7e-18 Score=162.29 Aligned_cols=342 Identities=14% Similarity=0.099 Sum_probs=204.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..+|||..|...... ...+|.+.+++.+++++.. .+... .+.+..+++.+.+..+ ..+.+.++++|++|
T Consensus 97 dG~~yiD~~~g~g~~~l-Gh~~p~v~~av~~ql~~~~--~~~~~---~~~~~~lAe~l~~~~p---~~~~v~f~~SGsEA 167 (474)
T PLN02482 97 DGNEYIDYVGSWGPAII-GHADDEVLAALAETMKKGT--SFGAP---CLLENVLAEMVIDAVP---SVEMVRFVNSGTEA 167 (474)
T ss_pred CCCEEEEeccccccccc-CCCCHHHHHHHHHHHhhCC--CCCCC---CHHHHHHHHHHHHhCC---CCCEEEEeCChHHH
Confidence 47888999777543322 3578999999999998753 23221 2555566666655443 24799999999999
Q ss_pred HHHHHHHhcC-CC-CeEEEcCCCCcchHHHH-hhc--Ccee------EeeeccCC-----CCccCCHHHHHhhhcc--Cc
Q 014631 122 IQVILTVLAR-PG-ANILLPKPGFPLYEANA-RHT--RLEI------RHFDLLPE-----KGWEVDLDGLEALADE--NT 183 (421)
Q Consensus 122 l~~~~~~l~~-~g-d~Vl~~~p~y~~~~~~~-~~~--g~~~------~~~~~~~~-----~~~~~d~e~l~~~~~~--~~ 183 (421)
+..+++.... .| ++|+....+|+++.... ... +... ..++.... -.++ |++.+++.+.. +.
T Consensus 168 ~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~n-d~~~l~~~l~~~~~~ 246 (474)
T PLN02482 168 CMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYN-DLEAVKKLFEANKGE 246 (474)
T ss_pred HHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCC-ChHHHHHHHHhCCCc
Confidence 9999986531 23 68888899999975321 111 0000 00000000 0111 67888887743 33
Q ss_pred eEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631 184 VAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261 (421)
Q Consensus 184 ~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 261 (421)
.+.++..| ....|.+. +++.++++.++|++||+++|+||++.++ +.|... ....++...++ .+++|.++ .|+
T Consensus 247 iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~g-a~~~~gv~PDi---~t~gK~lg-gG~ 320 (474)
T PLN02482 247 IAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGG-AQEYFGITPDL---TTLGKVIG-GGL 320 (474)
T ss_pred eEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcch-HhHHhCCCCCE---EEecchhh-CCC
Confidence 45566777 55677665 4688999999999999999999999887 444322 22223322223 37899965 789
Q ss_pred eEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--
Q 014631 262 RLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI-- 335 (421)
Q Consensus 262 r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-- 335 (421)
++|.++++ +++++.+.... ..+.+.+++..+++.++|+...+ ++..++++++.+++.+.|.++
T Consensus 321 Pigav~g~--------~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~~ 389 (474)
T PLN02482 321 PVGAYGGR--------REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAGK 389 (474)
T ss_pred ceEEEEEc--------HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999875 46777765321 12445788888888888875322 123444444455555555432
Q ss_pred -CCccccCCCCceeEEEEecCccccc---C--CCC---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631 336 -PCITCPRKPEGSMFVMVKLNLSLLE---G--ISD---DMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG 406 (421)
Q Consensus 336 -~g~~~~~~~~~~~~~~~~~~~~~~~---~--~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~ 406 (421)
-++.+.....++++ .+.+...... + ..+ ...+... +.++||++.|.... .+ -+++.++++||+++
T Consensus 390 ~~g~~~~~~~v~g~~-gi~f~~~~~~~~~~~~~~d~~~~~~~~~~-l~~~Gv~~~~~~~~---~~-~psl~ht~~dId~~ 463 (474)
T PLN02482 390 KAGHEMCGGYISGMF-GFFFTEGPVYNFADAKKSDTAKFARFHRG-MLEEGVYLAPSQFE---AG-FTSLAHTEEDIDFT 463 (474)
T ss_pred hcCCCEEEcccceEE-EEEEecCCccChhhhccCCHHHHHHHHHH-HHHCCeEEeccCCC---CC-cCCCCCCHHHHHHH
Confidence 02221112223433 2333211000 0 001 1244444 45689999874321 11 14556899999999
Q ss_pred HHHHHHHHHH
Q 014631 407 LGRIKAFCQR 416 (421)
Q Consensus 407 ~~~l~~~~~~ 416 (421)
++++.+++.+
T Consensus 464 l~al~~~l~~ 473 (474)
T PLN02482 464 IAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 322
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.84 E-value=6e-18 Score=161.86 Aligned_cols=341 Identities=14% Similarity=0.128 Sum_probs=209.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|++++||..|......+ ..+|.+.+++.+++++.......... .+....+++.+.+..+ ..-+.++++++|++
T Consensus 42 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~ai~~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~--~~~~~v~f~~sGse 116 (427)
T TIGR00508 42 DDGRRLIDGMSSWWAAIHG-YNHPRLNAAAQKQIDKMSHVMFGGFT--HKPAIELCQKLVKMTP--NALDCVFLADSGSV 116 (427)
T ss_pred CCCCEEEEccchHHHhcCC-CCCHHHHHHHHHHHHhcCCccccccC--CHHHHHHHHHHHhhCC--CCCCEEEEeCCcHH
Confidence 3488999998875443333 67899999999998873211111111 1223334444433222 22368999999999
Q ss_pred HHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhc-Cce-------------eEeeeccCCCCcc-----CCHH
Q 014631 121 AIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHT-RLE-------------IRHFDLLPEKGWE-----VDLD 173 (421)
Q Consensus 121 al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~d~e 173 (421)
|+..+++.... +| .+|+....+|++....+... +.. ...++. +...+. -|++
T Consensus 117 A~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~ 195 (427)
T TIGR00508 117 AVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAIT 195 (427)
T ss_pred HHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHHH
Confidence 99999876431 23 67999999999875444332 211 011111 101110 1456
Q ss_pred HHHhhhcc--CceEEEEeCC--CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 174 GLEALADE--NTVAMVIVNP--GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 174 ~l~~~~~~--~~~~i~~~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
++++.+.. +..+.+++.| +.-.|.. .+.+.+++|.++|++||+++|+||++.++++.|..+.. ..++....++
T Consensus 196 ~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pDi~- 273 (427)
T TIGR00508 196 PLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPDIL- 273 (427)
T ss_pred HHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCCEE-
Confidence 66666532 2345566666 5555654 57899999999999999999999999887766654322 1222222233
Q ss_pred EcccccccCCCCc-eEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGW-RLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 249 ~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
+++|.+ .+|+ .++.++++ +++++.+... ...+...+++..+++.++|+...+. +..++.
T Consensus 274 --~~gK~l-~gG~~p~~a~~~~--------~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~~ 339 (427)
T TIGR00508 274 --CVGKAL-TGGYMTLSATVTT--------DKVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQV 339 (427)
T ss_pred --Eechhh-hcCcccceEEEEc--------HHHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHHH
Confidence 479997 5674 78888874 3566766542 1123356788888888888642221 234566
Q ss_pred HHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631 322 RDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA- 397 (421)
Q Consensus 322 ~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~- 397 (421)
+++.+++.+.|+++ +.+..+ ...|.+..+.+... .....+... +.++||.+.+.. ..+|++++
T Consensus 340 ~~~~~~l~~~L~~l~~~~~i~~v--rg~G~~~~i~~~~~-----~~~~~~~~~-l~~~Gv~~~~~~-----~~l~~~ppl 406 (427)
T TIGR00508 340 SAIENQLKRELSPLRKNPVVKDV--RVLGAIGVVEMYKP-----VNVEELQKK-FVEQGVWIRPFG-----KLIYVMPPY 406 (427)
T ss_pred HHHHHHHHHHHHHhhcCCCEEeE--eccccEEEEEECCc-----cCHHHHHHH-HHHCCeEEEecC-----CEEEEECCC
Confidence 66666677766654 222101 11255666666431 124455555 467799997642 47999887
Q ss_pred -CCHHHHHHHHHHHHHHHHH
Q 014631 398 -IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~~~ 416 (421)
+++++|++++++|.+++++
T Consensus 407 ~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 407 IITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 8999999999999999864
No 323
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.84 E-value=5e-18 Score=161.85 Aligned_cols=348 Identities=13% Similarity=0.062 Sum_probs=205.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|..++|+..|...... ...+|.+.+++.+++.+.. .+... .+.+..+++.+.+..+ ...+.++++++|++
T Consensus 50 ~dG~~yiD~~~g~~~~~l-Gh~~p~v~~ai~~q~~~~~--~~~~~---~~~~~~la~~L~~~~~--~~~~~v~f~~SGsE 121 (433)
T PRK00615 50 SLGKTFIDFCGSWGSLIH-GHSHPKICDAIQQGAERGT--SYGLT---SEQEILFAEELFSYLG--LEDHKIRFVSSGTE 121 (433)
T ss_pred CCCCEEEEcccchhcccc-CCCCHHHHHHHHHHHHhCC--CCCCC---CHHHHHHHHHHHHhCC--CCcCEEEEeCchHH
Confidence 358899999887544322 3578999999999998743 22111 2333444444444332 22368999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEEcCCCCcchHH---HHhhcCcee-----EeeeccCC-C-----CccCCHHHHHhhhcc--C
Q 014631 121 AIQVILTVLA-RPG-ANILLPKPGFPLYEA---NARHTRLEI-----RHFDLLPE-K-----GWEVDLDGLEALADE--N 182 (421)
Q Consensus 121 al~~~~~~l~-~~g-d~Vl~~~p~y~~~~~---~~~~~g~~~-----~~~~~~~~-~-----~~~~d~e~l~~~~~~--~ 182 (421)
|+..+++... ..| .+|+....+|+++.. .+...+... ......+. . .+ -|++++++.+.. +
T Consensus 122 A~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~d~~~l~~~l~~~~~ 200 (433)
T PRK00615 122 ATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPY-NDFQIFQTVMNSLGH 200 (433)
T ss_pred HHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCC-CCHHHHHHHHHhcCC
Confidence 9999998653 234 578888999998641 121111100 00000000 0 01 167788877642 2
Q ss_pred ceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 183 TVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 183 ~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
..+.+++.| ....|... +++.+++|.++|++||+++|+||++.++ +.|... ....++....++ +++|.++ .|
T Consensus 201 ~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g-a~~~~gv~PDi~---~~gK~lg-gG 274 (433)
T PRK00615 201 RVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG-AAAIYHVKPDIT---VYGKILG-GG 274 (433)
T ss_pred ceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH-HHHhcCCCCCeE---EEccccc-CC
Confidence 334556666 55567654 5678999999999999999999999877 444322 222222222233 5899964 56
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+++++ +++++.+.... ..+.+.+++..+++.++|+...+ ...++..+.-...++.+.+.+.+.
T Consensus 275 ~p~~av~~~--------~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~ 346 (433)
T PRK00615 275 LPAAAVVAH--------KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYTQLSTLEQNFLSPIEEMIRSQ 346 (433)
T ss_pred cceeeeeec--------HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 889999985 36777664321 12345688888888888875332 223333333333333334444432
Q ss_pred CCccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGL 407 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~ 407 (421)
++.+.... .|.++.+.+...... .......+...+ .++||++.|..... + =+|..+++++|++++
T Consensus 347 -g~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~---~-~ls~~ht~~did~~~ 419 (433)
T PRK00615 347 -GFPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFEA---S-FLSSAHSMENLDYAQ 419 (433)
T ss_pred -CCCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCccccc---c-ceecCCCHHHHHHHH
Confidence 33211112 455666666432100 000012445444 56799998754211 1 356668999999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
+++.+++++.-
T Consensus 420 ~a~~~~~~~~~ 430 (433)
T PRK00615 420 NVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHh
Confidence 99999998753
No 324
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=3.1e-17 Score=146.22 Aligned_cols=339 Identities=17% Similarity=0.136 Sum_probs=231.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
.++.|+|=... | -..+.+.+++-..+.+... ..|+.+.-..+++....+..++.|| ++-.++--.+
T Consensus 25 q~~~ieLIASE-----N-~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFg--a~~anVQPhS 96 (413)
T COG0112 25 QREHIELIASE-----N-FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFG--AEYANVQPHS 96 (413)
T ss_pred Hhhceeeeecc-----c-cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhC--CCccccCCCC
Confidence 34666764332 1 3567888888777765221 2455666678888888888888887 3445555544
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcC--ceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTR--LEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~ 190 (421)
|++|+..++.+|++|||+|+..+-.+.++.... ...| .+.+.+++++++ ..+|.|++++...+ ++|.|+.-.
T Consensus 97 -Gs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et-~~IDyD~~~k~a~e~kPK~ii~G~ 174 (413)
T COG0112 97 -GSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPET-GLIDYDEVEKLAKEVKPKLIIAGG 174 (413)
T ss_pred -chHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEeccccccc-CccCHHHHHHHHHHhCCCEEEECc
Confidence 566888888899999999999887776653322 1222 456677776543 46999999996654 667665322
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
-..|- . -+++++.++|.+-|.++++|.+|. ++.-+|..+.|+...+ ++.+|.||+ ++|.|-|.+++.
T Consensus 175 SaY~r--~---id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~Ad-----vVTtTTHKT--lrGPrGG~Il~~ 242 (413)
T COG0112 175 SAYSR--P---IDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPHAD-----VVTTTTHKT--LRGPRGGIILTN 242 (413)
T ss_pred ccccc--c---cCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCccc-----eEeCCcccC--CCCCCceEEEec
Confidence 22221 2 458999999999999999999994 4555555554544422 788999999 478889999986
Q ss_pred CCCcchhHHHHHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 270 DPSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+ .++.+++....... ++|.....++.+-++....+..+++.+++.-++...+.+.|.+. |++++.....+
T Consensus 243 ~-------eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdn 314 (413)
T COG0112 243 D-------EELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDN 314 (413)
T ss_pred c-------HHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccc
Confidence 4 46888887765432 34444444444445554456778889999999999999999987 98866445556
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC-CC-----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA-VG-----MKNWLRITFA------IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~~-----~~~~iRi~~~------~~~e~l~~~~~~l~~~~~ 415 (421)
..+.+++.... -....+..+|.+.||.+.--.. |. .+..|||... ..+++++++.+.|.+++.
T Consensus 315 Hl~lVDl~~~~-----~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~ 389 (413)
T COG0112 315 HLVLVDLRSKG-----LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLD 389 (413)
T ss_pred eEEEEEcccCC-----CCHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHh
Confidence 66777776321 1345567788999999864322 22 2578999865 346899999998888876
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
.
T Consensus 390 ~ 390 (413)
T COG0112 390 G 390 (413)
T ss_pred c
Confidence 4
No 325
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.83 E-value=1.3e-17 Score=143.22 Aligned_cols=296 Identities=16% Similarity=0.144 Sum_probs=212.8
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeeccCCC
Q 014631 89 LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLLPEK 166 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~ 166 (421)
.++++-+..-++ ..++.-.++..+|+.+++.++-.++.|||+|++...+-.+ +...++..|+++.+++.+.
T Consensus 53 ~~v~egikyVFk-----T~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~-- 125 (385)
T KOG2862|consen 53 DEVLEGIKYVFK-----TANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADI-- 125 (385)
T ss_pred HHHHHHHHHHhc-----cCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHHHHHHHHhhCceeeEEecCc--
Confidence 344444444442 2345566777889999999999999999999998766554 3677889999999997654
Q ss_pred CccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 167 GWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 167 ~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
+....+|++.+.+.+ +++++++++....||+. ++ +..+.++|++|+.++++|.+-+.. |.++ .+..++.
T Consensus 126 G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~---q~~~~~~g~lc~k~~~lllVD~VaSlg---gt~F-~mDewgV-- 196 (385)
T KOG2862|consen 126 GQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVL---QDLLAISGELCHKHEALLLVDTVASLG---GTEF-EMDEWGV-- 196 (385)
T ss_pred ccCccHHHHHHHHHhcCCceEEEEecCcccccc---chHHHHHHHHhhcCCeEEEEechhhcC---Cccc-eehhhcc--
Confidence 345899999888765 56888999998899999 56 777889999999999999998762 3332 3333333
Q ss_pred CEEEEcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc------------------------cccCCchHHH
Q 014631 245 PVITLGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN------------------------ISSGPATFVQ 299 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~ 299 (421)
.+......|.++.| | ++.+..++ ...++++..++ +..+++....
T Consensus 197 -DvaytgSQKaL~aP~G--LsiisfS~--------ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~ll 265 (385)
T KOG2862|consen 197 -DVAYTGSQKALGAPAG--LSIISFSD--------KALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLL 265 (385)
T ss_pred -cEEEecchhhcCCCCC--cceeecCH--------HHHHHHhhccCCceEEEEeHHhhcchhccCCcccccccCCcHHHH
Confidence 25555667998764 4 44455442 23333332211 2236677788
Q ss_pred HHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC-CCC--ceeEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631 300 GAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR-KPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEE 376 (421)
Q Consensus 300 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 376 (421)
+++.++|....++++++..++.+++.++++..|+++ |++... .++ ..-...+.+|.. .|..+++..+..++
T Consensus 266 y~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvttv~vp~g-----vDw~dVv~~~~~~~ 339 (385)
T KOG2862|consen 266 YSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTTVKVPYG-----VDWKDVVAYAMSHY 339 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCcceeeecCCC-----CCHHHHHHHHHHhc
Confidence 888889887778999999999999999999999987 665321 221 111233344432 36778888887877
Q ss_pred CeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631 377 SVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 377 gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~ 417 (421)
++.+..|.....++.+||.+. .+.+.++..++.|+..+++-
T Consensus 340 ~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 340 VVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred CEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 888887777777899999974 46799999999999988654
No 326
>PLN02271 serine hydroxymethyltransferase
Probab=99.83 E-value=1.9e-17 Score=156.93 Aligned_cols=346 Identities=13% Similarity=0.033 Sum_probs=227.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSP--DDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~ 115 (421)
..-|+|--.. -...+.+.+++...+.+....+ |+....+.+++....+...+.|+..... .+|...
T Consensus 148 ~~~l~LIASE------N~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~ 221 (586)
T PLN02271 148 FKGIELIASE------NFVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY 221 (586)
T ss_pred hcCeeecccc------ccCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec
Confidence 4556664332 1456788888877766532222 3344455688877778777777633211 344444
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---------hhcCceeE--eeeccCCCCccCCHHHHHh-hhccCc
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---------RHTRLEIR--HFDLLPEKGWEVDLDGLEA-LADENT 183 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---------~~~g~~~~--~~~~~~~~~~~~d~e~l~~-~~~~~~ 183 (421)
+|+.|+..++.+|++|||+|+..+..|.++.... ...|..+. +++++++ ...+|.+++++ +...++
T Consensus 222 -SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rP 299 (586)
T PLN02271 222 -SCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRP 299 (586)
T ss_pred -cHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCC
Confidence 6778888899999999999999888777654322 33454444 4445433 34699999998 567788
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++|++....|| .. -+++++.++|+++|+++++|.+|......+... .++.. ..++.+|.+|++ .|.|
T Consensus 300 KLII~g~Sayp--r~---~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-----aDvvt~TTHKtL--rGPr 367 (586)
T PLN02271 300 KILICGGSSYP--RE---WDYARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-----CDIVTSTTHKSL--RGPR 367 (586)
T ss_pred eEEEECchhcc--Cc---CCHHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-----CcEEEeCCcccC--CCCC
Confidence 98877666777 33 347788899999999999999997755433322 22222 127888999995 5666
Q ss_pred EEEEEeeCCCc------------chhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 263 LGWLVTSDPSG------------ILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 263 ~G~~~~~~~~~------------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
.|.+++++... ....+++.+++...... -+++.....++++.++.......+.+..++..++...|
T Consensus 368 GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaL 447 (586)
T PLN02271 368 GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQAL 447 (586)
T ss_pred ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHH
Confidence 78888854200 00012455666555432 23444444555556666444455688889999999999
Q ss_pred HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------
Q 014631 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------ 397 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------ 397 (421)
.+.|.+. |+.++.....+..+++++..... +...++..|++.||.+.--..++ .++.+||...
T Consensus 448 A~~L~~~-G~~vv~ggTdnHlvLvDl~~~g~-----~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG 521 (586)
T PLN02271 448 ASALLRR-KCRLVTGGTDNHLLLWDLTTLGL-----TGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRG 521 (586)
T ss_pred HHHHHHC-CCeEeeCCCCcceeeecCcccCC-----CHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcC
Confidence 9999887 88866556667778888764321 34566778899999885433222 2578999875
Q ss_pred CCHHHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~ 415 (421)
..++|++++.+.|.++++
T Consensus 522 ~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 522 CLESDFETIADFLLRAAQ 539 (586)
T ss_pred CCcHHHHHHHHHHHHHHh
Confidence 356899999988888876
No 327
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.83 E-value=6.4e-17 Score=155.83 Aligned_cols=357 Identities=17% Similarity=0.106 Sum_probs=210.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~ 119 (421)
..|.+++||..|.-.... ...+|.+.+++++++.+....... ....+.+..+|+.+....+..... ..++++++|+
T Consensus 55 ~dG~~ylD~~~g~~~~~l-GH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGs 131 (459)
T PRK06931 55 VEGNQYLDCLAGAGTLAL-GHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGA 131 (459)
T ss_pred CCCCEEEEcccchhhccC-CCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCcH
Confidence 348899999888644333 357889999999998753211111 112355556666665433211111 2346668999
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCC--Ccc----CCHHHH---
Q 014631 120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEK--GWE----VDLDGL--- 175 (421)
Q Consensus 120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~d~e~l--- 175 (421)
+|+..+++... ...++|+....+|+++...+...+. .+..+|.+... .++ -+.+.+
T Consensus 132 EAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (459)
T PRK06931 132 DAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYY 211 (459)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHHH
Confidence 99999988653 2236899999999998655553211 11222221100 000 012222
Q ss_pred -Hhhhc-----cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEE
Q 014631 176 -EALAD-----ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVI 247 (421)
Q Consensus 176 -~~~~~-----~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 247 (421)
++.+. .+..+.++..| +...|.. .|++.++++.++|++||+++|.||+++++.+.|.. .....++...+++
T Consensus 212 ~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~-~a~~~~gv~PDiv 290 (459)
T PRK06931 212 FENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKM-FAFEHAGIEPDII 290 (459)
T ss_pred HHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchH-HHhhhcCCCCCEE
Confidence 22322 12245566677 5555665 57788999999999999999999999998777753 2333343333344
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTA 325 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~ 325 (421)
+++|.+ ..|+++|.+++++ + ++.+... ...+.+.|+++++++.+.|+...+ ...++..+.-...+
T Consensus 291 ---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~l~~~~~~~G~~l~ 357 (459)
T PRK06931 291 ---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEENLAQNAAERGEWLK 357 (459)
T ss_pred ---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 568996 4679999888742 2 2433222 223557899999999888875333 22333333333333
Q ss_pred HHHHHHhhcCCCccccCCCCceeEEEEecCccc-cc----CCC-C---hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631 326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-LE----GIS-D---DMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396 (421)
Q Consensus 326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~ 396 (421)
+.+.+..++.|.+..+ . .-|.+..+++.... .. ... + ...+.. .+.++||.+.++.. ..+.+|+.+
T Consensus 358 ~~L~~l~~~~~~i~~v-r-G~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~Gvl~~~~~~--~~~~l~~~P 432 (459)
T PRK06931 358 AQLAELQKRYPCIGNV-R-GRGLMIGIEIVDERQPADAMGSYPADGELAAAIQK-ACFENGLLLERGGR--NGNVVRLLP 432 (459)
T ss_pred HHHHHHHHhCCCeEeE-e-cCceEEEEEEccCcccccccccCCccHHHHHHHHH-HHHHCCcEEeecCC--CCCEEEEEC
Confidence 3444333345433322 2 23566667774321 00 000 0 123333 45678999977432 146799888
Q ss_pred c--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 397 A--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+ .+++++++++++|.+++++..+
T Consensus 433 pl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 433 PLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred CCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 7 7999999999999999987654
No 328
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.1e-17 Score=149.26 Aligned_cols=348 Identities=16% Similarity=0.181 Sum_probs=222.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..+.++||+..+.....++ +..|++.+++.+++.+- ....|...+ .-++.+.+.+.+.+ -..++|+|+++|
T Consensus 53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~-----~~~~rvff~nsG 125 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK-----GSAERVFFCNSG 125 (433)
T ss_pred CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC-----CCccEEEEecCC
Confidence 3588999999886443343 56899999999998863 233333332 24566666666543 378999999999
Q ss_pred HHHHHHHHHHhcC------CCC--eEEEcCCCCcchHHHHhh-cCceeEeeeccC---CC---CccCCHHHHHhhhccCc
Q 014631 119 KQAIQVILTVLAR------PGA--NILLPKPGFPLYEANARH-TRLEIRHFDLLP---EK---GWEVDLDGLEALADENT 183 (421)
Q Consensus 119 ~~al~~~~~~l~~------~gd--~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~---~~---~~~~d~e~l~~~~~~~~ 183 (421)
|+|+..+++.-.+ +-+ +|+....+|++-...+.. .+......|.+| +- .+ =|+.++++.+..+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~y-nd~t~l~k~~~~h~ 204 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEY-NDSTALEKLFESHK 204 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeeccc-CCHHHHHHHHHhCC
Confidence 9999999977532 112 488899999875433332 233223332211 10 01 16888888886544
Q ss_pred --eEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 184 --VAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 184 --~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
.+.+|..| +...|.. ..++.+..|.+.|+++|+++|.||+++++.+.|... ....+....+ +.++.|.+ ..
T Consensus 205 ~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~-a~e~~~~~PD---I~t~aK~L-~g 279 (433)
T KOG1401|consen 205 GEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGW-AQEYFGVTPD---ITTVAKPL-GG 279 (433)
T ss_pred CceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHH-HHHHhCcCCc---ceeehhhc-cC
Confidence 34456666 6667765 577889999999999999999999999988776532 2222222222 44778995 57
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcc----cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN----ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|...+++ ++++.+..... .+++.+++++.++...|.... .++..+..+.-+..++.+.+.+.+
T Consensus 280 GlPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~ 351 (433)
T KOG1401|consen 280 GLPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKK 351 (433)
T ss_pred CceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999963 57777755432 356889999999999987643 566777777888888888888887
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe------cCCHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF------AIEPSALEEGLG 408 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~------~~~~e~l~~~~~ 408 (421)
-+.-.+- .-..+++..+.+..+. ..+.. ..++.+.++.++........+|+-+ .+++|.++++++
T Consensus 352 ~~~~i~g-~~grgl~ig~~~~~p~-------~~~~d-~~~~~~ll~~~~~~~~~~~gv~i~P~~~l~~~~~~E~i~~~l~ 422 (433)
T KOG1401|consen 352 TPNSICG-GVGRGLVIGFEFEGPV-------YKFAD-AAREQGLLILTLGKGLLEEGVRIAPIYLLTVEHTPEVIQRLLT 422 (433)
T ss_pred CCCceee-eeeeEEEEEEEEeech-------hhhhh-hhhhhhHHHHHHhcccccceEEEeccccccccCcHHHHHHHHH
Confidence 5433211 1333555555554321 11111 1222233332222111123344433 256899999999
Q ss_pred HHHHHHHHhh
Q 014631 409 RIKAFCQRHA 418 (421)
Q Consensus 409 ~l~~~~~~~~ 418 (421)
.+.+.++++.
T Consensus 423 i~~~~l~~~~ 432 (433)
T KOG1401|consen 423 ILEKVLSALN 432 (433)
T ss_pred HHHHHHHHhc
Confidence 9999998865
No 329
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.82 E-value=5.9e-17 Score=149.22 Aligned_cols=222 Identities=18% Similarity=0.165 Sum_probs=160.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~ 161 (421)
+....|++.++++- ..+..+.+++|+.|+..++..++++||+|++++..|.+....+ +..|.++.++.
T Consensus 63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 34578888888875 3567899999999999999999999999999999998865444 45677777664
Q ss_pred ccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 162 LLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
. -+.+++++.+. +++++|++-.|+||+-.+ .++.+|+++|+++|+++|+|+.+....+ +.++ .+
T Consensus 135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v---~DI~~i~~~A~~~g~~vvVDNTfatP~~----q~PL-~~ 199 (396)
T COG0626 135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEV---PDIPAIARLAKAYGALVVVDNTFATPVL----QRPL-EL 199 (396)
T ss_pred C-------CChHHHHHHhcccCceEEEEeCCCCccccc---ccHHHHHHHHHhcCCEEEEECCcccccc----cChh-hc
Confidence 2 25556666666 599999999999999888 7799999999999999999999987432 1222 23
Q ss_pred CCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
+.+ |++.|.+|.++.-+-= .|.+++++ +++.+.+.... ......++.....+..-|+. +.-+
T Consensus 200 GaD---IVvhSaTKyl~GHsDvl~G~v~~~~-------~~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlkT-----L~~R 264 (396)
T COG0626 200 GAD---IVVHSATKYLGGHSDVLGGVVLTPN-------EELYELLFFAQRANTGAVLSPFDAWLLLRGLRT-----LALR 264 (396)
T ss_pred CCC---EEEEeccccccCCcceeeeEEecCh-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHhccch-----HHHH
Confidence 333 8899999997654433 45444442 34555542222 23335566666555444443 5566
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
.++..++...+.+.|++.|.+.-+++|.
T Consensus 265 m~~~~~nA~~IA~~L~~~p~V~~V~yPg 292 (396)
T COG0626 265 MERHNENALKIAEFLADHPKVKKVYYPG 292 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCC
Confidence 7778888999999999988876555663
No 330
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=3.1e-17 Score=153.64 Aligned_cols=219 Identities=12% Similarity=0.082 Sum_probs=149.4
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH----HHHhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE----ANARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~ 161 (421)
+...+|++.++++.+ .+..+.+++|+.|+.+++.+++++||+|+++.+.|.+.. ..+...|++++.++
T Consensus 64 P~~~~lE~~la~leg--------~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLEN--------AEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 346789999999873 346788888889999999999999999999988776654 55567899999887
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
.++.+.+.++ .+++++|++..|+|||+.+ .++++|.++|++++ +++|.+++.. +.+ .++. .+
T Consensus 136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v---~Di~~I~~la~~~~--lvVD~t~~s~-~~~---~pl~-~g 197 (384)
T PRK06434 136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKV---PDIKNVSSFCHEND--VIVDATFASP-YNQ---NPLD-LG 197 (384)
T ss_pred CCChhheeec--------CCCeeEEEEEcCCCCCcee---ecHHHHHHHHHHcC--eEEECCCCCc-ccC---Cchh-cC
Confidence 6532232222 1368899999999999988 67999999999998 4669997432 111 1222 22
Q ss_pred CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
. .+++.|.+|.++.+| .-.|.+++++ +++.+++.... ......++...+.+..-| ..++.+.+
T Consensus 198 a---Divv~S~tK~i~G~~d~~gG~vv~~~-------~~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-----~tL~~R~~ 262 (384)
T PRK06434 198 A---DVVIHSATKYISGHSDVVMGVAGTNN-------KSIFNNLVERRKTLGSNPDPIQAYLALRGL-----KTLGLRME 262 (384)
T ss_pred C---CEEEeecccccCCCCCceEEEEecCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhCC-----CcHHHHHH
Confidence 2 288889999986644 3356665543 23545544332 222233444333333333 33677788
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
+.+++...+.+.|+++|.+.-+.+|.
T Consensus 263 r~~~~a~~~a~~L~~~p~v~~V~yPg 288 (384)
T PRK06434 263 KHNKNGMELARFLRDSKKISNVYYPD 288 (384)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCC
Confidence 88899999999999998875454554
No 331
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.82 E-value=5.6e-17 Score=155.63 Aligned_cols=347 Identities=15% Similarity=0.142 Sum_probs=197.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHH--HHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAAD--AVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~--a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|.+++|+..|.-.... ...+|.+.+ ++.+++.+-.. ..+.. .-..+....+++.+.+..+ +...+.++++++|
T Consensus 43 dG~~ylD~~~g~~~~~l-Gh~~p~v~~~~ai~~ql~~l~~-~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SG 119 (443)
T PRK08297 43 TGRRYLDMFTFFASSAL-GMNHPALADDPEFRAELGRAAL-NKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGG 119 (443)
T ss_pred CCCEeeecccCHhhhcC-CCCChHHhhHHHHHHHHHHhhh-hccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCch
Confidence 47888998777543322 256788888 99988865210 00000 0011222333433332221 1224689999999
Q ss_pred HHHHHHHHHHhcC--------CC------CeEEEcCCCCcchHHHHhhcCc-eeE---e--------eeccCC----CCc
Q 014631 119 KQAIQVILTVLAR--------PG------ANILLPKPGFPLYEANARHTRL-EIR---H--------FDLLPE----KGW 168 (421)
Q Consensus 119 ~~al~~~~~~l~~--------~g------d~Vl~~~p~y~~~~~~~~~~g~-~~~---~--------~~~~~~----~~~ 168 (421)
++|+..+++...+ .| .+|+....+|++....+...+. ... . ++.... ...
T Consensus 120 sEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (443)
T PRK08297 120 ALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGE 199 (443)
T ss_pred HHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCccc
Confidence 9999999987621 12 5799999999988655543321 100 0 100000 000
Q ss_pred c---C------CHHHHHhhhc--cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 169 E---V------DLDGLEALAD--ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 169 ~---~------d~e~l~~~~~--~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
. . +++++++.+. ++..+.++..| +...|.+ .|++.+++|.++|++||+++|.||+++++.+.|..+
T Consensus 200 ~~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~- 278 (443)
T PRK08297 200 DLEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW- 278 (443)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-
Confidence 0 0 2344455553 23344556666 5555654 778899999999999999999999999987776532
Q ss_pred cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH-HHh--hhcccccCCchHHHHHHHHHhhccch-
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD-SIK--GYLNISSGPATFVQGAVPQIFKNTKE- 311 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~- 311 (421)
....++....++ +++|.++ +|.+++.+. + .++.. .+. .....+.+.++++..++.++|+...+
T Consensus 279 a~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 345 (443)
T PRK08297 279 AYQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--V---DEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEED 345 (443)
T ss_pred HHHhcCCCCCEE---Eeccccc-----ccceecchH--H---HHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhc
Confidence 222233222333 5789853 233333210 0 01111 111 11223456788888888888875322
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCC
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCIT-CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN 390 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~ 390 (421)
..+++..+.-+..++.+.+...+.|.+. .+ .+. |.++.++++... ....+...+ .++||++.|+. ..
T Consensus 346 ~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v-rg~-G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~~----~~ 413 (443)
T PRK08297 346 GLVENAARQGEYLLARLEELAAEFPAVVSNV-RGR-GLMCAFDLPTTA-----DRDEVIRRL-WEEGVLVLPCG----ER 413 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCcceee-ecc-ceEEEEEecCHH-----HHHHHHHHH-HHCCEEEecCC----CC
Confidence 2333333333333344444333444332 13 333 667777775321 133555555 57899998753 25
Q ss_pred eEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 391 WLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+|++++ .+++++++++++|.++++++
T Consensus 414 ~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 414 SIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred eEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 6899766 89999999999999998764
No 332
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.82 E-value=6.5e-18 Score=158.41 Aligned_cols=313 Identities=14% Similarity=0.074 Sum_probs=197.0
Q ss_pred CCcHHHHHHHHHHHhcCC-CCCCCC--CCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEc-CCHHHHHHHHHHHhcCCCCe
Q 014631 61 RTTPVAADAVVDAVRSAE-FDCYSP--SVGILPARRAIADYLNSELPCKLS-PDDVYLT-AGCKQAIQVILTVLARPGAN 135 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~-~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~-~g~~~al~~~~~~l~~~gd~ 135 (421)
..++++.+++.+...... .+.+.+ ..-+.+.|+.++++++ +. +.+|+++ +|+|.+++.++..+..+ +.
T Consensus 13 ~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~------~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~ 85 (361)
T TIGR01366 13 KVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFS------LPDGYEVILGNGGATAFWDAATFGLIEK-KS 85 (361)
T ss_pred CCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhC------CCCCceEEEECCchhHHHHHHHHhcccc-cc
Confidence 567889888775311100 112221 1235677888888873 33 4478875 66999999999988643 33
Q ss_pred EEEcCCCCcc-hHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631 136 ILLPKPGFPL-YEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212 (421)
Q Consensus 136 Vl~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~ 212 (421)
+++....|.. +...+... +.++..++.++ +..++ ..+.++++.|.+++..|.||+..|. ++| ++
T Consensus 86 l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~-----~~~~~~~~lV~~~h~et~tG~~~pi---~~I---~~ 152 (361)
T TIGR01366 86 LHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPE-----PQADPGVDVIAWAHNETSTGVAVPV---RRP---EG 152 (361)
T ss_pred cEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCC-----CccCCCCCEEEEcccCCccceeccc---ccc---cc
Confidence 3444445532 23444431 23566666532 21222 2345689999999999999999774 444 47
Q ss_pred hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh------
Q 014631 213 KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG------ 286 (421)
Q Consensus 213 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~------ 286 (421)
++|+++++|.+++. |....++... .++++|.+|.++.+|- ++.+++++ ++.+++..
T Consensus 153 ~~g~~~iVDavqs~----g~~~idv~~~-----D~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~~ 214 (361)
T TIGR01366 153 SDDALVVIDATSGA----GGLPVDIAET-----DVYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASGR 214 (361)
T ss_pred cCCCeEEEEcCccc----cCCCCCHHHC-----CEEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCCC
Confidence 89999999999988 4444444432 2678899999988742 56555542 22222221
Q ss_pred --------------h--cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC---c
Q 014631 287 --------------Y--LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE---G 346 (421)
Q Consensus 287 --------------~--~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~---~ 346 (421)
. ....++++.....++.++++..... .++.+.++.+++.+++++.+.+++++..+.... .
T Consensus 215 ~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s 294 (361)
T TIGR01366 215 WVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRS 294 (361)
T ss_pred CCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcc
Confidence 0 0112355555555667777654434 478888999999999999999986555221111 1
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.....+.++.. .+..++...| +++||.+.++......+.+|+|+. ++.+++++++++|+++++++
T Consensus 295 ~~v~~v~~~~g-----~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 295 QVVGTIDFVDD-----IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred cceEEEECCCc-----cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 11122334321 2466666665 677999987653323568999997 89999999999999987763
No 333
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.81 E-value=5.4e-17 Score=154.46 Aligned_cols=279 Identities=18% Similarity=0.189 Sum_probs=199.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----C---
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----P--- 132 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~--- 132 (421)
.+++...+++...+.+. .......++..++++.+..++.+.++.+ ....-.+|+|||+++.+.+.+..+ .
T Consensus 73 ~~~~~a~~~~~~~~~~n-l~d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKN-LGDPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhc-CCCcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 45677777787777763 2223333466899999999999988855 444568899999999977765421 1
Q ss_pred C------CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE--EEEeCCCCCcccccCHHHH
Q 014631 133 G------ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA--MVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 133 g------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~--i~~~~p~nptG~~~~~~~l 204 (421)
+ .+|+++.-.|.++..++..+|.+...++..++ +..+|++++++++++++.. |+-+.++.+||.+ +++
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~i---Ddi 226 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSI---DDI 226 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCcc---CCH
Confidence 1 26999999999999999999999999998876 6789999999999887776 8888889999999 999
Q ss_pred HHHHHHHHhcCcEEEEcccccccccC-CCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFG-STPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++|.++|+++++++++|.+++++..- ...... ...++.- .-+..++||. +.....+||++.++++ .+.+
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~v--dSIt~d~HK~-g~aP~~~G~il~rd~e------~l~~ 297 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGV--DSITVDGHKY-GLAPIGCGVVLFRDEE------ALRR 297 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCc--eEEEECcccc-cCCCCCceEEEEECHH------Hhhh
Confidence 99999999999999999999987631 111111 1111111 1334589999 6777889999998753 2333
Q ss_pred HHhhhcc-----------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631 283 SIKGYLN-----------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351 (421)
Q Consensus 283 ~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 351 (421)
.+..... ..++-+.....++...|.....+++.++.++..++++++.+.|++.+.++++..|. .+.+.
T Consensus 298 ~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~ 376 (460)
T COG0076 298 ILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVA 376 (460)
T ss_pred hhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEE
Confidence 2221111 11122222333344455544568889999999999999999999986688665564 44566
Q ss_pred EecC
Q 014631 352 VKLN 355 (421)
Q Consensus 352 ~~~~ 355 (421)
++.+
T Consensus 377 fr~~ 380 (460)
T COG0076 377 FRLK 380 (460)
T ss_pred EEcC
Confidence 6664
No 334
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=2.9e-17 Score=139.90 Aligned_cols=326 Identities=15% Similarity=0.117 Sum_probs=208.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--------CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--------DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
...+++|+.++ +.++..+|++.++-+++++.... .+| ...+..|+..||++-+ .++.++
T Consensus 66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGt--q~iHk~LE~kiAqfh~--------rED~il 132 (417)
T KOG1359|consen 66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGT--QDIHKLLESKIAQFHG--------REDTIL 132 (417)
T ss_pred ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecc--hHHHHHHHHHHHHHhC--------CCceEE
Confidence 45778888776 66778899999999999886211 122 2235688888888863 567778
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeC
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVN 190 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~ 190 (421)
.+++-.|+..++.+++.|.|.|+.+...|.++....+... ++- .+|+-.++..+ +.+.+ ++.+.
T Consensus 133 ypscfdANag~feail~pedAvfSDeLNhASIIdGirLck---ry~--------h~dv~~l~~~l~~a~k~r~k-lv~TD 200 (417)
T KOG1359|consen 133 YPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK---RYR--------HVDVFDLEHCLISACKMRLK-LVVTD 200 (417)
T ss_pred eccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh---hhc--------cchhHHHHHHHHHhhhheEE-EEEec
Confidence 8888889999999999999999999999988877666543 111 13555555433 22334 34444
Q ss_pred C-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccC-CCCceEEEEE
Q 014631 191 P-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWI-VPGWRLGWLV 267 (421)
Q Consensus 191 p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~-~~G~r~G~~~ 267 (421)
. -..-|-+ ..+++|.+++++||.++++||+|+.+.++..+...-..++. .+..++.++++|.+| ..| ||..
T Consensus 201 g~FSMDGdi---aPl~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G---Gytt 274 (417)
T KOG1359|consen 201 GVFSMDGDI---APLEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG---GYTT 274 (417)
T ss_pred ceeccCCCc---ccHHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC---CCcc
Confidence 4 5678888 45888889999999999999999887776544333223332 233477899999976 344 9999
Q ss_pred eeCCCcchhHHHHHHHHhhhcc--cccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 268 TSDPSGILQELRIVDSIKGYLN--ISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
++. .++.-+++... .+++.-+ ...-.+.+++.. --.-.+...+.+.+.+++++.++.- |+. +..
