Query 014631
Match_columns 421
No_of_seqs 179 out of 2325
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 15:03:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 1.5E-54 5.2E-59 417.8 40.1 404 9-419 23-426 (427)
2 1b5p_A Protein (aspartate amin 100.0 7.1E-51 2.4E-55 387.1 39.9 375 17-415 6-383 (385)
3 1bw0_A TAT, protein (tyrosine 100.0 8.9E-51 3E-55 390.6 40.9 402 10-419 4-415 (416)
4 3aow_A Putative uncharacterize 100.0 2.7E-49 9.2E-54 382.8 38.7 382 8-419 48-447 (448)
5 3fvs_A Kynurenine--oxoglutarat 100.0 2.3E-49 7.7E-54 381.5 36.0 378 17-416 8-421 (422)
6 1j32_A Aspartate aminotransfer 100.0 8.2E-49 2.8E-53 373.4 38.9 379 18-417 6-387 (388)
7 3h14_A Aminotransferase, class 100.0 4.7E-49 1.6E-53 375.5 36.4 373 20-420 9-385 (391)
8 3ele_A Amino transferase; RER0 100.0 1.2E-48 4.2E-53 373.5 38.6 378 17-418 6-397 (398)
9 2x5d_A Probable aminotransfera 100.0 2.9E-48 9.8E-53 372.5 38.9 381 19-418 14-399 (412)
10 1gd9_A Aspartate aminotransfer 100.0 6.6E-48 2.2E-52 367.3 41.0 377 17-418 5-387 (389)
11 3b46_A Aminotransferase BNA3; 100.0 1.4E-48 4.9E-53 378.2 34.5 376 22-412 33-442 (447)
12 3jtx_A Aminotransferase; NP_28 100.0 5.5E-48 1.9E-52 368.7 38.0 370 18-414 5-395 (396)
13 1o4s_A Aspartate aminotransfer 100.0 8.7E-48 3E-52 366.3 38.4 369 18-415 17-387 (389)
14 3nra_A Aspartate aminotransfer 100.0 4.8E-48 1.6E-52 370.5 35.8 357 45-418 40-406 (407)
15 3e2y_A Kynurenine-oxoglutarate 100.0 2.5E-48 8.6E-53 372.8 33.1 372 19-412 5-408 (410)
16 3k7y_A Aspartate aminotransfer 100.0 2.1E-48 7E-53 369.8 31.9 369 17-416 6-404 (405)
17 1xi9_A Putative transaminase; 100.0 6.2E-48 2.1E-52 369.5 35.5 386 17-418 14-404 (406)
18 3tcm_A Alanine aminotransferas 100.0 1.2E-47 4E-52 376.0 37.9 370 45-420 65-497 (500)
19 2o1b_A Aminotransferase, class 100.0 2E-48 6.9E-53 372.5 31.3 374 18-417 25-403 (404)
20 3dzz_A Putative pyridoxal 5'-p 100.0 2.3E-47 7.7E-52 363.8 38.0 356 43-418 26-390 (391)
21 3fdb_A Beta C-S lyase, putativ 100.0 5E-48 1.7E-52 366.6 32.2 351 42-417 21-376 (377)
22 2dou_A Probable N-succinyldiam 100.0 1.1E-47 3.8E-52 364.0 33.8 349 42-414 23-375 (376)
23 3kax_A Aminotransferase, class 100.0 3.8E-47 1.3E-51 361.2 37.1 353 42-414 22-382 (383)
24 2o0r_A RV0858C (N-succinyldiam 100.0 2.7E-47 9.1E-52 365.7 36.2 373 19-417 7-396 (411)
25 1u08_A Hypothetical aminotrans 100.0 4.5E-47 1.5E-51 361.1 36.8 349 44-412 30-385 (386)
26 3ihj_A Alanine aminotransferas 100.0 3.7E-47 1.3E-51 371.8 36.3 369 45-420 64-496 (498)
27 1c7n_A Cystalysin; transferase 100.0 7E-47 2.4E-51 361.5 37.2 357 44-420 31-396 (399)
28 3qgu_A LL-diaminopimelate amin 100.0 5E-47 1.7E-51 368.0 36.7 383 17-419 41-442 (449)
29 1yiz_A Kynurenine aminotransfe 100.0 2E-47 7E-52 368.6 33.4 358 44-415 37-427 (429)
30 3ezs_A Aminotransferase ASPB; 100.0 3.3E-47 1.1E-51 360.8 31.8 359 23-417 5-375 (376)
31 2gb3_A Aspartate aminotransfer 100.0 2.9E-46 1E-50 358.2 37.8 378 17-420 18-405 (409)
32 2r2n_A Kynurenine/alpha-aminoa 100.0 3E-47 1E-51 366.7 31.0 375 17-417 9-424 (425)
33 4dq6_A Putative pyridoxal phos 100.0 4.3E-46 1.5E-50 354.9 38.2 351 43-414 31-390 (391)
34 2z61_A Probable aspartate amin 100.0 8.1E-46 2.8E-50 350.5 39.0 361 18-415 5-369 (370)
35 1d2f_A MALY protein; aminotran 100.0 4.6E-46 1.6E-50 354.7 37.5 353 44-417 28-389 (390)
36 1vp4_A Aminotransferase, putat 100.0 9.7E-47 3.3E-51 363.3 31.9 374 19-420 25-421 (425)
37 3l8a_A METC, putative aminotra 100.0 2E-46 6.9E-51 360.6 33.9 353 43-415 60-420 (421)
38 2zc0_A Alanine glyoxylate tran 100.0 1.4E-45 4.8E-50 353.3 39.4 378 19-419 11-406 (407)
39 3ei9_A LL-diaminopimelate amin 100.0 3.7E-46 1.2E-50 360.1 35.5 379 17-416 28-427 (432)
40 3g0t_A Putative aminotransfera 100.0 2.7E-46 9.4E-51 361.6 34.5 373 20-416 21-436 (437)
41 4f4e_A Aromatic-amino-acid ami 100.0 1.6E-46 5.4E-51 361.2 29.5 368 17-414 26-419 (420)
42 1v2d_A Glutamine aminotransfer 100.0 2.3E-45 7.9E-50 348.7 34.3 359 19-419 7-373 (381)
43 2zyj_A Alpha-aminodipate amino 100.0 1.9E-45 6.6E-50 351.2 33.2 366 20-419 15-395 (397)
44 3rq1_A Aminotransferase class 100.0 1.8E-45 6.2E-50 353.8 33.2 376 20-419 14-417 (418)
45 3fsl_A Aromatic-amino-acid ami 100.0 8.2E-46 2.8E-50 353.8 28.6 366 18-413 4-396 (397)
46 3t18_A Aminotransferase class 100.0 3.1E-45 1.1E-49 351.6 31.8 372 21-419 14-412 (413)
47 2x5f_A Aspartate_tyrosine_phen 100.0 1.3E-45 4.6E-50 356.0 28.7 352 43-417 46-429 (430)
48 7aat_A Aspartate aminotransfer 100.0 2.4E-45 8.2E-50 351.0 30.1 373 18-414 6-400 (401)
49 3ffh_A Histidinol-phosphate am 100.0 2.6E-44 8.9E-49 339.3 36.4 333 42-413 30-362 (363)
50 3piu_A 1-aminocyclopropane-1-c 100.0 1.2E-44 4.2E-49 349.7 34.9 362 43-419 37-434 (435)
51 3asa_A LL-diaminopimelate amin 100.0 9.5E-45 3.3E-49 346.6 31.8 368 27-418 16-394 (400)
52 1iay_A ACC synthase 2, 1-amino 100.0 4.2E-44 1.5E-48 345.3 35.4 359 44-417 36-427 (428)
53 3ly1_A Putative histidinol-pho 100.0 4.5E-44 1.6E-48 336.4 34.1 336 41-416 13-351 (354)
54 1ajs_A Aspartate aminotransfer 100.0 7E-45 2.4E-49 349.0 27.9 373 19-417 9-411 (412)
55 3euc_A Histidinol-phosphate am 100.0 2.3E-43 7.8E-48 333.3 36.3 332 43-415 29-366 (367)
56 3get_A Histidinol-phosphate am 100.0 9.5E-44 3.2E-48 335.7 33.2 333 43-414 29-364 (365)
57 3op7_A Aminotransferase class 100.0 1.3E-43 4.6E-48 335.8 32.8 326 69-419 47-373 (375)
58 3meb_A Aspartate aminotransfer 100.0 8.4E-44 2.9E-48 344.6 31.6 373 18-418 27-445 (448)
59 1yaa_A Aspartate aminotransfer 100.0 2E-44 6.8E-49 345.9 26.2 372 19-416 8-410 (412)
60 4h51_A Aspartate aminotransfer 100.0 9.8E-44 3.4E-48 337.5 29.9 375 17-420 22-420 (420)
61 3f6t_A Aspartate aminotransfer 100.0 1.3E-43 4.5E-48 349.3 31.0 373 29-419 82-527 (533)
62 4eu1_A Mitochondrial aspartate 100.0 2.4E-44 8.1E-49 345.0 24.7 367 17-414 18-408 (409)
63 3g7q_A Valine-pyruvate aminotr 100.0 1.5E-43 5E-48 340.4 29.9 372 24-419 14-415 (417)
64 1fg7_A Histidinol phosphate am 100.0 1.1E-42 3.8E-47 327.0 34.1 323 44-413 29-354 (356)
65 3ppl_A Aspartate aminotransfer 100.0 1E-43 3.5E-48 342.4 27.3 350 43-419 32-422 (427)
66 3if2_A Aminotransferase; YP_26 100.0 8.7E-43 3E-47 337.8 33.7 379 20-420 10-443 (444)
67 1lc5_A COBD, L-threonine-O-3-p 100.0 2.7E-42 9.1E-47 325.6 36.0 336 43-418 23-361 (364)
68 3d6k_A Putative aminotransfera 100.0 2E-43 6.9E-48 339.7 28.5 348 45-419 33-420 (422)
69 2q7w_A Aspartate aminotransfer 100.0 3.3E-44 1.1E-48 342.6 22.8 370 19-414 5-396 (396)
70 3ftb_A Histidinol-phosphate am 100.0 5.1E-42 1.7E-46 323.3 37.0 333 42-415 24-359 (361)
71 3b1d_A Betac-S lyase; HET: PLP 100.0 3E-47 1E-51 363.1 0.0 352 44-415 31-391 (392)
72 2zy4_A L-aspartate beta-decarb 100.0 1.2E-42 4.2E-47 342.4 32.6 350 46-418 106-523 (546)
73 3ez1_A Aminotransferase MOCR f 100.0 3E-43 1E-47 338.9 27.0 369 17-419 5-417 (423)
74 2ay1_A Aroat, aromatic amino a 100.0 3.2E-43 1.1E-47 335.5 26.0 368 17-413 3-392 (394)
75 3fkd_A L-threonine-O-3-phospha 100.0 5.2E-41 1.8E-45 315.1 30.9 327 43-418 14-343 (350)
76 3cq5_A Histidinol-phosphate am 100.0 2.2E-40 7.7E-45 313.0 35.4 331 46-415 32-366 (369)
77 3p1t_A Putative histidinol-pho 100.0 1.2E-39 4.1E-44 304.1 36.2 320 43-414 15-334 (337)
78 3bwn_A AT1G70560, L-tryptophan 100.0 5.4E-42 1.8E-46 326.1 19.6 331 42-417 20-387 (391)
79 3hdo_A Histidinol-phosphate am 100.0 1.2E-39 4E-44 307.0 35.0 330 42-417 24-355 (360)
80 2hox_A ALLIIN lyase 1; cystein 100.0 3.4E-41 1.2E-45 323.7 21.2 331 43-416 55-424 (427)
81 1uu1_A Histidinol-phosphate am 100.0 8E-39 2.7E-43 298.3 29.8 316 44-413 19-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 2.3E-37 8E-42 295.3 32.7 337 43-418 42-393 (398)
83 1t3i_A Probable cysteine desul 100.0 1.9E-36 6.6E-41 291.0 30.3 336 43-419 26-415 (420)
84 1kmj_A Selenocysteine lyase; p 100.0 3.9E-36 1.3E-40 287.5 29.4 333 43-417 21-405 (406)
85 1vjo_A Alanine--glyoxylate ami 100.0 4.8E-36 1.6E-40 285.7 28.7 318 61-414 44-392 (393)
86 2dr1_A PH1308 protein, 386AA l 100.0 1.1E-35 3.9E-40 282.4 31.1 323 61-419 30-381 (386)
87 1eg5_A Aminotransferase; PLP-d 100.0 7.5E-35 2.5E-39 276.5 30.2 332 47-419 3-378 (384)
88 3tqx_A 2-amino-3-ketobutyrate 100.0 1E-34 3.5E-39 277.1 31.0 335 43-418 42-397 (399)
89 1elu_A L-cysteine/L-cystine C- 100.0 2.1E-35 7.2E-40 280.9 24.2 330 44-413 15-388 (390)
90 1bs0_A Protein (8-amino-7-oxon 100.0 1.3E-34 4.4E-39 275.0 29.3 327 43-413 38-383 (384)
91 2z9v_A Aspartate aminotransfer 100.0 1.5E-34 5.1E-39 275.3 28.9 332 45-418 8-372 (392)
92 2huf_A Alanine glyoxylate amin 100.0 1.3E-34 4.6E-39 275.7 28.2 332 43-419 17-385 (393)
93 2w8t_A SPT, serine palmitoyltr 100.0 4.6E-34 1.6E-38 274.8 31.6 336 43-419 63-417 (427)
94 2bwn_A 5-aminolevulinate synth 100.0 1.4E-34 4.8E-39 276.3 27.8 335 43-417 45-400 (401)
95 3lvm_A Cysteine desulfurase; s 100.0 2.7E-34 9.4E-39 276.3 28.0 334 42-419 19-401 (423)
96 1fc4_A 2-amino-3-ketobutyrate 100.0 3.4E-34 1.2E-38 273.7 28.1 333 42-418 43-398 (401)
97 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.5E-35 5.2E-40 280.0 18.3 328 43-417 6-370 (371)
98 2ch1_A 3-hydroxykynurenine tra 100.0 4.5E-34 1.5E-38 272.4 27.9 321 61-419 28-385 (396)
99 4eb5_A Probable cysteine desul 100.0 9E-34 3.1E-38 268.9 29.6 332 47-419 2-375 (382)
100 4hvk_A Probable cysteine desul 100.0 1.1E-33 3.7E-38 268.2 30.0 333 47-419 2-375 (382)
101 1sff_A 4-aminobutyrate aminotr 100.0 4.1E-34 1.4E-38 275.4 25.1 348 42-418 39-425 (426)
102 1iug_A Putative aspartate amin 100.0 9.9E-34 3.4E-38 265.6 27.0 317 61-418 11-349 (352)
103 1e5e_A MGL, methionine gamma-l 100.0 2.1E-32 7.2E-37 260.9 36.3 317 46-419 20-397 (404)
104 3cai_A Possible aminotransfera 100.0 2.3E-33 7.7E-38 268.4 28.8 327 45-412 26-404 (406)
105 3kki_A CAI-1 autoinducer synth 100.0 7.1E-33 2.4E-37 265.2 32.1 331 42-417 57-404 (409)
106 3f9t_A TDC, L-tyrosine decarbo 100.0 6.8E-33 2.3E-37 264.0 31.6 320 61-415 41-396 (397)
107 3zrp_A Serine-pyruvate aminotr 100.0 2.2E-33 7.5E-38 266.4 27.8 319 60-418 11-364 (384)
108 1v72_A Aldolase; PLP-dependent 100.0 1.2E-33 4E-38 265.5 24.3 330 43-418 6-354 (356)
109 3nnk_A Ureidoglycine-glyoxylat 100.0 6.4E-33 2.2E-37 265.7 29.6 320 61-418 23-391 (411)
110 1svv_A Threonine aldolase; str 100.0 2.8E-33 9.5E-38 263.2 25.8 332 43-417 12-358 (359)
111 3kgw_A Alanine-glyoxylate amin 100.0 3E-33 1E-37 266.3 26.4 323 61-420 33-391 (393)
112 2yrr_A Aminotransferase, class 100.0 1.5E-33 5E-38 264.4 23.6 318 60-416 9-352 (353)
113 2eh6_A Acoat, acetylornithine 100.0 3.2E-33 1.1E-37 264.5 25.4 327 42-413 26-374 (375)
114 4adb_A Succinylornithine trans 100.0 7.1E-33 2.4E-37 265.0 27.8 341 42-419 37-402 (406)
115 1m32_A 2-aminoethylphosphonate 100.0 8.9E-33 3.1E-37 260.4 28.0 331 45-417 4-365 (366)
116 3isl_A Purine catabolism prote 100.0 1.7E-32 5.7E-37 263.2 29.1 320 61-418 21-391 (416)
117 2ord_A Acoat, acetylornithine 100.0 2.1E-33 7E-38 267.9 21.8 333 42-416 38-396 (397)
118 3i4j_A Aminotransferase, class 100.0 1.5E-32 5E-37 264.8 28.0 356 42-418 27-429 (430)
119 3f0h_A Aminotransferase; RER07 100.0 3.6E-32 1.2E-36 257.4 29.4 331 45-416 19-373 (376)
120 4ffc_A 4-aminobutyrate aminotr 100.0 2.9E-32 9.8E-37 263.9 28.1 357 42-420 62-452 (453)
121 2aeu_A Hypothetical protein MJ 100.0 3.3E-32 1.1E-36 257.0 27.5 330 43-419 26-373 (374)
122 2eo5_A 419AA long hypothetical 100.0 3.3E-32 1.1E-36 261.3 28.0 339 43-417 41-418 (419)
123 1s0a_A Adenosylmethionine-8-am 100.0 6.6E-32 2.2E-36 260.1 29.3 341 42-419 41-426 (429)
124 3ruy_A Ornithine aminotransfer 100.0 1.6E-32 5.3E-37 261.4 24.5 327 42-414 34-391 (392)
125 2pb2_A Acetylornithine/succiny 100.0 4.9E-32 1.7E-36 260.0 27.6 336 42-418 55-419 (420)
126 3vax_A Putative uncharacterize 100.0 9.8E-34 3.3E-38 270.4 15.7 337 43-416 18-399 (400)
127 3nx3_A Acoat, acetylornithine 100.0 1.3E-31 4.4E-36 255.3 30.0 335 42-416 34-394 (395)
128 3ffr_A Phosphoserine aminotran 100.0 1.1E-31 3.7E-36 252.6 29.1 327 45-414 4-361 (362)
129 3gju_A Putative aminotransfera 100.0 1.7E-31 5.8E-36 259.3 30.9 357 42-420 49-459 (460)
130 3dxv_A Alpha-amino-epsilon-cap 100.0 9.2E-32 3.1E-36 259.9 28.9 352 42-418 41-426 (439)
131 2dkj_A Serine hydroxymethyltra 100.0 8.2E-32 2.8E-36 257.7 27.0 339 44-416 23-387 (407)
132 1jg8_A L-ALLO-threonine aldola 100.0 3.1E-32 1.1E-36 255.0 23.0 328 43-417 2-346 (347)
133 3n5m_A Adenosylmethionine-8-am 100.0 6.9E-32 2.4E-36 261.6 25.9 351 42-416 47-451 (452)
134 1zod_A DGD, 2,2-dialkylglycine 100.0 1E-31 3.6E-36 259.0 27.1 350 43-417 42-432 (433)
135 1b9h_A AHBA synthase, protein 100.0 4.1E-31 1.4E-35 251.2 30.7 314 64-416 17-387 (388)
136 1vef_A Acetylornithine/acetyl- 100.0 6.1E-32 2.1E-36 257.6 24.2 336 43-414 44-394 (395)
137 4a6r_A Omega transaminase; tra 100.0 2.7E-31 9.3E-36 257.8 29.1 353 42-419 48-451 (459)
138 2oga_A Transaminase; PLP-depen 100.0 1.4E-31 4.8E-36 255.3 26.2 326 44-418 30-397 (399)
139 2bkw_A Alanine-glyoxylate amin 100.0 1.2E-31 4E-36 254.6 23.2 330 44-417 4-384 (385)
140 2ez2_A Beta-tyrosinase, tyrosi 100.0 1.1E-30 3.7E-35 253.7 30.3 325 61-418 55-432 (456)
141 3oks_A 4-aminobutyrate transam 100.0 2.2E-31 7.4E-36 257.7 25.2 353 42-416 59-450 (451)
142 3l44_A Glutamate-1-semialdehyd 100.0 3.8E-31 1.3E-35 255.2 26.3 349 42-420 53-433 (434)
143 3a9z_A Selenocysteine lyase; P 100.0 4.3E-31 1.5E-35 254.7 25.9 335 43-419 16-430 (432)
144 1w23_A Phosphoserine aminotran 100.0 9E-32 3.1E-36 253.1 20.3 323 45-416 3-359 (360)
145 2po3_A 4-dehydrase; external a 100.0 5.6E-30 1.9E-34 246.2 32.3 335 41-417 11-386 (424)
146 2c0r_A PSAT, phosphoserine ami 100.0 1.4E-31 4.8E-36 252.0 20.7 325 45-417 4-361 (362)
147 3tfu_A Adenosylmethionine-8-am 100.0 4E-31 1.4E-35 255.7 22.8 342 42-418 71-454 (457)
148 3i5t_A Aminotransferase; pyrid 100.0 3.3E-30 1.1E-34 250.7 29.0 349 42-420 52-457 (476)
149 2rfv_A Methionine gamma-lyase; 100.0 1.3E-29 4.6E-34 241.5 32.7 318 48-413 24-396 (398)
150 3dod_A Adenosylmethionine-8-am 100.0 2E-30 6.8E-35 251.0 27.3 349 42-419 42-445 (448)
151 3a8u_X Omega-amino acid--pyruv 100.0 1.9E-30 6.6E-35 251.3 27.1 348 42-417 48-447 (449)
152 3mad_A Sphingosine-1-phosphate 100.0 6.2E-30 2.1E-34 251.8 30.7 329 64-419 110-471 (514)
153 1z7d_A Ornithine aminotransfer 100.0 4.2E-30 1.4E-34 247.4 28.6 332 42-419 63-431 (433)
154 1ax4_A Tryptophanase; tryptoph 100.0 8.7E-31 3E-35 255.1 23.8 331 64-418 55-442 (467)
155 2oat_A Ornithine aminotransfer 100.0 1.1E-29 3.9E-34 244.7 30.3 330 43-416 75-438 (439)
156 2c81_A Glutamine-2-deoxy-scyll 100.0 2.2E-29 7.4E-34 241.7 32.0 323 61-419 13-416 (418)
157 1qz9_A Kynureninase; kynurenin 100.0 6.5E-30 2.2E-34 245.2 28.1 320 44-417 27-402 (416)
158 3mc6_A Sphingosine-1-phosphate 100.0 5.6E-30 1.9E-34 251.3 28.1 334 61-419 75-439 (497)
159 1rv3_A Serine hydroxymethyltra 100.0 5.3E-30 1.8E-34 249.7 27.2 346 44-416 44-430 (483)
160 3hmu_A Aminotransferase, class 100.0 5.5E-30 1.9E-34 248.6 27.2 349 42-418 53-453 (472)
161 3n0l_A Serine hydroxymethyltra 100.0 1.6E-29 5.3E-34 242.6 29.9 339 45-417 26-389 (417)
162 3uwc_A Nucleotide-sugar aminot 100.0 9E-30 3.1E-34 240.7 27.0 324 43-417 5-371 (374)
163 3e9k_A Kynureninase; kynurenin 100.0 3.9E-30 1.3E-34 250.2 24.7 333 44-418 66-462 (465)
164 3k28_A Glutamate-1-semialdehyd 100.0 5.8E-30 2E-34 246.4 24.3 343 42-418 51-428 (429)
165 1ibj_A CBL, cystathionine beta 100.0 3.5E-30 1.2E-34 248.7 21.9 327 44-416 89-461 (464)
166 1mdo_A ARNB aminotransferase; 100.0 3.4E-29 1.2E-33 238.3 28.3 324 45-418 9-387 (393)
167 3pj0_A LMO0305 protein; struct 100.0 2.5E-30 8.7E-35 243.1 20.2 329 43-413 12-358 (359)
168 3lws_A Aromatic amino acid bet 100.0 2.3E-30 8E-35 243.2 19.9 299 80-414 41-356 (357)
169 2cy8_A D-phgat, D-phenylglycin 100.0 1.9E-29 6.6E-34 244.5 25.1 333 43-419 56-437 (453)
170 3ecd_A Serine hydroxymethyltra 100.0 1.6E-28 5.4E-33 236.2 31.3 338 45-417 33-397 (425)
171 1wyu_B Glycine dehydrogenase s 100.0 4.4E-29 1.5E-33 242.9 27.2 334 44-416 66-440 (474)
172 2fnu_A Aminotransferase; prote 100.0 2.5E-28 8.6E-33 230.8 30.9 314 61-418 10-373 (375)
173 2epj_A Glutamate-1-semialdehyd 100.0 2.7E-29 9.2E-34 242.2 24.3 337 42-418 54-432 (434)
174 3fq8_A Glutamate-1-semialdehyd 100.0 5.5E-29 1.9E-33 239.6 25.6 345 42-416 50-426 (427)
175 2dgk_A GAD-beta, GADB, glutama 100.0 2.9E-28 1E-32 236.0 30.8 337 61-419 53-436 (452)
176 2e7u_A Glutamate-1-semialdehyd 100.0 6.5E-29 2.2E-33 238.8 25.0 333 42-414 50-424 (424)
177 2cjg_A L-lysine-epsilon aminot 100.0 1.8E-29 6.1E-34 244.1 21.0 334 43-417 53-448 (449)
178 3h7f_A Serine hydroxymethyltra 100.0 1.4E-28 4.8E-33 237.8 26.9 337 45-417 46-414 (447)
179 2vi8_A Serine hydroxymethyltra 100.0 1.1E-28 3.8E-33 235.7 25.3 332 44-417 24-387 (405)
180 4e77_A Glutamate-1-semialdehyd 100.0 7.1E-29 2.4E-33 238.9 23.9 345 42-416 51-428 (429)
181 3frk_A QDTB; aminotransferase, 100.0 3.6E-29 1.2E-33 236.5 21.1 313 62-418 15-369 (373)
182 3dr4_A Putative perosamine syn 100.0 2.1E-28 7.3E-33 232.7 26.5 322 43-414 21-390 (391)
183 2fyf_A PSAT, phosphoserine ami 100.0 2E-28 6.8E-33 233.5 26.0 326 44-416 39-397 (398)
184 1gc0_A Methionine gamma-lyase; 100.0 1.7E-27 5.8E-32 226.9 31.6 283 84-413 63-397 (398)
185 3hbx_A GAD 1, glutamate decarb 100.0 1.3E-27 4.4E-32 233.8 31.2 367 27-419 39-446 (502)
186 3gbx_A Serine hydroxymethyltra 100.0 6.4E-28 2.2E-32 231.6 27.1 329 62-417 42-396 (420)
187 3nyt_A Aminotransferase WBPE; 100.0 2.7E-28 9.1E-33 230.0 22.2 305 61-413 13-360 (367)
188 1cs1_A CGS, protein (cystathio 100.0 5.3E-27 1.8E-31 222.6 31.2 283 84-412 50-382 (386)
189 1pff_A Methionine gamma-lyase; 100.0 2.9E-27 1E-31 219.7 28.2 277 90-413 2-330 (331)
190 3ndn_A O-succinylhomoserine su 100.0 1.5E-27 5.2E-32 227.3 26.7 285 88-414 83-413 (414)
191 2okj_A Glutamate decarboxylase 100.0 8.4E-27 2.9E-31 228.8 32.4 330 68-417 111-502 (504)
192 2cb1_A O-acetyl homoserine sul 100.0 1.6E-26 5.3E-31 221.1 32.8 308 60-412 32-411 (412)
193 3ke3_A Putative serine-pyruvat 100.0 4E-28 1.4E-32 229.7 21.1 299 90-419 35-378 (379)
194 2oqx_A Tryptophanase; lyase, p 100.0 7.2E-29 2.5E-33 241.6 16.4 330 64-418 53-443 (467)
195 2qma_A Diaminobutyrate-pyruvat 100.0 2.5E-27 8.4E-32 232.2 26.3 338 61-417 111-496 (497)
196 1o69_A Aminotransferase; struc 100.0 1.3E-26 4.4E-31 220.6 29.5 312 62-416 10-386 (394)
197 1js3_A DDC;, DOPA decarboxylas 100.0 2E-27 7E-32 232.3 23.9 334 62-419 86-476 (486)
198 3qhx_A Cystathionine gamma-syn 100.0 2.6E-26 8.9E-31 217.9 30.2 283 86-413 66-390 (392)
199 1qgn_A Protein (cystathionine 100.0 1.9E-26 6.4E-31 220.9 29.2 284 87-416 115-444 (445)
200 3acz_A Methionine gamma-lyase; 100.0 2.2E-26 7.5E-31 218.4 28.4 282 85-415 58-387 (389)
201 3vp6_A Glutamate decarboxylase 100.0 6.5E-26 2.2E-30 222.1 32.0 337 63-417 109-505 (511)
202 2a7v_A Serine hydroxymethyltra 100.0 3.9E-26 1.3E-30 220.3 29.0 345 45-416 55-440 (490)
203 1n8p_A Cystathionine gamma-lya 100.0 1.3E-26 4.3E-31 220.0 25.0 283 86-413 55-391 (393)
204 3cog_A Cystathionine gamma-lya 100.0 1.2E-26 4.2E-31 220.8 24.3 211 85-334 66-283 (403)
205 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.8E-25 6E-30 215.6 31.1 315 62-415 41-434 (437)
206 3ju7_A Putative PLP-dependent 99.9 4.1E-26 1.4E-30 215.2 25.6 314 60-416 12-374 (377)
207 3ri6_A O-acetylhomoserine sulf 99.9 8.6E-26 3E-30 215.7 27.4 291 85-414 81-429 (430)
208 4e1o_A HDC, histidine decarbox 99.9 1.3E-25 4.3E-30 218.7 27.5 332 63-419 92-480 (481)
209 1ohv_A 4-aminobutyrate aminotr 99.9 4E-26 1.4E-30 221.7 21.5 341 42-417 61-471 (472)
210 2z67_A O-phosphoseryl-tRNA(SEC 99.9 3.4E-26 1.2E-30 221.5 21.0 299 88-414 131-455 (456)
211 2jis_A Cysteine sulfinic acid 99.9 2.2E-24 7.5E-29 212.0 34.1 340 62-416 120-514 (515)
212 2fq6_A Cystathionine beta-lyas 99.9 2.3E-25 7.9E-30 212.1 26.2 284 87-412 83-413 (415)
213 3k40_A Aromatic-L-amino-acid d 99.9 2E-25 6.9E-30 216.7 26.0 343 63-421 87-475 (475)
214 2x3l_A ORN/Lys/Arg decarboxyla 99.9 3.2E-26 1.1E-30 220.8 18.7 291 84-417 55-353 (446)
215 2yky_A Beta-transaminase; tran 99.9 1.7E-28 5.9E-33 235.4 0.0 336 42-419 98-462 (465)
216 3b8x_A WBDK, pyridoxamine 5-ph 99.9 1.2E-23 4E-28 199.9 30.5 307 61-410 12-389 (390)
217 3nmy_A Xometc, cystathionine g 99.9 5.4E-24 1.8E-28 201.9 27.9 283 87-415 68-397 (400)
218 1wyu_A Glycine dehydrogenase ( 99.9 2.4E-24 8.2E-29 207.7 25.2 324 46-414 66-437 (438)
219 2ctz_A O-acetyl-L-homoserine s 99.9 1.7E-23 5.9E-28 200.4 30.9 289 88-414 60-420 (421)
220 3e77_A Phosphoserine aminotran 99.9 3.6E-24 1.2E-28 199.7 23.5 326 60-417 22-375 (377)
221 3m5u_A Phosphoserine aminotran 99.9 2E-23 6.9E-28 194.1 25.8 322 44-417 4-360 (361)
222 3qm2_A Phosphoserine aminotran 99.9 8E-24 2.7E-28 198.6 21.7 329 47-417 28-385 (386)
223 1c4k_A Protein (ornithine deca 99.9 4.2E-23 1.4E-27 207.7 26.8 313 84-418 171-567 (730)
224 3jzl_A Putative cystathionine 99.9 1.4E-22 4.9E-27 191.8 25.4 270 64-376 32-338 (409)
225 3hvy_A Cystathionine beta-lyas 99.9 1.6E-22 5.6E-27 192.0 25.1 254 64-355 47-340 (427)
226 3i16_A Aluminum resistance pro 99.9 1.7E-22 5.8E-27 191.9 23.9 247 86-372 73-352 (427)
227 2vyc_A Biodegradative arginine 99.9 3E-22 1E-26 203.4 27.0 308 88-417 207-605 (755)
228 3ht4_A Aluminum resistance pro 99.9 1.7E-22 5.8E-27 193.0 22.9 252 92-372 67-341 (431)
229 4ao9_A Beta-phenylalanine amin 99.9 2E-21 6.8E-26 185.1 26.5 340 41-420 84-449 (454)
230 4e3q_A Pyruvate transaminase; 99.9 1.8E-20 6E-25 180.1 31.6 353 41-420 64-471 (473)
231 4atq_A 4-aminobutyrate transam 99.9 3E-20 1E-24 177.8 27.6 352 42-417 62-455 (456)
232 3n75_A LDC, lysine decarboxyla 99.9 1.3E-19 4.4E-24 180.9 27.1 307 84-417 193-560 (715)
233 4a0g_A Adenosylmethionine-8-am 99.8 2.8E-19 9.5E-24 182.9 17.9 347 45-418 381-829 (831)
234 3ou5_A Serine hydroxymethyltra 99.8 6.4E-17 2.2E-21 149.5 29.0 333 61-415 65-439 (490)
235 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 1.2E-17 4.3E-22 155.0 23.5 312 91-421 118-465 (501)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 1.4E-16 4.9E-21 150.1 22.0 315 88-420 96-446 (450)
237 3gh5_A HEX1, beta-hexosaminida 77.5 12 0.00041 35.9 9.7 110 106-219 127-273 (525)
238 1ofu_X SULA, hypothetical prot 72.3 27 0.00092 25.8 10.0 99 111-217 6-112 (119)
239 4fgs_A Probable dehydrogenase 71.5 14 0.00046 32.1 7.8 96 111-211 31-134 (273)
240 1oft_A SULA, hypothetical prot 70.6 37 0.0012 26.7 10.4 99 111-217 48-154 (161)
241 3rwb_A TPLDH, pyridoxal 4-dehy 65.1 31 0.0011 29.0 8.8 95 110-209 7-109 (247)
242 4dqx_A Probable oxidoreductase 63.5 34 0.0011 29.5 8.9 96 109-209 27-130 (277)
243 2gjx_A Beta-hexosaminidase alp 63.3 22 0.00076 33.9 8.1 106 107-220 98-233 (507)
244 3tpc_A Short chain alcohol deh 61.5 40 0.0014 28.5 8.9 95 110-209 8-114 (257)
245 3m1a_A Putative dehydrogenase; 60.9 38 0.0013 29.0 8.8 95 110-209 6-108 (281)
246 4e6p_A Probable sorbitol dehyd 59.4 41 0.0014 28.4 8.7 95 110-209 9-111 (259)
247 3rjz_A N-type ATP pyrophosphat 58.3 77 0.0026 26.7 9.7 99 111-219 7-120 (237)
248 3grp_A 3-oxoacyl-(acyl carrier 57.4 38 0.0013 28.9 8.1 96 109-209 27-130 (266)
249 3gvc_A Oxidoreductase, probabl 57.3 37 0.0013 29.2 8.0 95 110-209 30-132 (277)
250 2o23_A HADH2 protein; HSD17B10 57.1 80 0.0027 26.5 10.2 65 110-179 13-77 (265)
251 3rd5_A Mypaa.01249.C; ssgcid, 56.1 25 0.00084 30.5 6.7 67 109-180 16-82 (291)
252 3tzq_B Short-chain type dehydr 55.5 75 0.0026 27.0 9.7 95 110-209 12-116 (271)
253 4g81_D Putative hexonate dehyd 55.0 69 0.0024 27.3 9.1 97 109-210 9-116 (255)
254 3e2i_A Thymidine kinase; Zn-bi 54.9 31 0.001 28.7 6.5 103 118-236 42-147 (219)
255 4eso_A Putative oxidoreductase 54.4 51 0.0018 27.8 8.4 95 110-210 9-112 (255)
256 3h7a_A Short chain dehydrogena 54.3 90 0.0031 26.2 9.9 96 109-209 7-112 (252)
257 1now_A Beta-hexosaminidase bet 53.9 34 0.0012 32.7 7.6 24 196-219 214-237 (507)
258 3op4_A 3-oxoacyl-[acyl-carrier 53.3 56 0.0019 27.4 8.4 95 110-209 10-112 (248)
259 3ppi_A 3-hydroxyacyl-COA dehyd 53.3 44 0.0015 28.6 7.9 65 110-179 31-95 (281)
260 3l6e_A Oxidoreductase, short-c 52.9 46 0.0016 27.7 7.7 95 111-210 5-107 (235)
261 1vhx_A Putative holliday junct 52.2 27 0.00093 27.0 5.6 59 168-226 40-102 (150)
262 3n74_A 3-ketoacyl-(acyl-carrie 52.2 68 0.0023 27.0 8.9 96 109-209 9-113 (261)
263 3guy_A Short-chain dehydrogena 52.2 34 0.0012 28.3 6.7 95 111-210 3-102 (230)
264 1bqc_A Protein (beta-mannanase 50.9 30 0.001 30.2 6.4 22 201-222 64-85 (302)
265 4hp8_A 2-deoxy-D-gluconate 3-d 50.8 72 0.0025 27.0 8.5 96 111-211 11-110 (247)
266 3ged_A Short-chain dehydrogena 50.7 68 0.0023 27.1 8.4 93 111-210 4-105 (247)
267 1jak_A Beta-N-acetylhexosamini 50.7 26 0.0009 33.4 6.3 110 107-220 104-249 (512)
268 2ew8_A (S)-1-phenylethanol deh 49.7 1.1E+02 0.0038 25.4 9.9 95 110-209 8-111 (249)
269 3l5o_A Uncharacterized protein 49.4 25 0.00084 30.4 5.3 74 132-215 140-213 (270)
270 3gem_A Short chain dehydrogena 48.7 71 0.0024 27.0 8.4 94 109-209 27-127 (260)
271 2yv1_A Succinyl-COA ligase [AD 48.6 47 0.0016 29.0 7.2 50 171-226 83-132 (294)
272 3mwd_B ATP-citrate synthase; A 48.5 38 0.0013 30.3 6.6 77 141-227 65-143 (334)
273 2gjh_A Designed protein; oblig 47.6 42 0.0014 19.9 4.6 27 391-417 3-30 (62)
274 2nu8_A Succinyl-COA ligase [AD 47.6 28 0.00097 30.3 5.6 50 171-226 77-126 (288)
275 1hdc_A 3-alpha, 20 beta-hydrox 47.5 91 0.0031 26.1 8.8 95 110-209 6-108 (254)
276 1hxh_A 3BETA/17BETA-hydroxyste 46.8 1.1E+02 0.0036 25.6 9.2 95 110-209 7-109 (253)
277 4ibo_A Gluconate dehydrogenase 46.4 1E+02 0.0034 26.3 9.0 96 109-209 26-132 (271)
278 1x1t_A D(-)-3-hydroxybutyrate 46.1 1.2E+02 0.0043 25.3 9.6 94 111-209 6-112 (260)
279 4gkb_A 3-oxoacyl-[acyl-carrier 46.1 1.4E+02 0.0047 25.4 9.8 95 111-210 9-112 (258)
280 3pxx_A Carveol dehydrogenase; 46.1 55 0.0019 28.0 7.4 96 110-210 11-127 (287)
281 4dyv_A Short-chain dehydrogena 45.9 77 0.0026 27.1 8.2 94 111-209 30-132 (272)
282 3lyl_A 3-oxoacyl-(acyl-carrier 45.9 1E+02 0.0035 25.5 8.9 95 110-209 6-111 (247)
283 3ak4_A NADH-dependent quinucli 45.6 1.1E+02 0.0039 25.6 9.2 95 110-209 13-115 (263)
284 3tfo_A Putative 3-oxoacyl-(acy 45.3 1.1E+02 0.0038 25.9 9.1 94 111-209 6-110 (264)
285 3l77_A Short-chain alcohol deh 45.3 1.1E+02 0.0039 25.0 9.0 94 111-209 4-109 (235)
286 4fn4_A Short chain dehydrogena 45.2 85 0.0029 26.7 8.1 95 111-210 9-115 (254)
287 4fc7_A Peroxisomal 2,4-dienoyl 45.0 1.2E+02 0.0042 25.7 9.4 96 110-210 28-135 (277)
288 1c7s_A Beta-N-acetylhexosamini 44.2 66 0.0023 32.8 8.2 113 107-219 266-417 (858)
289 1vl8_A Gluconate 5-dehydrogena 43.9 1.2E+02 0.004 25.7 9.0 96 110-210 22-129 (267)
290 3f9i_A 3-oxoacyl-[acyl-carrier 43.3 65 0.0022 26.8 7.2 69 108-181 13-81 (249)
291 1i4n_A Indole-3-glycerol phosp 42.8 36 0.0012 29.0 5.3 48 168-221 109-156 (251)
292 2yvq_A Carbamoyl-phosphate syn 42.7 1.1E+02 0.0037 23.2 10.3 103 112-221 27-131 (143)
293 3gaf_A 7-alpha-hydroxysteroid 42.5 98 0.0034 26.0 8.3 96 109-209 12-117 (256)
294 3rkr_A Short chain oxidoreduct 41.9 1.4E+02 0.0047 25.1 9.2 95 110-209 30-136 (262)
295 3rih_A Short chain dehydrogena 41.5 1.7E+02 0.0058 25.2 10.1 97 109-210 41-149 (293)
296 2yv2_A Succinyl-COA synthetase 41.5 48 0.0016 29.0 6.1 50 171-226 84-133 (297)
297 3r1i_A Short-chain type dehydr 41.2 1.7E+02 0.0057 24.9 9.7 97 108-209 31-138 (276)
298 3ai3_A NADPH-sorbose reductase 41.2 1.5E+02 0.005 24.9 9.3 65 110-179 8-76 (263)
299 1uls_A Putative 3-oxoacyl-acyl 41.2 1.4E+02 0.0049 24.7 9.1 94 110-210 6-107 (245)
300 1nff_A Putative oxidoreductase 41.2 1.3E+02 0.0044 25.3 8.8 95 110-209 8-110 (260)
301 3sju_A Keto reductase; short-c 40.9 1.1E+02 0.0038 26.1 8.5 94 111-209 26-130 (279)
302 2pnf_A 3-oxoacyl-[acyl-carrier 40.7 1.5E+02 0.0052 24.3 9.2 96 109-209 7-114 (248)
303 3tjr_A Short chain dehydrogena 40.6 1.3E+02 0.0045 26.0 9.0 95 110-209 32-137 (301)
304 1geg_A Acetoin reductase; SDR 40.4 1.2E+02 0.004 25.4 8.4 93 112-209 5-108 (256)
305 2j9r_A Thymidine kinase; TK1, 39.9 77 0.0026 26.2 6.7 103 118-236 42-147 (214)
306 3t7c_A Carveol dehydrogenase; 39.8 1.6E+02 0.0055 25.4 9.4 96 109-209 28-147 (299)
307 4b79_A PA4098, probable short- 39.5 1.4E+02 0.0048 25.1 8.5 91 111-210 13-106 (242)
308 2cfc_A 2-(R)-hydroxypropyl-COM 39.3 1E+02 0.0036 25.5 7.9 64 111-179 4-71 (250)
309 3dqp_A Oxidoreductase YLBE; al 39.0 1.5E+02 0.0052 23.8 8.9 93 112-215 3-97 (219)
310 4dmm_A 3-oxoacyl-[acyl-carrier 38.9 96 0.0033 26.3 7.7 97 109-210 28-136 (269)
311 2jah_A Clavulanic acid dehydro 38.7 1.5E+02 0.0051 24.6 8.8 95 110-209 8-113 (247)
312 3sc4_A Short chain dehydrogena 38.6 1.8E+02 0.0063 24.7 10.5 97 109-210 9-123 (285)
313 2wsb_A Galactitol dehydrogenas 38.5 1.4E+02 0.0048 24.7 8.7 95 109-208 11-113 (254)
314 3imf_A Short chain dehydrogena 38.2 1.6E+02 0.0055 24.6 8.9 96 110-210 7-113 (257)
315 2wkj_A N-acetylneuraminate lya 38.1 1.2E+02 0.0041 26.5 8.2 54 166-220 25-85 (303)
316 2rhc_B Actinorhodin polyketide 37.8 1.5E+02 0.0051 25.2 8.8 95 110-209 23-128 (277)
317 4gqr_A Pancreatic alpha-amylas 37.2 22 0.00077 33.4 3.6 31 194-227 72-102 (496)
318 3io5_A Recombination and repai 36.9 1.2E+02 0.0041 26.9 7.8 103 118-224 42-172 (333)
319 3a28_C L-2.3-butanediol dehydr 36.9 1.3E+02 0.0044 25.2 8.1 94 111-209 4-110 (258)
320 3ozo_A N-acetylglucosaminidase 36.8 43 0.0015 32.4 5.4 24 196-219 250-273 (572)
321 2a4k_A 3-oxoacyl-[acyl carrier 36.6 1.3E+02 0.0043 25.5 8.0 65 110-179 7-71 (263)
322 3tsc_A Putative oxidoreductase 36.4 1.1E+02 0.0038 25.9 7.7 95 110-209 12-130 (277)
323 1zk4_A R-specific alcohol dehy 36.3 1.7E+02 0.0057 24.1 8.8 31 110-140 7-37 (251)
324 1iuk_A Hypothetical protein TT 36.3 66 0.0022 24.4 5.5 22 205-226 107-128 (140)
325 3awd_A GOX2181, putative polyo 36.2 1.8E+02 0.0061 24.1 9.0 65 110-179 14-81 (260)
326 3uve_A Carveol dehydrogenase ( 36.0 1.1E+02 0.0038 26.1 7.7 32 109-140 11-42 (286)
327 3qlj_A Short chain dehydrogena 35.9 1.4E+02 0.0049 26.0 8.5 96 110-210 28-144 (322)
328 2ae2_A Protein (tropinone redu 35.9 1.9E+02 0.0065 24.1 9.6 95 110-209 10-116 (260)
329 3sx2_A Putative 3-ketoacyl-(ac 35.9 1.7E+02 0.0058 24.7 8.9 31 110-140 14-44 (278)
330 4imr_A 3-oxoacyl-(acyl-carrier 35.8 2E+02 0.0069 24.3 9.5 100 108-209 32-138 (275)
331 1fmc_A 7 alpha-hydroxysteroid 35.7 1.9E+02 0.0063 23.9 9.6 95 109-208 11-115 (255)
332 3v2h_A D-beta-hydroxybutyrate 35.6 2E+02 0.0067 24.5 9.2 95 110-209 26-133 (281)
333 2uvd_A 3-oxoacyl-(acyl-carrier 35.6 1.9E+02 0.0064 23.9 8.9 94 111-209 6-111 (246)
334 1yht_A DSPB; beta barrel, hydr 35.6 55 0.0019 29.6 5.7 70 148-219 40-112 (367)
335 2e8y_A AMYX protein, pullulana 35.4 17 0.00057 36.6 2.4 28 201-228 315-342 (718)