T Consensus 275 gp~--------~li~llrqr~RpylFSnslppavV~~a~ka~dl--lm~s~~~i~~~~a~~qrfr~~me~a-Gft-Isg- 341 (417)
T KOG1359|consen 275 GPK--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDL--LMVSSKEIQSRQANTQRFREFMEAA-GFT-ISG- 341 (417)
T ss_pred CCh--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHH--HHhhHHHHHHHHHHHHHHHHHHHhc-Cce-ecC-
Confidence 863 35555554432 2222222 112222222221 0112344556666777777777654 777 422
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
..-+...+.+.+.. ....+..++|+ .|++|..-+++-.+ ..+|+.++ +++|+++++++++.++.+.++
T Consensus 342 ~~hPI~pv~lGda~-----lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 342 ASHPICPVMLGDAR-----LASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred CCCCccceecccHH-----HHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhhc
Confidence 21223333343221 24566777765 59999865554332 35888887 899999999999999887654
No 335
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=3.3e-17 Score=151.50 Aligned_cols=340 Identities=17% Similarity=0.159 Sum_probs=201.8
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEE---E
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVY---L 114 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~---~ 114 (421)
.+-|+|--.. -...+.+.+++...+.+....+ |+...-+.++++...+...+.|+. ++++-. =
T Consensus 20 ~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~--~~~~w~anvq 91 (399)
T PF00464_consen 20 RSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGA--EPKEWYANVQ 91 (399)
T ss_dssp HHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT---STTTEEEE--
T ss_pred hcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCC--CcccceEEee
Confidence 4557775443 1355778787776665532222 333334567777777777777763 333322 2
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HH-------hhcCceeEeeeccCCCCccCCHHHHHhhhcc-Cc
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NA-------RHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NT 183 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~-------~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~ 183 (421)
..+|+.|+..++.+|++|||+|+..+..+.++.. .. .....+.+.++++++ ...+|.|++++.+.. ++
T Consensus 92 p~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~~~ID~d~l~~~a~~~kP 170 (399)
T PF00464_consen 92 PHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-TGLIDYDELEKLAKEHKP 170 (399)
T ss_dssp -SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-TSSB-HHHHHHHHHHH--
T ss_pred cCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-CCeECHHHHHHHHhhcCC
Confidence 4677889999999999999999998876654422 11 123356777888754 457999999997754 66
Q ss_pred eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++|++..-.+|- +-+++++.++|++.|.++++|.+|.. +..+|..+.|+.. .+ ++.+|.+|+ ++|.|
T Consensus 171 klIi~G~S~y~~-----~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~--AD---vvt~sThKt--l~GPr 238 (399)
T PF00464_consen 171 KLIICGASSYPR-----PIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY--AD---VVTGSTHKT--LRGPR 238 (399)
T ss_dssp SEEEEE-SSTSS--------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT--SS---EEEEESSGG--G-SSS
T ss_pred CEEEECchhccC-----ccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc--ce---EEEeecccc--ccccC
Confidence 766554333322 24588999999999999999999954 4455554455543 22 778899999 47888
Q ss_pred EEEEEeeC------CCcchhHHHHHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 263 LGWLVTSD------PSGILQELRIVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 263 ~G~~~~~~------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
.|.++++. +.....++++.+++....... +++.....++.+.++.......+++..++.-++.+.|.+.|.+
T Consensus 239 ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~~L~~ 318 (399)
T PF00464_consen 239 GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAEALQE 318 (399)
T ss_dssp -EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999861 110000256888888775432 3344444444444555433456788899999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSAL 403 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~l 403 (421)
. |+.++.....+..+|+++..... +...+...|++.||.+..-..++ ....+|++.. ..++++
T Consensus 319 ~-G~~v~~ggTd~H~vlvd~~~~~~-----~g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGlRlGT~~lT~rG~~e~dm 392 (399)
T PF00464_consen 319 R-GFKVVTGGTDNHQVLVDLRSFGI-----DGKEAEKALEEAGIIVNKNTIPGDRSPFVPSGLRLGTPALTRRGMKEEDM 392 (399)
T ss_dssp T-T-EEGGGS-SSSEEEEEGGGGTS------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEEEEESHHHHHTT--HHHH
T ss_pred C-CcEEEECCCCCCeEEEEeccccc-----chHHHHHHHHhcCeeecccccCCCCCCCCCCEEEECCHHHHhCCCCHHHH
Confidence 7 88866555667788888865321 34456677899999996432222 2468999975 346777
Q ss_pred HHHHHHH
Q 014631 404 EEGLGRI 410 (421)
Q Consensus 404 ~~~~~~l 410 (421)
+++.+.|
T Consensus 393 ~~iA~~I 399 (399)
T PF00464_consen 393 KEIAELI 399 (399)
T ss_dssp HHHHHHH
T ss_pred HHHHhhC
Confidence 7766543
No 336
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=2.8e-18 Score=154.33 Aligned_cols=319 Identities=13% Similarity=0.118 Sum_probs=212.8
Q ss_pred CCCcHHHHHHHHHHHhc-C-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRS-A-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~-~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
.+..+.+.+++...-.. . .-..-+...-+.++++.+|+|++ .++.++|..| -..+...+.+|+.||.-|+
T Consensus 154 g~ca~~~~~~~~kygl~~css~~e~G~~~~hkelE~l~A~f~g-------~e~a~vF~mG-f~TNs~~~p~l~~~gsLIi 225 (519)
T KOG1357|consen 154 GPCAEASLKSFDKYGLSRCSSRHEAGTTEEHKELEELVARFLG-------VEDAIVFSMG-FATNSMNIPSLLGKGSLII 225 (519)
T ss_pred CcCChHHHHHHHHhcccccccchhcccHHHHHHHHHHHHHhcC-------CcceEEEecc-ccccccCcceeecCCccee
Confidence 46677777777665322 1 11122223345788888888884 3777888777 4445555778889999999
Q ss_pred EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------C-----ceEEEEeCC-CCCcccccCHHHH
Q 014631 138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-------N-----TVAMVIVNP-GNPCGNVFTYQQL 204 (421)
Q Consensus 138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-------~-----~~~i~~~~p-~nptG~~~~~~~l 204 (421)
..+..|.+....++..|+.++.+.++ |.+.||+.+++ + .+++++... ...-|.+ ..+
T Consensus 226 SDelNHaSi~~GaRLSgAtiRVfkHN-------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~i---v~L 295 (519)
T KOG1357|consen 226 SDELNHASLITGARLSGATTRVFRHN-------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTI---VDL 295 (519)
T ss_pred eccccchheeccccccCceEEEEecC-------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCee---ccc
Confidence 99999999999999999999988865 44555554432 1 134444433 4477777 679
Q ss_pred HHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
.+++.+++++..+++.||+|+....+ |.....+...++.+..|.+++|.|+|+..| ||+.++ +++.+
T Consensus 296 p~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~G---Gyiags--------k~lid 364 (519)
T KOG1357|consen 296 PEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGS--------KELID 364 (519)
T ss_pred HHHHHhhccccEEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhccccc---ceecCc--------HHHHh
Confidence 99999999999999999999887654 333334445566666788999999999998 999986 35777
Q ss_pred HHhhhcc----cccCCchHHHHHHHHH--hh-ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecC
Q 014631 283 SIKGYLN----ISSGPATFVQGAVPQI--FK-NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLN 355 (421)
Q Consensus 283 ~~~~~~~----~~~~~~~~~~~~~~~~--l~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~ 355 (421)
.+..... .+..+++++|...... +. .......++..+++.++..+++..|.+. |+. +....++..+.+.+-
T Consensus 365 ~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfi-vyG~~dSpVvplll~ 442 (519)
T KOG1357|consen 365 YLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKM-GFI-VYGNNDSPVVPLLLY 442 (519)
T ss_pred hhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEE-EecCCCCCcceeeec
Confidence 6665542 2234555555554332 21 1124566778889999999999999987 776 445555533332222
Q ss_pred cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
.+ ..-..+-.++++ +++.++-..+... ...+|+|.+ ++.|+++++++.+.+.=+
T Consensus 443 ~~-----~k~~~f~r~~l~-~nigvVvvgfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 443 GP-----AKIVAFSREMLE-RNIGVVVVGFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred Cc-----ccccHHHHHHHh-cCceEEEEeCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 11 123344445544 4666554443332 456788886 899999999999887643
No 337
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.80 E-value=3.8e-16 Score=145.99 Aligned_cols=310 Identities=16% Similarity=0.139 Sum_probs=200.6
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhhcCceeEe
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY-EANARHTRLEIRH 159 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~ 159 (421)
.|+.+..+.+|++.++++++ .+.++.+++|+.|+++++...++|||.| +...|... .......|+.++.
T Consensus 73 ~Yagd~s~~~LE~~vAe~lG--------~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~fvD 142 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYYG--------FKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGIFVD 142 (460)
T ss_pred hhcCCCcHHHHHHHHHHHHC--------CCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcEEEe
Confidence 58878888999999999984 3569999999999999876678999965 44444433 3436777775444
Q ss_pred eecc--------CCCCccCCHHHHHhhhccC----ceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 160 FDLL--------PEKGWEVDLDGLEALADEN----TVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 160 ~~~~--------~~~~~~~d~e~l~~~~~~~----~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
+..+ ....+.+|++++++.++++ +..+.+..++|.. |...|.++++++.++|++||+.+|.|.++..
T Consensus 143 i~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~ 222 (460)
T PRK13237 143 IIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCV 222 (460)
T ss_pred eecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchh
Confidence 4211 1234679999999988653 2346677788877 7999999999999999999999999999875
Q ss_pred cc----------cCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc----
Q 014631 227 LT----------FGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---- 291 (421)
Q Consensus 227 ~~----------~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 291 (421)
.. +.+..... +..+.... .....|++|.++.+- .|++++++ +++.++++.....+
T Consensus 223 gna~fI~~re~~y~~~~i~ei~~e~~s~a-D~~t~S~~K~~~~~~--GG~i~t~D-------~eL~~~~r~~~~~~eG~~ 292 (460)
T PRK13237 223 ENAYFIKEREEGYQDKSIKEIVHEMFSYA-DGCTMSGKKDCLVNI--GGFLAMND-------EELFDEAKELVVVYEGMP 292 (460)
T ss_pred cChhhhcccccccCCCcHhHHhhhccCcC-cEEEEeCCCCCCCCC--ceEEEECC-------HHHHHHHHHhccccCCCc
Confidence 31 11211100 01111111 255668999976652 38888765 46778877764221
Q ss_pred --cCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc--ccc-CCCCh
Q 014631 292 --SGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS--LLE-GISDD 365 (421)
Q Consensus 292 --~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~ 365 (421)
++.+.-...+++..|.+.. ..++..+. ...+++.+.|.+. |+. +..|.+|.-++++.... .++ .....
T Consensus 293 tygg~~grd~~alAvgl~E~~~~~y~~~ri----~~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~~~~p~ 366 (460)
T PRK13237 293 SYGGMAGRDMEAMAIGIEESVQYEYIEHRV----GQVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQDQFPA 366 (460)
T ss_pred CCCChhhhHHHHHHhHHHhhchHHHHHHHH----HHHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCcccChH
Confidence 1221212333333343222 33333333 4556777777766 888 44788888887754321 001 11136
Q ss_pred HHHHHHHHhhcCeeEE-eCCCC-CC-----------CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631 366 MEFALQLAKEESVIVL-PGMAV-GM-----------KNWLRITFA---IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 366 ~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~iRi~~~---~~~e~l~~~~~~l~~~~~~ 416 (421)
..++.+|..+.||--. -|+.. +. -.-+|+++. .|.+.++.+.++|..+.++
T Consensus 367 ~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 367 QALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 6788888888888543 23221 11 156999998 6889999999999888755
No 338
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.80 E-value=1.7e-16 Score=152.20 Aligned_cols=344 Identities=15% Similarity=0.151 Sum_probs=194.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHH--HHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAA--DAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|..++||..|......+ ..+|.+. +++.+++.+........ ....+.+.+ +++.+.+..+ +...+.++++++|
T Consensus 36 dG~~ylD~~~g~~~~~lG-h~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~-l~~~l~~~~~-~~~~~~v~f~~sG 112 (431)
T TIGR03251 36 DGRRYLDMFSFFASMALG-MNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMAR-FVDTFARVLG-DPALPHLFFIEGG 112 (431)
T ss_pred CCCChhhcccChhhcCCC-CCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHH-HHHHHHHhcC-CCCcCEEEEeCCc
Confidence 478888887775443333 5678888 89988887632101111 111233333 3333322111 1134689999999
Q ss_pred HHHHHHHHHHhcC--------C------CCeEEEcCCCCcchHHHHhhc-Cce-eE--eeec-------cC-------CC
Q 014631 119 KQAIQVILTVLAR--------P------GANILLPKPGFPLYEANARHT-RLE-IR--HFDL-------LP-------EK 166 (421)
Q Consensus 119 ~~al~~~~~~l~~--------~------gd~Vl~~~p~y~~~~~~~~~~-g~~-~~--~~~~-------~~-------~~ 166 (421)
++|+..+++.... . +.+|+....+|++....+... |.. .. ..|. .+ ..
T Consensus 113 sEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 192 (431)
T TIGR03251 113 ALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAP 192 (431)
T ss_pred HHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCcccc
Confidence 9999999886531 1 367999999999876554432 211 00 0110 00 00
Q ss_pred Ccc-------CCHHHHHhhhc--cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc
Q 014631 167 GWE-------VDLDGLEALAD--ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV 235 (421)
Q Consensus 167 ~~~-------~d~e~l~~~~~--~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 235 (421)
... -+++++++.+. ++..+.++..| +...|.. .+++.+++|.++|++||+++|+||+++++.+.|..+
T Consensus 193 ~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~- 271 (431)
T TIGR03251 193 NLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW- 271 (431)
T ss_pred ccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-
Confidence 000 12344444543 22334445555 6667765 677889999999999999999999999887766432
Q ss_pred cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH-Hh-h-hcccccCCchHHHHHHHHHhhccch-
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS-IK-G-YLNISSGPATFVQGAVPQIFKNTKE- 311 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-~~-~-~~~~~~~~~~~~~~~~~~~l~~~~~- 311 (421)
....++...+++ +++|.+ +. .|++...+ + .++... +. . ....+.+.+++..+++.++|+...+
T Consensus 272 a~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i---~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~ 338 (431)
T TIGR03251 272 AYQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---V---DEVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEE 338 (431)
T ss_pred HHHhcCCCCCEE---EecccC--cc--ceEEecch---H---HHhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 222233222333 478984 22 35554321 0 012211 11 0 1123456788888888888875332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
...++..+.-+..++.+.+..++.+++...... .|.+..++++... ....+...+ .++||.+.|.. ...
T Consensus 339 ~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg-~G~~~~i~~~~~~-----~~~~~~~~l-~~~Gvl~~~~g----~~~ 407 (431)
T TIGR03251 339 RLVDNARVQGAHLLARLHELAAEFPHLVSNPRG-RGLMCAFDLPSTA-----DRDEVIRQL-YREGVLLLGCG----ERS 407 (431)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhCccceecccc-cceeEEEEeCCHH-----HHHHHHHHH-HhCCeEEecCC----CCe
Confidence 223444444444555555444445423211122 3666677775321 123455554 57899997743 256
Q ss_pred EEEEec--CCHHHHHHHHHHHHHH
Q 014631 392 LRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
+|++++ ++++++++++++|.++
T Consensus 408 lr~~P~l~~t~~eid~~l~~l~~~ 431 (431)
T TIGR03251 408 IRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred EEEECCccCCHHHHHHHHHHHHhC
Confidence 898887 7999999999998763
No 339
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.79 E-value=1.8e-16 Score=133.68 Aligned_cols=336 Identities=14% Similarity=0.164 Sum_probs=220.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--------CCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--------SVGILPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--------~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
.+..||++ |-+.. ...+++..+++.+.-+..+.++|.. .+-+..+.+.+++|++ -+.+-+
T Consensus 14 ~r~~iNv~---PiQrG-GiLt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFlg--------~D~~R~ 81 (382)
T COG1103 14 TRGFINVN---PIQRG-GILTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFLG--------MDEVRV 81 (382)
T ss_pred hcCccccC---hhhcc-CcCCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHhC--------Cceeee
Confidence 35666664 32222 3567888888888766544455542 1225667777888873 577899
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----c---CceEEE
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----E---NTVAMV 187 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~---~~~~i~ 187 (421)
|+|+.++=+++..+++++||.|++...+|++..-++...|.++..+|......+.+++|...+.+. + .+.+.+
T Consensus 82 t~GARe~KfavMhal~~~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lal 161 (382)
T COG1103 82 TAGAREAKFAVMHALCKEGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALAL 161 (382)
T ss_pred cccchhhHHHHHHHhccCCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEE
Confidence 999999999999999999999999999999999999999999999996555567888887766553 2 356678
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+++|....|.. .+-++++++|+++|+.++...+|+. |..+.+....+.+ ++++|-+|++ .+.-++|.+.
T Consensus 162 lTh~Dg~YGNl---~Dakkva~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKsm-AAs~PiGvl~ 230 (382)
T COG1103 162 LTHVDGEYGNL---ADAKKVAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKSM-AASAPIGVLA 230 (382)
T ss_pred EeccCCCcCCc---hhhHHHHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccch-hccCCeeEEe
Confidence 99998888888 7899999999999999999999988 5555555555554 8899999994 5666799998
Q ss_pred eeCCCcchhHHHHHHHHhhhc---------ccccCCchHHHHHHHHHhhccchhHHHHHHHH---HHHHHHHHHHHhhcC
Q 014631 268 TSDPSGILQELRIVDSIKGYL---------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDI---LRDTADICYDRIKEI 335 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~ 335 (421)
.+. ++.+..-+.. ...++. ....- +...|.+ -.+..++.++ --++.+++.+.|+++
T Consensus 231 ~~e--------E~ae~V~r~Sg~~~~~KEvellGCT-~rGap-ivTlmAS--fP~V~eRVkrWdeEv~kaR~fv~elEki 298 (382)
T COG1103 231 MSE--------EWAEIVLRRSGRAFPKKEVELLGCT-VRGAP-IVTLMAS--FPHVVERVKRWDEEVEKARWFVAELEKI 298 (382)
T ss_pred ehh--------HHHHHHHhhcccccccceeeeeccc-ccCch-HHHHHhc--CHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 863 3333321111 011111 11100 1111211 1122222221 225667888888888
Q ss_pred CCcccc-CCCCceeEEEEecCccc--ccCCCChHHHHHHHHhhcCee-EEeCCCCCCCCeEEEEe-cCCHHHHHHHHHHH
Q 014631 336 PCITCP-RKPEGSMFVMVKLNLSL--LEGISDDMEFALQLAKEESVI-VLPGMAVGMKNWLRITF-AIEPSALEEGLGRI 410 (421)
Q Consensus 336 ~g~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~~~~~iRi~~-~~~~e~l~~~~~~l 410 (421)
.|+... ..|..--.+.++.|... ........-|+.+-|+++||. +.|| ...++.+|. +.+.|+++..++++
T Consensus 299 gg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G----~Tk~~K~svyGl~~Eqve~V~~af 374 (382)
T COG1103 299 GGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPG----QTKYFKLSVYGLSWEQVEYVVDAF 374 (382)
T ss_pred hhHHHhCCCCcccceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccC----ceeEEEEEeecCCHHHHHHHHHHH
Confidence 556522 13433223333333210 000001112344445777774 3444 357899987 59999999999999
Q ss_pred HHHHHHh
Q 014631 411 KAFCQRH 417 (421)
Q Consensus 411 ~~~~~~~ 417 (421)
+++++++
T Consensus 375 keI~eky 381 (382)
T COG1103 375 KEIAEKY 381 (382)
T ss_pred HHHHHhc
Confidence 9998875
No 340
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.79 E-value=9.5e-17 Score=138.90 Aligned_cols=339 Identities=17% Similarity=0.185 Sum_probs=220.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC---CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD---CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
|..++||-.+-..++ ....+|.+.++++++.++-.++ .|..- +.++.+.+++++ | -+.++-++.|.
T Consensus 58 Gk~ylDflsaysaVn-qGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf----~----~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSAVN-QGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF----G----YDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhhcc-cCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc----C----cceeeecccch
Confidence 778888876654433 2468999999999998863221 23222 346666666654 3 45677788889
Q ss_pred HHHHHHHHHhc------C--CCC--eEEEcCCCCcchHHHHhhcCceeEe----eeccCC----CCccCCHHHHHhhhcc
Q 014631 120 QAIQVILTVLA------R--PGA--NILLPKPGFPLYEANARHTRLEIRH----FDLLPE----KGWEVDLDGLEALADE 181 (421)
Q Consensus 120 ~al~~~~~~l~------~--~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~----~~~~~~----~~~~~d~e~l~~~~~~ 181 (421)
||.+.++.... + |.+ +|+....+|++-.-.+-+++.+... =|.-|. -.++ |.|+++..++.
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~-d~eale~~l~~ 205 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYG-DAEALEVALKS 205 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccC-CHHHHHHHhcC
Confidence 99998887653 1 322 4555566666533222222222100 000010 0111 78999998877
Q ss_pred CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 182 NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 182 ~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
...+.++..| +...|++. |+..+++..++|++||+++|.||++.+..++|.-. ....-.....+++ |.|.++.+
T Consensus 206 ~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~l-a~d~env~PDivi---lgKalSGG 281 (427)
T KOG1402|consen 206 PNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLL-ACDYENVRPDIVI---LGKALSGG 281 (427)
T ss_pred CCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEE-EeehhhcCCCeEE---EeccccCC
Confidence 6666678888 78899875 55779999999999999999999999999887632 2111111223443 46997555
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--- 335 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 335 (421)
=++++.++++ .+++..++.... .+.+.|++..+++.++|+...+ ++..++.+.+-+.++..|.++
T Consensus 282 ~~Pvsavl~~--------~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e---ekL~era~~lG~~l~~~L~~l~~~ 350 (427)
T KOG1402|consen 282 VYPVSAVLAD--------DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE---EKLVERAAKLGEILRDQLNKLQKK 350 (427)
T ss_pred eeeeEEEEec--------HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhcccc
Confidence 5688888875 367766666543 3568899999999998875333 344555666667777777765
Q ss_pred -CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 336 -PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 336 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
|++... ....|++..+.+......+ .+..+++.. +++.|++--|.+ .+.||+.+. .+++|+++.++.|+.
T Consensus 351 ~p~~v~~-VRGrGl~~ai~i~~~~~~~-~~aw~~cl~-lk~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k 423 (427)
T KOG1402|consen 351 FPHVVKE-VRGRGLLNAIVINPSKTSG-QDAWDVCLA-LKENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEK 423 (427)
T ss_pred ccchhhe-eeccceEEEEEeccccccc-hhHHHHHHc-ccccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHH
Confidence 343312 2334677777776433221 245566654 488899888765 468999987 789999999999998
Q ss_pred HHH
Q 014631 413 FCQ 415 (421)
Q Consensus 413 ~~~ 415 (421)
++.
T Consensus 424 ~i~ 426 (427)
T KOG1402|consen 424 TIA 426 (427)
T ss_pred Hhc
Confidence 763
No 341
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.79 E-value=6e-18 Score=141.99 Aligned_cols=166 Identities=16% Similarity=0.112 Sum_probs=129.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH-HHHhhcCceeEeeeccCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE-ANARHTRLEIRHFDLLPEK 166 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~~~~~~~~ 166 (421)
+.++++.++++++ .+.+++++++|+++++.+++.++.+++++|+++.+.|++.. ..+...|.++..++.+...
T Consensus 2 ~~~~~~~l~~~~~------~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 75 (170)
T cd01494 2 LEELEEKLARLLQ------PGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAG 75 (170)
T ss_pred HHHHHHHHHHHcC------CCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCC
Confidence 3678899999873 45788999999999999999999888999999999999988 8888899999998876543
Q ss_pred CccCCHHHHHhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631 167 GWEVDLDGLEALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245 (421)
Q Consensus 167 ~~~~d~e~l~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 245 (421)
....+.+.+++.. .++++.+++++++|++|...+. ++|.++|+++|+++|+|++|..+...... .. ....+.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~---~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~~ 148 (170)
T cd01494 76 YGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPL---KEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGGA 148 (170)
T ss_pred ccchhhhhhhhccccCceEEEEEecCcCCCCeEcCH---HHHHHHHHHcCCEEEEecccccccccccc-cc---cccccC
Confidence 3323333554433 4678888999999999998764 88888999999999999999987654322 11 111223
Q ss_pred EEEEcccccccCCCCceEEEEEe
Q 014631 246 VITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
.+++.|++|.|+. .++|++++
T Consensus 149 d~~~~s~~K~~~~--~~~G~l~~ 169 (170)
T cd01494 149 DVVTFSLHKNLGG--EGGGVVIV 169 (170)
T ss_pred CEEEEEcccccCC--CceEEEEe
Confidence 4778899999765 66999886
No 342
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.79 E-value=8.9e-17 Score=153.60 Aligned_cols=343 Identities=14% Similarity=0.079 Sum_probs=195.6
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHH-HhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDA-VRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~-~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
..|..++|+..|...... ...+|.+.+++.++ ..... ...|.. ....++.+.+++.+....+ ...+.++++++
T Consensus 55 ~dG~~ylD~~sg~~~~~l-Gh~~p~i~~Ai~~q~~~~~l~~~~~~~~-~~~~~la~~l~~~l~~~~p--~~~~~v~f~~S 130 (464)
T TIGR00699 55 VDGNRLLDLYSQISSIPI-GYNNPALLKAAQSPEMATTLINRPALGN-FPSKDWAKILKEGILKVAP--KGQDQVWTGMS 130 (464)
T ss_pred CCCCEEEEccCCHhhhcC-CCCCHHHHHHHHHHHHHHhhcccccCCc-HHHHHHHHHHHHhHHhhCC--CCcCEEEEeCC
Confidence 348899999888655333 35789999999984 23211 111211 1112344444432222221 22368999999
Q ss_pred HHHHHHHHHHHhcC--------------------------CC---CeEEEcCCCCcchHHHHhhcCc-e-----------
Q 014631 118 CKQAIQVILTVLAR--------------------------PG---ANILLPKPGFPLYEANARHTRL-E----------- 156 (421)
Q Consensus 118 ~~~al~~~~~~l~~--------------------------~g---d~Vl~~~p~y~~~~~~~~~~g~-~----------- 156 (421)
|++|+..+++.... +| .+|+....+|++....+..... .
T Consensus 131 GsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~ 210 (464)
T TIGR00699 131 GSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFD 210 (464)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCC
Confidence 99999999986521 11 2799999999987655443221 1
Q ss_pred eEeeeccCC-CCc-----------cCCHHHHHhhhcc--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEE
Q 014631 157 IRHFDLLPE-KGW-----------EVDLDGLEALADE--NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 157 ~~~~~~~~~-~~~-----------~~d~e~l~~~~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~ 220 (421)
...+|.+.. ..+ .-+++.+++.+.. +..+.++..| +...|... +++.++++.++|++||+++|+
T Consensus 211 ~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~ 290 (464)
T TIGR00699 211 WPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIV 290 (464)
T ss_pred ceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEE
Confidence 011111100 000 0135556666642 2234456666 55667765 678899999999999999999
Q ss_pred cccccccccCCCCcccccccCCC--CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-cccccCCchH
Q 014631 221 DEVYDHLTFGSTPYVRMGVFGST--VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-LNISSGPATF 297 (421)
Q Consensus 221 De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 297 (421)
||++.++.+.|..+ ....++.. .++ .+++|.++..| +++.. +........ ...+.+.+++
T Consensus 291 DEV~tGfGrtG~~f-a~e~~gv~~~PDi---~t~gK~lg~gG----~~~~~---------~~~~~~~~~~~~~T~~gnp~ 353 (464)
T TIGR00699 291 DEVQTGVGATGKFW-AHEHWNLDDPPDM---VTFSKKFQTAG----YFFHD---------PAFRPNKPYRQFNTWMGDPS 353 (464)
T ss_pred eeeeeCCCCCcchh-HHHhcCCCCCCCE---EEehhhhccCC----ccccc---------hhccCCCCcccccCCCCCHH
Confidence 99999987766532 22222221 223 36789964444 33332 111111111 2235578888
Q ss_pred HHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh
Q 014631 298 VQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE 375 (421)
Q Consensus 298 ~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 375 (421)
+.+++.+.|+...++ ..++..+.-...++.+.+..+++| .+..+.....|+++.++++... ....+... +.+
T Consensus 354 ~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~~-----~~~~i~~~-~~~ 427 (464)
T TIGR00699 354 RALILREIIQEIKRKDLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDEA-----KRDKLLKK-ARN 427 (464)
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCHH-----HHHHHHHH-HHH
Confidence 888888787653322 223332222333333333333454 2331211134677777775321 13345544 466
Q ss_pred cCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 376 ESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 376 ~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
+||++.+. ..+.+|+.++ .+++++++++++|.+++
T Consensus 428 ~Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 428 NGVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred CCcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 79999763 1378999987 79999999999998864
No 343
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.77 E-value=2.9e-16 Score=150.61 Aligned_cols=336 Identities=15% Similarity=0.137 Sum_probs=187.9
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|..+|||..|.-.... ...+|.+.+++.+++++.. .+.. .....++.+.+++.+ + ..+.++++++|+
T Consensus 45 ~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~--~~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~sGs 114 (431)
T PRK06209 45 VDGNEYIEYGMGLRAVGL-GHAYPPVVEAVREALQDGC--NFTRPSAIELDAAESFLELI----D---GADMVKFCKNGS 114 (431)
T ss_pred CCCCEEEEccccccchhc-CCCCHHHHHHHHHHHHhCc--CCCCCCHHHHHHHHHHHHhC----C---ccceEEEecCHH
Confidence 458899999887544332 3578899999999998743 2322 111113444444443 2 136899999999
Q ss_pred HHHHHHHHHhc-CCC-CeEEEc-CCCCcchHHH---Hhh--cCce--e--EeeeccCCCCccCCHHHHHhhhcc--CceE
Q 014631 120 QAIQVILTVLA-RPG-ANILLP-KPGFPLYEAN---ARH--TRLE--I--RHFDLLPEKGWEVDLDGLEALADE--NTVA 185 (421)
Q Consensus 120 ~al~~~~~~l~-~~g-d~Vl~~-~p~y~~~~~~---~~~--~g~~--~--~~~~~~~~~~~~~d~e~l~~~~~~--~~~~ 185 (421)
+|+..+++... -.| .+|+.. ..+|+++... ... .|.. . ..+.. .+ -|++++++.+.. +..+
T Consensus 115 eA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~-~d~~~l~~~l~~~~~~~a 189 (431)
T PRK06209 115 DATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF----RY-NDIASLEALFEDHPGRIA 189 (431)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc----CC-CCHHHHHHHHHhCCCCEE
Confidence 99999998643 234 345554 3344332111 000 0110 0 00111 01 178888887742 3345
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
.+++.|. .|...+.+.+++|.++|++||+++|+||+++++.+.+..........+ . +.+++|.++ .|+.+|+
T Consensus 190 avi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~~~gv~P--D---i~t~gK~lg-gG~p~~a 261 (431)
T PRK06209 190 CVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQKLYGIVP--D---LSCFGKALG-NGFAVSA 261 (431)
T ss_pred EEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhHHhCCCc--c---eeeehhhhc-CCcccEE
Confidence 5666774 344677889999999999999999999999877543221111112222 2 357899975 5788999
Q ss_pred EEeeCCCcchhHHHHHHH--Hhh---h----cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 266 LVTSDPSGILQELRIVDS--IKG---Y----LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~--~~~---~----~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
++++ +++++. +.. . ...+.+++++..+++.++|+...+ ...++..+.-+..++.+.+...++
T Consensus 262 v~~~--------~~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~L~~~~~~~ 333 (431)
T PRK06209 262 LAGK--------REYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDEDVIERLHEQGAKLAAGVNEAAAEH 333 (431)
T ss_pred EEEH--------HHHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9985 356554 211 1 122345677888888888765332 223333333333333343333334
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCCh--HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDD--MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++.......+.+..+..+........... ..+..+ +.++|+.+.| ++++..+++++|++++++|.++
T Consensus 334 -~~~~~vr~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gi~~p~---------l~is~~ht~~dId~~l~~l~~~ 402 (431)
T PRK06209 334 -GLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQE-TIRRGVLMPS---------LVVSYAHGDADIERTIDAVHGA 402 (431)
T ss_pred -CCCeEEEeecceEEEEEecCCcccCCcHHHHHHHHHH-HHHCCccccc---------ccccccCCHHHHHHHHHHHHHH
Confidence 22201112222222211111000000011 134444 4567997622 4677668999999999999999
Q ss_pred HHHhh
Q 014631 414 CQRHA 418 (421)
Q Consensus 414 ~~~~~ 418 (421)
+++++
T Consensus 403 l~~~~ 407 (431)
T PRK06209 403 LGVYR 407 (431)
T ss_pred HHHHH
Confidence 98864
No 344
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.77 E-value=3.6e-16 Score=142.05 Aligned_cols=214 Identities=19% Similarity=0.117 Sum_probs=152.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~ 163 (421)
...+++.+++..+ ....+++++|+.|+..++..|+.+|++|+..+..|.+....+ ...|.+...+..+
T Consensus 79 ~~~le~~iaal~g--------a~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~ 150 (409)
T KOG0053|consen 79 RDVLESGIAALEG--------AAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVD 150 (409)
T ss_pred hHHHHHHHHHHhC--------CceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechh
Confidence 4688888888762 455888999999999999999999999999999999875554 4566666665432
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
+++.+++++.+++++|++.+|.||+..+ .++++|+++|+++|+++++|+.++... ......++.+
T Consensus 151 -------~~~~~~~~i~~~t~~V~~ESPsNPll~v---~DI~~l~~la~~~g~~vvVDnTf~~p~-----~~~pL~lGAD 215 (409)
T KOG0053|consen 151 -------DLKKILKAIKENTKAVFLESPSNPLLKV---PDIEKLARLAHKYGFLVVVDNTFGSPY-----NQDPLPLGAD 215 (409)
T ss_pred -------hHHHHHHhhccCceEEEEECCCCCcccc---ccHHHHHHHHhhCCCEEEEeCCcCccc-----ccChhhcCCC
Confidence 6788889999999999999999999999 779999999999999999999987742 1222234444
Q ss_pred CCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
|++.|.+|.++...-=+ |.++++. +++.++++.... ...++++........-|+. +.-+.++.
T Consensus 216 ---IV~hSaTKyi~Ghsdvi~G~iv~n~-------~~~~~~l~~~~~~lg~~~~p~~~~ll~Rglkt-----l~lRi~~~ 280 (409)
T KOG0053|consen 216 ---IVVHSATKYIGGHSDVIGGSVVLNS-------EELASRLKFLQEDLGWCEDPFDLFLLSRGLKT-----LHLRINKH 280 (409)
T ss_pred ---EEEEeeeeeecCCcceeeeEEecCc-------HHHHHHHHHHHHHhcCCCCHHHHHHHhcCcch-----hhhhHHHH
Confidence 89999999987654334 5555531 456666665543 3346666666554443332 23334444
Q ss_pred HHHHHHHHHHhhcCCCcc
Q 014631 322 RDTADICYDRIKEIPCIT 339 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~ 339 (421)
.++.-.+.+.|+..|.++
T Consensus 281 ~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053|consen 281 SENALKIALLLEAHPKVK 298 (409)
T ss_pred HHHHHHHHHHhhhCCcee
Confidence 555555666666554443
No 345
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.77 E-value=8e-16 Score=135.83 Aligned_cols=294 Identities=17% Similarity=0.158 Sum_probs=191.1
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~ 161 (421)
+....|++.|+.+=+ .-.-+.+.+|+.|+..++..+.++||+|+....-|.+.... ++..|.++..+.
T Consensus 62 PT~~vlE~RiAaLEG--------G~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALEG--------GVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhhc--------chhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 345799999999752 22345677889999999999999999999999888876443 467799988875
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
. .|+|.+++.++++||+|++..-.||.+.+ -++++|+++|+++|+++|+|...+.-.+ ..++ ..+
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v---~Die~ia~iAh~~gvpliVDNT~atpyl----~rP~-~hG 198 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDV---LDIEAIAEIAHRHGVPLIVDNTFATPYL----CRPI-EHG 198 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccc---cCHHHHHHHHHHcCCcEEEecCCCccee----cchh-hcC
Confidence 3 37899999999999999999999999999 5699999999999999999998865211 1122 222
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchh----HHHHHH---------------------HHhhh--cccccCC
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ----ELRIVD---------------------SIKGY--LNISSGP 294 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~---------------------~~~~~--~~~~~~~ 294 (421)
. .|++.|.+|+.|..|.-+|-+++......+. +|.+.+ +.+.. +....+.
T Consensus 199 A---DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l 275 (426)
T COG2873 199 A---DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL 275 (426)
T ss_pred C---CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence 2 3889999999999999999888864332221 000000 00000 0111122
Q ss_pred chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-----------------ceeEEEEecCcc
Q 014631 295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-----------------GSMFVMVKLNLS 357 (421)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-----------------~~~~~~~~~~~~ 357 (421)
+++.......-+ +-+.-+.++..++...+.+.|+++|.+..+.+|. .|-.+.+++...
T Consensus 276 sPfnAfl~lqGl-----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg 350 (426)
T COG2873 276 SPFNAFLLLQGL-----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG 350 (426)
T ss_pred CcHHHHHHHhch-----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence 222222221111 2244456778899999999999988776554442 123444555432
Q ss_pred cccCCCChHHHHHHH------H---hhcCeeEEeCCCCCC-------------CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 358 LLEGISDDMEFALQL------A---KEESVIVLPGMAVGM-------------KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 358 ~~~~~~~~~~~~~~l------l---~~~gv~v~~g~~~~~-------------~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
. +....|++.+ . .-+.+++-|.+.-+. ++.||+|++. |+++.+++.|+++++
T Consensus 351 ~----ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl~ 424 (426)
T COG2873 351 Y----EAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQALE 424 (426)
T ss_pred H----HHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHHh
Confidence 1 1223443332 0 123445556543321 5789999986 466667777777765
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
+
T Consensus 425 ~ 425 (426)
T COG2873 425 A 425 (426)
T ss_pred c
Confidence 3
No 346
>PLN02452 phosphoserine transaminase
Probab=99.77 E-value=8.1e-16 Score=143.15 Aligned_cols=328 Identities=14% Similarity=0.136 Sum_probs=212.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
..+++|+-| |. ..|+.|++++++.+.+.. .+...+. ..++-+.+.+.+.+.++++.+-+-+++.
T Consensus 6 ~~~~~f~pG-P~-----~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~--f~~i~~~~~~~L~~l~~~p~~y~v~~l~ 77 (365)
T PLN02452 6 GRVFNFSAG-PA-----TLPANVLAKAQAELYNWEGSGMSVMEMSHRGKE--FLSIIQKAEADLRELLDIPDNYEVLFLQ 77 (365)
T ss_pred CceEeeeCC-CC-----CCCHHHHHHHHHHHhcccccCccccccCCCchH--HHHHHHHHHHHHHHHhCCCCCceEEEEe
Confidence 346788777 33 578899999888754311 1112111 2344444444444444433222345667
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceEEEEeCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
.|+|.++..++..++.+|+++++...++++- ...++..|...+.... +..++ .+++++++. .++.+.+.+++.
T Consensus 78 Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~~--~~~~~~v~~~hn 154 (365)
T PLN02452 78 GGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWEL--TPDAKFVHICAN 154 (365)
T ss_pred CccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcCC--CCCCcEEEECCC
Confidence 8899999999999999999999988777663 5667777764333321 12221 345665422 345677777777
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
...||+.+. +++++. ++++|+|.+.+. +....++..++ +...|.+|.+|.+| +|++++++
T Consensus 155 ETstGv~~~--~~~~i~------~~~lvVDa~Ss~----g~~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr~- 214 (365)
T PLN02452 155 ETIHGVEFK--DYPDVG------NVPLVADMSSNF----LSKPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIRK- 214 (365)
T ss_pred CCCCcEecC--cccccC------CCeEEEECCccc----cCcccCHHHcC-----EEEEecccccCCCC--eEEEEEcH-
Confidence 778999643 344443 389999999987 33334444444 34469999998888 78888853
Q ss_pred CcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 272 SGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
++.+++.. ......+|+....+++.++|+...+. +++.+.++.+++.+++++.|++.+|
T Consensus 215 -------~~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G 287 (365)
T PLN02452 215 -------DLIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNG 287 (365)
T ss_pred -------HHHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 33333221 11223588888899988888764443 7999999999999999999998777
Q ss_pred cccc-CCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 338 ITCP-RKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 338 ~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
+... ..+. ..+.+.+.++.. ....+|+. .++++|+...+|+.-- +.+|+|+- .+.++++++++.+++
T Consensus 288 ~y~~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~-~~~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m~~ 359 (365)
T PLN02452 288 FYVCPVEKSVRSLMNVPFTLGGS-----ELEAEFVK-EAAKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFMKD 359 (365)
T ss_pred cccCCCChHHhCCeEEEEEcCCc-----hhHHHHHH-HHHHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHHHH
Confidence 7311 1112 233455555532 13455655 4588999999987542 23999984 789999999999998
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
+-+++
T Consensus 360 f~~~~ 364 (365)
T PLN02452 360 FQAKH 364 (365)
T ss_pred HHHhc
Confidence 87653
No 347
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.77 E-value=1.6e-15 Score=147.12 Aligned_cols=312 Identities=15% Similarity=0.145 Sum_probs=195.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCC-----------CCCCcEEEcCCHHHHHHHHHHHhc----C-------------
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCK-----------LSPDDVYLTAGCKQAIQVILTVLA----R------------- 131 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~-----------~~~~~i~~~~g~~~al~~~~~~l~----~------------- 131 (421)
..+...+...++++.+.+|+.+..+.. .+...-++|+|||+|+..++.+.. .
T Consensus 119 ~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl 198 (522)
T TIGR03799 119 VKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGL 198 (522)
T ss_pred ceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccc
Confidence 355556667899999999998865311 011235778899888877654321 1
Q ss_pred ---------CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEe--CCCC
Q 014631 132 ---------PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIV--NPGN 193 (421)
Q Consensus 132 ---------~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~--~p~n 193 (421)
++..|++++-+|+++..++...|. +++.+|++. ++.+|+++|++.+. ++++.++++ ..++
T Consensus 199 ~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~--~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt 276 (522)
T TIGR03799 199 FAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDA--NNRIDVDALRDKCAELAEQNIKPLAIVGVAGTT 276 (522)
T ss_pred hhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCC--CCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCc
Confidence 134688899999999999999988 688888753 45799999999875 344444444 5577
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
.||.+ +++++|+++|+++|+++++|.+|++...-.... ..+..+..- ..+..|.||+++ ....+|+++++++.
T Consensus 277 ~tGai---Dpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~a--DSit~d~HK~l~-~P~g~G~llvr~~~ 350 (522)
T TIGR03799 277 ETGNI---DPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERA--DSVTIDAHKQLY-VPMGAGMVLFKDPA 350 (522)
T ss_pred CCCCc---CCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhC--CEEEEChhhcCC-cCcccEEEEEeCHH
Confidence 89999 779999999999999999999998743211100 012222111 255668999743 34558999987532
Q ss_pred cchhHHHHHHHHhhhc--------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 273 GILQELRIVDSIKGYL--------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
+.+.+.... ...++-+.. ...+..+|+.....+++++.++..++++++.+.|++.|++
T Consensus 351 -------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~-al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~ 422 (522)
T TIGR03799 351 -------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGM-AMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDF 422 (522)
T ss_pred -------HHHHhccCcchhcCCCCCccccceeecCcchH-HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCe
Confidence 233332210 011122222 2235555655556789999999999999999999999999
Q ss_pred cccCCCCceeEEEEecCcccccCC----------C-----C--hHHHHHHHHhhcCeeEEeCCCCC-----C--CCeEEE
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGI----------S-----D--DMEFALQLAKEESVIVLPGMAVG-----M--KNWLRI 394 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~----------~-----~--~~~~~~~ll~~~gv~v~~g~~~~-----~--~~~iRi 394 (421)
+++..|.-+ .+.+++........ . + ...+..+ +.+.|.......... . ...+|+
T Consensus 423 el~~~p~l~-iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~-~~~~G~~~vs~t~l~~~~~~g~~~~~lR~ 500 (522)
T TIGR03799 423 ELVTEPELC-LLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKR-QREAGKSFVSRTRLTPAQYDHQPTVVFRV 500 (522)
T ss_pred EEecCCCcc-EEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHH-HHhcCCEEEEEEEecccccCCCCcEEEEE
Confidence 966555444 33344321111000 0 0 0122333 344566554422211 1 246999
Q ss_pred Eec---CCHHHHHHHHHH
Q 014631 395 TFA---IEPSALEEGLGR 409 (421)
Q Consensus 395 ~~~---~~~e~l~~~~~~ 409 (421)
++. ++.++++.+++.
T Consensus 501 ~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 501 VLANPLTTHEILQDILDE 518 (522)
T ss_pred EecCCCCCHHHHHHHHHH
Confidence 997 567888887764
No 348
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.76 E-value=1.6e-15 Score=153.39 Aligned_cols=347 Identities=15% Similarity=0.100 Sum_probs=207.6
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
+++|+..|.-....+...+|++.+++.+++.+.. .+....-..+....+|+.|.+.-+ .-..++++|+++|++|++.
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~--hv~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~ 442 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYG--HVMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEV 442 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCC--ccccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHH
Confidence 5677666532222222358999999999998732 111111123444555555544111 0113689999999999999
Q ss_pred HHHHhcC---------------------CCCeEEEcCCCCcchHHHHhhcCce---------e------EeeeccC----
Q 014631 125 ILTVLAR---------------------PGANILLPKPGFPLYEANARHTRLE---------I------RHFDLLP---- 164 (421)
Q Consensus 125 ~~~~l~~---------------------~gd~Vl~~~p~y~~~~~~~~~~g~~---------~------~~~~~~~---- 164 (421)
+++...+ ...+|+....+|++....+...+.. . ..++.+.
T Consensus 443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~ 522 (817)
T PLN02974 443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR 522 (817)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence 9875421 1246999999999865444433321 0 0010000
Q ss_pred ---------CC----------Ccc-----C------------CHHHHHhhhc-------cCceEEEEeCC--CCCcccc-
Q 014631 165 ---------EK----------GWE-----V------------DLDGLEALAD-------ENTVAMVIVNP--GNPCGNV- 198 (421)
Q Consensus 165 ---------~~----------~~~-----~------------d~e~l~~~~~-------~~~~~i~~~~p--~nptG~~- 198 (421)
.. .|. . ..+.+++.+. .+..+.++..| +.-.|++
T Consensus 523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~ 602 (817)
T PLN02974 523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL 602 (817)
T ss_pred cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence 00 000 0 0134555543 23455667777 5667876
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~ 277 (421)
.+++.++++.++|++||+++|.||+++++++.|..+. ...++...+++ +++|.+ .+| +++|.++++
T Consensus 603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa-~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~-------- 669 (817)
T PLN02974 603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESA-WELLGCKPDIA---CYAKLL-TGGLVPLAATLAT-------- 669 (817)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhh-HHhcCCCCCEE---eecccc-cCCCCccEEEEEc--------
Confidence 4678899999999999999999999999988886542 33344333344 578995 567 699999996
Q ss_pred HHHHHHHhh------h-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHH----HHhhcCCCccccCCCC
Q 014631 278 LRIVDSIKG------Y-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICY----DRIKEIPCITCPRKPE 345 (421)
Q Consensus 278 ~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~----~~l~~~~g~~~~~~~~ 345 (421)
+++.+.+.. . ...+.+.++++++++.+.|+...+ +..++..+..+++.+++. +.|+++|.+..+ . .
T Consensus 670 ~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-R-g 747 (817)
T PLN02974 670 EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-V-S 747 (817)
T ss_pred HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-E-e
Confidence 367776642 1 123568899999999888876332 223333334444444333 344555555423 2 3
Q ss_pred ceeEEEEecCccccc-CC--CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 346 GSMFVMVKLNLSLLE-GI--SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~-~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
-|.+..+++...... +. .....+...++.++||+++|. .+.+|+.++ .++++++++++.|.+.+
T Consensus 748 ~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 748 LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 356777777532110 00 012234444432789999884 257887665 78999999999998876
No 349
>PRK15029 arginine decarboxylase; Provisional
Probab=99.76 E-value=1.1e-15 Score=152.33 Aligned_cols=236 Identities=10% Similarity=-0.008 Sum_probs=153.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
...+.+.++..|+.++ .....++++|+|.++..++.+++++||+|+++..+|-+..+++...|+.++++....
T Consensus 204 ~G~I~eAq~~aA~~fg-------A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~~ 276 (755)
T PRK15029 204 TGAFGESEKYAARVFG-------ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPSR 276 (755)
T ss_pred CcHHHHHHHHHHHHhC-------CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc
Confidence 3335688888888773 245678899999999999999999999999999999999999999999999986432
Q ss_pred CCCc----cCC-----HHHHHhhhcc--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631 165 EKGW----EVD-----LDGLEALADE--NTV--------AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 165 ~~~~----~~d-----~e~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
+.+ +++ ++.+++++.. ..+ ++++++|+. .|++ .++++|+++|+++++.|++||||+
T Consensus 277 -~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhG 351 (755)
T PRK15029 277 -NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVC---YNAKEAQDLLEKTSDRLHFDEAWY 351 (755)
T ss_pred -cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-ccee---eCHHHHHHHHHhcCCeEEEECccc
Confidence 232 234 8889887743 234 899999987 8898 568999999999999999999997
Q ss_pred ccccCCCCccccccc-----C-CCCCEEEEcccccccCCCCceEEEEEee-CCCcchhHHHHHHHHhhhcccccCCchHH
Q 014631 226 HLTFGSTPYVRMGVF-----G-STVPVITLGSMSKRWIVPGWRLGWLVTS-DPSGILQELRIVDSIKGYLNISSGPATFV 298 (421)
Q Consensus 226 ~~~~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (421)
.+..-...++....+ . ....++++.|.||+ ++++.-|.++.- ++....+...+.+.+.-.. +++|+.+.
T Consensus 352 ah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~q--STSPSY~L 427 (755)
T PRK15029 352 GYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLYAI 427 (755)
T ss_pred cccccCccccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHc--CCCcHHHH
Confidence 754222222221222 1 11234889999999 456655554432 2211222223333333222 34666666
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
.+.+..+........-.+..+...+....+++.+.+++
T Consensus 428 mASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~~ 465 (755)
T PRK15029 428 CASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLY 465 (755)
T ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcc
Confidence 66555443321111223334444455555555555443
No 350
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.76 E-value=3.1e-15 Score=153.84 Aligned_cols=308 Identities=16% Similarity=0.119 Sum_probs=193.3
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHHHH---HHHHh-cCCCC----eEEEcCCCCcchHHHHhhcCce
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAIQV---ILTVL-ARPGA----NILLPKPGFPLYEANARHTRLE 156 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al~~---~~~~l-~~~gd----~Vl~~~p~y~~~~~~~~~~g~~ 156 (421)
+|+.++...+.+|+.+..|. +++.+.++ |+++... +++.+ .++|+ +|++++..|.+....+...|.+
T Consensus 538 qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~~ 613 (954)
T PRK05367 538 AGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGMK 613 (954)
T ss_pred HHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCCE
Confidence 35667777777888776663 35766654 4444423 33332 24565 5999999998888888999999
Q ss_pred eEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP 233 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 233 (421)
++.++.+.+ +.+|+++|++.+++ ++.+|++++|++-++.. +++++|+++|+++|+++++|.++......
T Consensus 614 vv~v~~d~~--G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e---~~I~eI~~i~h~~G~~v~VDgA~~~al~~--- 685 (954)
T PRK05367 614 VVVVACDEN--GNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFE---ETIREICEIVHEHGGQVYLDGANMNAQVG--- 685 (954)
T ss_pred EEEECCCCC--CCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeec---CCHHHHHHHHHHcCCEEEEECcChhhccC---
Confidence 999987543 46999999998865 35677888888754444 45999999999999999999999642211
Q ss_pred cccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhhhc---------ccccCCchH---
Q 014631 234 YVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKGYL---------NISSGPATF--- 297 (421)
Q Consensus 234 ~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~--- 297 (421)
......++.+ ++..|++|+|+. +|..+|.+.+.+. +...+.... ..+...+..
T Consensus 686 l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~a 754 (954)
T PRK05367 686 LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGSA 754 (954)
T ss_pred CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHHH
Confidence 1111223333 778899999763 3445888887521 221111100 000111112
Q ss_pred -HHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE--EEEecCcccccCCCChHHHHHHHHh
Q 014631 298 -VQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF--VMVKLNLSLLEGISDDMEFALQLAK 374 (421)
Q Consensus 298 -~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ll~ 374 (421)
....+..++.....+++.+..+..-.+.+++.+.|++...+. ...|.+..+ +.+.++...........++..+| .
T Consensus 755 l~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL-~ 832 (954)
T PRK05367 755 SILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL-I 832 (954)
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-H
Confidence 222233344444467777877777799999999998742332 212221111 22223211000011356777766 7
Q ss_pred hcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 375 EESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 375 ~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++|+.... ..|...+.+||+++ ++++||+++++++.++.++..+
T Consensus 833 d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 833 DYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 78998754 33445788999997 7899999999999988877654
No 351
>PLN02263 serine decarboxylase
Probab=99.76 E-value=8.3e-15 Score=138.36 Aligned_cols=294 Identities=14% Similarity=0.021 Sum_probs=200.8
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
+..++++.+.+|+.+.+|.+.+...-++|+|||+++...+.+..+ +...+++++.+|++...++..+|.+++.+|.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 457999999999999888543222458899999999888766543 33478889999999999999999999999875
Q ss_pred CCCccCCHHHHHhhhccCc---eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc-----EEEEcccccccccC-CCCcc
Q 014631 165 EKGWEVDLDGLEALADENT---VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI-----MVISDEVYDHLTFG-STPYV 235 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~~~---~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~-~~~~~ 235 (421)
.++.+|+++|++.+.+++ .+|+.+.++.++|.+ +++++|.++|+++|+ ++++|.+|+++... -....
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAi---Dpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAV---DDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCC---CCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 356799999999886543 345566778899999 999999999999997 99999999886531 01111
Q ss_pred cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhh
Q 014631 236 RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFK 307 (421)
Q Consensus 236 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~ 307 (421)
.+.....- . =+..+.||+ +.....+|.++.+++. .+.+.... ...++-+......+...|.
T Consensus 285 ~~df~~~v-D-SIsvD~HK~-l~~P~~cgvll~R~~~--------~~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~ 353 (470)
T PLN02263 285 KVTFKKPI-G-SVSVSGHKF-VGCPMPCGVQITRMEH--------INVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLN 353 (470)
T ss_pred ccCCCcCc-c-EEEECCccc-cCCCcCEEEEEEehhh--------HhhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHH
Confidence 11111111 1 223489999 5666889999997421 12221110 1111112122344445565
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631 308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
....+++.+..++..++.+++.+.|++. ++..+..|... .+.+.-+ .+.. ..+|..+.+
T Consensus 354 ~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~-~V~f~~p--------~~~~------~~~gW~L~~----- 412 (470)
T PLN02263 354 RKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSS-TVVFERP--------KDEE------FVRRWQLAC----- 412 (470)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCce-EEEEecC--------chHH------hhcceEEcc-----
Confidence 5557888899999999999999999988 66655556543 3333322 1111 124665554
Q ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++.+++++. .+.+.++++++.|++.....
T Consensus 413 ~~~~~Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 413 QGNIAHVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred CCCcEEEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 1356898886 58899999999999887643
No 352
>PRK04311 selenocysteine synthase; Provisional
Probab=99.75 E-value=3.6e-15 Score=142.65 Aligned_cols=324 Identities=14% Similarity=0.077 Sum_probs=193.6
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC-----CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPS-----VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA 134 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~-----~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 134 (421)
.+.++.+.+++.+.+.......|... .-+..+++.++++++ .+..+++++++.|+++++.++ .+||
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~G--------ae~a~vv~sgtaAl~l~l~~l-~~Gd 166 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALTG--------AEDALVVNNNAAAVLLALNAL-AAGK 166 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHhC--------CCeEEEECCHHHHHHHHHHHh-CCCC
Confidence 45789999999998865422122211 113578888888873 346778888889999988665 7999
Q ss_pred eEEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC--cccccCHHHHHH
Q 014631 135 NILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP--CGNVFTYQQLQK 206 (421)
Q Consensus 135 ~Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~ 206 (421)
+|++++..+.. +.......|++++.++... ..++++++++++++++++++++++|+ +|..- ..++++
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~-~~dl~e 241 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTK-EVSLAE 241 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCC-cCCHHH
Confidence 99999865542 1234567899988886532 24789999999999999999999998 35321 146999
Q ss_pred HHHHHHhcCcEEEEcccccccc----cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 207 IAEKARKLGIMVISDEVYDHLT----FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
|+++|++||+++|+|...+.+. ++-.....+...-..+-.++++|.+|.++.+ ..|+++++ +++++
T Consensus 242 I~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~li~ 311 (464)
T PRK04311 242 LAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KELIA 311 (464)
T ss_pred HHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEc--------HHHHH
Confidence 9999999999999999654331 1100111111211112238889999997655 48999885 35666
Q ss_pred HHhhhcc-cccCCchHHHHHHHHHhhcc---c--------hhHHHHHHHHHHHHHHHHHHHhhcCC--Cc--cccCC---
Q 014631 283 SIKGYLN-ISSGPATFVQGAVPQIFKNT---K--------EDFFSKIVDILRDTADICYDRIKEIP--CI--TCPRK--- 343 (421)
Q Consensus 283 ~~~~~~~-~~~~~~~~~~~~~~~~l~~~---~--------~~~~~~~~~~~~~~~~~~~~~l~~~~--g~--~~~~~--- 343 (421)
+++.... ...........++.+++... . ...+....++++++.+.+.+.|++.+ ++ .+...
T Consensus 312 ~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~ 391 (464)
T PRK04311 312 RLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQ 391 (464)
T ss_pred HHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCc
Confidence 6653221 01112223333333333210 0 11123334667778888888887653 22 21100
Q ss_pred CCce-------eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHH
Q 014631 344 PEGS-------MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 344 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~ 415 (421)
..+| .-.-+.++.. .....++.. .+++....|..- -..+.+.+.+. ..++|++.++++|.+++.
T Consensus 392 ~gggs~p~~~~~~~~v~~~~~----~~~~~~l~~-~lr~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~~~~~ 463 (464)
T PRK04311 392 VGGGSLPVDRLPSAAVTLTPK----DRSLEALAA-RLRLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALLEALN 463 (464)
T ss_pred cCCCCCcCCCCCeEEEEEeCC----CCCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 0111 1111223211 113444444 456644333321 12466777775 678899999999988764
No 353
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.73 E-value=5.9e-15 Score=148.22 Aligned_cols=311 Identities=13% Similarity=0.110 Sum_probs=193.8
Q ss_pred CCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC-CHHHHHHHHHHHhc-------CCC-CeEEEcCCCCcchH
Q 014631 80 DCYSP---SVGILPARRAIADYLNSELPCKLSPDDVYLTA-GCKQAIQVILTVLA-------RPG-ANILLPKPGFPLYE 147 (421)
Q Consensus 80 ~~y~~---~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~-g~~~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~ 147 (421)
+-|.| .+|+-++-..+.+++.+..|. +.+-+.+ +|+++....+.++. +++ ++|+++...|.+..
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGm----d~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGF----DAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCC----CeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 46666 677777767777777665553 3345554 45555545554432 133 67889998887766
Q ss_pred HHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc
Q 014631 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 224 (421)
..+...|++++.++.+. ++.+|+++|++.++ +++.+|.+++|++-++.. +++++|+++|+++|+++++|.++
T Consensus 606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 66888899999999763 33699999999986 567778888988755554 77999999999999999999999
Q ss_pred cccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhhh------------c
Q 014631 225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKGY------------L 288 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~~------------~ 288 (421)
.... ........++.+ ++.++++|+|+.| |.-+|.+.+.+ .+...+... .
T Consensus 681 ~~a~---~~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g 746 (954)
T PRK12566 681 LNAQ---VGLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG 746 (954)
T ss_pred hhhc---cCCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence 6411 111122344444 8889999998643 34456655532 111111110 1
Q ss_pred ccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-EEEEecCccccc--CCC
Q 014631 289 NIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-FVMVKLNLSLLE--GIS 363 (421)
Q Consensus 289 ~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~~~~~~~~~~~~--~~~ 363 (421)
... ...+.....++..++.....+ +.+.......+.+++.+.|.+..++. . .+..+. +.-+.+....++ ...
T Consensus 747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~ 823 (954)
T PRK12566 747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGI 823 (954)
T ss_pred ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCC
Confidence 010 111212233334444433334 55555556778899999998743433 2 332222 221212111111 112
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+..++..+|+ ++|+.... ..|...+.+|++++ ++++|||+++++|+++.++..
T Consensus 824 ~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~~ 878 (954)
T PRK12566 824 SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 4567777776 78997644 34445789999998 899999999999999888754
No 354
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.73 E-value=1.7e-16 Score=147.50 Aligned_cols=237 Identities=16% Similarity=0.178 Sum_probs=149.5
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK 166 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 166 (421)
-+.+.++..|+.++. ....++++|+|.++..++.+++++||+|+++..+|.+...++...|+.+++++.. .+
T Consensus 67 ~I~eAe~~aA~~fGA-------d~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~p~-~~ 138 (417)
T PF01276_consen 67 IIKEAEELAARAFGA-------DKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIPPE-DN 138 (417)
T ss_dssp HHHHHHHHHHHHHTE-------SEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEEEE-E-
T ss_pred HHHHHHHHHHHhcCC-------CeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEecCC-cc
Confidence 356888888888842 4567889999999999999999999999999999999999999999999998764 33
Q ss_pred Cc----cCCH-----HHHHhhhcc--CceE---EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCC
Q 014631 167 GW----EVDL-----DGLEALADE--NTVA---MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGS 231 (421)
Q Consensus 167 ~~----~~d~-----e~l~~~~~~--~~~~---i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~ 231 (421)
.+ ++++ +.+++.+++ ..++ +++++|+. .|++ .++++|+++|+++++.|++||||+... |.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~---~di~~I~~~~h~~~~~llvDEAhGah~~F~- 213 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVC---YDIKEIAEICHKHGIPLLVDEAHGAHFGFH- 213 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEE---E-HHHHHHHHCCTECEEEEE-TT-TTGGCS-
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEE---ECHHHHHHHhcccCCEEEEEccccccccCC-
Confidence 32 3566 888887754 3445 89999997 8999 569999999999999999999997643 33
Q ss_pred CCcccccccCC----CCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHh
Q 014631 232 TPYVRMGVFGS----TVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIF 306 (421)
Q Consensus 232 ~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 306 (421)
.-+.+...++. +..++++.|.||.+ +++. .+++-+.+... .+...+.+.+.... +++|+.+..+.+..+.
T Consensus 214 ~lp~~a~~~gad~~~~~~~~vvqS~HKtL--~altQts~lh~~~~~~-v~~~~~~~~l~~~~--TTSPSY~lmASlD~a~ 288 (417)
T PF01276_consen 214 PLPRSALALGADRPNDPGIIVVQSTHKTL--PALTQTSMLHVKGDRI-VDHERVNEALSMHQ--TTSPSYPLMASLDVAR 288 (417)
T ss_dssp GGGTTCSSTTSS-CTSBEEEEEEEHHHHS--SS-TT-EEEEEETCCC-TTHHHHHHHHHHHS---SS--HHHHHHHHHHH
T ss_pred CCccchhhccCccccccceeeeechhhcc--cccccceEEEecCCCc-ccHHHHHHHHHHHc--CCChHHHHHHHHHHHH
Confidence 11111111221 23468889999993 5554 45565554321 22233433333332 3467777666655544
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHh---hcCCCcccc
Q 014631 307 KNTKEDFFSKIVDILRDTADICYDRI---KEIPCITCP 341 (421)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~g~~~~ 341 (421)
.......-++..++..++.+.+++.+ +++.++.++
T Consensus 289 ~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~ 326 (417)
T PF01276_consen 289 AQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFKVL 326 (417)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSEES
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEecC
Confidence 32212222333444445555555555 556566643
No 355
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.72 E-value=3.5e-14 Score=143.64 Aligned_cols=314 Identities=13% Similarity=0.076 Sum_probs=196.8
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--------CCCCeEEEcCCCCcchH
Q 014631 79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA--------RPGANILLPKPGFPLYE 147 (421)
Q Consensus 79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~~ 147 (421)
.+-|.|. +|+.++...+..|+.+..|.+ .--+..++|.++-...+.++. ...++|+++...|...-
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd---~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD---AISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC---CcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 3455543 456677777777777766644 222334455554443332222 12257899999998777
Q ss_pred HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEccc
Q 014631 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~ 223 (421)
..+...|++++.++.+ .++.+|+++|++.+++ ++++|++++|+| +|.+ ++ +++|+++|+++|..+++|.+
T Consensus 593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~---e~~I~eI~~iah~~G~~v~VDgA 666 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVF---EPTIQHACDIVHSFGGQVYLDGA 666 (939)
T ss_pred HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Ccee---cccHHHHHHHHHHcCCEEEEEec
Confidence 7788999999999875 3446999999999864 788999999999 7888 55 99999999999999999999
Q ss_pred ccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHHHHHHHhh------------h
Q 014631 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELRIVDSIKG------------Y 287 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~~~~------------~ 287 (421)
+..... .......++.+ ++++|.+|+|+. +|..+|++.+.+. +...+.. .
T Consensus 667 q~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~--------L~~~lPg~~v~~t~d~~gre 732 (939)
T TIGR00461 667 NMNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSH--------LIPFLPKHDVVSMITGIGGS 732 (939)
T ss_pred ChhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhh--------chhhcCCCcccccccCCCCc
Confidence 965211 11122233333 788899997762 4556899998631 1111110 0
Q ss_pred ---cccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-E--EEEecCcccc
Q 014631 288 ---LNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-F--VMVKLNLSLL 359 (421)
Q Consensus 288 ---~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-~--~~~~~~~~~~ 359 (421)
.... ...+......+..+|.....+++.+..+..-.+.+++.++|++. +.+......+. + +.++++....
T Consensus 733 q~Iga~s~~~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~ 810 (939)
T TIGR00461 733 KSIGSVSAAPYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKA 810 (939)
T ss_pred cccccccccccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhh
Confidence 0000 11222333444445554456788888888889999999999873 45332222222 2 2234432100
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe--cCCHHHHHHHHHHHHHHHHHhhh
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF--AIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~--~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.......++..+| .++|+.-.. ..|-..+.+-|.+ ..++++||++++++.++-++..+
T Consensus 811 ~~g~~~~dIakrL-~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 811 KTGIEAIDVAKRL-QDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred hcCCCHHHHHHHH-HhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 0012456777776 567987533 3343344544444 48899999999999888776543
No 356
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.70 E-value=1.4e-14 Score=134.97 Aligned_cols=313 Identities=15% Similarity=0.078 Sum_probs=191.5
Q ss_pred HHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCc
Q 014631 66 AADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFP 144 (421)
Q Consensus 66 v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~ 144 (421)
.++++.+.+-.. +.+.+. ..++-+.+.+.+.+.++.+.+.+-+++++|||.+++.++..++ ++|++|++.. .|.
T Consensus 19 ~~~~~~~~~~~~--~HRs~~--F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLGR--SHRSKL--GKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhccc--CcCCHH--HHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 666666544332 123222 3455444455555555532222235678999999999999998 5889998854 333
Q ss_pred c-hH-HHHhhcCce-eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 145 L-YE-ANARHTRLE-IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 145 ~-~~-~~~~~~g~~-~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
. +. .+++..|.+ +..+...+ +..+++++++. . +.+++++.-..||+..|. ++++..+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~~~--g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv---~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEAEY--GKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPN---GDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcCCC--CCCCCHHHcCC--C---CCEEEecCCCchheeccc---ccccccc--CCCcEEEE
Confidence 2 24 778889984 67776443 33478888873 1 235677776789999664 4444222 58999999
Q ss_pred ccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhh---------------
Q 014631 222 EVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKG--------------- 286 (421)
Q Consensus 222 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~--------------- 286 (421)
.+.+.. .....+..+| +++.|..|.+++|+ .++++++++. ..++.+.
T Consensus 162 avSs~g----~~~l~~d~iD-----v~~tgsQK~L~~pp-Gls~v~vs~~--------Al~~~~~~~~y~~~~~~~~~~~ 223 (374)
T TIGR01365 162 ATSAAF----AQDLDYHKLD-----VVTFSWQKVLGGEG-AHGMLILSPR--------AVARLESYTPAWPLPKIFRLTK 223 (374)
T ss_pred ccchhc----CCCCChhHCc-----EEEEechhccCCCC-ceEEEEECHH--------HHHHHhhcCCCCCChhhhcccc
Confidence 998873 2223333322 77888999988653 2677777532 2222110
Q ss_pred --------h-cccccCCchHHHHHHHHHhhccch-hHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-CC-cee-EEEEe
Q 014631 287 --------Y-LNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDILRDTADICYDRIKEIPCITCPRK-PE-GSM-FVMVK 353 (421)
Q Consensus 287 --------~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-~~-~~~-~~~~~ 353 (421)
. .....+|+....+++..+|+...+ .+++.+.++++++++.+++.++++..+..... +. .+. ...+.
T Consensus 224 ~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~ 303 (374)
T TIGR01365 224 GGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLK 303 (374)
T ss_pred ccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEE
Confidence 0 112235555566666666653333 37999999999999999999999832553311 21 122 23334
Q ss_pred cCcccccCCC-C-----hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 354 LNLSLLEGIS-D-----DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 354 ~~~~~~~~~~-~-----~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
++........ + ..++ ...++++||.+.+|..-..++.+||+.. .+.+|++.+++.|.=+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~ 371 (374)
T TIGR01365 304 VVDPAIDALDEDAQADFAKEL-ISTLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAF 371 (374)
T ss_pred eCCccccccccchhhHHHHHH-HHHHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHH
Confidence 4322110000 1 2344 4456778999998876555688999865 78999999999887543
No 357
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.68 E-value=1.2e-13 Score=131.74 Aligned_cols=317 Identities=14% Similarity=0.083 Sum_probs=183.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCC-----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSP-----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA 134 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~-----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd 134 (421)
.+.++.+.+++.+.+.......|.- ..-+..+++.++++++ . +..+++++++.|+.+++.+ +.+||
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~g------a--e~alvv~sg~aAi~l~l~~-l~~Gd 161 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELTG------A--EDALVVNNNAAAVLLALNT-LAKGK 161 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHhC------C--CcEEEECCHHHHHHHHHHH-hCCcC
Confidence 3568999999999887532222321 1114688888888873 2 3356677888899988855 57999
Q ss_pred eEEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc--cc--ccCHHHH
Q 014631 135 NILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC--GN--VFTYQQL 204 (421)
Q Consensus 135 ~Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt--G~--~~~~~~l 204 (421)
+|++++..|.. +.......|++++.++.+. ..++++++++++++++++++.+++|++ |. . .++
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~---~dl 234 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEE---VSI 234 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCC---CCH
Confidence 99999876532 1234567899988886532 247899999999999999999999985 53 4 459
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCC----CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGS----TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
++|+++|++||+++++|...+.+.-.+ ...+.+......+-.+++.|.+|+++.+ ..|+++++ +++
T Consensus 235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~--------~~~ 304 (454)
T TIGR00474 235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGK--------KEL 304 (454)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEEC--------HHH
Confidence 999999999999999997643321000 0001111111111228888999997655 47999885 245
Q ss_pred HHHHhhhccc-ccCCchHHHHHHHHHhhcc---ch--------hHHHHHHHHHHHHHHHHHHHhhcC--CCccc--cCCC
Q 014631 281 VDSIKGYLNI-SSGPATFVQGAVPQIFKNT---KE--------DFFSKIVDILRDTADICYDRIKEI--PCITC--PRKP 344 (421)
Q Consensus 281 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~---~~--------~~~~~~~~~~~~~~~~~~~~l~~~--~g~~~--~~~~ 344 (421)
+++++..... ..........++.+.+... .+ .-+....++++++.+.+.+.|++. +++.+ ...+
T Consensus 305 i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~ 384 (454)
T TIGR00474 305 IERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPGL 384 (454)
T ss_pred HHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEcC
Confidence 5544332210 0111222222222222210 01 122233456666777777777764 34321 1011
Q ss_pred ---Ccee-------EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHH
Q 014631 345 ---EGSM-------FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRI 410 (421)
Q Consensus 345 ---~~~~-------~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l 410 (421)
.+|. -.-+.+... ..+..++.. .+++....|... -..+.+.+.+. ..++|++.++++|
T Consensus 385 ~~~ggg~~p~~~l~~~~v~~~~~----~~~~~~l~~-~lr~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 385 SQVGGGSLPDERLPSYAVTLTPD----GLSAEKLEA-RLRELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CcccCCCCcCCCCCeEEEEEecC----CCCHHHHHH-HHhcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1111 111222211 113445544 456666433321 12466777775 6778888887765
No 358
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=1.2e-13 Score=127.14 Aligned_cols=325 Identities=16% Similarity=0.131 Sum_probs=205.3
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.++|+-| |+ ..|++|.+++++.+.+.. .+...+. ..++-+.+.+.+++.++++.+-+-+++.+|
T Consensus 5 ~~nF~aG-Pa-----~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~--F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~Gg 76 (364)
T PRK12462 5 QLNFSGG-PG-----ALPDTVLEQVRQAVVELPETGLSVLGMSHRSSW--FSSLLAQAEADLRDLLGIPDEYGVVFLQGG 76 (364)
T ss_pred cceecCC-Cc-----CCCHHHHHHHHHHHhcccccCccccccccccHH--HHHHHHHHHHHHHHHhCCCCCCeEEEEecc
Confidence 5678777 33 467888888887765411 1122221 234444444445555554323333455666
Q ss_pred HHHHHHHHHHHhcCCCCeEE-EcCCCCcc--hHHHHhhcCceeEeeeccCCCC--ccCCHHHHHhhhccCceEEEEeCCC
Q 014631 118 CKQAIQVILTVLARPGANIL-LPKPGFPL--YEANARHTRLEIRHFDLLPEKG--WEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl-~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
+|.++..+...++++||+++ +...++.+ +...++..| ++..+......+ ..++++++ .+.++.+.+.+++-.
T Consensus 77 gT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NE 153 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNE 153 (364)
T ss_pred HHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCC
Confidence 99999999999999999765 55555554 355566666 544443211212 22445554 233456677777777
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
..||+..+ ++.+.++.++|+|.+.+.+. ...++..++ +++.+..|.+|.|| ++.+++++
T Consensus 154 TstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~d-----vi~agsQKnlgP~G--ltvvivs~-- 212 (364)
T PRK12462 154 TVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAYG-----MVYAHAQKNLGPAG--VTVAIIRR-- 212 (364)
T ss_pred CCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHcc-----EEEeeccccCCCCc--eEEEEECH--
Confidence 78899875 23334689999999987732 233444442 66778899999777 67888763
Q ss_pred cchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh--HHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 273 GILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED--FFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 273 ~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+++++... ......+|+....+++..+++...++ +++.+.++.+++++.+++.+.+.++
T Consensus 213 ------~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~ 286 (364)
T PRK12462 213 ------ALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNE 286 (364)
T ss_pred ------HHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 22222111 11233588888899988888765444 8999999999999999999999876
Q ss_pred cccc-CCCCc--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 338 ITCP-RKPEG--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 338 ~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
+... ..+.. .+-+.+++.... ...+|+. .++++|+.-.-|+. .-+.+|+|+= .+.|.++++++-+++
T Consensus 287 ~~~~~~~~~~RS~mnv~f~~~~~~-----l~~~f~~-~a~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~ 358 (364)
T PRK12462 287 VIDCHAHRAARSTMNVAFRFRQPR-----LDTLFKE-QSTEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKD 358 (364)
T ss_pred cccCCCChhhcCcceEEEEcCCHH-----HHHHHHH-HHHHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHH
Confidence 5521 12222 234444554321 2445555 46888998877764 2467999984 788999998888888
Q ss_pred HHHH
Q 014631 413 FCQR 416 (421)
Q Consensus 413 ~~~~ 416 (421)
+-++
T Consensus 359 f~~~ 362 (364)
T PRK12462 359 FAIR 362 (364)
T ss_pred HHHh
Confidence 7654
No 359
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.67 E-value=3.8e-14 Score=139.90 Aligned_cols=165 Identities=13% Similarity=0.159 Sum_probs=119.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-HhhcCceeEeeeccCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN-ARHTRLEIRHFDLLPEK 166 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~~~~~ 166 (421)
+.+.++..|+.++ ....-++++|+|.++..++.+++.+||.|+++..+|-+..+. ..+.|+.++++.... +
T Consensus 176 i~eAq~~AA~~fg-------Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PVYl~P~~-n 247 (720)
T PRK13578 176 AKDAQKHAAKVFN-------ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETAR-N 247 (720)
T ss_pred HHHHHHHHHHHhC-------CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEEEeeccc-c
Confidence 5577777777763 245678899999999999999999999999999999998885 889999999987543 3
Q ss_pred Ccc----CCHHH-----HHhhhccC----------ceEEEEeCCCCCcccccCHHHHHHHHHH-HHhcCcEEEEcccccc
Q 014631 167 GWE----VDLDG-----LEALADEN----------TVAMVIVNPGNPCGNVFTYQQLQKIAEK-ARKLGIMVISDEVYDH 226 (421)
Q Consensus 167 ~~~----~d~e~-----l~~~~~~~----------~~~i~~~~p~nptG~~~~~~~l~~i~~~-~~~~~~~li~De~~~~ 226 (421)
.++ ++.++ +++++... .+++++++|+. -|+++ ++++|+++ ++.++ +|++||||+.
T Consensus 248 ~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~y---di~~I~~~~~h~~~-~llvDEAhga 322 (720)
T PRK13578 248 PFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIY---NARQVVDKIGHLCD-YILFDSAWVG 322 (720)
T ss_pred ccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceee---cHHHHHHHhhccCC-cEEEeCcchh
Confidence 333 45444 77776543 47889999987 89995 47888887 67778 9999999977
Q ss_pred cc-cCCC--Ccccc-cccCCC-CCEEEEcccccccCCCCceEEEEE
Q 014631 227 LT-FGST--PYVRM-GVFGST-VPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 227 ~~-~~~~--~~~~~-~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+. |... .+++. ...+.+ ..++++.|.||. ++++.-+.++
T Consensus 323 h~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~L 366 (720)
T PRK13578 323 YEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQI 366 (720)
T ss_pred hhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhh
Confidence 54 3321 12111 122332 346888999999 4565444443
No 360
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.66 E-value=5.4e-14 Score=131.81 Aligned_cols=269 Identities=17% Similarity=0.142 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-----CCcEEEcCCHHHHHHHHHHHhcC-------
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-----PDDVYLTAGCKQAIQVILTVLAR------- 131 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-----~~~i~~~~g~~~al~~~~~~l~~------- 131 (421)
..+.+.+...++. +...|...+...++++.+.+|+.+.+|.+.. ...-++|+|||+++...+.+..+
T Consensus 54 ~i~~~~l~~~~n~-n~~~~~~~P~~~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~ 132 (373)
T PF00282_consen 54 SILADLLASALNQ-NGFTWEASPAATEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSK 132 (373)
T ss_dssp HHHHHHHHHHHT--BTTSTTTSHHHHHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcc-cccccccccccccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhh
Confidence 3344445555543 3445555555789999999999999987621 24568899999998777644321
Q ss_pred -CC------CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---C--ce-EEEEeCCCCCcccc
Q 014631 132 -PG------ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---N--TV-AMVIVNPGNPCGNV 198 (421)
Q Consensus 132 -~g------d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~--~~-~i~~~~p~nptG~~ 198 (421)
.| -.|++++-+|+++..++...|.+++.+|.++ ++.+|+++|++.+.+ + +. .|+.+.++..||.+
T Consensus 133 ~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~ 210 (373)
T PF00282_consen 133 AKGVEEIPKPVIYVSEQAHYSIEKAARILGLGVRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAI 210 (373)
T ss_dssp HHTTTHCSSEEEEEETTS-THHHHHHHHTTSEEEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB
T ss_pred hcccccccccccccccccccHHHHhcceeeeEEEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccc
Confidence 12 2577778899999999999999999998865 457999999887643 2 23 45566778889999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
+++++|.++|+++|+++++|.+|++..+- ......+..++.-+ -| ..++||++ .....+|+++.+++..
T Consensus 211 ---D~l~~i~~i~~~~~~wlHVDaA~gg~~~~~~~~~~~~~gi~~ad-Si-t~d~HK~l-~~P~~~~~~l~r~~~~---- 280 (373)
T PF00282_consen 211 ---DPLEEIADICEKYNIWLHVDAAYGGSALLSPEYRHLLFGIERAD-SI-TIDPHKWL-GVPYGCGVLLVRDKSD---- 280 (373)
T ss_dssp ----SHHHHHHHHHHCT-EEEEEETTGGGGGGHCTTGGGGTTGGGES-EE-EEETTTTT-S-SSS-EEEEESSGGG----
T ss_pred ---cCHHHHhhhccccceeeeeccccccccccccccccccccccccc-cc-ccchhhhh-cCCccceeEEeecccc----
Confidence 99999999999999999999999983321 11111111222111 13 33799995 5557899999976432
Q ss_pred HHHHHHHhhhc-----------------ccccCCch-HHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 278 LRIVDSIKGYL-----------------NISSGPAT-FVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 278 ~~~~~~~~~~~-----------------~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+...+.... ..+...+. .....+...|.....+++.+..++..++.+++.+.|++.++++
T Consensus 281 --l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~e 358 (373)
T PF00282_consen 281 --LRDAFSINADYLGNDDRESDESYDYGDYTLQGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFE 358 (373)
T ss_dssp --HHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE
T ss_pred --hHHHhccChhhhcccccccccccccccccccccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 222111000 00111122 2233334445544568889999999999999999999998888
Q ss_pred ccCCCCce
Q 014631 340 CPRKPEGS 347 (421)
Q Consensus 340 ~~~~~~~~ 347 (421)
++..|.-+
T Consensus 359 l~~~~~~~ 366 (373)
T PF00282_consen 359 LVNEPDLN 366 (373)
T ss_dssp ESSTTSSS
T ss_pred EEcCCCce
Confidence 66555544
No 361
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.66 E-value=6.2e-14 Score=138.29 Aligned_cols=305 Identities=12% Similarity=0.068 Sum_probs=180.5
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
+.+.++..|+.++ ....-++++|+|.++..++.+++.+||.|+++..+|-+..+++.+.|+.+++++... +.
T Consensus 197 i~eAe~~AA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl~P~r-n~ 268 (714)
T PRK15400 197 HKEAEEYIARVFN-------ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYFRPTR-NA 268 (714)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEecccc-cc
Confidence 4577777787763 234678899999999999999999999999999999999999999999999987543 33
Q ss_pred cc----CC-----HHHHHhhhccC--ce---EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-cCCC
Q 014631 168 WE----VD-----LDGLEALADEN--TV---AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT-FGST 232 (421)
Q Consensus 168 ~~----~d-----~e~l~~~~~~~--~~---~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~ 232 (421)
++ ++ .+.+++.+... .+ .+++++|+. -|++++ +++|+++|+.++ |++||||+.+. |...
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwgah~~F~p~ 342 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSPI 342 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchhhhccCcc
Confidence 32 34 78888877542 23 688999976 899954 677788888777 68999998754 3321
Q ss_pred C--ccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc
Q 014631 233 P--YVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT 309 (421)
Q Consensus 233 ~--~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 309 (421)
- ..++... +.++.++++.|.||. ++++.-+.++.-... .+...+.+.+.-. .+++|+.+..+.+..+....
T Consensus 343 ~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg~--vd~~~~n~a~~m~--~STSPsY~l~ASLD~a~~~m 416 (714)
T PRK15400 343 YEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKGD--VNEETFNEAYMMH--TTTSPHYGIVASTETAAAMM 416 (714)
T ss_pred cCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcCC--CCHHHHHHHHHHH--cCCCcHHHHHHHHHHHHHHH
Confidence 1 1122211 112456888999999 456544433321111 2112233322222 23466666555544433211
Q ss_pred chhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCCc----------------e-------------eEEEEec
Q 014631 310 KEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPEG----------------S-------------MFVMVKL 354 (421)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~~----------------~-------------~~~~~~~ 354 (421)
....-++..+...+....+++.+.++++ +.++ .|+. | .=+++..
T Consensus 417 ~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~Klti~t 495 (714)
T PRK15400 417 KGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTLLT 495 (714)
T ss_pred HhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCcccccccccccCCceEEEEe
Confidence 1112233344444555555666655544 4322 1110 0 0111222
Q ss_pred Cccccc----CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 355 NLSLLE----GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 355 ~~~~~~----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+..... ...-+...+.+.|+++||.+.-...+ .--+-++++.++++++.++++|.++-+
T Consensus 496 pgi~~~g~~~~~Gipg~~v~~~L~e~gI~~E~~d~~--~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 496 PGMKKDGTMSDFGIPASIVAKYLDEHGIVVEKTGPY--NLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred CCCCCCccccccCCCHHHHHHHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 110000 00012334455568899998754321 112444555899999999999987643
No 362
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.6e-14 Score=128.19 Aligned_cols=341 Identities=17% Similarity=0.172 Sum_probs=219.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-C-----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-F-----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~-----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|.+++||+..+ +.++...+.+++.....+++.. . ..|+...-+-.+++.||++++ .++.|+.
T Consensus 92 ~G~~~~N~aS~N---fL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G-------~E~aivY- 160 (467)
T KOG1358|consen 92 DGKDVLNFASAN---FLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMG-------TEDAIVY- 160 (467)
T ss_pred cCceeecccchh---hhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhC-------Ccceeee-
Confidence 477888888776 4456778889988888887631 1 237766667899999999984 2445555
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------------c
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------------T 183 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------------~ 183 (421)
+-+-.++..++.++++.||.|.+.+-...+.....+...-.+.++.++ |+++++..+.+. +
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence 445667777888999999999999988888888888888788887654 556665544321 1
Q ss_pred eEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 184 VAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 184 ~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
+..++... --+||.+.| +.+|+++..+|...+|.||.++....+ |.+.......+..+-.++++|+.-+++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 33334444 456999955 788888888999999999999876654 344444444444444477888887766665
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhhhcccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKGYLNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
|+++++. .. -..+++......+ .+.++....++..++.. .++-.++.+.++.....+...|+...++.
T Consensus 311 ---gFc~G~~--~i----~~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 ---GFCAGKS--FI----ADHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred ---ceeecce--ee----EeeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence 7777732 00 1233343333322 23444555555555543 23333455666666667777777665666
Q ss_pred ccCCCCceeEEEEecCcccccCCCCh----HHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec--CCHHHHHHHH
Q 014631 340 CPRKPEGSMFVMVKLNLSLLEGISDD----MEFALQLAKEESVIVLPGMAV------GMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
+...+. +....+.+..... ..++. .+++...+.+ |+.+...... -.+..+|||+. .++|+++++.
T Consensus 380 v~~~~~-SPi~hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~ 456 (467)
T KOG1358|consen 380 VSGSPE-SPIIHLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAA 456 (467)
T ss_pred EecCcC-Cceeeeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHH
Confidence 333333 4455555654321 01122 2344444444 7777654332 22568999997 7899999999
Q ss_pred HHHHHHHHHh
Q 014631 408 GRIKAFCQRH 417 (421)
Q Consensus 408 ~~l~~~~~~~ 417 (421)
+.|+++..+.