336 3nyw_A Putative oxidoreductase 35.2 1.1E+02 0.0038 25.5 7.4 33 110-142 8-40 (250)
337 1iy8_A Levodione reductase; ox 35.1 1.9E+02 0.0064 24.3 8.9 65 110-179 14-83 (267)
338 3s55_A Putative short-chain de 35.0 2.1E+02 0.0071 24.2 9.4 95 110-209 11-128 (281)
339 1hjs_A Beta-1,4-galactanase; 4 34.9 2.2E+02 0.0076 25.1 9.5 37 192-228 50-86 (332)
340 4egf_A L-xylulose reductase; s 34.8 1.8E+02 0.006 24.5 8.7 95 110-209 21-127 (266)
341 2fp4_A Succinyl-COA ligase [GD 34.8 39 0.0013 29.7 4.4 52 171-228 84-136 (305)
342 3pff_A ATP-citrate synthase; p 33.9 71 0.0024 32.5 6.6 77 141-227 551-629 (829)
343 3is3_A 17BETA-hydroxysteroid d 33.8 1.1E+02 0.0039 25.8 7.3 96 110-210 19-126 (270)
344 3bzy_B ESCU; auto cleavage pro 33.7 24 0.00081 24.2 2.2 23 202-224 27-49 (83)
345 4h1h_A LMO1638 protein; MCCF-l 33.7 98 0.0033 27.4 6.9 78 130-207 9-103 (327)
346 1oi7_A Succinyl-COA synthetase 33.5 51 0.0017 28.7 4.9 51 171-227 77-127 (288)
347 2al1_A Enolase 1, 2-phospho-D- 33.4 60 0.0021 30.2 5.7 96 118-220 275-371 (436)
348 3uuw_A Putative oxidoreductase 33.3 1.1E+02 0.0039 26.4 7.4 28 199-226 101-128 (308)
349 3qiv_A Short-chain dehydrogena 33.2 2.1E+02 0.007 23.7 9.2 66 109-179 9-77 (253)
350 3dmy_A Protein FDRA; predicted 33.1 42 0.0015 31.7 4.6 73 140-223 21-94 (480)
351 2ya0_A Putative alkaline amylo 33.0 27 0.00091 35.1 3.4 27 201-227 254-280 (714)
352 1yb1_A 17-beta-hydroxysteroid 32.9 1.8E+02 0.0063 24.5 8.5 66 109-179 31-99 (272)
353 3l21_A DHDPS, dihydrodipicolin 32.9 1.7E+02 0.0058 25.6 8.3 54 166-220 29-89 (304)
354 3ucx_A Short chain dehydrogena 32.7 1.7E+02 0.006 24.5 8.3 96 110-210 12-119 (264)
355 3pgx_A Carveol dehydrogenase; 32.7 1.4E+02 0.0048 25.4 7.8 31 110-140 16-46 (280)
356 2yl5_A Beta-N-acetylhexosamini 32.6 35 0.0012 31.9 3.9 27 193-219 86-112 (442)
357 2c07_A 3-oxoacyl-(acyl-carrier 32.6 2.3E+02 0.0078 24.0 9.9 94 111-209 46-150 (285)
358 1ae1_A Tropinone reductase-I; 32.6 2.2E+02 0.0077 23.9 9.4 95 110-209 22-128 (273)
359 1pq4_A Periplasmic binding pro 32.6 83 0.0029 27.3 6.2 72 132-219 189-264 (291)
360 3cxt_A Dehydrogenase with diff 32.4 1.9E+02 0.0064 24.9 8.5 95 110-209 35-140 (291)
361 3kvo_A Hydroxysteroid dehydrog 32.4 2.7E+02 0.0091 24.7 11.0 95 110-209 46-158 (346)
362 2d59_A Hypothetical protein PH 32.3 1.6E+02 0.0054 22.2 7.1 44 172-225 91-134 (144)
363 3pk0_A Short-chain dehydrogena 31.7 1.8E+02 0.0061 24.4 8.2 96 109-209 10-117 (262)
364 1w6u_A 2,4-dienoyl-COA reducta 31.5 2.2E+02 0.0074 24.3 8.9 95 110-209 27-133 (302)
365 3tla_A MCCF; serine protease, 31.4 1.4E+02 0.0047 27.0 7.6 78 130-207 40-134 (371)
366 3tl3_A Short-chain type dehydr 31.2 98 0.0034 25.9 6.4 61 111-179 11-71 (257)
367 3zv4_A CIS-2,3-dihydrobiphenyl 31.0 1.6E+02 0.0054 25.1 7.8 65 110-179 6-70 (281)
368 3dii_A Short-chain dehydrogena 30.7 1.9E+02 0.0067 23.9 8.2 94 111-210 4-105 (247)
369 3asu_A Short-chain dehydrogena 30.6 1.6E+02 0.0055 24.5 7.6 64 112-180 3-66 (248)
370 2yl6_A Beta-N-acetylhexosamini 30.6 35 0.0012 31.8 3.6 26 194-219 84-109 (434)
371 2z1n_A Dehydrogenase; reductas 30.6 2.3E+02 0.008 23.5 9.7 31 110-140 8-38 (260)
372 3oec_A Carveol dehydrogenase ( 30.5 2.6E+02 0.0089 24.2 9.3 95 110-209 47-164 (317)
373 3tsm_A IGPS, indole-3-glycerol 30.5 1.1E+02 0.0036 26.4 6.3 49 168-222 128-176 (272)
374 3ftp_A 3-oxoacyl-[acyl-carrier 30.5 2.2E+02 0.0074 24.1 8.5 95 110-209 29-134 (270)
375 1g94_A Alpha-amylase; beta-alp 30.4 32 0.0011 32.1 3.4 28 201-228 64-91 (448)
376 3o38_A Short chain dehydrogena 30.4 1.9E+02 0.0064 24.2 8.1 97 109-210 22-131 (266)
377 2ki0_A DS119; beta-alpha-beta, 30.3 29 0.00099 18.3 1.6 19 200-218 13-31 (36)
378 1yxm_A Pecra, peroxisomal tran 30.2 2.6E+02 0.0088 23.9 9.2 95 110-209 19-129 (303)
379 1spx_A Short-chain reductase f 30.2 1.5E+02 0.0053 25.0 7.6 30 111-140 8-37 (278)
380 1xky_A Dihydrodipicolinate syn 30.2 98 0.0034 27.0 6.3 47 167-214 27-77 (301)
381 4e5s_A MCCFLIKE protein (BA_56 30.2 1.6E+02 0.0055 26.1 7.7 78 130-207 9-103 (331)
382 3dz1_A Dihydrodipicolinate syn 30.1 1.3E+02 0.0043 26.5 7.0 54 166-220 22-81 (313)
383 3cpr_A Dihydrodipicolinate syn 30.0 1.7E+02 0.0058 25.5 7.8 53 166-219 30-89 (304)
384 1qys_A TOP7; alpha-beta, novel 29.9 1E+02 0.0034 20.4 4.6 28 390-417 46-74 (106)
385 3ijr_A Oxidoreductase, short c 29.9 2.6E+02 0.0089 23.8 9.8 96 110-210 48-156 (291)
386 3oid_A Enoyl-[acyl-carrier-pro 29.7 2.5E+02 0.0084 23.5 9.1 94 111-209 6-111 (258)
387 2q2v_A Beta-D-hydroxybutyrate 29.7 2.4E+02 0.0082 23.4 10.2 94 111-209 6-108 (255)
388 1xkq_A Short-chain reductase f 29.3 2.3E+02 0.008 23.9 8.6 31 110-140 7-37 (280)
389 3osu_A 3-oxoacyl-[acyl-carrier 29.2 2.4E+02 0.0082 23.2 9.2 94 111-209 6-111 (246)
390 3edm_A Short chain dehydrogena 29.2 2.5E+02 0.0085 23.4 9.8 96 109-210 8-117 (259)
391 1edo_A Beta-keto acyl carrier 29.1 2.3E+02 0.008 23.1 8.8 93 112-209 4-108 (244)
392 3enk_A UDP-glucose 4-epimerase 29.1 2.8E+02 0.0097 24.0 9.5 101 111-216 7-121 (341)
393 3u9l_A 3-oxoacyl-[acyl-carrier 28.8 2.6E+02 0.0088 24.4 8.9 94 111-209 7-116 (324)
394 2ehd_A Oxidoreductase, oxidore 28.6 2.3E+02 0.008 22.9 8.3 30 111-140 7-36 (234)
395 3v8b_A Putative dehydrogenase, 28.6 2.4E+02 0.0082 24.0 8.5 95 110-209 29-135 (283)
396 4a29_A Engineered retro-aldol 28.5 52 0.0018 28.0 3.9 81 135-224 81-161 (258)
397 1xq1_A Putative tropinone redu 28.5 2.6E+02 0.0087 23.3 9.0 95 110-209 15-121 (266)
398 1fob_A Beta-1,4-galactanase; B 28.5 3.1E+02 0.01 24.2 9.9 76 146-228 11-86 (334)
399 3v2g_A 3-oxoacyl-[acyl-carrier 28.3 2.7E+02 0.0092 23.5 9.6 98 108-210 30-139 (271)
400 3tox_A Short chain dehydrogena 28.3 2.7E+02 0.0094 23.6 9.2 94 111-209 10-115 (280)
401 1xhl_A Short-chain dehydrogena 28.1 2.4E+02 0.0082 24.2 8.5 32 110-141 27-58 (297)
402 2dtx_A Glucose 1-dehydrogenase 28.0 2.5E+02 0.0084 23.5 8.4 87 110-209 9-103 (264)
403 3e96_A Dihydrodipicolinate syn 27.9 1.3E+02 0.0046 26.4 6.8 53 167-220 27-86 (316)
404 2b4q_A Rhamnolipids biosynthes 27.9 2.6E+02 0.0091 23.6 8.7 32 110-141 30-61 (276)
405 1ht6_A AMY1, alpha-amylase iso 27.8 41 0.0014 30.9 3.6 28 201-228 68-95 (405)
406 3m5v_A DHDPS, dihydrodipicolin 27.8 1.3E+02 0.0046 26.1 6.7 53 167-220 22-82 (301)
407 3tha_A Tryptophan synthase alp 27.8 2.2E+02 0.0076 24.1 7.8 155 42-220 40-204 (252)
408 2vt1_B Surface presentation of 27.7 34 0.0012 24.0 2.2 24 202-225 27-50 (93)
409 3ezl_A Acetoacetyl-COA reducta 27.5 2.2E+02 0.0074 23.6 8.0 95 110-209 14-120 (256)
410 3gdg_A Probable NADP-dependent 27.5 1.9E+02 0.0066 24.1 7.7 97 108-209 19-130 (267)
411 2bgk_A Rhizome secoisolaricire 27.4 2.7E+02 0.0093 23.2 8.8 31 110-140 17-47 (278)
412 3i6i_A Putative leucoanthocyan 27.4 1.7E+02 0.0057 25.7 7.5 95 110-219 11-115 (346)
413 1zem_A Xylitol dehydrogenase; 27.4 2.7E+02 0.0092 23.2 9.0 95 110-209 8-114 (262)
414 2bd0_A Sepiapterin reductase; 27.4 2.1E+02 0.0072 23.4 7.8 93 112-209 5-115 (244)
415 1lwj_A 4-alpha-glucanotransfer 27.3 42 0.0014 31.2 3.5 27 201-227 69-95 (441)
416 1ud2_A Amylase, alpha-amylase; 27.3 42 0.0014 31.7 3.6 27 201-227 80-106 (480)
417 1xp8_A RECA protein, recombina 27.3 2.3E+02 0.0079 25.5 8.4 16 204-219 190-205 (366)
418 3t4x_A Oxidoreductase, short c 27.3 2.7E+02 0.0094 23.2 9.4 96 109-209 10-114 (267)
419 1y80_A Predicted cobalamin bin 27.1 2E+02 0.007 23.2 7.4 58 147-215 109-167 (210)
420 1hvx_A Alpha-amylase; hydrolas 27.0 42 0.0014 32.0 3.6 27 201-227 81-107 (515)
421 3s5o_A 4-hydroxy-2-oxoglutarat 27.0 1.6E+02 0.0053 25.8 7.0 54 166-220 28-88 (307)
422 1pii_A N-(5'phosphoribosyl)ant 26.9 82 0.0028 29.4 5.3 48 168-221 116-163 (452)
423 1mxg_A Alpha amylase; hyperthe 26.8 44 0.0015 31.1 3.6 27 201-227 86-112 (435)
424 3bh4_A Alpha-amylase; calcium, 26.8 43 0.0015 31.6 3.6 27 201-227 78-104 (483)
425 1iv0_A Hypothetical protein; r 26.6 81 0.0028 22.2 4.1 57 169-225 37-96 (98)
426 3sxp_A ADP-L-glycero-D-mannohe 26.3 3.3E+02 0.011 23.9 11.2 106 108-219 9-134 (362)
427 4aie_A Glucan 1,6-alpha-glucos 26.3 43 0.0015 32.0 3.6 26 201-226 79-104 (549)
428 3t7y_A YOP proteins translocat 26.3 33 0.0011 24.3 1.9 23 202-224 42-64 (97)
429 1wpc_A Glucan 1,4-alpha-maltoh 26.2 45 0.0015 31.5 3.6 27 201-227 82-108 (485)
430 3e03_A Short chain dehydrogena 26.1 2.9E+02 0.01 23.2 10.6 96 109-209 6-119 (274)
431 4iin_A 3-ketoacyl-acyl carrier 25.9 2.9E+02 0.01 23.1 10.1 98 107-209 27-136 (271)
432 2akz_A Gamma enolase, neural; 25.7 83 0.0028 29.3 5.2 92 119-220 273-368 (439)
433 4dzz_A Plasmid partitioning pr 25.7 2.4E+02 0.0084 22.1 7.7 46 120-165 63-108 (206)
434 2ya1_A Putative alkaline amylo 25.6 40 0.0014 35.3 3.3 27 201-227 561-587 (1014)
435 3rku_A Oxidoreductase YMR226C; 25.5 2E+02 0.0068 24.6 7.4 94 111-210 35-146 (287)
436 2q5c_A NTRC family transcripti 25.5 2.4E+02 0.0083 22.6 7.4 23 116-140 36-58 (196)
437 1wza_A Alpha-amylase A; hydrol 25.4 51 0.0017 31.1 3.8 27 201-227 81-107 (488)
438 2zcu_A Uncharacterized oxidore 25.3 3E+02 0.01 23.0 8.6 92 112-216 2-96 (286)
439 3sr3_A Microcin immunity prote 25.3 2.1E+02 0.0072 25.4 7.6 78 130-207 10-104 (336)
440 3c01_E Surface presentation of 25.3 35 0.0012 24.2 1.9 24 202-225 27-50 (98)
441 3lkv_A Uncharacterized conserv 25.2 3.2E+02 0.011 23.4 10.4 126 83-223 49-177 (302)
442 3bk2_A RNAse J, metal dependen 25.2 1.8E+02 0.0061 28.0 7.7 78 131-216 337-423 (562)
443 2guy_A Alpha-amylase A; (beta- 25.1 48 0.0017 31.2 3.6 28 201-228 97-124 (478)
444 3dhn_A NAD-dependent epimerase 25.1 2.7E+02 0.0091 22.3 8.5 95 111-215 6-103 (227)
445 2z1k_A (NEO)pullulanase; hydro 25.1 48 0.0017 31.1 3.6 27 201-227 96-122 (475)
446 2x9g_A PTR1, pteridine reducta 25.0 2.4E+02 0.0081 24.0 7.9 54 111-164 25-83 (288)
447 1jae_A Alpha-amylase; glycosid 24.9 44 0.0015 31.5 3.2 28 201-228 74-101 (471)
448 2b8t_A Thymidine kinase; deoxy 24.9 1.2E+02 0.004 25.2 5.5 96 118-227 26-128 (223)
449 2v9d_A YAGE; dihydrodipicolini 24.9 3.5E+02 0.012 24.0 9.0 33 111-144 102-138 (343)
450 1xx6_A Thymidine kinase; NESG, 24.8 1.3E+02 0.0046 24.0 5.7 95 118-226 22-119 (191)
451 3qfe_A Putative dihydrodipicol 24.7 3.5E+02 0.012 23.6 10.0 33 111-144 82-118 (318)
452 3qja_A IGPS, indole-3-glycerol 24.7 1.4E+02 0.0047 25.7 6.0 48 168-221 121-168 (272)
453 2h1q_A Hypothetical protein; Z 24.7 1.5E+02 0.0051 25.5 6.2 72 132-213 140-211 (270)
454 2hq1_A Glucose/ribitol dehydro 24.7 2.7E+02 0.0092 22.7 8.0 65 110-179 6-74 (247)
455 3hr8_A Protein RECA; alpha and 24.6 1.6E+02 0.0056 26.4 6.8 18 203-220 176-193 (356)
456 3l21_A DHDPS, dihydrodipicolin 24.6 1.8E+02 0.0061 25.4 6.9 34 111-145 86-123 (304)
457 3s5o_A 4-hydroxy-2-oxoglutarat 24.6 3.5E+02 0.012 23.5 9.9 51 89-144 66-121 (307)
458 3b4u_A Dihydrodipicolinate syn 24.6 1.8E+02 0.0061 25.2 6.9 47 167-214 18-68 (294)
459 2yxg_A DHDPS, dihydrodipicolin 24.5 3.2E+02 0.011 23.5 8.5 32 112-144 72-107 (289)
460 3afn_B Carbonyl reductase; alp 24.5 2.9E+02 0.01 22.6 9.8 95 110-209 8-115 (258)
461 1gcy_A Glucan 1,4-alpha-maltot 24.5 50 0.0017 31.6 3.6 28 201-228 92-119 (527)
462 1w3i_A EDA, 2-keto-3-deoxy glu 24.5 1.7E+02 0.0059 25.3 6.8 47 167-214 14-64 (293)
463 1yo6_A Putative carbonyl reduc 24.4 2.9E+02 0.0098 22.5 10.0 94 111-209 5-111 (250)
464 3o63_A Probable thiamine-phosp 24.4 99 0.0034 26.1 5.0 52 172-224 46-105 (243)
465 3vnd_A TSA, tryptophan synthas 24.4 2.1E+02 0.0073 24.4 7.2 93 123-220 113-211 (267)
466 3svt_A Short-chain type dehydr 24.4 3E+02 0.01 23.2 8.4 96 109-209 11-121 (281)
467 3faw_A Reticulocyte binding pr 24.3 47 0.0016 34.2 3.4 27 201-227 369-395 (877)
468 3flu_A DHDPS, dihydrodipicolin 24.2 1.7E+02 0.0058 25.4 6.7 57 157-214 12-72 (297)
469 3ff4_A Uncharacterized protein 24.2 1.1E+02 0.0037 22.6 4.6 39 172-220 72-110 (122)
470 3ruf_A WBGU; rossmann fold, UD 24.0 3.6E+02 0.012 23.4 11.2 102 109-216 25-143 (351)
471 1ja9_A 4HNR, 1,3,6,8-tetrahydr 23.9 3.1E+02 0.011 22.7 8.6 65 110-179 22-90 (274)
472 2aaa_A Alpha-amylase; glycosid 23.8 50 0.0017 31.1 3.4 28 201-228 97-124 (484)
473 3si9_A DHDPS, dihydrodipicolin 23.8 1.8E+02 0.006 25.6 6.7 54 166-220 36-96 (315)
474 3lf2_A Short chain oxidoreduct 23.8 3.2E+02 0.011 22.8 9.4 97 109-210 8-117 (265)
475 2es9_A Putative cytoplasmic pr 23.7 25 0.00086 24.3 0.9 82 64-147 10-98 (115)
476 3u5t_A 3-oxoacyl-[acyl-carrier 23.6 3.3E+02 0.011 22.8 8.7 95 110-210 28-135 (267)
477 1f6k_A N-acetylneuraminate lya 23.6 2E+02 0.0067 24.9 7.0 52 167-219 18-77 (293)
478 2r8w_A AGR_C_1641P; APC7498, d 23.5 2E+02 0.0068 25.5 7.1 53 167-220 49-108 (332)
479 3si9_A DHDPS, dihydrodipicolin 23.5 3.7E+02 0.013 23.5 10.3 27 117-144 102-129 (315)
480 2dh2_A 4F2 cell-surface antige 23.5 60 0.002 30.0 3.8 28 201-228 81-108 (424)
481 1ua7_A Alpha-amylase; beta-alp 23.5 67 0.0023 29.6 4.1 28 201-228 74-101 (422)
482 2nuw_A 2-keto-3-deoxygluconate 23.4 2.6E+02 0.0091 24.0 7.8 50 89-145 51-104 (288)
483 2whl_A Beta-mannanase, baman5; 23.4 54 0.0019 28.4 3.3 23 200-222 62-84 (294)
484 3dhu_A Alpha-amylase; structur 23.4 55 0.0019 30.5 3.6 28 200-227 82-109 (449)
485 2nuw_A 2-keto-3-deoxygluconate 23.3 1.7E+02 0.0058 25.3 6.4 47 167-214 14-64 (288)
486 1wjw_A Phosphoacetylglucosamin 23.0 2E+02 0.007 20.6 5.9 38 378-418 59-97 (112)
487 4f6o_A Metacaspase-1; rossmann 22.8 1.3E+02 0.0045 26.9 5.7 57 85-143 70-138 (350)
488 3gi1_A LBP, laminin-binding pr 22.7 1.5E+02 0.0052 25.5 6.1 75 132-219 178-255 (286)
489 1h5q_A NADP-dependent mannitol 22.6 3.2E+02 0.011 22.5 9.1 30 111-140 16-45 (265)
490 1gee_A Glucose 1-dehydrogenase 22.6 3.2E+02 0.011 22.5 8.4 95 110-209 8-114 (261)
491 4dpp_A DHDPS 2, dihydrodipicol 22.5 2.8E+02 0.0097 24.9 7.8 54 166-220 73-133 (360)
492 1o5k_A DHDPS, dihydrodipicolin 22.4 3.8E+02 0.013 23.2 8.9 33 111-144 83-119 (306)
493 3tak_A DHDPS, dihydrodipicolin 22.4 1.8E+02 0.0062 25.1 6.5 53 167-220 16-75 (291)
494 2kfp_A Pspto_3016 protein; alp 22.3 1.3E+02 0.0043 22.3 4.7 38 370-409 72-111 (125)
495 2ojp_A DHDPS, dihydrodipicolin 22.3 1.7E+02 0.0059 25.3 6.3 47 167-214 16-66 (292)
496 3fkr_A L-2-keto-3-deoxyarabona 22.2 1.2E+02 0.0039 26.7 5.2 57 161-220 19-82 (309)
497 3daq_A DHDPS, dihydrodipicolin 22.2 2.7E+02 0.0093 24.0 7.6 34 111-145 73-110 (292)
498 3qtp_A Enolase 1; glycolysis, 22.1 87 0.003 29.1 4.4 94 118-220 281-378 (441)
499 3ksu_A 3-oxoacyl-acyl carrier 22.0 3.4E+02 0.012 22.6 11.0 97 109-210 11-121 (262)
500 3un1_A Probable oxidoreductase 22.0 3.1E+02 0.011 22.8 7.9 89 110-209 29-125 (260)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=1.5e-54 Score=417.76 Aligned_cols=404 Identities=35% Similarity=0.723 Sum_probs=333.0
Q ss_pred cccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCC
Q 014631 9 KWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGI 88 (421)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 88 (421)
.|.+.++ ++.+.++++|+++++.++.+ ...+.++|+|+.|.|.....+++++.+++++.+.+.......|++..|+
T Consensus 23 ~w~~~~~--~~~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~ 98 (427)
T 3dyd_A 23 MWSVRPS--DMAKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIGF 98 (427)
T ss_dssp -CCCCCC--C----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTCC
T ss_pred ccCcchh--hHhhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCCc
Confidence 4776665 45556677899998877643 3457789999999987655678999999999999987656689999999
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCc
Q 014631 89 LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGW 168 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 168 (421)
.++|++++++++.. +.++++++|++|+|+++|+..++..+.++||+|++++|+|.++...++..|.+++.++.++++++
T Consensus 99 ~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 177 (427)
T 3dyd_A 99 LSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKSW 177 (427)
T ss_dssp HHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGTT
T ss_pred HHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCC
Confidence 99999999999765 66678899999999999999999999999999999999999999999999999999998776778
Q ss_pred cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
.+|++++++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+++.+++..+.++..++.+.++++
T Consensus 178 ~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi~ 257 (427)
T 3dyd_A 178 EIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPILS 257 (427)
T ss_dssp EECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEEE
T ss_pred CCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEEE
Confidence 89999999999888999999999999999999999999999999999999999999999988877767777776677899
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
++||||.|+++|+|+||++++++.... .+++.+.+......+.+++++.+.++.++|+.....++++.+++++++++.+
T Consensus 258 ~~S~sK~~~~~G~riG~~~~~~~~~~~-~~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~l 336 (427)
T 3dyd_A 258 CGGLAKRWLVPGWRLGWILIHDRRDIF-GNEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADLC 336 (427)
T ss_dssp EEESTTTSSCGGGCCEEEEEECSTTSS-HHHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH
T ss_pred EeeccccCCCcCcceEEEEecCcchhh-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999997643222 1346666665543346889999999999998545678889999999999999
Q ss_pred HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHH
Q 014631 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLG 408 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~ 408 (421)
.+.|+++|++. +..|.+++|+|+.++....+...++.+++..+++++||.+.||..|+.++++|++++.++++++++++
T Consensus 337 ~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l~ 415 (427)
T 3dyd_A 337 YGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEACS 415 (427)
T ss_dssp HHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHHH
T ss_pred HHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHHH
Confidence 99999988988 44789999999988754332223567888888878999999999998889999999999999999999
Q ss_pred HHHHHHHHhhh
Q 014631 409 RIKAFCQRHAK 419 (421)
Q Consensus 409 ~l~~~~~~~~~ 419 (421)
+|.++++++++
T Consensus 416 ~l~~~l~~~~~ 426 (427)
T 3dyd_A 416 RIQEFCEQHYH 426 (427)
T ss_dssp HHHHHHHHHCC
T ss_pred HHHHHHHHhhc
Confidence 99999988763
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=7.1e-51 Score=387.09 Aligned_cols=375 Identities=21% Similarity=0.384 Sum_probs=316.0
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..++.++.+.++++....++... .++++|+|+.|.|. ++.++.+.+++.+.+... ...|++..|.+++|++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia 78 (385)
T 1b5p_A 6 RRVQAMKPSATVAVNAKALELRR--QGVDLVALTAGEPD----FDTPEHVKEAARRALAQG-KTKYAPPAGIPELREALA 78 (385)
T ss_dssp HHHHHCCCCHHHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred hHHhhcCcchHHHHHHHHHHHHh--cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence 45667777888887776654332 36789999999875 466789999999888764 347988889999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
++++..+|..+++++|++|+|+++++++++++++++||+|+++.|+|.++...++..|.+++.+++++++++.+|+++++
T Consensus 79 ~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 158 (385)
T 1b5p_A 79 EKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPERVR 158 (385)
T ss_dssp HHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHHHH
T ss_pred HHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHHHH
Confidence 99999888888899999999999999999999999999999999999999999999999999999875557789999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
+.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++ ...++..++. +++++++||||.|
T Consensus 159 ~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK~~ 236 (385)
T 1b5p_A 159 RAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAKAF 236 (385)
T ss_dssp TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTTTT
T ss_pred HhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechhhc
Confidence 9998888999999999999999999999999999999999999999999988866 4445555554 6799999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhcc--chhHHHHHHHHHHHHHHHHHHHhh
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNT--KEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
+++|+|+||++++ +++++.+..... .+.+++.+.|.++.++|+.. ...++++.+++++++++.+.+.|+
T Consensus 237 ~~~G~RiG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 308 (385)
T 1b5p_A 237 AMTGWRIGYACGP--------KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEGLT 308 (385)
T ss_dssp TCGGGCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEeC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999985 356677666543 23577889999988888641 246688889999999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++ |+. +..|.+++|+|+.++... .+..++...++ ++||.+.||..|+.++++|+|++++++++++++++|.++
T Consensus 309 ~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~~~ 381 (385)
T 1b5p_A 309 AL-GLK-AVRPSGAFYVLMDTSPIA----PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFARV 381 (385)
T ss_dssp HH-TCC-BCCCSBTTEEEEECTTTC----SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGGGG
T ss_pred HC-CCe-ecCCCeeEEEEEecCCCC----CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 87 887 457888899998886311 24667777775 789999999998777899999999999999999999877
Q ss_pred HH
Q 014631 414 CQ 415 (421)
Q Consensus 414 ~~ 415 (421)
++
T Consensus 382 l~ 383 (385)
T 1b5p_A 382 LG 383 (385)
T ss_dssp C-
T ss_pred Hh
Confidence 64
No 3
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=8.9e-51 Score=390.58 Aligned_cols=402 Identities=32% Similarity=0.598 Sum_probs=326.1
Q ss_pred ccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCH
Q 014631 10 WGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGIL 89 (421)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~ 89 (421)
|.+..+ . ......+.++.+...+... ....++|+|+.|.|..++.+++++.+.+++.+.+.......|++..|..
T Consensus 4 ~~~~~~-~-~~~~~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~ 78 (416)
T 1bw0_A 4 WDVSMS-N-HAGLVFNPIRTVSDNAKPS---PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 78 (416)
T ss_dssp CCCCCC-H-HHHTCCCHHHHHHHTCCCC---CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred cccCch-h-hhhccccHHHHHHHHHHHh---hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence 777666 3 3333345677766543321 1236799999999875445788999999999998875556898888999
Q ss_pred HHHHHHHHHHhh------hCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 90 PARRAIADYLNS------ELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 90 ~l~~~ia~~l~~------~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
++|+++++++++ ..|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++++
T Consensus 79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 158 (416)
T 1bw0_A 79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR 158 (416)
T ss_dssp HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence 999999999983 25656788999999999999999999999999999999999999999999999999999986
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC----Ccccccc
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST----PYVRMGV 239 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~ 239 (421)
+++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++|. ...++..
T Consensus 159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 238 (416)
T 1bw0_A 159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238 (416)
T ss_dssp GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence 655678999999999988889999999999999999999999999999999999999999999888776 4455555
Q ss_pred cCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
++..+++++++|+||.|+++|+|+||++++++.... ..+...+........+++++.+.++.++|+.....++++..+
T Consensus 239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 316 (416)
T 1bw0_A 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNG--PSFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA 316 (416)
T ss_dssp SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSC--HHHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhH--HHHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHH
Confidence 555556899999999999999999999997641122 123333333322235788899999999997544678889999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~ 399 (421)
+++++++++.+.|+++|++. +..|.+++|+|+.++....++..+..+++..+++++||.+.||..|+.++++|++++.+
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~ 395 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRP 395 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSC
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCC
Confidence 99999999999999888888 44678899999888643211112466777777778899999999888788999999989
Q ss_pred HHHHHHHHHHHHHHHHHhhh
Q 014631 400 PSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~~~ 419 (421)
++++++++++|.+++++.++
T Consensus 396 ~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 396 VEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999988654
No 4
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=2.7e-49 Score=382.77 Aligned_cols=382 Identities=21% Similarity=0.334 Sum_probs=318.1
Q ss_pred ccccCCCchhHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCC
Q 014631 8 KKWGFQVKQEHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPS 85 (421)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~ 85 (421)
..|...++ ...+.++++.++.+..... ++++|+|+.|.|.. .+.+++.+.+++.+.++.. ....|++.
T Consensus 48 ~~~~~~~s-~~~~~~~~s~~~~~~~~~~-------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~ 117 (448)
T 3aow_A 48 GDVERFFS-KKALEMRASEVRELLKLVE-------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT 117 (448)
T ss_dssp SCGGGGCC-HHHHHCCCCHHHHHHHHHH-------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred cchHHHhh-HHHhcCCCcHHHHHHHhcc-------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence 34776667 5667777888998887554 56799999999873 2346788999999888753 13479888
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 165 (421)
.|.+++|+++++++.+.+|.+ ++++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.++.+++
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 196 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 196 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence 899999999999997777766 7899999999999999999999999999999999999999999999999999988642
Q ss_pred CCccCCHHHHHhhhc----c--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631 166 KGWEVDLDGLEALAD----E--NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 238 (421)
++|++++++.++ + ++++| ++++|+||||.++|.+++++|+++|++||++||+||+|+.+.++|....++.
T Consensus 197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK 273 (448)
T ss_dssp ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 489999999886 5 67877 4689999999999999999999999999999999999999998777666666
Q ss_pred ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHH
Q 014631 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSK 316 (421)
Q Consensus 239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~ 316 (421)
.++..+++++++||||.|+ +|+|+||++++ +++++.+..... ...+++.+.|.++.++|+... ..++++
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~ 344 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGD--------PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE 344 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-GGGCCEEEEEC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hcCCCCCEEEEccchhhcc-ccccEEEEEeC--------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 7766678999999999998 99999999996 357777765543 234678899999999997532 567888
Q ss_pred HHHHHHHHHHHHHHHhhc-CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CC
Q 014631 317 IVDILRDTADICYDRIKE-IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KN 390 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~ 390 (421)
.++.++++++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..+++..+++ +||.+.||..|+. .+
T Consensus 345 ~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~v~~~~~-----~~~~~l~~~l~~-~gV~v~pg~~f~~~~~~~~ 417 (448)
T 3aow_A 345 IRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIWVTLPDG-----IDSKKMLERAIK-KGVAYVPGEAFYAHRDVKN 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEECEEGGGGSTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCcEEEcchhhcCCCCCCC
Confidence 899999999999999987 57 687 44788899999999742 246677777655 5999999988843 57
Q ss_pred eEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 391 WLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 391 ~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++|++++ .+++++++++++|.+++++..+
T Consensus 418 ~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 418 TMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 8999998 4799999999999999987654
No 5
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=2.3e-49 Score=381.51 Aligned_cols=378 Identities=20% Similarity=0.378 Sum_probs=320.5
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-CCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-FDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~y~~~~g~~~l~~~i 95 (421)
+.++..+++.++.+..... +.++|+|+.|.|. +++++.+.+++.+.+.... ...|++..|..++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 76 (422)
T 3fvs_A 8 RRLDGIDYNPWVEFVKLAS-------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPLTKIL 76 (422)
T ss_dssp GGGTTCCCCHHHHHHHHHH-------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHHHHHH
T ss_pred HHhhccCccHHHHHHHHhh-------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHHHHHH
Confidence 4566666778888877654 5789999999966 5788999999999988753 45898888999999999
Q ss_pred HHHHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC----------
Q 014631 96 ADYLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP---------- 164 (421)
Q Consensus 96 a~~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~---------- 164 (421)
++++++.+|..+++ ++|++|+|++++++.++++++++||+|+++.|+|+++...++..|.+++.+++++
T Consensus 77 a~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G~~~~ 156 (422)
T 3fvs_A 77 ASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNGELGS 156 (422)
T ss_dssp HHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSSSCCB
T ss_pred HHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccccccc
Confidence 99999988888888 7999999999999999999999999999999999999999999999999999875
Q ss_pred CCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-C
Q 014631 165 EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-T 243 (421)
Q Consensus 165 ~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~ 243 (421)
++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++. .
T Consensus 157 ~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 236 (422)
T 3fvs_A 157 SSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASLPGMW 236 (422)
T ss_dssp GGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTTG
T ss_pred ccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhccccc
Confidence 235678999999999888999999999999999999999999999999999999999999999988876666666553 4
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc------cchhHHHH
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN------TKEDFFSK 316 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~ 316 (421)
++++++.|+||.|+++|+|+||++++ +++++.+..... ...+++++.+.++..+++. ....++++
T Consensus 237 ~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 308 (422)
T 3fvs_A 237 ERTLTIGSAGKTFSATGWKVGWVLGP--------DHIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSSYFVQ 308 (422)
T ss_dssp GGEEEEEEHHHHHTCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTCHHHH
T ss_pred CcEEEEecchhccCCccceEEEEEeC--------HHHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHHHHHH
Confidence 67899999999999999999999985 356677665543 3457788999999888863 13567888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC---------hHHHHHHHHhhcCeeEEeCCCCC
Q 014631 317 IVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD---------DMEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
.+++++++++.+.+.|+++ |+. +..|.+++|+|+.++..... ..+ ..+++..+++++||.+.||+.|+
T Consensus 309 ~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~ 385 (422)
T 3fvs_A 309 FPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPVSIFY 385 (422)
T ss_dssp HHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEGGGGS
T ss_pred HHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCcHHhc
Confidence 9999999999999999988 887 44789999999988642110 001 45778888888999999999885
Q ss_pred C-------CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 388 M-------KNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 388 ~-------~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
. .+++|+|++.+++++++++++|++++++
T Consensus 386 ~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 386 SVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp CHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred CCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 3 6899999999999999999999998864
No 6
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=8.2e-49 Score=373.41 Aligned_cols=379 Identities=20% Similarity=0.383 Sum_probs=315.4
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.+...+++.++.+....++.. ..++++++|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~ 78 (388)
T 1j32_A 6 RVESVSPSMTLIIDAKAKAMK--AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAIAQ 78 (388)
T ss_dssp HHHTSCCCSSTTTHHHHHHHH--TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHH
T ss_pred HhHhCCccHHHHHHHHHHHHH--hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence 344455555666555554432 237889999999865 456889999999988764 3579888899999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++++.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus 79 ~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 158 (388)
T 1j32_A 79 KLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQIRQ 158 (388)
T ss_dssp HHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHHHH
T ss_pred HHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHHHH
Confidence 99988887788899999999999999999999999999999999999999999999999999988655567899999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKR 255 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~ 255 (421)
.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..++. .++++++.|+||.
T Consensus 159 ~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~sK~ 238 (388)
T 1j32_A 159 AITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFAKT 238 (388)
T ss_dssp HCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEESTTT
T ss_pred hcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeechhc
Confidence 99888899999999999999999999999999999999999999999999887765545555442 3467999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|+|+||++++ +++.+.+..... .+.+++.+.+.++.++|+. ...++++.+++++++++++.+.|++
T Consensus 239 ~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~ 309 (388)
T 1j32_A 239 YAMTGWRVGFLAGP--------VPLVKAATKIQGHSTSNVCTFAQYGAIAAYEN-SQDCVQEMLAAFAERRRYMLDALNA 309 (388)
T ss_dssp TTCTTTCCEEEECC--------HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHS-CSHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-CcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 98899999999985 356666665543 2456788888888888874 3567888899999999999999999
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+|++. +..|.+++++|+.++... .+..++...+++++||.+.||..|+.++++|++++++++++++++++|.+++
T Consensus 310 ~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~~l 384 (388)
T 1j32_A 310 MPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEKFL 384 (388)
T ss_dssp CTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCCCc-ccCCCeeEEEEEecCCCC----CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHHHH
Confidence 88888 447788888888775311 1466777777666899999999887788999999999999999999999998
Q ss_pred HHh
Q 014631 415 QRH 417 (421)
Q Consensus 415 ~~~ 417 (421)
+++
T Consensus 385 ~~~ 387 (388)
T 1j32_A 385 HGI 387 (388)
T ss_dssp HHH
T ss_pred HHh
Confidence 765
No 7
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=4.7e-49 Score=375.47 Aligned_cols=373 Identities=21% Similarity=0.369 Sum_probs=303.1
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
+.++++.++.+....++.. ..++++|||+.|.+. ++.++.+.+++.+.+.... ..|++..|..++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~~ 81 (391)
T 3h14_A 9 SAVDPFIVMDVMEAARRAE--EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARLY 81 (391)
T ss_dssp TCCCCCTTHHHHHHHHHHH--HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHHH
T ss_pred hhcCcchHHHHHHHHHHHH--hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHHH
Confidence 3444566666665554322 247899999999866 5678899999999887643 58988889999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
++.+|.++++++|++|+|++++++.++++++++||+|++++|+|.++...++..|.+++.+++++++++.+|++++++.
T Consensus 82 ~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~- 160 (391)
T 3h14_A 82 GEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL- 160 (391)
T ss_dssp HHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS-
T ss_pred HHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc-
Confidence 9988888899999999999999999999999999999999999999999999999999999987766778999999877
Q ss_pred ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 180 DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 180 ~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
+++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++... +...+ .+++++++|+||.++++
T Consensus 161 --~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~~ 235 (391)
T 3h14_A 161 --DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSMT 235 (391)
T ss_dssp --CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCCT
T ss_pred --CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCCc
Confidence 68899999999999999999999999999999999999999999998877532 22222 45679999999999889
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
|+|+||+++++ ++.+.+..... ...+++.+.+.++.++++ ...++++.+++++++++.+.+.|+++ ++
T Consensus 236 G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~~ 304 (391)
T 3h14_A 236 GWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-GF 304 (391)
T ss_dssp TSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-TC
T ss_pred cceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 99999999863 35555555443 345788899999888887 46788999999999999999999987 44
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
..+..|.+++++|+.++... .+..+++..+++++||.+.||..|+. ++++|++++.+++++++++++|.++++
T Consensus 305 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~~ 380 (391)
T 3h14_A 305 TRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFMQ 380 (391)
T ss_dssp CCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHHH
T ss_pred CcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 32447888899999886421 25677888877777999999999876 579999999889999999999999998
Q ss_pred Hhhhc
Q 014631 416 RHAKQ 420 (421)
Q Consensus 416 ~~~~~ 420 (421)
+....
T Consensus 381 ~~~~~ 385 (391)
T 3h14_A 381 ARGEG 385 (391)
T ss_dssp HC---
T ss_pred Hhccc
Confidence 87654
No 8
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-48 Score=373.47 Aligned_cols=378 Identities=19% Similarity=0.365 Sum_probs=308.7
Q ss_pred hHHhhh--hhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CCCCCCCCCCHHH
Q 014631 17 EHITAT--ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FDCYSPSVGILPA 91 (421)
Q Consensus 17 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~y~~~~g~~~l 91 (421)
+.++.+ .++.+++++...++...+..+.++|||+.|.|. +++++.+.+++.+.+.... ...|++..|..++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~l 81 (398)
T 3ele_A 6 ESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVET 81 (398)
T ss_dssp HHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHHH
T ss_pred HHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHHH
Confidence 344554 367788877665544333346789999999765 5678999999999987632 4579888999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170 (421)
Q Consensus 92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 170 (421)
|+++++++++.+|.++++++|++|+|+++++..++++++++| |+|++++|+|+++...++..|.+++.+++++ +++++
T Consensus 82 r~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~~ 160 (398)
T 3ele_A 82 RAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQI 160 (398)
T ss_dssp HHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSSC
T ss_pred HHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCcC
Confidence 999999999988888899999999999999999999999999 9999999999999999999999999999864 36789
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh------cCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK------LGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
|++++++.++++++++++++|+||||.++|.+++++|+++|++ ||+++|+||+|+++.++|....... ...+
T Consensus 161 d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~~ 238 (398)
T 3ele_A 161 DFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYYD 238 (398)
T ss_dssp CHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GTCS
T ss_pred CHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hhcC
Confidence 9999999998889999999999999999999999999999999 9999999999999988775433322 2345
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (421)
++++++|+||.|+++|+|+||+++++.. .....+...+..... .+.+++.+.+.++..+++... .+++++
T Consensus 239 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~~ 310 (398)
T 3ele_A 239 NTLVCYSYSKSLSLPGERIGYVLVPDEV--YDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAYK 310 (398)
T ss_dssp SEEEEEESTTTSSCTTTCCEEEECCTTS--TTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHHH
T ss_pred CeEEEEehhhcCCCccceeEEEEEcchh--hhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHHH
Confidence 7899999999998899999999997532 111224444433322 234677788888877776422 356778
Q ss_pred HHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHH
Q 014631 323 DTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSA 402 (421)
Q Consensus 323 ~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~ 402 (421)
++++++.+.|+++ ++. +..|.+++++|+.++.. +..++... +.++||.+.||..|+.++++|++++.++++
T Consensus 311 ~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~-l~~~gi~v~~g~~~~~~~~iRis~~~~~e~ 381 (398)
T 3ele_A 311 ENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAFCEK-AKEEDVLIVAADGFGCPGWVRISYCVDREM 381 (398)
T ss_dssp HHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHHHHH-HHTTTEECEESGGGTCTTEEEEECCSCHHH
T ss_pred HHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHHHHH-HHHCCEEEeCccccCCCCeEEEEecCCHHH
Confidence 8888899999877 777 44788899999988642 45666665 577899999999998889999999999999
Q ss_pred HHHHHHHHHHHHHHhh
Q 014631 403 LEEGLGRIKAFCQRHA 418 (421)
Q Consensus 403 l~~~~~~l~~~~~~~~ 418 (421)
+++++++|.+++++++
T Consensus 382 i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 382 IKHSMPAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998875
No 9
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.9e-48 Score=372.55 Aligned_cols=381 Identities=20% Similarity=0.333 Sum_probs=303.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..++++.++.+....++. . ..+.++|||+.|.+. ++.++.+.+++.+.+.......|++..|..++|++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~-~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 87 (412)
T 2x5d_A 14 IDRLPPYVFNITAELKMAA-R-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHW 87 (412)
T ss_dssp -------CHHHHHHHHHHH-H-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHH
T ss_pred HhhcCchHHHHHHHHHHHH-h-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHH
Confidence 4455556666655444322 1 247889999999865 457899999999888664345788888999999999999
Q ss_pred HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
+.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus 88 ~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~ 167 (412)
T 2x5d_A 88 YRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIR 167 (412)
T ss_dssp HHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHH
T ss_pred HHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHH
Confidence 98877877777 79999999999999999999999999999999999999999999999999998755466689999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+.|....++..++. .+++++++|+||.|
T Consensus 168 ~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~ 247 (412)
T 2x5d_A 168 ESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSY 247 (412)
T ss_dssp TEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CC
T ss_pred hcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCcccc
Confidence 98888899999999999999999999999999999999999999999999887655445555543 45789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++++.+..... .+.+++++.+.++.++|+.. +.++++.+++++++++.+.+.|+++
T Consensus 248 ~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 318 (412)
T 2x5d_A 248 NMAGWRIGFMVGN--------PELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREA 318 (412)
T ss_dssp SCTTSCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEcC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 8899999999985 356777765543 24578889999999888753 4678889999999999999999987
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
++. +..|.+|+|+|+.++.... ..+..+++..+++++||.+.||..|+. ++++|++++.+++++++++++|.++
T Consensus 319 -g~~-~~~~~~g~~~~~~~~~~~~--~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 394 (412)
T 2x5d_A 319 -GWM-VENPKASMYVWAKIPEPYA--HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAM 394 (412)
T ss_dssp -TCC-CCCCSBSSEEEEECCTTTG--GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHH
T ss_pred -CCE-ecCCCeeeEEEEEcCCccC--CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 777 4477788899998863210 003567777776778999999988863 5799999998999999999999999
Q ss_pred HHHhh
Q 014631 414 CQRHA 418 (421)
Q Consensus 414 ~~~~~ 418 (421)
++++.
T Consensus 395 l~~~~ 399 (412)
T 2x5d_A 395 FRADG 399 (412)
T ss_dssp HHHTT
T ss_pred HHhcC
Confidence 98754
No 10
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=6.6e-48 Score=367.30 Aligned_cols=377 Identities=24% Similarity=0.456 Sum_probs=315.3
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..+..++++.++.+....++ ..++|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la 73 (389)
T 1gd9_A 5 DRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKG-LTHYGPNIGLLELREAIA 73 (389)
T ss_dssp HHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred hHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCC-CCCCCCCCCcHHHHHHHH
Confidence 34566677888888877663 2579999999865 457899999999998764 347888889999999999
Q ss_pred HHHhhhCCCCCCCCc-EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+++.+.+|..+++++ |++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++
T Consensus 74 ~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 153 (389)
T 1gd9_A 74 EKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDEL 153 (389)
T ss_dssp HHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHHH
T ss_pred HHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHHH
Confidence 999887787778889 9999999999999999999999999999999999999999999999999986545677899999
Q ss_pred HhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccc
Q 014631 176 EALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSK 254 (421)
Q Consensus 176 ~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK 254 (421)
++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++. .++++++.|+||
T Consensus 154 ~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 233 (389)
T 1gd9_A 154 KKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFSK 233 (389)
T ss_dssp HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEESTT
T ss_pred HHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecChh
Confidence 9999888899999999999999999999999999999999999999999998887653444555443 456899999999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l 332 (421)
.|+++|+|+||++++ +++++.+..... ...+++++.+.++.++|+... +.++++.+++++++++.+.+.|
T Consensus 234 ~~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L 305 (389)
T 1gd9_A 234 TFAMTGWRLGFVAAP--------SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKRL 305 (389)
T ss_dssp TTTCGGGCCEEEECC--------HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccceEEEEEC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 998899999999985 357777766543 345778899999988887522 2278888999999999999999
Q ss_pred hcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHH
Q 014631 333 KEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l 410 (421)
+++ |+. +..|.+++++|+.++... .+..++...+++++||.+.||..|+. ++++|++++.+++++++++++|
T Consensus 306 ~~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l 379 (389)
T 1gd9_A 306 NEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDRM 379 (389)
T ss_dssp HHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHH
T ss_pred HHc-CCe-ecCCCeeeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 988 887 446788889998886311 14667777776588999999988864 6799999999999999999999
Q ss_pred HHHHHHhh
Q 014631 411 KAFCQRHA 418 (421)
Q Consensus 411 ~~~~~~~~ 418 (421)
.+++++..
T Consensus 380 ~~~~~~~~ 387 (389)
T 1gd9_A 380 ERVLKERK 387 (389)
T ss_dssp HHHHHHTT
T ss_pred HHHHHhcc
Confidence 99987643
No 11
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-48 Score=378.18 Aligned_cols=376 Identities=23% Similarity=0.383 Sum_probs=307.3
Q ss_pred hhhhhHHHHHHHHHHhc--cccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 22 TATLTVRSALTIIKQNL--KENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 22 ~~~~~~~~~~~~~~~~~--~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
++++.++.+....++.. -+..+.++|||+.|.|. +++++.+.+++.+++.......|++..|.+++|+++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 108 (447)
T 3b46_A 33 TAKDVWSLTNEAAAKAANNSKNQGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLY 108 (447)
T ss_dssp CCCCHHHHHHHHHHHHCCC---TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHhhccchhccCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHH
Confidence 44556666665543210 01136789999999875 4678999999999987633458988889999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC----------Ccc
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK----------GWE 169 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~----------~~~ 169 (421)
.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++ +|.
T Consensus 109 ~~~~g~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~ 188 (447)
T 3b46_A 109 SPIYNTELKAENVTVTTGANEGILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWT 188 (447)
T ss_dssp TTTTTSCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSE
T ss_pred HHhcCCCCChhhEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcc
Confidence 9888888888999999999999999999999999999999999999999999999999999886543 578
Q ss_pred CCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc--CCCCCEE
Q 014631 170 VDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF--GSTVPVI 247 (421)
Q Consensus 170 ~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i 247 (421)
+|++++++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++| ...++..+ +..++++
T Consensus 189 ~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i 267 (447)
T 3b46_A 189 IDFEQFEKAITSKTKAVIINTPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTL 267 (447)
T ss_dssp ECHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEE
T ss_pred cCHHHHHHhhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEE
Confidence 99999999998889999999999999999999999999999999999999999999998876 33344444 1235789
Q ss_pred EEcccccccCCCCceEEEEEe-eCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVT-SDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDT 324 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 324 (421)
++.|+||.|+++|+|+||+++ + +++++.+..... ...+++++.|.++.++|+... +.++++.+++++++
T Consensus 268 ~i~S~sK~~~~~G~riG~~~~~~--------~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~ 339 (447)
T 3b46_A 268 TVGSAGKSFAATGWRIGWVLSLN--------AELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINK 339 (447)
T ss_dssp EEEEHHHHTTCTTSCCEEEECSC--------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred EEecCchhcCCcchhhEEEEeCC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHH
Confidence 999999999889999999998 5 356776665432 345678889999888887532 56788899999999
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC----------CCChHHHHHHHHhhcCeeEEeCCCCCC------
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG----------ISDDMEFALQLAKEESVIVLPGMAVGM------ 388 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gv~v~~g~~~~~------ 388 (421)
++.+.+.|+++ |+. +..|.+|+|+|++++....+. ..++.+++.++++++||.+.||..|+.
T Consensus 340 ~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~ 417 (447)
T 3b46_A 340 FKIFTSIFDEL-GLP-YTAPEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKA 417 (447)
T ss_dssp HHHHHHHHHHH-TCC-EECCSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGG
T ss_pred HHHHHHHHHHC-CCe-ecCCCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCC
Confidence 99999999987 777 447888999999986421110 113557777787788999999988753
Q ss_pred -CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 389 -KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 389 -~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.+++|+|++.+++++++++++|.+
T Consensus 418 ~~~~iRls~~~~~e~l~~~~~~l~~ 442 (447)
T 3b46_A 418 AENLLRFAVCKDDAYLENAVERLKL 442 (447)
T ss_dssp GTTEEEEECCSCHHHHHHHHHHGGG
T ss_pred CCCEEEEEEeCCHHHHHHHHHHHHH
Confidence 578999999999999999999887
No 12
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=5.5e-48 Score=368.71 Aligned_cols=370 Identities=19% Similarity=0.344 Sum_probs=309.2
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++..++.+++.+....+. +....++++|+|+.|.+. ++.++.+.+++.+.+.. ...|++..|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~ 77 (396)
T 3jtx_A 5 LLKQLKPYPFARLHEAMQG-ISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLHE--LEKYPLTAGLPELRQACAN 77 (396)
T ss_dssp HHHHCCSCHHHHHHHHTTT-CCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGGG--GGSCCCTTCCHHHHHHHHH
T ss_pred hhccCCCChHHHHHHHHHh-hhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhhh--ccCCCCCCCcHHHHHHHHH
Confidence 4555666777777654443 333458999999999965 56789999999998763 4589888899999999999
Q ss_pred HHhhhCCCC-CCCC-cEEEcCCHHHHHHHHHHHhcCCC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631 98 YLNSELPCK-LSPD-DVYLTAGCKQAIQVILTVLARPG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170 (421)
Q Consensus 98 ~l~~~~~~~-~~~~-~i~~~~g~~~al~~~~~~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 170 (421)
++.+.+|.. ++++ +|++|+|+++++..++++++++| |+|+++.|+|+++...++..|.+++.+++ +++++.+
T Consensus 78 ~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~ 156 (396)
T 3jtx_A 78 WLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNP 156 (396)
T ss_dssp HHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCC
T ss_pred HHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCcc
Confidence 999988876 7788 99999999999999999999997 79999999999999999999999999998 4567778
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc----cC-CCCC
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV----FG-STVP 245 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~ 245 (421)
|++++++.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++........ ++ ..++
T Consensus 157 d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
T 3jtx_A 157 DWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236 (396)
T ss_dssp CGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTT
T ss_pred CHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCc
Confidence 999999988888999999999999999999999999999999999999999999999887732222211 11 2467
Q ss_pred EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
++++.||||.|+++|+|+||++++ +++++.+..... ...+++++.+.++.++++. ..++.+.+++++++
T Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~ 306 (396)
T 3jtx_A 237 LLMFTSLSKRSNVPGLRSGFVAGD--------AELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEK 306 (396)
T ss_dssp EEEEEESTTTSSCGGGCCEEEEEC--------HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHH
T ss_pred EEEEeccccccCCcccceEEEEeC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHH
Confidence 899999999999999999999885 457777766543 3457889999999998875 57788999999999
Q ss_pred HHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--------CCeEEEEe
Q 014631 325 ADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--------KNWLRITF 396 (421)
Q Consensus 325 ~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~iRi~~ 396 (421)
++.+.+.|+++ +. +..|.+++|+|+.++.. +..+++..+++++||.+.||..|+. .+++|+++
T Consensus 307 ~~~l~~~l~~~--~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~ 377 (396)
T 3jtx_A 307 FERVIPILQQV--FD-VKLPDASFYIWLKVPDG------DDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIAL 377 (396)
T ss_dssp HHHHHHHHTTT--SC-CCCCSSSSEEEEECTTS------CHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEEC
T ss_pred HHHHHHHHHhc--CC-ccCCCeeEEEEEECCCC------CHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEE
Confidence 99999999876 33 33688899999998741 4677888887888999999998864 47999999
Q ss_pred cCCHHHHHHHHHHHHHHH
Q 014631 397 AIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 397 ~~~~e~l~~~~~~l~~~~ 414 (421)
+.+++++++++++|.+++
T Consensus 378 ~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 378 VADVATCVKAAEDIVSLY 395 (396)
T ss_dssp CSCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 13
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=8.7e-48 Score=366.33 Aligned_cols=369 Identities=25% Similarity=0.412 Sum_probs=309.0
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++.++++.++++....++... .++++|+|+.|.+. ++.++.+.+++.+.+.... ..|++..|..++|+++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~--~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~la~ 89 (389)
T 1o4s_A 17 RISEIPISKTMELDAKAKALIK--KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREGIAK 89 (389)
T ss_dssp HHHHSCCCSSHHHHHHHHHHHH--TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHHHHH
T ss_pred HHhhcCccHHHHHHHHHHHHHh--cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHH
Confidence 3556667777777776654331 37889999999865 4567999999999987643 478887889999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++++.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|++++++
T Consensus 90 ~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~ 169 (389)
T 1o4s_A 90 RIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEEVEG 169 (389)
T ss_dssp HHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHHHHH
T ss_pred HHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHHHHH
Confidence 99887787778899999999999999999999999999999999999999999999999999998654567899999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 256 (421)
.++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|. ..++..++. .++++++.|+||+|
T Consensus 170 ~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~ 248 (389)
T 1o4s_A 170 LLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE-FTSILDVSEGFDRIVYINGFSKSH 248 (389)
T ss_dssp TCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC-CCCHHHHCSSSTTEEEEEESTTTT
T ss_pred hcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCCHhhcCCCCCcEEEEeechhhc
Confidence 9988889999999999999999999999999999999999999999999887652 234444432 45689999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++.+.+..... .+.+++++.+.++.++|+.. +++.+++++++++++.+.|+++
T Consensus 249 ~~~G~r~G~l~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L~~~ 316 (389)
T 1o4s_A 249 SMTGWRVGYLISS--------EKVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERLKKM 316 (389)
T ss_dssp TCGGGCCEEEECC--------HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCcccceEEEEeC--------HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHHHhc
Confidence 8899999999985 356676666543 23567888898888888752 6777888999999999999988
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
++. +..|.+++++|+.++ . +..++...+++++||.+.||..|+.++++|++++.+++++++++++|.++++
T Consensus 317 -g~~-~~~~~~~~~~~~~~~-~------~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 387 (389)
T 1o4s_A 317 -GVK-FVEPEGAFYLFFKVR-G------DDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIEDFLN 387 (389)
T ss_dssp -TCC-CCCCSBSSEEEEECS-S------CHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHHHHT
T ss_pred -CCe-eecCCcceEEEEeCC-C------CHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 887 446788889998886 1 4667777776578999999988877789999999999999999999998874
No 14
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=4.8e-48 Score=370.47 Aligned_cols=357 Identities=21% Similarity=0.314 Sum_probs=305.6
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQAIQ 123 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~al~ 123 (421)
.+|||+.|++. .++.++.+++++.+.+.......|++..|..++++++++++.+.+|.++++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999866 257889999999999876433468888899999999999999988877766 79999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC----CCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP----EKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~----~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~ 199 (421)
.++.+++++||+|+++.|+|.++...++..|.+++.++++. ++++.+|++++++.+.++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999999743 35678999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC--CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG--STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
|.+++++|+++|++||+++|+||+|+.+.++|....++..++ ..++++++.||||.|+++|+|+||++++
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 268 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGS-------- 268 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEEC--------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcC--------
Confidence 999999999999999999999999999998887666666653 3567899999999999999999999985
Q ss_pred HHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 278 LRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 278 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++++.+..... ...+++++.+.++..+++. ...++++.+++++++++.+.+.|+++|++. +..|.+++++|+.++.
T Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 269 RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDE-APGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK 346 (407)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCC-CTTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred HHHHHHHHHHHhhhccCCChHHHHHHHHHHhc-cchHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence 357777766543 3446678888888888863 346788888999999999999999988888 5478888999988875
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.. .+..++...|++++||.+.||..|+. .+++|++++.+++++++++++|.+++++++
T Consensus 347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 21 24667777776778999999998874 689999999999999999999999998765
No 15
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.5e-48 Score=372.78 Aligned_cols=372 Identities=21% Similarity=0.348 Sum_probs=311.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
++.++++.++.+.+. ..+.++|+|+.|.|. +++++.+.+++.+.+.......|++..|..++|++++++
T Consensus 5 ~~~~~~~~~~~~~~~-------~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~~ 73 (410)
T 3e2y_A 5 IEGLDSNVWVEFTKL-------AADPSVVNLGQGFPD----ISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSCL 73 (410)
T ss_dssp GTTCCCCHHHHTTTT-------TTSTTSEECSSCCCC----SCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHHH
T ss_pred hccCCccHHHHHHHH-------hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHHH
Confidence 444455666665542 236789999999966 678899999999998765556898888999999999999
Q ss_pred HhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC---------CCCc
Q 014631 99 LNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP---------EKGW 168 (421)
Q Consensus 99 l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~---------~~~~ 168 (421)
+++.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|.++...+...|.+++.+++++ +.++
T Consensus 74 ~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~ 153 (410)
T 3e2y_A 74 YGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSDW 153 (410)
T ss_dssp HHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGGE
T ss_pred HHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccCC
Confidence 99888888888 8999999999999999999999999999999999999999999999999998763 2456
Q ss_pred cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEE
Q 014631 169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVI 247 (421)
Q Consensus 169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i 247 (421)
.+|++++++.++++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.++|....++..+.. .++++
T Consensus 154 ~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 233 (410)
T 3e2y_A 154 TFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTI 233 (410)
T ss_dssp ECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEE
T ss_pred cCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEE
Confidence 78999999999888999999999999999999999999999999999999999999999988776656655543 46789
Q ss_pred EEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc------cchhHHHHHHHH
Q 014631 248 TLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN------TKEDFFSKIVDI 320 (421)
Q Consensus 248 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~ 320 (421)
++.|+||.|+++|+|+||++++ +++++.+..... ...+++++.+.++..+++. ....++++.+++
T Consensus 234 ~~~S~sK~~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 3e2y_A 234 TIGSAGKTFSVTGWKLGWSIGP--------AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKE 305 (410)
T ss_dssp EEEEHHHHSSCGGGCCEEEECC--------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHH
T ss_pred EEecchhhcCCCCceEEEEEEC--------HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHH
Confidence 9999999999999999999985 356777765543 3457788999999888863 235678899999
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC-------CChHHHHHHHHhhcCeeEEeCCCCCC-----
Q 014631 321 LRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI-------SDDMEFALQLAKEESVIVLPGMAVGM----- 388 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~~g~~~~~----- 388 (421)
++++++.+.+.|+++ |+. +..|.+++|+|+.+..... +. .++.+++..+++++||.+.||+.|+.
T Consensus 306 ~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~ 382 (410)
T 3e2y_A 306 LEVKRDRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSKP 382 (410)
T ss_dssp HHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTHH
T ss_pred HHHHHHHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCCC
Confidence 999999999999988 887 4478899999998864211 00 01347777788889999999998853
Q ss_pred --CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 389 --KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 389 --~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
.+++|+|++.+++++++++++|++
T Consensus 383 ~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 383 HFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp HHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 489999999999999999999875
No 16
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-48 Score=369.82 Aligned_cols=369 Identities=13% Similarity=0.111 Sum_probs=290.3
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHH-hcCCCCCCCCCCCCHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAV-RSAEFDCYSPSVGILPARRA 94 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~y~~~~g~~~l~~~ 94 (421)
++++..++++++++...+++.. .+++|||+.|.| +..+.+++++.+++++. .+ +....+.|.+..|+++||++
T Consensus 6 ~~~~~~~~~~i~~~~~~~~~~~----~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr~a 80 (405)
T 3k7y_A 6 SSLENIEVDNILKTAREFKEDT----CEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFSTL 80 (405)
T ss_dssp GGCCCCCCCHHHHHHHHHTTSS----CSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhcCC----CcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHHHH
Confidence 4677888999999998887543 578999999974 32334567899999887 44 44445689999999999999
Q ss_pred HHHHHhhhCCCCCCCCc--EEEcCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631 95 IADYLNSELPCKLSPDD--VYLTAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170 (421)
Q Consensus 95 ia~~l~~~~~~~~~~~~--i~~~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 170 (421)
+++|+....+...++++ +++|+|+++|+.+++.++.+ | |+|++++|+|.+|...++..|++++.+++..++++++
T Consensus 81 ia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~ 159 (405)
T 3k7y_A 81 TQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLIDI 159 (405)
T ss_dssp HHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTTEE
T ss_pred HHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccCCc
Confidence 99999776665556665 59999999999999999887 8 9999999999999999999999999999854556899
Q ss_pred CHHHHHhhhcc--CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC--ccccccc-CCCC
Q 014631 171 DLDGLEALADE--NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP--YVRMGVF-GSTV 244 (421)
Q Consensus 171 d~e~l~~~~~~--~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~~~ 244 (421)
|++++++.+.+ .++++++++| |||||.+++.+++++|+++|++||+++|+||+|.++.+++.. ..++..+ +..+
T Consensus 160 d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~~~ 239 (405)
T 3k7y_A 160 NYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEKNI 239 (405)
T ss_dssp CHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTTTC
T ss_pred CHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhcCC
Confidence 99999998863 4567777655 899999999999999999999999999999999999876421 1222222 2346
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH----Hhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS----IKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF 314 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~ 314 (421)
++++++||||.|+++|+|+||+++..+. +++++. +.... ..+++++.+.|.++..+++... ...+
T Consensus 240 ~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~~l 314 (405)
T 3k7y_A 240 AFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIKEL 314 (405)
T ss_dssp CEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred cEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8999999999999999999998753221 233333 33322 2345677888998888887521 2345
Q ss_pred HHHHHHHHHHHHHHHHHhh----cCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631 315 SKIVDILRDTADICYDRIK----EIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~----~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
.+.+++++++++.+.+.|+ ++. ++. +..|++|+|+|+.++. +++.+| +++||.+.||.
T Consensus 315 ~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~--- 379 (405)
T 3k7y_A 315 SQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG--- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS---
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC---
Confidence 5667779999999999999 762 256 4479999999987752 345566 88999999963
Q ss_pred CCCeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631 388 MKNWLRITFA-IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 388 ~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~ 416 (421)
|||++ .+++++++++++|+++++.
T Consensus 380 -----Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 -----RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -----EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -----eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 99998 7899999999999998864
No 17
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=6.2e-48 Score=369.52 Aligned_cols=386 Identities=26% Similarity=0.463 Sum_probs=308.5
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..+.+++.+.++.+. ..++.. ..++++|+|+.|.|... .++.++.+.+++.+.+... ...|++..|..++|++++
T Consensus 14 ~~~~~~~~~~~~~~~-~~~~~~--~~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la 88 (406)
T 1xi9_A 14 KRALSVEYAIRDVVL-PARELE--KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEG-HNYYGDSEGLPELRKAIV 88 (406)
T ss_dssp HHHHTCCC--------CHHHHH--HTTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHH
T ss_pred HHHhcCChhHHHHHH-HHHHHH--HcCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence 556666666666655 333221 23788999999987311 2467799999999988764 347888888999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
++++..+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++.++++++.+|+++++
T Consensus 89 ~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 168 (406)
T 1xi9_A 89 EREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDIDDIR 168 (406)
T ss_dssp HHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHHHHH
T ss_pred HHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHHHHH
Confidence 99998888888899999999999999999999999999999999999999999999999999999865456778999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKR 255 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~ 255 (421)
+.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++ ...++..++ .++ +++++|+||.
T Consensus 169 ~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~sK~ 246 (406)
T 1xi9_A 169 KKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGLSKV 246 (406)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEESTTT
T ss_pred HhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEeccccc
Confidence 9998888999999999999999999999999999999999999999999988743 233444554 456 7999999999
Q ss_pred cCCCCceEEEEE--eeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhh
Q 014631 256 WIVPGWRLGWLV--TSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIK 333 (421)
Q Consensus 256 ~~~~G~r~G~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~ 333 (421)
++++|+|+||++ ++++. ..++++.+........+++++.+.++.++|+.. ..++++.+++++++++.+.+.|+
T Consensus 247 ~~~~G~r~G~~~~~~~~~~----~~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~ 321 (406)
T 1xi9_A 247 YFATGWRLGYMYFVDPENK----LSEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYKRLN 321 (406)
T ss_dssp TCCGGGCCEEEEEECTTCT----THHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCccEEEEEEEecCchh----HHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHH
Confidence 988999999999 64210 014566665543322567888999999999643 45588888999999999999999
Q ss_pred cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHH
Q 014631 334 EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIK 411 (421)
Q Consensus 334 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~ 411 (421)
++|++. +..|.+++++|+.++... ..+..++...+++++||.+.||..|+. ++++|++++++++++++++++|.
T Consensus 322 ~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~~l~ 397 (406)
T 1xi9_A 322 EIPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMDRFE 397 (406)
T ss_dssp TSTTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHHHH
T ss_pred hCCCCe-eecCCeeEEEEEecCccC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 988888 447788889988776310 014667777776688999999988865 68999999999999999999999
Q ss_pred HHHHHhh
Q 014631 412 AFCQRHA 418 (421)
Q Consensus 412 ~~~~~~~ 418 (421)
++++++.
T Consensus 398 ~~l~~~~ 404 (406)
T 1xi9_A 398 KFMKERL 404 (406)
T ss_dssp HHHHHC-
T ss_pred HHHHHHh
Confidence 9998764
No 18
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=1.2e-47 Score=376.00 Aligned_cols=370 Identities=21% Similarity=0.335 Sum_probs=300.3
Q ss_pred CeeeccCCCCCCCCCCC-------------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFR-------------------------TTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~-------------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia 96 (421)
++|+.++|+|......| .|..+.+++.+.+... ....|++..|..++|++++
T Consensus 65 ~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia 144 (500)
T 3tcm_A 65 EILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMIPGRATGAYSHSQGIHGLRDAIA 144 (500)
T ss_dssp SCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTSTTSCSSSCCCTTCCHHHHHHHH
T ss_pred HhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcCCCCcCCCcCCCcChHHHHHHHH
Confidence 89999999985332211 4555666667777652 4568999999999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+++++++|.++++++|++|+|+++++..++.+++ ++||.|+++.|+|.++...+...|++++.++++.+++|.+|++++
T Consensus 145 ~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 224 (500)
T 3tcm_A 145 SGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALHGGALVPYYLNESTGWGLETSDV 224 (500)
T ss_dssp HHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHTTCEEEEEECBTTTTSBCCHHHH
T ss_pred HHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHcCCEEEEEecccccCCCCCHHHH
Confidence 9999888888999999999999999999999998 899999999999999999999999999999998877889999999
Q ss_pred Hhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccc----cc---C
Q 014631 176 EALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMG----VF---G 241 (421)
Q Consensus 176 ~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~----~~---~ 241 (421)
++.+++ ++++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. ...++. .+ .
T Consensus 225 ~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~~~~~~~~s~~~~~~~~~~~~ 304 (500)
T 3tcm_A 225 KKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQENIYVDNKKFHSFKKIVRSLGYGE 304 (500)
T ss_dssp HHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTTCSS
T ss_pred HHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccccccCCCCCCCcHHHHHHHhcccc
Confidence 998876 688999999999999999999999999999999999999999999988643 333432 22 2
Q ss_pred CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc---------ch
Q 014631 242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT---------KE 311 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~~ 311 (421)
...++++++||||.| |++|+|+||+++.... +++++.+........+++.+.|.++..+++.. ..
T Consensus 305 ~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 379 (500)
T 3tcm_A 305 EDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITGQILASLVMNPPKASDESYASYK 379 (500)
T ss_dssp SCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHHHHHHHHHHSCCCSSSTHHHHHH
T ss_pred CCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccccchhHHHHH
Confidence 334578999999998 8899999999984211 23566666655555678899999998888631 12
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc-------ccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-------LEGISDDMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~ 384 (421)
.+.++++++++++++.+.+.|+++||+. +..|++++|.|+.+..+. ..+...+..++.++++++||.+.||+
T Consensus 380 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~g~~~~~~~~~lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~ 458 (500)
T 3tcm_A 380 AEKDGILASLARRAKALEHAFNKLEGIT-CNEAEGAMYVFPQICLPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGS 458 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBTTEECCEECCCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEEST
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcE-EecCCeEEEEeeeecCchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCc
Confidence 4556777889999999999999999998 458899999996654211 00111234445678888999999999
Q ss_pred CCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 385 AVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 385 ~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.|+. ..++|++++.+++++++++++|.++++++.++
T Consensus 459 ~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 459 GFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp TTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9974 35799999988999999999999999887653
No 19
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=2e-48 Score=372.46 Aligned_cols=374 Identities=20% Similarity=0.320 Sum_probs=304.3
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.+..++++.++.+....+. ..+.++|||+.|.+. ++.++.+.+++.+.+.......|++..|..++|+++++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~----~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~ 96 (404)
T 2o1b_A 25 KLANIPDSYFGKTMGRKIE----HGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAIVD 96 (404)
T ss_dssp HHHTSCCCTTC-------C----CCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHHHH
T ss_pred HhhhCCchHHHHHHHHHHh----cCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Confidence 4455555555555443332 236779999999875 45678999999998865323478877889999999999
Q ss_pred HHhhhCCCCCCC-CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 98 YLNSELPCKLSP-DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 98 ~l~~~~~~~~~~-~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
++.+.+|.++++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++.++ +++.+|+++++
T Consensus 97 ~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~ 175 (404)
T 2o1b_A 97 FYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSKVD 175 (404)
T ss_dssp HHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGGSC
T ss_pred HHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHHHH
Confidence 998877877776 7999999999999999999999999999999999999999999999999998865 56678999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKR 255 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~ 255 (421)
+.+.++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.++|. ..++..+. ..+++++++|+||.
T Consensus 176 ~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~ 254 (404)
T 2o1b_A 176 SQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLSKG 254 (404)
T ss_dssp HHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEESTTT
T ss_pred HhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecchh
Confidence 88877789999999999999999999999999999999999999999999887663 33333433 23567999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|+|+||++++ +++++.+..... ...+++.+.+.++.++|+.. +.++++.+++++++++.+.+.|++
T Consensus 255 ~g~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 325 (404)
T 2o1b_A 255 YNMSGFRVGFAVGN--------KDMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAMLAK 325 (404)
T ss_dssp TTCGGGCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCchhheEeEecC--------HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 98899999999985 356777766543 24578889999998888753 677889999999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
+ ++. +..|.+++|+|+.++.. .+..+++..+++++||.+.||..|+. .+++|++++.+++++++++++|.+
T Consensus 326 ~-g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l~~ 398 (404)
T 2o1b_A 326 A-DLP-FVHAKGGIYVWLETPPG-----YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRLTE 398 (404)
T ss_dssp T-TCC-EECCCBSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHHHG
T ss_pred c-CCe-ecCCCcceEEEEeCCCC-----CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 7 777 44677888999998632 14567788777778999999988864 679999999888999999999998
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
+++++
T Consensus 399 ~l~~~ 403 (404)
T 2o1b_A 399 LAYLY 403 (404)
T ss_dssp GGGGG
T ss_pred HHHhh
Confidence 87654
No 20
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-47 Score=363.79 Aligned_cols=356 Identities=18% Similarity=0.259 Sum_probs=306.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|||+.|++. +++++.+.+++.+.+.+. ...|++. ..++++++++++++.+|.++++++|++|+|+++++
T Consensus 26 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~ 98 (391)
T 3dzz_A 26 KEKELPMWIAEMD----FKIAPEIMASMEEKLKVA-AFGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAI 98 (391)
T ss_dssp CTTCEECCSSCCS----SCCCHHHHHHHHHHHTTC-CCCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCCC----CCCCHHHHHHHHHHHhcC-cCCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHH
Confidence 6789999999755 678999999999998764 3467655 68999999999999888888899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~ 200 (421)
+.++.++.++||+|+++.|+|+++...++..|.+++.++++ .++.+.+|++++++.++ ++++++++++|+||||.++|
T Consensus 99 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~ 178 (391)
T 3dzz_A 99 SAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWS 178 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccC
Confidence 99999999999999999999999999999999999999885 34456789999999997 68899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++||+++|+||+|+++.+.|....++..++. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 251 (391)
T 3dzz_A 179 EEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPN-------P 251 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECC-------H
Confidence 999999999999999999999999999888766666666553 4578999999999989999999999863 3
Q ss_pred HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecC
Q 014631 279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLN 355 (421)
Q Consensus 279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~ 355 (421)
++.+.+..... ...+++++.+.++..+++. ...++++.+++++++++++.+.|++ +|++. +..|.++++.|+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 329 (391)
T 3dzz_A 252 DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDIS 329 (391)
T ss_dssp HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEECG
T ss_pred HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEehh
Confidence 56676665532 2347888899988888875 4577889999999999999999998 88998 557888999999887
Q ss_pred cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631 356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~ 418 (421)
... .+..++...+++++||.+.||..|+. ++++|++++++++++++++++|.+++++++
T Consensus 330 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 330 ALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp GGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred hcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 531 14677777776688999999998876 489999999999999999999999998764
No 21
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=5e-48 Score=366.56 Aligned_cols=351 Identities=19% Similarity=0.294 Sum_probs=302.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|+++|||+.|.+. ++.++.+.+++.+.+... ...|++ .+ .++|+++++++++.+|..+++++|++|+|++++
T Consensus 21 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a 93 (377)
T 3fdb_A 21 YGQGVLPLWVAESD----FSTCPAVLQAITDAVQRE-AFGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVRG 93 (377)
T ss_dssp SCTTSEECCSSCCC----SCCCHHHHHHHHHHHHTT-CCSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred cCCCeeeecccCCC----CCCCHHHHHHHHHHHHcC-CCCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHH
Confidence 38899999999755 578899999999998864 357888 77 999999999999888888889999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
++.++++++++||+|+++.|+|+++...++..|.+++.++.+++ +|++++++.++++++++++++|+||||.++|.