T Consensus 457 ~~ik~~~~~~ 466 (467)
T KOG1358|consen 457 ELIKEVASAV 466 (467)
T ss_pred HHHHHHHHhh
Confidence 9999987653
No 363
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.65 E-value=7.7e-15 Score=136.40 Aligned_cols=252 Identities=18% Similarity=0.194 Sum_probs=156.2
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|++++||..|.-+... -..+|.+.+++.+++...... .......+....+++.+.+..+ -..++++++++|++
T Consensus 13 ~dG~~~lD~~~~~~~~~l-Gh~~p~i~~ai~~~~~~~~~~--~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse 87 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVNL-GHNHPEIAEAIAEQANKLNYV--SFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE 87 (339)
T ss_dssp TTSEEEEESSHHHHTTTT--BT-HHHHHHHHHHHHHCSSC--STTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCCCccceec-CCCccccchhHHHHhhhcccc--cccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence 358899999877533222 246789999999998874321 1122234556666666666553 24578999999999
Q ss_pred HHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCC---ccCCHHHHH
Q 014631 121 AIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKG---WEVDLDGLE 176 (421)
Q Consensus 121 al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~~d~e~l~ 176 (421)
|++.+++... .++ .+|+....+|++....+...+. .+..+|.+.... ..-..+.++
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 167 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE 167 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence 9999998765 233 6899999999986543332211 123333321000 000011122
Q ss_pred h---hhccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcc
Q 014631 177 A---LADENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS 251 (421)
Q Consensus 177 ~---~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 251 (421)
+ ....+..+.++..| +...|.. ++++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++ +
T Consensus 168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDiv---~ 243 (339)
T PF00202_consen 168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDIV---T 243 (339)
T ss_dssp HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSEE---E
T ss_pred HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCccc---c
Confidence 2 22233345566666 4445654 577889999999999999999999999998887643 333344333344 4
Q ss_pred cccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc
Q 014631 252 MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK 310 (421)
Q Consensus 252 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~ 310 (421)
++|.++ .|+++|.++++ +++.+.+..... .+...+++.+.++.+.|+...
T Consensus 244 ~gK~l~-gG~p~sav~~~--------~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~ 294 (339)
T PF00202_consen 244 FGKGLG-GGLPISAVLGS--------EEIMEAFQPGSHGSTFGGNPLSCAAALATLEILE 294 (339)
T ss_dssp EEGGGG-TTSSEEEEEEE--------HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHH
T ss_pred cccchh-hhhhccccccc--------chhhccccccccccccccchHhhhhhhhHHHhhc
Confidence 579964 56999999996 356665544332 345678899999888887633
No 364
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.63 E-value=4.8e-13 Score=132.10 Aligned_cols=302 Identities=13% Similarity=0.089 Sum_probs=175.6
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
+.+.++..|+.++ .....++++|+|.++..++.+++.+||+|+++..+|-+..+++.+.|+.+++++... +.
T Consensus 197 i~eAe~~aA~~fg-------Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~P~~-n~ 268 (713)
T PRK15399 197 HLEAEEYIARTFG-------AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLKPTR-NA 268 (713)
T ss_pred HHHHHHHHHHHhC-------CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEecccc-cc
Confidence 4577777788763 244678899999999999999999999999999999999999999999999986433 23
Q ss_pred cc----CCH-----HHHHhhhccC-----ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE-EEcccccccc-cCC
Q 014631 168 WE----VDL-----DGLEALADEN-----TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV-ISDEVYDHLT-FGS 231 (421)
Q Consensus 168 ~~----~d~-----e~l~~~~~~~-----~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~~~-~~~ 231 (421)
++ ++. +.+++.+.+. ++++++++|+. -|++++ +++|.++| |+.+ ++||||+.+. |..
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhgah~~F~p 341 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVPYTHFHP 341 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchhhhhcCc
Confidence 33 445 8888877532 25788999976 899965 56666666 5655 6999998754 322
Q ss_pred CCccccccc----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhh
Q 014631 232 TPYVRMGVF----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFK 307 (421)
Q Consensus 232 ~~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 307 (421)
.+.+...+ ..+..++++.|.||. ++++.-+.++.-... .+...+.+.+.-. .+++|+.+..+.+..+..
T Consensus 342 -~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk~~--vd~~~~n~a~~m~--~STSPsY~LmASLD~a~~ 414 (713)
T PRK15399 342 -IYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIKGE--YDEETFNEAFMMH--TSTSPSYPIVASVETAAA 414 (713)
T ss_pred -ccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeecCC--CCHHHHHHHHHHH--cCCCcHHHHHHHHHHHHH
Confidence 12212222 123234568899999 466654444332221 2222333333322 234666666555544332
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCC-----------------------------ceeEEEE
Q 014631 308 NTKEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPE-----------------------------GSMFVMV 352 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~-----------------------------~~~~~~~ 352 (421)
......-++..+...+....+++.+.++.+ +.++ .|+ +..=+++
T Consensus 415 ~m~~~~G~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~-~~~~~~~~~~w~l~p~~~whgf~~~~~~~~~lDP~KltI 493 (713)
T PRK15399 415 MLRGNPGKRLINRSVERALHFRKEVQRLREESDGWFFDIW-QPENVDEAECWPVAPGEQWHGFKDADADHMFLDPVKVTI 493 (713)
T ss_pred HHHhhhhHHHHHHHHHHHHHHHHHHHhccccccCceeeec-CccccCCccceecCCCcccccccccccccccCCCceEEE
Confidence 111111223333334444444555544322 2322 110 0001112
Q ss_pred ecCccc----c-cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 353 KLNLSL----L-EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 353 ~~~~~~----~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
..+... . ..+.... .+.+.|+++||.+.-...+ .--+-++++.++++++.+++.|.++-+
T Consensus 494 ~t~g~~~~g~~~~~Gi~g~-~l~~~L~e~gI~~E~~d~~--~vL~l~s~g~t~~~~~~L~~aL~~f~~ 558 (713)
T PRK15399 494 LTPGMDEQGNMSEEGIPAA-LVAKFLDERGIVVEKTGPY--NLLFLFSIGIDKTKAMGLLRGLTEFKR 558 (713)
T ss_pred EecCcccccccccCCCCHH-HHHHHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 221100 0 0011233 4445568899998754321 112444555899999999999987744
No 365
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.62 E-value=4.6e-16 Score=139.95 Aligned_cols=190 Identities=17% Similarity=0.193 Sum_probs=133.1
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKP 141 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p 141 (421)
+++.+.+++.+.... .- .|+......++++.++++++ .+..+++++||.++.++++++++|++.|++.++
T Consensus 7 ~~~~m~~a~~~a~~g-d~-~Yg~D~~~~~l~~~i~~l~g--------~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANVG-DD-AYGEDPTTARLEERIAELFG--------KEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTSB--C-CTTSSHHHHHHHHHHHHHHT--------SSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHccccC-Cc-ccCCChhHHHHHHHHHHHcC--------CCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 457888888554433 32 69888888999999999984 346678999999999999999999999999999
Q ss_pred CCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCC-cccccCHHHHHHHHHHH
Q 014631 142 GFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNP-CGNVFTYQQLQKIAEKA 211 (421)
Q Consensus 142 ~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~np-tG~~~~~~~l~~i~~~~ 211 (421)
+|... .......|.+++.++.. ++..+++++|++.+.. +++.|.+++|+|. .|+++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 88532 33346688888888743 3256999999998754 4678899999885 48999999999999999
Q ss_pred HhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 212 RKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 212 ~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
++||+.++.|.+--.-.. .+. ++..+-..-. ++..|++|.+++++ |.+++-+
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~---~~~e~~~~~D-~v~~~~tK~~g~~~---Gavl~~~ 208 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGV---SLAEIAAGAD-SVSFGGTKNGGAPG---GAVLAGN 208 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHH---HHHHHHTTSS-EEEEETTSTT-SSS---EEEEEES
T ss_pred HhCceEEEEehhhHHHhhhcccc---cHHHHhhhCC-EEEEEEEccccccc---ceEEEec
Confidence 999999999988532111 011 1122212122 44447999877765 5555543
No 366
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.62 E-value=1.1e-12 Score=134.69 Aligned_cols=299 Identities=15% Similarity=0.155 Sum_probs=189.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-c
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-A 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~ 130 (421)
..|+.+.+++.+.... ...|+|.+ | +-+++..+++++ +++++++.++.++|++.+.++.++ .
T Consensus 116 ~~P~~v~~~i~~~~~~--~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~ 187 (993)
T PLN02414 116 HVPPVILRNILENPGW--YTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNI 187 (993)
T ss_pred cCCHHHHHHHHhChHH--HhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhc
Confidence 4667776777665432 13444433 3 456777778877 578999999999999999988766 3
Q ss_pred CCC--CeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631 131 RPG--ANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 131 ~~g--d~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 204 (421)
++| |+|++++..|+.+...+ +..|++++.++.... + ...+....+++..|+ .+|.+ .++
T Consensus 188 ~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v---~dv 252 (993)
T PLN02414 188 LKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEV---LDY 252 (993)
T ss_pred ccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEE---cCH
Confidence 444 78999999999876555 446888888875321 1 111223344444444 49999 569
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC---CCCceEEEEEeeCCCcchhHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI---VPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~---~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++|+++|+++|+++++ .++.... .+ ..+...++.+ |++++.+|+.+ ..|.+.|++++++. +.
T Consensus 253 ~~I~~~ah~~GaL~iV-aad~lal-~~--l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~ 317 (993)
T PLN02414 253 AEFVKNAHANGVKVVM-ATDLLAL-TM--LKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YK 317 (993)
T ss_pred HHHHHHHHHcCCEEEE-EECHHHh-cC--CCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HH
Confidence 9999999999999999 4443311 11 1123444444 88899999941 23455899999642 22
Q ss_pred HHHhh-------------------------hcccccCCchHHHHHHHHHhh-----ccchhHHHHHHHHHHHHHHHHHHH
Q 014631 282 DSIKG-------------------------YLNISSGPATFVQGAVPQIFK-----NTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 282 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
+.+-. .+.-..+.|.....++.+.+. .....++++++++...+..++.+.
T Consensus 318 r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~ 397 (993)
T PLN02414 318 RLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAG 397 (993)
T ss_pred hhCCCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHH
Confidence 21110 000012344433333333332 123467888899999999999999
Q ss_pred hhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631 332 IKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
|.+. |+.+. .+ .+|-.+.+... ++.++..+| .++||.+.... .+.+|+|++ ++++||+.+++.
T Consensus 398 L~~~-G~~~~-~~--~~f~~vt~~~~------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~ 462 (993)
T PLN02414 398 LKKL-GFQVQ-SL--PFFDTVKVKCS------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKV 462 (993)
T ss_pred Hhhc-CCccC-CC--CCcCeEEEecC------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHH
Confidence 9875 77743 33 23333333321 355666665 66799776432 457999998 899999999999
Q ss_pred HHH
Q 014631 410 IKA 412 (421)
Q Consensus 410 l~~ 412 (421)
|..
T Consensus 463 l~~ 465 (993)
T PLN02414 463 FAG 465 (993)
T ss_pred Hcc
Confidence 963
No 367
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.61 E-value=1.3e-12 Score=134.61 Aligned_cols=271 Identities=14% Similarity=0.151 Sum_probs=178.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CC--CCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RP--GANILLPKPGFPLYEAN----ARHTRLEIRHF 160 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~--gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~ 160 (421)
+-+++..+++++ ++++.++.+..++|++.+.++.++. ++ +|+|++++..|+.+... ++..|++++.+
T Consensus 123 l~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~ 196 (954)
T PRK05367 123 LLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG 196 (954)
T ss_pred HHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence 345566677766 5788999999999999998887762 44 48999999999887654 45679999888
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+... |.+ .+++.++++..| |.+|.+ +++++|+++|+++|+++++|..+..+.. ..+...+
T Consensus 197 ~~~~------d~~------~~~~~~vlvq~p-~~~G~i---~d~~~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~ 256 (954)
T PRK05367 197 DAAK------ALD------HDDVFGVLLQYP-GTSGEV---RDYTALIAAAHARGALVAVAADLLALTL----LTPPGEM 256 (954)
T ss_pred cCcc------CCC------cccEEEEEEecC-CCCeee---ccHHHHHHHHHHcCCEEEEEehhhhccC----CCChhhc
Confidence 7532 111 224444555565 569999 5699999999999999999985533221 1123445
Q ss_pred CCCCCEEEEcccccc-----cCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------------------------ccc
Q 014631 241 GSTVPVITLGSMSKR-----WIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------------------------LNI 290 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~ 290 (421)
+.+ |+++|.+|+ ||.|| .|++++++ ++.+.+... +.-
T Consensus 257 GaD---i~vgs~qkfg~P~g~GGP~--aGflavr~--------~~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRre 323 (954)
T PRK05367 257 GAD---IAVGSAQRFGVPMGFGGPH--AAYFAVRD--------AYKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRRE 323 (954)
T ss_pred CCC---EEEeeCcccCCCCCCCCCC--EEEEEECH--------HHHhhCCCCeeeeecccCCCccccccccccccccccc
Confidence 544 888999998 66665 89998863 233332100 000
Q ss_pred ccCCchHHHHHHHHH-----hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCCh
Q 014631 291 SSGPATFVQGAVPQI-----FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDD 365 (421)
Q Consensus 291 ~~~~~~~~~~~~~~~-----l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (421)
..+.|.....++.+. +......+++++.++...+..++.+.|+. +|+.+. .+ .+|-.+.+... .+.
T Consensus 324 kaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~-~~--~~f~~~~~~~~-----~~~ 394 (954)
T PRK05367 324 KATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVV-HD--SFFDTLTVEVG-----GDA 394 (954)
T ss_pred ccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccC-CC--CCCCeEEEeCC-----CCH
Confidence 112222222222111 22234578889999999999999999987 487733 22 23333333321 145
Q ss_pred HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631 366 MEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 366 ~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
.++..++ .++||.+..- ..+.+|+|+. ++++||+.+++.|.
T Consensus 395 ~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 395 AAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLAVFG 437 (954)
T ss_pred HHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHHHHc
Confidence 6676665 6679988321 1467999998 78999999999996
No 368
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.60 E-value=2.2e-12 Score=112.18 Aligned_cols=350 Identities=11% Similarity=0.063 Sum_probs=216.7
Q ss_pred hhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCC-CCCCCCCH-HHHHHHHHHH
Q 014631 25 LTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDC-YSPSVGIL-PARRAIADYL 99 (421)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~-y~~~~g~~-~l~~~ia~~l 99 (421)
.++.+...+|. ...++|.|+.++-...+. ....+.+++..+.+..+ .++. -.+...++ .+-..+|-++
T Consensus 17 dpl~~lr~~f~------lp~~viyLdgnSLGa~p~-~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLi 89 (407)
T COG3844 17 DPLAKLRDRFA------LPGGVIYLDGNSLGARPR-AVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLI 89 (407)
T ss_pred CchhhhHhhcc------CCCCeEEeeccccccCch-HHHHHHHHHHHHHHHhhhhhhhcccCCchhhchhHHHHHhhhhh
Confidence 44555555543 377899998776331100 01222233333333221 1211 11222222 4445555555
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcch-----HHHHhhcCceeEeeeccCCCCccCCH
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGANILLPKPGFPLY-----EANARHTRLEIRHFDLLPEKGWEVDL 172 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~ 172 (421)
+..+.+++++.+++-.++.++.+.+ ++|++|++++-.-.+. ...+...+.. ..+ ...+.+
T Consensus 90 ------GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~-~~~------~~~~~P 156 (407)
T COG3844 90 ------GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG-YDL------EGVIAP 156 (407)
T ss_pred ------cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc-ccc------eeeeCh
Confidence 4678999999999999998887764 4688888876433322 3334444433 111 123567
Q ss_pred HHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631 173 DGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252 (421)
Q Consensus 173 e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 252 (421)
+++++.+.+++.++++++.+.-||..+ ++.+|.++++++|++++.|=+|+. |.-...++..+.+ +-|++.
T Consensus 157 ~~~~~~~~dd~AvV~L~~V~y~TGql~---dm~aiT~~AH~~galv~wDLAHsa----Gavp~~Lh~~gaD---faigcs 226 (407)
T COG3844 157 RALEEAITDDVAVVLLSHVNYKTGQLL---DMRAITALAHQHGALVGWDLAHSA----GAVPVDLHAAGAD---FAIGCS 226 (407)
T ss_pred HHHHHhhccceEEEEecccccccccee---eHHHHHHHHHhcCceEEeehhccc----CCcceeecccCCC---eeeeee
Confidence 799999999999999999999999994 589999999999999999999987 4334455555544 778888
Q ss_pred ccccCC-CCceEEEEEeeCCCcchhHHHH------------HHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHH
Q 014631 253 SKRWIV-PGWRLGWLVTSDPSGILQELRI------------VDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 253 sK~~~~-~G~r~G~~~~~~~~~~~~~~~~------------~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
.|.+.. ||-. +++++.+.......+.+ .+.+.... ...++++..+..++..+|+......+.
T Consensus 227 yKYLNgGPGap-a~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~ 305 (407)
T COG3844 227 YKYLNGGPGAP-AGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDIT 305 (407)
T ss_pred ceeccCCCCCc-eeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHH
Confidence 898764 5544 44444322110000111 11111110 112345556666666667654555688
Q ss_pred HHHHHHHHHHHHHHHHhhcC-C--CccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 316 KIVDILRDTADICYDRIKEI-P--CITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
+.+++--.+.+++.+.++.. + ++. +..|. .|..+.+..+ +..++... |.++||+. .|..
T Consensus 306 ~lR~kSlaLTd~fieLvEa~~~~~~l~-l~tPr~~~~rGsqvS~~hp--------~~~~V~qa-Li~rGVig----D~R~ 371 (407)
T COG3844 306 ELRKKSLALTDYFIELVEARCEYYGLT-LVTPRAHEERGSQVSLYHP--------HGYQVMQA-LIDRGVIG----DFRE 371 (407)
T ss_pred HHHHhhhHHHHHHHHHHHhccccCCcE-EeccchhhhccceeeEecC--------cHHHHHHH-HHHcCccc----cccC
Confidence 88888888899999888853 3 344 22443 2445555555 35566555 47789975 2455
Q ss_pred CCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631 389 KNWLRITFA---IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 389 ~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++.+|+.++ ++-+|+-.+++.|.+++++..-
T Consensus 372 P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a~ 405 (407)
T COG3844 372 PDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLAW 405 (407)
T ss_pred CCeeeecCccceechhHHHHHHHHHHHHHHhhcc
Confidence 789999998 6889999999999999987643
No 369
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.58 E-value=3.7e-12 Score=117.93 Aligned_cols=340 Identities=17% Similarity=0.157 Sum_probs=209.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.-+|||-+..-+. .+.+...++|.. ++ ..|+.++.+.+|++.++++++ .+.++.|+.++.+-
T Consensus 40 ~dV~IDLrSDTgT~----apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~G--------~E~alpthqGRgaE 102 (467)
T TIGR02617 40 EDVFIDLLTDSGTG----AVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAE 102 (467)
T ss_pred CCeEEECccCCCCC----CCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHhC--------CceEEECCCCchHH
Confidence 44557775554321 244666676664 32 368877778999999999984 35688899999999
Q ss_pred HHHHHHhcC-CCCeEEEcCC-------CCcc-hHHHHhhcCceeEeeecc--------CCCCccCCHHHHHhhhcc----
Q 014631 123 QVILTVLAR-PGANILLPKP-------GFPL-YEANARHTRLEIRHFDLL--------PEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 123 ~~~~~~l~~-~gd~Vl~~~p-------~y~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~d~e~l~~~~~~---- 181 (421)
.++++.+++ ||+.+.+..+ .|.. ....+...|+.++.++.+ ...+..+|++++++.+++
T Consensus 103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 999999887 7887775443 2222 345677888887765422 112356899999999874
Q ss_pred CceEEEEeCCCC-CcccccCHHHHHHHHHHHHhcCcEEEEccccccc----------ccCCCCccccc-cc-CCCCCEEE
Q 014631 182 NTVAMVIVNPGN-PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL----------TFGSTPYVRMG-VF-GSTVPVIT 248 (421)
Q Consensus 182 ~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~----------~~~~~~~~~~~-~~-~~~~~~i~ 248 (421)
+...+...-.+| -.|.++|.+.++++.++|++||+.++.|.+--.- .+.+.....+. .+ ...| .+
T Consensus 183 ~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aD--sv 260 (467)
T TIGR02617 183 NVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYAD--ML 260 (467)
T ss_pred CceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCC--EE
Confidence 222221111134 4689999999999999999999999999864321 12233222221 10 1111 34
Q ss_pred EcccccccCCC-CceEEEEEeeCCCcchhHHHHHHHHhhhcc------cccCCchHHHHHHHHHhhcc-chhHHHHHHHH
Q 014631 249 LGSMSKRWIVP-GWRLGWLVTSDPSGILQELRIVDSIKGYLN------ISSGPATFVQGAVPQIFKNT-KEDFFSKIVDI 320 (421)
Q Consensus 249 ~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 320 (421)
..|+||.++.| | |+++++++. ++ ++.++++.... .+++.+.-...+++..|.+. .++++..+..+
T Consensus 261 t~slsKglgApvG---g~Lag~d~~-~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~q 333 (467)
T TIGR02617 261 AMSAKKDAMVPMG---GLLCFKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRINQ 333 (467)
T ss_pred EEEcCCCCCCccc---ceEEecchh-HH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHHH
Confidence 55899998776 4 666665421 10 35555554332 12344444455555455442 24555555544
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc----ccccCCCChHHHHHHHHhhcCeeEE-eCCCC-CC------
Q 014631 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL----SLLEGISDDMEFALQLAKEESVIVL-PGMAV-GM------ 388 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~------ 388 (421)
.+++.+.|.+. |+.++ . .||.-++++... ..... .....++.+|-.+.||--. -|+.. +.
T Consensus 334 ----v~yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~~~-fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~ 405 (467)
T TIGR02617 334 ----VQYLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPADQ-FPAHALACELYKVAGIRAVEIGSLLLGRDPKTGK 405 (467)
T ss_pred ----HHHHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCChhh-CcHHHHHHHHHHHcCcceEeecceecccCCCCCc
Confidence 44556666655 88744 5 667666664221 11111 1366788888888888532 23321 11
Q ss_pred -----CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631 389 -----KNWLRITFA---IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 389 -----~~~iRi~~~---~~~e~l~~~~~~l~~~~~~ 416 (421)
-.-+|+++. .|.+.++.+.++|..+.++
T Consensus 406 ~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred cCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 156999998 6889999999999888654
No 370
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.55 E-value=5.5e-12 Score=114.95 Aligned_cols=312 Identities=16% Similarity=0.158 Sum_probs=203.0
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh----cC-CC---CeEEEcCCCCcchHHHHhhcCcee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL----AR-PG---ANILLPKPGFPLYEANARHTRLEI 157 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~~-~g---d~Vl~~~p~y~~~~~~~~~~g~~~ 157 (421)
++..++..++..++...++.+ ...-=..|.|+++++....+.. .+ +| ..++++...+..+..+++..+.++
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 456788999999888877745 2223356788999955555432 12 23 478888889999999999999999
Q ss_pred EeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh-cCcEEEEcccccccccC-CCCcc
Q 014631 158 RHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFG-STPYV 235 (421)
Q Consensus 158 ~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~ 235 (421)
..+++++ ..+.+|+..+.+.+++++..++.+.|+.|+|.. +++++|.++..+ +++.+.+|.+-++|... +..
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~---e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~-- 268 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEI---EDVEKLADLLLEIWDIPIHVDACLGGFINPAGYL-- 268 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccch---hhHHHHHHHHHHHhCCceeecccCcccccccccc--
Confidence 9999875 678899999999999999999999999999999 999999999999 99999999999988742 111
Q ss_pred cccccCCCC-CEEEE-cccccccCCCCceEEEEEeeCCCcchhHHHH---HHHHhhhc-ccc---cCCchHHHHHHHHHh
Q 014631 236 RMGVFGSTV-PVITL-GSMSKRWIVPGWRLGWLVTSDPSGILQELRI---VDSIKGYL-NIS---SGPATFVQGAVPQIF 306 (421)
Q Consensus 236 ~~~~~~~~~-~~i~~-~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~---~~~~~~~~-~~~---~~~~~~~~~~~~~~l 306 (421)
....++-.. .+-.+ .+-||- |+.--..||++-++.+.+. .++ .+.+.... ..+ +-+.....++-++.+
T Consensus 269 ~~~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~--~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~ 345 (491)
T KOG1383|consen 269 NEEEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLP--HQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALM 345 (491)
T ss_pred CccccccCCCCceeEeecccee-eeeecCcEEEEEccccccc--ceEEEeccccCccccCcccccCCcccHHHHHHHHHH
Confidence 111222111 12112 245676 6544447998887543111 000 00011000 111 112222222222344
Q ss_pred hccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC
Q 014631 307 KNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
+ ..++++.+..+.+.+....+++.+++++++.++..|.-++.. +.... .+.-.+..+++++|..+..-.
T Consensus 346 ~-lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~---~~s~~-----~~i~elsd~l~~~GW~lnalq-- 414 (491)
T KOG1383|consen 346 S-LGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFIL---FGSND-----VNIFELSDLLRKKGWILNALQ-- 414 (491)
T ss_pred H-hhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEE---ccCCc-----cchhhhhHHHHhcCcCccccC--
Confidence 4 345677777888889999999999999888855444433222 33221 122234456688898875432
Q ss_pred CCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631 387 GMKNWLRITFA---IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 387 ~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+..+-+|+. ..++-.++++..|+++++++.+
T Consensus 415 -~P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 415 -FPAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred -CCCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 2345666664 3445578889999999888653
No 371
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.53 E-value=1.3e-12 Score=112.12 Aligned_cols=333 Identities=11% Similarity=0.102 Sum_probs=201.7
Q ss_pred CCcHHHHHHHHHHHhcCCCC-CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--CCCeEE
Q 014631 61 RTTPVAADAVVDAVRSAEFD-CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--PGANIL 137 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~-~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--~gd~Vl 137 (421)
..+|.+.+|...++...+.+ ++-. .+|-+-...+... . ..-+-++|+++|++|+.++++...+ +-..|+
T Consensus 61 hchp~VV~A~~kQmat~~tN~RFlh----d~lv~cA~~l~st-l---PeLsvc~F~NSGSEANDLALRLAR~ftkhqDvI 132 (452)
T KOG1403|consen 61 HCHPEVVRAGAKQMATISTNNRFLH----DELVQCARTLTST-L---PELSVCFFVNSGSEANDLALRLARNFTKHQDVI 132 (452)
T ss_pred cCCHHHHHHHHHHHhHhcccchhhH----HHHHHHHHHHhhc-C---CCceEEEEecCCchhhHHHHHHHHhhcccCceE
Confidence 67899999998888764322 2211 2443333333321 1 1235678999999999999987532 223455
Q ss_pred EcCCCCcchHHHHh-h------cC---ceeEeeeccCCCC----------------ccCCHHHHHhhhc----cCce-EE
Q 014631 138 LPKPGFPLYEANAR-H------TR---LEIRHFDLLPEKG----------------WEVDLDGLEALAD----ENTV-AM 186 (421)
Q Consensus 138 ~~~p~y~~~~~~~~-~------~g---~~~~~~~~~~~~~----------------~~~d~e~l~~~~~----~~~~-~i 186 (421)
+.+..|++...... . .| .++.++.+-|..+ ...-.+.+++.+. .+.. +.
T Consensus 133 tldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAA 212 (452)
T KOG1403|consen 133 TLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAA 212 (452)
T ss_pred EEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHH
Confidence 66667766432221 0 11 1223332221100 0112334444432 2222 22
Q ss_pred EEeCC-CCCcccccCH-HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631 187 VIVNP-GNPCGNVFTY-QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264 (421)
Q Consensus 187 ~~~~p-~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 264 (421)
++... +.=.|.++|+ ...+++++..+.+|-+.|.||++.+|.+-|..++.+..++--..++ ++.|. +..|.+++
T Consensus 213 fiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~hyWafq~y~fiPDIV---tmgKp-mGNGhPVa 288 (452)
T KOG1403|consen 213 FIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGSHYWAFQTYNFIPDIV---TMGKP-MGNGHPVA 288 (452)
T ss_pred HHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccchhhhhhhhhccccchh---eeccc-CCCCCeee
Confidence 33333 5556776655 6689999999999999999999999998899888887766433333 67799 67999999
Q ss_pred EEEeeCCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh-cCCCccc
Q 014631 265 WLVTSDPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK-EIPCITC 340 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~g~~~ 340 (421)
.++.. +++.+.+..... .+.+.|+.++++..+.|+....+.+.+..++..+..+.+...++ +++.+..
T Consensus 289 ~Vatt--------keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD 360 (452)
T KOG1403|consen 289 AVATT--------KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDENLQEHAQQVGEKLEVLLRRLKQKHECIGD 360 (452)
T ss_pred EEecc--------HHHHHHhccccceehhccCCCchhHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhccceec
Confidence 99985 578888876431 24578999999999998865555666666666655555555555 3333432
Q ss_pred cCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 341 PRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
+ ..-|.|..+++-+... +....+...+.++-+.++|++..-.. .++.+.|-+. .++++.++.+..|.+++.
T Consensus 361 v--RGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP--h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 361 V--RGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP--HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred c--ccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC--CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 2 2336777776643221 11122345566666667888865221 1456666554 788888888888888775
Q ss_pred Hh
Q 014631 416 RH 417 (421)
Q Consensus 416 ~~ 417 (421)
-+
T Consensus 437 ~m 438 (452)
T KOG1403|consen 437 VM 438 (452)
T ss_pred HH
Confidence 44
No 372
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.52 E-value=7.6e-11 Score=115.75 Aligned_cols=257 Identities=15% Similarity=0.118 Sum_probs=161.6
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----C-----
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----P----- 132 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~----- 132 (421)
.++.+...+...+-+.+...|..+++...+++.+.+|+.+.+|.+. ..=.+|+|||+|+...+....+ |
T Consensus 95 ~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~ 172 (608)
T TIGR03811 95 LMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKE 172 (608)
T ss_pred CHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhh
Confidence 3444443333333343444565566778999999999999988653 3455788888887754433211 0
Q ss_pred -------------------------------------------C------CeEEEcCCCCcchHHHHhhcCce---eEee
Q 014631 133 -------------------------------------------G------ANILLPKPGFPLYEANARHTRLE---IRHF 160 (421)
Q Consensus 133 -------------------------------------------g------d~Vl~~~p~y~~~~~~~~~~g~~---~~~~ 160 (421)
| -.++++...|+++..++...|.. ++.+
T Consensus 173 ~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~V 252 (608)
T TIGR03811 173 VKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPV 252 (608)
T ss_pred ccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEe
Confidence 0 05888888899999999999985 7788
Q ss_pred eccCCCCccCCHHHHHhhhcc----C--ceEEEEeCCCCCcccccCHHHHHHHHHHH---HhcCc--EEEEcccccccc-
Q 014631 161 DLLPEKGWEVDLDGLEALADE----N--TVAMVIVNPGNPCGNVFTYQQLQKIAEKA---RKLGI--MVISDEVYDHLT- 228 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~----~--~~~i~~~~p~nptG~~~~~~~l~~i~~~~---~~~~~--~li~De~~~~~~- 228 (421)
|++ +++.+|+++|++.+.+ + +-+|+-+.++..+|.+ +++++|+++| +++|+ ++++|.||+++.
T Consensus 253 pvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~Gai---Dpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~ 327 (608)
T TIGR03811 253 PVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAV---DGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGR 327 (608)
T ss_pred ecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCccc---CCHHHHHHHHHHHHHcCCceeEeeeccccchhh
Confidence 875 4567999999887743 2 2335566778889999 7777777777 77887 699999999853
Q ss_pred --cCCC--Ccc----------------------------cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631 229 --FGST--PYV----------------------------RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 229 --~~~~--~~~----------------------------~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 276 (421)
+... .+. .+..+..-+ -| .-.+||+ +.....+|.++++++.
T Consensus 328 ~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~AD-SI-tvDpHK~-g~~Py~~G~ll~Rd~~---- 400 (608)
T TIGR03811 328 AIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAE-SV-TIDPHKM-GYIPYSAGGIVIQDIR---- 400 (608)
T ss_pred hhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCce-EE-EeCcccc-cccCCCeEEEEEeCHH----
Confidence 1110 000 011111111 13 3379999 5666789999998642
Q ss_pred HHHHHHHHhhhcc---------------cccCCchHH--HHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 277 ELRIVDSIKGYLN---------------ISSGPATFV--QGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 277 ~~~~~~~~~~~~~---------------~~~~~~~~~--~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+.+.+..... .....+.+. ..++..+++.. ...++.++..+..++++++.+.|.++
T Consensus 401 ---~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 401 ---MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred ---HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2222211100 001122222 23333334332 45788888899999999999999873
No 373
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.51 E-value=2.1e-11 Score=115.92 Aligned_cols=237 Identities=15% Similarity=0.115 Sum_probs=156.1
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
+.+..+..|+.++. ...-++++|++.++..++.+++.+||.|+++.++|-+.....-+.|+.++++....+..
T Consensus 72 i~eAqe~aA~~fgA-------d~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~ 144 (557)
T COG1982 72 IKEAQELAARVFGA-------DHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPL 144 (557)
T ss_pred HHHHHHHHHHHhCC-------CceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecCCCCcc
Confidence 56888888888742 44678899999999999999999999999999999999999999999999887544332
Q ss_pred ----ccCCHHHHHhhhcc--Cc-eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 168 ----WEVDLDGLEALADE--NT-VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 168 ----~~~d~e~l~~~~~~--~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
.+++.+.+++.+.+ .. +.+++++|+. .|+++. +++|++.+..+++++.+|+++....-..... +-...
T Consensus 145 ~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l-~~~~~ 219 (557)
T COG1982 145 YGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPML-PESAL 219 (557)
T ss_pred ccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccC-cchhh
Confidence 35799999886533 34 7788999987 789855 7788888889999999999997643111111 11111
Q ss_pred CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHH---hhccchhHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQI---FKNTKEDFFSKI 317 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~~ 317 (421)
....+++..|.||.+ .+....+++-+.+. ...+.+.+-+.+.... +++|+.+..+++..+ ........+.+.
T Consensus 220 -~~~~~~~tqS~HK~l-~alSQaS~iHv~~~-~~~~~~r~nea~~~h~--STSPsY~l~ASlD~Ar~~~~~~G~~l~~~~ 294 (557)
T COG1982 220 -NGGADFVTQSTHKLL-AALSQASMIHVKDG-RAVNHERFNEALMMHQ--STSPSYPLMASLDVARMQEGNAGRELWQEV 294 (557)
T ss_pred -hcCceEEEechhhhh-hhhhhhHHHhhCCC-ccCCHHHHHHHHHHHc--cCCchHHHHHHHHHHHHhhhhhhHHHHHHH
Confidence 133468889999993 33333444544432 1221223333333222 235555555444332 111123333444
Q ss_pred HHHHHHHHHHHHHHhhcCCCcccc
Q 014631 318 VDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
....-+.++.+++.+.+++++.++
T Consensus 295 ~~~~i~~r~~~~~~~~~~~~~~~~ 318 (557)
T COG1982 295 IDEAIDFRKALRRLINEIGFFPVL 318 (557)
T ss_pred HHHHHHHHHHHHHHHHhcCCeeec
Confidence 555566777777777777666644
No 374
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.50 E-value=2e-11 Score=107.78 Aligned_cols=336 Identities=13% Similarity=0.092 Sum_probs=212.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHHHHHHHHHhcCCC
Q 014631 61 RTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQAIQVILTVLARPG 133 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~al~~~~~~l~~~g 133 (421)
-....+.+|+-..+.+....+ |+..+-+.+++-...+...+-|+.+...-.|-+ .-+++.|+.++..++++|+
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph 130 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPH 130 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCC
Confidence 355788899988887643333 333444556665555555555553322222322 2345668888899999999
Q ss_pred CeEEEcC---CCCcc--hHHHHhhcCce-----eEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631 134 ANILLPK---PGFPL--YEANARHTRLE-----IRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 134 d~Vl~~~---p~y~~--~~~~~~~~g~~-----~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 202 (421)
++|+-.+ .+|-+ |..-.+...+. -.++.++++.+ -+|.|.||+.... ++++|+ +..+ -....+
T Consensus 131 ~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG-~IDYD~Le~~A~~frPk~ii-aG~S-aY~R~~--- 204 (477)
T KOG2467|consen 131 ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTG-YIDYDKLEKTATLFRPKLII-AGTS-AYSRLI--- 204 (477)
T ss_pred CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCC-ceehHHHHHHHHhcCCcEEE-eccc-cchhhc---
Confidence 9988654 34422 22111222222 22234555544 5899999885433 556554 3222 112222
Q ss_pred HHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh-----
Q 014631 203 QLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ----- 276 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----- 276 (421)
+..++.++|.+.|.+++.|.+| ++++..+.-+.++...+ |+..+.+|+ +.|.|.|.+.-+......+
T Consensus 205 DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFey~D-----iVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g~ 277 (477)
T KOG2467|consen 205 DYARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFEYCD-----IVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQGK 277 (477)
T ss_pred cHHHHHHHHHhcCceeehhhhhHHHHHhcccCCCcccccc-----eeecccccc--ccCCcceeEEEeccCCcCCCCCCC
Confidence 3566667777889999999999 45555555444544333 778899998 6888999988754211110
Q ss_pred --HHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631 277 --ELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352 (421)
Q Consensus 277 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 352 (421)
--++.+++..... .-++|......+++.+|.......+...+++..++...+.+.|.+. |..++....+...+.+
T Consensus 278 ~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLv 356 (477)
T KOG2467|consen 278 EILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLV 356 (477)
T ss_pred cceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEE
Confidence 0134555544432 2357777788888888887667788888999999999999999988 8886666666777777
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----CCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-----KNWLRITFA------IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~iRi~~~------~~~e~l~~~~~~l~~~~~ 415 (421)
++....+ +..-+++.|+..+|.+.--..++. ++.+|+.-. ..++|+++..+-|.++++
T Consensus 357 DLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 357 DLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred eccccCC-----chHHHHHHHHHhhhhhcCCcCCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 8876533 345567777777887755444443 688999754 346899998888887764
No 375
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.32 E-value=2e-09 Score=97.68 Aligned_cols=314 Identities=17% Similarity=0.167 Sum_probs=195.4
Q ss_pred CCCCCCC---CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC-HHHHH---HHHHHHhc-CCC----CeEEEcCCCCcch
Q 014631 79 FDCYSPS---VGILPARRAIADYLNSELPCKLSPDDVYLTAG-CKQAI---QVILTVLA-RPG----ANILLPKPGFPLY 146 (421)
Q Consensus 79 ~~~y~~~---~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g-~~~al---~~~~~~l~-~~g----d~Vl~~~p~y~~~ 146 (421)
.+-|.|. +|+.++-..+.+||.+-- .-+.|.+.+. |.++= .++++..- ..| +.+++++..|...
T Consensus 95 iHP~~pe~~vqG~l~li~~Lq~~L~~IT----G~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTN 170 (496)
T COG1003 95 IHPFQPEEQVQGYLELIYELQEWLKEIT----GMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTN 170 (496)
T ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHhc----CCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCC
Confidence 4455543 577888888888987633 3466766543 22222 22333331 222 6899999999988
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-..+...|.+++.|+.+.+ ..+|+|+|++.+.+++.++.+++|+. -|+. .+.+++|+++.+++|..+..|.+--.
T Consensus 171 PASAam~G~~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~GvF--E~~I~ei~~ivH~~Gg~vY~DGANlN 245 (496)
T COG1003 171 PASAAMAGFKVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LGVF--EEDIREICEIVHEAGGQVYYDGANLN 245 (496)
T ss_pred hhhHhhcCceEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cccc--hhhHHHHHHHHHHcCCEEEecCcchh
Confidence 8899999999999997644 45999999999999999999999985 5655 36799999999999999999988654
Q ss_pred cccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhh----------------
Q 014631 227 LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKG---------------- 286 (421)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~---------------- 286 (421)
...+-..+ ..++. . |+=..++|+|+.| |...|=|.+.. .+...+-.
T Consensus 246 A~vG~~rP---Gd~G~--D-V~HlNLHKTF~iPHGGGGPG~GPvgVk~--------~L~pfLP~p~~~~~~~~y~~~~~~ 311 (496)
T COG1003 246 AIVGLARP---GDMGF--D-VVHLNLHKTFCIPHGGGGPGAGPVGVKA--------HLAPFLPGPVVYHDVGEYRLDYDG 311 (496)
T ss_pred hhhccccc---ccccc--c-eEEeecccccccCCCCCCCCCCceehHh--------hccccCCCCcccCCCccccccCCC
Confidence 33221111 12222 2 3333688988754 44455555531 11111100
Q ss_pred hc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--eeEEEEecCccccc
Q 014631 287 YL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--SMFVMVKLNLSLLE 360 (421)
Q Consensus 287 ~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--~~~~~~~~~~~~~~ 360 (421)
.. ......|......+..++.....+++.+.-+..--+.+++..+|+.. +.+++.+.. ..=+.+........
T Consensus 312 ~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~ 389 (496)
T COG1003 312 KKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKE 389 (496)
T ss_pred CccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhh
Confidence 00 00011233333344445544445777777777778899999999863 443334442 11122223211111
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+-...++..+| ..+|+.- |-..|- ..+.+-|=+. -+++++|++++++.++.++.++
T Consensus 390 ~Gv~~~DvAKrL-lD~GfHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~~ 450 (496)
T COG1003 390 TGVRALDVAKRL-LDYGFHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEADA 450 (496)
T ss_pred cCCcHHHHHHHH-HhcCCCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 112466777776 4578865 444454 4677777776 5679999999999998877643
No 376
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.26 E-value=1.2e-08 Score=104.04 Aligned_cols=297 Identities=13% Similarity=0.153 Sum_probs=180.8
Q ss_pred CCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc
Q 014631 61 RTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~ 130 (421)
..|+.+.+.+.+ ++. +..|.|.+ | +-++...++++. +.+..+.-+..++|++-++++.+..
T Consensus 77 ~~p~~i~r~v~~---~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~ 147 (939)
T TIGR00461 77 ILPPVIQRNLLE---NPGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFN 147 (939)
T ss_pred cCChHHHHHHHh---CchhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHH
Confidence 356666644443 332 34555543 3 234555566665 4667788888898888887776642
Q ss_pred ---CCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 131 ---RPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 131 ---~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
+++++|++++..|+.+...++ ..|.+++.+ |++++++.+ ++.++++.+|+. .|.+ ++
T Consensus 148 ~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~----------~~~~l~~~~--~~~~v~~q~Pn~-~G~i---ed 211 (939)
T TIGR00461 148 VSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV----------DCSDIKKAV--DVFGCLLQYPAT-DGSI---LD 211 (939)
T ss_pred hhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE----------cHHHHhhcC--CEEEEEEECCCC-CeEE---ec
Confidence 234899999999988765544 667777765 344565554 466777778875 8999 68
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCC----CCceEEEEEeeCCCcchhHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIV----PGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+++|.++++++|.+++++.-...+. ...+...++.+ |++++ +|.||. +|.-.|++.+++ +
T Consensus 212 ~~~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~--------~ 275 (939)
T TIGR00461 212 YKQLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGS-SQRFGVPMGYGGPHAAFFAVKD--------E 275 (939)
T ss_pred HHHHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeC-CCccCCCCCCCCCceeeeeecH--------h
Confidence 9999999999999999854332221 11122333333 55553 344454 233467777643 1
Q ss_pred HHHHHh-------------------------hhcccccCCchHHHH-----HHHHHhhccchhHHHHHHHHHHHHHHHHH
Q 014631 280 IVDSIK-------------------------GYLNISSGPATFVQG-----AVPQIFKNTKEDFFSKIVDILRDTADICY 329 (421)
Q Consensus 280 ~~~~~~-------------------------~~~~~~~~~~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 329 (421)
+.+.+- ..+..-.++|..... ++..++......++.++.++...+..++.
T Consensus 276 l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~ 355 (939)
T TIGR00461 276 YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILA 355 (939)
T ss_pred hHhhCCCCceeEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 222210 000000122222111 12222333456889999999999999999
Q ss_pred HHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 330 DRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 330 ~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
+.|++. |+++. .+ .+|-.+.+.... .+..++...+ .++||.+... ..+.+++|+. ++++||+.++
T Consensus 356 ~~L~~~-G~~~~-~~--~fF~~~~v~~~~----~~~~~i~~~~-~~~gi~l~~~----~~~~i~~s~~E~~t~~di~~l~ 422 (939)
T TIGR00461 356 NGLEND-PHELI-NK--TWFDTLTVKVGN----GISSELLKAA-EEFNINLRAV----DTTTVGIALDETTTKADVENLL 422 (939)
T ss_pred HHHHhC-CCccc-CC--CccceEEEEeCC----CCHHHHHHHH-HHCCCeeeec----CCCEEEEEeecCCCHHHHHHHH
Confidence 999984 88843 33 445444443210 1355666555 6679997652 2368999998 8999999999
Q ss_pred HHHH
Q 014631 408 GRIK 411 (421)
Q Consensus 408 ~~l~ 411 (421)
+.+.