T Consensus 94 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~ 169 (377)
T 3fdb_A 94 LYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFAP 169 (377)
T ss_dssp HHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCCH
T ss_pred HHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999987653 89999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
+++++|+++|++||+++|+||+|+.+.++| ....++..++..++++++.|+||.++++|+|+||+++.+ +++
T Consensus 170 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~~~ 242 (377)
T 3fdb_A 170 EWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSN-------PSD 242 (377)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCS-------HHH
T ss_pred HHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCC-------HHH
Confidence 999999999999999999999999998877 555555554445678999999999999999999988753 457
Q ss_pred HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCccc
Q 014631 281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
.+.+..... .+.+++++.+.++.++++. .+.++++.+++++++++++.+.|++ +|++. +..|.+++++|+.++...
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~~ 320 (377)
T 3fdb_A 243 AEHWQQLSPVIKDGASTLGLIAAEAAYRY-GTDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDTT 320 (377)
T ss_dssp HHHHHHSCHHHHCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTSC
T ss_pred HHHHHHHHHhhcCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECcccC
Confidence 777766543 3457888999998888874 3577889999999999999999998 78988 557888888899887531
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+.+++..+++++||.+.||..|+. ++++|++++.+++++++++++|.++++++
T Consensus 321 -----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 321 -----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp -----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred -----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1245677777777999999998875 68999999999999999999999998653
No 22
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.1e-47 Score=364.04 Aligned_cols=349 Identities=21% Similarity=0.316 Sum_probs=291.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.|.++|||+.|.+. ++.++.+.+++.+.+.......|++..+..++|+++++++.+.+|.+++++ +|++|+|+++
T Consensus 23 ~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~ 98 (376)
T 2dou_A 23 RGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQE 98 (376)
T ss_dssp TTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHH
T ss_pred cCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHH
Confidence 47889999999865 456889999999998654346787766789999999999988778777777 9999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++..+++++.++||+|++++|+|+++...++..|.+++.+++ ++++.+|++++++.+.++++++++++|+||||.++|
T Consensus 99 a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~ 176 (376)
T 2dou_A 99 GLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVAD 176 (376)
T ss_dssp HHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCC
T ss_pred HHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCC
Confidence 999999999999999999999999999999999999999887 456678999999888777899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++|++||+++|+||+|+++.+++.....+...+..+++++++|+||.|+++|+|+||++++ +++
T Consensus 177 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~ 248 (376)
T 2dou_A 177 WGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGS--------EEA 248 (376)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEEC--------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecC--------HHH
Confidence 999999999999999999999999998876632222222233457899999999998899999999985 357
Q ss_pred HHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 281 VDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 281 ~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
++.+..... ...+++++.+.++.++|+. .+.++++.+++++++++.+.+.|+++ +. +..|.+++|+|++++..
T Consensus 249 ~~~l~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~-- 322 (376)
T 2dou_A 249 LARLERVKGVIDFNQYAGVLRMGVEALKT-PKEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG-- 322 (376)
T ss_dssp HHHHHHHHHHHCCCSCHHHHHHHHHHHTS-CHHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT--
T ss_pred HHHHHHHHHhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC--
Confidence 777766543 2346788999999999975 35778889999999999999999986 66 44677889999998742
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
.+..++...++++ ||.+.||..|+. ++++|++++.+++++++++++|.+++
T Consensus 323 ---~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 ---VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp ---CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred ---CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 1456777776554 999999988864 67999999988999999999998764
No 23
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=3.8e-47 Score=361.20 Aligned_cols=353 Identities=18% Similarity=0.299 Sum_probs=302.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
+++++|+|+.|.+. +++++.+.+++.+.+.+. ...|++. ..++++++++++.+.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADMD----FEVPQPIQTALKKRIEHP-IFGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSCS----SCCCHHHHHHHHHHHHSC-CCCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 46899999999855 678999999999998864 3467655 5799999999999988877889999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
++.++++++++||+|+++.|+|+++...++..|.+++.+++++++ +|.+|++++++.++++++++++++|+||||.++|
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999886543 4678999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++||+++|+||+|+++.++|....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~ 247 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPN-------E 247 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------H
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCC-------H
Confidence 999999999999999999999999999988776666666553 3678999999999998999999999853 3
Q ss_pred HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecC
Q 014631 279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLN 355 (421)
Q Consensus 279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~ 355 (421)
++.+.+..... ..++++++.+.++.++++. ...++++.+++++++++.+.+.|++ +|++. +..|.++++.|+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 325 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPEGSFLLWIDCS 325 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCceEEEEEEcc
Confidence 56676665543 2347888999999888875 4577888999999999999999997 78988 557888999999887
Q ss_pred cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
... .+..++...|++++||.+.||..|+. .+++|++++.+++++++++++|.+++
T Consensus 326 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 326 ALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp GGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred ccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 531 14677887776678999999998876 48999999999999999999999876
No 24
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.7e-47 Score=365.70 Aligned_cols=373 Identities=25% Similarity=0.411 Sum_probs=306.7
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
++.++++.++.+....+ ...+|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~ 74 (411)
T 2o0r_A 7 LRPYATTVFAEMSALAT-------RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQ 74 (411)
T ss_dssp GGGGSSCHHHHHHHHHH-------TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHH
T ss_pred hHhcCccHHHHHHHHhh-------cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHH
Confidence 44455555655554433 4568999999865 457889999999998764 45898888899999999999
Q ss_pred HhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC-CCccCCHHHHH
Q 014631 99 LNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE-KGWEVDLDGLE 176 (421)
Q Consensus 99 l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~ 176 (421)
+.+.+|.+++++ +|++|+|+++++..++++++++||+|+++.|+|+++...+...|.+++.++.+++ +++.+|+++++
T Consensus 75 ~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~ 154 (411)
T 2o0r_A 75 RRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALR 154 (411)
T ss_dssp HHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHH
T ss_pred HHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHH
Confidence 988888777888 9999999999999999999999999999999999999999999999999987653 34678999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKR 255 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~ 255 (421)
+.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++|....++..++. .++++++.|+||.
T Consensus 155 ~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~ 234 (411)
T 2o0r_A 155 RAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKM 234 (411)
T ss_dssp HHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHH
T ss_pred HhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhh
Confidence 999888899999999999999999999999999999999999999999999887765555555543 4568999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|+++|+|+||++++ +++++.+..... ...+++++.+.++.++|+.. ..++++.+++++++++++.+.|++
T Consensus 235 ~~~~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~ 305 (411)
T 2o0r_A 235 FNCTGWKIGWACGP--------AELIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTE 305 (411)
T ss_dssp TTCTTTCEEEEECC--------HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCccceEEEEeeC--------HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98899999999985 356666655443 23456778888888888743 677888999999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-------------CCCeEEEEecCCHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-------------MKNWLRITFAIEPS 401 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~~~~iRi~~~~~~e 401 (421)
+ ++. +..|.+++++|+.++... ..+..+++..+++++||.+.||..|. ..+++|++++.+++
T Consensus 306 ~-g~~-~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e 380 (411)
T 2o0r_A 306 I-GFA-VHDSYGTYFLCADPRPLG---YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDD 380 (411)
T ss_dssp H-TCE-ECCCCBSSEEEEECGGGT---CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHH
T ss_pred c-CCE-ecCCCeeEEEEEecCCCC---CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHH
Confidence 7 777 446788889999986420 01466777777777899999998772 24689999998999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014631 402 ALEEGLGRIKAFCQRH 417 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~ 417 (421)
++++++++|.+++++.
T Consensus 381 ~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 381 TLDEAIRRLSVLAERP 396 (411)
T ss_dssp HHHHHHHHHGGGGC--
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999999877654
No 25
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=4.5e-47 Score=361.13 Aligned_cols=349 Identities=23% Similarity=0.377 Sum_probs=295.0
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al 122 (421)
.++|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 578999999865 457899999999998763 35788888899999999999988888778888 999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..++++++++||+|++++|+|+++...++..|.+++.++.+.+ ++.+|++++++.++++++++++++|+||||.++|.+
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 183 (386)
T 1u08_A 105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 183 (386)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence 9999999999999999999999999999999999999987643 567999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|+++|++||+++|+||+|+.+.++|....++..++ ..++++++.|+||.|+++|+|+||++++ ++++
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~~~ 255 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAP--------APIS 255 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECC--------HHHH
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcC--------HHHH
Confidence 999999999999999999999999988776544554442 2356899999999998899999999985 3566
Q ss_pred HHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc
Q 014631 282 DSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 282 ~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 360 (421)
+.+..... ...+++.+.+.++..+|+.. +.++++.+++++++++++.+.|+++ ++. +..|.+++|+|+.++...
T Consensus 256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~-- 330 (386)
T 1u08_A 256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-- 330 (386)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence 76665543 23467788888888888753 5778889999999999999999987 887 446788899999886420
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEecCCHHHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
..+..++...+++++||.+.||..|. .++++|++++.+++++++++++|++
T Consensus 331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 01466777777778899999998774 3578999999999999999998864
No 26
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.7e-47 Score=371.79 Aligned_cols=369 Identities=22% Similarity=0.364 Sum_probs=288.7
Q ss_pred CeeeccCCCCCCCCCCC---------------------CcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHh
Q 014631 45 PIIPLGHGDPSAFPCFR---------------------TTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLN 100 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~---------------------~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~ 100 (421)
++|++++|+|......+ .|..+.+++.+.+... ....|++..|.+++|++++++++
T Consensus 64 ~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~ 143 (498)
T 3ihj_A 64 EVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGNSLGSYSASQGVNCIREDVAAYIT 143 (498)
T ss_dssp SCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC----------CCSCHHHHHHHHHHHH
T ss_pred hhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 89999999986432111 2555566667777652 34689999999999999999999
Q ss_pred hhCC-CCCCCCcEEEcCCHHHHHHHHHHHhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 101 SELP-CKLSPDDVYLTAGCKQAIQVILTVLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 101 ~~~~-~~~~~~~i~~~~g~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+++| +++++++|++|+|+++++..++++++++|| .|+++.|+|..+...+...|++++.++++.+++|++|++++
T Consensus 144 ~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 223 (498)
T 3ihj_A 144 RRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISELDAIQVNYYLDEENCWALNVNEL 223 (498)
T ss_dssp HHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHHTTCEEEEEECBGGGTTBCCHHHH
T ss_pred HhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeeccccccCCCCHHHH
Confidence 8884 888999999999999999999999998875 99999999999999999999999999998877899999999
Q ss_pred Hhhhcc-----CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-CcccccccC--------
Q 014631 176 EALADE-----NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVFG-------- 241 (421)
Q Consensus 176 ~~~~~~-----~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-------- 241 (421)
++.+++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++. .+.++..+.
T Consensus 224 e~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~~~~~~~~s~~~~~~~~~~~~~ 303 (498)
T 3ihj_A 224 RRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVYSPDCRFHSFKKVLYEMGPEYS 303 (498)
T ss_dssp HHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCCTTCCCCCHHHHHHHTCHHHH
T ss_pred HHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCccccccCCCCCcCCHHHHHHHhccccc
Confidence 998876 588999999999999999999999999999999999999999999998754 444444321
Q ss_pred CCCCEEEEccccccc-CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhcc-----c-h---
Q 014631 242 STVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNT-----K-E--- 311 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~-~--- 311 (421)
...++++++||||.| |.+|+|+||+++.... +++++.+........+++.+.|.++..+++.. . .
T Consensus 304 ~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~-----~~l~~~l~~~~~~~~~~~~~~q~a~~~~l~~~~~g~~~~~~~~ 378 (498)
T 3ihj_A 304 SNVELASFHSTSKGYMGECGYRGGYMEVINLH-----PEIKGQLVKLLSVRLCPPVSGQAAMDIVVNPPVAGEESFEQFS 378 (498)
T ss_dssp TTCCEEEEEESSSSTTCCSSSCCEEEEEESCC-----HHHHHHHHHHHHHSCCCCHHHHHHHHHHTCCCCTTSTTHHHHH
T ss_pred CceeEEEEeccccccccCcccceEEEEEecCC-----HHHHHHHHHHHhccCCCCHHHHHHHHHHhcCCccCcccHHHHH
Confidence 233578999999999 7799999999852111 45777776665555678889999988888631 1 1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc-------cCCCChHH-HHHHHHhhcCeeEEeC
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL-------EGISDDME-FALQLAKEESVIVLPG 383 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~-~~~~ll~~~gv~v~~g 383 (421)
....+.+++++++++.+.+.|+++||+. +..|.+++|+|++++.+.. .+. ++.+ ++.++++++||.+.||
T Consensus 379 ~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g~-~~~~~~~~~ll~~~gI~v~pG 456 (498)
T 3ihj_A 379 REKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQM-APDMFYCMKLLEETGICVVPG 456 (498)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTTS-CHHHHHHHHHHHHHCBCCEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcCC-CcHHHHHHHHHHHCCEEEEeC
Confidence 2345667889999999999999999998 4589999999987642110 011 2333 3677888899999999
Q ss_pred CCCCC---CCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 384 MAVGM---KNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 384 ~~~~~---~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+.|+. ..++|++++.+++++++++++|.++++++.++
T Consensus 457 ~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 457 SGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp GGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99974 35899999989999999999999999887654
No 27
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=7e-47 Score=361.45 Aligned_cols=357 Identities=18% Similarity=0.276 Sum_probs=298.8
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.++++|+.|.+. +++++.+.+++.+.+... ...|++. ..++|+++++++++.+|.++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 589999999854 567899999999998753 3477654 799999999999887777778899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~ 201 (421)
.+++++.++||+|+++.|+|+++...+...|.+++.++.++++ .|.+|++++++.++ ++++++++++|+||||.++|.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 9999999999999999999999999999999999998875333 46689999999887 678899999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+++++|+++|++||+++|+||+|+.+.++|....++..++. .++++++.|+||.|+++|+|+||+++++ ++
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~-------~~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKN-------PD 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCC-------HH
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECC-------HH
Confidence 99999999999999999999999999887765555655543 4578999999999988999999999863 34
Q ss_pred HHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631 280 IVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 280 ~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++.+...... .++++++.+.++.++++.. ..++++.+++++++++++.+.|++ +|++. +..+.+++++|+.++.
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 334 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA 334 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence 66666655432 2367889999888888743 577888899999999999999998 88988 4478888888998864
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.. .+..++...+++++||.+.||..|+ .++++|++++.+++++++++++|.++++++.++
T Consensus 335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence 21 1466777777657899999998886 367999999977899999999999999887653
No 28
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=5e-47 Score=368.01 Aligned_cols=383 Identities=18% Similarity=0.237 Sum_probs=304.4
Q ss_pred hHHhhhhhh-hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHH
Q 014631 17 EHITATATL-TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AEFDCYSPSVGILPA 91 (421)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~l 91 (421)
..+..+++. ..+.+..+......+..+.++|+|+.|++. ++.++.+.+++.+++.. .....|++..|..+|
T Consensus 41 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 116 (449)
T 3qgu_A 41 ENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDTT----EPLPKYIADAMAKAAAGLATREGYSGYGAEQGQGAL 116 (449)
T ss_dssp HHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----CCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCHHH
T ss_pred HHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCCC----CCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcHHH
Confidence 345555553 334555555544444458899999999855 57899999999999874 344589888999999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce----------eEeee
Q 014631 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE----------IRHFD 161 (421)
Q Consensus 92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~----------~~~~~ 161 (421)
|+++++++. +|+++++++|++|+|+++++..+ ..++++||+|++++|+|+++...++..|.+ ++.++
T Consensus 117 r~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~~~ 193 (449)
T 3qgu_A 117 REAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEYMV 193 (449)
T ss_dssp HHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEEEE
T ss_pred HHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEEEe
Confidence 999999997 77778899999999999999998 788899999999999999999999999988 89999
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
++.++++..+++++ ++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++....++..++
T Consensus 194 ~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~ 268 (449)
T 3qgu_A 194 CNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIP 268 (449)
T ss_dssp CCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGST
T ss_pred cccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhcc
Confidence 87665655555432 5788999999999999999999999999999999999999999999998876555666654
Q ss_pred C-CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 242 S-TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 242 ~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
. .++++++.||||.|+++|+|+||+++++.........+...+.... ..+.+++++.+.++.+++......++++.++
T Consensus 269 ~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 348 (449)
T 3qgu_A 269 GADEVAIETCSFSKYAGFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMNAMIK 348 (449)
T ss_dssp TGGGTEEEEEECSGGGTCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred CCCCcEEEEecchhhcCCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHHHHHH
Confidence 4 4568999999999999999999999965321100000111222222 2344788899999988887533467888999
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA 397 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~ 397 (421)
+++++++++.+.|+++ |+. +..|.+++|+|+.++ . .++.+++..+++++||.+.||..|+. .+++||++.
T Consensus 349 ~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iRis~~ 420 (449)
T 3qgu_A 349 FYKENAQILKTTFTEM-GFS-VYGGDDAPYIWVGFP-G-----KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVRASAF 420 (449)
T ss_dssp HHHHHHHHHHHHHHHT-TCC-EEESSSSSEEEEECT-T-----SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECC
T ss_pred HHHHHHHHHHHHHHHC-CCe-eeCCCCeeEEEEECC-C-----CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEEEEec
Confidence 9999999999999988 887 446778999999987 2 15678888888878999999998875 589999998
Q ss_pred CCHHHHHHHHHHHHHHHHHhhh
Q 014631 398 IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+++++++++++|++++++...
T Consensus 421 ~~~e~i~~~l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 421 GSRENILEAVRRFKEAYGKRNA 442 (449)
T ss_dssp SCHHHHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHHHHHHHhcCc
Confidence 8999999999999999876543
No 29
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=2e-47 Score=368.61 Aligned_cols=358 Identities=23% Similarity=0.375 Sum_probs=299.0
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQ 120 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~ 120 (421)
.++|+|+.|.+. ++.++.+.+++.+++... ....|++..|..++++++++++.+.+|.+++++ +|++|+|+++
T Consensus 37 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~ 112 (429)
T 1yiz_A 37 YKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYE 112 (429)
T ss_dssp HCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHH
T ss_pred CCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHH
Confidence 578999999865 457899999999998752 235788878899999999999988778777888 9999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC--------CccCCHHHHHhhhccCceEEEEeCCC
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK--------GWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~--------~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
++..++++++++||+|+++.|+|+++...++..|.+++.++.+.++ ++.+|++++++.++++++++++++|+
T Consensus 113 a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~ 192 (429)
T 1yiz_A 113 ALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPH 192 (429)
T ss_dssp HHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCC
Confidence 9999999999999999999999999999999999999999986543 56799999999998888999999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
||||.++|.+++++|+++|++||+++|+||+|+++.++|....++..++ ..++++++.|+||.|+++|+|+||++++
T Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~-- 270 (429)
T 1yiz_A 193 NPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGP-- 270 (429)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESC--
T ss_pred CCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeC--
Confidence 9999999999999999999999999999999999988776555555553 3457899999999998899999999985
Q ss_pred CcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc-----cc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 272 SGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN-----TK-EDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-----~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+++++.+..... .+.+++++.+.++.++|+. .. +.++++.+++++++++.+.+.|+++ ++. +..|
T Consensus 271 ------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~ 342 (429)
T 1yiz_A 271 ------EALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTVP 342 (429)
T ss_dssp ------HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEEC
T ss_pred ------HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCC
Confidence 356676665542 3457788899988888875 32 5678889999999999999999987 777 4467
Q ss_pred CceeEEEEecCcccc-------cCCCChHHHHHHHHhhcCeeEEeCCCCCC-------CCeEEEEecCCHHHHHHHHHHH
Q 014631 345 EGSMFVMVKLNLSLL-------EGISDDMEFALQLAKEESVIVLPGMAVGM-------KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~iRi~~~~~~e~l~~~~~~l 410 (421)
.+|+|+|++++.... .+..+..+++.++++++||.+.||..|.. ++++|++++.+++++++++++|
T Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l 422 (429)
T 1yiz_A 343 QGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEIL 422 (429)
T ss_dssp SBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHHH
T ss_pred CcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHHH
Confidence 788999999874200 00013456777777788999999987753 5799999999999999999999
Q ss_pred HHHHH
Q 014631 411 KAFCQ 415 (421)
Q Consensus 411 ~~~~~ 415 (421)
.++++
T Consensus 423 ~~~l~ 427 (429)
T 1yiz_A 423 RKWKG 427 (429)
T ss_dssp HHHSC
T ss_pred HHhcc
Confidence 98764
No 30
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=3.3e-47 Score=360.77 Aligned_cols=359 Identities=19% Similarity=0.329 Sum_probs=297.2
Q ss_pred hhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631 23 ATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSE 102 (421)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~ 102 (421)
+++.++++...+++ ... .+ ++|||+.|.+. ++.|+.+.+++.+.+.. ...|++..|..++|+++++++.+.
T Consensus 5 ~~~~~~~~~~~~~~-~~~-~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~g~~~lr~~la~~l~~~ 75 (376)
T 3ezs_A 5 EPYPFERLRALLKE-ITP-KK-RGLDLGIGEPQ----FETPKFIQDALKNHTHS--LNIYPKSAFEESLRAAQRGFFKRR 75 (376)
T ss_dssp CCCHHHHHHHHHTT-CCC-SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGGG--GGSCCCTTCCHHHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHh-hhc-cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhhh--cCCCCCCCCCHHHHHHHHHHHHHH
Confidence 35566677665543 322 35 99999999865 56789999999988733 458988889999999999999988
Q ss_pred CCCCCCCCcEEEcCCHHHHHHHHHHHhcCC--CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 103 LPCKLSPDDVYLTAGCKQAIQVILTVLARP--GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
+|..+++++|++|+|+++++..++++++++ ||+|+++.|+|+++...++..|.+++.+++++++++ ++ ++++.+.
T Consensus 76 ~g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~--~~-~l~~~~~ 152 (376)
T 3ezs_A 76 FKIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDF--TP-SLNEKEL 152 (376)
T ss_dssp HSCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTS--CC-CCCHHHH
T ss_pred hCCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCc--ch-hHHhhhc
Confidence 887778999999999999999999999999 999999999999999999999999999998765443 33 5666666
Q ss_pred cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-----CCCCEEEEcccccc
Q 014631 181 ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-----STVPVITLGSMSKR 255 (421)
Q Consensus 181 ~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~ 255 (421)
++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++.....+...+ ..++++++.|+||.
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 232 (376)
T 3ezs_A 153 QEVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKR 232 (376)
T ss_dssp HHCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTT
T ss_pred cCCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhc
Confidence 6789999999999999999999999999999999999999999999988774332222211 45678999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
||++|+|+||++++ +++++.+..... ...+++++.+.++.++++. ..++++.+++++++++.+.+.|+
T Consensus 233 ~g~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~- 301 (376)
T 3ezs_A 233 SSAPGLRSGFIAGD--------SRLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK- 301 (376)
T ss_dssp TTCGGGCCEEEEEC--------HHHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST-
T ss_pred cCCccceeEEEeeC--------HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc-
Confidence 98999999999985 467777776644 2457888999999999875 45688889999999999999987
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEecCCHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~~~~e~l~~~~~~l 410 (421)
++. .|.+++|+|+.++ +..++...+++++||.+.||..|+ ..+++|++++.+++++++++++|
T Consensus 302 --~~~---~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l 368 (376)
T 3ezs_A 302 --NTL---IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEII 368 (376)
T ss_dssp --TCC---CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHH
T ss_pred --CCC---CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 443 5788999999886 366777777665899999999887 35899999988999999999999
Q ss_pred HHHHHHh
Q 014631 411 KAFCQRH 417 (421)
Q Consensus 411 ~~~~~~~ 417 (421)
.++++++
T Consensus 369 ~~~l~~~ 375 (376)
T 3ezs_A 369 ETYRENH 375 (376)
T ss_dssp HHHHCC-
T ss_pred HHHHHhc
Confidence 9988653
No 31
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=2.9e-46 Score=358.16 Aligned_cols=378 Identities=23% Similarity=0.373 Sum_probs=308.9
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
..++.++++.++++...+++.. ..++++++|+.|.+. ++.++.+.+++ +.+... ...|++..|..++|++++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~la 89 (409)
T 2gb3_A 18 DRVLLTEESPIRKLVPFAEMAK--KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAFA 89 (409)
T ss_dssp HHHHSCCCCTTGGGHHHHHHHH--HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHHH
T ss_pred HHhhcCCccHHHHHHHHHHHHH--hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHHH
Confidence 3466666777777666554332 237889999999875 45678899999 887653 357888888999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
++++..+|+++++++|++|+|+++++..+++++.++||+|+++.|+|+++...++..|.+++.++.++++++.+ +++++
T Consensus 90 ~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l~ 168 (409)
T 2gb3_A 90 SYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNLE 168 (409)
T ss_dssp HHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTGG
T ss_pred HHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHHH
Confidence 99999888888889999999999999999999999999999999999999999999999999998865445555 88999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
+.+.++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++.....+..+ .+++++++|+||.|
T Consensus 169 ~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~ 246 (409)
T 2gb3_A 169 SFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKKF 246 (409)
T ss_dssp GGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSC--CTTEEEEEESTTTT
T ss_pred HhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccC--CCCEEEEecchhcc
Confidence 9888888999999999999999999999999999999999999999999988766322112211 34679999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
+++|+|+||+++++ +++.+.+........+++++.+.++.++|+. ...++++.+++++++++.+.+.|+++
T Consensus 247 g~~G~r~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~- 317 (409)
T 2gb3_A 247 SACGARVGCLITRN-------EELISHAMKLAQGRLAPPLLEQIGSVGLLNL-DDSFFDFVRETYRERVETVLKKLEEH- 317 (409)
T ss_dssp TCGGGCCEEEECSC-------HHHHHHHHHHHHHSCCCCHHHHHHHHHHHTC-CHHHHHHHHHHHHHHHHHHHHHHHHT-
T ss_pred CCccceEEEEEECc-------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHHc-
Confidence 88999999999863 2466666554432117788999999888864 36778888999999999999999988
Q ss_pred CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhh-----cCeeEEeCCCCCC-----CCeEEEEecCCHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKE-----ESVIVLPGMAVGM-----KNWLRITFAIEPSALEEG 406 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~iRi~~~~~~e~l~~~ 406 (421)
++.++..|.+++++|+.++. .+..++...++++ +||.+.||..|+. ++++|+++++++++++++
T Consensus 318 g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~~ 391 (409)
T 2gb3_A 318 GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSRA 391 (409)
T ss_dssp TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHHH
T ss_pred CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHHH
Confidence 88741478888999988861 1466777777655 5999999987753 579999999999999999
Q ss_pred HHHHHHHHHHhhhc
Q 014631 407 LGRIKAFCQRHAKQ 420 (421)
Q Consensus 407 ~~~l~~~~~~~~~~ 420 (421)
+++|+++++++++.
T Consensus 392 ~~~l~~~l~~~~~~ 405 (409)
T 2gb3_A 392 IDVLMEGLKMFCSS 405 (409)
T ss_dssp HHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHhhhc
Confidence 99999999887654
No 32
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=3e-47 Score=366.73 Aligned_cols=375 Identities=21% Similarity=0.289 Sum_probs=299.0
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHH---------HHHHhcCCCCCCCCCCC
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAV---------VDAVRSAEFDCYSPSVG 87 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~---------~~~~~~~~~~~y~~~~g 87 (421)
..++.++++.++.+....++. ++++|+|+.|.|+... +|. .....++ .+.... ...|++..|
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~-----~~~~i~l~~G~p~~~~-~p~-~~~~~~~~~~~~~~~~~~~~~~--~~~Y~~~~G 79 (425)
T 2r2n_A 9 AASAARNPSPIRTMTDILSRG-----PKSMISLAGGLPNPNM-FPF-KTAVITVENGKTIQFGEEMMKR--ALQYSPSAG 79 (425)
T ss_dssp HHHHTCCCCSGGGHHHHHHHS-----CTTCEECCCCCCCGGG-CSE-EEEEEEETTSCCEEECHHHHHH--HTSCCCTTC
T ss_pred HHHhcCCCchHHHHHHHhhcC-----CCCeEEcCCcCCCchh-CCH-HHHHHHHhhcccccccccchhh--hcCCCCCCC
Confidence 567777888888888766531 3678999999987321 121 1000000 011111 147999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCC-------CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEee
Q 014631 88 ILPARRAIADYLNSELPCKLS-------PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHF 160 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~ 160 (421)
++++|+++++++.+.+|...+ +++|++|+|+++++.+++++++++||+|++++|+|+++...++..|.+++.+
T Consensus 80 ~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v 159 (425)
T 2r2n_A 80 IPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQSLHPLGCNIINV 159 (425)
T ss_dssp CHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHGGGTCEEEEE
T ss_pred CHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEe
Confidence 999999999999988887663 3799999999999999999999999999999999999999999999999999
Q ss_pred eccCCCCccCCHHHHHhhhc------------cCceEEEE-eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALAD------------ENTVAMVI-VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~------------~~~~~i~~-~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
+++. .++|++++++.++ ++++++++ ++||||||.++|.+++++|+++|++||+++|+||+|+++
T Consensus 160 ~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~li~De~~~~~ 236 (425)
T 2r2n_A 160 ASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLIIEDDPYYFL 236 (425)
T ss_dssp CEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred CcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCcccc
Confidence 8753 2589999999876 35677755 688999999999999999999999999999999999999
Q ss_pred ccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHh
Q 014631 228 TFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIF 306 (421)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l 306 (421)
.++|....++..++..+++++++||||+|+ +|+|+||++++ +++++.+..... ...+++.+.|.++.++|
T Consensus 237 ~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l 307 (425)
T 2r2n_A 237 QFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGP--------KPLIERVILHIQVSTLHPSTFNQLMISQLL 307 (425)
T ss_dssp BSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEE--------HHHHHHHHHHHHTTTCSSCHHHHHHHHHHH
T ss_pred cCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecC--------HHHHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 888766666666766678999999999997 99999999996 357777766543 34578899999999888
Q ss_pred hccc----hhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE
Q 014631 307 KNTK----EDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381 (421)
Q Consensus 307 ~~~~----~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 381 (421)
+... ..++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|+.++.. .+..+++..++.++||.+.
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~~~l~~~gv~v~ 382 (425)
T 2r2n_A 308 HEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIEEKAVKMGVLML 382 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHHTHHHHTTEECE
T ss_pred HhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHHHHHHHCCcEEe
Confidence 7521 366788889999999999999987 67763244788999999999742 1345554556678899999
Q ss_pred eCCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 382 PGMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 382 ~g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
||..|+. .+++|++++ .+++++++++++|.+++++.
T Consensus 383 pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 383 PGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp EGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred chhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 9998864 478999998 89999999999999998764
No 33
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=4.3e-46 Score=354.93 Aligned_cols=351 Identities=21% Similarity=0.342 Sum_probs=300.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.|++. +++++.+.+++.+.+... ...|++ +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 31 TNDLLPMWVADMD----FKAAPCIIDSLKNRLEQE-IYGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI 103 (391)
T ss_dssp CSCSEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCCC----CCCCHHHHHHHHHHHhCC-CCCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence 6889999999855 678899999999998763 345654 468999999999999888778899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc--CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL--PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
+.++.+++++||+|+++.|+|+++...++..|.+++.++++ .++++.+|++++++.+++ ++++++++|+||||.++|
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999999999987 445677999999999987 899999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++||+++|+||+|+++.++|....++..++. .++++++.|+||.++++|+|+||+++++ +
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~-------~ 255 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPD-------E 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCC-------H
Confidence 999999999999999999999999999988776666666554 3678999999999989999999999864 3
Q ss_pred HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecC
Q 014631 279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLN 355 (421)
Q Consensus 279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~ 355 (421)
++.+.+..... .+++++++.+.++..+++. .+.++++.+++++++++.+.+.|++ +|++. +..+.++++.|+.++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 333 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS 333 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence 46666665532 2347888899988888875 4567888999999999999999997 78988 557888899999887
Q ss_pred cccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 356 LSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 356 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
... .+..++...|++++||.+.||..|+. ++++|++++++++++++++++|.+++
T Consensus 334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 421 14677777776555999999988875 48999999999999999999999876
No 34
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=8.1e-46 Score=350.46 Aligned_cols=361 Identities=25% Similarity=0.436 Sum_probs=301.1
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
.++..+++.++++....++.. ..+.++|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~--~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~la~ 77 (370)
T 2z61_A 5 RLLNFESFEVMDILALAQKLE--SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKISE 77 (370)
T ss_dssp HHHHCCCCTTHHHHHHHHHHH--HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHH
T ss_pred hhhhccccHHHHHHHHHHHHH--hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHHHH
Confidence 355566777888777665432 237889999999875 345789999999998764 3578888889999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++++.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++ +|++++++
T Consensus 78 ~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l~~ 149 (370)
T 2z61_A 78 LYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESLEE 149 (370)
T ss_dssp HHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHHHH
T ss_pred HHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHHHH
Confidence 9999888888899999999999999999999999999999999999999999999999988876 58999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC-CCCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG-STVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~ 256 (421)
.++++++++++++|+||||.+++.+ |.++|++||+++|+||+|+.+.++|. ..++..++ ..+++++++|+||.+
T Consensus 150 ~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK~~ 224 (370)
T 2z61_A 150 ALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSKLY 224 (370)
T ss_dssp HCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTTTT
T ss_pred hcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChhcc
Confidence 9988889999999999999999977 89999999999999999999887663 33444442 345789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+++|+|+||++++ +++.+.+..... ...+++++.+.++.++|+.....++++.+++++++++++.+.|+++
T Consensus 225 ~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 296 (370)
T 2z61_A 225 AMTGWRIGYVISN--------DEIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVKDF 296 (370)
T ss_dssp TCGGGCCEEEECC--------HHHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCccceEEEEEEC--------HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 8899999999986 356777766543 2357888999998888864125678888999999999999999988
Q ss_pred CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 336 PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 336 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
|+. +..|.+++++|+.++. +..++...+++++||.+.||..|+. .+++|++++++++++++++++|.++
T Consensus 297 -g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~~~ 367 (370)
T 2z61_A 297 -GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIKEF 367 (370)
T ss_dssp -TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHHHH
T ss_pred -CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHHHH
Confidence 887 4467888899988863 3567777776678999999988874 6799999999999999999999988
Q ss_pred HH
Q 014631 414 CQ 415 (421)
Q Consensus 414 ~~ 415 (421)
++
T Consensus 368 l~ 369 (370)
T 2z61_A 368 LN 369 (370)
T ss_dssp HC
T ss_pred Hh
Confidence 74
No 35
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=4.6e-46 Score=354.66 Aligned_cols=353 Identities=19% Similarity=0.309 Sum_probs=293.0
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHH-HHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILP-ARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~-l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
.++|+|+.|.+. +++++.+.+++.+.+... ...|++. ..+ +|+++++++++.+|..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 478999999864 567899999999998653 3477664 678 99999999998888778899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhcc-CceEEEEeCCCCCcccccC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~ 200 (421)
+.++++++++||+|+++.|+|+++...++..|.+++.++.++++ +|.+|++++++.+++ +++++++++|+||||.++|
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 467899999998875 7888989999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI 280 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 280 (421)
.+++++|+++|++||+++|+||+|+++.++|....++..++..-.-. +.|+||.|+++|+|+||+++++ +++
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~-------~~~ 252 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIEN-------SSS 252 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECS-------HHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECC-------HHH
Confidence 99999999999999999999999999988776555555554321013 8899999988999999999863 346
Q ss_pred HHHHhhhcc--c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631 281 VDSIKGYLN--I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 281 ~~~~~~~~~--~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
.+.+..... . +.+++++.+.++.++++. ...++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQ-GAPWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP 330 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence 666655443 2 237788888888888874 3567888899999999999999998 78888 4477888888998864
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
.. .+..++...+++++||.+.||..|+. ++++|++++.+++++++++++|.++++++
T Consensus 331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 21 14667777776578999999988863 57999999988999999999999998775
No 36
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=9.7e-47 Score=363.26 Aligned_cols=374 Identities=18% Similarity=0.266 Sum_probs=302.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia 96 (421)
++.++.+.++.+... ..++++|||+.|.|.. ...+++.+.+++.+.++.. ....|++..|..++|++++
T Consensus 25 ~~~~~~~~~~~~~~~-------~~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~la 95 (425)
T 1vp4_A 25 GQNMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQQIL 95 (425)
T ss_dssp HHTCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHHHHH
T ss_pred hhcCCCcHHHHHHHh-------ccCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHHHHH
Confidence 334444555554432 1257899999998762 2346788999999988753 1357888889999999999
Q ss_pred HHHhhhCCCC-CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 97 DYLNSELPCK-LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 97 ~~l~~~~~~~-~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+++.+++|.. +++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++.+++ ++|++++
T Consensus 96 ~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l 172 (425)
T 1vp4_A 96 KLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDLNVL 172 (425)
T ss_dssp HHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHH
T ss_pred HHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCHHHH
Confidence 9997766766 77899999999999999999999999999999999999999999999999999988642 4899999
Q ss_pred Hhhhcc--------CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631 176 EALADE--------NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246 (421)
Q Consensus 176 ~~~~~~--------~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (421)
++.+++ ++++| ++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.++|....++..++..+++
T Consensus 173 ~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 252 (425)
T 1vp4_A 173 ERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERV 252 (425)
T ss_dssp HHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTE
T ss_pred HHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCE
Confidence 998865 67777 478999999999999999999999999999999999999998877655555555555678
Q ss_pred EEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDT 324 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~ 324 (421)
++++||||.|+ +|+|+||++++ +++++.+..... ...+++++.+.++.++|+... +.++++.+++++++
T Consensus 253 i~~~s~sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (425)
T 1vp4_A 253 VLLNTFSKVLA-PGLRIGMVAGS--------KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELYRRK 323 (425)
T ss_dssp EEEEESTTTTC-GGGCEEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHHHHH
T ss_pred EEEeccccccc-cccceEEEeeC--------HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Confidence 99999999998 99999999985 356676665543 234678899999999987532 56778888999999
Q ss_pred HHHHHHHhhc-CC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEe
Q 014631 325 ADICYDRIKE-IP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITF 396 (421)
Q Consensus 325 ~~~~~~~l~~-~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~ 396 (421)
++.+.+.|++ .| ++. +..|.+|+|+|+.++.. .+..+++..++++ ||.+.||..|+. .+++|+++
T Consensus 324 ~~~l~~~L~~~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iRis~ 396 (425)
T 1vp4_A 324 RTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMRLSF 396 (425)
T ss_dssp HHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEEEEC
T ss_pred HHHHHHHHHHhCCCCCceE-EecCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEEEEe
Confidence 9999999987 35 577 44688899999998742 1345667766554 999999988753 57899999
Q ss_pred cC-CHHHHHHHHHHHHHHHHHhhhc
Q 014631 397 AI-EPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 397 ~~-~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+. +++++++++++|.++++++.++
T Consensus 397 ~~~~~e~i~~~l~~l~~~l~~~~~~ 421 (425)
T 1vp4_A 397 CLPPDEKIVEGIKRLREVVLEYGKE 421 (425)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 94 7999999999999999887654
No 37
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=2e-46 Score=360.60 Aligned_cols=353 Identities=18% Similarity=0.277 Sum_probs=302.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.|++. ++.++.+.+++.+++... ...|++. ..++++++++++.+.+|.++++++|++|+|+++|+
T Consensus 60 g~~~i~~~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADMD----FLPVPEIKEAIINYGREH-IFGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCCC----SCCCHHHHHHHHHHHHHC-CSSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCCC----CCCCHHHHHHHHHHHhcC-CcCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 6799999999755 678999999999998764 3467654 38999999999999888888899999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~ 200 (421)
+.+++++.++||+|+++.|+|+++...+...|.+++.++++ .+.++.+|++++++.++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999986 45567789999999987 78999999999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++||+++|+||+|+++.++|....++..+.. .++++++.|+||+|+++|+|+||+++++ +
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~-------~ 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQN-------E 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCS-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCC-------H
Confidence 999999999999999999999999999988876666666544 4678999999999988999999999863 3
Q ss_pred HHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCc
Q 014631 279 RIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 279 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
++.+.+..... .+++++++++.++.++++. .+.++++..++++++++++.+.|+++|++. +..|.++++.|+.++.
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~ 363 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA 363 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence 56666665542 2347889999999888874 467789999999999999999999878888 4478889999999875
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.. .+..++...+++++||.+.+|..|+. .+++|++++++++++++++++|.++++
T Consensus 364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 21 13557777776778999999998865 689999999999999999999998865
No 38
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=1.4e-45 Score=353.31 Aligned_cols=378 Identities=20% Similarity=0.318 Sum_probs=306.3
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia 96 (421)
++.++++.++.++...++. ...|.++|||+.|.|.. ...+++.+.+++.+++.+. ... |++..|..++|++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~--~~~g~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~~~l~~~la 85 (407)
T 2zc0_A 11 ANWIKGSALADVMKKASEL--QKKGVKLISLAAGDPDP--ELIPRAVLGEIAKEVLEKEPKSVM-YTPANGIPELREELA 85 (407)
T ss_dssp GGGCCCCHHHHHHHHHHHH--HHSSCCCEECCSCCCCT--TTSCHHHHHHHHHHHHHHCGGGGS-CCCTTCCHHHHHHHH
T ss_pred hccCCchHHHHHHHhhhcc--cCCCCceEeCCCCCCCc--hhCCHHHHHHHHHHHHhhcccccc-CCCCCCCHHHHHHHH
Confidence 4445566677777655421 11366899999998763 2346789999999988763 234 888889999999999
Q ss_pred HHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 97 DYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
+++.+.+|.++++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++.+++ ++|+++++
T Consensus 86 ~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~---~~d~~~l~ 162 (407)
T 2zc0_A 86 AFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND---GMRVDLLE 162 (407)
T ss_dssp HHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECHHHHH
T ss_pred HHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---CCCHHHHH
Confidence 999887887778899999999999999999999999999999999999999999999999999987542 38999999
Q ss_pred hhhc----c--CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEE
Q 014631 177 ALAD----E--NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITL 249 (421)
Q Consensus 177 ~~~~----~--~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 249 (421)
+.++ + ++++| ++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++....++..++..++++++
T Consensus 163 ~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 242 (407)
T 2zc0_A 163 EKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVA 242 (407)
T ss_dssp HHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEE
T ss_pred HHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEE
Confidence 9887 5 67776 467899999999999999999999999999999999999988877655556666555678999
Q ss_pred cccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccc-h-hHHHHHHHHHHHHHH
Q 014631 250 GSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTK-E-DFFSKIVDILRDTAD 326 (421)
Q Consensus 250 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~~~~~ 326 (421)
+|+||.++ +|+|+||++++ +++++.+...... ..+++++.+.++..+++... + .++++.+++++++++
T Consensus 243 ~s~sK~~~-~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 313 (407)
T 2zc0_A 243 GTLSKVLG-TGFRIGWIIAE--------GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGALLGYKEKRD 313 (407)
T ss_dssp EESTTTTC-TTSCCEEEECC--------HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHHHHHHHHHH
T ss_pred cccccccC-CCcceEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 99999998 99999999985 3566776655432 34568889999888887532 3 567778888999999
Q ss_pred HHHHHhhc-CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecC-CH
Q 014631 327 ICYDRIKE-IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAI-EP 400 (421)
Q Consensus 327 ~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~-~~ 400 (421)
++.+.|++ .|++. +..|.+++|+|+.++.. .+..++...+++++||.+.||..|.. .+++|++++. ++
T Consensus 314 ~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~ 387 (407)
T 2zc0_A 314 IMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIRLNFSRPSK 387 (407)
T ss_dssp HHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEEEECSSSCT
T ss_pred HHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEEEEeCCCCH
Confidence 99999987 57777 44678889999998642 14667777776555999999988753 5789999984 78
Q ss_pred HHHHHHHHHHHHHHHHhhh
Q 014631 401 SALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 401 e~l~~~~~~l~~~~~~~~~ 419 (421)
+++++++++|.++++++.+
T Consensus 388 ~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 388 EEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp THHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987654
No 39
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=3.7e-46 Score=360.14 Aligned_cols=379 Identities=18% Similarity=0.283 Sum_probs=296.6
Q ss_pred hHHhhhhhh-hHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CCCCCCCCCCCCHHH
Q 014631 17 EHITATATL-TVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AEFDCYSPSVGILPA 91 (421)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~y~~~~g~~~l 91 (421)
..+.++++. ..+.+..+......+..+.++|+|++|++. ++.++.+.+++.+++.. .....|++..|..++
T Consensus 28 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l 103 (432)
T 3ei9_A 28 SNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPL 103 (432)
T ss_dssp HHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHH
T ss_pred hHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHH
Confidence 345555553 556666655555444457799999999866 58899999999999874 233578888899999
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCc------------eeEe
Q 014631 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRL------------EIRH 159 (421)
Q Consensus 92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~ 159 (421)
++++++|+.+ ++++++++|++|+|+++++..+ ..++++||.|++++|+|+++...++..|. +++.
T Consensus 104 ~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 180 (432)
T 3ei9_A 104 RAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGNIEY 180 (432)
T ss_dssp HHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETTCEE
T ss_pred HHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCceEE
Confidence 9999999974 4567789999999999999985 67778999999999999999988887774 5777
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
++++.++++..++++ .++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++.. .++..
T Consensus 181 ~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~~~~ 254 (432)
T 3ei9_A 181 MRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RSIFE 254 (432)
T ss_dssp EECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SSGGG
T ss_pred eccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CChhh
Confidence 887655455455443 357889999999999999999999999999999999999999999998876543 23334
Q ss_pred cC-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 240 FG-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 240 ~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
+. ..+++++++||||.|+++|+|+||+++++.........+.+.+.... ..+.+++++++.++.+++......++++.
T Consensus 255 ~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 334 (432)
T 3ei9_A 255 IPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKV 334 (432)
T ss_dssp STTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHH
T ss_pred cCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHH
Confidence 33 24578999999999999999999999975320000001234444433 23456888999998888864334678889
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEE
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRIT 395 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~ 395 (421)
+++++++++++.+.|+++ |+. +..+.+++|+|+.++. .++.+++..+++++||.+.||..|+. .+++|+|
T Consensus 335 ~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~iRis 406 (432)
T 3ei9_A 335 IGFYKENTNIIIDTFTSL-GYD-VYGGKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFVRVS 406 (432)
T ss_dssp HHHHHHHHHHHHHHHHHT-TCC-EEECSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHC-Cce-ecCCCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEEEEE
Confidence 999999999999999988 887 4366788999999872 14678888888888999999998875 6899999
Q ss_pred ecCCHHHHHHHHHHHHHHHHH
Q 014631 396 FAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 396 ~~~~~e~l~~~~~~l~~~~~~ 416 (421)
+..+++++++++++|++--..
T Consensus 407 ~~~~~e~l~~~l~rl~~~~~~ 427 (432)
T 3ei9_A 407 AFGHRENILEACRRFKQLYKH 427 (432)
T ss_dssp CCSCHHHHHHHHHHHHHHHTT
T ss_pred ecCCHHHHHHHHHHHHHHhhh
Confidence 999999999999999876443
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=2.7e-46 Score=361.63 Aligned_cols=373 Identities=18% Similarity=0.213 Sum_probs=308.5
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
+..+.++++.++....... ...+.++|+|+.|.+. +++++.+.+++.+.+.......|++..|+.++|+++++++
T Consensus 21 ~~~~~~~~~~~~~~~~~~~-~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~ 95 (437)
T 3g0t_A 21 KDLGMASIRDLVALVTNLE-KATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFA 95 (437)
T ss_dssp SCGGGCCHHHHHHHHHHHH-HHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHH
T ss_pred hcCCCcHHHHHHHHHHHHH-HhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHH
Confidence 3445677888777665432 2237899999999965 5788999999999988644368998889999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc--CCCC--eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLA--RPGA--NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~--~~gd--~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
+..+|..+++++|++|+|++++++.++.++. ++|| +|++++|+|.++...++..|++++.++++ ++++.+|++++
T Consensus 96 ~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l 174 (437)
T 3g0t_A 96 KLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKL 174 (437)
T ss_dssp HHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHH
T ss_pred HHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHH
Confidence 9888888899999999999999999999998 9999 99999999999999999999999999986 45677899999
Q ss_pred Hhhh-ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc----cc-cccCC-CCCEEE
Q 014631 176 EALA-DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV----RM-GVFGS-TVPVIT 248 (421)
Q Consensus 176 ~~~~-~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~ 248 (421)
++.+ +++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.+++.... ++ ..+.. .+++++
T Consensus 175 ~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 254 (437)
T 3g0t_A 175 ESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYIL 254 (437)
T ss_dssp HHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEE
T ss_pred HHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEE
Confidence 9998 67889999999999999999999999999999999999999999999887643211 11 33332 567899
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHH-H-----------------Hhhhcc-cccCCchHHHHHHHHHhhcc
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD-S-----------------IKGYLN-ISSGPATFVQGAVPQIFKNT 309 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~-----------------~~~~~~-~~~~~~~~~~~~~~~~l~~~ 309 (421)
+.|+||.++++|+|+||++++ +++++ . +..... ...+++.+.+.++..+|+.
T Consensus 255 ~~s~sK~~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~- 325 (437)
T 3g0t_A 255 ALSSSKAFSYAGQRIGVLMIS--------GKLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKA- 325 (437)
T ss_dssp EEESTTTTSCGGGCCEEEEEC--------HHHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHH-
T ss_pred EEcCccCCCCccceeEEEEEC--------HHHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhC-
Confidence 999999998899999999986 34555 5 544432 3457888999999998875
Q ss_pred chhH---HHHHHHHHHHHHHHHHHHhhcCCCccccC------CC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631 310 KEDF---FSKIVDILRDTADICYDRIKEIPCITCPR------KP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379 (421)
Q Consensus 310 ~~~~---~~~~~~~~~~~~~~~~~~l~~~~g~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 379 (421)
...+ +++.+++++++++.+.+.|+++ |+. +. .| .+++|+|+.++. .+..++...|+ ++||.
T Consensus 326 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~ 396 (437)
T 3g0t_A 326 CNDGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMC 396 (437)
T ss_dssp HHTTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEE
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeE
Confidence 2223 8889999999999999999998 887 43 24 789999999872 14667777664 56999
Q ss_pred EEeCCCCCCC--CeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631 380 VLPGMAVGMK--NWLRITFA-IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 380 v~~g~~~~~~--~~iRi~~~-~~~e~l~~~~~~l~~~~~~ 416 (421)
+.||..|+.. +++|+|++ .+++++++++++|++++++
T Consensus 397 v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 397 AITLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp CEESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred EeeccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 9999988653 78999999 5899999999999998754
No 41
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=1.6e-46 Score=361.22 Aligned_cols=368 Identities=17% Similarity=0.168 Sum_probs=294.5
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCC---CCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHG---DPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARR 93 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~ 93 (421)
++++.+++++++++...+++.. .+++|||+.| +|. ...++++.+++++.+.+.......|++..|.+++|+
T Consensus 26 ~~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 99 (420)
T 4f4e_A 26 SAVELAPRDPILGLNEAFNADT----RPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAAYDA 99 (420)
T ss_dssp TTCCCCCCCHHHHHHHHHHHCC----CSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHHHHH
T ss_pred hcCCcCCCChHHHHHHHHHhcC----CCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHHHHH
Confidence 3466778899999998887643 5689999999 444 224556999999999998755568999999999999
Q ss_pred HHHHHHhhhCCCCCCCC--cEEEcCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 94 AIADYLNSELPCKLSPD--DVYLTAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 94 ~ia~~l~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
++++++....+..++++ +|++|+|++++++.+++ .++++||+|++++|+|.++...++..|.+++.++...+++++
T Consensus 100 ~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~ 179 (420)
T 4f4e_A 100 SVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAKTNG 179 (420)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETTTTE
T ss_pred HHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccccCc
Confidence 99999976544333677 89999999999999954 557899999999999999999999999999999984445678
Q ss_pred CCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccccc-CCCC
Q 014631 170 VDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVF-GSTV 244 (421)
Q Consensus 170 ~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~ 244 (421)
+|++++++.++ ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..+
T Consensus 180 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 259 (420)
T 4f4e_A 180 VNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAAANL 259 (420)
T ss_dssp ECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred cCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHhcCC
Confidence 99999999887 5678889999999999999999999999999999999999999999988753 22233332 2356
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH----HHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV----DSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF 314 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~ 314 (421)
++++++||||.|+++|+|+||+++..+. ++++ ..++... ..+.+++.+.+.++..++.... +.++
T Consensus 260 ~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 334 (420)
T 4f4e_A 260 NVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWVQEL 334 (420)
T ss_dssp CEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred CEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7899999999999999999999753221 2333 3333322 2345677888888888887532 4567
Q ss_pred HHHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 315 SKIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
++.+++++++++.+.+.|+++ +++. +..|.+|+|+|+.++ . +.+..+++++||.+.|+.
T Consensus 335 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~------- 396 (420)
T 4f4e_A 335 GEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG------- 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS-------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC-------
Confidence 888999999999999999986 3677 446888999997663 2 345667788899999852
Q ss_pred EEEEec-CCHHHHHHHHHHHHHHH
Q 014631 392 LRITFA-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 392 iRi~~~-~~~e~l~~~~~~l~~~~ 414 (421)
|+|++ .+++++++++++|++++
T Consensus 397 -Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 -RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp -EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred -eEEEecCCHHHHHHHHHHHHHHh
Confidence 99998 48888999999999876
No 42
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=2.3e-45 Score=348.74 Aligned_cols=359 Identities=28% Similarity=0.454 Sum_probs=289.3
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
+..++++.++.+....+ .+.+|||+.|.+. ++.++.+.+++.+++.. ...|++..+..++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~-------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~ 73 (381)
T 1v2d_A 7 TEAAKESIFPRMSGLAQ-------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALAEE 73 (381)
T ss_dssp GGGC---CHHHHHHHHH-------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHHHH
T ss_pred hhhcCccHHHHHHHHHh-------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHHHh
Confidence 44455555666555443 2468999999865 46789999999998876 35788878899999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc--CCCCccCCHHHHH
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL--PEKGWEVDLDGLE 176 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~d~e~l~ 176 (421)
+ ++++++|++|+|+++++..+++++.++||+|++++|+|+++...++..|.+++.++.+ ++ ++.+|+++++
T Consensus 74 ~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~l~ 146 (381)
T 1v2d_A 74 F------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSALE 146 (381)
T ss_dssp H------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHHHH
T ss_pred c------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHHHH
Confidence 7 4677899999999999999999999999999999999999999999999999999875 22 3679999999
Q ss_pred hhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 177 ALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 177 ~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
+.+.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+ |....++..+ ..+.++++.|+||.|
T Consensus 147 ~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK~~ 224 (381)
T 1v2d_A 147 KALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGKRL 224 (381)
T ss_dssp TTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHHHT
T ss_pred HhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechhhc
Confidence 99988889999999999999999999999999999999999999999999877 4433334333 345679999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
+++|+|+||+++++ ++++.+..... ...+++++.+.++..+|+... ..++++.+++++++++++.+.|++
T Consensus 225 ~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 296 (381)
T 1v2d_A 225 EATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGLRA 296 (381)
T ss_dssp TCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88999999999853 24455544332 234678888888888887432 467888899999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC----CCeEEEEecCCHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----KNWLRITFAIEPSALEEGLGRI 410 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~iRi~~~~~~e~l~~~~~~l 410 (421)
. |+. +..|.+++|+|+.++.. + +..+++++||.+.||..|+. .+++|++++.+++++++++++|
T Consensus 297 ~-g~~-~~~~~~~~~~~~~~~~~---------~-~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~~l 364 (381)
T 1v2d_A 297 M-GLR-VYVPEGTYFLMAELPGW---------D-AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALERL 364 (381)
T ss_dssp T-TCC-EECCSBSSEEEEECTTC---------C-HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHHHH
T ss_pred C-CCE-ecCCCcceEEEEecChH---------h-HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHHHH
Confidence 5 887 44677788999988631 2 55667889999999988864 5799999999999999999999
Q ss_pred HHHHHHhhh
Q 014631 411 KAFCQRHAK 419 (421)
Q Consensus 411 ~~~~~~~~~ 419 (421)
.+++++.++
T Consensus 365 ~~~l~~~r~ 373 (381)
T 1v2d_A 365 GRVVNSPRE 373 (381)
T ss_dssp HHHC-----
T ss_pred HHHHhhccc
Confidence 999877654
No 43
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=1.9e-45 Score=351.19 Aligned_cols=366 Identities=22% Similarity=0.334 Sum_probs=296.4
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~ 97 (421)
..++++.++.+....+ ++++|||+.|.|.. ...+++.+.+++.+.+... ....|++..|..++|+++++
T Consensus 15 ~~~~~~~~~~~~~~~~-------~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~~~l~~~la~ 85 (397)
T 2zyj_A 15 GRIQASTIRELLKLTQ-------RPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGYAPLRAFVAE 85 (397)
T ss_dssp GGCCCCHHHHHHHHHT-------STTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCCHHHHHHHHH
T ss_pred cccCchHHHHHHhhcc-------CCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCCHHHHHHHHH
Confidence 3344555666655432 56899999998762 2346788999998888652 23578887889999999999
Q ss_pred HHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh
Q 014631 98 YLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~ 177 (421)
++ ++++++|++|+|+++++..+++++.++||+|++++|+|+++...++..|.+++.++.+++ ++|++++++
T Consensus 86 ~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~---~~d~~~l~~ 156 (397)
T 2zyj_A 86 WI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE---GPDLDALEE 156 (397)
T ss_dssp HH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---EECHHHHHH
T ss_pred Hh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---CCCHHHHHH
Confidence 99 356789999999999999999999999999999999999999999999999999987542 389999999
Q ss_pred hhcc-CceEE-EEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC---CCEEEEccc
Q 014631 178 LADE-NTVAM-VIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST---VPVITLGSM 252 (421)
Q Consensus 178 ~~~~-~~~~i-~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~---~~~i~~~s~ 252 (421)
.+++ +++++ ++++|+||||.+++.+++++|+++|++||+++|+||+|+.+.++|....++..++.+ +++++++|+
T Consensus 157 ~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~s~ 236 (397)
T 2zyj_A 157 VLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVIYLGSF 236 (397)
T ss_dssp HHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEEEEEES
T ss_pred HHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEEEEecc
Confidence 8875 67877 578999999999999999999999999999999999999998877654555555444 678999999
Q ss_pred ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
||+|+ +|+|+||++++ +++.+.+..... ...+++++.+.++.++|+.....++++.+++++++++.+.+.
T Consensus 237 sK~~~-~G~r~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 307 (397)
T 2zyj_A 237 SKVLS-PGLRVAFAVAH--------PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHA 307 (397)
T ss_dssp TTTTC-GGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccc-ccceeEEEecC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99998 99999999985 356676665443 234568899999988887531256788888999999999999
Q ss_pred hhc-CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----CCCeEEEEec-CCHHHHH
Q 014631 332 IKE-IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----MKNWLRITFA-IEPSALE 404 (421)
Q Consensus 332 l~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~iRi~~~-~~~e~l~ 404 (421)
|++ +| ++. +..|.+|+|+|++++.. .+..++...++ ++||.+.||..|+ .++++|++++ .++++++
T Consensus 308 L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~-~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~~i~ 380 (397)
T 2zyj_A 308 LDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRAL-EENVAFVPGGPFFANGGGENTLRLSYATLDREGIA 380 (397)
T ss_dssp HHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHH-HTTEEEEESGGGCTTSCCTTEEEEECSSSCHHHHH
T ss_pred HHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHH-HCCCEEechHHhcCCCCCCCeEEEEcCCCCHHHHH
Confidence 987 57 587 44678899999998642 14667777765 4599999998875 3579999998 4799999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
+++++|.++++++.+
T Consensus 381 ~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 381 EGVRRLGRALKGLLA 395 (397)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 44
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=1.8e-45 Score=353.77 Aligned_cols=376 Identities=15% Similarity=0.138 Sum_probs=295.1
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADY 98 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~ 98 (421)
.+..++.+..+...+++...+.++.++|+|+.|.|. ..+.+++++.+.+++.+..... ...|++..|.+++|++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~lr~~ia~~ 92 (418)
T 3rq1_A 14 GKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDSE-HVGYAPIAGIPDFLCAAEKE 92 (418)
T ss_dssp TCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHHH-HHSCCCTTCCHHHHHHHHHH
T ss_pred CCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhcccc-cCCCCCCCChHHHHHHHHHH
Confidence 344567788888777776655557799999999872 2234678899988887654322 24798889999999999999
Q ss_pred HhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 99 LNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 99 l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+....+.. .+++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.+++.+++ +++|++++++.
T Consensus 93 ~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~~d~~~l~~~ 170 (418)
T 3rq1_A 93 CFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NNFNHEAFQNR 170 (418)
T ss_dssp HHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SSBCHHHHHHH
T ss_pred HhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CCcCHHHHHHH
Confidence 97655421 13399999999999999999999999999999999999999999999999999986444 67999999998
Q ss_pred hcc----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHH------hcCcEEEEcccccccccCCCCccccc-ccC-CCC
Q 014631 179 ADE----NTV-AMVIVNP-GNPCGNVFTYQQLQKIAEKAR------KLGIMVISDEVYDHLTFGSTPYVRMG-VFG-STV 244 (421)
Q Consensus 179 ~~~----~~~-~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~-~~~-~~~ 244 (421)
+++ +++ ++++++| +||||.+++.+++++|+++|+ +||+++|+||+|.++.+.+....++. ... ..+
T Consensus 171 l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~ 250 (418)
T 3rq1_A 171 VNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSHLPK 250 (418)
T ss_dssp HHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTTCCT
T ss_pred HHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHhcCC
Confidence 864 555 6788899 999999999999999999999 89999999999999886654322222 222 123
Q ss_pred C--EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-----cccCCchHHHHHHHHHhhccc-----hh
Q 014631 245 P--VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-----ISSGPATFVQGAVPQIFKNTK-----ED 312 (421)
Q Consensus 245 ~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~-----~~ 312 (421)
+ +++++||||.|+++|+|+||+++..+. +++++.+..... .+++++.+++.++..+++... ..
T Consensus 251 ~~~~i~~~S~sK~~~~~G~r~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 325 (418)
T 3rq1_A 251 EILTCVCYSLSKGFTMYGQRVGAMIGISDD-----EEIADEFFEVNKSTSRATWSNICRPAMRTMANIVADPAKFKEYEA 325 (418)
T ss_dssp TEEEEEEEESTTTTTCCSSCCEEEEEEESS-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CceEEEEEeCCCCCcCcCCcceEEEEEeCC-----HHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCCHHHHHHHHH
Confidence 4 588899999999999999999982100 356666655432 124678889999888887531 12
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i 392 (421)
...+.+++++++++.+.+.|+++ |+. +..|.+++|+|+.++ +..++.. ++.++||.+.||. +++
T Consensus 326 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~-~l~~~gi~v~~g~-----~~i 389 (418)
T 3rq1_A 326 ERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICE-ELKKEHIYVIALA-----NGI 389 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHH-HHHHTTEECEECS-----SEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHH-HHHhCCEEEecCC-----CCe
Confidence 33456678899999999999987 888 457888999998774 3566765 4578899999983 689
Q ss_pred EEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 393 RITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 393 Ri~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
|+|++ .+++++++++++|+++++++.+
T Consensus 390 Ris~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (418)
T 3rq1_A 390 RIAACGIPKCQMTGLAEKIYNAMKSLGK 417 (418)
T ss_dssp EEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred EEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 99998 6999999999999999988753
No 45
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=8.2e-46 Score=353.78 Aligned_cols=366 Identities=16% Similarity=0.149 Sum_probs=290.9
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCC---CCCCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHG---DPSAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARR 93 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~ 93 (421)
+++..+++.++.+...++++. .+++|||+.| +|. ...+.++.+.+++.+ .+.......|++..|..++|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~ 77 (397)
T 3fsl_A 4 KVDAYAGDPILTLMERFKEDP----RSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRH 77 (397)
T ss_dssp TCCCCCCCHHHHHHHHHHTCC----CSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHH
T ss_pred cCCCCCCCchhhHHHHHhcCC----CCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHH
Confidence 355566788889888887644 5789999999 443 224556999999999 887655568998899999999
Q ss_pred HHHHHHhhhCCCCCCCC--cEEEcCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCcc
Q 014631 94 AIADYLNSELPCKLSPD--DVYLTAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWE 169 (421)
Q Consensus 94 ~ia~~l~~~~~~~~~~~--~i~~~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~ 169 (421)
++++++....+..++++ +|++|+|++++++.+++ .++++||+|++++|+|.++...++..|.+++.+++.++++++
T Consensus 78 ~la~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (397)
T 3fsl_A 78 AIAPLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNG 157 (397)
T ss_dssp HHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTE
T ss_pred HHHHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCc
Confidence 99999976544334678 89999999999999954 456899999999999999999999999999999885455678
Q ss_pred CCHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-Cccccccc-CCCC
Q 014631 170 VDLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVF-GSTV 244 (421)
Q Consensus 170 ~d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~ 244 (421)
+|++++++.++ ++++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..+
T Consensus 158 ~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 237 (397)
T 3fsl_A 158 VRFNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGL 237 (397)
T ss_dssp ECHHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTC
T ss_pred CcHHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCC
Confidence 99999999887 5678888999999999999999999999999999999999999999987632 22233333 3456
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH----Hhhhc-ccccCCchHHHHHHHHHhhccc-----hhHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS----IKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFF 314 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~ 314 (421)
++++++||||.|+++|+|+||++++... +++++. ++... ..+.+++.+++.++..++.... ..++
T Consensus 238 ~~i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 312 (397)
T 3fsl_A 238 PALVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEV 312 (397)
T ss_dssp CEEEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHH
T ss_pred CEEEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 7899999999999999999999864222 233332 22221 2345667888888888886421 4667
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 315 SKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
++.+++++++++.+.+.|++++ ++. +..|.+++|+|+.++ . +.+..+++++||.+.||.
T Consensus 313 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~------- 374 (397)
T 3fsl_A 313 EEMRTRILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG------- 374 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC-------
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC-------
Confidence 8888999999999999999864 676 446788999997663 2 345667788999999874
Q ss_pred EEEEec-CCHHHHHHHHHHHHHH
Q 014631 392 LRITFA-IEPSALEEGLGRIKAF 413 (421)
Q Consensus 392 iRi~~~-~~~e~l~~~~~~l~~~ 413 (421)
|++++ .+++++++++++|+++
T Consensus 375 -Ris~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 375 -RMCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp -EEEGGGCCTTTHHHHHHHHHHH
T ss_pred -eEEEEecCHhhHHHHHHHHHhh
Confidence 99998 4888899999999876
No 46
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=3.1e-45 Score=351.63 Aligned_cols=372 Identities=16% Similarity=0.190 Sum_probs=292.2
Q ss_pred hhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH
Q 014631 21 ATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l 99 (421)
...++.++++...+++...+.++.++|+|++|+|. ..+.+++++.+.+++.+.... ....|++..|.+++|+++++++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~la~~~ 92 (413)
T 3t18_A 14 NNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKIVIDTL 92 (413)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHHHHHHH
T ss_pred CCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHHHHHHH
Confidence 34467788888777766555557799999999973 223467888999888764332 2347888889999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
....+. .++++|++|+|+++++..++++++++||+|++++|+|.++...++..|.+++.++..+++ +++|++++++.+
T Consensus 93 ~~~~~~-~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l 170 (413)
T 3t18_A 93 FGPYKP-EGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDVYKEAI 170 (413)
T ss_dssp HGGGCC-SSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHHHHHHH
T ss_pred hcccCc-cccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHHHHHHH
Confidence 765442 244599999999999999999999999999999999999999999999999999975443 789999999988
Q ss_pred cc----Cce-EEEEeCC-CCCcccccCHHHHHHHHHHHH------hcCcEEEEcccccccccCCCCccccc-ccC-CCCC
Q 014631 180 DE----NTV-AMVIVNP-GNPCGNVFTYQQLQKIAEKAR------KLGIMVISDEVYDHLTFGSTPYVRMG-VFG-STVP 245 (421)
Q Consensus 180 ~~----~~~-~i~~~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~-~~~-~~~~ 245 (421)
.+ +++ ++++++| |||||.+++.+++++|+++|+ +||+++|+||+|.++.+.+....++. ... ..++
T Consensus 171 ~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 250 (413)
T 3t18_A 171 DEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFSNLPRN 250 (413)
T ss_dssp HHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGTTCCTT
T ss_pred HHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHhhcCCC
Confidence 65 666 6788899 999999999999999999999 89999999999999988776443332 222 1234
Q ss_pred --EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-----cccCCchHHHHHHHHHhhccc----hhHH
Q 014631 246 --VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-----ISSGPATFVQGAVPQIFKNTK----EDFF 314 (421)
Q Consensus 246 --~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~----~~~~ 314 (421)
+++++||||.|+++|+|+||+++.... +++++.+..... .+.+++.+++.++..+++... ....
T Consensus 251 ~~~i~~~S~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 325 (413)
T 3t18_A 251 LFVVVAFSMSKSHTAYGLRSGAAVGISSS-----KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKIYEQEL 325 (413)
T ss_dssp EEEEEEEEHHHHTTCGGGCCEEEEEEESC-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred eeEEEEEecCccCCCcCcCcEEEEEecCC-----HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHHHHHHH
Confidence 488899999999999999999983110 356666655432 124578888999888886521 2345
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE
Q 014631 315 SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI 394 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi 394 (421)
++.+++++++++.+.+.|+++ |+. +..|.+++|+|+.+. +..++... +.++||.+.|| ++++|+
T Consensus 326 ~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gv~v~~g-----~~~iRi 389 (413)
T 3t18_A 326 VDLRNMLKSRADVFVTAAKEN-KLT-MIPYFGGFFTFIPTD--------KAFDIVKD-LEKENIFTIPS-----AKGIRV 389 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCC-CBCCCSSSCEEEECS--------CHHHHHHH-HHHTTEECEEC-----SSEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHc-CCC-ccCCCceEEEEeCCC--------CHHHHHHH-HHhCCEEEecC-----CCceEE
Confidence 567788999999999999988 888 457888999998763 46677765 57889999997 478999
Q ss_pred Eec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 395 TFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 395 ~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+++ .+++++ +++|.++++++.+
T Consensus 390 s~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 390 AICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp CTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred EEeeCCHHHH---HHHHHHHHHHHhc
Confidence 998 566776 8889988887754
No 47
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=1.3e-45 Score=355.99 Aligned_cols=352 Identities=16% Similarity=0.232 Sum_probs=285.5
Q ss_pred CCCeeeccCCCC-CCCCCCCCcHHH--HHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCc---EEEcC
Q 014631 43 PRPIIPLGHGDP-SAFPCFRTTPVA--ADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDD---VYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~-~~~~~~~~~~~v--~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~---i~~~~ 116 (421)
.+++|||+.|.| . ++.++.+ .+++.+.+.......|++..|..++|+++++++.+.+ .++++++ |++|+
T Consensus 46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 357899999997 4 2334444 6666555543234689888899999999999998765 6677888 99999
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh-cCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARH-TRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPG 192 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~ 192 (421)
|++++++.++++++++||+|++++|+|+++...++. .|.+++.++.++++ +++|++++++.+++ +++++++++|+
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 999999999999999999999999999999999999 99999999886543 67999999998876 78889999999
Q ss_pred CCcccccCHHHHHHHHHHHHh-----cCcEEEEcccccccccCCCCccccc-ccCC-CCC---EEEEcccccccCCCCce
Q 014631 193 NPCGNVFTYQQLQKIAEKARK-----LGIMVISDEVYDHLTFGSTPYVRMG-VFGS-TVP---VITLGSMSKRWIVPGWR 262 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r 262 (421)
||||.+++.+++++|+++|++ ||+++|+||+|+++.+++....++. .++. .++ +++++|+||.|+++|+|
T Consensus 200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 279 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR 279 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence 999999999999999999999 9999999999999988765444443 3432 456 89999999999889999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhcc-----cccCCchHHHHHHHHHhh-ccc-hhHHHHHHHHHHHHHHHHHHHhh--
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYLN-----ISSGPATFVQGAVPQIFK-NTK-EDFFSKIVDILRDTADICYDRIK-- 333 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~l~-~~~-~~~~~~~~~~~~~~~~~~~~~l~-- 333 (421)
+||+++..+. +++.+.+..... .+.+++++.+.++.++|+ ... ...+++.+++++++++.+.+.|+
T Consensus 280 iG~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 354 (430)
T 2x5f_A 280 VGFMTFGTSD-----QTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYAD 354 (430)
T ss_dssp CEEEEEBCCC-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCG
T ss_pred eEEEEEecCC-----HHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999981100 356666655432 345788999999999997 531 22334488899999999999998
Q ss_pred --cCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHH
Q 014631 334 --EIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRI 410 (421)
Q Consensus 334 --~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l 410 (421)
+. ++. +..|.+++|+|+.++ . .+..++...+++++||.+.|| ..+++|++++ .+++++++++++|
T Consensus 355 ~~~~-g~~-~~~~~~g~~~~~~~~-~-----~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~~~l 422 (430)
T 2x5f_A 355 QYHS-HWQ-AYDFNSGYFMAIKVH-D-----VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVFDSI 422 (430)
T ss_dssp GGTT-TEE-ECCCCBSSEEEEEES-S-----SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHHHHH
T ss_pred CCCC-Cce-eeCCCceEEEEeCCC-C-----CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHHHHH
Confidence 55 777 447788899999987 2 146778877766589999998 3578999999 8899999999999
Q ss_pred HHHHHHh
Q 014631 411 KAFCQRH 417 (421)
Q Consensus 411 ~~~~~~~ 417 (421)
+++++++
T Consensus 423 ~~~l~~~ 429 (430)
T 2x5f_A 423 AKAIDDL 429 (430)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9998765
No 48
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=2.4e-45 Score=351.04 Aligned_cols=373 Identities=16% Similarity=0.133 Sum_probs=289.6
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
+++..++++++.....++... .+.+|+|+.|.| +.....+..+.+.+++.+.........|.+..|.+++|++++
T Consensus 6 ~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 81 (401)
T 7aat_A 6 HVEMGPPDPILGVTEAFKRDT----NSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRASA 81 (401)
T ss_dssp TCCCCCCCHHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCCCChhHHHHHHHhhCC----CCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHHHH
Confidence 455666788888888777543 567899999997 433334456788998888776434568988899999999999
Q ss_pred HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc---CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631 97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA---RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD 171 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~---~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 171 (421)
++++..+|..+++++|++ |+|++++++.++..+. ++||+|++++|+|.++...++..|.+++.++++.++++++|
T Consensus 82 ~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 161 (401)
T 7aat_A 82 ELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCSLD 161 (401)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTEEC
T ss_pred HHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCccC
Confidence 999887776677999987 9999999999887664 89999999999999999999999999999998655567899
Q ss_pred HHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Cccccccc-CCCCC
Q 014631 172 LDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVF-GSTVP 245 (421)
Q Consensus 172 ~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~~ 245 (421)
++.+++.+. ++++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..++
T Consensus 162 ~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~ 241 (401)
T 7aat_A 162 FTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQGID 241 (401)
T ss_dssp HHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCC
T ss_pred HHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcCCc
Confidence 997766553 5678889999999999999999999999999999999999999999887643 12222222 34567
Q ss_pred EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-----hhHHHHHHH
Q 014631 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-----EDFFSKIVD 319 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~ 319 (421)
+++++||||.|+++|+|+||++++...... ...+...+..... .+.+++...+.++..+++... ..++++.++
T Consensus 242 ~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 320 (401)
T 7aat_A 242 VVLSQSYAKNMGLYGERAGAFTVICRDAEE-AKRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGMAD 320 (401)
T ss_dssp CEEEEECTTTSCCGGGCEEEEEEECSSHHH-HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCCcccccccCceEEEEEEeCCHHH-HHHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 899999999999999999999874322100 0114444444332 234666777777777776421 345777888
Q ss_pred HHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe
Q 014631 320 ILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF 396 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~ 396 (421)
+++++++++.+.|+++ +++. +..|.+++|.|+.++ .+++..+++++||.+.|+ +|+|+
T Consensus 321 ~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ris~ 381 (401)
T 7aat_A 321 RIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRISV 381 (401)
T ss_dssp HHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEEEG
T ss_pred HHHHHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeEEe
Confidence 9999999999999876 2365 346888999997553 345577778899999865 59999
Q ss_pred c-CCHHHHHHHHHHHHHHH
Q 014631 397 A-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 397 ~-~~~e~l~~~~~~l~~~~ 414 (421)
+ .+++++++++++|++++
T Consensus 382 ~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 382 AGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp GGCCTTTHHHHHHHHHHHH
T ss_pred ccCChhhHHHHHHHHHHHh
Confidence 8 66677999999999875
No 49
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2.6e-44 Score=339.25 Aligned_cols=333 Identities=20% Similarity=0.300 Sum_probs=281.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
+..++|+|+.|.+. +++++.+.+++.+.+.. ...| +..+..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y-~~~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNENP----LGTSKKVAAIQANSSVE--TEIY-PDGWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSCT----TCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCCC----CCCCHHHHHHHHHHHHH--hhcC-CCcchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 35789999999855 57889999999886643 4466 4567899999999999 4678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
++.+++++.++||+|+++.|+|.++...++..|.+++.++.++ ++.+|++++++.++++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999864 46799999999998899999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++.+|++.|++ |+++|+|++|+++.+ +.....+...+..++++++.|+||.++++|+|+||++++ +++.
T Consensus 175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 244 (363)
T 3ffh_A 175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIAD--------KEII 244 (363)
T ss_dssp HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEEC--------HHHH
T ss_pred HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecC--------HHHH
Confidence 999999998888 999999999999887 544334444455678999999999999999999999995 4677
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+..... ..+++.+.+.++.++++. ..++++.+++++++++++.+.|++++++. + .+..++|+|+.++.
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~----- 314 (363)
T 3ffh_A 245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI----- 314 (363)
T ss_dssp HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence 77777655 357889999999999974 47788999999999999999999866888 4 34556788988863
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+..++...+ .++||.+.+|..|+.++++|++++ +++++++++++|+++
T Consensus 315 --~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 315 --EAGTIFSYL-EKNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp --CHHHHHHHH-HHTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHH-HHCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 356677666 567999999999988899999998 889999999999876
No 50
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=1.2e-44 Score=349.72 Aligned_cols=362 Identities=21% Similarity=0.348 Sum_probs=291.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC-----------CCCCCCCCCCHHHHHHHHHHHhhhCC--CCCCC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE-----------FDCYSPSVGILPARRAIADYLNSELP--CKLSP 109 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~y~~~~g~~~l~~~ia~~l~~~~~--~~~~~ 109 (421)
...+|+|+.+.- ...++.+.+++.+...... ...|++..|.+++|+++++++++.++ ..+++
T Consensus 37 p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~ 111 (435)
T 3piu_A 37 TNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP 111 (435)
T ss_dssp TTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred CCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence 345788887652 2346777777776544221 13699999999999999999986544 45678
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-hcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-HTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
++|++|+|+++++..++.+++++||.|+++.|+|.++...+. ..|.+++.+++++++++.+|++++++.+.+ +
T Consensus 112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 191 (435)
T 3piu_A 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR 191 (435)
T ss_dssp GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999988887 789999999987766788999999998865 7
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC----------CCCEEEEccc
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS----------TVPVITLGSM 252 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~ 252 (421)
+++|++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.+++..+.++..+.. .+++++++||
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~ 271 (435)
T 3piu_A 192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271 (435)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence 889999999999999999999999999999999999999999998888766555443322 4678999999
Q ss_pred ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHH
Q 014631 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~ 330 (421)
||.|+++|+|+||+++++ +++.+.+...... .+.+++.+.++.+++.... +.++++.+++++++++++.+
T Consensus 272 sK~~g~~G~r~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (435)
T 3piu_A 272 SKDLGLPGFRVGAIYSND-------DMVVAAATKMSSF-GLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVS 343 (435)
T ss_dssp SSSSCCGGGCEEEEEESC-------HHHHHHHHHHGGG-SCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCceeEEEEEeCC-------HHHHHHHHHHhhc-CCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999853 3456666554433 4677888888888887532 34667788899999999999
Q ss_pred HhhcCCCccccCCCCceeEEEEecCcccccCC-CChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecC-CHHHHHHH
Q 014631 331 RIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI-SDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAI-EPSALEEG 406 (421)
Q Consensus 331 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~-~~e~l~~~ 406 (421)
.|+++ |+. +..+.+|+|+|+.++....... .+..+++..+++++||.+.||..|+. ++++|++++. ++++++++
T Consensus 344 ~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~ 421 (435)
T 3piu_A 344 GLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLA 421 (435)
T ss_dssp HHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHH
T ss_pred HHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHH
Confidence 99987 887 4477888999999875311000 01346777777777999999988754 6799999985 99999999
Q ss_pred HHHHHHHHHHhhh
Q 014631 407 LGRIKAFCQRHAK 419 (421)
Q Consensus 407 ~~~l~~~~~~~~~ 419 (421)
+++|.++++++++
T Consensus 422 l~~l~~~l~~~~~ 434 (435)
T 3piu_A 422 MQRLKAFVGEYYN 434 (435)
T ss_dssp HHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHhC
Confidence 9999999987753
No 51
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=9.5e-45 Score=346.64 Aligned_cols=368 Identities=17% Similarity=0.230 Sum_probs=277.4
Q ss_pred HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC----CCCCCCCCCCCHHHHHHHHHHHhhh
Q 014631 27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA----EFDCYSPSVGILPARRAIADYLNSE 102 (421)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~y~~~~g~~~l~~~ia~~l~~~ 102 (421)
+..+..+.+....+..+.++|+|+.|.+. ++.++.+.+++.+.++.. ....|++..|..++|+++++++.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~lr~~la~~l~-- 89 (400)
T 3asa_A 16 FADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPALRQKLSEDFY-- 89 (400)
T ss_dssp HHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHHHHHHHHHTTS--
T ss_pred HHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHH--
Confidence 33444444433323347889999999865 467889999999887642 24578888899999999999974
Q ss_pred CCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCce-eEeeeccCCCCccCCHHHHHhhhcc
Q 014631 103 LPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLE-IRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 103 ~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
+|. +++++|++|+|+++++..++.. +++||+|++++|+|+++...+...|.+ ++.++.++++++..++++ . +
T Consensus 90 ~g~-~~~~~v~~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~---~--~ 162 (400)
T 3asa_A 90 RGF-VDAKEIFISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFFPEFPE---D--T 162 (400)
T ss_dssp TTS-SCGGGEEEESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTCCCCCT---T--C
T ss_pred cCC-CCHHHEEEccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcccChhh---c--c
Confidence 343 6789999999999999997654 479999999999999999999999998 888987654444444432 1 5
Q ss_pred CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCC
Q 014631 182 NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G 260 (421)
+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..++. .+++++++||||.|+++|
T Consensus 163 ~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G 242 (400)
T 3asa_A 163 HIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIEINSFSKPLGFAG 242 (400)
T ss_dssp CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECCGGGTTTT
T ss_pred CccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEEEecchhhcCCcc
Confidence 6889999999999999999999999999999999999999999988776643344545543 356899999999998999
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhh-h-cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKG-Y-LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
+|+||+++++......... ++.+.. . ...+.+++.+.|.++.++|+.. ++++.+++++++++.+.+.|+++ ++
T Consensus 243 lriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~~l~~~L~~~-g~ 317 (400)
T 3asa_A 243 IRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSDLLRKALLAT-GF 317 (400)
T ss_dssp CCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred hheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHHHHHHHHHHC-CC
Confidence 9999999864220000000 122211 1 1123468889999988888752 56778889999999999999987 77
Q ss_pred cccCCCCceeEEEEe-cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVK-LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
. +..|.+++|+|+. ++.. .+..+++..+++++||.+.||..|+. ++++|+++..+++++++++++|+++++
T Consensus 318 ~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~ 391 (400)
T 3asa_A 318 E-VFGGEHAPYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDILAACERLQMAPA 391 (400)
T ss_dssp E-EEECSSSSEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHHHHHHHHHHC---
T ss_pred e-eeCCCCceEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHHHHHHHHHHHHHH
Confidence 7 4466778999998 7532 13446777777778999999988863 578999977899999999999999987
Q ss_pred Hhh
Q 014631 416 RHA 418 (421)
Q Consensus 416 ~~~ 418 (421)
++.