T Consensus 423 ~~~~ 426 (939)
T TIGR00461 423 KVFD 426 (939)
T ss_pred HHhc
Confidence 9984
No 377
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.23 E-value=3.2e-11 Score=97.45 Aligned_cols=116 Identities=22% Similarity=0.367 Sum_probs=85.6
Q ss_pred hhhHHHHHHHHHHh-ccc-cCCCCeeeccCCCCCC-------------CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014631 24 TLTVRSALTIIKQN-LKE-NDPRPIIPLGHGDPSA-------------FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGI 88 (421)
Q Consensus 24 ~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~g~~~~-------------~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 88 (421)
.++....+..+.+. ++. .....+|+|+.+.-.+ .+.+..++.+.+++.+. ..|.+..|.
T Consensus 21 ~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~~G~ 94 (153)
T PLN02994 21 ASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDYHGL 94 (153)
T ss_pred CchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCCCCc
Confidence 44555555555543 333 2355688888775211 02233444444444442 348888999
Q ss_pred HHHHHHHHHHHhhhCC--CCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc
Q 014631 89 LPARRAIADYLNSELP--CKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL 145 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~--~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~ 145 (421)
++||+++|+|+.+.+| +.+++++|++|+|+++++..++.++++|||.|++++|.|++
T Consensus 95 ~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 95 ANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred HHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 9999999999999888 67889999999999999999999999999999999999974
No 378
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.17 E-value=3.1e-08 Score=92.70 Aligned_cols=273 Identities=18% Similarity=0.235 Sum_probs=143.1
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL---ARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL 162 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 162 (421)
++...++++. +.+..+.-+-.+++.+-..+..+. .+..++|+++...|+.+... +...|.+++.++.
T Consensus 114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~ 187 (429)
T PF02347_consen 114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL 187 (429)
T ss_dssp HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence 4555555655 244445567777777666655443 23346999999999988764 4456888888876
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS 242 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 242 (421)
+.+.. .| ++++.++++.+|++ .|.+ +++++|.++++++|.++++ .+.-. ...+ ..+-..++.
T Consensus 188 ~~~~~--~d--------~~~~a~v~vq~Pn~-~G~~---ed~~~i~~~~h~~gal~~~-~ad~~-aL~~--l~~Pge~GA 249 (429)
T PF02347_consen 188 DEDGT--TD--------DDDTAAVMVQNPNT-FGVF---EDIKEIADIAHAAGALVIV-GADPN-ALGG--LKSPGEYGA 249 (429)
T ss_dssp BTTCS--B---------STTEEEEEEESS-T-TSB-----THHHHHHHHHHTT-EEEE-CGGCC-GCCT--C--GGGGT-
T ss_pred cccCC--cc--------ccCeEEEEeecCCC-CceE---eeHHHHHHHHHHcCCEEEE-ecCHH-HHhC--cCChhhcCc
Confidence 53322 23 56788999999996 8888 7799999999999999886 33211 1112 112234444
Q ss_pred CCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHH----------------------------Hhhhccc
Q 014631 243 TVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDS----------------------------IKGYLNI 290 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~ 290 (421)
+ |++++ +|.||.| |.-+|++.+++. +.+. +++.+..
T Consensus 250 D---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~--------l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAt 317 (429)
T PF02347_consen 250 D---IVVGE-HQTFGIPMGFGGPGAGFFAVRED--------LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKAT 317 (429)
T ss_dssp S---EEEEC-CTTTT---CCC-S--EEEEE-GG--------GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCST
T ss_pred c---EEeeC-CCCCcccCCCCCCCeeeEEEhhh--------hhhhCCCceecccccccccceeeeccccccccccccchh
Confidence 3 65665 7777753 556788887542 1121 1122111
Q ss_pred -ccCCchHH-HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHH
Q 014631 291 -SSGPATFV-QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368 (421)
Q Consensus 291 -~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (421)
..+.+... ..++..++.....+++.+..++...+..++.+.|+++.++. + ....+|-++.... .. .-
T Consensus 318 SNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~ 386 (429)
T PF02347_consen 318 SNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KE 386 (429)
T ss_dssp T---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HH
T ss_pred hhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HH
Confidence 11222222 22333444444578999999999999999999999873333 2 2223433332221 11 12
Q ss_pred HHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 369 ALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 369 ~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
+.+++ ++++.-.-+..+...+.+-+|+. +++++|+++++.|
T Consensus 387 ~~~l~-~~~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 387 VEELL-KRGIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp HHHHH-HTT----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHHHH-HHHHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 22232 22332211111222458888887 7899999998864
No 379
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.15 E-value=1.1e-07 Score=87.14 Aligned_cols=322 Identities=11% Similarity=0.082 Sum_probs=185.5
Q ss_pred CCCCCCCHHHHHHHHHHHhhhCCCCC--------CCCcEEEcCCHHHHHHHHHHH-h------cCCC-----------C-
Q 014631 82 YSPSVGILPARRAIADYLNSELPCKL--------SPDDVYLTAGCKQAIQVILTV-L------ARPG-----------A- 134 (421)
Q Consensus 82 y~~~~g~~~l~~~ia~~l~~~~~~~~--------~~~~i~~~~g~~~al~~~~~~-l------~~~g-----------d- 134 (421)
...++...||+..+-+|+++..+.+. +.-.++. .+++++...++-+ - .+.+ +
T Consensus 105 W~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ-~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~l 183 (511)
T KOG0628|consen 105 WASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQ-GTASESVLVALLAARTEKIEEIKSRPPELHESSVLARL 183 (511)
T ss_pred eecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEe-cCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhh
Confidence 34556689999999999998776532 2223443 3444554444322 1 1111 2
Q ss_pred eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCc-----eEEEEeCCCCCcccccCHHHHHHHHH
Q 014631 135 NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT-----VAMVIVNPGNPCGNVFTYQQLQKIAE 209 (421)
Q Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~-----~~i~~~~p~nptG~~~~~~~l~~i~~ 209 (421)
.+.+++.+|++...++...|.+.+.++.+. +++++.+.|++++.++. ..+++.+. ..||. ...+++.+|..
T Consensus 184 V~Y~SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~-GTT~~-ca~D~l~elg~ 259 (511)
T KOG0628|consen 184 VAYCSDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATL-GTTSS-CAFDELEELGP 259 (511)
T ss_pred eEEecCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEee-cCccc-cccccHHHhcc
Confidence 345578999999999999999988888643 88999999999886532 22222222 22332 34489999999
Q ss_pred HHHhcCcEEEEcccccccccCCCCcccc-cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh----HHHHHH-H
Q 014631 210 KARKLGIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ----ELRIVD-S 283 (421)
Q Consensus 210 ~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~-~ 283 (421)
+|+++|+++++|.+|++..+.-+.+..+ ..++.-+ -+-...||+ ++--+-|..+.+.+...+.. ++...+ .
T Consensus 260 Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628|consen 260 VCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred hhhhcCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcch
Confidence 9999999999999999765443322211 1111111 223456787 45556666666654311100 010111 0
Q ss_pred Hhhhc-ccccCCchHH--HHHHHH--HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 284 IKGYL-NISSGPATFV--QGAVPQ--IFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 284 ~~~~~-~~~~~~~~~~--~~~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
..... .+-...-++. ..++.. .++...-+.+.+..++.-++.+.+.+.+.+-+.++++.+..-| .+.+++....
T Consensus 337 ~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lg-LvcFRlk~~N 415 (511)
T KOG0628|consen 337 YQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILG-LVCFRLKGDN 415 (511)
T ss_pred hhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeecccccc-eeEEeecCCc
Confidence 00000 0000011111 112222 2232223445555555556666666666666678755333334 3334554321
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~ 417 (421)
...+.++.++-....|.+.|.+. ...=.+|++++ ++.++++++-+.|.+..+++
T Consensus 416 ----~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628|consen 416 ----EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred ----HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHH
Confidence 23667888887778888888653 22335899987 67899999999999888774
No 380
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.11 E-value=8.6e-08 Score=85.86 Aligned_cols=330 Identities=14% Similarity=0.118 Sum_probs=182.5
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----CC--CCHHHHHHHHHHHhhhCCCCCCCCcEEE-cC
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP----SV--GILPARRAIADYLNSELPCKLSPDDVYL-TA 116 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----~~--g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~ 116 (421)
+.+.||+.| |+ -.|+++++.+++.+......+++. .+ -...+.+...+.+.+.++++-+- +|+| -.
T Consensus 4 ~~~~nFsaG-Pa-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y-~VlflqG 76 (365)
T COG1932 4 PRVYNFSAG-PA-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDY-KVLFLQG 76 (365)
T ss_pred CCCCCCCCC-cc-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCc-eEEEEcC
Confidence 457889988 33 356677777766655422112211 11 12333333334444445555433 4555 45
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcch-HHHHhhcCceeEeeec-cCCCCcc--CCHHHHHhhhccCceEEEEeCCC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLY-EANARHTRLEIRHFDL-LPEKGWE--VDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~-~~~~~~~g~~~~~~~~-~~~~~~~--~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
|+|.....+...|+.....-.+....|... ..-++..+-.+..... ..+.+++ ++++.+. +.++..-|.+|.-.
T Consensus 77 Gat~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~Ne 154 (365)
T COG1932 77 GATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNE 154 (365)
T ss_pred ccHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCC
Confidence 678888888888875443202222233221 2333444432111111 1112222 2333322 23332224444444
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
.-+|+.++. ...+. .+.++|.|....-+. ...++..++ ++..+-.|.+|..| ++.++++
T Consensus 155 Ti~Gv~v~~--~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr--- 213 (365)
T COG1932 155 TISGVEVPE--LPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVR--- 213 (365)
T ss_pred cccceEccC--CCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEc---
Confidence 466887652 21111 127888897765543 233444444 55668999999888 7888885
Q ss_pred cchhHHHHHHHHhhh--------------cccccCCchHHHHHHHHHhhcc-chhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 273 GILQELRIVDSIKGY--------------LNISSGPATFVQGAVPQIFKNT-KEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+++.++.+.. .....+|+.++.+.....++-. ...+++...++.+++.+.+++.+.+. +
T Consensus 214 -----~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~ 287 (365)
T COG1932 214 -----PDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-D 287 (365)
T ss_pred -----HHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 3555555442 1123466667766665555442 25778888999999999999999986 4
Q ss_pred ccc-cCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 338 ITC-PRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 338 ~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
+.. ...+. .-+-+.+.+.... -+..|+.+ ++++|+...-|+ ...+.+|+++. .+.|+++.+++-++.
T Consensus 288 fy~~~v~~~~RS~mnV~f~~~~~~-----ld~~fv~e-ae~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~ 359 (365)
T COG1932 288 FYRNLVAKANRSRMNVTFTLVDAE-----LDKGFVAE-AEAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDW 359 (365)
T ss_pred ccccccchhhccceeEEEEcCcHH-----HHHHHHHH-HHHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHH
Confidence 331 11222 2344555555432 24556655 467788887773 23456999997 678999999999988
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
+.+++
T Consensus 360 f~~~~ 364 (365)
T COG1932 360 FEETY 364 (365)
T ss_pred HHHhh
Confidence 87654
No 381
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.06 E-value=2e-08 Score=89.85 Aligned_cols=155 Identities=18% Similarity=0.279 Sum_probs=99.7
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHHHH----------hhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631 116 AGCKQAIQVILTVLARPGANILLPK-PGFPLYEANA----------RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV 184 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~----------~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~ 184 (421)
-+||+|+..++..+++|||+++... .-|....... +..|.+...+++.++ ..+|.|.+++.+++++|
T Consensus 79 vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v~L~~d--g~~D~~~i~~~~~~~tk 156 (403)
T PF06838_consen 79 VSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREVPLTED--GTIDWEAIKKALKPNTK 156 (403)
T ss_dssp -SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE--B-TT--SSB-HHHHHHHHHTTEE
T ss_pred cchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEEeecCC--CCcCHHHHHHhhccCce
Confidence 4789999999999999999998653 3354444333 456777788887654 45999999999999999
Q ss_pred EEEEeCC-CCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631 185 AMVIVNP-GNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261 (421)
Q Consensus 185 ~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 261 (421)
.+++--- ...+=..++.++++++++.+|+ .++++++|.+|++|+-.-++ . ..+.+ ++.+|+=|.-| .|+
T Consensus 157 ~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP--~--~vGAD---l~aGSLIKNpG-Ggi 228 (403)
T PF06838_consen 157 MVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP--T--EVGAD---LMAGSLIKNPG-GGI 228 (403)
T ss_dssp EEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G--G--GGT-S---EEEEETTSGGG-TTT
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc--c--ccchh---heeccceeCCC-CCc
Confidence 8877533 4444456788999999999995 47899999999998732221 1 33333 88999999954 343
Q ss_pred --eEEEEEeeCCCcchhHHHHHHHHhhhc
Q 014631 262 --RLGWLVTSDPSGILQELRIVDSIKGYL 288 (421)
Q Consensus 262 --r~G~~~~~~~~~~~~~~~~~~~~~~~~ 288 (421)
--||++++ +++.++.....
T Consensus 229 AptGGYIaGr--------~~lVe~~a~RL 249 (403)
T PF06838_consen 229 APTGGYIAGR--------KDLVERAAYRL 249 (403)
T ss_dssp -SS-EEEEES--------HHHHHHHHHHH
T ss_pred cCcCCEEech--------HHHHHHHHhhh
Confidence 35999985 57777765554
No 382
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.03 E-value=2.7e-07 Score=81.95 Aligned_cols=314 Identities=17% Similarity=0.154 Sum_probs=193.8
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----CCCeEEEcCCCCc-chHHHHhhcC
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----PGANILLPKPGFP-LYEANARHTR 154 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~gd~Vl~~~p~y~-~~~~~~~~~g 154 (421)
.|..+.++-.|.+++.+.++ -+.++-|+-|..|=++++..+++ ||.+.++++..|. ......+..|
T Consensus 74 AYagsrs~~~L~~avkdifG--------fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIFG--------FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhcC--------ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 68888888999999999873 35677788888888888877765 5555566666665 4466677788
Q ss_pred ceeEeeeccCCC--------CccCCHHHHHhhhcc----CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 155 LEIRHFDLLPEK--------GWEVDLDGLEALADE----NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 155 ~~~~~~~~~~~~--------~~~~d~e~l~~~~~~----~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
..++.++++... ...+|++.|++++++ +...|+++-- |...|+..|.+.+++..++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 887777654221 135799999998864 4445544444 446789999999999999999999999999
Q ss_pred cccc-ccccC------CCCccccccc-----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc
Q 014631 222 EVYD-HLTFG------STPYVRMGVF-----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN 289 (421)
Q Consensus 222 e~~~-~~~~~------~~~~~~~~~~-----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (421)
.+-. .-.+- |-.-+++... ..-| -...|.-|- ++..+ .|+++.+++. .+ ++...++....
T Consensus 226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD--~~~mS~KKD-~lvnm-GGfl~~~D~~-~f---Dvy~~~~~~~V 297 (471)
T COG3033 226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD--GCTMSAKKD-GLVNM-GGFLCFKDDS-FF---DVYEECRTLVV 297 (471)
T ss_pred hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh--hheeecccc-ceecc-ccEEEecCcc-HH---HHHHHHHhheE
Confidence 7632 11110 0001111111 1111 123355566 54321 2666665532 22 34455544332
Q ss_pred ------cccCCchHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--cc
Q 014631 290 ------ISSGPATFVQGAVPQIFKN-TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LE 360 (421)
Q Consensus 290 ------~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~ 360 (421)
..++.+.-...+++..|.+ ...+|+..+..+.+ ++.+.|++. |+. +..|.||.-+++...... .+
T Consensus 298 ~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~-GVp-i~~paGGHavfvda~~~lphip 371 (471)
T COG3033 298 VQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLPHIP 371 (471)
T ss_pred eeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhc-CCe-eEecCCCceEEeehhhhcCCCC
Confidence 1223333334444444543 22567776665554 455666665 887 447888887777643211 00
Q ss_pred -CCCChHHHHHHHHhhcCeeEEeCCCC--CC-----------CCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631 361 -GISDDMEFALQLAKEESVIVLPGMAV--GM-----------KNWLRITFA---IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 361 -~~~~~~~~~~~ll~~~gv~v~~g~~~--~~-----------~~~iRi~~~---~~~e~l~~~~~~l~~~~~~ 416 (421)
.......+..+|-++.||-.+--..| +. -.-+|+++. .+.+-++.+++.++++.+.
T Consensus 372 ~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 372 AEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred hhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhc
Confidence 11135678888889999976543332 11 146999997 5789999999999887754
No 383
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.02 E-value=6.9e-08 Score=88.22 Aligned_cols=223 Identities=16% Similarity=0.120 Sum_probs=147.7
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCC--HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGI--LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~--~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~ 138 (421)
...+++.+++.+.+.......|.-..|. ..+. .++..+ ++ -...+.++++++.+.|+.+++.++.++ .+|++
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~---~~-~~~aea~~ivnnn~aAVll~~~al~~~-~EvVi 111 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELL---CG-LTGAEAAAIVNNNAAAVLLTLNALAEG-KEVVV 111 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHH---hc-ccchhheeeECCcHHHHHHHHhhhccC-CeEEE
Confidence 4568888999888876533344333322 2333 333333 22 234678999999999999999888764 45544
Q ss_pred c-----CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 139 P-----KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 139 ~-----~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
. +++++......+..|++.+.+... + .-...+++.++.+++..++-+.-+|- |.. ..=.+++++++|++
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~t--n--~t~~~d~~~AIne~ta~llkV~s~~~-~f~-~~l~~~~l~~ia~~ 185 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTT--N--RTHLKDYELAINENTALLLKVHSSNY-GFT-GMLSEEELVEIAHE 185 (395)
T ss_pred EccccccCCCCChhHHHHHcCCEEEEeccc--C--cCCHHHHHHHhccCCeeEEEEeeccc-ccc-ccccHHHHHHHHHH
Confidence 3 157778899999999998887632 2 25788999999999998876655542 322 11236778899999
Q ss_pred cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-ccc
Q 014631 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISS 292 (421)
Q Consensus 214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 292 (421)
+|+++++|.+.+...............+.+ ++++|-.|.+ .|.+-|.+++. +++++++++... ...
T Consensus 186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKll--gGPqaGii~Gk--------KelI~~lq~~~l~Ral 252 (395)
T COG1921 186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKLL--GGPQAGIIVGK--------KELIEKLQSHPLKRAL 252 (395)
T ss_pred cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchhc--CCCccceEech--------HHHHHHHHhhhhhhhh
Confidence 999999999987754311222222233333 7788999995 56668999984 678888877643 223
Q ss_pred CCchHHHHHHHHHhhc
Q 014631 293 GPATFVQGAVPQIFKN 308 (421)
Q Consensus 293 ~~~~~~~~~~~~~l~~ 308 (421)
-......+++.++|+.
T Consensus 253 rv~K~tla~l~~aLe~ 268 (395)
T COG1921 253 RVDKETLAALEAALEL 268 (395)
T ss_pred hcCcHhHHHHHHHHHH
Confidence 4555666666666654
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=99.00 E-value=6.6e-08 Score=87.63 Aligned_cols=315 Identities=13% Similarity=0.115 Sum_probs=176.3
Q ss_pred CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-------cCCC-----CeE-EEcCCCCcchH
Q 014631 81 CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-------ARPG-----ANI-LLPKPGFPLYE 147 (421)
Q Consensus 81 ~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g-----d~V-l~~~p~y~~~~ 147 (421)
.|.......-.++.+-....+-.|+....+.|+--.|+.+.+..+.-+- ...| +-| .+++.+|++..
T Consensus 132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 4544444334444444444444555555556665555555555443221 1122 333 44678899999
Q ss_pred HHHhhcCce---eEeeeccCCCCccCCHHHHHhhhcc-Cce-EE-EEeCC---CCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631 148 ANARHTRLE---IRHFDLLPEKGWEVDLDGLEALADE-NTV-AM-VIVNP---GNPCGNVFTYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 148 ~~~~~~g~~---~~~~~~~~~~~~~~d~e~l~~~~~~-~~~-~i-~~~~p---~nptG~~~~~~~l~~i~~~~~~~~~~l 218 (421)
.++...|.. .+.++.+ ..+.+++++||+.+.. +.+ .+ ++.+. +..-|.. ++|..|+++|.+|++++
T Consensus 212 kaAa~lg~gtd~c~~v~t~--e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAF---DdL~~iadiC~k~~lWm 286 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKTD--ERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAF---DDLNGIADICEKHKLWM 286 (510)
T ss_pred HHHHHhccCCceeEEeccc--ccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeecc---CcHHHHHHHHHhcCEEE
Confidence 999999954 4445433 3457999999986632 111 11 33333 4455666 88999999999999999
Q ss_pred EEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc---------
Q 014631 219 ISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL--------- 288 (421)
Q Consensus 219 i~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~--------- 288 (421)
++|.++++.. ........+.....-+ -+.-+.+|. ....+.|+..+.+.+. +.+++.+..
T Consensus 287 HvDAAwGGglLmS~k~R~kl~Giera~--SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~~Cn~~~A~YLFq~dK 356 (510)
T KOG0629|consen 287 HVDAAWGGGLLMSRKHRHKLTGIERAN--SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQRCNQMSAIYLFQQDK 356 (510)
T ss_pred EeecccccccccChhhHhhccCccccC--ceeecHHHh-hcCcchhhHHHHHHHH-------HHHhhcccchhhhhccCc
Confidence 9999998733 2222222222222221 122378899 4567888888775322 333332211
Q ss_pred cc---ccCCchHHHHH-------HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC--CCceeE-EEEecC
Q 014631 289 NI---SSGPATFVQGA-------VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK--PEGSMF-VMVKLN 355 (421)
Q Consensus 289 ~~---~~~~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~--~~~~~~-~~~~~~ 355 (421)
.+ .-+..-..|.. +-..++.....++++..+++-++++++.+.+++.+++..+.. |+..++ +|. +|
T Consensus 357 ~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~-vp 435 (510)
T KOG0629|consen 357 FYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWY-VP 435 (510)
T ss_pred eeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeecc-Cc
Confidence 00 11222233332 222233334577888899999999999999998877543323 453322 332 22
Q ss_pred cccccCCCC-----------hHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec---CCHHHHHHHHHHHHHH
Q 014631 356 LSLLEGISD-----------DMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA---IEPSALEEGLGRIKAF 413 (421)
Q Consensus 356 ~~~~~~~~~-----------~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~---~~~e~l~~~~~~l~~~ 413 (421)
.. +.+... ...+-..++ +.|..+..-...+. ++.+|+-++ .+.++++.+++.|..+
T Consensus 436 ~~-lR~~~~~~e~~~rL~kVaPkIK~~Mm-~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerl 506 (510)
T KOG0629|consen 436 PS-LRGWQENPERDSRLVKVAPKIKERMM-KKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERL 506 (510)
T ss_pred hH-hccCcccchhhhHHHhhCcHHHHHHH-hccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHh
Confidence 21 111111 112233333 34666654443333 568999887 3678999999988765
No 385
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.89 E-value=8e-07 Score=81.34 Aligned_cols=288 Identities=12% Similarity=0.100 Sum_probs=151.7
Q ss_pred CcEEEcCCHH-HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC-ccCCHHHHHhhhc---cC
Q 014631 110 DDVYLTAGCK-QAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG-WEVDLDGLEALAD---EN 182 (421)
Q Consensus 110 ~~i~~~~g~~-~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~~~---~~ 182 (421)
...++++-+| .++.+.+.++. ..++.|+.+.-.+.+...++...|.+++.++...+.+ ...|.+.+++.++ +.
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~ 154 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD 154 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence 4456665544 34444455553 3568999998888888899999999999988543322 3346677777664 35
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc---ccCCCCCEEEEcccccccCCC
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG---VFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~---~~~~~~~~i~~~s~sK~~~~~ 259 (421)
....+++.++.-.+... +++++|+++|++||+..|+..||+.-... ....+. ..+. -.+++.|+-|-|..|
T Consensus 155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GR--vda~vqS~dkNF~VP 228 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGR--VDAFVQSTDKNFMVP 228 (389)
T ss_dssp GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHST--CSEEEEEHHHHHCEE
T ss_pred CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCC--cceeeeecCCCEEec
Confidence 56667877765455551 56999999999999999999999861100 000000 0111 116788999998654
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh----cC
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK----EI 335 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~ 335 (421)
..-+.+..++ +.++..+......- ....+........+.. ....+........+...++.++|+ +.
T Consensus 229 -vGgai~As~~-------~~~i~~vs~~YpGR-as~sp~ld~~itLl~L-G~~g~~~ll~~r~~~f~~l~erl~~~aee~ 298 (389)
T PF05889_consen 229 -VGGAIMASFD-------PSGILAVSKEYPGR-ASASPSLDLFITLLSL-GCTGYGALLKERKASFPYLKERLKKWAEEV 298 (389)
T ss_dssp -SSHEEEEESS-------HHHHHHHHHTSHSH-BTSHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCCcEEEecC-------HHHHHHHHHHhhhh-hhcccchHHHHHHHHH-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 2235555543 45666665544221 1111222233333332 222333333333344444444433 23
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCCCC-------CCCCeEEEEe--cCCHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGMAV-------GMKNWLRITF--AIEPSA 402 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~-------~~~~~iRi~~--~~~~e~ 402 (421)
+-.+...|.+...+.+.++....... ...-++-..|..+||. |.++..+ ++..++-++. +.++||
T Consensus 299 -~e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~ee 376 (389)
T PF05889_consen 299 -GERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREE 376 (389)
T ss_dssp -TEEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHH
T ss_pred -hhhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHH
Confidence 22223345554444455543211000 2344555666777774 3333221 1236777754 489999
Q ss_pred HHHHHHHHHHHHH
Q 014631 403 LEEGLGRIKAFCQ 415 (421)
Q Consensus 403 l~~~~~~l~~~~~ 415 (421)
++.++++|+++++
T Consensus 377 vd~~v~rL~k~i~ 389 (389)
T PF05889_consen 377 VDYFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999874
No 386
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.84 E-value=1.1e-06 Score=77.94 Aligned_cols=218 Identities=15% Similarity=0.141 Sum_probs=118.0
Q ss_pred CHHHHHhhhc-----cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc--cC
Q 014631 171 DLDGLEALAD-----ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV--FG 241 (421)
Q Consensus 171 d~e~l~~~~~-----~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~ 241 (421)
.++++|+++. +.+.+.+++.| +...|- -.|++..++|.+++++||+.+|+||++.+.+.+|. ++.... ++
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk-~WaHehw~l~ 332 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGK-FWAHEHWNLD 332 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCc-eeeehhcCCC
Confidence 4566666553 23556677888 666664 46889999999999999999999999998765553 333333 33
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccch-hHHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKE-DFFSKIVDI 320 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~ 320 (421)
....++ +|||-|..+ ||..- ++..- -+..+.+ +.+ +..+.-...+.++++...+ ..+++....
T Consensus 333 ~PpD~v---TFSKK~q~g----Gffh~--~~frp-----n~pYrif-NTW-mGdP~k~lll~~vv~~I~~~~Ll~n~~~v 396 (484)
T KOG1405|consen 333 SPPDVV---TFSKKFQTG----GFFHD--EEFRP-----NEPYRIF-NTW-MGDPSKNLLLEEVVQEIKREDLLNNVAHV 396 (484)
T ss_pred CCccce---ehhhhhhcC----ccccC--cccCC-----CchHHHh-hhh-cCChHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 332233 899997444 44432 11000 0111111 122 2222222222333332222 223332222
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--C
Q 014631 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--I 398 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~ 398 (421)
-..+...+.+.-++.|+.---....|+ |.-+.++.. ...+.+...++-+||.+..+ + ...||+-++ .
T Consensus 397 G~~l~~gL~~Lq~~~p~~~~~~RGrGT-F~a~d~ps~------~~Rdk~i~~~~~nGv~~GGC---g-~~siRfRPsLvf 465 (484)
T KOG1405|consen 397 GKALLKGLLELQAKYPGKINNLRGRGT-FIAWDCPSG------SIRDKLILIARLNGVNLGGC---G-DKSIRFRPSLVF 465 (484)
T ss_pred HHHHHHHHHHHHHhCchhhhcccccce-EEEEeCCCh------HHHHHHHHHHHHcCceeccc---c-cceeeeccceee
Confidence 222333333333345664313344544 554577653 24455555668889877432 2 345666655 6
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 014631 399 EPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 399 ~~e~l~~~~~~l~~~~~~ 416 (421)
.+.-.+-+++++.+++..
T Consensus 466 ~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 466 RKHHADIFLDIFDKILAG 483 (484)
T ss_pred hhhhHHHHHHHHHHHhcc
Confidence 777888888888887754
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.79 E-value=1.2e-08 Score=92.43 Aligned_cols=251 Identities=16% Similarity=0.162 Sum_probs=50.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCC-----CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCe
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVG-----ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g-----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~ 135 (421)
+.++++.+++.+.........|.-..| +..+++.++.+. ..+..+++++...|+.+++.++. +|.+
T Consensus 17 ~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~lt--------gAeaA~VvNnnaAAv~L~l~~la-~~~E 87 (367)
T PF03841_consen 17 PLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCELT--------GAEAALVVNNNAAAVLLALNTLA-KGKE 87 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------ccccccccccccccccccccccc-cccc
Confidence 456778888877765533334432222 233444444433 35678888888899999988885 5678
Q ss_pred EEEcCCCCcc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC--cccccCHHHHHHH
Q 014631 136 ILLPKPGFPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP--CGNVFTYQQLQKI 207 (421)
Q Consensus 136 Vl~~~p~y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np--tG~~~~~~~l~~i 207 (421)
|+++...-.. +..+.+..|++++.+... + .-.++++++++.++|.+++..+++|- .|..-. -.++++
T Consensus 88 vIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt--N--~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~el 162 (367)
T PF03841_consen 88 VIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT--N--RTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEEL 162 (367)
T ss_dssp ------------------------------------------------------------------------------HH
T ss_pred cccccccccccccccccccccccccccccccccc--c--cccccccccccccccccccccccccccccccccc-ccHHHH
Confidence 8776433221 345667788888777642 2 24678899999999999999998774 232211 358999
Q ss_pred HHHHHhcCcEEEEcccccccc----cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 208 AEKARKLGIMVISDEVYDHLT----FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 208 ~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
++++++||+++|+|-..+.+. ++-...+.+..+-..+-.++++|-.|.+| |...|.+++. ++++++
T Consensus 163 ~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gk--------k~lI~~ 232 (367)
T PF03841_consen 163 AELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGK--------KELIEK 232 (367)
T ss_dssp HHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEE--------HHHHHH
T ss_pred HHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeC--------HHHHHH
Confidence 999999999999997763322 11111122333322222377778889865 4558999995 578888
Q ss_pred Hhhhcc-cccCCchHHHHHHHHHhhccch-----------hHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 284 IKGYLN-ISSGPATFVQGAVPQIFKNTKE-----------DFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 284 ~~~~~~-~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++..- ...-.......++.++|+.... ..+....+.++++.+.+.+.|...
T Consensus 233 lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~ 296 (367)
T PF03841_consen 233 LKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAA 296 (367)
T ss_dssp HHHHHHTTT-B--HHHHHHHHHHHHH--------------------------------------
T ss_pred HhhCCCcceEeeCHHHHHHHHHHHHHHHHhhccccccccccccccccccccccccccccccccc
Confidence 876542 2234566667776666654221 123333455566666666666643
No 388
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.77 E-value=3.8e-05 Score=70.43 Aligned_cols=337 Identities=18% Similarity=0.201 Sum_probs=184.5
Q ss_pred HHHHHHHhccccCCCCee-eccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHH
Q 014631 30 ALTIIKQNLKENDPRPII-PLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADY 98 (421)
Q Consensus 30 ~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~ 98 (421)
...++++...++. .+. .+|.|.-. ...|+.+...+. .++. +..|.|.+ | +-++..-++++
T Consensus 62 ~l~~l~~ia~kN~--~~~sfiG~GyY~----~~~P~vI~rnil---e~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL 132 (450)
T COG0403 62 ALAELKEIASKNK--VFTSFIGAGYYD----TYTPPVILRNIL---ENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL 132 (450)
T ss_pred HHHHHHHHHhcCc--hhhhhccCcccC----CcCcHHHHHHhh---cCccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 4444444444432 222 34555422 245666653333 3432 34565543 2 22334445555
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc---CCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCC
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLA---RPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVD 171 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d 171 (421)
. +.+-.+.-+-.++|.+-+++..+.. .+..+++++...|+.+....+ -.|.+++.++.+ |
T Consensus 133 T------Gm~VANASm~DeaTAaAEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d 199 (450)
T COG0403 133 T------GLDVANASMLDEATAAAEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------D 199 (450)
T ss_pred h------CCCcccchhhhhHHHHHHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------h
Confidence 4 3455666677777777666665542 335899999999998877665 345555555432 6
Q ss_pred HHHHHhhhccCceEEEEeCCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEc-ccccccccCCCCcccccccCCCCCEEEE
Q 014631 172 LDGLEALADENTVAMVIVNPGNPCG-NVFTYQQLQKIAEKARKLGIMVISD-EVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~D-e~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
.+++++....++.++++-.|+. .| .. +++++|.+.++++|.++++= |.-+.... .+-..++.+ |++
T Consensus 200 ~~~l~~~~~~~~~gv~vQyP~~-~G~~~---~d~~~l~~~~h~~~al~~v~aDplaL~LL-----~pPGe~GAD---Ivv 267 (450)
T COG0403 200 LDDLESADDGDVFGVLVQYPNT-FGIVE---EDLRALIEAAHSAGALVIVAADPLALGLL-----KPPGEFGAD---IVV 267 (450)
T ss_pred hhhhhhccccCeEEEEEecCCC-CCccc---hhHHHHHHHHhhcCCEEEEEechhHhhcc-----CCccccCCc---eEE
Confidence 7777777333677888888884 66 44 77999999999999877642 22222111 112233333 777
Q ss_pred cccccccCC----CCceEEEEEeeCCC-------------cchhHHHHH-------HHHhhhcccc-cCCchH-HHHHHH
Q 014631 250 GSMSKRWIV----PGWRLGWLVTSDPS-------------GILQELRIV-------DSIKGYLNIS-SGPATF-VQGAVP 303 (421)
Q Consensus 250 ~s~sK~~~~----~G~r~G~~~~~~~~-------------~~~~~~~~~-------~~~~~~~~~~-~~~~~~-~~~~~~ 303 (421)
++..-. |. +|.-+||..+.+.- ....++.+. +.+++.+..+ -|.+.. ...++.
T Consensus 268 G~~Qrf-GvPmgfGGPhag~fA~~~~~~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As 346 (450)
T COG0403 268 GSAQRF-GVPMGFGGPHAGYFAVKDEFKRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAAS 346 (450)
T ss_pred ecCccc-CCCcCCCCcceeeeeEhHhHhhcCCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHH
Confidence 766544 43 35668888775310 000000010 1112222111 122211 111222
Q ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 304 QIFKNTKEDFFSKIVDILRDTADICYDRIKEIP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 304 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
.++......++.++.++..++..++.+.|++.. |+... .. .+|-.+.+.... .....++. .....|+-+..
T Consensus 347 ~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~--~~-~fFdt~~v~~~~----~~~~~l~~-~~~~~G~~L~~ 418 (450)
T COG0403 347 MYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELV--FD-HFFDTFTVRVPE----EVAEALLA-AAIAGGINLRR 418 (450)
T ss_pred HHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEec--cc-cceeeEEEecch----hHHHHHHH-HHHhcCCceee
Confidence 223334578999999999999999999999652 46622 22 556555444210 01222222 23445766654
Q ss_pred CCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 383 GMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 383 g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
-. .+.+-+++. +++++++.+++.+...
T Consensus 419 ~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 419 VD----ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 22 235666665 6789999999988765
No 389
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.74 E-value=1.4e-05 Score=69.84 Aligned_cols=342 Identities=12% Similarity=0.040 Sum_probs=199.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCC-------CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCY-------SPSVGILPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y-------~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
+.++|.|..+.-. ..|+...+.+.+-++... ..-| +...+-..+-..++... ++..++|.+
T Consensus 65 d~~~iYlcGNSLG-----LmPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~Evav 133 (465)
T KOG3846|consen 65 DKPVIYLCGNSLG-----LMPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAV 133 (465)
T ss_pred CCCeEEEeccccc-----cCchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhh
Confidence 4566666655422 345666666666655411 1112 22233456666677766 467889999
Q ss_pred cCCHHHHHHHHHHHhcCCC---CeEEEcCCCCc----chHHHHhhcCceeEe--eeccC-CCCccCCHHHHHhhhccC--
Q 014631 115 TAGCKQAIQVILTVLARPG---ANILLPKPGFP----LYEANARHTRLEIRH--FDLLP-EKGWEVDLDGLEALADEN-- 182 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~g---d~Vl~~~p~y~----~~~~~~~~~g~~~~~--~~~~~-~~~~~~d~e~l~~~~~~~-- 182 (421)
.++-|..++.++-++.+|- -+|+...-+++ .+...++..|..+.. +-+.| +....+..|++.+.+.++
T Consensus 134 mNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngD 213 (465)
T KOG3846|consen 134 MNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGD 213 (465)
T ss_pred HhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCC
Confidence 9999999999988887765 47888876554 445666777765322 22222 333446778887776542
Q ss_pred -ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCc
Q 014631 183 -TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW 261 (421)
Q Consensus 183 -~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 261 (421)
..+++++..+.-||+.++ +.+|...-+..|.++=.|=+|+. |.-+..++.++.+ +.+-..-|-+..+.-
T Consensus 214 eiA~v~fSGvqyYTGQ~Fd---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgVD---FACWCSYKYlnaGaG 283 (465)
T KOG3846|consen 214 EIALVCFSGVQYYTGQYFD---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGVD---FACWCSYKYLNAGAG 283 (465)
T ss_pred eEEEEEeecceeecccccc---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCCc---eEEEeeecccccCCC
Confidence 344566777999999965 66676655677999999999987 4333344455543 445455576443322
Q ss_pred eEEEEEeeCCCcchhHHHHHHHHhhhc------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHH
Q 014631 262 RLGWLVTSDPSGILQELRIVDSIKGYL------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 262 r~G~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 323 (421)
.+|-+.+.+...-.+.+.+...+..-. ..-++|+.....++...|+...+..+++.+++---
T Consensus 284 gIgGlFvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~l 363 (465)
T KOG3846|consen 284 GIGGLFVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLL 363 (465)
T ss_pred ccceeeeehhhhcchhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhh
Confidence 356666654322222223333221100 01135565666666666665444556666665554
Q ss_pred HHHHHHHHhhcCCC-----------ccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 324 TADICYDRIKEIPC-----------ITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 324 ~~~~~~~~l~~~~g-----------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
+..++...++..-| +.++ .| +.|..+.+.|..+ ...++.+| .++|+.+--- .
T Consensus 364 LTgYleyL~k~~~g~~~~~rt~Kl~~~Ii-TP~~~~erGcQLsl~Fssp-------~~~vfqeL-~krGv~~DkR----~ 430 (465)
T KOG3846|consen 364 LTGYLEYLLKASKGYKHPLRTEKLFFTII-TPTSTDERGCQLSLYFSSP-------TPKVFQEL-HKRGVIGDKR----R 430 (465)
T ss_pred HHhHHHHHHHHhcccCchhhhcceeEEEe-CCcccccccceEEEEeCCC-------chHHHHHH-HHcCeecccc----C
Confidence 44444444433212 2211 22 2344455555431 23455554 7789977432 2
Q ss_pred CCeEEEEec---CCHHHHHHHHHHHHHHHHHhh
Q 014631 389 KNWLRITFA---IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 389 ~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++.||+.+. ++-.|+..+++.|.+++....
T Consensus 431 PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 431 PNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred CCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 688999986 788999999999999987754
No 390
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.64 E-value=2.5e-06 Score=74.13 Aligned_cols=175 Identities=15% Similarity=0.263 Sum_probs=114.0
Q ss_pred CCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC-CcchHH---------
Q 014631 80 DCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-FPLYEA--------- 148 (421)
Q Consensus 80 ~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~~--------- 148 (421)
.+|+ ..-|-.-|++..|+-++. ....-+.-+. ++|+|+..++..+++|||+.+..... |.....
T Consensus 58 tGYGydD~GRdtLe~vyA~vf~a----E~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~ 132 (416)
T COG4100 58 TGYGYDDLGRDTLERVYAQVFGA----EAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQ 132 (416)
T ss_pred CCCCccccchhHHHHHHHHHhcc----ccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCc
Confidence 3555 344556677777776632 2112233343 56889999999999999998775322 333222
Q ss_pred -HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC-CCCcccccCHHHHHHHHHHHHh--cCcEEEEcccc
Q 014631 149 -NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVY 224 (421)
Q Consensus 149 -~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~ 224 (421)
.++..|.+...+++.++ ..+|.+.+...+++++|+|.+--. ....--.++..++++++++.++ .|+++++|.+|
T Consensus 133 gSL~dfgi~Y~~v~Lt~~--gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCY 210 (416)
T COG4100 133 GSLKDFGIKYKAVPLTAD--GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCY 210 (416)
T ss_pred ccHHHhCcceeecccccC--CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccc
Confidence 23445666777777654 359999999999999998866432 2222234666999999999985 47899999999
Q ss_pred cccccCCCCcccccccCCCCCEEEEcccccccCCCCc--eEEEEEee
Q 014631 225 DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGW--RLGWLVTS 269 (421)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~ 269 (421)
+.|+-.-++ . ..+.+ ++.+|+-|. ...|+ -.||+.+.
T Consensus 211 GEFvE~~EP--t--~vGaD---liAGSLIKN-pGGgiaktGGYiaGk 249 (416)
T COG4100 211 GEFVEEKEP--T--HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGK 249 (416)
T ss_pred hhhhhccCc--c--ccchh---hhccceeeC-CCCceeeccceeech
Confidence 998733221 1 22222 678899998 33443 24888874
No 391
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.55 E-value=0.00014 Score=74.76 Aligned_cols=305 Identities=13% Similarity=0.156 Sum_probs=168.9
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCC-----C----CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSV-----G----ILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~-----g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
..+|.|.-. ...|..+.+.+.+ ++. +..|.|.+ | +-++..-++++. +.+-.+.-+-.
T Consensus 82 ~fiG~G~y~----~~~P~vi~~~i~~---~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~Lt------Gm~vaNASl~D 148 (954)
T PRK12566 82 SLIGMGYHG----TVTPTVILRNVLE---NPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLT------GLDLANASLLD 148 (954)
T ss_pred ccccccccC----CcCcHHHHHHHHh---CchhhhcCCCCCchhhhHHHHHHHHHHHHHHHHh------Cchhhhhhhcc
Confidence 345555432 2355555444433 332 34555543 2 223444455554 24444555555
Q ss_pred CHHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631 117 GCKQAIQVILTVL---ARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189 (421)
Q Consensus 117 g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~ 189 (421)
++|.+-+.+..+. ..+..+|++++..|+.+....+ ..|.+++. +++++.+++++.++++.
T Consensus 149 ~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~-------------~~~~~~~~~~~~~v~vq 215 (954)
T PRK12566 149 EATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV-------------DAVDNLAAHAVFGALLQ 215 (954)
T ss_pred chhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE-------------cchhhcCCCCEEEEEEE
Confidence 6665555444333 1224689999999987766554 44555442 23444455567788888
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC----CCCceEEE
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI----VPGWRLGW 265 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~ 265 (421)
+|+. .|.+ +++++|.+++++.|.++|+ .+.- +..+. ..+-..++.+ |++++ ++.|| .+|.-.|+
T Consensus 216 ~P~~-~G~i---~d~~~i~~~~h~~gal~~~-~~d~-laL~l--l~~Pge~GAD---I~vG~-~Q~fGvp~~~GGP~ag~ 283 (954)
T PRK12566 216 YPDT-HGEI---RDLRPLIDQLHGQQALACV-AADL-LSLLV--LTPPGELGAD---VVLGS-TQRFGVPMGYGGPHAAY 283 (954)
T ss_pred CCCC-ceEE---ccHHHHHHHHHHcCCEEEE-EeCH-HHHhC--CCChhhcCCc---EEeeC-CCcCCCCCCCCCCCeee
Confidence 9985 8888 7899999999999988662 2211 01110 1111233333 55653 23333 33455788
Q ss_pred EEeeCCCcchhHHHHHHHH----------------------------hhhcccc-cCCchHHHH-HHHHHhhccchhHHH
Q 014631 266 LVTSDPSGILQELRIVDSI----------------------------KGYLNIS-SGPATFVQG-AVPQIFKNTKEDFFS 315 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~----------------------------~~~~~~~-~~~~~~~~~-~~~~~l~~~~~~~~~ 315 (421)
+.+++ ++..++ ++.+..+ .|.+....+ ++..++.....+++.
T Consensus 284 ~a~~~--------~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~ 355 (954)
T PRK12566 284 FACRD--------DYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLK 355 (954)
T ss_pred eeehH--------HHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHH
Confidence 87753 222222 1111111 112211111 111222223467889
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
++.++...+..++.+.|.+ +|++.. ...+|-.+.+... ....++.. .+.+.|+-++--. .+.+.||
T Consensus 356 ~ia~~~~~~a~~l~~~l~~-~g~~~~---~~~fF~~~~v~~~-----~~~~~~~~-~a~~~~~n~r~~~----~~~~~~s 421 (954)
T PRK12566 356 RIAQRVHRLTAILAAGLEA-KGIKRL---NRHFFDTLTLEVG-----GAQAAIIE-SAEAARINLRILG----RGRLGVS 421 (954)
T ss_pred HHHHHHHHHHHHHHHHHHh-cCCccc---cCCccceEEEEcc-----CCHHHHHH-HHHHCCCeeEEeC----CCeEEEE
Confidence 9999999999999999998 488833 2256655555431 02344444 4566788776432 3568888
Q ss_pred ec--CCHHHHHHHHHHHH
Q 014631 396 FA--IEPSALEEGLGRIK 411 (421)
Q Consensus 396 ~~--~~~e~l~~~~~~l~ 411 (421)
+. ++.+|++.++..+.
T Consensus 422 ~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 422 LDETCDEATVARLFDIFL 439 (954)
T ss_pred eCCCCCHHHHHHHHHHhc
Confidence 86 67899999998884
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.11 E-value=0.00096 Score=64.40 Aligned_cols=303 Identities=15% Similarity=0.133 Sum_probs=172.9
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH-HHH---HHHHHHHh-cCCC---C-eEEEcCCCCcchHHHHhhcCce
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGC-KQA---IQVILTVL-ARPG---A-NILLPKPGFPLYEANARHTRLE 156 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~-~~a---l~~~~~~l-~~~g---d-~Vl~~~p~y~~~~~~~~~~g~~ 156 (421)
+|+.++-..+.++|-.- ..-+.+.+-+++ .++ =..++++. ..+| . .-+++...|...-..+...|.+
T Consensus 578 qGY~~lf~~Le~~Lc~i----TG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magmk 653 (1001)
T KOG2040|consen 578 QGYQQLFTELEKDLCEI----TGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMK 653 (1001)
T ss_pred hhHHHHHHHHHHHhhee----ecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCCE
Confidence 46777777777777542 234667775442 222 22334443 2334 2 4567788888778888999999
Q ss_pred eEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP 233 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 233 (421)
++++..+.. ..+|..+|.+...+ +-.++.++-|+. .|+. .+.+++++++.++||--+..|.+-..-..+=.
T Consensus 654 vvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST-~Gvf--E~~i~d~cd~iHehGGQVYlDGANMNAqVGlc- 727 (1001)
T KOG2040|consen 654 VVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPST-HGVF--EEGIDDICDIIHEHGGQVYLDGANMNAQVGLC- 727 (1001)
T ss_pred EEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEecccc-cccc--cccHHHHHHHHHhcCCEEEecCCCccceeccc-
Confidence 998887643 45999999876644 445677888864 4554 25699999999999999999987644221111
Q ss_pred cccccccCCCCCEEEEcccccccCCC----CceEEEEEeeCCCcchhHHHHHHHHhh-----------hc---cc----c
Q 014631 234 YVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWLVTSDPSGILQELRIVDSIKG-----------YL---NI----S 291 (421)
Q Consensus 234 ~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~~~~-----------~~---~~----~ 291 (421)
.-..++.+ +.=-.++|+|+.| |..+|=+.+.. .++..+-. .. .. +
T Consensus 728 --~pGd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~--------HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~ 794 (1001)
T KOG2040|consen 728 --RPGDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKK--------HLAPFLPSHPVVSPGRPEDTSPVGSVSAAPW 794 (1001)
T ss_pred --CCcccccc---ceeecccceeeecCCCCCCCCCccchhh--------hccccCCCCCccCCCCCCCCCCccceeccCC
Confidence 11122222 3333688888764 33345454421 11111110 00 00 0
Q ss_pred cCC-chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE---EEEecCcccccCCCChHH
Q 014631 292 SGP-ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF---VMVKLNLSLLEGISDDME 367 (421)
Q Consensus 292 ~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 367 (421)
++. -.+...+....|.. .++.+.-+...-+.+++..+|+.+ ..++...+.|.. +.+++.........+..+
T Consensus 795 Gsa~ILpISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~agieavD 869 (1001)
T KOG2040|consen 795 GSALILPISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAGIEAVD 869 (1001)
T ss_pred CcceeehhHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccCCcHHH
Confidence 000 11233444444433 445554555567788999999875 222223333321 223333222112225677
Q ss_pred HHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 368 FALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 368 ~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++.+| ..+|..- |...+-..+.+-|-+. -+.++++++++++-.+-++++
T Consensus 870 vAKRL-~DYgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040|consen 870 VAKRL-MDYGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred HHHHH-HhccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHHHH
Confidence 77776 6788754 4444555677777776 567899999998776655543
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.59 E-value=0.013 Score=51.13 Aligned_cols=329 Identities=14% Similarity=0.151 Sum_probs=172.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-------CCC---CCHHHHHHHHHHHhhhCCCCCCCCcE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-------PSV---GILPARRAIADYLNSELPCKLSPDDV 112 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-------~~~---g~~~l~~~ia~~l~~~~~~~~~~~~i 112 (421)
..+++||+.|- . ..|..|...+++.+-+....+-+ +.. -+...+..+.+++ +++-+-.-+
T Consensus 5 ~~~vvnFaaGP-A-----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLl----niPdn~~vl 74 (370)
T KOG2790|consen 5 PERVVNFAAGP-A-----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELL----NIPDNYKVL 74 (370)
T ss_pred ccceeecCCCc-c-----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHH----cCCCceeEE
Confidence 56889999884 3 24455555555444331111110 111 1334455555555 434333345
Q ss_pred EEcCCHHHHHHHHHHHhc--CCC---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc--cCCHHHHHhhhccCceE
Q 014631 113 YLTAGCKQAIQVILTVLA--RPG---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW--EVDLDGLEALADENTVA 185 (421)
Q Consensus 113 ~~~~g~~~al~~~~~~l~--~~g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~--~~d~e~l~~~~~~~~~~ 185 (421)
++-.|||.-..++...|. +.| |-|++-..+--++.. ++.+|..-..++-..+..+ -+|.+.++. +++.+-
T Consensus 75 f~QGGGt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~y 151 (370)
T KOG2790|consen 75 FLQGGGTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASY 151 (370)
T ss_pred EEeCCCcccccccchhhhccccCCccceEEeccccHHHHHH-HHhhCCceEEeccccccccCcCCChhhccc--CCCccE
Confidence 666777877777766664 444 555554433333333 3344533222221111111 134444332 334455
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
+.+|.--..-|+-++.-. +-..+|.+++.|-..-.+. .+.++..+ -+++....|..|.+|+ -.
T Consensus 152 vyyCaNETVHGVEf~~~P------~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG~--Tv 214 (370)
T KOG2790|consen 152 VYYCANETVHGVEFDFIP------VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAGV--TV 214 (370)
T ss_pred EEEecCceeeceecCCCC------CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCcccc--EE
Confidence 666544344566543222 1135688888886654432 12233222 2666678999888884 55
Q ss_pred EEeeCCCcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 014631 266 LVTSDPSGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 331 (421)
+++++ +++..... ......+++.+..++....++... ..++....+...+....+++.
T Consensus 215 vivr~--------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~ 286 (370)
T KOG2790|consen 215 VIVRK--------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDA 286 (370)
T ss_pred EEEeh--------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 55542 23322211 112234566666555544444322 356677777788889999999
Q ss_pred hhcCCCcc-ccCCCCc--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHH
Q 014631 332 IKEIPCIT-CPRKPEG--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEG 406 (421)
Q Consensus 332 l~~~~g~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~ 406 (421)
+.+..|+. |+..|.. -+-+.+++.... -..+|+.+.++ ++..-.-|+. .-+.+|-|+= .+-++.+++
T Consensus 287 iD~s~gfy~cpVe~~~RS~MNV~Fri~~d~-----Le~eFLkeA~~-~~mv~LKGhR--SVGGiRASlYNAisv~~~q~L 358 (370)
T KOG2790|consen 287 IDNSNGFYRCPVEPSVRSRMNVPFRIEKDE-----LEAEFLKEAAK-EHMVQLKGHR--SVGGIRASLYNAISVEEVQKL 358 (370)
T ss_pred HHhcCCeEEcccchhhhhhcccceeecchH-----HHHHHHHHHHH-hhhhcccccc--ccccchhhhhccccHHHHHHH
Confidence 99876654 3434433 244455554322 13456666544 4554444432 2367999984 688999999
Q ss_pred HHHHHHHHHHh
Q 014631 407 LGRIKAFCQRH 417 (421)
Q Consensus 407 ~~~l~~~~~~~ 417 (421)
++-++++.+++
T Consensus 359 ~~~m~~F~k~h 369 (370)
T KOG2790|consen 359 AAFMKEFQKKH 369 (370)
T ss_pred HHHHHHHHHhc
Confidence 99888887654
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.57 E-value=0.00072 Score=58.09 Aligned_cols=155 Identities=15% Similarity=0.167 Sum_probs=83.9
Q ss_pred CCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCCe-EEEcCCCCcchHHHHhhcCceeEeeeccCCCC-ccCCHHHHHhh
Q 014631 103 LPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGAN-ILLPKPGFPLYEANARHTRLEIRHFDLLPEKG-WEVDLDGLEAL 178 (421)
Q Consensus 103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd~-Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~-~~~d~e~l~~~ 178 (421)
.|...-...+++--.+-.++.+.+..+. +|.-+ |+...-.-.+.....-..|.+++.+.-..+.+ .--|++.+++.
T Consensus 70 ~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~~ 149 (432)
T KOG3843|consen 70 AGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEAI 149 (432)
T ss_pred hhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHHH
Confidence 3434444444443334445555555553 34433 44343333344444556788877765433332 33478888877
Q ss_pred hcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEccccccc
Q 014631 179 ADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRW 256 (421)
Q Consensus 179 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~ 256 (421)
+.+ +...|+........=..-+++.+++|..+|..|++.-|+..+|+.-. .+....+.....-++ ..++.|+-|.|
T Consensus 150 iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqs--ee~i~~iaa~~~~grida~vqsldknf 227 (432)
T KOG3843|consen 150 IEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS--EECIHKIAAAAECGRIDAFVQSLDKNF 227 (432)
T ss_pred HHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccch--HHHHHHHHHHhhhccHHHHHHHhhhcc
Confidence 754 23334332222111122356889999999999999999999998632 111111111111111 14567999999
Q ss_pred CCC
Q 014631 257 IVP 259 (421)
Q Consensus 257 ~~~ 259 (421)
..|
T Consensus 228 ~vp 230 (432)
T KOG3843|consen 228 MVP 230 (432)
T ss_pred eee
Confidence 776
No 395
>PLN02672 methionine S-methyltransferase
Probab=96.64 E-value=0.088 Score=55.95 Aligned_cols=230 Identities=13% Similarity=0.133 Sum_probs=132.9
Q ss_pred hhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhh
Q 014631 22 TATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNS 101 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~ 101 (421)
..|++++.+++.++.- .+.-.+-+||+.-+-+... ...| ....+...+......-|.++.|-..+|..||.|+..
T Consensus 367 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (1082)
T PLN02672 367 RQPNQVKTIFKFLKNG--FHEVSGSLDLSFEDESVAD--EKIP-FLAYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRI 441 (1082)
T ss_pred cCchHHHHHHHHHHcc--chhhhhhccccccccccch--hhcc-HHHHHHHHHccCCCCCCCCCccchHHHHHHHHHHHH
Confidence 3467777777665521 1223345677655433210 1111 345666677766667888999999999999999999
Q ss_pred hCCCCCCCCcEEEcCCHHHHHHHHHHHhc------CCCCeEEEcCCCCcchHHHHhhcC--------ceeEeeeccCCCC
Q 014631 102 ELPCKLSPDDVYLTAGCKQAIQVILTVLA------RPGANILLPKPGFPLYEANARHTR--------LEIRHFDLLPEKG 167 (421)
Q Consensus 102 ~~~~~~~~~~i~~~~g~~~al~~~~~~l~------~~gd~Vl~~~p~y~~~~~~~~~~g--------~~~~~~~~~~~~~ 167 (421)
..+++.++++|++.++-..|+..+++.+. ..+.+-.++ .-|.......| ..+..+..+.
T Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 514 (1082)
T PLN02672 442 YHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP----KKWLTSLAIENATSDSKSDDVITVIEAPR--- 514 (1082)
T ss_pred hcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC----HHHHhHhhhhcccccCccCCeEEEEeCCC---
Confidence 99999999999999999999998887763 122111111 11222222222 2222222111
Q ss_pred ccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCC---
Q 014631 168 WEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGS--- 242 (421)
Q Consensus 168 ~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~--- 242 (421)
..+.+.+++++ ++++++..-... -..+..-.+.|.+.+++.|..++.|..-.. +........-+..+..
T Consensus 515 ---~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 588 (1082)
T PLN02672 515 ---QSDLVIELIKKLKPQVVVTGMADF---EMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPGSNGVLKYLAGHPL 588 (1082)
T ss_pred ---cchHHHHHHHhCCCeEEEEeccch---hhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCCcccHHHHhcCCCC
Confidence 11234444433 344443222222 122336689999999999999999976332 2211111111111111
Q ss_pred CCCEEEEcccccccCCCCceEEEEEee
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
..+..++..+-|.-..+.+.+.+++.-
T Consensus 589 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (1082)
T PLN02672 589 PSHAAIICGLVKNQVYSDLEVAFVISE 615 (1082)
T ss_pred CcchhHhhhhhhccccccceEEEEecC
Confidence 123455667888877899999999864
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=90.45 E-value=21 Score=35.84 Aligned_cols=244 Identities=11% Similarity=0.132 Sum_probs=123.8
Q ss_pred CCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHH
Q 014631 131 RPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIA 208 (421)
Q Consensus 131 ~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~ 208 (421)
.++.++++...+|+-.....+.. +.++.. .+ .|+++.... .++...+++--|.. -|.+. +..+++
T Consensus 203 ~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v-~~-------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~---d~~el~ 269 (1001)
T KOG2040|consen 203 NKRKKFVVDSNCHPQTLSVVKTRAKGFGIKV-VV-------SDIKEADYS-SKDVSGVLVQYPDT-EGSVL---DFDELV 269 (1001)
T ss_pred cccceEEecCCCCcchhhhhhccccccceeE-Ee-------cCHHHhhcc-ccceeEEEEEcCCC-CCccc---CHHHHH
Confidence 45667999999998776666521 222221 11 233333222 23455666666654 67774 567777
Q ss_pred HHHHhcCcEEEEcc-cccccccCCCCcccccccCCCCCEEEEcccccccCCC----CceEEEE--------------Eee
Q 014631 209 EKARKLGIMVISDE-VYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP----GWRLGWL--------------VTS 269 (421)
Q Consensus 209 ~~~~~~~~~li~De-~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~--------------~~~ 269 (421)
+.++..|.+++.-. --+.-. ..+-..++. .|.++|...+ |.| |.-.|+. ++-
T Consensus 270 ~~a~~~~s~vv~atDLLaLti-----LrpPgefGa---DIavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGv 340 (1001)
T KOG2040|consen 270 ELAHANGSLVVMATDLLALTI-----LRPPGEFGA---DIAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRIIGV 340 (1001)
T ss_pred HHhhccCceEEEeehhhHHHc-----cCChhhcCc---eeeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceEee
Confidence 88888888766421 111100 111122332 3667765444 443 1111111 111
Q ss_pred CCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhc-----cchhHHHHHHHHHHHHHHHHHHHhhcCCCccc
Q 014631 270 DPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKN-----TKEDFFSKIVDILRDTADICYDRIKEIPCITC 340 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~ 340 (421)
..+.. .+..+.-.++.. +.--.+.|.....|+.+-+.. ....+++++.++.....-.+...|++. |-++
T Consensus 341 tkD~~-gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel 418 (1001)
T KOG2040|consen 341 TKDAL-GKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHEL 418 (1001)
T ss_pred eeccc-ccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhh
Confidence 00000 011122222111 110112333333333222221 235788999999999999999999875 5553
Q ss_pred cCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631 341 PRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
. ...+|-.+++.... ...++..+.+ +++|-++-- ..+.+-+++- ++.+|++.++..+.
T Consensus 419 ~---~k~fFDTLkI~~~~-----s~~~~l~rA~-~~~iNlr~~----ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 419 Q---HKPFFDTLKIRCGC-----SAEEVLDRAA-KRQINLRLV----EDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred c---cccccceEEEEecC-----cHHHHHHHHH-hhcCceEEe----ecCceEEeecccccHHHHHHHHHHHc
Confidence 3 22367666665431 3556666554 445655421 2466778886 67889999888765
No 397
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=88.04 E-value=5.9 Score=33.92 Aligned_cols=99 Identities=21% Similarity=0.341 Sum_probs=64.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEE-----EcC---------CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANIL-----LPK---------PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl-----~~~---------p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
-+.+-+||-.++.++..++ +.|..|. .+. |...-....++..|.++......-+ ..-..+++.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~-~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~--~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLAL-EEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE--EEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHH-HcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc--chhhHHHHH
Confidence 3677889888888877666 3443221 111 1111224556677888777765431 223567776
Q ss_pred hhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 177 ALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 177 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
+++.. +..+|+ +|.+++..+...+-.+|++.|+.++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 66643 334554 8999999999999999999998765
No 398
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=80.75 E-value=43 Score=30.21 Aligned_cols=105 Identities=16% Similarity=0.200 Sum_probs=63.3
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCC--eEEEc--CCCCcchHHHHh--hcCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGA--NILLP--KPGFPLYEANAR--HTRLEIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd--~Vl~~--~p~y~~~~~~~~--~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
-..+|++|.|.+..+..++....++|+ .|++. .|.+.++..+.. ..|++...++ |. ++-+....
T Consensus 161 hsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p~~qgH~~Ak~la~~giettVI~---------da-aVfA~Msr 230 (353)
T KOG1465|consen 161 HSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAPNNQGHELAKPLAQAGIETTVIP---------DA-AVFAMMSR 230 (353)
T ss_pred ccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCCcccchHhhHHHHHcCCeeEEec---------cH-HHHHHhhh
Confidence 456899999988888887777666664 34454 355554333222 3456554443 22 33343333
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 222 (421)
-.|+|+-+..--+-|-+..+.-...++..|++|-..+|+=.
T Consensus 231 VnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~VlA 271 (353)
T KOG1465|consen 231 VNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVIVLA 271 (353)
T ss_pred cceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEEEec
Confidence 34555555544444556566677888889999988877643
No 399
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=80.10 E-value=28 Score=33.59 Aligned_cols=132 Identities=16% Similarity=0.166 Sum_probs=74.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCC-----------CCCCCcEEEcCCHHHHHHHHHHHhcCCC---CeEEEc-CCCCcch--H
Q 014631 85 SVGILPARRAIADYLNSELPC-----------KLSPDDVYLTAGCKQAIQVILTVLARPG---ANILLP-KPGFPLY--E 147 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~-----------~~~~~~i~~~~g~~~al~~~~~~l~~~g---d~Vl~~-~p~y~~~--~ 147 (421)
..+-.+|.+.|-+|+...... .+...++++|-|.+..++.++....+.| ..|+++ .|..-+- .
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~l 403 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLL 403 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHH
Confidence 334456666666666554332 2345577777777767666654433333 233343 3444442 2
Q ss_pred HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE-Ecccccc
Q 014631 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI-SDEVYDH 226 (421)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~~~~ 226 (421)
.-+...|++..|+-++. ++. ...+-+++++=++.--.-|.+|+..--..++-+++.||+.+| +=|+|-+
T Consensus 404 r~Lv~~GinctYv~I~a-----~sy-----im~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yKF 473 (556)
T KOG1467|consen 404 RRLVDRGINCTYVLINA-----ASY-----IMLEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYKF 473 (556)
T ss_pred HHHHHcCCCeEEEEehh-----HHH-----HHHhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhhh
Confidence 33345677777765431 111 111224444333443456888888888889999999999766 4566654
No 400
>PRK10595 SOS cell division inhibitor; Provisional
Probab=76.16 E-value=42 Score=27.52 Aligned_cols=101 Identities=13% Similarity=0.125 Sum_probs=61.7
Q ss_pred cEEEc---CCHHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631 111 DVYLT---AGCKQAIQVILTVL---ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV 184 (421)
Q Consensus 111 ~i~~~---~g~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~ 184 (421)
+|++. +|-.+ + ++...| ...+..|+...|-+..+.......|.....+-.....+-.-.+...|++++.+..
T Consensus 30 Ell~~~~qpg~~e-~-LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~ 107 (164)
T PRK10595 30 ELVYREDQPMMTQ-L-LLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNY 107 (164)
T ss_pred EEeecCCCchHHH-H-HHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCC
Confidence 56664 33333 2 444443 4566788888888988999999999875443322111111245677888887776
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
..++....+ .++.+++++|--.|.+-+.+
T Consensus 108 ~aVL~Wlp~----~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 108 SVVLGWLPD----ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred cEEEECCcc----cCCHHHHHHHHHHHHhCCCE
Confidence 676766421 24557788887767665543
No 401
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=75.52 E-value=19 Score=33.18 Aligned_cols=106 Identities=18% Similarity=0.201 Sum_probs=67.7
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcC-CCCcc-h----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 117 GCKQAIQVILTVLARPGANILLPK-PGFPL-Y----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~-~----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
|=|..+.-++..+.+.|.+|++.. -+|-+ . ...++..|.+++.-+ .-.+.-.+-.+.++.+...+..++++-.
T Consensus 151 GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~-~G~DpAaVafDAi~~Akar~~DvvliDT 229 (340)
T COG0552 151 GKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK-EGADPAAVAFDAIQAAKARGIDVVLIDT 229 (340)
T ss_pred chHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC-CCCCcHHHHHHHHHHHHHcCCCEEEEeC
Confidence 347778888888888898877754 33422 1 223355676665532 1111112345667777666777766554
Q ss_pred C---CCCcccccCHHHHHHHHHHHHhcC------cEEEEcccccc
Q 014631 191 P---GNPCGNVFTYQQLQKIAEKARKLG------IMVISDEVYDH 226 (421)
Q Consensus 191 p---~nptG~~~~~~~l~~i~~~~~~~~------~~li~De~~~~ 226 (421)
. ||-+... ++|++|.+++++.. ++++.|..-+-
T Consensus 230 AGRLhnk~nLM---~EL~KI~rV~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 230 AGRLHNKKNLM---DELKKIVRVIKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred cccccCchhHH---HHHHHHHHHhccccCCCCceEEEEEEcccCh
Confidence 4 7878777 99999999999865 56666876543
No 402
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=75.22 E-value=22 Score=30.96 Aligned_cols=91 Identities=16% Similarity=0.145 Sum_probs=48.9
Q ss_pred CHHHHHHHHHHHhcCCCCeEEE-cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 117 GCKQAIQVILTVLARPGANILL-PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~-~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
.|..+-.. ++.|.+++-.|.+ ..+.-......++..|++++.... -|.+.|.++++ +...++++.+.+..
T Consensus 7 tG~~G~~v-~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~-g~d~v~~~~~~~~~ 77 (233)
T PF05368_consen 7 TGNQGRSV-VRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALK-GVDAVFSVTPPSHP 77 (233)
T ss_dssp TSHHHHHH-HHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHT-TCSEEEEESSCSCC
T ss_pred ccHHHHHH-HHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHc-CCceEEeecCcchh
Confidence 34555443 3444446644433 333322223445567887664432 17889988887 45555555553322
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEE
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.. .+.-..+++.|++.|+-.+
T Consensus 78 ~~---~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 78 SE---LEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp CH---HHHHHHHHHHHHHHT-SEE
T ss_pred hh---hhhhhhHHHhhhccccceE
Confidence 22 2567889999999887444
No 403
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=74.44 E-value=34 Score=31.26 Aligned_cols=58 Identities=21% Similarity=0.249 Sum_probs=38.3
Q ss_pred CccCCHHHHHhhhc---c--CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 167 GWEVDLDGLEALAD---E--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 167 ~~~~d~e~l~~~~~---~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
+..++.+++++.++ . ....+++.+.+=|.|.. .+...+|.++|++.|..++.|..-..
T Consensus 108 Gp~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~--~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 108 GPEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVP--PDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred CCCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCC--HHHHHHHHHHHHhcCCeEEEECChHH
Confidence 33456666555332 1 12233555666666654 58899999999999999999976544
No 404
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=70.30 E-value=51 Score=30.88 Aligned_cols=125 Identities=12% Similarity=0.116 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHHHHHHHHhcCCCCeE--EEcCCCCcc------hHHHHhhcCceeEe
Q 014631 89 LPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAIQVILTVLARPGANI--LLPKPGFPL------YEANARHTRLEIRH 159 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al~~~~~~l~~~gd~V--l~~~p~y~~------~~~~~~~~g~~~~~ 159 (421)
.+|++.+.++-.. +-+ .+-++..+||-.+..++..+...-|..+ +..++.+.+ ....++..|.....
T Consensus 43 ~~l~~l~~~~k~~----~~~~yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~ 118 (343)
T TIGR03573 43 KELEELVDKIKKK----GGGRYDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHT 118 (343)
T ss_pred HHHHHHHHHHHhc----CCCCCCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEE
Confidence 4555555554322 111 4567778998777776543322234333 345666642 34455667877766
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS 231 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 231 (421)
+.+ +.+.+.+....... -..+|..++.. .....+.++|+++|+.+|+.....+-.++|
T Consensus 119 i~~--------d~~~~~~l~~~~~~--~~~~pc~~c~~----~~~~~l~~~A~~~gi~~Il~G~~~dE~fgG 176 (343)
T TIGR03573 119 ITI--------NPETFRKLQRAYFK--KVGDPEWPQDH----AIFASVYQVALKFNIPLIIWGENIAEEYGG 176 (343)
T ss_pred EeC--------CHHHHHHHHHHHHh--ccCCCchhhhh----HHHHHHHHHHHHhCCCEEEeCCCHHHhcCC
Confidence 653 44444433321111 11223222222 346778889999999999887665544433
No 405
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=70.29 E-value=6.1 Score=39.75 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=32.9
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST 232 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 232 (421)
+-.|++..|. +++++++++-|+++||-||.|=+|..+.-++.
T Consensus 203 ~yAp~sryGt---Pedfk~fVD~aH~~GIgViLD~V~~HF~~d~~ 244 (628)
T COG0296 203 YYAPTSRYGT---PEDFKALVDAAHQAGIGVILDWVPNHFPPDGN 244 (628)
T ss_pred eccccccCCC---HHHHHHHHHHHHHcCCEEEEEecCCcCCCCcc
Confidence 3344444454 49999999999999999999999998765443
No 406
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=70.23 E-value=60 Score=26.69 Aligned_cols=103 Identities=14% Similarity=0.109 Sum_probs=62.5
Q ss_pred CcEEEcCCHHHHHH-HHHHHh---cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 110 DDVYLTAGCKQAIQ-VILTVL---ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 110 ~~i~~~~g~~~al~-~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
.+|++......... +++..| ...+..|+...|-+..+.......|.+...+-......-.-.++..|++++.++..
T Consensus 33 sEl~~~~~~pg~~elLLlP~L~~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~ 112 (168)
T TIGR00623 33 SEVVYREDQPMMAQLLLLPLLQQLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYS 112 (168)
T ss_pred eEEeecCCCchhHHHHHHHHHHHhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCc
Confidence 35666543222222 344443 45667788888888888888888998754442211111112467889999887777
Q ss_pred EEEeC-CCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631 186 MVIVN-PGNPCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 186 i~~~~-p~nptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
.+++. |+. ++.+++++|--.+..-+.+
T Consensus 113 aVL~WLp~~-----l~~~~lRRLqlAA~~G~al 140 (168)
T TIGR00623 113 VVIGWLTDE-----LTEEEHAKLVRAAEEGNAM 140 (168)
T ss_pred EEEecCCcc-----CCHHHHHHHHHHHHhCCCe
Confidence 77766 433 5557788887767665543
No 407
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=69.98 E-value=11 Score=35.10 Aligned_cols=67 Identities=19% Similarity=0.377 Sum_probs=43.9
Q ss_pred HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 149 NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.....+.+.....+.++.+|.+.++...++-..... .....+.|-.++.+++++|++.|+++|+-||
T Consensus 26 ~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vI 92 (329)
T cd06568 26 LLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVV 92 (329)
T ss_pred HHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 334556777777776666776655554433221111 1122355678999999999999999999888
No 408
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=69.31 E-value=36 Score=30.94 Aligned_cols=142 Identities=18% Similarity=0.219 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 64 PVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
....+.+.+.+....... |....+..+.-..+++.+. ...-+++++.|+..+..+ .+.+... -.|+
T Consensus 14 ~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~------~~~~DlIi~~gt~aa~~~-~~~~~~~-iPVV 85 (294)
T PF04392_consen 14 DDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLK------AQKPDLIIAIGTPAAQAL-AKHLKDD-IPVV 85 (294)
T ss_dssp HHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHC------CTS-SEEEEESHHHHHHH-HHH-SS--S-EE
T ss_pred HHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHh------cCCCCEEEEeCcHHHHHH-HHhcCCC-cEEE
Confidence 445555666665432222 2233455555555555552 234468888887766554 3444321 2343
Q ss_pred Ec---CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LP---KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
.. +|...+........|.++..+.- .....-.++.+.+.+..-.++.++.+++.+++ ....+.+.+.++++
T Consensus 86 f~~V~dp~~~~l~~~~~~~~~nvTGv~~--~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~~ 159 (294)
T PF04392_consen 86 FCGVSDPVGAGLVDSLDRPGKNVTGVSE--RPPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKKL 159 (294)
T ss_dssp EECES-TTTTTS-S-SSS--SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHHT
T ss_pred EEeccChhhhhccccccCCCCCEEEEEC--CcCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHHc
Confidence 32 45544443333333334444431 11111123333333332234446677775533 24577888888899
Q ss_pred CcEEE
Q 014631 215 GIMVI 219 (421)
Q Consensus 215 ~~~li 219 (421)
|+-++
T Consensus 160 g~~l~ 164 (294)
T PF04392_consen 160 GIELV 164 (294)
T ss_dssp T-EEE
T ss_pred CCEEE
Confidence 98765
No 409
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=68.09 E-value=12 Score=34.26 Aligned_cols=66 Identities=29% Similarity=0.528 Sum_probs=43.4
Q ss_pred HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 149 NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.....+.+.....+.++.+|.+..+...++-..... .++ .+.|-.++.+++++|++.|+++|+-||
T Consensus 24 ~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~vi 89 (303)
T cd02742 24 VLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVI 89 (303)
T ss_pred HHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEE
Confidence 334567777777776666776665554443322111 111 244568999999999999999999888
No 410
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=67.05 E-value=25 Score=31.94 Aligned_cols=50 Identities=12% Similarity=0.137 Sum_probs=35.1
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-++.++++...+.+.+++.+-..+ .++-++|.++|+++|+.++==.+.+.
T Consensus 78 v~~~l~e~~~~gvk~avI~s~Gf~------~~~~~~l~~~a~~~girvlGPNc~Gi 127 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEGIP------VLDMLEVKAYLERKKTRLIGPNCPGI 127 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCEEECCCCCcc
Confidence 467778888778887666554332 35456899999999999985544443
No 411
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=64.69 E-value=93 Score=27.07 Aligned_cols=98 Identities=20% Similarity=0.301 Sum_probs=60.2
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEE----cCC--C--Cc-----chHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILL----PKP--G--FP-----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~----~~p--~--y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++..+||-.+..++..++.+ -+.+.+ +.. . |+ -....++..|.+.+.++.... ..--.+++.+.
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 45678888888888877765 432222 111 1 11 123556778888766554222 11234555555
Q ss_pred hcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 179 ADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 179 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
+++ +..+++ +|-+.+...+..+-.+|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 543 444553 8989888889999999999887655
No 412
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=63.65 E-value=14 Score=34.69 Aligned_cols=60 Identities=22% Similarity=0.381 Sum_probs=41.4
Q ss_pred hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
...+.+.....+.++.+|.+.++.+.++.... ....|-.++.+++++|++.|+++|+-||
T Consensus 28 a~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vI 87 (348)
T cd06562 28 AYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVI 87 (348)
T ss_pred HHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEE
Confidence 44566666677766667766655544432211 1234677899999999999999999888
No 413
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=62.16 E-value=17 Score=33.41 Aligned_cols=58 Identities=22% Similarity=0.453 Sum_probs=38.1
Q ss_pred hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
...+.++-...+.++.+|.+..+...++.... ..|-.++.+++++|++.|+++|+-||
T Consensus 28 a~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 28 ASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 44566666666655556655544333221111 13556999999999999999999888
No 414
>PRK04296 thymidine kinase; Provisional
Probab=60.88 E-value=60 Score=27.32 Aligned_cols=97 Identities=18% Similarity=0.167 Sum_probs=55.3
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCc---chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFP---LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVNP 191 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~p 191 (421)
+|.++..+.+.. ..|.+|++..|... +....+...|.++..+.. ...+++.+.+. .+..+|++-..
T Consensus 16 TT~~l~~~~~~~-~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEa 87 (190)
T PRK04296 16 STELLQRAYNYE-ERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEA 87 (190)
T ss_pred HHHHHHHHHHHH-HcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEcc
Confidence 456666655554 45778887766322 233344555543322211 12233333322 24566777766
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
+. ++.+++.++.+.++..|+.+|+=.-...+
T Consensus 88 q~-----l~~~~v~~l~~~l~~~g~~vi~tgl~~~~ 118 (190)
T PRK04296 88 QF-----LDKEQVVQLAEVLDDLGIPVICYGLDTDF 118 (190)
T ss_pred cc-----CCHHHHHHHHHHHHHcCCeEEEEecCccc
Confidence 53 56677888999988899888876555553
No 415
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=59.58 E-value=42 Score=31.01 Aligned_cols=76 Identities=11% Similarity=0.176 Sum_probs=49.8
Q ss_pred CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 140 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.-.|.+|...++....++++++.... ...|.+-.++. +.|-|++--| ..++.++.++|++.|+++|+.+
T Consensus 58 ~k~y~syEeLakd~~vDvVyi~~~~~----qH~evv~l~l~-~~K~VL~EKP-----la~n~~e~~~iveaA~~rgv~~- 126 (351)
T KOG2741|consen 58 PKAYGSYEELAKDPEVDVVYISTPNP----QHYEVVMLALN-KGKHVLCEKP-----LAMNVAEAEEIVEAAEARGVFF- 126 (351)
T ss_pred CccccCHHHHhcCCCcCEEEeCCCCc----cHHHHHHHHHH-cCCcEEeccc-----ccCCHHHHHHHHHHHHHcCcEE-
Confidence 34688999999999999999886432 23333333333 2334554444 2356699999999999999544
Q ss_pred Ecccccc
Q 014631 220 SDEVYDH 226 (421)
Q Consensus 220 ~De~~~~ 226 (421)
.|..+..
T Consensus 127 meg~~~R 133 (351)
T KOG2741|consen 127 MEGLWWR 133 (351)
T ss_pred Eeeeeee
Confidence 4655544
No 416
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=59.58 E-value=70 Score=27.70 Aligned_cols=98 Identities=18% Similarity=0.235 Sum_probs=53.0
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeE----EEc-CC---CCcc-----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANI----LLP-KP---GFPL-----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~V----l~~-~p---~y~~-----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+++-+||-.+..++.+++.+ .+.+ +++ .. -|++ ....+...|.+.+.++...+.. --.+++.+.
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~~--~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDEE--DYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---CC--CHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCccc--hhhHHHHHH
Confidence 56678888888888777765 3321 111 11 1222 2556678899888877652221 235666666
Q ss_pred hcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 179 ADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 179 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
++. +..+++ +|-+.+...+..+-++|.+.|+-.+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 643 334443 8888888888889999999987665
No 417
>PRK13125 trpA tryptophan synthase subunit alpha; Provisional
Probab=58.85 E-value=94 Score=27.41 Aligned_cols=85 Identities=13% Similarity=0.109 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCC-----C-cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 121 AIQVILTVLARPG-ANILLPKPG-----F-PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 121 al~~~~~~l~~~g-d~Vl~~~p~-----y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
.....+..+.+.| |.|++++-- + ..+...++..|.++... +.+. -+.+.++..+......+++ +.++
T Consensus 89 ~~~~~i~~~~~~Gadgvii~dlp~e~~~~~~~~~~~~~~~Gl~~~~~-v~p~----T~~e~l~~~~~~~~~~l~m-sv~~ 162 (244)
T PRK13125 89 SLDNFLNMARDVGADGVLFPDLLIDYPDDLEKYVEIIKNKGLKPVFF-TSPK----FPDLLIHRLSKLSPLFIYY-GLRP 162 (244)
T ss_pred CHHHHHHHHHHcCCCEEEECCCCCCcHHHHHHHHHHHHHcCCCEEEE-ECCC----CCHHHHHHHHHhCCCEEEE-EeCC
Confidence 3444444455555 778776421 1 13456667788876544 2332 2566777766544444444 5566
Q ss_pred CcccccCHHHHHHHHHHH
Q 014631 194 PCGNVFTYQQLQKIAEKA 211 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~ 211 (421)
.||..++..-...+.++.
T Consensus 163 ~~g~~~~~~~~~~i~~lr 180 (244)
T PRK13125 163 ATGVPLPVSVERNIKRVR 180 (244)
T ss_pred CCCCCchHHHHHHHHHHH
Confidence 667665543333444333
No 418
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=58.12 E-value=66 Score=26.46 Aligned_cols=89 Identities=18% Similarity=0.144 Sum_probs=47.6
Q ss_pred EEEcCC-HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 112 VYLTAG-CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 112 i~~~~g-~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
|+++.+ |.-+-. +++.|++.|-+|....-.-..... ..+.++ +..+. .|.+.+.+++. +...++.+.
T Consensus 1 I~V~GatG~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~--~~~d~-----~d~~~~~~al~-~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRA-LAKQLLRRGHEVTALVRSPSKAED---SPGVEI--IQGDL-----FDPDSVKAALK-GADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTSEEEEEESSGGGHHH---CTTEEE--EESCT-----TCHHHHHHHHT-TSSEEEECC
T ss_pred eEEECCCChHHHH-HHHHHHHCCCEEEEEecCchhccc---cccccc--ceeee-----hhhhhhhhhhh-hcchhhhhh
Confidence 344443 343443 455555666555554333222222 344443 43332 37788888887 455555554
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
+.++. .....+.+.+.|+++|+
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 43333 24668888888888664
No 419
>PRK08265 short chain dehydrogenase; Provisional
Probab=57.08 E-value=1.1e+02 Score=26.98 Aligned_cols=55 Identities=15% Similarity=0.012 Sum_probs=30.2
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.++..++.+.
T Consensus 7 k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl 61 (261)
T PRK08265 7 KVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDI 61 (261)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecC
Confidence 4566666555444445556667888877765433223333444455566665543
No 420
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=56.53 E-value=1.6e+02 Score=26.90 Aligned_cols=107 Identities=17% Similarity=0.211 Sum_probs=60.5
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCC--eEEEc--CCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGA--NILLP--KPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd--~Vl~~--~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
...++++|.+-+.++..++....+.|. +|++. .|.+.+. ....+..|.++..+. |. ++-..++
T Consensus 118 ~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------Ds-a~~~~~~- 186 (301)
T COG1184 118 HDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------DS-AVGAFMS- 186 (301)
T ss_pred cCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------ch-HHHHHHH-
Confidence 466899999988888888877777775 55554 4777654 333455676665553 11 1222222
Q ss_pred CceEEEEe-CCCCCcccccCHHHHHHHHHHHHhcCcEEE-Eccccc
Q 014631 182 NTVAMVIV-NPGNPCGNVFTYQQLQKIAEKARKLGIMVI-SDEVYD 225 (421)
Q Consensus 182 ~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~~~ 225 (421)
+...+++. ..--..|..++.---..|+..|++++..++ +=|.|-
T Consensus 187 ~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v~aesyK 232 (301)
T COG1184 187 RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYVVAESYK 232 (301)
T ss_pred hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEEEeeeec
Confidence 22223222 111233444444445567888899998655 444554
No 421
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=56.21 E-value=1e+02 Score=26.18 Aligned_cols=41 Identities=22% Similarity=0.308 Sum_probs=26.6
Q ss_pred HHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 174 GLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 174 ~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
.++...+++..+++++. +|.. +.+.++++.++++|+.+|.=
T Consensus 102 ql~~~~~~gDvli~iS~----SG~s---~~v~~a~~~Ak~~G~~vI~I 142 (196)
T PRK10886 102 QVRALGHAGDVLLAIST----RGNS---RDIVKAVEAAVTRDMTIVAL 142 (196)
T ss_pred HHHHcCCCCCEEEEEeC----CCCC---HHHHHHHHHHHHCCCEEEEE
Confidence 33444444444444443 3333 77999999999999998853
No 422
>PLN02591 tryptophan synthase
Probab=55.69 E-value=1.4e+02 Score=26.46 Aligned_cols=158 Identities=15% Similarity=0.238 Sum_probs=89.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC-C--H
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA-G--C 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~-g--~ 118 (421)
.|.+++-+++--.+... ==|.++++..+++.++.. +..+-+.+.+.- +.. .. | -|+++- + -
T Consensus 28 ~Gad~iElGiPfSDP~a---DGpvIq~a~~rAL~~G~~--------~~~~~~~~~~~r-~~~--~~-p-~ilm~Y~N~i~ 91 (250)
T PLN02591 28 CGADVIELGVPYSDPLA---DGPVIQAAATRALEKGTT--------LDSVISMLKEVA-PQL--SC-P-IVLFTYYNPIL 91 (250)
T ss_pred CCCCEEEECCCCCCCcc---cCHHHHHHHHHHHHcCCC--------HHHHHHHHHHHh-cCC--CC-C-EEEEecccHHH
Confidence 38899888776433111 136778888888776421 233334443332 111 11 1 133331 2 1
Q ss_pred HHHHHHHHHHhcCCC-CeEEEcCCCCc---chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPG-ANILLPKPGFP---LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
..++..++..+.+.| |.|++++--+- .+...++..|...+.+=. ++ .+.+.+++........|.+.+-...