T Consensus 392 ~~~ 394 (400)
T 3asa_A 392 LQS 394 (400)
T ss_dssp ---
T ss_pred hhh
Confidence 654
No 52
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=4.2e-44 Score=345.27 Aligned_cols=359 Identities=18% Similarity=0.347 Sum_probs=284.7
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCC--CCCCc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----------AEFDCYSPSVGILPARRAIADYLNSELPCK--LSPDD 111 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~--~~~~~ 111 (421)
..+|+|+.+... ..++.+.+++.+.... .....|++..|..++|+++++++++.+|.. +++++
T Consensus 36 ~~~i~l~~~~~~-----~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 36 NGVIQMGLAENQ-----LCLDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp TSBEECSSCCCC-----SSHHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred Cceeeeccccch-----hhHHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 478999877522 2345777777753210 013478888889999999999999888755 77899
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH-hhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA-RHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV 184 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~-~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~ 184 (421)
|++|+|+++++..++++++++||+|+++.|+|+++...+ ...|.+++.++.+.+++|.+|++++++.+++ +++
T Consensus 111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 190 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK 190 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence 999999999999999999999999999999999987644 4689999999886556678999999988753 678
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--------CCCEEEEccccccc
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--------TVPVITLGSMSKRW 256 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~ 256 (421)
++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++..+.++..+.. .++++++.|+||.|
T Consensus 191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~ 270 (428)
T 1iay_A 191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270 (428)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence 8999999999999999999999999999999999999999998876654444433322 36789999999999
Q ss_pred CCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 257 IVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 257 ~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
+++|+|+||+++++ +++++.+...... .+.+.++|.++..+++... +.++++.+++++++++++.+.|++
T Consensus 271 g~~Glr~G~~~~~~-------~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (428)
T 1iay_A 271 GLPGFRVGIIYSFN-------DDVVNCARKMSSF-GLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV 342 (428)
T ss_dssp SCGGGCEEEEEESC-------HHHHHHHHHHHTT-SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCC-------HHHHHHHHHHHhc-ccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999853 3466666654432 4678899999988887522 246788889999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccC-CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-CCHHHHHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEG-ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-IEPSALEEGLGRI 410 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-~~~e~l~~~~~~l 410 (421)
+ ++. +..+.+|+|+|++++...... .....++...+++++||.+.+|..|+. ++++|++++ .+++++++++++|
T Consensus 343 ~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l 420 (428)
T 1iay_A 343 V-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI 420 (428)
T ss_dssp T-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHH
T ss_pred c-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence 8 887 446668899999986421000 001345666666666999999988764 578999999 8999999999999
Q ss_pred HHHHHHh
Q 014631 411 KAFCQRH 417 (421)
Q Consensus 411 ~~~~~~~ 417 (421)
++++++.
T Consensus 421 ~~~l~~~ 427 (428)
T 1iay_A 421 RRFVGVE 427 (428)
T ss_dssp HHHHHTT
T ss_pred HHHHhcc
Confidence 9998653
No 53
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=4.5e-44 Score=336.40 Aligned_cols=336 Identities=18% Similarity=0.281 Sum_probs=285.3
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..+..+|+|+.|.+. +++++.+.+++.+.+.. ...|+ ..+..++|+++++++ ++++++|++|+|+++
T Consensus 13 ~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~l~~~la~~~------~~~~~~i~~~~g~~~ 79 (354)
T 3ly1_A 13 PSTDNPIRINFNENP----LGMSPKAQAAARDAVVK--ANRYA-KNEILMLGNKLAAHH------QVEAPSILLTAGSSE 79 (354)
T ss_dssp CCSSSCEECSSCCCS----SCCCHHHHHHHHHTGGG--TTSCC-HHHHHHHHHHHHHHT------TSCGGGEEEESHHHH
T ss_pred CCCCceEEccCCCCC----CCCCHHHHHHHHHHHhh--CcCCC-CCchHHHHHHHHHHh------CCChHHEEEeCChHH
Confidence 457899999999855 57889999999998875 45674 457789999999998 467889999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeCCCCCcccc
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~p~nptG~~ 198 (421)
+++.+++++.++||+|+++.|+|+++...++..|.+++.++.++ ++.+|++++++.++ ++++++++++|+||||.+
T Consensus 80 a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~ 157 (354)
T 3ly1_A 80 GIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGTI 157 (354)
T ss_dssp HHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCCC
T ss_pred HHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCCC
Confidence 99999999999999999999999999999999999999998753 46799999999997 789999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC-CCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST-VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
++.+++++|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.|+++|+|+||++++
T Consensus 158 ~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~-------- 228 (354)
T 3ly1_A 158 TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAH-------- 228 (354)
T ss_dssp CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECC--------
T ss_pred cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecC--------
Confidence 9999999999999 8999999999999988776543343333444 67899999999998899999999985
Q ss_pred HHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcc
Q 014631 278 LRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLS 357 (421)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 357 (421)
+++.+.+...... .+++++.+.++.++++. ..++++.+++++++++.+.+.|+++ ++. + .+..+.|+|+.++.
T Consensus 229 ~~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~- 301 (354)
T 3ly1_A 229 PTVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV- 301 (354)
T ss_dssp HHHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS-
T ss_pred HHHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC-
Confidence 4677888777654 58889999999999874 3778889999999999999999987 777 4 35567788988863
Q ss_pred cccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 358 LLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 358 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
+..++...| .++||.+. |..++.++++|++++ +++++++++++|++++++
T Consensus 302 ------~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 ------PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp ------CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred ------CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 356666665 56799998 877777889999988 688999999999998865
No 54
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=7e-45 Score=349.04 Aligned_cols=373 Identities=15% Similarity=0.172 Sum_probs=293.4
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhc-CCCCCCCCCCCCHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRS-AEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~y~~~~g~~~l~~~ia 96 (421)
++.++++.++.+...+++. .+.++|||+.|.| ......++++.+.+++.+.+.. ...+.|++..|..++|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~la 84 (412)
T 1ajs_A 9 VPQAQPVLVFKLIADFRED----PDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCAS 84 (412)
T ss_dssp CCCCCCCHHHHHHHHHHTC----CCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred CcccCCchHHHHHHHHhhc----CCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHHH
Confidence 4456678899988877743 3678999999986 3222345678999999988733 23467988899999999999
Q ss_pred HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHH--HhcCCC-----CeEEEcCCCCcchHHHHhhcCce-eEeeeccCCC
Q 014631 97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILT--VLARPG-----ANILLPKPGFPLYEANARHTRLE-IRHFDLLPEK 166 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~g-----d~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~ 166 (421)
+++...+|..+++++|++ |+|++++++++++ .++++| |+|+++.|+|+++...++..|.+ ++.++..+++
T Consensus 85 ~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 164 (412)
T 1ajs_A 85 RLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDTE 164 (412)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEETT
T ss_pred HHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecCC
Confidence 999655554457889999 9999999999965 345799 99999999999999999999999 9999875446
Q ss_pred CccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccC
Q 014631 167 GWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFG 241 (421)
Q Consensus 167 ~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~ 241 (421)
++.+|++++++.+.+ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.++| ....++..+.
T Consensus 165 ~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 244 (412)
T 1ajs_A 165 KRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYFV 244 (412)
T ss_dssp TTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHH
T ss_pred CCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHHh
Confidence 678999999998764 56777789999999999999999999999999999999999999988765 1222333332
Q ss_pred -CCCCEEEEcccccccCCCCceEEEEEee--CCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hh
Q 014631 242 -STVPVITLGSMSKRWIVPGWRLGWLVTS--DPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----ED 312 (421)
Q Consensus 242 -~~~~~i~~~s~sK~~~~~G~r~G~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~ 312 (421)
..++++++.|+||.|+++|+|+||+++. +++ .. ..+.+.+.... ..+.+++++.+.++.++|+... +.
T Consensus 245 ~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 321 (412)
T 1ajs_A 245 SEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWTG 321 (412)
T ss_dssp HTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHHH
T ss_pred ccCCcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHHH
Confidence 3457899999999999899999999982 211 00 12444444422 3344568899999999997532 34
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC
Q 014631 313 FFSKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK 389 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~ 389 (421)
++++.+++++++++++.+.|+++. ++. +..|.+++|.|+.++ .+++..+++++||.+.|+
T Consensus 322 ~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~------ 384 (412)
T 1ajs_A 322 NVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS------ 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC------
Confidence 778889999999999999999873 366 336788899987553 346667778899999874
Q ss_pred CeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 390 NWLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 390 ~~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|++++ .+++++++++++|+++++++
T Consensus 385 --~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 --GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp --SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred --cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 599999 58999999999999998764
No 55
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-43 Score=333.31 Aligned_cols=332 Identities=18% Similarity=0.294 Sum_probs=282.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKL-SPDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~~~~g~~~a 121 (421)
+..+|+|+.|.+. ++.++.+.+++.+.+.......|+. .+..++|++++++++ + ++++|++|+|++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~g------~~~~~~i~~~~g~t~a 97 (367)
T 3euc_A 29 SHGLVKLDAMENP----YRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVMQ------VPAGMEVLLGNGSDEI 97 (367)
T ss_dssp CTTCEECCSSCCC----CCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHHT------CCTTCEEEEEEHHHHH
T ss_pred CCCeeEccCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHhC------CCCcceEEEcCCHHHH
Confidence 5789999999854 5788999999999987544457865 578999999999983 4 67899999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~ 200 (421)
++.++++++++||+|++++|+|.++...++..|.+++.++.++ ++.+|++++++.+++ +++++++++|+||||.+++
T Consensus 98 ~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~ 175 (367)
T 3euc_A 98 ISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFD 175 (367)
T ss_dssp HHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCC
Confidence 9999999999999999999999999999999999999998764 567999999999987 8999999999999999999
Q ss_pred HHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 201 YQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 201 ~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
.+++++|+++|++| |+++|+||+|+.+...+ ... .++..++++++.|+||. +++|+|+||++++ +
T Consensus 176 ~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~~~--~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~--------~ 242 (367)
T 3euc_A 176 AADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--WMS--RLTDFGNLLVMRTVSKL-GLAGIRLGYVAGD--------P 242 (367)
T ss_dssp HHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--SGG--GGGTCTTEEEEEECCCT-TSCSCCEEEEEEC--------H
T ss_pred HHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--hHH--HHhhCCCEEEEecchhh-cccccCceeeeeC--------H
Confidence 99999999999999 99999999999876322 222 33445678999999999 9999999999985 4
Q ss_pred HHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc
Q 014631 279 RIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL 358 (421)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 358 (421)
++.+.+...... .+++.+.+.++..+++. ..++++.+++++++++++.+.|+++|++. + .|..++|+|+.++
T Consensus 243 ~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~--- 314 (367)
T 3euc_A 243 QWLEQLDKVRPP-YNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP--- 314 (367)
T ss_dssp HHHHHHGGGCCS-SCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS---
T ss_pred HHHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC---
Confidence 677777766543 46889999999999975 67788999999999999999999998988 5 4666788998886
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+..++...+ .++||.+.+|..|+. .+++|++++ +++++++++++|+++++
T Consensus 315 -----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 315 -----DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp -----CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred -----CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 255666654 778999999987753 689999998 88999999999998763
No 56
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=9.5e-44 Score=335.65 Aligned_cols=333 Identities=15% Similarity=0.220 Sum_probs=281.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
..++|+|+.|.+. +++++.+.+++.+.+.. ...|++..+ .++|+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~ 95 (365)
T 3get_A 29 VKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI 95 (365)
T ss_dssp CSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 4789999999855 57889999999998874 457877665 99999999998 46788999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
+.++.+++++||+|+++.|+|.++...++..|.+++.+++ .++++ +|++++++.++++++++++++|+||||.++|.+
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 173 (365)
T 3get_A 96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS 173 (365)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999987 34567 999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEccccccccc--CCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
++++|+++| ++|+++|+|++|+++.+ .+.... .+...+..+++++++|+||.|+++|+|+||++++ ++
T Consensus 174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~--------~~ 244 (365)
T 3get_A 174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIAN--------AN 244 (365)
T ss_dssp HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEEC--------HH
T ss_pred HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcC--------HH
Confidence 999999999 57999999999998774 333222 2222334467899999999999999999999984 46
Q ss_pred HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
+.+.+...... .+++.+.+.++.++++. ..++++.+++++++++++.+.|+++ ++. + .+..+.|+|+.++..
T Consensus 245 ~~~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~-- 316 (365)
T 3get_A 245 IISAFYKLRAP-FNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK-- 316 (365)
T ss_dssp HHHHHHHHSCT-TCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred HHHHHHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence 77777766544 46889999999999974 4778899999999999999999988 887 4 344566789888642
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
+..++...| .++||.+.+|..|+ ++++|++++ +++++++++++|++++
T Consensus 317 ----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 ----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 356677665 55799999999888 889999998 7899999999998875
No 57
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=1.3e-43 Score=335.85 Aligned_cols=326 Identities=23% Similarity=0.378 Sum_probs=277.2
Q ss_pred HHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH
Q 014631 69 AVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA 148 (421)
Q Consensus 69 a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~ 148 (421)
++.+.+... ...|++..|.+++|+++++++. ++++++|++|+|+++|+..++++++++||+|+++.|+|.++..
T Consensus 47 ~~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGT-KLNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTS-CCSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcC-CcCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 444555554 3589999999999999999873 3678899999999999999999999999999999999999999
Q ss_pred HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 149 NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.+...|.+++.+++++++++.+|++++++.++++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998766778899999999998899999999999999999999999999999999999999999999987
Q ss_pred cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhh
Q 014631 229 FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFK 307 (421)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~ 307 (421)
+. +...+.. ..+++++++||||.++++|+|+||++++ +++++.+...... ..+++++.+.++..+++
T Consensus 201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAAN--------HQVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECC--------HHHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeC--------HHHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 65 2222222 2346789999999998899999999984 4688888776543 45677888888888887
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC
Q 014631 308 NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
. .+.++++.+++++++++.+.+.|++++++. +..|.++++.|+.++.. .+..+++..+++++||.+.||..|+
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~ 341 (375)
T 3op7_A 269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE 341 (375)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence 4 456778888899999999999999888887 44788888888888643 2467788888788999999999998
Q ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 388 MKNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 388 ~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.++++|++++.+.+++++++++|.++++++.+
T Consensus 342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~ 373 (375)
T 3op7_A 342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFDK 373 (375)
T ss_dssp CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC-
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhh
Confidence 88999999998889999999999999987754
No 58
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=8.4e-44 Score=344.58 Aligned_cols=373 Identities=15% Similarity=0.146 Sum_probs=290.4
Q ss_pred HHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHH--hcCCCCCCCCCCCCHHHHHH
Q 014631 18 HITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAV--RSAEFDCYSPSVGILPARRA 94 (421)
Q Consensus 18 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~--~~~~~~~y~~~~g~~~l~~~ 94 (421)
+++..+++++.++...++++. .+.+|+|+.|.| +.....+..+.+.+++.+.. .......|.+..|.+++|++
T Consensus 27 ~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ 102 (448)
T 3meb_A 27 GFPASPPDAILNLTVLYNADT----NPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEA 102 (448)
T ss_dssp TCCCCCCCTTHHHHHHHHHCC----CTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHH
T ss_pred cCCCCCCChHHHHHHHHHhCC----CCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHH
Confidence 466667888999988887643 456899999998 43333456788888877665 22334689888999999999
Q ss_pred HHHHHhhhCCCC---CCCCcEEE--cCCHHHHHHHH--HHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeecc
Q 014631 95 IADYLNSELPCK---LSPDDVYL--TAGCKQAIQVI--LTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLL 163 (421)
Q Consensus 95 ia~~l~~~~~~~---~~~~~i~~--~~g~~~al~~~--~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~ 163 (421)
+++++. |.. +++++|++ |+|++++++++ +..++++||+|++++|+|.++...++ ..|.+++.++..
T Consensus 103 ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~ 179 (448)
T 3meb_A 103 AQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYL 179 (448)
T ss_dssp HHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCB
T ss_pred HHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEecc
Confidence 999983 222 12689999 99999999884 45567899999999999999999999 999999999984
Q ss_pred CCC-CccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Ccccc
Q 014631 164 PEK-GWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRM 237 (421)
Q Consensus 164 ~~~-~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~ 237 (421)
+.+ ++.+|+|++++.+++ +++++++++||||||.+++.+++++|+++|++||+++|+||+|+++.+++. ....+
T Consensus 180 ~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~ 259 (448)
T 3meb_A 180 RKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAV 259 (448)
T ss_dssp CTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHH
T ss_pred ccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhH
Confidence 444 678999999998863 567778899999999999999999999999999999999999999887651 11222
Q ss_pred ccc-CCCCCEEEEcccccccCCCCceEEEE--Ee--------eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHH
Q 014631 238 GVF-GSTVPVITLGSMSKRWIVPGWRLGWL--VT--------SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQI 305 (421)
Q Consensus 238 ~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 305 (421)
..+ +..++++++.||||.|+++|+|+||+ ++ +++. . .+++.+.+.... ..+.+++.+.+.++..+
T Consensus 260 ~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~ 336 (448)
T 3meb_A 260 RMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-L--SAAMVSGMTLQIRKTWSMSAIHGAYIVQVI 336 (448)
T ss_dssp HHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHH
T ss_pred HHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-H--HHHHHHHHHHHHhcccCCccHHHHHHHHHH
Confidence 222 23457899999999999999999998 55 3210 0 014555555543 34557888999999888
Q ss_pred hhccc-----hhHHHHHHHHHHHHHHHHHHHhhcC--CC------ccccCCCCceeEEEEecCcccccCCCChHHHHHHH
Q 014631 306 FKNTK-----EDFFSKIVDILRDTADICYDRIKEI--PC------ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQL 372 (421)
Q Consensus 306 l~~~~-----~~~~~~~~~~~~~~~~~~~~~l~~~--~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 372 (421)
|.... ...+++.+++++++++.+.+.|+++ ++ +. ...|.+++|.|+.++ .+++..+
T Consensus 337 l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~~~l 405 (448)
T 3meb_A 337 VHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------PEHVDYL 405 (448)
T ss_dssp HTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------HHHHHHH
T ss_pred hcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------HHHHHHH
Confidence 87522 1447788889999999999999876 55 55 336788999997663 3567778
Q ss_pred HhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631 373 AKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 373 l~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~ 418 (421)
++++||.+.||+. |+|++ .+++++++++++|.++++++.
T Consensus 406 l~~~gV~v~~G~g-------Ris~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 406 KEKWSIYLVKAGG-------RMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp HHHHCEEECSGGG-------EEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred HHhCCEEEeCCCc-------EEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 8889999999862 99998 488889999999999998653
No 59
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=2e-44 Score=345.88 Aligned_cols=372 Identities=15% Similarity=0.125 Sum_probs=288.4
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHH-HHhcCCCCCCCCCCCCHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVD-AVRSAEFDCYSPSVGILPARRAIA 96 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~~y~~~~g~~~l~~~ia 96 (421)
++.+++++++++...+++. .++++|||+.|.| ......++++.+.+++.+ .+.....+.|++..|.+++|++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia 83 (412)
T 1yaa_A 8 IELLPPDALFGIKQRYGQD----QRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA 83 (412)
T ss_dssp CCCCCCCTTHHHHHHHHTC----CCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred CcccCCCcHHHHHHHHhcC----CCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence 4555677788888877643 2678999999986 322334578999999999 876444567988899999999999
Q ss_pred HHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHH--HhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCH
Q 014631 97 DYLNSELPCKLSPDDVYL--TAGCKQAIQVILT--VLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDL 172 (421)
Q Consensus 97 ~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~--~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~ 172 (421)
+++...+|..+++++|++ |+|+++++++++. .++++||+|++++|+|+++...++..|.+++.++....+++++|+
T Consensus 84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 163 (412)
T 1yaa_A 84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDL 163 (412)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECH
T ss_pred HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCH
Confidence 999765665567889999 9999999999843 334699999999999999999999999999999872233578999
Q ss_pred HHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC--CCcccccccC-CCC--
Q 014631 173 DGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS--TPYVRMGVFG-STV-- 244 (421)
Q Consensus 173 e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~-~~~-- 244 (421)
+++++.++++ +.++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++ ....++..+. ..+
T Consensus 164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (412)
T 1yaa_A 164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV 243 (412)
T ss_dssp HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence 9999988653 3445559999999999999999999999999999999999999988764 1222222221 123
Q ss_pred -CEEEEcccccccCCCCceEEEEE--e----eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----h
Q 014631 245 -PVITLGSMSKRWIVPGWRLGWLV--T----SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----E 311 (421)
Q Consensus 245 -~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~ 311 (421)
++++++|+||.|+++|+|+||++ + .++. . ...+++.+.... ..+.+++.+.+.++.++|+... +
T Consensus 244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~--~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 320 (412)
T 1yaa_A 244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKT-I--KPAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHH-H--HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred cceEEEeccCCCCCCcCCcceEEEEEecCCCCCHH-H--HHHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHH
Confidence 68999999999988899999998 5 1110 0 012666666532 3345668899999998887632 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
.++++.+++++++++++.+.|++++ ++. +..|.+++++|+.++ .. .+..+++++||.+.+
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~-~~~~~l~~~gi~v~~------ 383 (412)
T 1yaa_A 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQ-MVKRLEETHAVYLVA------ 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HH-HHHHHHHHHCEECCT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HH-HHHHHHHhCCEEecc------
Confidence 5788889999999999999999863 376 446788889886553 33 346777788999986
Q ss_pred CCeEEEEec-CCHHHHHHHHHHHHHHHHH
Q 014631 389 KNWLRITFA-IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 389 ~~~iRi~~~-~~~e~l~~~~~~l~~~~~~ 416 (421)
++||+++ .+++++++++++|+++++.
T Consensus 384 --~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 384 --SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp --TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred --CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 4699998 5899999999999998865
No 60
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=9.8e-44 Score=337.47 Aligned_cols=375 Identities=15% Similarity=0.098 Sum_probs=279.0
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
.+++..++++|.++...++++. .+.|||++|... ....++..+.|++|.+..++....+.|.|..|++++|+++
T Consensus 22 ~~v~~~p~d~i~~l~~~~~~d~-----~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~ai 96 (420)
T 4h51_A 22 QKIQAQAPDVIFDLAKRAAAAK-----GPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEA 96 (420)
T ss_dssp HTCCCCCCCHHHHHHHHHHHCC-----SSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHH
T ss_pred hCCCCCCCChHHHHHHHHhcCC-----CCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHH
Confidence 4677778999999998888753 348999999532 2233566789999998888776666899999999999999
Q ss_pred HHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchHHHHhhcCcee-EeeeccCCCCc
Q 014631 96 ADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVL----ARPGANILLPKPGFPLYEANARHTRLEI-RHFDLLPEKGW 168 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~ 168 (421)
++++... ....+++ +-|.|+|.|+...+..+ .+|||+|++++|+|.+|...++..|.+. ..++....+.+
T Consensus 97 a~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~~~~~ 173 (420)
T 4h51_A 97 VKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYDPKTV 173 (420)
T ss_dssp HHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEEGGGT
T ss_pred HHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccccccc
Confidence 9998432 2233333 45788888887766554 4699999999999999999999999874 44454444566
Q ss_pred cCCHHHHHhhh---ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc--c-cccCC
Q 014631 169 EVDLDGLEALA---DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR--M-GVFGS 242 (421)
Q Consensus 169 ~~d~e~l~~~~---~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~--~-~~~~~ 242 (421)
.+|.+.+.+.+ .++++++++++||||||..++.+++++|+++|+++++++|+|++|.++.+++..... + ...+.
T Consensus 174 ~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~ 253 (420)
T 4h51_A 174 SLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARR 253 (420)
T ss_dssp EECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHT
T ss_pred CCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhh
Confidence 78988887765 356777888899999999999999999999999999999999999999876532211 1 11234
Q ss_pred CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHH
Q 014631 243 TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSK 316 (421)
Q Consensus 243 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 316 (421)
.++++++.||||.|+++|+|+||++++.+.... ...+...+.... ...++++...+.++...+.+.. +..++.
T Consensus 254 ~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~~~~~ 332 (420)
T 4h51_A 254 GIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEAELSA 332 (420)
T ss_dssp TCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred CceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 457899999999999999999999987543111 112333333332 3456788888988888887522 345667
Q ss_pred HHHHHHHHHHHHHHHhhcC--CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631 317 IVDILRDTADICYDRIKEI--PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLR 393 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~--~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR 393 (421)
.+++++++|+.+.+.|++. ++ |. ...+++|+|.|+.+. . ++++ +|+++||++.|+. |
T Consensus 333 m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g--------R 392 (420)
T 4h51_A 333 MAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG--------R 392 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC--------E
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC--------E
Confidence 7888999999999999875 22 43 225677999987653 2 3444 5688999998864 9
Q ss_pred EEec-CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 394 ITFA-IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 394 i~~~-~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
||++ .++++|+.++++|.+++++..++
T Consensus 393 is~Agl~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 393 ANMAGLTHETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp EEGGGCCHHHHHHHHHHHHHHHC-----
T ss_pred EEeccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 9998 79999999999999999887764
No 61
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.3e-43 Score=349.34 Aligned_cols=373 Identities=18% Similarity=0.265 Sum_probs=289.9
Q ss_pred HHHHHHHHhccccCC------CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhh
Q 014631 29 SALTIIKQNLKENDP------RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNS 101 (421)
Q Consensus 29 ~~~~~~~~~~~~~~~------~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~ 101 (421)
++..++...+..+.+ ..+++|+.|.|. ++ ++.+.+++.+.+.. ..|+ +..|.+++|+++++++..
T Consensus 82 g~~~~~~~~~~~~~~~g~~~~~~~i~l~~g~~~----~~-~~~~v~a~~~~~~~---~~y~~~~~g~~~lr~~ia~~l~~ 153 (533)
T 3f6t_A 82 GIRERLFAFLDPDKNDEDKFLIDAVNYCHTELG----LN-RDKVVAEWVNGAVA---NNYPVPDRCLVNTEKIINYFLQE 153 (533)
T ss_dssp THHHHHHHHCCTTTCHHHHHHHHHHHHHHHTTC----CC-HHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCCCcccccHhheeccCCCCC----cC-CcHHHHHHHHHHHh---CCCCCCcccHHHHHHHHHHHHHH
Confidence 344555555543322 247899999877 33 56666676666664 2455 778999999999999976
Q ss_pred h-CC-CCCC-CCcEEEcCCHHHHHHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccC--CCCccCC
Q 014631 102 E-LP-CKLS-PDDVYLTAGCKQAIQVILTV-----LARPGANILLPKPGFPLYEANARHTRLEIRHFDLLP--EKGWEVD 171 (421)
Q Consensus 102 ~-~~-~~~~-~~~i~~~~g~~~al~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~--~~~~~~d 171 (421)
. .+ .... +++|++|+|+++++..++.+ ++++||+|+++.|+|.++...+...|.+++.++++. ++++++|
T Consensus 154 ~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d 233 (533)
T 3f6t_A 154 LSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIE 233 (533)
T ss_dssp HHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEEC
T ss_pred hcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCC
Confidence 5 33 3444 47999999999999999998 789999999999999999999999999999998865 5678899
Q ss_pred HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH-hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR-KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
++++++.++++++++++++|+||||.++|.+++++|+++|+ +||+++|+||+|+++.+++. ++.... .+++++++
T Consensus 234 ~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~ 309 (533)
T 3f6t_A 234 PNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVY 309 (533)
T ss_dssp HHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEE
T ss_pred HHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEe
Confidence 99999999889999999999999999999999999999999 68999999999999876432 222222 35789999
Q ss_pred ccccccCCCCceEEEEEeeCCCcchhHHHHHHH--------------------------------Hhhhc-ccccCCchH
Q 014631 251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS--------------------------------IKGYL-NISSGPATF 297 (421)
Q Consensus 251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~-~~~~~~~~~ 297 (421)
||||.||++|+|+||+++++... . ..+++. +.... ..+.+++.+
T Consensus 310 S~SK~~g~~G~RiG~l~~~~~~~-~--~~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~ 386 (533)
T 3f6t_A 310 SYSKLFGCTGWRLGVIALNEKNV-F--DDNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTP 386 (533)
T ss_dssp ESHHHHTCGGGCEEEEEEESSCH-H--HHHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHH
T ss_pred cCcccCCCcccceEEEEECcHHH-H--HHHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChH
Confidence 99999999999999999975421 1 112221 12222 234567778
Q ss_pred HHHH----HHHHhh-----ccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc-c-cC-----
Q 014631 298 VQGA----VPQIFK-----NTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL-L-EG----- 361 (421)
Q Consensus 298 ~~~~----~~~~l~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~-~~----- 361 (421)
.|.+ +..+|. .....++++.++.++++++.+.+.|. + ++. ...|.+++|+|+.++... . .+
T Consensus 387 ~q~a~a~~a~~~L~~~~g~~~~~~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~ 463 (533)
T 3f6t_A 387 QQIMEALFSMTHLLTSTNGGSDDPYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRD 463 (533)
T ss_dssp HHHHHHHHHHHHHTTCBGGGTBCHHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHH
Confidence 8877 345563 22457888999999999999999997 5 666 457889999999886310 0 00
Q ss_pred ----CCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 362 ----ISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 362 ----~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
..++.+++.++++++||.+.||+.|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus 464 ~~~~~~~~~~~~~~ll~~~GV~v~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 464 YLTNNFEQVDFLLKLAEKNGVVLVDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp HHHHHCCHHHHHHHHHHHTTSSSCTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCHHHHHHHHHHhCCEEEeCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 014567888888899999999998876 579999999 6899999999999999988754
No 62
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=2.4e-44 Score=344.97 Aligned_cols=367 Identities=15% Similarity=0.142 Sum_probs=274.0
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCC-CCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDP-SAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
+++++.+++++++....+++.. .+++|+|+.|.| . ++.++.+.+++.++. ......|.+..|.+++|+++
T Consensus 18 ~~~~~~~~~~i~~~~~~~~~~~----~~~~i~l~~g~~~d----~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 18 GPGSMGKPDPILGLGQDFRMDP----AKRKVNLSIGVYRD----DADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp ---------CHHHHHHHHHHCC----CSSCEECCCSSCCC----TTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHH
T ss_pred hcCCCCCCChHHHHHHHHhhCC----CcCceeeeeeEEEC----CCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHH
Confidence 5678888999999988887654 578999999997 4 334445566666552 23346898999999999999
Q ss_pred HHHHhhhCCCCCCCCcEE--EcCCHHHHHHHHH---HHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631 96 ADYLNSELPCKLSPDDVY--LTAGCKQAIQVIL---TVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~--~~~g~~~al~~~~---~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 170 (421)
++++....+..+++++|. .+.|+++++..+. +.++++||+|++++|+|.++...++..|.+++.+++..++++++
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 999843211112267884 4889999988764 44568999999999999999999999999999999865667889
Q ss_pred CHHHHHhhhc---cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC--Cccccccc-CCCC
Q 014631 171 DLDGLEALAD---ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST--PYVRMGVF-GSTV 244 (421)
Q Consensus 171 d~e~l~~~~~---~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~ 244 (421)
|++++++.++ +.++++++++|+||||.+++.+++++|+++|++||+++|+||+|+++.+++. ...++..+ +..+
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 9999999885 2455667799999999999999999999999999999999999999887652 11222222 3456
Q ss_pred CEEEEcccccccCCCCceEEEE--EeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWL--VTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSK 316 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~ 316 (421)
++++++||||.|+++|+|+||+ ++++++ . .+.+.+.+.... ..+.+++.+.+.++..+|+... ....++
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~-~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAE-E--AKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQ 325 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHH-H--HHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHH-H--HHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 7899999999999999999997 554311 0 011555555543 2345777899999988887532 344677
Q ss_pred HHHHHHHHHHHHHHHhhcCC--C-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631 317 IVDILRDTADICYDRIKEIP--C-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLR 393 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR 393 (421)
.+++++++++++.+.|+++. + +. +..|.+++|.|+.++ .+++..+++++||.+.|| .|
T Consensus 326 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~--------~R 386 (409)
T 4eu1_A 326 MSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLN--------GR 386 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CE
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCC--------CE
Confidence 88899999999999999862 1 66 336788999986553 355777888889999986 39
Q ss_pred EEec-CCHHHHHHHHHHHHHHH
Q 014631 394 ITFA-IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 394 i~~~-~~~e~l~~~~~~l~~~~ 414 (421)
++++ .+++++++++++|++++
T Consensus 387 i~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 387 AAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp EEGGGCCTTTHHHHHHHHHHHH
T ss_pred EEEEecCHhhHHHHHHHHHHHh
Confidence 9998 67788999999998875
No 63
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=1.5e-43 Score=340.40 Aligned_cols=372 Identities=20% Similarity=0.259 Sum_probs=274.0
Q ss_pred hhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC----CCCCCCCCCCHHHHHHHHHHH
Q 014631 24 TLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE----FDCYSPSVGILPARRAIADYL 99 (421)
Q Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~y~~~~g~~~l~~~ia~~l 99 (421)
++.++..+..+.+. ..++++|+|+.|.|... .++.+.+.+++.+.+.+.. ...|++..|.+++|+++++++
T Consensus 14 ~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~ 88 (417)
T 3g7q_A 14 HSGITRLMEDLNDG---LRTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVLL 88 (417)
T ss_dssp --CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHhh---ccCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHHH
Confidence 44555555444322 23578999999987731 1122567777777665421 237999999999999999999
Q ss_pred hhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC-----eEEEc-CCCCcchHHHHhhc----CceeEeeeccCC-CCc
Q 014631 100 NSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA-----NILLP-KPGFPLYEANARHT----RLEIRHFDLLPE-KGW 168 (421)
Q Consensus 100 ~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd-----~Vl~~-~p~y~~~~~~~~~~----g~~~~~~~~~~~-~~~ 168 (421)
.+.+|+++++++|++|+|+++++++++++++++|| +|+++ +|+|+++...+... +..+...+++.+ .++
T Consensus 89 ~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (417)
T 3g7q_A 89 RETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFKY 168 (417)
T ss_dssp HHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEEE
T ss_pred HHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCccccc
Confidence 99889889999999999999999999999999987 89997 99999887665322 222333333222 246
Q ss_pred cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
.+|+++++ +.++++++++++|+||||.++|.+++++|+++|++||+++|+||+|+.+.. +....... .+..+++++
T Consensus 169 ~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~i~ 244 (417)
T 3g7q_A 169 HVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFP-GIIFSEAR-PLWNPNIIL 244 (417)
T ss_dssp ECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTT-CCBCSCCC-CCCCTTEEE
T ss_pred ccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCccccc-cccccccc-cCCCCCEEE
Confidence 68999988 677889999999999999999999999999999999999999999986321 11111111 123467899
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHH-HHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSK-IVDILRDTA 325 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~-~~~~~~~~~ 325 (421)
+.|||| ++++|+|+||++++ +++++.+..... ...+++++.+.++..+++... .....+ .++++++++
T Consensus 245 ~~s~sK-~~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 315 (417)
T 3g7q_A 245 CMSLSK-LGLPGSRCGIIIAN--------DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQRV 315 (417)
T ss_dssp EEESGG-GTCTTSCCEEEECC--------HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHHH
T ss_pred EEechh-ccCCCcceEEEEeC--------HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 999999 59999999999985 467777766553 345678899999988887633 233333 667788888
Q ss_pred HHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---------CCeEE
Q 014631 326 DICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---------KNWLR 393 (421)
Q Consensus 326 ~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~iR 393 (421)
+.+.+.|.+ +++ +. +..|.+++++|+.++... .+..++...+ .++||.+.||..|.. ++++|
T Consensus 316 ~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~iR 389 (417)
T 3g7q_A 316 QQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCMR 389 (417)
T ss_dssp HHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEEE
T ss_pred HHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeEE
Confidence 888888876 554 55 447888999999987421 1466676665 778999999998754 46899
Q ss_pred EEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 394 ITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 394 i~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+|++.+++++++++++|.++++++.+
T Consensus 390 is~~~~~~~i~~~~~~l~~~l~~~~~ 415 (417)
T 3g7q_A 390 MNYVPEPDKIEAGVKILAEEIERAWR 415 (417)
T ss_dssp EESCSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988764
No 64
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=1.1e-42 Score=326.96 Aligned_cols=323 Identities=17% Similarity=0.301 Sum_probs=263.3
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
..+|+|+.|.+. +++++.+ + + .....|++. +..++|+++++++ ++++++|++|+|++++++
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v--a----~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL--T----Q--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC--C----C--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH--h----h--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999855 3444444 1 1 134678765 4899999999999 467889999999999999
Q ss_pred HHHHHhcCCC-CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 124 VILTVLARPG-ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l~~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.++++++++| |+|++++|+|+++...++..|.+++.++.+ +++.+|++++++.++ +++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999988875 356789999999887 889999999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|+++|+ +|+++|+||+|+++.. + .++..+ +..+++++++|+||.|+++|+|+||++++ ++++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLAN--------EEVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEEC--------HHHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeC--------HHHH
Confidence 9999999999 9999999999998752 1 122222 34467899999999999999999999985 4577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+......+ +++++++.++.++|+.....++++.+++++++++++.+.|++++++... .|.+++|+|++++
T Consensus 234 ~~l~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~------ 305 (356)
T 1fg7_A 234 NLLMKVIAPY-PLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK------ 305 (356)
T ss_dssp HHHHHHSCSS-CSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET------
T ss_pred HHHHHhcCCC-CCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC------
Confidence 7777665433 6888999998888864222348888899999999999999988654313 5667889999886
Q ss_pred CCChHHHHHHHHhhcCeeEEe-CCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLP-GMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+..++...| .++||.+.+ |..|+..+++|++++ +++++++++++|+++
T Consensus 306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~-~~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVG-TREESQRVIDALRAE 354 (356)
T ss_dssp --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECC-CHHHHHHHHHHHHTC
T ss_pred --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeC-CHHHHHHHHHHHHhh
Confidence 356677766 778999999 888877789999998 478999999988753
No 65
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-43 Score=342.43 Aligned_cols=350 Identities=18% Similarity=0.172 Sum_probs=276.3
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHH--HHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAV--VDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
...+|||+.|.|... .+|.++.+.+++ .+.+... ....|++..|+++||+++++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 456799999987621 122233455555 4444432 3568999899999999999999 4788999999999
Q ss_pred HHHH--HHHHHHhcC--C----------CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCc
Q 014631 119 KQAI--QVILTVLAR--P----------GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENT 183 (421)
Q Consensus 119 ~~al--~~~~~~l~~--~----------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~ 183 (421)
++++ +++++++++ | ||+|++++|+|.++...++..|.+++.++++.+ ++|++++++.++ +++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence 9999 588888876 6 899999999999999999999999999998643 489999999884 567
Q ss_pred eEEEEe-CCCCCcccccCHHHHHHHHHHH-HhcCcEEEEcccccccccCCCCcc--ccccc----CCCCCEEEEcccccc
Q 014631 184 VAMVIV-NPGNPCGNVFTYQQLQKIAEKA-RKLGIMVISDEVYDHLTFGSTPYV--RMGVF----GSTVPVITLGSMSKR 255 (421)
Q Consensus 184 ~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK~ 255 (421)
++++++ +||||||.++|.+++++|+++| ++||+++|+||+|+.+.|.+.... ++..+ +..+++++++||||+
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 777655 7799999999999999999999 999999999999999877765422 23322 345689999999999
Q ss_pred cCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhc-c-chhHHHHHHHHHHHHHHHHHHHh
Q 014631 256 WIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKN-T-KEDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 256 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~-~-~~~~~~~~~~~~~~~~~~~~~~l 332 (421)
+++|+|+||++++ +++++.+..... ...+++.+.|.++..+++. . ...++.+.++.++++++.+.+.|
T Consensus 262 -~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 332 (427)
T 3ppl_A 262 -TLAGAGVSFFLTS--------AENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEIL 332 (427)
T ss_dssp -SCTTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCcCccEEEEEcC--------HHHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999986 356777766543 3457888999999999875 1 14667788888888888888887
Q ss_pred hc----CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCC-----CCCeEEEEecC-CHH
Q 014631 333 KE----IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVG-----MKNWLRITFAI-EPS 401 (421)
Q Consensus 333 ~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~iRi~~~~-~~e 401 (421)
.+ ++++. +..|.+|+|+|+.++.. +..++.. ++.++||.+.| |..|. .++++|+|++. +++
T Consensus 333 ~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~-~l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~ 404 (427)
T 3ppl_A 333 DSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAE-LAKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE 404 (427)
T ss_dssp HHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHH-HHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred HHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHH-HHHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence 64 22455 44788999999999742 3555554 56788999999 55554 35899999994 899
Q ss_pred HHHHHHHHHHHHHHHhhh
Q 014631 402 ALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~~~ 419 (421)
++++++++|.+++++...