T Consensus 92 ~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~-Pt----t~~~ri~~ia~~~~gFIY~Vs~~Gv 166 (250)
T PLN02591 92 KRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT-PT----TPTERMKAIAEASEGFVYLVSSTGV 166 (250)
T ss_pred HhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CCHHHHHHHHHhCCCcEEEeeCCCC
Confidence 336666677777777 89999986553 345666778877766532 22 2345566655545556666666667
Q ss_pred cccccC-HHHHHHHHHHHHhc-CcEEEE
Q 014631 195 CGNVFT-YQQLQKIAEKARKL-GIMVIS 220 (421)
Q Consensus 195 tG~~~~-~~~l~~i~~~~~~~-~~~li~ 220 (421)
||..-. +++++++++.++++ ++.+++
T Consensus 167 TG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 167 TGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred cCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 776322 46678877777764 555553
No 423
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=55.28 E-value=53 Score=29.85 Aligned_cols=50 Identities=14% Similarity=0.165 Sum_probs=34.4
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-++.++++...+.+.+++..... +..+-++|.++|+++|+.++==.+.+.
T Consensus 76 v~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~girilGPNc~Gi 125 (286)
T TIGR01019 76 AADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRLIGPNCPGI 125 (286)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEECCCCceE
Confidence 46777777777888776655443 222357899999999999985444443
No 424
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=55.22 E-value=1e+02 Score=26.81 Aligned_cols=98 Identities=21% Similarity=0.228 Sum_probs=58.9
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEE--EcCCC------Cc-----chHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANIL--LPKPG------FP-----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl--~~~p~------y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++..+||-.+..++..++.+ .+.+. +..|. ++ -....++..|.+...+....+ ..-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45668888777777766654 43221 11121 22 124556778888766654321 11234455444
Q ss_pred hcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 179 ADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 179 ~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
+.+ +..+++ +|.+.+..+...+-++|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 433 445554 8999898899999999999887654
No 425
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=54.27 E-value=47 Score=26.25 Aligned_cols=58 Identities=29% Similarity=0.411 Sum_probs=39.7
Q ss_pred cCCHHHHHhhhcc-CceEEEEeCCCCCcccccC-HHHHHHHHHHHHh-c-CcE-EEEcccccc
Q 014631 169 EVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT-YQQLQKIAEKARK-L-GIM-VISDEVYDH 226 (421)
Q Consensus 169 ~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~-~-~~~-li~De~~~~ 226 (421)
..+.+.|.+.+.+ ++..+++..|-|..|..-+ ....+++++..++ . ++. ..+||-++.
T Consensus 37 ~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 4688999988865 5778889999777666422 2455666655554 3 775 458998875
No 426
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=53.84 E-value=1.2e+02 Score=29.65 Aligned_cols=57 Identities=18% Similarity=0.263 Sum_probs=37.0
Q ss_pred CHHHHHhhhccCceEEEEeCCCC-CcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGN-PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
-++.++++...+.+.+++..-.. .+|.- ..+.-+++.++|+++|+.++--.+.+.+.
T Consensus 77 ~~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~ 134 (447)
T TIGR02717 77 VPQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIIN 134 (447)
T ss_pred HHHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEec
Confidence 45666777777777775544332 34421 11223789999999999999887766554
No 427
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=52.98 E-value=1.9e+02 Score=27.07 Aligned_cols=49 Identities=20% Similarity=0.163 Sum_probs=29.8
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCccc----ccCHHHHHHHHHHHHhcCcEEEE
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGN----VFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~----~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
|.+++.+.++.-.. .+=.-|-||+|. ..+.++++++.++.+++|+.+.+
T Consensus 268 da~~La~llk~l~~-~VnLiPyn~~~~~~~~~ps~e~l~~f~~~l~~~gi~v~i 320 (342)
T PRK14454 268 DAKELGKLLKGMLC-HVNLIPVNEVKENGFKKSSKEKIKKFKNILKKNGIETTI 320 (342)
T ss_pred HHHHHHHHHhcCCc-eEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 44445555543211 111235566553 35778899999999999987665
No 428
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=52.07 E-value=1.5e+02 Score=25.32 Aligned_cols=96 Identities=20% Similarity=0.197 Sum_probs=55.3
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~ 187 (421)
....+++..||..|...+- .|++.|-.|.+.+|....-.......| ++..+.- . ...+.+. + ..++
T Consensus 8 ~gk~vlVvGgG~va~rk~~-~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl~-----~-~~lV 73 (205)
T TIGR01470 8 EGRAVLVVGGGDVALRKAR-LLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADILE-----G-AFLV 73 (205)
T ss_pred CCCeEEEECcCHHHHHHHH-HHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHhC-----C-cEEE
Confidence 4457888888888877754 555677777777776654332232233 3444331 1 1223331 2 3445
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEE-Ecccc
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI-SDEVY 224 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li-~De~~ 224 (421)
+..++++ +--+++...|++.++++- +|+..
T Consensus 74 i~at~d~-------~ln~~i~~~a~~~~ilvn~~d~~e 104 (205)
T TIGR01470 74 IAATDDE-------ELNRRVAHAARARGVPVNVVDDPE 104 (205)
T ss_pred EECCCCH-------HHHHHHHHHHHHcCCEEEECCCcc
Confidence 5555542 234678899999998773 55543
No 429
>PLN00191 enolase
Probab=51.67 E-value=83 Score=30.75 Aligned_cols=98 Identities=11% Similarity=0.126 Sum_probs=60.2
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcc-hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPL-YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
++.+++..+- .|.++-+-+.+++|.... +....+.... ..+|+--++.+.-+++.+++.+..+..-++..-++. .
T Consensus 296 s~~e~i~~~~-~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~--~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~q-i 371 (457)
T PLN00191 296 SGDELIDLYK-EFVSDYPIVSIEDPFDQDDWEHWAKLTSL--EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQ-I 371 (457)
T ss_pred CHHHHHHHHH-HHhhcCCcEEEECCCCcccHHHHHHHHcc--CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccc-c
Confidence 5556666544 444444678899998653 2333332222 223333333333468888888876655556666665 4
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
|.+ .+..+++++|+++|+.+++-
T Consensus 372 GGI---Tea~~~a~lA~~~G~~~~is 394 (457)
T PLN00191 372 GTV---TESIEAVKMSKAAGWGVMTS 394 (457)
T ss_pred CCH---HHHHHHHHHHHHCCCEEEeC
Confidence 555 57888999999999988764
No 430
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=50.55 E-value=1.5e+02 Score=27.05 Aligned_cols=98 Identities=17% Similarity=0.132 Sum_probs=52.9
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHH---hhhc
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLE---ALAD 180 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~---~~~~ 180 (421)
+..+-+++|.||...=..++.-+.+.|-++++.+-.=.+. ....+..| ++..+-.|-. +.|++. +.++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis-----~~eei~~~a~~Vk 109 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDIS-----DREEIYRLAKKVK 109 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCC-----CHHHHHHHHHHHH
Confidence 4455677777776655555555667887776655333333 33333335 5555555433 334443 3333
Q ss_pred c--CceEEEEeCCCC---CcccccCHHHHHHHHHH
Q 014631 181 E--NTVAMVIVNPGN---PCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 181 ~--~~~~i~~~~p~n---ptG~~~~~~~l~~i~~~ 210 (421)
+ +..-|+++|..= -....++.+++++..++
T Consensus 110 ~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 110 KEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred HhcCCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 3 334456666632 23344677888877664
No 431
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=50.47 E-value=1e+02 Score=27.84 Aligned_cols=98 Identities=13% Similarity=0.101 Sum_probs=56.1
Q ss_pred CHHHHHhhhcc-CceEEEEeCC-CCCcccccC--------HHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 171 DLDGLEALADE-NTVAMVIVNP-GNPCGNVFT--------YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 171 d~e~l~~~~~~-~~~~i~~~~p-~nptG~~~~--------~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
|.+.+.+.+++ ++.+|+-+.. ++.-...-. ..--+.++++|++.|+.+|. +..+++|+|....+...-
T Consensus 38 d~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh--iSTDyVFDG~~~~~Y~E~ 115 (281)
T COG1091 38 DPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH--ISTDYVFDGEKGGPYKET 115 (281)
T ss_pred ChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE--eecceEecCCCCCCCCCC
Confidence 67778777765 3566654444 333333222 22347789999999998885 344556677653343333
Q ss_pred CCCCCEEEEcccccccCC-------CC---ceEEEEEeeCC
Q 014631 241 GSTVPVITLGSMSKRWIV-------PG---WRLGWLVTSDP 271 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~-------~G---~r~G~~~~~~~ 271 (421)
|...+ +-+.+-||..|= +. +|.+|+++...
T Consensus 116 D~~~P-~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g 155 (281)
T COG1091 116 DTPNP-LNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYG 155 (281)
T ss_pred CCCCC-hhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCC
Confidence 33222 234466776431 11 57888888643
No 432
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=49.98 E-value=74 Score=24.72 Aligned_cols=48 Identities=13% Similarity=0.148 Sum_probs=37.9
Q ss_pred ccCCHHHHHhhhccCceEEEEeCC-----CCCcccccCHHHHHHHHHHHHhcC
Q 014631 168 WEVDLDGLEALADENTVAMVIVNP-----GNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p-----~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
..+|++.+.+++..+...|++..+ ++..|......+++.+.++..+.|
T Consensus 38 Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~G 90 (124)
T PF02662_consen 38 GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELG 90 (124)
T ss_pred CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcC
Confidence 358999999999888888877332 568898888888888888887766
No 433
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=47.87 E-value=1.1e+02 Score=27.23 Aligned_cols=153 Identities=13% Similarity=0.148 Sum_probs=82.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH--
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK-- 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-- 119 (421)
.|.+++-+++-..+.. -=-|.++++..++++++.. ...+-+.+.+.-.+. . .-.+++-+=..
T Consensus 36 ~GaD~iEiGiPfSDP~---ADGpvIq~A~~rAL~~G~~--------~~~~~~~~~~ir~~~----~-~~pivlm~Y~N~i 99 (259)
T PF00290_consen 36 AGADIIEIGIPFSDPV---ADGPVIQKASQRALKNGFT--------LEKIFELVKEIRKKE----P-DIPIVLMTYYNPI 99 (259)
T ss_dssp TTBSSEEEE--SSSCT---TSSHHHHHHHHHHHHTT----------HHHHHHHHHHHHHHC----T-SSEEEEEE-HHHH
T ss_pred cCCCEEEECCCCCCCC---CCCHHHHHHHHHHHHCCCC--------HHHHHHHHHHHhccC----C-CCCEEEEeeccHH
Confidence 3788888876643311 1136778888888776421 233333333332121 1 12243332222
Q ss_pred --HHHHHHHHHhcCCC-CeEEEcCCCCc---chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 120 --QAIQVILTVLARPG-ANILLPKPGFP---LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 120 --~al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
.++..++..+.+.| |.+++++--+- .+...+...|...+.+=. +. -+.+.+++........|++.+-..
T Consensus 100 ~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~-p~----t~~~Ri~~i~~~a~gFiY~vs~~G 174 (259)
T PF00290_consen 100 FQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVA-PT----TPEERIKKIAKQASGFIYLVSRMG 174 (259)
T ss_dssp HHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEE-TT----S-HHHHHHHHHH-SSEEEEESSSS
T ss_pred hccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEEC-CC----CCHHHHHHHHHhCCcEEEeeccCC
Confidence 23444555555556 88999885443 345666778887666532 21 245666666555566677777777
Q ss_pred CcccccC-HHHHHHHHHHHHhcC
Q 014631 194 PCGNVFT-YQQLQKIAEKARKLG 215 (421)
Q Consensus 194 ptG~~~~-~~~l~~i~~~~~~~~ 215 (421)
.||.--. ..++++.++..|++.
T Consensus 175 vTG~~~~~~~~l~~~i~~ik~~~ 197 (259)
T PF00290_consen 175 VTGSRTELPDELKEFIKRIKKHT 197 (259)
T ss_dssp SSSTTSSCHHHHHHHHHHHHHTT
T ss_pred CCCCcccchHHHHHHHHHHHhhc
Confidence 8887543 366888888888764
No 434
>COG1435 Tdk Thymidine kinase [Nucleotide transport and metabolism]
Probab=47.69 E-value=81 Score=26.73 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=58.5
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNP 191 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p 191 (421)
+|=|+.|-...+.....|.+|++..|....- .......|.+...+.+.++.+ -.+.+.+.-. ..+..+++-..
T Consensus 15 SGKT~eLl~r~~~~~~~g~~v~vfkp~iD~R~~~~~V~Sr~G~~~~A~~i~~~~~---i~~~i~~~~~~~~~~~v~IDEa 91 (201)
T COG1435 15 SGKTEELLRRARRYKEAGMKVLVFKPAIDTRYGVGKVSSRIGLSSEAVVIPSDTD---IFDEIAALHEKPPVDCVLIDEA 91 (201)
T ss_pred CcchHHHHHHHHHHHHcCCeEEEEecccccccccceeeeccCCcccceecCChHH---HHHHHHhcccCCCcCEEEEehh
Confidence 4545555555556666788898888877532 223334454443333321110 1122222111 11456777666
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
+. ++.+.+..+.+++.+.|+.+|.=.--.+
T Consensus 92 QF-----~~~~~v~~l~~lad~lgi~Vi~~GL~~D 121 (201)
T COG1435 92 QF-----FDEELVYVLNELADRLGIPVICYGLDTD 121 (201)
T ss_pred Hh-----CCHHHHHHHHHHHhhcCCEEEEeccccc
Confidence 65 6677888999999898999986544444
No 435
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=47.40 E-value=40 Score=32.81 Aligned_cols=70 Identities=21% Similarity=0.415 Sum_probs=43.1
Q ss_pred HhhcCceeEeeeccCCCCccCCHHHHHhhhccCce--------EEEE----eCC--CCCcccccCHHHHHHHHHHHHhcC
Q 014631 150 ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV--------AMVI----VNP--GNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 150 ~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~--------~i~~----~~p--~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
....+.+.....+.++.+|.+.++.+.++...... -.+. ..+ ..+.|-.++.+++++|++.|+++|
T Consensus 31 ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~~rg 110 (445)
T cd06569 31 MAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAKARH 110 (445)
T ss_pred HHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHHHcC
Confidence 34556677777776667777766555443221100 0001 011 123456799999999999999999
Q ss_pred cEEE
Q 014631 216 IMVI 219 (421)
Q Consensus 216 ~~li 219 (421)
+-||
T Consensus 111 I~VI 114 (445)
T cd06569 111 IEVI 114 (445)
T ss_pred CEEE
Confidence 9888
No 436
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=46.06 E-value=2.1e+02 Score=25.11 Aligned_cols=72 Identities=17% Similarity=0.194 Sum_probs=44.1
Q ss_pred hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631 146 YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 146 ~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
|..+....+.+-+.+. ..-+|-+...++..++.+...-+ ......+-+.-|.+++.+|++-+++-..-+
T Consensus 93 y~DILD~K~L~eIVVn--~RIdWL~HfSALLSAvGE~NVpL---------A~~VNI~GvHNil~vAa~~kL~iFVPSTIG 161 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVVN--KRIDWLVHFSALLSAVGETNVPL---------ALQVNIRGVHNILQVAAKHKLKVFVPSTIG 161 (366)
T ss_pred hhhhhccccHHHhhcc--cccceeeeHHHHHHHhcccCCce---------eeeecchhhhHHHHHHHHcCeeEeeccccc
Confidence 4555566665544432 23357777778877776532211 111222446778899999999999887776
Q ss_pred ccc
Q 014631 226 HLT 228 (421)
Q Consensus 226 ~~~ 228 (421)
.|+
T Consensus 162 AFG 164 (366)
T KOG2774|consen 162 AFG 164 (366)
T ss_pred ccC
Confidence 654
No 437
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=45.76 E-value=56 Score=28.13 Aligned_cols=51 Identities=16% Similarity=0.168 Sum_probs=36.4
Q ss_pred HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc
Q 014631 172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 224 (421)
.+.++++++.+..++-+=.-+..+-.. .+..+++.++|++|++.+|+++-.
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~ 74 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRV 74 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcH
Confidence 688888888776666554444333222 466789999999999988887654
No 438
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=45.44 E-value=2e+02 Score=25.82 Aligned_cols=95 Identities=14% Similarity=0.242 Sum_probs=51.5
Q ss_pred HHHHHHHHhcCCC-CeEEEcCCCCc---chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcc
Q 014631 121 AIQVILTVLARPG-ANILLPKPGFP---LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196 (421)
Q Consensus 121 al~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG 196 (421)
++...+.-+.+.| |.|++++--+. .+...++..|...+.+=. ++ -+.+.++...+.....|++.+-...||
T Consensus 107 G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~GvTG 181 (263)
T CHL00200 107 GINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTGVTG 181 (263)
T ss_pred CHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCCCCC
Confidence 4555555555666 77888764442 234556677776655422 22 134555555543344555555555677
Q ss_pred ccc-CHHHHHHHHHHHHhc-CcEEEE
Q 014631 197 NVF-TYQQLQKIAEKARKL-GIMVIS 220 (421)
Q Consensus 197 ~~~-~~~~l~~i~~~~~~~-~~~li~ 220 (421)
.-- -.+.++++.+..+++ +..+.+
T Consensus 182 ~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 182 LKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCccccHHHHHHHHHHHHhcCCCEEE
Confidence 631 125566666666654 444544
No 439
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This domain is found in family 53 of the glycosyl hydrolase classification []. These enzymes are endo-1,4- beta-galactanases (3.2.1.89 from EC). The structure of this domain is known [] and has a TIM barrel fold.; GO: 0015926 glucosidase activity; PDB: 1HJQ_A 1HJS_A 1HJU_B 1FHL_A 1FOB_A 2GFT_A 1UR4_B 1UR0_A 1R8L_B 2CCR_A ....
Probab=45.20 E-value=1.5e+02 Score=27.57 Aligned_cols=80 Identities=23% Similarity=0.259 Sum_probs=43.2
Q ss_pred hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCc-eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc
Q 014631 146 YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENT-VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 146 ~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 224 (421)
+....+..|... .. +++-..|+-++.+...-+. ++=+..+|.+ |-..+.++..++++-+++.|+-+++|--|
T Consensus 8 ~~~~~E~~G~~f--~~---~~G~~~d~~~ilk~~G~N~vRlRvwv~P~~--~g~~~~~~~~~~akrak~~Gm~vlldfHY 80 (332)
T PF07745_consen 8 SLPEMEAAGVKF--YD---ENGQEKDLFQILKDHGVNAVRLRVWVNPYD--GGYNDLEDVIALAKRAKAAGMKVLLDFHY 80 (332)
T ss_dssp THHHHHHTT-----B----TTSSB--HHHHHHHTT--EEEEEE-SS-TT--TTTTSHHHHHHHHHHHHHTT-EEEEEE-S
T ss_pred HHHHHHHcCCeE--EC---CCCCCCCHHHHHHhcCCCeEEEEeccCCcc--cccCCHHHHHHHHHHHHHCCCeEEEeecc
Confidence 344455666552 21 2332345545544332232 3336777766 45577799999999999999999999999
Q ss_pred cccccCCC
Q 014631 225 DHLTFGST 232 (421)
Q Consensus 225 ~~~~~~~~ 232 (421)
+++.-+..
T Consensus 81 SD~WaDPg 88 (332)
T PF07745_consen 81 SDFWADPG 88 (332)
T ss_dssp SSS--BTT
T ss_pred cCCCCCCC
Confidence 99875543
No 440
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=45.12 E-value=44 Score=31.46 Aligned_cols=69 Identities=26% Similarity=0.529 Sum_probs=40.8
Q ss_pred hhcCceeEeeeccCCCCccCCHHHHHhhhccC--ceEEEEeCC-----CCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADEN--TVAMVIVNP-----GNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~--~~~i~~~~p-----~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
...+.+...+.+.++.+|.+.++...++-... ..--....| ..+.|-.++.+++++|++.|+++|+-||
T Consensus 28 a~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VI 103 (357)
T cd06563 28 ALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVI 103 (357)
T ss_pred HHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEE
Confidence 34566666666655566666554443321110 000000011 2245678999999999999999999888
No 441
>smart00642 Aamy Alpha-amylase domain.
Probab=45.08 E-value=27 Score=28.72 Aligned_cols=26 Identities=31% Similarity=0.525 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
.++++++++.|+++|+.||.|-+.-.
T Consensus 69 ~~d~~~lv~~~h~~Gi~vilD~V~NH 94 (166)
T smart00642 69 MEDFKELVDAAHARGIKVILDVVINH 94 (166)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCC
Confidence 39999999999999999999988765
No 442
>PF04016 DUF364: Domain of unknown function (DUF364); InterPro: IPR007161 This is a entry represents of bacterial and archaeal proteins of unknown function.; PDB: 3L5O_B 3NPG_A.
Probab=44.56 E-value=74 Score=25.56 Aligned_cols=76 Identities=22% Similarity=0.304 Sum_probs=45.5
Q ss_pred CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC----ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHH
Q 014631 131 RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG----WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQK 206 (421)
Q Consensus 131 ~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~----~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~ 206 (421)
.+|++|.+.-. +.+....++..+.++..+..+++.. ..+..++-++.+. +..++++ ||..+-...+..
T Consensus 9 ~~~~~V~~VG~-f~P~~~~l~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~l~-~aD~vii------TGsTlvN~Ti~~ 80 (147)
T PF04016_consen 9 GPGDKVGMVGY-FQPLVEKLKERGAEVRVFDLNPDNIGEEPGDVPDEDAEEILP-WADVVII------TGSTLVNGTIDD 80 (147)
T ss_dssp TTTSEEEEES---HCCHHHHCCCCSEEEEEESSGGG--SSCT-EEGGGHHHHGG-G-SEEEE------ECHHCCTTTHHH
T ss_pred cCCCEEEEEcC-cHHHHHHHhcCCCCEEEEECCCCCCCCCCCcCCHHHHHHHHc-cCCEEEE------EeeeeecCCHHH
Confidence 46788877652 2245555556777888888776321 1223344444544 4455554 777766677999
Q ss_pred HHHHHHhc
Q 014631 207 IAEKARKL 214 (421)
Q Consensus 207 i~~~~~~~ 214 (421)
|.+.|++.
T Consensus 81 iL~~~~~~ 88 (147)
T PF04016_consen 81 ILELARNA 88 (147)
T ss_dssp HHHHTTTS
T ss_pred HHHhCccC
Confidence 99999853
No 443
>COG4050 Uncharacterized protein conserved in archaea [Function unknown]
Probab=43.86 E-value=83 Score=23.89 Aligned_cols=43 Identities=14% Similarity=0.295 Sum_probs=32.6
Q ss_pred HHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 367 EFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 367 ~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+++..+.+++||-+ +++-+..++|+-..+++.|..+++.+..+
T Consensus 108 El~~ylvR~k~iPi-----------LelkYP~s~Eea~~~VnkI~~FL~sLe~~ 150 (152)
T COG4050 108 ELCVYLVRRKGIPI-----------LELKYPRSEEEAIDFVNKIANFLKSLEAQ 150 (152)
T ss_pred hHHHHHhhhcCCce-----------EEEeCCCcHHHHHHHHHHHHHHHHhhhhh
Confidence 45555556666644 47778888999999999999999988655
No 444
>PLN02955 8-amino-7-oxononanoate synthase
Probab=43.38 E-value=3.4e+02 Score=26.82 Aligned_cols=133 Identities=12% Similarity=0.070 Sum_probs=70.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH-HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhc-----
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC-KQAIQVILTVLARPGANILLPKPGFPLYEANARHT----- 153 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~-~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~----- 153 (421)
++|-.....++++++..+-+.+ +|.+......+..... .+-++..+..+.+. +..++...+|.....+....
T Consensus 110 ndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~AN~~~i~aL~~~~~ 187 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFAANMAAMVAIGSVAS 187 (476)
T ss_pred cCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHHHHHHHHHHHhhccc
Confidence 4566666689999999998865 7766555555544332 23355555555544 45556666776554444332
Q ss_pred ----------CceeEeeeccCCCCccCCHHHHHhh---hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 154 ----------RLEIRHFDLLPEKGWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 154 ----------g~~~~~~~~~~~~~~~~d~e~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
+-+...+ .+... . -.+..- .+.+..+-+...+||- .+.++++.+-+.....+||+
T Consensus 188 ~~~~~~~~~~~~~d~i~-~D~~~----H-aSI~dG~~ls~~~~~a~~~~f~HND------~~~Le~~L~~~~~~~~~Vv~ 255 (476)
T PLN02955 188 LLAASGKPLKNEKVAIF-SDALN----H-ASIIDGVRLAERQGNVEVFVYRHCD------MYHLNSLLSSCKMKRKVVVT 255 (476)
T ss_pred cccccccccCCCCcEEE-Eeccc----h-HHHHHHHHhccccCCceEEEeCCCC------HHHHHHHHHhCCCCceEEEE
Confidence 1111111 11110 1 111111 1111112233445552 26677777666555678999
Q ss_pred cccccc
Q 014631 221 DEVYDH 226 (421)
Q Consensus 221 De~~~~ 226 (421)
|.+|+.
T Consensus 256 EgV~Sm 261 (476)
T PLN02955 256 DSLFSM 261 (476)
T ss_pred eCCCCC
Confidence 999887
No 445
>PTZ00081 enolase; Provisional
Probab=43.26 E-value=1.3e+02 Score=29.21 Aligned_cols=97 Identities=10% Similarity=0.156 Sum_probs=60.4
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCc----chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFP----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
++.+.+....+.+ ++-+-+.+++|... +|....+..|-.+ ++--++.+.-+++.+.+.+..+..-++..-++
T Consensus 282 s~~eli~~~~~~l-~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i---~IvgDE~~~tn~~~l~~~I~~~aad~i~iKvn 357 (439)
T PTZ00081 282 TGEELVELYLDLV-KKYPIVSIEDPFDQDDWEAYAKLTAAIGQKV---QIVGDDLLVTNPTRIKKAIEKKACNALLLKVN 357 (439)
T ss_pred CHHHHHHHHHHHH-hcCCcEEEEcCCCcccHHHHHHHHHhhCCCc---eEEcCCcccCCHHHHHHHHHhCCCCEEEeccc
Confidence 4556666555555 34457888999865 3444444443222 22223333346888888887665555566666
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
. .|.+ .+..+++++|+++|+.+++=
T Consensus 358 q-iGGI---Te~l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 358 Q-IGTV---TEAIEAAKLAQKNGWGVMVS 382 (439)
T ss_pred c-ccCH---HHHHHHHHHHHHcCCcEEEe
Confidence 5 5555 57888999999999877763
No 446
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=42.05 E-value=25 Score=35.91 Aligned_cols=26 Identities=35% Similarity=0.598 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHhcCcEEEEccccccc
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
++++++++.|+++|+-||.|-++-..
T Consensus 229 ~efk~lV~~~H~~Gi~VilDvV~NH~ 254 (605)
T TIGR02104 229 RELKQMIQALHENGIRVIMDVVYNHT 254 (605)
T ss_pred HHHHHHHHHHHHCCCEEEEEEEcCCc
Confidence 89999999999999999999998654
No 447
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=41.51 E-value=1.1e+02 Score=20.63 Aligned_cols=60 Identities=10% Similarity=0.218 Sum_probs=34.7
Q ss_pred hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcEEEEc
Q 014631 146 YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 146 ~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D 221 (421)
+....+..|.++..... ..+.++. ....+++.+|... ++ ++++++|.++..+=|-++|.|
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~~----~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALEA----DDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhCC----CCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 34455556766654321 2334432 3345666777522 33 488999999998766666654
No 448
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=41.50 E-value=98 Score=24.69 Aligned_cols=57 Identities=25% Similarity=0.262 Sum_probs=39.9
Q ss_pred CCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH-HHHHHHHHHH-hcCcE-EEEcccccc
Q 014631 170 VDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ-QLQKIAEKAR-KLGIM-VISDEVYDH 226 (421)
Q Consensus 170 ~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~-~l~~i~~~~~-~~~~~-li~De~~~~ 226 (421)
.+++.+.+.+.+ +...+++.-|.|..|...+.. ..+++++..+ +.++. ++.||-.+.
T Consensus 40 ~~~~~l~~li~~~~~~~vVVGlP~~m~g~~~~~~~~~~~f~~~L~~r~~lpv~l~DERltT 100 (141)
T COG0816 40 QDFNALLKLVKEYQVDTVVVGLPLNMDGTEGPRAELARKFAERLKKRFNLPVVLWDERLST 100 (141)
T ss_pred hhHHHHHHHHHHhCCCEEEEecCcCCCCCcchhHHHHHHHHHHHHHhcCCCEEEEcCccCH
Confidence 488888887755 567889999999998876643 3666776666 44554 447776544
No 449
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=41.01 E-value=76 Score=29.74 Aligned_cols=46 Identities=22% Similarity=0.209 Sum_probs=26.5
Q ss_pred CHHHHHhhhccCceEEEEeCC-CCCcccc--cCHHHHHHHHHHHHhcCc
Q 014631 171 DLDGLEALADENTVAMVIVNP-GNPCGNV--FTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p-~nptG~~--~~~~~l~~i~~~~~~~~~ 216 (421)
+++++..++.....+|++..+ -|..+.. ++.++++++++.|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 456666666555555655544 2333333 666666666666666665
No 450
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=40.92 E-value=20 Score=24.22 Aligned_cols=27 Identities=37% Similarity=0.538 Sum_probs=21.0
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
...+.-|.|.+ +.+.++.|++++++||
T Consensus 11 ~v~~~~~~G~i-~~~~l~~la~ia~~yg 37 (69)
T PF03460_consen 11 MVRIRIPGGRI-SAEQLRALAEIAEKYG 37 (69)
T ss_dssp EEEEB-GGGEE-EHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCEEE-CHHHHHHHHHHHHHhC
Confidence 33444467877 8899999999999998
No 451
>PRK06194 hypothetical protein; Provisional
Probab=40.70 E-value=2.6e+02 Score=24.92 Aligned_cols=65 Identities=15% Similarity=0.061 Sum_probs=32.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.|+...=..+.+.|.+.|.+|++.+-.-........ ..+.++..+..+-. |.+++++.+
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~~~~~~ 74 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVS-----DAAQVEALA 74 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCC-----CHHHHHHHH
Confidence 356666665444444555666778887766543222222221 22455655655432 455555544
No 452
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=40.60 E-value=2.3e+02 Score=27.28 Aligned_cols=110 Identities=20% Similarity=0.227 Sum_probs=61.3
Q ss_pred CCCCCcEEEcCC-----HHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 106 KLSPDDVYLTAG-----CKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 106 ~~~~~~i~~~~g-----~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++-+..+++-.| =+..+..+...+.+.+ +|++....-+.. ..-+..+|.....+.+..+ .++|++.+.
T Consensus 89 G~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e~I~~~ 163 (456)
T COG1066 89 GLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLEDIIAE 163 (456)
T ss_pred CcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHHHHHHH
Confidence 444545544333 2334444444555566 788776666543 3334556643333333333 478888887
Q ss_pred hcc-CceEEEEeCCC---CCc-----cc-ccCHHHHHHHHHHHHhcCcEEEE
Q 014631 179 ADE-NTVAMVIVNPG---NPC-----GN-VFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 179 ~~~-~~~~i~~~~p~---npt-----G~-~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
+.. ++.++++.+-+ +|. |. ..-.+--.++.++|++.|+.++.
T Consensus 164 l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 164 LEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 654 56666665553 222 43 33344557888999999986654
No 453
>PF02702 KdpD: Osmosensitive K+ channel His kinase sensor domain; InterPro: IPR003852 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. Signal transducing histidine kinases are the key elements in two-component signal transduction systems, which control complex processes such as the initiation of development in microorganisms [, ]. Examples of histidine kinases are EnvZ, which plays a central role in osmoregulation [], and CheA, which plays a central role in the chemotaxis system []. Histidine kinases usually have an N-terminal ligand-binding domain and a C-terminal kinase domain, but other domains may also be present. The kinase domain is responsible for the autophosphorylation of the histidine with ATP, the phosphotransfer from the kinase to an aspartate of the response regulator, and (with bifunctional enzymes) the phosphotransfer from aspartyl phosphate back to ADP or to water []. The kinase core has a unique fold, distinct from that of the Ser/Thr/Tyr kinase superfamily. HKs can be roughly divided into two classes: orthodox and hybrid kinases [, ]. Most orthodox HKs, typified by the Escherichia coli EnvZ protein, function as periplasmic membrane receptors and have a signal peptide and transmembrane segment(s) that separate the protein into a periplasmic N-terminal sensing domain and a highly conserved cytoplasmic C-terminal kinase core. Members of this family, however, have an integral membrane sensor domain. Not all orthodox kinases are membrane bound, e.g., the nitrogen regulatory kinase NtrB (GlnL) is a soluble cytoplasmic HK []. Hybrid kinases contain multiple phosphodonor and phosphoacceptor sites and use multi-step phospho-relay schemes instead of promoting a single phosphoryl transfer. In addition to the sensor domain and kinase core, they contain a CheY-like receiver domain and a His-containing phosphotransfer (HPt) domain. This entry represents the N-terminal domain found in KdpD sensor kinase proteins, which regulate the kdpFABC operon responsible for potassium transport []. The N-terminal domain forms part of the cytoplasmic region of the protein, which may be the sensor domain responsible for sensing turgor pressure [].; GO: 0000155 two-component sensor activity, 0004673 protein histidine kinase activity, 0000160 two-component signal transduction system (phosphorelay), 0016020 membrane; PDB: 2R8R_B.
Probab=40.50 E-value=1.1e+02 Score=26.06 Aligned_cols=99 Identities=21% Similarity=0.171 Sum_probs=47.5
Q ss_pred CCHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC---ccCCHHHHHhhhccCceEEEEeCC
Q 014631 116 AGCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG---WEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~---~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
.|-|-++..-.+.+.+.| |.|+-.--+|.--.-.+...|.+..+.......+ ..+|+|++.+ .++.++++-.-
T Consensus 16 VGKTy~ML~ea~~l~~~G~DVViG~vethgR~et~~l~~gLe~iP~~~i~y~g~~~~E~DldaiL~---R~P~vvLVDEL 92 (211)
T PF02702_consen 16 VGKTYAMLQEAHRLKEQGVDVVIGYVETHGRPETEALLEGLEVIPRKKIEYRGRTLEEMDLDAILA---RRPQVVLVDEL 92 (211)
T ss_dssp SSHHHHHHHHHHHHHHTT--EEEEE---TT-HHHHHHHCTS-B---EEEEETTEEEEE--HHHHHH---H--SEEEES-T
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEecCCCcHHHHHHHcCCCcCCCeeEeeCCEecccCCHHHHHh---cCCCEEEeCcc
Confidence 355777777777777788 5555444445433444455666544332211111 2467776654 35666666544
Q ss_pred --CCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 192 --GNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 192 --~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.|+.|.--. .+++.+-++.. .|+-++
T Consensus 93 AHtN~pgsr~~-kR~qDVeeLL~-aGIdV~ 120 (211)
T PF02702_consen 93 AHTNAPGSRHK-KRYQDVEELLD-AGIDVY 120 (211)
T ss_dssp T-B--TT-SSS-BHHHHHHHHHH-TT-EEE
T ss_pred cccCCCCCCCc-ccHHhHHHHHH-CCCeEE
Confidence 588886543 77888888775 587665
No 454
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=40.36 E-value=97 Score=23.33 Aligned_cols=21 Identities=24% Similarity=0.495 Sum_probs=15.8
Q ss_pred CHHHHHHHHHHHHhcCcEEEE
Q 014631 200 TYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~ 220 (421)
+.++.++|.+.++++|..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 567888888888888776654
No 455
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=40.21 E-value=3.2e+02 Score=27.76 Aligned_cols=100 Identities=15% Similarity=0.155 Sum_probs=58.6
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEE-cCCCCcch------HHHHhhcCc-ee-EeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 115 TAGCKQAIQVILTVLARPGANILL-PKPGFPLY------EANARHTRL-EI-RHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~-~~p~y~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
-.+...|...+..++.+. .+|++ -+..-.+. ...++..|. .+ .++|..-.++++++.+.+++....+...
T Consensus 52 l~~m~~a~~ri~~ai~~~-e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~L 130 (575)
T PRK11070 52 LSGIEKAVELLYNALREG-TRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQL 130 (575)
T ss_pred hhCHHHHHHHHHHHHHCC-CEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCE
Confidence 367777777777776543 44444 34443333 334456676 33 4455444678999999999877655555
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 224 (421)
++.+ .|.++.. +. ++.|+++|+-+|+=|-|
T Consensus 131 iItv--D~Gi~~~---e~----i~~a~~~gidvIVtDHH 160 (575)
T PRK11070 131 IVTV--DNGISSH---AG----VAHAHALGIPVLVTDHH 160 (575)
T ss_pred EEEE--cCCcCCH---HH----HHHHHHCCCCEEEECCC
Confidence 4433 3333322 33 35677889866654455
No 456
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=40.05 E-value=1.1e+02 Score=29.54 Aligned_cols=93 Identities=9% Similarity=0.115 Sum_probs=56.2
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
.+++..+... .++-+-+++++|.... +....+..|.. +|+-.++.+.-+++.+.+.+..+..-++..-++.
T Consensus 264 ~eai~~~~~l-~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~---ipi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~- 338 (408)
T cd03313 264 EELIDYYKEL-VKKYPIVSIEDPFDEDDWEGWAKLTAKLGDK---IQIVGDDLFVTNPERLKKGIEKKAANALLIKVNQ- 338 (408)
T ss_pred HHHHHHHHHH-HHhCCcEEEEeCCCCcCHHHHHHHHHhcCCC---CeEEcCCcccCCHHHHHHHHHhCCCCEEEEcccc-
Confidence 5555554433 3334577889988753 33333333222 2222222222378888888876655556666665
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEE
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.|.+ .+..+++++|+.+|+.++
T Consensus 339 iGGi---te~~~ia~lA~~~G~~~~ 360 (408)
T cd03313 339 IGTL---TETIEAIKLAKKNGYGVV 360 (408)
T ss_pred cCCH---HHHHHHHHHHHHcCCeEE
Confidence 4444 578899999999999876
No 457
>COG0074 SucD Succinyl-CoA synthetase, alpha subunit [Energy production and conversion]
Probab=39.59 E-value=1.4e+02 Score=26.83 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=56.2
Q ss_pred CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
-..+..-|.|.....+.+..+++...+.+++. .-.|++.++++...+.+++..-+ .|..|.-++.+.+++
T Consensus 45 G~~~~g~PVf~tV~EA~~~~~a~~svI~Vp~~----~aadai~EAida~i~liv~ITEg------IP~~D~~~~~~~a~~ 114 (293)
T COG0074 45 GQTILGLPVFNTVEEAVKETGANASVIFVPPP----FAADAILEAIDAGIKLVVIITEG------IPVLDMLELKRYARE 114 (293)
T ss_pred ceEEcCccHHHHHHHHHHhhCCCEEEEecCcH----HHHHHHHHHHhCCCcEEEEEeCC------CCHHHHHHHHHHHHh
Confidence 34555577787777888777877555544332 35677788887767777665555 344888899999999
Q ss_pred cCcEEEEccccc
Q 014631 214 LGIMVISDEVYD 225 (421)
Q Consensus 214 ~~~~li~De~~~ 225 (421)
.+..+|==++-+
T Consensus 115 ~g~~iiGPncpG 126 (293)
T COG0074 115 KGTRLIGPNCPG 126 (293)
T ss_pred cCCEEECCCCCc
Confidence 998888544443
No 458
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=39.08 E-value=79 Score=26.30 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=60.5
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
+|=|.-+-..+..+...|.+|++..|.-.. ...+..+.|...... ..+ .-++.++.+.+..+..+|++-..|
T Consensus 12 sGKS~eLi~~~~~~~~~~~~v~~~kp~~D~R~~~~~I~s~~g~~~~~~-~~~----~~~~~~~~~~~~~~~dvI~IDEaQ 86 (176)
T PF00265_consen 12 SGKSTELIRRIHRYEIAGKKVLVFKPAIDTRYGEDKIVSHDGISLEAI-VDP----IDNLFEIIDILENDYDVIGIDEAQ 86 (176)
T ss_dssp SSHHHHHHHHHHHHHHTT-EEEEEEESTSCCCCSSEEEHTTSCEEEEE-SSE----ESSGGGGGGGCCTTCSEEEESSGG
T ss_pred ChhHHHHHHHHHHHHhCCCeEEEEEecccCcCCCCeEEecCCCccccc-ccc----hhhHHHHHHHhccCCCEEEEechH
Confidence 453333333344444567888887665532 112334556554444 111 013445555555557778777776
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 238 (421)
. ++ +++.++++.+..+|+.+++=.--.++ .++++....
T Consensus 87 F-----f~-~~i~~l~~~~~~~g~~Vi~~GL~~df--~~~~F~~~~ 124 (176)
T PF00265_consen 87 F-----FD-EQIVQLVEILANKGIPVICAGLDTDF--RGEPFGGSP 124 (176)
T ss_dssp G-----ST-TTHHHHHHHHHHTT-EEEEEEESB-T--TSSB-TTHH
T ss_pred h-----hH-HHHHHHHHHHHhCCCeEEEEeeCCcc--ccCcchhHH
Confidence 5 45 67888899999999999976655553 355554433
No 459
>KOG3974 consensus Predicted sugar kinase [Carbohydrate transport and metabolism]
Probab=38.76 E-value=1e+02 Score=27.36 Aligned_cols=69 Identities=17% Similarity=0.255 Sum_probs=40.5
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC--CCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG--NPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~--nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
....+.+.-+.+..|+....+ +.+.+++.+. +.-++ ++.|. ---++. +.+++|.+.++..++.+++|.=
T Consensus 70 a~vIKsYsPdLIVHP~l~~~~---av~~i~k~L~-Rlhav-VIGPGLGRdp~~~---k~i~~iley~~~~dvP~VIDaD 140 (306)
T KOG3974|consen 70 AVVIKSYSPDLIVHPVLDQEN---AVDIIEKLLQ-RLHAV-VIGPGLGRDPAIL---KEIAKILEYLRGKDVPLVIDAD 140 (306)
T ss_pred HHHHhhcCCceeecccccCCc---hHhHHHHHHh-heeEE-EECCCCCCCHHHH---HHHHHHHHHHhcCCCcEEEcCC
Confidence 344455555656556543322 4455565443 33344 44442 112233 7889999999999999999943
No 460
>PRK00077 eno enolase; Provisional
Probab=38.70 E-value=1.3e+02 Score=29.12 Aligned_cols=92 Identities=9% Similarity=0.113 Sum_probs=54.2
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
++...+.+ +.++-+-+++++|.... +....+..|-. +|+--++.+.-+++.+.+.+..+..-++..-++. .