T Consensus 405 ~i~~~~~~l~~~l~~~~~ 422 (427)
T 3ppl_A 405 ELEVAMDGVATCVLLAAA 422 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 999999999999987643
No 66
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=8.7e-43 Score=337.76 Aligned_cols=379 Identities=19% Similarity=0.297 Sum_probs=288.4
Q ss_pred hhhhhhhHHHHHHHHHHhccccCCCCee-eccCCCCCCCCCCCCcHHHHHHHHHHHhc-------CC----CCCCCCCCC
Q 014631 20 TATATLTVRSALTIIKQNLKENDPRPII-PLGHGDPSAFPCFRTTPVAADAVVDAVRS-------AE----FDCYSPSVG 87 (421)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~----~~~y~~~~g 87 (421)
+..+++.++..+..+.+.. ..+++| +|+.|.|... .+..+.+.+++.+.+.+ .. ...|++..|
T Consensus 10 ~~~~~~~~~~~~~~~~~~~---~~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g 84 (444)
T 3if2_A 10 KFTQPTGISQLMDDLGDAL---KSDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQG 84 (444)
T ss_dssp HHHSCCHHHHHHHHHHHHH---HSSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTC
T ss_pred hccCchhHHHHHHHHHhhh---cCchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCC
Confidence 3345677888777665543 247899 9999997731 11124556666666544 21 247999999
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC--------------eEEEc-CCCCcchHHH---
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA--------------NILLP-KPGFPLYEAN--- 149 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--------------~Vl~~-~p~y~~~~~~--- 149 (421)
++++|+++++|+.+.+|+++++++|++|+|+++++++++++++++|| +|+++ +|+|+++...
T Consensus 85 ~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~ 164 (444)
T 3if2_A 85 DSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVE 164 (444)
T ss_dssp CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSS
T ss_pred CHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhcccc
Confidence 99999999999999889889999999999999999999999999988 78876 9999988763
Q ss_pred ---HhhcCceeEeeeccCCC---CccCCHHHHHhh---hccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 150 ---ARHTRLEIRHFDLLPEK---GWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 150 ---~~~~g~~~~~~~~~~~~---~~~~d~e~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
....|..++.++.+.++ ++.+|+++++++ +.++++++++++|+||||.++|.+++++|+++|++||+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~ 244 (444)
T 3if2_A 165 GQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLII 244 (444)
T ss_dssp SCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred cchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 34456777777765322 357999999987 677899999999999999999999999999999999999999
Q ss_pred cccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHH
Q 014631 221 DEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQ 299 (421)
Q Consensus 221 De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 299 (421)
||+|+.+.. +....... ....++++++.||||+ +++|+|+||++++ +++.+.+..... ...+++++.+
T Consensus 245 De~~~~~~~-~~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 245 DNAYGMPFP-NIIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVAD--------AKVIEAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp ECTTCTTTT-CCBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECC--------HHHHHHHHHHHHHHHSSCCCHHH
T ss_pred ECCCCCccc-cccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEEC--------HHHHHHHHHHHHhccCCCChHHH
Confidence 999986321 11111111 1224578999999997 8999999999985 357777766543 3356788999
Q ss_pred HHHHHHhhccc-hhHHHH-HHHHHHHHHHHHHHHhhc-CCC--ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHh
Q 014631 300 GAVPQIFKNTK-EDFFSK-IVDILRDTADICYDRIKE-IPC--ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAK 374 (421)
Q Consensus 300 ~~~~~~l~~~~-~~~~~~-~~~~~~~~~~~~~~~l~~-~~g--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 374 (421)
.++..+++... .....+ .++.++++++.+.+.|.+ +++ +. +..|.+++++|+.++... .+..+++..+ .
T Consensus 314 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~ 387 (444)
T 3if2_A 314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----ISTLDLYERL-K 387 (444)
T ss_dssp HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SCHHHHHHHH-H
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CCHHHHHHHH-H
Confidence 99888887533 223333 566788888888888775 454 45 446888999999987421 1466676655 7
Q ss_pred hcCeeEEeCCCCCCC----------CeEEEEecCCHHHHHHHHHHHHHHHHHhhhc
Q 014631 375 EESVIVLPGMAVGMK----------NWLRITFAIEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 375 ~~gv~v~~g~~~~~~----------~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
++||.+.||..|... +++|++++.+++++++++++|.++++++.+.
T Consensus 388 ~~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~ 443 (444)
T 3if2_A 388 AKGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDN 443 (444)
T ss_dssp HTTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTC
T ss_pred HCCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHcc
Confidence 789999999988542 5899999989999999999999999887654
No 67
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=2.7e-42 Score=325.59 Aligned_cols=336 Identities=17% Similarity=0.301 Sum_probs=270.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|||+.|.+. +++++.+.+++.+.+.. ...|++ .+..++|+++++++ ++++++|++|+|+++++
T Consensus 23 ~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~al 89 (364)
T 1lc5_A 23 PDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETESI 89 (364)
T ss_dssp GGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHHH
T ss_pred ccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHHH
Confidence 5679999999854 45789999999988765 356754 57899999999998 46678999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
..+++++ +||+|++++|+|+++...++..|.+++.++.++++++.+ ++++.+.+.++++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~ 166 (364)
T 1lc5_A 90 FTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPERP 166 (364)
T ss_dssp HHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCHH
Confidence 9999998 679999999999999999999999999998765344443 5666666667788899999999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE-eeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV-TSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~ 281 (421)
++++|+++|++||+++|+||+|+.+.+++... +...+..++++++.|+||.|+++|+|+||++ ++ ++++
T Consensus 167 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~ 236 (364)
T 1lc5_A 167 LLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSD--------DAAM 236 (364)
T ss_dssp HHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCC--------HHHH
T ss_pred HHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECC--------HHHH
Confidence 99999999999999999999999987653322 2223445578999999999988999999999 64 4577
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+..... ..+++++.+.++.++|+. ..++++.+++++++++.+.+.|+++|++. +. +..++|+|+.++.
T Consensus 237 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~-~~~g~~~~~~~~~----- 306 (364)
T 1lc5_A 237 ARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-VY-PGRANYLLLRCER----- 306 (364)
T ss_dssp HHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-EC-CCSSSEEEEEESC-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-EC-CCCCeEEEEECCC-----
Confidence 77766544 347888999999999975 46788899999999999999999888888 43 4556788888763
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+..++...+ .++||.+.||..|.. ++++|++++ +.++++++++.|+++++++.
T Consensus 307 --~~~~l~~~l-~~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~~~~ 361 (364)
T 1lc5_A 307 --EDIDLQRRL-LTQRILIRSCANYPGLDSRYYRVAIR-SAAQNERLLAALRNVLTGIA 361 (364)
T ss_dssp --TTCCHHHHH-HTTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHC----
T ss_pred --cHHHHHHHH-HHCCcEEeeCcccCCCCCCEEEEEeC-CHHHHHHHHHHHHHHhhccc
Confidence 133466665 456999999988853 579999987 47788899999988877653
No 68
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=2e-43 Score=339.72 Aligned_cols=348 Identities=19% Similarity=0.194 Sum_probs=273.3
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHH--hcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAV--RSA-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+|+|+.|.|... .++.++.+.+++.+.+ ... ....|++..|.+++|+++++|+ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 4899999986411 1356667777776553 121 3568999999999999999999 4778999999999999
Q ss_pred H--HHHHHHhcCC------------CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEE
Q 014631 122 I--QVILTVLARP------------GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAM 186 (421)
Q Consensus 122 l--~~~~~~l~~~------------gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i 186 (421)
+ .++++++..+ +|+|++++|+|+++...++..|++++.++++.+ ++|++++++.+++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777777655 357999999999999999999999999998642 4899999998875 67887
Q ss_pred E-EeCCCCCcccccCHHHHHHHHHHHH-hcCcEEEEcccccc--cccCCCCcccccc----cCCCCCEEEEcccccccCC
Q 014631 187 V-IVNPGNPCGNVFTYQQLQKIAEKAR-KLGIMVISDEVYDH--LTFGSTPYVRMGV----FGSTVPVITLGSMSKRWIV 258 (421)
Q Consensus 187 ~-~~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~ 258 (421)
+ +++||||||.++|.+++++|+++|+ +||+++|+||+|+. +...+....++.. .+..+++++++||||+ ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 6899999999999999999999999 99999999999986 4433323333322 2445679999999999 88
Q ss_pred CCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc--hhHHHHHHHHHHHHHHHHHHHhhc-
Q 014631 259 PGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK--EDFFSKIVDILRDTADICYDRIKE- 334 (421)
Q Consensus 259 ~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~l~~- 334 (421)
+|+|+||++++ +++++.+..... ...+++.+.|.++..+|+... ..++++.++.++++++.+.+.|.+
T Consensus 262 ~GlriG~~~~~--------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (422)
T 3d6k_A 262 AGSGVSFFASS--------KENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR 333 (422)
T ss_dssp TTSSCEEEECC--------HHHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeC--------HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999986 357777766543 345788999999999997511 366777888888888888888764
Q ss_pred ---CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe-CCCCC-----CCCeEEEEec-CCHHHHH
Q 014631 335 ---IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP-GMAVG-----MKNWLRITFA-IEPSALE 404 (421)
Q Consensus 335 ---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~iRi~~~-~~~e~l~ 404 (421)
++++. +..|++|+|+|+.++.. +...+ ..++.++||.+.| |..|. ..+++|+|++ .++++++
T Consensus 334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~-~~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~ 405 (422)
T 3d6k_A 334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRV-VELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE 405 (422)
T ss_dssp HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHH-HHHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred cCcCCceE-EeCCCcceEEEEECCCC------CHHHH-HHHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence 32355 34788899999999742 24444 4567889999999 55563 2579999999 7999999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
+++++|++++++..+
T Consensus 406 ~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 406 VAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987754
No 69
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=3.3e-44 Score=342.58 Aligned_cols=370 Identities=19% Similarity=0.197 Sum_probs=274.5
Q ss_pred HhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCC-CCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHH
Q 014631 19 ITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPS-AFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIAD 97 (421)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~ 97 (421)
++.++++.++.....+++. .++++|||+.|.+. .....++++.+.+++.+.+.....+.|++..|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (396)
T 2q7w_A 5 ITAAPADPILGLADLFRAD----ERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQE 80 (396)
T ss_dssp CCCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHH
T ss_pred cccCCCchHHHHHHHHhcc----CCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHH
Confidence 4455566777776655532 25789999999843 122246779999999988765445689888999999999999
Q ss_pred HHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHH
Q 014631 98 YLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLD 173 (421)
Q Consensus 98 ~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e 173 (421)
++....+..+++++|++ |+|++++++.+++.+. .+||+|++++|+|+++...++..|.+++.++.++++++.+|++
T Consensus 81 ~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 160 (396)
T 2q7w_A 81 LLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFD 160 (396)
T ss_dssp HHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHH
T ss_pred HHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHH
Confidence 99654332245789998 9999999999987763 6999999999999999999999999999998864456789999
Q ss_pred HHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCC-CCcccccccCC-CCCEEE
Q 014631 174 GLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGS-TPYVRMGVFGS-TVPVIT 248 (421)
Q Consensus 174 ~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~ 248 (421)
++++.+++ +++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++ ....++..++. .+++++
T Consensus 161 ~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 240 (396)
T 2q7w_A 161 ALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIV 240 (396)
T ss_dssp HHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEE
Confidence 99998864 36677889999999999999999999999999999999999999988753 12223332322 357899
Q ss_pred EcccccccCCCCceEEEEEe--eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVT--SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIVDI 320 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~~~ 320 (421)
++|+||.|+++|+|+||+++ ++++ .. .++.+.+.... ..+.+++++.+.++.++|+... ..++++.+++
T Consensus 241 ~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~ 317 (396)
T 2q7w_A 241 ASSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQR 317 (396)
T ss_dssp EEECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CH
T ss_pred EEeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHH
Confidence 99999999889999999997 2211 00 13455544432 2344568899999988887531 3567788889
Q ss_pred HHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec
Q 014631 321 LRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA 397 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~ 397 (421)
++++++.+.+.|+++. ++. +..|.+++|+|+.++ . +++..+++++||.+.|| +|++++
T Consensus 318 ~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~ 378 (396)
T 2q7w_A 318 IQRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVA 378 (396)
T ss_dssp HHHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGG
T ss_pred HHHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEe
Confidence 9999999999999873 366 346788899887653 2 35666778889999874 599998
Q ss_pred -CCHHHHHHHHHHHHHHH
Q 014631 398 -IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~ 414 (421)
.+++++++++++|++++
T Consensus 379 ~~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 379 GMTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp GCCTTTHHHHHHHHHHHC
T ss_pred ecCHHHHHHHHHHHHhcC
Confidence 58999999999998763
No 70
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=5.1e-42 Score=323.30 Aligned_cols=333 Identities=17% Similarity=0.278 Sum_probs=272.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+.++|||+.|.+. +++++.+.+++.+.+... ..| +..+..++|+++++++ ++++++|++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~--~~y-~~~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKNL--GVY-PDVNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHGG--GSC-CCTTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHHh--cCC-CCccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 37889999999755 467899999999998763 467 4567899999999999 4678999999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
++.+++++ |+|+++.|+|+++...++..|.+++.++.+++++ ++++++++.+++ ++++++++|+||||.++|.
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENMC--IDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTSC--CCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCcccC--CCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 99999887 8999999999999999999999999999875444 677999999987 9999999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+++|++||+++|+||+|+++.++ .........+..+++++++|+||.++++|+|+||+++.+ +++.
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~ 235 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA 235 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence 99999999999999999999999998876 333333334455678999999999999999999998432 4677
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc-ccCCCCceeEEEEecCccccc
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT-CPRKPEGSMFVMVKLNLSLLE 360 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~-~~~~~~~~~~~~~~~~~~~~~ 360 (421)
+.+...... .+++++.+.++.++++. ..++++.+++++++++.+.+.|+++|++. +. +..+.|+|+.++.
T Consensus 236 ~~~~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~~~~~~~~~~~~~---- 306 (361)
T 3ftb_A 236 AKIKAKQNP-WNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRVF--SPHANFVLCRLEN---- 306 (361)
T ss_dssp HHHHTTSCT-TCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEEE--CCSSSEEEEEESS----
T ss_pred HHHHhhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCceec--CCCCeEEEEEcCC----
Confidence 777766553 47888999999999974 57888999999999999999999988876 33 4446678888864
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.+..++...+. ++||.+.||..|+. ++++|++++ +.++++++++.|+++.+
T Consensus 307 --~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 307 --ISGEKLYDSLL-KEDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp --SCHHHHHHHHH-TTTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHH-HCCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 14667777765 45999999998864 579999998 55667777777776654
No 71
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=3e-47 Score=363.09 Aligned_cols=352 Identities=18% Similarity=0.292 Sum_probs=292.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.++++|+.|++. +++++.+.+++.+++... ...|++. ..++++++++++.+.+|..+++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~ 103 (392)
T 3b1d_A 31 PQLLPAWIADMD----FEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAIS 103 (392)
Confidence 389999999865 577889999999888653 3467654 789999999999988887788899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCC-CccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEK-GWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~-~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~ 201 (421)
.+++++.++||+|+++.|+|+++...+...|.+++.++.++++ +|.+|++++++.+. ++++++++++|+||||.+++.
T Consensus 104 ~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (392)
T 3b1d_A 104 IAIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWER 183 (392)
Confidence 9999999999999999999999999999999999888875333 46789999999886 578888899999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC--CCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS--TVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+++++|+++|++||+++|+||+|+++.+++....++..++. .+++++++|+||.|+++|+|+||++++++ +
T Consensus 184 ~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~ 256 (392)
T 3b1d_A 184 EVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------T 256 (392)
Confidence 99999999999999999999999999887765555555543 56789999999999889999999998642 3
Q ss_pred HHHHHhhhcccc--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEEEEecCc
Q 014631 280 IVDSIKGYLNIS--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFVMVKLNL 356 (421)
Q Consensus 280 ~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~~~~~~~ 356 (421)
+++.+......+ ++++++.+.++.++|+. .+.++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~ 334 (392)
T 3b1d_A 257 LCAQFKHQQLVNNHHEVSSLGYIATETAYRY-GKPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSD 334 (392)
Confidence 666666554432 35688888888888864 3567888899999999999999987 78888 4578888888988864
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
.. .+..++...+++++||.+.||..|+. ++++|++++.+++++++++++|.++++
T Consensus 335 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 335 YG----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 21 13456676665678999999998863 578999999888999999999998875
No 72
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=1.2e-42 Score=342.37 Aligned_cols=350 Identities=17% Similarity=0.255 Sum_probs=269.8
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHH-hhhCCCCC---CCCcEEEcCCHHHH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYL-NSELPCKL---SPDDVYLTAGCKQA 121 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l-~~~~~~~~---~~~~i~~~~g~~~a 121 (421)
+|+|+.|.|. + +++.+.+++.+.+.. ..|+++.|..++++++++++ .++++.+. ++++|++|+|++++
T Consensus 106 ~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~ea 177 (546)
T 2zy4_A 106 SLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAA 177 (546)
T ss_dssp HHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHH
T ss_pred hhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHH
Confidence 7899999865 3 446666777777643 58999989999999977755 45444322 46899999999999
Q ss_pred HHHHHHH-----hcCCCCeEEEcCCCCcchHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 122 IQVILTV-----LARPGANILLPKPGFPLYEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 122 l~~~~~~-----l~~~gd~Vl~~~p~y~~~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
+..++.+ ++++||+|++++|+|++|...+... |.+++.++.+++++|.+|++++++.+.++++++++++|+||
T Consensus 178 l~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NP 257 (546)
T 2zy4_A 178 MAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNP 257 (546)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSS
T ss_pred HHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCC
Confidence 9999987 4789999999999999998876544 67888888877777889999999988778999999999999
Q ss_pred cccccCHHHHHHHHHHH--HhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 195 CGNVFTYQQLQKIAEKA--RKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
||.+++.+++++|+++| +++|++||+||+|+++.++. .++.... .+++++++||||.|+++|+|+||+++++.+
T Consensus 258 tG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~~---~s~~~~~-~~~~i~~~S~SK~~g~~GlRiG~~~~~~~~ 333 (546)
T 2zy4_A 258 PSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADDF---QSLFAIC-PENTLLVYSFSKYFGATGWRLGVVAAHQQN 333 (546)
T ss_dssp SCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTTC---CCHHHHC-GGGEEEEEESTTTTTCGGGCEEEEEEESSC
T ss_pred CCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhcccC---cCHHHhC-CCCEEEEEeCccccCCCCcceEEEEECCHH
Confidence 99999999999999999 78999999999999987532 2332322 357899999999999999999999997532
Q ss_pred cchhHHHHHHHHhh------------------------------------hc-ccccCCchHHHHHH-----HHHhhccc
Q 014631 273 GILQELRIVDSIKG------------------------------------YL-NISSGPATFVQGAV-----PQIFKNTK 310 (421)
Q Consensus 273 ~~~~~~~~~~~~~~------------------------------------~~-~~~~~~~~~~~~~~-----~~~l~~~~ 310 (421)
+++.+.. .. ..+.+.+.+.|.++ .++++. .
T Consensus 334 -------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~a~a~~a~~all~~-~ 405 (546)
T 2zy4_A 334 -------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALNHTAGLSTPQQVQMALFSLFALMDE-A 405 (546)
T ss_dssp -------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTGGGCSSCHHHHHHHHHHHHHHHHCT-T
T ss_pred -------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhhccCCCCcHHHHHHHHHHHHHHHhc-c
Confidence 2222210 00 11235677777764 234442 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccc--ccC---------CCChHHHHHHHHhhcCee
Q 014631 311 EDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSL--LEG---------ISDDMEFALQLAKEESVI 379 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~ll~~~gv~ 379 (421)
+.+.++.++.++++++.+.+.|. . ++. ...+.+++|+|++++... .++ ..++.+++.++++++||.
T Consensus 406 ~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~~~~~wl~~~~~~~~~l~~ll~~~gV~ 482 (546)
T 2zy4_A 406 DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGEAFSEWAVKQSSTGDMLFRIADETGIV 482 (546)
T ss_dssp CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccHHHHHHhhccCCHHHHHHHHHHHCCEE
Confidence 57788889999999999999886 4 454 346788999999885200 000 013456677788899999
Q ss_pred EEeCCCCCC-CCeEEEEecC-CHHHHHHHHHHHHHHHHHhh
Q 014631 380 VLPGMAVGM-KNWLRITFAI-EPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 380 v~~g~~~~~-~~~iRi~~~~-~~e~l~~~~~~l~~~~~~~~ 418 (421)
+.||..|+. .+++|+|++. +++++++++++|+++++++.
T Consensus 483 v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~ 523 (546)
T 2zy4_A 483 LLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELY 523 (546)
T ss_dssp CEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHH
T ss_pred EeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHH
Confidence 999999976 4689999994 89999999999999988765
No 73
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=3e-43 Score=338.86 Aligned_cols=369 Identities=17% Similarity=0.237 Sum_probs=285.2
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHH--HHHhcC-CCCCC-CCCCCCHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVV--DAVRSA-EFDCY-SPSVGILPAR 92 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~y-~~~~g~~~l~ 92 (421)
+.+.+.+++..+.+.+... ....|||+.|.|... .+|.++.+.+++. +.+..+ ....| ++..|++++|
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-------~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr 76 (423)
T 3ez1_A 5 EASRPALDLARQAYEAFKA-------RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSAR 76 (423)
T ss_dssp -CCHHHHHHHHHHHHHHHH-------HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhc-------CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHH
Confidence 4455555555555544332 456899999997621 1356677888775 444422 24689 8889999999
Q ss_pred HHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH--HHHHHhcC--C---------CCeEEEcCCCCcchHHHHhhcCceeEe
Q 014631 93 RAIADYLNSELPCKLSPDDVYLTAGCKQAIQ--VILTVLAR--P---------GANILLPKPGFPLYEANARHTRLEIRH 159 (421)
Q Consensus 93 ~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~--~~~~~l~~--~---------gd~Vl~~~p~y~~~~~~~~~~g~~~~~ 159 (421)
+++++++ ++++++|++|+|++++++ ++++++++ + ||+|++++|+|.++...++..|.+++.
T Consensus 77 ~~ia~~~------~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~ 150 (423)
T 3ez1_A 77 ALFAGYL------DVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLT 150 (423)
T ss_dssp HHHHHHT------TSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEE
T ss_pred HHHHHHh------CCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEe
Confidence 9999998 477899999999999998 88888877 7 599999999999999999999999999
Q ss_pred eeccCCCCccCCHHHHHhhh--ccCceEEEEe-CCCCCcccccCHHHHHHHHHHH-HhcCcEEEEcccccccccCC-C--
Q 014631 160 FDLLPEKGWEVDLDGLEALA--DENTVAMVIV-NPGNPCGNVFTYQQLQKIAEKA-RKLGIMVISDEVYDHLTFGS-T-- 232 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~-- 232 (421)
++++.+ ++|++++++.+ .+++++++++ +|+||||.+++.+++++|+++| ++||+++|+||+|+.+.+.+ .
T Consensus 151 v~~~~~---g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~ 227 (423)
T 3ez1_A 151 VDMQSD---GPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRA 227 (423)
T ss_dssp EEEETT---EECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCC
T ss_pred ccCCCC---CCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCC
Confidence 998643 48999999988 5678888654 8899999999999999999999 99999999999999765544 2
Q ss_pred Cccccccc----CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhh
Q 014631 233 PYVRMGVF----GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFK 307 (421)
Q Consensus 233 ~~~~~~~~----~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~ 307 (421)
...++..+ +..+++++++||||. +++|+|+||++++ +++++.+..... ...+++.+.|.++..+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~ 298 (423)
T 3ez1_A 228 EPVNFVVLARDAGYPDRAFVFASTSKI-TFAGAGLGFVASS--------EDNIRWLSKYLGAQSIGPNKVEQARHVKFLT 298 (423)
T ss_dssp CCCCHHHHHHHHTCTTSEEEEEESTTT-SCSSSSCEEEEEC--------HHHHHHHHHHHHHSCSCCCHHHHHHHHHHHH
T ss_pred CCcchhhhhhccCCCCeEEEEeCchhh-ccCCcceEEEEeC--------HHHHHHHHHHHhhhccCCCHHHHHHHHHHHH
Confidence 22233222 345688999999999 7899999999986 357777766543 345788899999988887
Q ss_pred c--cc-hhHHHHHHHHHHHHHHHHHHHhhc----CC-CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631 308 N--TK-EDFFSKIVDILRDTADICYDRIKE----IP-CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379 (421)
Q Consensus 308 ~--~~-~~~~~~~~~~~~~~~~~~~~~l~~----~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 379 (421)
. .. ..++.+.++.++++++.+.+.|.+ ++ ++. +..|.+|+|+|+.++.. +... +.++++++||.
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~-~~~~l~~~gv~ 370 (423)
T 3ez1_A 299 EYPGGLEGLMRDHAAIIAPKFRAVDEVLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADR-VVKLAEAAGVS 370 (423)
T ss_dssp HSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHH-HHHHHHHTTEE
T ss_pred hccchHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHH-HHHHHHHCCcE
Confidence 5 22 466777777888887777777654 42 255 44788999999999742 3344 44566888999
Q ss_pred EEe-CCCCCC-----CCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 380 VLP-GMAVGM-----KNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 380 v~~-g~~~~~-----~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.| |..|.. ++++|++++ .+++++++++++|.+++++...
T Consensus 371 v~~~g~~~~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 371 LTPAGATYPAGQDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CCCTTTTSSTTCCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred EecCcccccCCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 999 666642 579999998 5999999999999999987653
No 74
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=3.2e-43 Score=335.47 Aligned_cols=368 Identities=14% Similarity=0.149 Sum_probs=285.5
Q ss_pred hHHhhhhhhhHHHHHHHHHHhccccCCCCeeeccCCCCCC-CCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH
Q 014631 17 EHITATATLTVRSALTIIKQNLKENDPRPIIPLGHGDPSA-FPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI 95 (421)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i 95 (421)
++++.++++.++++...+++.. +++++||+.|.+.. ....++++.+.+++.+.+.....+.|++..|..++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~----~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~l 78 (394)
T 2ay1_A 3 GNLKPQAPDKILALMGEFRADP----RQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAM 78 (394)
T ss_dssp GGCCCCCCCSHHHHHHHHHHCC----CTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHH
T ss_pred ccCccCCCccHHHHHHHHHhCC----CccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHH
Confidence 3466777888999888777542 67899999998632 222467899999999987654456898888999999999
Q ss_pred HHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC
Q 014631 96 ADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD 171 (421)
Q Consensus 96 a~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d 171 (421)
++++... +.++++|++ |+|+++|++.+++.+.. +||+|++++|+|+++...++..|.+++.++.++++++++|
T Consensus 79 a~~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 155 (394)
T 2ay1_A 79 GELILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVD 155 (394)
T ss_dssp HHHHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEEC
T ss_pred HHHHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccC
Confidence 9998421 236789999 99999999999988754 9999999999999999999999999999988654567899
Q ss_pred HHHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCC-CcccccccC-CCCCE
Q 014631 172 LDGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGST-PYVRMGVFG-STVPV 246 (421)
Q Consensus 172 ~e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~~~ 246 (421)
++++++.+++. ++++++++|+||||.++|.+++++|+++|++||+++|+||+|+++.+++. ...++..+. ..+++
T Consensus 156 ~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (394)
T 2ay1_A 156 FEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEV 235 (394)
T ss_dssp HHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCE
Confidence 99999988643 56677799999999999999999999999999999999999999876531 111222222 13468
Q ss_pred EEEcccccccCCCCceEEEEEe--eCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-----hhHHHHHH
Q 014631 247 ITLGSMSKRWIVPGWRLGWLVT--SDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-----EDFFSKIV 318 (421)
Q Consensus 247 i~~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-----~~~~~~~~ 318 (421)
++++|+||.|+++|+|+||+++ ++++ .. ..+.+.+.... ..+.+++++.+.++.++|+... ..+.++.+
T Consensus 236 i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~ 312 (394)
T 2ay1_A 236 LIAASCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVR 312 (394)
T ss_dssp EEEEECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHH
T ss_pred EEEEeccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHH
Confidence 9999999999889999999997 3211 00 12333333222 2344568899999888887531 35678888
Q ss_pred HHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEE
Q 014631 319 DILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRIT 395 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~ 395 (421)
++++++++++.+.|+++. ++. +..|.+|+|+|+.++ . +.+..+++++||.+.|| +|++
T Consensus 313 ~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris 373 (394)
T 2ay1_A 313 SGMLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRIN 373 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEE
Confidence 999999999999998762 366 336777899997664 2 34566778889999875 5999
Q ss_pred ec-CCHHHHHHHHHHHHHH
Q 014631 396 FA-IEPSALEEGLGRIKAF 413 (421)
Q Consensus 396 ~~-~~~e~l~~~~~~l~~~ 413 (421)
++ ++++++++++++|+++
T Consensus 374 ~~~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 374 IAGLNDNTIPILARAIIEV 392 (394)
T ss_dssp GGGCCTTTHHHHHHHHHHH
T ss_pred eecCCHhhHHHHHHHHHHc
Confidence 98 6899999999999875
No 75
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=5.2e-41 Score=315.06 Aligned_cols=327 Identities=15% Similarity=0.226 Sum_probs=262.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++|||+.|.+. +++++.+.+++.+.+.. ...|++..+ .++|+++++++ ++++++|++|+|+++++
T Consensus 14 g~~~id~~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~al 80 (350)
T 3fkd_A 14 SSEIVNFSTTVWT----DGDKDHLEKHLVENLNC--IRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAAF 80 (350)
T ss_dssp --CCEECSCCSCC----CSCCHHHHHHHHHTGGG--GGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHHH
T ss_pred cccEEEccCCCCC----CCCCHHHHHHHHHhHhH--HhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 6899999999855 57889999999988743 357877666 99999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeec-cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDL-LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~-~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+++++++. ||+|+++.|+|.++...++..|++++.+++ +++++ +++ ++++++++++|+||||.+++.
T Consensus 81 ~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~~ 148 (350)
T 3fkd_A 81 YQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQR 148 (350)
T ss_dssp HHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCCH
Confidence 99999987 999999999999999999999999999987 43333 333 578899999999999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++++|+++|+++ ++|+||+|+.+.+.+... ....+..+++++++||||.++++|+|+||++++ +++.
T Consensus 149 ~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~--------~~~~ 216 (350)
T 3fkd_A 149 TEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVAN--------KDFM 216 (350)
T ss_dssp HHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECC--------HHHH
T ss_pred HHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeC--------HHHH
Confidence 9999999988765 999999999987665432 234455678899999999999999999999984 4677
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+++.+.+.++..+|+.. ..+.++.++.. ++++.+.+.|+++|++. + .|..+.|+|+.++..
T Consensus 217 ~~~~~~~~~-~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~---- 287 (350)
T 3fkd_A 217 KRVAAFSTP-WAVNALAIEAAKFILIHP-AQFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG---- 287 (350)
T ss_dssp HHHHTTCCT-TCSCHHHHHHHHHHHHCT-TTTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS----
T ss_pred HHHHHhCCC-CCCCHHHHHHHHHHHhCH-HHHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC----
Confidence 888776643 478889999999988753 22334444444 88889999999888988 4 455677888888742
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFAIEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+..++...|++++||.+.||..|+. .+++|++++ +.+++++++++|++++++..
T Consensus 288 --~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~~ 343 (350)
T 3fkd_A 288 --TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKYE 343 (350)
T ss_dssp --CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC--
T ss_pred --CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHhc
Confidence 4677777776658999999998865 679999988 66788888888888876643
No 76
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=2.2e-40 Score=312.96 Aligned_cols=331 Identities=18% Similarity=0.247 Sum_probs=270.4
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.|||+.|.+. ++.++.+.+++.+.+.+. ....|++..+ .++++++++++++.+|.++++++|++|+|++++++
T Consensus 32 ~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNENP----YPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCCC----SCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCCC----CCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 4899999864 568899999999988652 2457876655 89999999999988887888899999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~ 202 (421)
.+++++.++||+|++++|+|+++...++..|.+++.++.+ +++.+|++++++.+++ +++++++++|+||||.++|.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999998854 4567999999998877 789999999999999999977
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC-CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV-PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
++++|++ .+++++|+||+|+.+.++ .. .+...+..+ +++++.|+||.|+++|+|+||+++++ ++.
T Consensus 185 ~l~~l~~---~~~~~li~De~~~~~~~~-~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 250 (369)
T 3cq5_A 185 DVERIIN---VAPGIVIVDEAYAEFSPS-PS--ATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI 250 (369)
T ss_dssp HHHHHHH---HCSSEEEEECTTGGGCCS-CC--GGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred HHHHHHH---hCCCEEEEECCchhhcCC-cc--hHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence 7776666 456999999999997643 11 122223344 78999999999988999999999963 466
Q ss_pred HHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC
Q 014631 282 DSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG 361 (421)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 361 (421)
+.+...... .+++++.+.++.++++. ..++++.+++++++++.+.+.|++. |+. +. +..++|+|+.++.
T Consensus 251 ~~l~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~~~~~~~~~~~----- 319 (369)
T 3cq5_A 251 DAVMLVRLP-YHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-VV-PSESNFVFFGDFS----- 319 (369)
T ss_dssp HHHHTTSCT-TCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-EE-CCSSSEEEEECCS-----
T ss_pred HHHHHcCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-EC-CCCCeEEEEECCC-----
Confidence 777665543 36888999999888875 4577888899999999999999875 777 43 4556788888761
Q ss_pred CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 362 ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 362 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
+..++...+ .++||.+.|| +.++++|++++ +++++++++++|+++++
T Consensus 320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~ 366 (369)
T 3cq5_A 320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIK 366 (369)
T ss_dssp --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHT
T ss_pred --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHh
Confidence 456676665 6789999998 23689999998 78999999999998864
No 77
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=1.2e-39 Score=304.12 Aligned_cols=320 Identities=17% Similarity=0.231 Sum_probs=257.3
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
...+|+|+.+.+. +++++.+.+++.+.... ...|+ ..+..++|+++++++ ++++++|++|+|+++++
T Consensus 15 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~~~y~-~~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~l 81 (337)
T 3p1t_A 15 AAQAVCLAFNENP----EAVEPRVQAAIAAAAAR--INRYP-FDAEPRVMRKLAEHF------SCPEDNLMLVRGIDECF 81 (337)
T ss_dssp CCCCEECSSCCCC----SCCCHHHHHHHHHHGGG--TTSCC-TTHHHHHHHHHHHHH------TSCGGGEEEESHHHHHH
T ss_pred CCCceEeeCCCCC----CCCCHHHHHHHHHhhhh--hccCC-CCchHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 5689999999743 57889999999998765 45774 568899999999998 46788999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
+.++..+ +||+|++++|+|.++...++..|.+++.++.+. ++++|++++++. .+++++++++|+||||.++|.+
T Consensus 82 ~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~ 155 (337)
T 3p1t_A 82 DRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLTD--DLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAG 155 (337)
T ss_dssp HHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBCT--TSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHH
Confidence 9999988 999999999999999999999999999988753 567999999886 4678999999999999999977
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
++.+| |+++++ +|+||+|+.+...+.. . ....+++++++|+||.|+++|+|+||++++ +++.+
T Consensus 156 ~l~~l---~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~--------~~~~~ 218 (337)
T 3p1t_A 156 ELDQL---RQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGP--------SELIA 218 (337)
T ss_dssp HHHHH---HHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECC--------HHHHH
T ss_pred HHHHH---HHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeC--------HHHHH
Confidence 76655 557786 5669999987643321 1 223456899999999998999999999985 45777
Q ss_pred HHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCC
Q 014631 283 SIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGI 362 (421)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (421)
.+..... ..+++.+.+.++..+++. ..++.+..+++.++++.+.+.|+++ |+. +..+. +.|+|+..+.
T Consensus 219 ~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-~~~~~~~~~~------ 286 (337)
T 3p1t_A 219 AMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSE-ANFVLVENAA------ 286 (337)
T ss_dssp HHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCS-SSEEEEECTT------
T ss_pred HHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCC-CeEEEEEcCC------
Confidence 7766543 357788899998888874 3456677777888899999999988 887 43444 5566766642
Q ss_pred CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 363 SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 363 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
..++. .+++++||.+.||..|+.++++|+|++ +++++++++++|+++.
T Consensus 287 --~~~~~-~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~ 334 (337)
T 3p1t_A 287 --GERTL-RFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYS 334 (337)
T ss_dssp --THHHH-HHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHT
T ss_pred --HHHHH-HHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHh
Confidence 33444 456788999999999988899999998 6789999999988765
No 78
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=5.4e-42 Score=326.06 Aligned_cols=331 Identities=18% Similarity=0.203 Sum_probs=255.3
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHh--c-CCCCCCCCCCCC-----HHHHHHHHHHHhhhCCCCCCC-CcE
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVR--S-AEFDCYSPSVGI-----LPARRAIADYLNSELPCKLSP-DDV 112 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~-~~~~~y~~~~g~-----~~l~~~ia~~l~~~~~~~~~~-~~i 112 (421)
.+.++|+|+.|.|+ ++.++.+.+++.+... . .....|++..|. ++||+++|+|++ .+|..+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 47789999999976 4555666665533321 1 134579999998 999999999998 46777777 599
Q ss_pred EEcCCHHHHHHHHHHHhcCCCC----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631 113 YLTAGCKQAIQVILTVLARPGA----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 113 ~~~~g~~~al~~~~~~l~~~gd----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~ 188 (421)
++|+|+++++++++++++++|| +|++++|+|.++...++..|++++.++++.+ + +. .++++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l 163 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV 163 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence 9999999999999999999999 9999999999999999999999988887532 2 22 256889999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++||||||.+++ +|++.++.+++++|+||+|.. +. ..++.. ..+++++++||||.|+++|+|+||+++
T Consensus 164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~~-~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----PH-YTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----TT-TSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----CC-CCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence 999999999986 344422223399999999974 21 223322 345789999999999999999999997
Q ss_pred eCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc---------hhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 269 SDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK---------EDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~---------~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
++ +++++.+..... ...+++.+.|.++..+|+... +.++++.+++++++++.+.+.|+++|++
T Consensus 232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32 357777766653 245788899999999987532 4678899999999999999999988777
Q ss_pred cccCCC-------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHHH
Q 014631 339 TCPRKP-------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSALE 404 (421)
Q Consensus 339 ~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l~ 404 (421)
. +..| .+|+|+|+.++. . +++..+++++||.+.||..|+. .+++|+|++.++++++
T Consensus 305 ~-~~~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~ 374 (391)
T 3bwn_A 305 T-LPKYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN 374 (391)
T ss_dssp E-CCCCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred c-cccCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence 6 3233 445689998863 1 2345567889999999999976 6799999999999999
Q ss_pred HHHHHHHHHHHHh
Q 014631 405 EGLGRIKAFCQRH 417 (421)
Q Consensus 405 ~~~~~l~~~~~~~ 417 (421)
+++++|++++++.
T Consensus 375 ~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 375 VFLERLANMKLIK 387 (391)
T ss_dssp HHHHHHHSCC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887653
No 79
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=1.2e-39 Score=307.00 Aligned_cols=330 Identities=16% Similarity=0.298 Sum_probs=265.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.+..+|+|+.|.+. +++++.+.+++.+.+... ....|+. .+..++|+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~-~~~~~lr~~la~~~------g~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNENP----YPPSPEVVKAILEELGPDGAALRIYPS-ASSQKLREVAGELY------GFDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCCS----SCCCHHHHHHHHHHHTTTCGGGGSCCC-SSCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred cccceeeccCCCCC----CCCCHHHHHHHHHHHhcccchhhcCCC-CchHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence 36789999999865 678999999999998763 1346754 45799999999999 36789999999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccccc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~ 199 (421)
++++.++++++++||+|++++|+|.++...++..|.+++.++.+. ++.+ +++++.+ +++++++++|+||||.++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence 999999999999999999999999999999999999999998753 3334 5554443 356889999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+.+++ .++|+++|+++|+||+|+++. +.....+ .+..+++++++|+||.|+++|+|+||++++ ++
T Consensus 167 ~~~~l---~~l~~~~~~~li~De~~~~~~--~~~~~~~--~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~ 231 (360)
T 3hdo_A 167 PLEYI---DELARRCAGMLVLDETYAEFA--ESNALEL--VRRHENVVVTRTLSKSYSLAGMRIGLAIAR--------PE 231 (360)
T ss_dssp CHHHH---HHHHHHBSSEEEEECTTGGGS--SCCCTHH--HHHCSSEEEEEESTTTTSCTTSCCEEEECC--------HH
T ss_pred CHHHH---HHHHHHCCCEEEEECChHhhC--CcchhHH--hccCCCEEEEecchHhhcCCccceeeEeeC--------HH
Confidence 87655 556678999999999999863 3322222 233467899999999999999999999984 46
Q ss_pred HHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccc
Q 014631 280 IVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL 359 (421)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 359 (421)
+.+.+...... .+++++.+.++.++|+. ..++++.+++++++++++.+.|+++ ++. + .+..+.|+|+.++..
T Consensus 232 ~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~~-- 303 (360)
T 3hdo_A 232 VIAALDKIRDH-YNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPDR-- 303 (360)
T ss_dssp HHHHHHHHSCS-CCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTTC--
T ss_pred HHHHHHHhCCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCCC--
Confidence 77777766543 47889999999999975 5678899999999999999999988 887 4 355577888877531
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
+..++...+ .++||.+.++..+..++++|++++ +++++++++++|+++.+..