T Consensus 265 e~~~~~~~-l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~---ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~~~-~ 339 (425)
T PRK00077 265 EMIDYLAE-LVDKYPIVSIEDGLDENDWEGWKLLTEKLGDK---VQLVGDDLFVTNTKRLKKGIEKGAANSILIKVNQ-I 339 (425)
T ss_pred HHHHHHHH-HHhhCCcEEEEcCCCCccHHHHHHHHHhcCCC---CeEEcCCCccCCHHHHHHHHHhCCCCEEEeCccc-c
Confidence 33443333 33444678899998753 33333333311 2222222222368888888876554455666665 4
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEE
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li 219 (421)
|.+ .+..+++++|+.+|+.++
T Consensus 340 GGi---tea~~ia~lA~~~gi~~~ 360 (425)
T PRK00077 340 GTL---TETLDAIELAKRAGYTAV 360 (425)
T ss_pred CCH---HHHHHHHHHHHHcCCeEE
Confidence 444 578899999999999655
No 461
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=38.70 E-value=1.5e+02 Score=21.56 Aligned_cols=68 Identities=18% Similarity=0.156 Sum_probs=41.8
Q ss_pred cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 144 PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 144 ~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
..|...++..|.+.... ..+++..-....+++.+.. ..+| ++++.. +..-...+.+.|+++|+.++.=
T Consensus 13 ~~~~~~~~~~G~~~~~h--g~~~~~~~~~~~l~~~i~~-aD~VIv~t~~v-------sH~~~~~vk~~akk~~ip~~~~ 81 (97)
T PF10087_consen 13 RRYKRILEKYGGKLIHH--GRDGGDEKKASRLPSKIKK-ADLVIVFTDYV-------SHNAMWKVKKAAKKYGIPIIYS 81 (97)
T ss_pred HHHHHHHHHcCCEEEEE--ecCCCCccchhHHHHhcCC-CCEEEEEeCCc-------ChHHHHHHHHHHHHcCCcEEEE
Confidence 35677888899988777 2233322233347776653 3444 433332 2355788889999999987753
No 462
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=38.48 E-value=1.4e+02 Score=26.47 Aligned_cols=93 Identities=20% Similarity=0.359 Sum_probs=53.1
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHHHHhh-cCceeEeeeccCCCCccC-CHHHHHhhhccCceEEE
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPK-PGFPLYEANARH-TRLEIRHFDLLPEKGWEV-DLDGLEALADENTVAMV 187 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~-d~e~l~~~~~~~~~~i~ 187 (421)
+|++-.|++++-.++- .|.+.|. |+++- ..|.+ ...... .+.++ .. .++ +.+.+++.+.++..-+
T Consensus 2 ~ILvlgGTtE~r~la~-~L~~~g~-v~~sv~t~~g~-~~~~~~~~~~~v---~~-----G~lg~~~~l~~~l~~~~i~~- 69 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAE-RLAEAGY-VIVSVATSYGG-ELLKPELPGLEV---RV-----GRLGDEEGLAEFLRENGIDA- 69 (249)
T ss_pred EEEEEechHHHHHHHH-HHHhcCC-EEEEEEhhhhH-hhhccccCCceE---EE-----CCCCCHHHHHHHHHhCCCcE-
Confidence 4788899999988765 4556666 54432 22221 111011 11121 11 135 8889988886543333
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
++..++|....++ +.+.+.|++.|+..+
T Consensus 70 vIDATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 70 VIDATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred EEECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 4455557665543 556678888888766
No 463
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=37.96 E-value=3.3e+02 Score=25.14 Aligned_cols=143 Identities=17% Similarity=0.199 Sum_probs=76.6
Q ss_pred HHHHHHHHHHHhcCCC----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631 64 PVAADAVVDAVRSAEF----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLP 139 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~ 139 (421)
.+..+-+.+.+..... -.|....|.......+++-+. .+..+++++-+++.|-.++- +.. +-.|++.
T Consensus 45 d~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~------~~~~dviv~i~tp~Aq~~~s-~~~--~iPVV~a 115 (322)
T COG2984 45 DAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLV------GDKPDVIVAIATPAAQALVS-ATK--TIPVVFA 115 (322)
T ss_pred HHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhh------cCCCcEEEecCCHHHHHHHH-hcC--CCCEEEE
Confidence 4444445555543211 134556677788888888874 34446777767666554433 222 1234333
Q ss_pred ---CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh---hhccCceEE-EEeCCCCCcccccCHHHHHHHHHHHH
Q 014631 140 ---KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA---LADENTVAM-VIVNPGNPCGNVFTYQQLQKIAEKAR 212 (421)
Q Consensus 140 ---~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~---~~~~~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~ 212 (421)
+|.=......+..-|.++..+. +. .++++-.+ .+-++.+-| ++.+|+-+-- ...++++.+.++
T Consensus 116 avtd~v~a~Lv~~~~~pg~NvTGvs--D~----~~v~q~i~lik~~~Pnak~Igv~Y~p~E~ns----~~l~eelk~~A~ 185 (322)
T COG2984 116 AVTDPVGAKLVKSLEQPGGNVTGVS--DL----LPVAQQIELIKALLPNAKSIGVLYNPGEANS----VSLVEELKKEAR 185 (322)
T ss_pred ccCchhhccCCccccCCCCceeecC--Cc----chHHHHHHHHHHhCCCCeeEEEEeCCCCccc----HHHHHHHHHHHH
Confidence 2222222233334445555442 11 23333333 234566555 7888864332 256888889999
Q ss_pred hcCcEEEEccccc
Q 014631 213 KLGIMVISDEVYD 225 (421)
Q Consensus 213 ~~~~~li~De~~~ 225 (421)
+.|+-+++=.+..
T Consensus 186 ~~Gl~vve~~v~~ 198 (322)
T COG2984 186 KAGLEVVEAAVTS 198 (322)
T ss_pred HCCCEEEEEecCc
Confidence 9999998765544
No 464
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=37.84 E-value=1.6e+02 Score=26.58 Aligned_cols=56 Identities=18% Similarity=0.232 Sum_probs=28.7
Q ss_pred CHHHHHhhhcc-CceEEEEeCC-CCCcccccCH--------HHHHHHHHHHHhcCcEEE---Ecccccc
Q 014631 171 DLDGLEALADE-NTVAMVIVNP-GNPCGNVFTY--------QQLQKIAEKARKLGIMVI---SDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~-~~~~i~~~~p-~nptG~~~~~--------~~l~~i~~~~~~~~~~li---~De~~~~ 226 (421)
|.+++.+.+.+ ++..|+.+.. +++...--.+ .-...|++.|.++|+.+| .|.+|.+
T Consensus 39 d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~~li~~STd~VFdG 107 (286)
T PF04321_consen 39 DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGARLIHISTDYVFDG 107 (286)
T ss_dssp SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT-EEEEEEEGGGS-S
T ss_pred CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCCcEEEeeccEEEcC
Confidence 66777776654 4566665543 3333322221 334688999999998776 3555543
No 465
>PRK00278 trpC indole-3-glycerol-phosphate synthase; Reviewed
Probab=37.84 E-value=95 Score=27.74 Aligned_cols=49 Identities=16% Similarity=0.293 Sum_probs=36.1
Q ss_pred CccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 167 GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 167 ~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
+|-+++.++.++..-+..++.+.. ..++.++++++.+.|+++|+-+++|
T Consensus 118 dfi~~~~qi~~a~~~GAD~VlLi~------~~l~~~~l~~li~~a~~lGl~~lve 166 (260)
T PRK00278 118 DFIIDPYQIYEARAAGADAILLIV------AALDDEQLKELLDYAHSLGLDVLVE 166 (260)
T ss_pred eecCCHHHHHHHHHcCCCEEEEEe------ccCCHHHHHHHHHHHHHcCCeEEEE
Confidence 466777788777766666665432 2244578999999999999998887
No 466
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=37.74 E-value=60 Score=28.45 Aligned_cols=65 Identities=22% Similarity=0.347 Sum_probs=38.0
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
...++..|.++..+ .+...+..--.+.++.++..+..+|++. |..++. ...+.+.|++.|+.+|.
T Consensus 21 ~~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~-~~~~~~-------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 21 KAAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVS-PVDPDS-------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEE-SSSTTT-------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEec-CCCHHH-------HHHHHHHHhhcCceEEE
Confidence 55667788888775 1222221223455566777788877644 433333 33444557788998775
No 467
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=37.44 E-value=1.4e+02 Score=27.16 Aligned_cols=48 Identities=17% Similarity=0.200 Sum_probs=33.0
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+++.+|.+.+++.++ .+...+++ +.++.-+..++.++++++.+.+.+.
T Consensus 15 ~dg~iD~~~l~~~i~~l~~~Gv~gi~~-~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 15 EDGSVDFAALRKLVDYLIANGTDGLVV-VGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEEE-CCcCCccccCCHHHHHHHHHHHHHH
Confidence 345688888877553 45566643 4555566788888888888877754
No 468
>PLN03244 alpha-amylase; Provisional
Probab=36.09 E-value=56 Score=34.06 Aligned_cols=33 Identities=21% Similarity=0.276 Sum_probs=28.0
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEccccccccc
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF 229 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 229 (421)
..-++++++++++.|++.|+-||.|-++..+..
T Consensus 436 RYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~ 468 (872)
T PLN03244 436 RYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAA 468 (872)
T ss_pred ccCCHHHHHHHHHHHHHCCCEEEEEecCccCCC
Confidence 333569999999999999999999999977653
No 469
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=36.01 E-value=1.6e+02 Score=26.80 Aligned_cols=52 Identities=15% Similarity=0.107 Sum_probs=35.1
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEE
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVI 219 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li 219 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++++++++.+.+. ++.+|
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi-~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi 73 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAAL-FAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVL 73 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEE-EECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEE
Confidence 45689888877653 345555 455555667788989999988877654 34444
No 470
>PRK13937 phosphoheptose isomerase; Provisional
Probab=35.79 E-value=2.6e+02 Score=23.38 Aligned_cols=36 Identities=33% Similarity=0.448 Sum_probs=23.5
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
.++++..+++++.. |.. .++.++++.|+++|+.+|.
T Consensus 103 ~~~~~Dl~i~iS~s----G~t---~~~~~~~~~ak~~g~~~I~ 138 (188)
T PRK13937 103 LGRPGDVLIGISTS----GNS---PNVLAALEKARELGMKTIG 138 (188)
T ss_pred hCCCCCEEEEEeCC----CCc---HHHHHHHHHHHHCCCeEEE
Confidence 33444444554433 333 7889999999999987763
No 471
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=35.69 E-value=1.5e+02 Score=27.44 Aligned_cols=22 Identities=23% Similarity=0.131 Sum_probs=15.7
Q ss_pred HHHHHHHhhcCeeEEeCCCCCC
Q 014631 367 EFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 367 ~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
.-+..++.+.||+-.+|.+|..
T Consensus 268 ~~~~~~a~~~g~i~k~g~w~~~ 289 (321)
T TIGR02012 268 GEIIDLAVELDIIKKAGSWYSY 289 (321)
T ss_pred hHHHHHHHhCCcEEcccCEEEE
Confidence 3344567888999999877644
No 472
>PF03748 FliL: Flagellar basal body-associated protein FliL; InterPro: IPR005503 This FliL protein controls the rotational direction of the flagella during chemotaxis []. FliL is a cytoplasmic membrane protein associated with the basal body [].; GO: 0001539 ciliary or flagellar motility, 0006935 chemotaxis, 0009425 bacterial-type flagellum basal body
Probab=35.63 E-value=42 Score=24.55 Aligned_cols=52 Identities=27% Similarity=0.300 Sum_probs=34.5
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.+.+.+++...+............|...|++.+.+.+++.++ +..-.+|+||
T Consensus 43 ~~~ird~ii~~l~~~~~~~l~~~~g~~~Lk~~l~~~in~~l~-~~~V~~V~ft 94 (99)
T PF03748_consen 43 MPRIRDAIISYLSSKTAEDLSGPEGKERLKDELKDRINKILG-KGKVKDVYFT 94 (99)
T ss_pred cHHHHHHHHHHHHcCCHHHhcChhhHHHHHHHHHHHHHHhhc-cCcEEEEEEE
Confidence 356777777777664433444557888999999999987654 2234566665
No 473
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=35.62 E-value=1.1e+02 Score=27.35 Aligned_cols=74 Identities=24% Similarity=0.306 Sum_probs=40.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh---hhccCceEEEEeCCCCCcccccCHHHHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA---LADENTVAMVIVNPGNPCGNVFTYQQLQKIA 208 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~---~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~ 208 (421)
++..+++..+. +..+++.+|.+...+.. .+..+.+.+|.+ .++++...+++.+++.+... .+
T Consensus 169 ~~~~~v~~H~a---f~Y~~~~ygl~~~~~~~---~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~~------~~--- 233 (266)
T cd01018 169 KQRAFMVYHPA---WGYFARDYGLTQIPIEE---EGKEPSPADLKRLIDLAKEKGVRVVFVQPQFSTKS------AE--- 233 (266)
T ss_pred CCCeEEEECch---hHHHHHHcCCEEEecCC---CCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCcHH------HH---
Confidence 45667776554 45677889988765421 223355555544 44443333456666544422 22
Q ss_pred HHHHhcCcEEEE
Q 014631 209 EKARKLGIMVIS 220 (421)
Q Consensus 209 ~~~~~~~~~li~ 220 (421)
.++++.|+.++.
T Consensus 234 ~la~~~g~~v~~ 245 (266)
T cd01018 234 AIAREIGAKVVT 245 (266)
T ss_pred HHHHHcCCeEEE
Confidence 455677776553
No 474
>PTZ00187 succinyl-CoA synthetase alpha subunit; Provisional
Probab=35.32 E-value=1.7e+02 Score=27.10 Aligned_cols=78 Identities=12% Similarity=0.124 Sum_probs=47.9
Q ss_pred cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHH-HhcCcE
Q 014631 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA-RKLGIM 217 (421)
Q Consensus 139 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~-~~~~~~ 217 (421)
--|+|.+...+....+.+...+-+++. .-++.++++++.+.+.+++..-..|. .+..++.+++ +++|+.
T Consensus 73 Gvpvy~sv~ea~~~~~~D~avI~VPa~----~v~dai~Ea~~aGI~~~ViiteGfpe------~d~~~l~~~~~~~~g~r 142 (317)
T PTZ00187 73 GLPVFATVKEAKKATGADASVIYVPPP----HAASAIIEAIEAEIPLVVCITEGIPQ------HDMVKVKHALLSQNKTR 142 (317)
T ss_pred CccccCCHHHHhcccCCCEEEEecCHH----HHHHHHHHHHHcCCCEEEEECCCCch------hhHHHHHHHHhhcCCCE
Confidence 678888888888765555444433321 35778888888888887666554432 2233344444 458888
Q ss_pred EEEcccccc
Q 014631 218 VISDEVYDH 226 (421)
Q Consensus 218 li~De~~~~ 226 (421)
+|==.+.+.
T Consensus 143 liGPNc~Gi 151 (317)
T PTZ00187 143 LIGPNCPGI 151 (317)
T ss_pred EECCCCceE
Confidence 875544443
No 475
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=35.18 E-value=33 Score=31.13 Aligned_cols=28 Identities=32% Similarity=0.504 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+.||.|-+.-...
T Consensus 51 ~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 51 MEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhccccccceEEEeeeccccc
Confidence 3999999999999999999998876543
No 476
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=34.85 E-value=1.6e+02 Score=26.58 Aligned_cols=47 Identities=19% Similarity=0.250 Sum_probs=29.2
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...+++. .+..-+..++.++++++.+.+.+.
T Consensus 15 dg~iD~~~~~~~i~~l~~~Gv~gl~v~-GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 15 DGSVDFDALERLIEFQIENGTDGLVVC-GTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEEC-CCCcchhhCCHHHHHHHHHHHHHH
Confidence 44678777766543 344555433 444445667888888888777654
No 477
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=34.58 E-value=1.4e+02 Score=26.82 Aligned_cols=63 Identities=21% Similarity=0.190 Sum_probs=0.0
Q ss_pred eEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
+..+..+-++++.+|.+.+++.+ +.+...+ +++.++.-+..++.++++++++.+.+. ++.+|+
T Consensus 2 ~~a~~TPf~~dg~iD~~~~~~~i~~l~~~Gv~gi-~~~GstGE~~~ls~~Er~~l~~~~~~~~~~~~~vi~ 71 (281)
T cd00408 2 IPALVTPFTADGEVDLDALRRLVEFLIEAGVDGL-VVLGTTGEAPTLTDEERKEVIEAVVEAVAGRVPVIA 71 (281)
T ss_pred CCCeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEE-EECCCCcccccCCHHHHHHHHHHHHHHhCCCCeEEE
No 478
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=34.38 E-value=1.4e+02 Score=27.86 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=44.7
Q ss_pred CCCeEEEcCCCCc-chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC-CCCcccccCHHHHHHHHH
Q 014631 132 PGANILLPKPGFP-LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP-GNPCGNVFTYQQLQKIAE 209 (421)
Q Consensus 132 ~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~ 209 (421)
++.+|++.+.+.- +....+...|+++..+|.+ -+.+++.+. ++++|+++|. .+|.-.. ..+..|.+
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~~------t~~eeIl~~---~pDGiflSNGPGDP~~~~---~~i~~ik~ 245 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPAD------TSAEEILAL---NPDGIFLSNGPGDPAPLD---YAIETIKE 245 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcCC------CCHHHHHhh---CCCEEEEeCCCCChhHHH---HHHHHHHH
Confidence 3557777776664 5666677789999998854 356666543 6778988765 7784433 34555555
Q ss_pred HHH
Q 014631 210 KAR 212 (421)
Q Consensus 210 ~~~ 212 (421)
+..
T Consensus 246 l~~ 248 (368)
T COG0505 246 LLG 248 (368)
T ss_pred Hhc
Confidence 544
No 479
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=34.34 E-value=3e+02 Score=23.68 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=0.0
Q ss_pred hHHHHHHHHHHhccccC-CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-----CCCCCCCCCCCHHHHHHHHHHH
Q 014631 26 TVRSALTIIKQNLKEND-PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-----EFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 26 ~~~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-----~~~~y~~~~g~~~l~~~ia~~l 99 (421)
.+.+++..++++..... +..-+-|+.|.|. ..++.+.+.+...-..+ ..++|.+...+.++...+-.++
T Consensus 20 t~eel~~~~~~~~~f~~~sggGVt~SGGEPl-----lq~~fl~~l~~~~k~~gi~~~leTnG~~~~~~~~~l~~~~D~~l 94 (213)
T PRK10076 20 TLDALEREVMKDDIFFRTSGGGVTLSGGEVL-----MQAEFATRFLQRLRLWGVSCAIETAGDAPASKLLPLAKLCDEVL 94 (213)
T ss_pred CHHHHHHHHHhhhHhhcCCCCEEEEeCchHH-----cCHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHhcCEEE
Q ss_pred hhhCCCCCCCCcE------EEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCH
Q 014631 100 NSELPCKLSPDDV------YLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDL 172 (421)
Q Consensus 100 ~~~~~~~~~~~~i------~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~ 172 (421)
.+-... -+|.+..+-+.--++.+.+.|..|.+ ..++.|. ++..-++
T Consensus 95 -------~DiK~~d~~~~~~~tG~~~~~il~nl~~l~~~g~~v~i--------------------R~~vIPg~nd~~e~i 147 (213)
T PRK10076 95 -------FDLKIMDATQARDVVKMNLPRVLENLRLLVSEGVNVIP--------------------RLPLIPGFTLSRENM 147 (213)
T ss_pred -------EeeccCCHHHHHHHHCCCHHHHHHHHHHHHhCCCcEEE--------------------EEEEECCCCCCHHHH
Q ss_pred HHHHhhhccCceEEEEeCCCCCccc----------------ccCHHHHHHHHHHHHhcCcEEEE
Q 014631 173 DGLEALADENTVAMVIVNPGNPCGN----------------VFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 173 e~l~~~~~~~~~~i~~~~p~nptG~----------------~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
+.+.+.+..-..--+-..|-+|.|. ..+.+.++++.++++++|+.+++
T Consensus 148 ~~ia~~l~~l~~~~~~llpyh~~g~~Ky~~lg~~y~~~~~~~~~~~~l~~~~~~~~~~gl~~~i 211 (213)
T PRK10076 148 QQALDVLIPLGIKQIHLLPFHQYGEPKYRLLGKTWSMKEVPAPSSADVATMREMAERAGFQVTV 211 (213)
T ss_pred HHHHHHHHHcCCceEEEecCCccchhHHHHcCCcCccCCCCCcCHHHHHHHHHHHHHcCCeEEe
No 480
>PF03786 UxuA: D-mannonate dehydratase (UxuA); InterPro: IPR004628 This Fe2+-requiring enzyme plays a role in D-glucuronate catabolism in Escherichia coli. Mannonate dehydratase converts D-mannonate to 2-dehydro-3-deoxy-D-gluconate. An apparent equivalog is found in a glucuronate utilization operon in Bacillus stearothermophilus T-6.; GO: 0008927 mannonate dehydratase activity, 0006064 glucuronate catabolic process; PDB: 1TZ9_A 3FVM_A 3BDK_B 3BAN_B 3DBN_B.
Probab=34.01 E-value=80 Score=29.50 Aligned_cols=39 Identities=18% Similarity=0.423 Sum_probs=26.4
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
+...|+..-++.|.|.+++.++++++.+.+.++|+.+-+
T Consensus 25 Gv~giV~al~~~p~g~~W~~e~i~~~k~~ie~~GL~~~v 63 (351)
T PF03786_consen 25 GVTGIVTALHDIPNGEVWDYEEIRALKERIEAAGLTLSV 63 (351)
T ss_dssp TEEEEEE--SSS-TTS---HHHHHHHHHHHHCTT-EEEE
T ss_pred CCCCeeeCCCCCCCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 455666667789999999999999999999999985543
No 481
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=33.34 E-value=2.9e+02 Score=25.15 Aligned_cols=86 Identities=14% Similarity=0.252 Sum_probs=53.4
Q ss_pred HHHhcCCCCeEEEcCCCCcchHHHHhhcC--ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccc----c
Q 014631 126 LTVLARPGANILLPKPGFPLYEANARHTR--LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV----F 199 (421)
Q Consensus 126 ~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~----~ 199 (421)
...|.+.|..|+++=-+-.......+..| .++.+.+.+. .|.|.+.+.+.....+|=++.-..+|+.. .
T Consensus 78 vnklak~GSQviiPyR~d~~~~r~lkvmGdLGQvl~~~fd~-----~DedSIr~vvk~sNVVINLIGrd~eTknf~f~Dv 152 (391)
T KOG2865|consen 78 VNKLAKMGSQVIIPYRGDEYDPRHLKVMGDLGQVLFMKFDL-----RDEDSIRAVVKHSNVVINLIGRDYETKNFSFEDV 152 (391)
T ss_pred HHHHhhcCCeEEEeccCCccchhheeecccccceeeeccCC-----CCHHHHHHHHHhCcEEEEeeccccccCCcccccc
Confidence 34555788899998433332233333333 2556655543 48889998887655555555566777743 1
Q ss_pred CHHHHHHHHHHHHhcCc
Q 014631 200 TYQQLQKIAEKARKLGI 216 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~ 216 (421)
...--++|+.+|++-|+
T Consensus 153 n~~~aerlAricke~GV 169 (391)
T KOG2865|consen 153 NVHIAERLARICKEAGV 169 (391)
T ss_pred cchHHHHHHHHHHhhCh
Confidence 22446899999999887
No 482
>PF04748 Polysacc_deac_2: Divergent polysaccharide deacetylase; InterPro: IPR006837 This is a family of uncharacterised proteins that includes YibQ.; PDB: 2QV5_A 2NLY_A.
Probab=33.00 E-value=2.7e+02 Score=24.04 Aligned_cols=118 Identities=15% Similarity=0.199 Sum_probs=60.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEE----EcC---CHHHHHHHHHHHhcCCCCeEEEcCCC--CcchHHHHhhcCceeE
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVY----LTA---GCKQAIQVILTVLARPGANILLPKPG--FPLYEANARHTRLEIR 158 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~----~~~---g~~~al~~~~~~l~~~gd~Vl~~~p~--y~~~~~~~~~~g~~~~ 158 (421)
-.++++.+...+.+ -|.-+- .++ ....++..++..|.+.| -..+.+-+ .+-....++..|....
T Consensus 73 ~~~i~~~l~~al~~------vp~a~GvnNhmGS~~T~~~~~m~~vl~~l~~~g-l~FvDS~T~~~s~a~~~A~~~gvp~~ 145 (213)
T PF04748_consen 73 EEEIRKRLEAALAR------VPGAVGVNNHMGSRFTSDREAMRWVLEVLKERG-LFFVDSRTTPRSVAPQVAKELGVPAA 145 (213)
T ss_dssp HHHHHHHHHHHHCC------STT-SEEEEEE-CCHHC-HHHHHHHHHHHHHTT--EEEE-S--TT-SHHHHHHHCT--EE
T ss_pred HHHHHHHHHHHHHH------CCCcEEEecCCCccccCCHHHHHHHHHHHHHcC-CEEEeCCCCcccHHHHHHHHcCCCEE
Confidence 35788888887753 222222 222 23455666666666565 44443322 2334677888888765
Q ss_pred eeeccCCCCccCCHHHHHhhh-------ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 159 HFDLLPEKGWEVDLDGLEALA-------DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 159 ~~~~~~~~~~~~d~e~l~~~~-------~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
...+--++. .+.+.+++.+ +++-.+|.+.+|+-.| .+-|+++..-.++.|+-++
T Consensus 146 ~rdvfLD~~--~~~~~I~~ql~~~~~~A~~~G~aI~Igh~~p~T-----l~~L~~~~~~l~~~gi~lV 206 (213)
T PF04748_consen 146 RRDVFLDND--QDEAAIRRQLDQAARIARKQGSAIAIGHPRPET-----LEALEEWLPELEAQGIELV 206 (213)
T ss_dssp E-SEETTST---SHHHHHHHHHHHHHHHHCCSEEEEEEE-SCCH-----HHHHHHHHHHHHHCTEEE-
T ss_pred eeceecCCC--CCHHHHHHHHHHHHHhhhhcCcEEEEEcCCHHH-----HHHHHHHHhHHhhCCEEEE
Confidence 544332322 4666665544 3456778888887432 2556666666667777665
No 483
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=32.85 E-value=5e+02 Score=26.27 Aligned_cols=87 Identities=16% Similarity=0.146 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc-------hHHHHhhcCceeEee
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL-------YEANARHTRLEIRHF 160 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~-------~~~~~~~~g~~~~~~ 160 (421)
.+++++.|++...- +.|+.|+++.|+.+=...+...+++.|..+-+..+.|.. ....++-.....+..
T Consensus 10 n~~l~~wv~e~~~l-----~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k~~~~~~~rsdp~DvARve~rTfI~s 84 (601)
T PRK04210 10 NPKLLEWVAEVAEL-----TQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEKRPNSFLARSDPSDVARVEDRTFICS 84 (601)
T ss_pred CHHHHHHHHHHHHh-----hCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCCCCceeeccCChhhhhhcccceEEec
Confidence 47888888887753 789999999999999888888888888666654433322 244555444444433
Q ss_pred ec----cCCCCccCCHHHHHhhhc
Q 014631 161 DL----LPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 161 ~~----~~~~~~~~d~e~l~~~~~ 180 (421)
+- .+.++| ++++++.+.+.
T Consensus 85 ~~~~dagp~nnw-~~p~e~~~~l~ 107 (601)
T PRK04210 85 EKEEDAGPTNNW-MDPAEMRETLK 107 (601)
T ss_pred CchhhcCCccCc-CCHHHHHHHHH
Confidence 21 133344 57888877664
No 484
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=32.71 E-value=2.2e+02 Score=21.46 Aligned_cols=90 Identities=17% Similarity=0.133 Sum_probs=45.7
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 202 (421)
.+++.+.+.|=++.... +.....+..|.++..+.-..+++ + .++.+.+.. +..-+++..|. +.-..-...
T Consensus 16 ~~a~~l~~~G~~i~AT~----gTa~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~~~~~ 86 (112)
T cd00532 16 DLAPKLSSDGFPLFATG----GTSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDRCTDE 86 (112)
T ss_pred HHHHHHHHCCCEEEECc----HHHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCcccccCC
Confidence 33333434454444333 22333445666665554322211 2 335555555 44445555553 111001124
Q ss_pred HHHHHHHHHHhcCcEEEEcc
Q 014631 203 QLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De 222 (421)
+-..|.+.|.++++.++.+-
T Consensus 87 dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 87 DGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred ChHHHHHHHHHcCCCEEECH
Confidence 57788999999999999764
No 485
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=32.71 E-value=2.5e+02 Score=22.30 Aligned_cols=94 Identities=16% Similarity=0.164 Sum_probs=44.1
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCC-eEEEcCCC--Ccch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 112 VYLTAGCKQAIQVILTVLARPGA-NILLPKPG--FPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd-~Vl~~~p~--y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
+++|.+++..=..+.+.+.+.|. .|++.... .... .......+.++..++.+.. +.+.+++.++.
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIKR 77 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc-----ccccccccccccccc
Confidence 45555444333334445555554 44444433 1222 2223445677777776532 45555544421
Q ss_pred --CceEEEEeCCCCCcccc--cCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGNV--FTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~~--~~~~~l~~i~~~ 210 (421)
....++.+....+.+.. ++.+++++..++
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhcccc
Confidence 33445444444443433 344556655543
No 486
>cd01020 TroA_b Metal binding protein TroA_b. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=32.70 E-value=1.4e+02 Score=26.57 Aligned_cols=79 Identities=19% Similarity=0.239 Sum_probs=43.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeec---cCCCCccCCHHHHHh---hhccCceEEEEeCCCCCcccccCHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDL---LPEKGWEVDLDGLEA---LADENTVAMVIVNPGNPCGNVFTYQQLQ 205 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~d~e~l~~---~~~~~~~~i~~~~p~nptG~~~~~~~l~ 205 (421)
++..+++. |.++...++.+|.+.+.... ....+..+.+.++.+ .++++...+++.+|+.+. ...+
T Consensus 152 ~~~~~v~~---H~af~Y~~~~yGl~~~~~~~~~~~~~~~~~ps~~~l~~l~~~ik~~~v~~if~e~~~~~------k~~~ 222 (264)
T cd01020 152 KGAPVAAT---EPVFDYLLDALGMKERTPKGYTATTESETEPSPADIAAFQNAIKNRQIDALIVNPQQAS------SATT 222 (264)
T ss_pred CCCeEEEe---CchHHHHHHHCCCcccCHHHHHhhhcCCCCCCHHHHHHHHHHHHhCCCCEEEeCCCCCc------HHHH
Confidence 45567774 44566778889988653210 001122355555544 444443345566666433 4456
Q ss_pred HHHHHHHhcCcEEE
Q 014631 206 KIAEKARKLGIMVI 219 (421)
Q Consensus 206 ~i~~~~~~~~~~li 219 (421)
.+.+++++.|+.++
T Consensus 223 ~l~~la~~~~~~v~ 236 (264)
T cd01020 223 NITGLAKRSGVPVV 236 (264)
T ss_pred HHHHHHHHcCCCEE
Confidence 66677888887654
No 487
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=32.70 E-value=3.2e+02 Score=24.57 Aligned_cols=46 Identities=15% Similarity=0.140 Sum_probs=27.9
Q ss_pred hhhccCceEEEEeCC-CCCcccccCHHHHHHHHHHHH------hcCcEEEEccc
Q 014631 177 ALADENTVAMVIVNP-GNPCGNVFTYQQLQKIAEKAR------KLGIMVISDEV 223 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~ 223 (421)
.....+-..+++-.| .++.- ..-.++++++.+.+. .++.+++.|..
T Consensus 149 ~~~~~~~D~ViIDT~G~~~~d-~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~ 201 (272)
T TIGR00064 149 KAKARNIDVVLIDTAGRLQNK-VNLMDELKKIKRVIKKVDKDAPDEVLLVLDAT 201 (272)
T ss_pred HHHHCCCCEEEEeCCCCCcch-HHHHHHHHHHHHHHhcccCCCCceEEEEEECC
Confidence 333344566666655 44431 111267888888887 67788888875
No 488
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=32.68 E-value=34 Score=31.11 Aligned_cols=27 Identities=11% Similarity=0.212 Sum_probs=22.6
Q ss_pred HHHHHHHHHHH-hcCcEEEEcccccccc
Q 014631 202 QQLQKIAEKAR-KLGIMVISDEVYDHLT 228 (421)
Q Consensus 202 ~~l~~i~~~~~-~~~~~li~De~~~~~~ 228 (421)
.++++|+++|. .++..||+||+|..-.
T Consensus 159 sRl~ql~~W~g~dfdgvivfDEcH~akn 186 (303)
T PF13872_consen 159 SRLDQLVDWCGEDFDGVIVFDECHKAKN 186 (303)
T ss_pred chHHHHHHHHhcCCCceEEeccchhcCC
Confidence 67999999995 5688999999997643
No 489
>PRK08263 short chain dehydrogenase; Provisional
Probab=32.62 E-value=3.2e+02 Score=24.22 Aligned_cols=53 Identities=8% Similarity=-0.014 Sum_probs=25.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
.+++|.++..-=..+...|.+.|..|++..-.-..........+..+..+..+
T Consensus 5 ~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 57 (275)
T PRK08263 5 VWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALD 57 (275)
T ss_pred EEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEcc
Confidence 45666554433344455566778777665433222222222233344555544
No 490
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=32.49 E-value=3.3e+02 Score=23.51 Aligned_cols=96 Identities=22% Similarity=0.313 Sum_probs=46.8
Q ss_pred EEcCCHHHHHHHHHHHhcCCCCeE--E-EcCCC------Cc-----chHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 113 YLTAGCKQAIQVILTVLARPGANI--L-LPKPG------FP-----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 113 ~~~~g~~~al~~~~~~l~~~gd~V--l-~~~p~------y~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
++.+||..+..++..+.. .|..| + +..+. ++ .....++..|.+...+.++.... ...+.+..+
T Consensus 2 vl~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~~~~~--~~~~~l~~~ 78 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALE-EGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETSGEKE--KEVEDLKGA 78 (218)
T ss_pred eeecCcHHHHHHHHHHHH-cCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECCCCCh--HHHHHHHHH
Confidence 566777777777665543 56554 2 22211 11 12355566777766665532111 122223322
Q ss_pred h----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631 179 A----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 179 ~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 218 (421)
+ ..+...++ +|.+.+......+-++|.+.|+.+
T Consensus 79 l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~v~~~~gl~~ 115 (218)
T TIGR03679 79 LKELKREGVEGIV-------TGAIASRYQKSRIERICEELGLKV 115 (218)
T ss_pred HHHHHHcCCCEEE-------ECCcccHhHHHHHHHHHHhCCCeE
Confidence 2 22344443 566655555555556665555443
No 491
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=31.86 E-value=2.9e+02 Score=22.63 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=42.7
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
..+..+...+...|.+++...- .-+-.+.+|.++-+..++...+++.+.. .+...+++..+++|..+++
T Consensus 66 ~a~~~l~~~l~~~Gf~pv~~kG--~~Dv~laIDame~~~~~~iD~~vLvSgD---------~DF~~Lv~~lre~G~~V~v 134 (160)
T TIGR00288 66 YASDKLIEAVVNQGFEPIIVAG--DVDVRMAVEAMELIYNPNIDAVALVTRD---------ADFLPVINKAKENGKETIV 134 (160)
T ss_pred hccHHHHHHHHHCCceEEEecC--cccHHHHHHHHHHhccCCCCEEEEEecc---------HhHHHHHHHHHHCCCEEEE
Confidence 3344556677778887654321 1122344566655555666666654443 5778888888999998886
No 492
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=31.55 E-value=2.6e+02 Score=24.86 Aligned_cols=94 Identities=21% Similarity=0.293 Sum_probs=59.9
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
.|++-.|++++..++-+....+++.++.+.-+|.. ..+...+... + +...+.|.+.+.++++...+ ++.
T Consensus 4 ~ilvlGGT~Dar~la~~L~~~~~~~~~ss~t~~g~--~l~~~~~~~~--~------~G~l~~e~l~~~l~e~~i~l-lID 72 (257)
T COG2099 4 RILLLGGTSDARALAKKLAAAPVDIILSSLTGYGA--KLAEQIGPVR--V------GGFLGAEGLAAFLREEGIDL-LID 72 (257)
T ss_pred eEEEEeccHHHHHHHHHhhccCccEEEEEcccccc--cchhccCCee--e------cCcCCHHHHHHHHHHcCCCE-EEE
Confidence 58888999999988776665566777777766653 2233333211 1 12258899998887654434 344
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.+.|.-..+| +-.++.|++.|+..+
T Consensus 73 ATHPyAa~iS----~Na~~aake~gipy~ 97 (257)
T COG2099 73 ATHPYAARIS----QNAARAAKETGIPYL 97 (257)
T ss_pred CCChHHHHHH----HHHHHHHHHhCCcEE
Confidence 4557665554 445678888888766
No 493
>PRK15452 putative protease; Provisional
Probab=31.52 E-value=1.3e+02 Score=29.31 Aligned_cols=44 Identities=11% Similarity=-0.085 Sum_probs=21.7
Q ss_pred eEEEcCCCCcchHHHHhhcCceeEeeeccCCC----CccCCHHHHHhhh
Q 014631 135 NILLPKPGFPLYEANARHTRLEIRHFDLLPEK----GWEVDLDGLEALA 179 (421)
Q Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~----~~~~d~e~l~~~~ 179 (421)
.++++..+... ...+...|+..+++....-+ ...++.+++++.+
T Consensus 5 eLlapag~~e~-l~aAi~~GADaVY~G~~~~~~R~~~~~f~~edl~eav 52 (443)
T PRK15452 5 ELLSPAGTLKN-MRYAFAYGADAVYAGQPRYSLRVRNNEFNHENLALGI 52 (443)
T ss_pred EEEEECCCHHH-HHHHHHCCCCEEEECCCccchhhhccCCCHHHHHHHH
Confidence 34444443332 33444578888777543111 1124556666654
No 494
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=31.31 E-value=2.9e+02 Score=26.65 Aligned_cols=89 Identities=18% Similarity=0.211 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 117 GCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 117 g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
|+.+...+++..|.+.| ..|.+.+-++.-....+...|+++. .++++.+.+.+ ..++ +++-+-|+
T Consensus 185 GAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~------------~l~el~~~l~~-~DvV-issTsa~~ 250 (414)
T COG0373 185 GAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV------------ALEELLEALAE-ADVV-ISSTSAPH 250 (414)
T ss_pred cccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee------------cHHHHHHhhhh-CCEE-EEecCCCc
Confidence 44455666778888887 8899999999888888888884433 34556555543 2333 33333222
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
.+++.+.++...+.- .+ ++++|=+
T Consensus 251 -~ii~~~~ve~a~~~r--~~-~livDia 274 (414)
T COG0373 251 -PIITREMVERALKIR--KR-LLIVDIA 274 (414)
T ss_pred -cccCHHHHHHHHhcc--cC-eEEEEec
Confidence 345666676665532 23 8888854
No 495
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=31.27 E-value=4.2e+02 Score=24.34 Aligned_cols=105 Identities=18% Similarity=0.154 Sum_probs=57.3
Q ss_pred CCcEEEcCCHHHHHHHHHHHhc--CCC-CeEEE-cCCC--Cc--chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 109 PDDVYLTAGCKQAIQVILTVLA--RPG-ANILL-PKPG--FP--LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~--~~g-d~Vl~-~~p~--y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
....++|-|+.+++.....+.. +-| +.|++ ..+. |. +........|..++.++...+-.-....+.+.+.++
T Consensus 63 g~dTlvT~GgiQSNh~r~tAavA~~lGl~~v~ile~~~~~y~~ngn~Ll~~l~G~~~~~~~~~~d~~~~~~~~~~~e~~~ 142 (323)
T COG2515 63 GADTLVTYGGIQSNHVRQTAAVAAKLGLKCVLILENIEANYLLNGNLLLSKLMGAEVRAVDAGTDIGINASAEELAEEVR 142 (323)
T ss_pred CCcEEEEecccchhHHHHHHHHHHhcCCcEEEEEeccccccccccchhhhhhcCceEEEecCCCChhhchhhHHHHHHHH
Confidence 4467888888888776554432 334 44444 3333 22 234556678888888764322211345566655444
Q ss_pred c--CceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 181 E--NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 181 ~--~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
+ +..-++.....||-|..==.+-..+|.+.+++
T Consensus 143 ~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~ 177 (323)
T COG2515 143 KQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQ 177 (323)
T ss_pred hcCCCCcEeccCCcCccccccHHHHHHHHHHHHhh
Confidence 3 23334444446885544111556666666665
No 496
>PRK07226 fructose-bisphosphate aldolase; Provisional
Probab=31.27 E-value=1.4e+02 Score=26.70 Aligned_cols=47 Identities=21% Similarity=0.334 Sum_probs=27.7
Q ss_pred HHHHHhhhccCceEE-EEeCCCC-CcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 172 LDGLEALADENTVAM-VIVNPGN-PCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i-~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
..+++++++.+...+ +..+..+ .... -.+++.++.+.|+++|+.+++
T Consensus 96 ~~~ve~A~~~Gad~v~~~~~~g~~~~~~--~~~~~~~v~~~~~~~g~pl~v 144 (267)
T PRK07226 96 VGTVEEAIKLGADAVSVHVNVGSETEAE--MLEDLGEVAEECEEWGMPLLA 144 (267)
T ss_pred eecHHHHHHcCCCEEEEEEecCChhHHH--HHHHHHHHHHHHHHcCCcEEE
Confidence 344566666555444 3323221 1222 247788999999999988776
No 497
>PLN00125 Succinyl-CoA ligase [GDP-forming] subunit alpha
Probab=31.22 E-value=1.3e+02 Score=27.45 Aligned_cols=78 Identities=12% Similarity=0.066 Sum_probs=43.7
Q ss_pred cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC-CcccccCHHHHHHHHHHHHhcCcE
Q 014631 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN-PCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 139 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
--|+|.+...+......+...+-++.. .-++.++++...+.+.+++.+... .+| ..+.+.++|+++|+.
T Consensus 54 G~~~y~sv~dlp~~~~~DlAvI~vPa~----~v~~al~e~~~~Gvk~~vIisaGf~e~g------~~~~~~~~ar~~gir 123 (300)
T PLN00125 54 GLPVFNTVAEAKAETKANASVIYVPPP----FAAAAILEAMEAELDLVVCITEGIPQHD------MVRVKAALNRQSKTR 123 (300)
T ss_pred CeeccCCHHHHhhccCCCEEEEecCHH----HHHHHHHHHHHcCCCEEEEECCCCCccc------HHHHHHHHHhhcCCE
Confidence 445666655555431123322222111 246777888888888776655433 344 244555678999999
Q ss_pred EEEcccccc
Q 014631 218 VISDEVYDH 226 (421)
Q Consensus 218 li~De~~~~ 226 (421)
++==.+.+.
T Consensus 124 viGPNc~Gi 132 (300)
T PLN00125 124 LIGPNCPGI 132 (300)
T ss_pred EECCCCcee
Confidence 885555444
No 498
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=31.20 E-value=3.8e+02 Score=23.86 Aligned_cols=42 Identities=26% Similarity=0.294 Sum_probs=26.9
Q ss_pred CHHHHHhhhc-----cC-ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 171 DLDGLEALAD-----EN-TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 171 d~e~l~~~~~-----~~-~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
|.+.+.++++ .+ ...++++.|..+ .. ......+++.|++.|+
T Consensus 50 d~~~l~~a~~~~~~~~g~~d~v~~~~~~~~-~~---~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 50 DEDTWDNPFSSDDGMEPEISAVYLVAPPIP-DL---APPMIKFIDFARSKGV 97 (285)
T ss_pred CHHHHHHHHhcccCcCCceeEEEEeCCCCC-Ch---hHHHHHHHHHHHHcCC
Confidence 6777777663 23 556666666422 11 2556788899999887
No 499
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=31.12 E-value=3.3e+02 Score=23.05 Aligned_cols=98 Identities=19% Similarity=0.309 Sum_probs=55.8
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEE---EcCCC-C-----c-----chHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANIL---LPKPG-F-----P-----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl---~~~p~-y-----~-----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++..+||..+..++..+.. .|..|. +..|. + + .....++..|.+...+.++.++. --.+.+.+
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e--~~~~~l~~ 79 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEE--DEVEDLKE 79 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCch--HHHHHHHH
Confidence 4566888888777775553 454332 12121 1 1 12455677888877776533211 11233333
Q ss_pred hhcc----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 178 LADE----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 178 ~~~~----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.+.+ +...++ +|.+.+......+-++|.+.|+..+
T Consensus 80 ~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 80 LLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred HHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEE
Confidence 3321 234443 7888888888888899999887655
No 500
>PRK06180 short chain dehydrogenase; Provisional
Probab=31.11 E-value=3.6e+02 Score=23.93 Aligned_cols=30 Identities=7% Similarity=-0.021 Sum_probs=18.2
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+++|.++...=..+.+.|.+.|.+|++..
T Consensus 6 ~vlVtGasggiG~~la~~l~~~G~~V~~~~ 35 (277)
T PRK06180 6 TWLITGVSSGFGRALAQAALAAGHRVVGTV 35 (277)
T ss_pred EEEEecCCChHHHHHHHHHHhCcCEEEEEe
Confidence 466666655444445556667787776654
Done!