T Consensus 304 ----~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~ 355 (360)
T 3hdo_A 304 ----DGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGH 355 (360)
T ss_dssp ----CHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC--
T ss_pred ----CHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhccc
Confidence 456666654 678999999877556789999998 7899999999999886544
No 80
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=3.4e-41 Score=323.68 Aligned_cols=331 Identities=15% Similarity=0.181 Sum_probs=265.3
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCC-C---CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSV-G---ILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~-g---~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
...+|+|+.|.|. ++.++.+++++.+.+...... .|++.. | .++||+++++|+++..+..+++++|++|+
T Consensus 55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 4578999999975 466788888888777432222 488888 8 99999999999998776667899999999
Q ss_pred CHHHHHHHHHHHh--------cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631 117 GCKQAIQVILTVL--------ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 117 g~~~al~~~~~~l--------~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~ 188 (421)
|+++++++++.++ +++||+|+++.|+|.++...++..|.+++. +.+|++++++.++++++++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l 202 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV 202 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEE
Confidence 9999999999999 899999999999999999999999988764 346788898888878899999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++||||||.+++ +.+ + ++..+.|+++.+ . ..++..+. .+++++++||||.|+++|+|+||+++
T Consensus 203 ~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~~----~--~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~ 265 (427)
T 2hox_A 203 TSPNNPEGLLRH-AVI-------K--GCKSIYDMVYYW----P--HYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI 265 (427)
T ss_dssp ESSCTTTCCCCC-CSS-------T--TCEEEEECTTCS----T--TTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred cCCCCCcccccH-HHH-------c--CCCEEEeecccC----C--CCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence 999999999999 422 2 556778877743 1 12233333 45789999999999999999999999
Q ss_pred eCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhcc----------chhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 269 SDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNT----------KEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
++ +++++.+...... ..+++.+.|.++..+|+.. .+.++++.+++++++++.+.+.|++++|
T Consensus 266 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 266 KD-------ESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp CC-------HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 53 3577777766542 3578889999988888752 1356677889999999999999998877
Q ss_pred ccc--c-----------CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEecCCHHHH
Q 014631 338 ITC--P-----------RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFAIEPSAL 403 (421)
Q Consensus 338 ~~~--~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~~~~e~l 403 (421)
+.+ . ..|.+++|+|++++. +..+++..+++++||.++||..|+. ++++|+|++.+++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l 411 (427)
T 2hox_A 339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF 411 (427)
T ss_dssp EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred ccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHH
Confidence 663 1 135668999999864 2345677777788999999998876 789999999999999
Q ss_pred HHHHHHHHHHHHH
Q 014631 404 EEGLGRIKAFCQR 416 (421)
Q Consensus 404 ~~~~~~l~~~~~~ 416 (421)
++++++|.+++++
T Consensus 412 ~~~l~~l~~~~~~ 424 (427)
T 2hox_A 412 DQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=8e-39 Score=298.29 Aligned_cols=316 Identities=18% Similarity=0.269 Sum_probs=253.3
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.++++|+.|.+. ++.++.+.+++.+.+.......|+. .+..++|+++++++++. .+++++|++|+|++++++
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999864 4678999999998874333456754 46899999999999643 256889999999999999
Q ss_pred HHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 124 VILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 124 ~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
.+++++ ||+|+++ |+|+++...++..|.+++.++.+ +++.+|++++ ++++++++++|+||||.++|.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999988 8999999 99999999999999999888874 3466888776 46888989999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
+++|+++| | ++|+||+|+++... .. +..++..+++++++|+||.|+++|+|+||++++ +++++.
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~--------~~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVAS--------EKFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEEC--------HHHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeC--------HHHHHH
Confidence 99888877 7 89999999986532 21 222344557899999999998899999999995 357777
Q ss_pred HhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCC
Q 014631 284 IKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGIS 363 (421)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (421)
+...... .+++++.+.++.++|+. ..++++.+++++++++++.+.|+++ |+. + .|.+++|+|+.++..
T Consensus 224 l~~~~~~-~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~~------ 291 (335)
T 1uu1_A 224 YNRVRLP-FNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEKE------ 291 (335)
T ss_dssp HHHHSCT-TCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCTH------
T ss_pred HHHhcCC-CCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCCC------
Confidence 7665433 47888999999999975 4578888899999999999999987 776 4 456678899888631
Q ss_pred ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 364 DDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 364 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+..++...+ .++||.+.|+ ++++|+|++. .+++++++++|+++
T Consensus 292 ~~~~~~~~l-~~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 EKERLLEHL-RTKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHH-HHHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHH-HHCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 245666665 4679999983 4789999975 57799999988754
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=2.3e-37 Score=295.32 Aligned_cols=337 Identities=14% Similarity=0.133 Sum_probs=260.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
+..++||+.|.| +++++++.+.+++.+.+.... ...|.+..|..++++.+++++.+.+| .+++++|+|+++
T Consensus 42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g----~~~v~~~~ggt~ 114 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVG----KEAAILFSTGFQ 114 (398)
T ss_dssp TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT----CSEEEEESSHHH
T ss_pred CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhC----CCcEEEECCHHH
Confidence 567899999975 234578999999999886532 22455667778888888888888766 358999999999
Q ss_pred HHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCCCCcc
Q 014631 121 AIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPGNPCG 196 (421)
Q Consensus 121 al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~nptG 196 (421)
++..+++++.++||.|++++|+|.++...++..|.+++.++. +|++++++.+++ +++++++++|+||||
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG 187 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG 187 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 999999999999999999999999999999999999988875 478999988865 688899999999999
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC-EEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 275 (421)
.+++ +++|.++|++||+++|+||+|+.+.++.........++..++ .++++|+||+++.+| ||++++
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~------ 255 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGD------ 255 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEEC------
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeC------
Confidence 9976 889999999999999999999987653221111122222233 488999999998778 999985
Q ss_pred hHHHHHHHHhhhc--ccccCCchHHHH-HHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEE
Q 014631 276 QELRIVDSIKGYL--NISSGPATFVQG-AVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMV 352 (421)
Q Consensus 276 ~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~ 352 (421)
+++++.+.... ....+.+.+.+. ++.++|+. ..+.++.+++++++++++.+.|+++ |+. +..|. ++++|+
T Consensus 256 --~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-g~~~~~ 328 (398)
T 3a2b_A 256 --ADVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGATE-SPILPI 328 (398)
T ss_dssp --HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSCC-SSEEEE
T ss_pred --HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCCC-CCEEEE
Confidence 35667666532 222334445554 45577764 2345678889999999999999988 877 43454 688998
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.++... +..++...++ ++||.+.||..|.. .+++|++++ ++++++++++++|+++++++.
T Consensus 329 ~~~~~~-----~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 329 FIRSNE-----KTFWVTKMLQ-DDGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp ECCCHH-----HHHHHHHHHH-HTTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred EcCCHH-----HHHHHHHHHH-HCCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 886321 2456666665 45999999988753 578999998 599999999999999998764
No 83
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=1.9e-36 Score=290.98 Aligned_cols=336 Identities=14% Similarity=0.203 Sum_probs=254.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCC--CCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE------FDCYSP--SVGILPARRAIADYLNSELPCKL-SPDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~ 113 (421)
+.++++|+.|.+. +.|+.+.+++.+.+.... ...|++ ..+..++++.++++++ . ++++++
T Consensus 26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 94 (420)
T 1t3i_A 26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFIN------ARSPREIV 94 (420)
T ss_dssp TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 3458999999865 567899999999887521 123443 3567889999999984 3 578999
Q ss_pred EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
+|+|+++++..++.++ .++||+|++++|+|++ +...++..|.+++.++.+ .++.+|++++++.+++++++
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 172 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL 172 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence 9999999999999999 8999999999999998 556677889999998875 45668999999999888999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
|++++|+||||.+++ +++|.++|++||+++|+|++|+.+.. ...+..++ ..+++.|+||.++.+| +||
T Consensus 173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~ 240 (420)
T 1t3i_A 173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGF 240 (420)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence 999999999999988 88999999999999999999987432 11222332 3488899999887777 899
Q ss_pred EEeeCCCcchhHHHHHHHHhhhcc---------------------cccCCchHHHHHHH-HHhhccchhHHHHHHHHHHH
Q 014631 266 LVTSDPSGILQELRIVDSIKGYLN---------------------ISSGPATFVQGAVP-QIFKNTKEDFFSKIVDILRD 323 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 323 (421)
++++ +++.+.+..... ...+.+.+.+.++. .+++...+.++++..+++++
T Consensus 241 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 312 (420)
T 1t3i_A 241 LYGK--------EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 312 (420)
T ss_dssp EEEC--------HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEc--------hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 9985 356676654431 11234445555433 34543223457788899999
Q ss_pred HHHHHHHHhhcCCCccccCCCC-----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCC
Q 014631 324 TADICYDRIKEIPCITCPRKPE-----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKN 390 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~ 390 (421)
+++++.+.|++++++.+. .|. .+.++++.++.. +..++.. .+.++||.+.+|..| +.++
T Consensus 313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~~~-~l~~~gi~v~~~~~~~~~~~~~~g~~~ 384 (420)
T 1t3i_A 313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAGL------HASDVAT-MVDQDGIAIRSGHHCTQPLHRLFDASG 384 (420)
T ss_dssp HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETTB------CHHHHHH-HHHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECCC------CHHHHHH-HHHHCCeEEeeccccchHHHHhcCCCC
Confidence 999999999998888743 443 244555566521 3556654 557789999998644 3367
Q ss_pred eEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 391 WLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 391 ~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++|++++ ++++++++++++|+++++++++
T Consensus 385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 385 SARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 8999998 5899999999999999887653
No 84
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=3.9e-36 Score=287.47 Aligned_cols=333 Identities=14% Similarity=0.165 Sum_probs=252.0
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CCC------CCCCCCCHHHHHHHHHHHhhhCCCCC-CCCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FDC------YSPSVGILPARRAIADYLNSELPCKL-SPDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~-~~~~i~ 113 (421)
|.++++|+.+.+. +.++.+.+++.+.+.... .+. |.+..+..++++.++++++ . ++++|+
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~ 89 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFIN------ARSAEELV 89 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHTT------CSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHcC------CCCCCeEE
Confidence 4568999999865 467899999999987531 111 1234567889999999873 3 578999
Q ss_pred EcCCHHHHHHHHHHHh----cCCCCeEEEcCCCCcchH----HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE
Q 014631 114 LTAGCKQAIQVILTVL----ARPGANILLPKPGFPLYE----ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA 185 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l----~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~ 185 (421)
+|+|+++++..++.++ .++||+|+++.|+|++.. ..++..|.+++.++.+. ++.+|++++++.+++++++
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence 9999999999999999 899999999999998653 34667899999988753 4568999999999888999
Q ss_pred EEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEE
Q 014631 186 MVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGW 265 (421)
Q Consensus 186 i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 265 (421)
|++++|+||||.+++ +++|.++|++||+++|+|++|+.+. ....+..+ +..+++.|+||.++.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~----~~~~~~~~---~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMH----HPVDVQAL---DCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTT----SCCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCC----CCCccccc---CCCEEEEEchhccCCCC--cEE
Confidence 999999999999988 8899999999999999999998732 11122222 24588899999998777 899
Q ss_pred EEeeCCCcchhHHHHHHHHhhhcc----------------------cccCCchHHHHHHH-HHhhccchhHHHHHHHHHH
Q 014631 266 LVTSDPSGILQELRIVDSIKGYLN----------------------ISSGPATFVQGAVP-QIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~ 322 (421)
++++ +++++.+..... ...+.+.+.+.++. ++++...+.++++..++++
T Consensus 236 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 307 (406)
T 1kmj_A 236 LYVK--------EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ 307 (406)
T ss_dssp EEEC--------HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEe--------HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 9985 356666654321 11223445554433 5555432346778888999
Q ss_pred HHHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------CCCCeE
Q 014631 323 DTADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------GMKNWL 392 (421)
Q Consensus 323 ~~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~i 392 (421)
++++++.+.|+++|++.+. .+ .++++. +.++. .+..++.. .+.++||.+.+|..| +.++++
T Consensus 308 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~-~~~~~------~~~~~~~~-~l~~~gi~v~~g~~~~~~~~~~~g~~~~i 378 (406)
T 1kmj_A 308 NLMHYALSQLESVPDLTLY-GPQNRLGVIA-FNLGK------HHAYDVGS-FLDNYGIAVRTGHHCAMPLMAYYNVPAMC 378 (406)
T ss_dssp HHHHHHHHHHTTSTTEEEE-SCTTCCSEEE-EEETT------CCHHHHHH-HHHHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHhcCCCeEEe-cCCCcCCEEE-EEECC------CCHHHHHH-HHhhCCcEEEeccccchHHHHhcCCCCeE
Confidence 9999999999998888743 55 555444 45642 13556664 457789999998754 336899
Q ss_pred EEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 393 RITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 393 Ri~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
|++++ +++++++++++.|+++++.+
T Consensus 379 Ris~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 379 RASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 99998 59999999999999998765
No 85
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.8e-36 Score=285.75 Aligned_cols=318 Identities=12% Similarity=0.138 Sum_probs=248.2
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEEEc
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANILLP 139 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl~~ 139 (421)
+.++.+.+++.+.+.. .|++. ..++++.+++++.+.+| .+++ ++++|+|+++++..++.+++++||+|+++
T Consensus 44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g--~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQ--TENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHT--CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhC--CCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 5678888888765432 45432 45777888888877766 3567 89999999999999999999999999999
Q ss_pred CCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 140 KPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 140 ~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
+|+|++ +...++..|++++.++.+. ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|+++|+
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 190 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT 190 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence 999999 8888899999999998754 456899999999887 8899999999999999976 7889999999999
Q ss_pred EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh---------
Q 014631 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------- 287 (421)
Q Consensus 217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------- 287 (421)
++|+||+|+. |.....+ ...+..+++.|+||+++.++ |+||++++ +++++.+...
T Consensus 191 ~li~Dea~~~----g~~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~--------~~~~~~~~~~~~~~~~~~~ 254 (393)
T 1vjo_A 191 LLLVDTVTSL----GGVPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMS--------SRAIEKLQRRRTKVANWYL 254 (393)
T ss_dssp EEEEECTTTT----TTSCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEEC--------HHHHHHHHTCSSCCSCSTT
T ss_pred EEEEECCccc----cCcCCcc---cccCccEEEEcCcccccCCC-ceEEEEEC--------HHHHHHHhccCCCCCceec
Confidence 9999999993 2222222 22334588999999988887 99999996 3466665321
Q ss_pred -----------ccccc-CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---eeEEEE
Q 014631 288 -----------LNISS-GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG---SMFVMV 352 (421)
Q Consensus 288 -----------~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~---~~~~~~ 352 (421)
..... +++.+.+.++.++++...+.++++.+++++++++++.+.|+++ ++. +..|.+ +.++++
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~ 332 (393)
T 1vjo_A 255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTTV 332 (393)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEEE
T ss_pred CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEEE
Confidence 01122 6788889988888875334567888999999999999999988 887 435543 346677
Q ss_pred ecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHH
Q 014631 353 KLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~ 414 (421)
.++.. .+..++...+++++||.+.||..|..++++|+++ + .+++++++++++|++++
T Consensus 333 ~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 333 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 76532 1466777776555599999999887789999995 3 56778999999999876
No 86
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.1e-35 Score=282.38 Aligned_cols=323 Identities=13% Similarity=0.104 Sum_probs=250.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
+.++.+.+++.+.+. ..|++. ..++++.+++++.+.+|.+ +++++++|+|+++++..++.+++++||+|++++
T Consensus 30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~ 102 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI 102 (386)
T ss_dssp CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence 567888887766543 245432 2678888888888777754 467899999999999999999999999999999
Q ss_pred CCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 141 PGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 141 p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
|+|++ +...+...|++++.++.+. ++.+|++++++.+ .++++++++++|+||||.+.+ +++|.++|++||+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK 177 (386)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence 99998 8888899999999998754 4568999999988 457899999999999999965 7999999999999
Q ss_pred EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh-----------
Q 014631 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK----------- 285 (421)
Q Consensus 217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~----------- 285 (421)
++|+|++|+.+.+. .++.. .+..+++.|+||+++.++ ++||+++++ ++.+.+.
T Consensus 178 ~li~D~a~~~~~~~----~~~~~---~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~~ 241 (386)
T 2dr1_A 178 LVFVDAVSAMGGAD----IKFDK---WGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFDI 241 (386)
T ss_dssp EEEEECTTTBTTBC----CCTTT---TTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTCH
T ss_pred eEEEEccccccCcc----ccccc---cCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEeH
Confidence 99999999975431 12222 234588999999987662 389999963 4555442
Q ss_pred -----hh---cccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC---ceeEEEEe
Q 014631 286 -----GY---LNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPRKPE---GSMFVMVK 353 (421)
Q Consensus 286 -----~~---~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~---~~~~~~~~ 353 (421)
.. ....++++.+.+.++.++++..... ++++.+++++++++++.+.|+++ ++.+. .+. .+.++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~ 319 (386)
T 2dr1_A 242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVL 319 (386)
T ss_dssp HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEE
T ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEE
Confidence 11 1223467888888888888753223 47888999999999999999988 87733 453 36788888
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++.. .+..++...|.+ +||.+.+|..+...+++|++++ ++++++++++++|+++++++..
T Consensus 320 ~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 381 (386)
T 2dr1_A 320 TPPG-----IKGDEVYEAMRK-RGFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELKK 381 (386)
T ss_dssp CCTT-----CCHHHHHHHHHH-TTEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----CCHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcCC
Confidence 8632 146677777655 5999999987666789999998 6999999999999999987643
No 87
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=7.5e-35 Score=276.48 Aligned_cols=332 Identities=14% Similarity=0.097 Sum_probs=245.4
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-------CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-------CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-------~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
+.|+.+... +.++.+.+++.+.+...... .|.+..+..++++.+++++ ++++++|++|+|++
T Consensus 3 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 71 (384)
T 1eg5_A 3 VYFDNNATT-----RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCAT 71 (384)
T ss_dssp EECBTTTCC-----CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHH
T ss_pred EEEecCccC-----CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHH
Confidence 566666533 67899999999998752100 0222345688999999998 35678999999999
Q ss_pred HHHHHHHHHhc----CCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631 120 QAIQVILTVLA----RPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 120 ~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
+++..+++++. ++||+|++++|+|+++...+ ...|.+++.++.++ ++.+|++++++.++++++++++++|+
T Consensus 72 ~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 149 (384)
T 1eg5_A 72 ESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAAN 149 (384)
T ss_dssp HHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBC
T ss_pred HHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCC
Confidence 99999999987 79999999999999886655 67899999888753 45689999999998889999999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcC--cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLG--IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
||||.+++ +++|.++|+++| +++|+|++|+. +.....+..+ +..+++.|+||+++.+| +||+++++
T Consensus 150 nptG~~~~---~~~i~~l~~~~~~~~~li~Dea~~~----~~~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~ 217 (384)
T 1eg5_A 150 NEVGTIQP---VEDVTRIVKKKNKETLVHVDAVQTI----GKIPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRK 217 (384)
T ss_dssp TTTCBBCC---HHHHHHHHHHHCTTCEEEEECTTTT----TTSCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECT
T ss_pred CCcccccC---HHHHHHHHHhcCCceEEEEEhhhhc----CCcccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcC
Confidence 99999988 688889999999 99999999983 2112222222 34588899999988878 79999974
Q ss_pred CCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-C
Q 014631 271 PSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-E 345 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~ 345 (421)
... +...+... ....++++.+.+.++..+++. ...++++..++++++++++.+.|++ +++.+. .+ .
T Consensus 218 ~~~------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~-~~~~ 288 (384)
T 1eg5_A 218 GVP------IRPLIHGGGQERGLRSGTQNVPGIVGAARAMEI-AVEELSEAAKHMEKLRSKLVSGLMN-LGAHII-TPLE 288 (384)
T ss_dssp TSC------CCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHH-HHHTHHHHHHHHHHHHHHHHHHHHT-TTCEEC-SCTT
T ss_pred CCc------cccccccCcccccccCCCCChHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhCC-CCeEEe-CCcc
Confidence 210 01111110 112346788888888888874 2356788899999999999999998 587743 33 2
Q ss_pred c--eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHH
Q 014631 346 G--SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSA 402 (421)
Q Consensus 346 ~--~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~ 402 (421)
+ +.+.++.++. .+..++...| .++||.+.+|..|+. .+++|++++ +++++
T Consensus 289 ~~~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~ 361 (384)
T 1eg5_A 289 ISLPNTLSVSFPN------IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEE 361 (384)
T ss_dssp SBCTTEEEEECTT------CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHH
T ss_pred cCCCCEEEEEeCC------CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHH
Confidence 2 2356666652 1456666655 678999999886642 368999998 79999
Q ss_pred HHHHHHHHHHHHHHhhh
Q 014631 403 LEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 403 l~~~~~~l~~~~~~~~~ 419 (421)
+++++++|+++++++++
T Consensus 362 i~~~~~~l~~~~~~~~~ 378 (384)
T 1eg5_A 362 VDYFLKKIEEILSFLDL 378 (384)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999987643
No 88
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=1e-34 Score=277.07 Aligned_cols=335 Identities=13% Similarity=0.122 Sum_probs=248.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC----C--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF----D--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
+.+++||+.|+|. +++.++.+.+++.+.+.+... . .|+...+..++++.++++++ . ++.++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~------~-~~~i~~~- 110 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFLG------T-DDTILYS- 110 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHHT------C-SEEEEES-
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHHC------C-CcEEEEC-
Confidence 4568999999542 235689999999988875211 1 12233346889999999883 2 3455555
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~ 190 (421)
+|++++..++.+++++||.|+++.|+|.++...++..|.+++.++. .|++++++.+++ +++++++++
T Consensus 111 sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 111 SCFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp CHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred chHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 5578999999999999999999999999999999999999988875 366788877755 788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
|+||||.+++ +++|.++|++||+++|+||+|+...++..........+. .+..++++|+||+|+ |.+.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999988 889999999999999999999743332222111222221 234588999999987 4455999986
Q ss_pred CCCcchhHHHHHHHHhhhcc---cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 270 DPSGILQELRIVDSIKGYLN---ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++++.+..... ..++.++..+.++.++++.. ..+.++.+++++++++++.+.|+++ |+. +. +..
T Consensus 259 --------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~ 326 (399)
T 3tqx_A 259 --------KEIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELL-KTEGPQLRKQLQENSRYFRAGMEKL-GFQ-LV-PGN 326 (399)
T ss_dssp --------HHHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHHH-TCC-BC-CCS
T ss_pred --------HHHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHc-CCC-cC-CCC
Confidence 356666665421 23467777777777777642 2567888999999999999999987 777 43 445
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+.++|+.++... +..++...++ ++||.+.|+..+.. .+++|++++ ++++++++++++|+++++++.
T Consensus 327 ~~~~~~~~~~~~-----~~~~~~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 327 HPIIPVMLGDAQ-----LATNMADHLL-QEGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp SSEEEEEEECHH-----HHHHHHHHHH-HTTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEeCCHH-----HHHHHHHHHH-HCCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 667888876421 2456666664 57999998765532 368999997 799999999999999998753
No 89
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=2.1e-35 Score=280.90 Aligned_cols=330 Identities=13% Similarity=0.104 Sum_probs=246.8
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC---CC---CCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE---FD---CYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
+++++|+.+.+. +.|+.+.+++.+.+.... .. .|+. ..+..++++.+++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQG-----ILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTCC-----CCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCccC-----CCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 457899888633 567889999998876521 11 2432 256789999999997 35678999999
Q ss_pred CHHHHHHHHHHHh-cCCCCeEEEcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 117 GCKQAIQVILTVL-ARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 117 g~~~al~~~~~~l-~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
|+++++..+++++ .++||+|+++.|+|+++... ++..|.+++.++.++++++.+|++++++.++++++++++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 79999999999999987643 566799999998764356778999999999888999999999
Q ss_pred CCCcccccCHHHHHHHHHHHH----hcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 192 GNPCGNVFTYQQLQKIAEKAR----KLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+||||.+++ +++|.++|+ ++|+++|+|++|+.. .....+. ..+..+++.|+||+ ..+|.++||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g----~~~~~~~---~~~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAG----SLPLDFS---RLEVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBT----TBCCCTT---TSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccC----CcCCChh---hcCCCEEEcccccc-ccCCCceEEEE
Confidence 999999988 888899999 999999999999852 2112222 22344888999995 35566799999
Q ss_pred eeCCCcchhHHHHHHHHhhh-----------------------cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHH
Q 014631 268 TSDPSGILQELRIVDSIKGY-----------------------LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRD 323 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 323 (421)
+++ ++++.+... ....++++...+.++.++++... ..++++..+++++
T Consensus 233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ 304 (390)
T ss_dssp ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 964 233333321 11124566677777766665422 2347888999999
Q ss_pred HHHHHHHHhhcCCCccccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631 324 TADICYDRIKEIPCITCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE 399 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~ 399 (421)
+++++.+.|++++++.+. .| ..+.++++.++.. .+..++...| .++||.+.+|. .++++|++++ .+
T Consensus 305 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~ 374 (390)
T 1elu_A 305 RSEFLWRGLNQLPHVHCL-ATSAPQAGLVSFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD 374 (390)
T ss_dssp HHHHHHHHHHHSTTEEES-CSSCCSSSEEEEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhcCCcEEe-cCccccccEEEEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence 999999999998888733 32 2344555577521 1456677766 67799999986 3579999986 89
Q ss_pred HHHHHHHHHHHHHH
Q 014631 400 PSALEEGLGRIKAF 413 (421)
Q Consensus 400 ~e~l~~~~~~l~~~ 413 (421)
++++++++++|+++
T Consensus 375 ~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 375 EEEINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998653
No 90
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=1.3e-34 Score=274.99 Aligned_cols=327 Identities=13% Similarity=0.083 Sum_probs=245.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CC---CCCC--CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AE---FDCY--SPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~y--~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
+..++||+.|.+ +++++++.+.+++.+.+.. +. ...| +...+..++|++++++++ + + +.++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~-~-~~i~~~ 106 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWLG------Y-S-RALLFI 106 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHT------C-S-EEEEES
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-C-cEEEeC
Confidence 567899998863 2345788999999998875 21 1123 445667899999999983 3 2 455555
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC---ceEEEEeCCCC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN---TVAMVIVNPGN 193 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~n 193 (421)
+|++++..+++++.++||.|+++.|+|..+...+...|.+++.+|. .|++++++.+++. ++++++++|+|
T Consensus 107 sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 107 SGFAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp CHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred CcHHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 5589999999999999999999999999999999999999888873 4788998887653 67788889999
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
|||.+++ +++|.++|++||+++|+||+|+.+.++ +.... ..++.. ..++++|+||+++.+| ||++++
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~-~di~~~s~sK~~~~~G---G~~~~~-- 248 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSC--WLQKVK-PELLVVTFGKGFGVSG---AAVLCS-- 248 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHH--HHTTCC-CSEEEEESSSTTSSCC---EEEEEC--
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchH--HhcCCC-CcEEEeeccchhhccC---cEEEeC--
Confidence 9999987 788999999999999999999876542 22211 222221 2388999999998766 999985
Q ss_pred CcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 272 SGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
+++++.+.... ..+.+++++.+.++.++++...+.+.++..++++++++++.+.|+++ ++. + .+..+.
T Consensus 249 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~ 319 (384)
T 1bs0_A 249 ------STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSA 319 (384)
T ss_dssp ------HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSS
T ss_pred ------HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCC
Confidence 35666665542 12235788888888877764222256788899999999999999987 777 4 245567
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
++|+.++... +..++...+ .++||.+.+|..|+. .+++|++++ ++++++++++++|+++
T Consensus 320 ~~~~~~~~~~-----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 320 IQPLIVGDNS-----RALQLAEKL-RQQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp BCCEEEESHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEEEeCCHH-----HHHHHHHHH-HHCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 7788775321 245666665 456999999987753 368999998 4899999999999864
No 91
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=1.5e-34 Score=275.30 Aligned_cols=332 Identities=12% Similarity=0.033 Sum_probs=244.4
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
+.+.|+.+.|. +.++.+.+++.+.+... ..+....++.++|+.++++++ +++++|++|+|+++++..
T Consensus 8 ~~~yl~~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~v~~t~g~t~a~~~ 74 (392)
T 2z9v_A 8 DPVITLTAGPV-----NAYPEVLRGLGRTVLYD--YDPAFQLLYEKVVDKAQKAMR------LSNKPVILHGEPVLGLEA 74 (392)
T ss_dssp CCSEECSSSCC-----CCCHHHHHHTTSCCCCT--TSHHHHHHHHHHHHHHHHHTT------CSSCCEEESSCTHHHHHH
T ss_pred CcceeecCCCc-----CCCHHHHHHHhcccccc--ccHHHHHHHHHHHHHHHHHhC------CCCCEEEEeCCchHHHHH
Confidence 44667666544 67788988887765431 111222345788888888873 457899999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhh--ccCceEEEEeCCCCCcccccC
Q 014631 125 ILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALA--DENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 125 ~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~--~~~~~~i~~~~p~nptG~~~~ 200 (421)
+++++.++||+|++++|+|+++ ...++..|.+++.++.+.+ +.+|++++++.+ .++++++++++|+||||.+++
T Consensus 75 ~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~ 152 (392)
T 2z9v_A 75 AAASLISPDDVVLNLASGVYGKGFGYWAKRYSPHLLEIEVPYN--EAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP 152 (392)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHHCSCEEEEECCTT--SCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC
T ss_pred HHHHhcCCCCEEEEecCCcccHHHHHHHHHcCCceEEeeCCCC--CCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc
Confidence 9999999999999999999875 3444567999999987543 458999999988 357889999999999999987
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+++|.++|++||+++|+|++|+.. .....+..++ ..+++.|+||+++ .+| +||++++ ++
T Consensus 153 ---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~sK~~~~~~g--~G~l~~~--------~~ 212 (392)
T 2z9v_A 153 ---IDAIGALVSAHGAYLIVDAVSSFG----GMKTHPEDCK---ADIYVTGPNKCLGAPPG--LTMMGVS--------ER 212 (392)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTTBT----TBSCCGGGGT---CSEEEECSSSTTCCCSC--CEEEEEC--------HH
T ss_pred ---HHHHHHHHHHcCCeEEEEcccccC----Cccccccccc---ceEEEecCcccccCCCc--eeEEEEC--------HH
Confidence 779999999999999999999852 2222233332 3478899999643 455 5999985 34
Q ss_pred HHHHHhhh---------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 280 IVDSIKGY---------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 280 ~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
+++.+... ....++++...+.++.++++......+++..++++++++++.+.|+++ ++
T Consensus 213 ~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~ 291 (392)
T 2z9v_A 213 AWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GL 291 (392)
T ss_dssp HHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CC
Confidence 55655421 111235566666666666654222337788899999999999999987 87
Q ss_pred cccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHH
Q 014631 339 TCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIK 411 (421)
Q Consensus 339 ~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~ 411 (421)
.+. .|. .+.++++.++.. .+..++...|.+++||.+.+|..+...+++|+++ + ++++++++++++|+
T Consensus 292 ~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~ 365 (392)
T 2z9v_A 292 SVW-AASDSIASPTTTAVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALG 365 (392)
T ss_dssp CBS-SSSGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred eec-cCCccccCCceEEEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHH
Confidence 733 423 356778877531 1466777776555599999998766678999995 4 79999999999999
Q ss_pred HHHHHhh
Q 014631 412 AFCQRHA 418 (421)
Q Consensus 412 ~~~~~~~ 418 (421)
++++++.
T Consensus 366 ~~~~~~~ 372 (392)
T 2z9v_A 366 GAMNAAG 372 (392)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 92
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=1.3e-34 Score=275.71 Aligned_cols=332 Identities=13% Similarity=0.062 Sum_probs=248.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--PSVGILPARRAIADYLNSELPCKLSPD-DVYLTAGCK 119 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~ 119 (421)
+...++++.|. ++.++.+.+++.+.+.. .|. +..+..++++.++++++ .+++ +|++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~g------~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLFQ------TNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHHT------CCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHhC------CCCCcEEEEcCcHH
Confidence 45667776663 36778888888765543 232 22456788888888873 4554 899999999
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCG 196 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG 196 (421)
+++..++.++.++||+|++++|+|+++ ...++..|.+++.++.++ ++.+|++++++.+++ ++++|++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999999999999999884 334566899999998754 346899999999887 889999999999999
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc-CCCCceEEEEEeeCCCcch
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~ 275 (421)
.+++ +++|.++|++||+++|+|++|+.. .....+.. .+..+++.|+||++ +++|+ ||++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~----~~~~~~~~---~~~d~~~~s~sK~l~g~~G~--G~~~~~------ 220 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASLG----GAPMFMDR---WEIDAMYTGSQKVLGAPPGI--TPVSFS------ 220 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTBT----TBCCCTTT---TTCSEEECCSSSTTCCCSSC--EEEEEC------
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCcchhh---cCccEEEECCCcccccCCCe--EEEEEC------
Confidence 9987 789999999999999999998752 21222222 23458889999974 45775 999985
Q ss_pred hHHHHHHHHhhhc------------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631 276 QELRIVDSIKGYL------------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 276 ~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
+++++.+.... ...++++...+.++.++++...+.++++..++++++++++.+.
T Consensus 221 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (393)
T 2huf_A 221 --HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG 298 (393)
T ss_dssp --HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred --HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 35666665431 0113556667776666776432335778888999999999999
Q ss_pred hhcCCCccccCCCC---ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHH
Q 014631 332 IKEIPCITCPRKPE---GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEE 405 (421)
Q Consensus 332 l~~~~g~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~ 405 (421)
|+++ |+.+. .|. .+.++++.++.. .+..++...|++++||.+.+|..+...+++|+++ + .+++++++
T Consensus 299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~ 371 (393)
T 2huf_A 299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR 371 (393)
T ss_dssp HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence 9988 87733 443 244777777521 1466777777666799999998776678999999 6 36889999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
++++|++++++++.
T Consensus 372 ~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 372 VLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999987754
No 93
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=4.6e-34 Score=274.84 Aligned_cols=336 Identities=16% Similarity=0.126 Sum_probs=248.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CC-CCCCCCCCC----CHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AE-FDCYSPSVG----ILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~y~~~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
|.++|||+.|++ .+++.++.+.+++.+++.. +. ...|....| ..++++.++++++ . ++.++++
T Consensus 63 g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~g------~--~~~i~~~ 131 (427)
T 2w8t_A 63 GKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFYG------T--TGAIVFS 131 (427)
T ss_dssp TEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHHT------C--SEEEEES
T ss_pred CceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHhC------C--CceEEec
Confidence 566889999963 2345789999999998876 21 122322333 4788888888873 2 2556666
Q ss_pred CHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----CceEEEEeCCC
Q 014631 117 GCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----NTVAMVIVNPG 192 (421)
Q Consensus 117 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----~~~~i~~~~p~ 192 (421)
+|++++..+++++.++||.|+++.|+|.++...++..|.+++.++. .|++++++.+.+ ++++|++++++
T Consensus 132 sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~~ 204 (427)
T 2w8t_A 132 TGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGVY 204 (427)
T ss_dssp CHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESEE
T ss_pred CcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCCC
Confidence 6777999999999999999999999999999999999999888763 488999988865 67889999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
||||.+++ +++|.++|++||+++|+||+|+.+.++.........++. .+.++++.||||+++++| ||+++++
T Consensus 205 n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~- 277 (427)
T 2w8t_A 205 SMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH- 277 (427)
T ss_dssp TTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC-
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH-
Confidence 99999987 889999999999999999999997765322211111221 234688999999998766 9999863
Q ss_pred CcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 272 SGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
++++.+.... ..+++.++..+.++.++++... ..++.+++++++++++.+.|+++ |+.+...+..+.
T Consensus 278 -------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~ 347 (427)
T 2w8t_A 278 -------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDSA 347 (427)
T ss_dssp -------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCSS
T ss_pred -------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCCC
Confidence 2444444431 1234567777777767776421 24677888999999999999987 777321332567
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++|+.++... ...++...| .++||.+.++..|+. .+++|++++ ++++++++++++|+++++++.+
T Consensus 348 ~~~~~~~~~~-----~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~ 417 (427)
T 2w8t_A 348 IVAVMLEDQE-----QAAMMWQAL-LDGGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGV 417 (427)
T ss_dssp EEEEEESSHH-----HHHHHHHHH-HHTTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEEECCHH-----HHHHHHHHH-HHCCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCc
Confidence 8888886321 245666666 456999999987754 358999998 5999999999999999987654
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.4e-34 Score=276.35 Aligned_cols=335 Identities=17% Similarity=0.127 Sum_probs=243.8
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcC
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE------FDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTA 116 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~ 116 (421)
|.++++|..++. .+++.+|.+.+++.+.+.... ...|+...+..++|++++++++ . +++|++++
T Consensus 45 g~~~i~~~~~~~---~~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDY---LGMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLHQ------K-EAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHTT------C-SEEEEESC
T ss_pred CCcEEEeeCCCc---ccCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHhC------C-CcEEEECC
Confidence 355678876652 123456789999999887521 1235555678899999999983 2 57888877
Q ss_pred CHHHHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----cCceEEEEeC
Q 014631 117 GCKQAIQVILTVLA--RPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----ENTVAMVIVN 190 (421)
Q Consensus 117 g~~~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~~~~~i~~~~ 190 (421)
|++ ++..++..+. ++||.|+++.|+|+++...++..|++++.++.+ |++++++.+. ++++++++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 766 7776666653 589999999999999999999999999888753 6778887765 5788999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
|+||||.+++ +++|.++|++||+++|+||+|+.+.++..+...+...+. ....++++||||.|+++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999987 789999999999999999999965443222111111221 123588899999998888 999885
Q ss_pred CCCcchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 270 DPSGILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++.+.+.... ....+.+++.+.++.++++.....++++.+++++++++++.+.|+++ |+. +..+.+
T Consensus 261 --------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 330 (401)
T 2bwn_A 261 --------ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS 330 (401)
T ss_dssp --------HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred --------HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence 34556554322 12223445777777777765333446788889999999999999987 777 435554
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCC---CeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMK---NWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+ ++|+.++... +..++...|++++||.+.|+..|+.+ +++|++++ ++++++++++++|+++++++
T Consensus 331 ~-~~~~~~~~~~-----~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 331 H-IVPVVIGDPV-----HTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp S-CEEEECCCHH-----HHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred C-eEEEEeCChH-----HHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 7888886311 24566666656789999998877543 58999998 68999999999999987653
No 95
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=2.7e-34 Score=276.30 Aligned_cols=334 Identities=16% Similarity=0.165 Sum_probs=244.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC----------CCCCHHHHHHHHHHHhhhCCCCCCCCc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP----------SVGILPARRAIADYLNSELPCKLSPDD 111 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~----------~~g~~~l~~~ia~~l~~~~~~~~~~~~ 111 (421)
.+.+.++|+.+.+. +.++.+.+++.+.+.......++. .....++++.+++++ ++++++
T Consensus 19 ~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~ 87 (423)
T 3lvm_A 19 AMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLV------GADPRE 87 (423)
T ss_dssp -CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTSCCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCCGGG
T ss_pred ccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcccccCCCccccchhHHHHHHHHHHHHHHHHHc------CCCCCe
Confidence 47888999988754 678999999988776111111111 122367788888877 356789
Q ss_pred EEEcCCHHHHHHHHHHHhcC----CCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhccCce
Q 014631 112 VYLTAGCKQAIQVILTVLAR----PGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV 184 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~ 184 (421)
|++|+|+++|+.++++++.+ +||+|+++.++|+++...+ ...|++++.++.++ ++.+|++++++.+.++++
T Consensus 88 v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~ 165 (423)
T 3lvm_A 88 IVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRDDTI 165 (423)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCTTEE
T ss_pred EEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCCCcE
Confidence 99999999999999998874 7999999999999987776 44599999998754 456899999999988899
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG 264 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 264 (421)
++++++|+||||.+++ +++|.++|++||+++|+|++|+... ....+..+ +..+++.|+||.++.+| +|
T Consensus 166 ~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~~~---~~di~~~s~sK~~g~~g--~G 233 (423)
T 3lvm_A 166 LVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGK----LPIDLSQL---KVDLMSFSGHKIYGPKG--IG 233 (423)
T ss_dssp EEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTT----SCCCTTTS---CCSEEEEESTTTTSCSS--CE
T ss_pred EEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCC----CCcChhhc---CCCEEEechHHhcCCCC--eE
Confidence 9999999999999988 7889999999999999999987632 11222222 23488899999877666 89
Q ss_pred EEEeeCCCcchhHHHHHHHHhhhc--------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 265 WLVTSDPSGILQELRIVDSIKGYL--------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
++++++.. .+.+.... ....+++...+.++..+++. ...++++..++++++++++.+.|+++|
T Consensus 234 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~ 304 (423)
T 3lvm_A 234 ALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRI-AKEEMATEMERLRGLRNRLWNGIKDIE 304 (423)
T ss_dssp EEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTST
T ss_pred EEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 99986421 12222221 12345667777777666653 234478889999999999999999988
Q ss_pred CccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEE
Q 014631 337 CITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRI 394 (421)
Q Consensus 337 g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi 394 (421)
++.+. .+.+ +.++++.++. .+..++...+ .+ |.+.+|..|.. .+++|+
T Consensus 305 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi 374 (423)
T 3lvm_A 305 EVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRF 374 (423)
T ss_dssp TEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTEEEE
T ss_pred CEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCceEEE
Confidence 88744 3332 2344555532 1455565544 54 88999877544 378999
Q ss_pred Eec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 395 TFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+++ .+++++++++++|+++++++++
T Consensus 375 ~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 375 SLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp ECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 998 6889999999999999988765
No 96
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=3.4e-34 Score=273.67 Aligned_cols=333 Identities=14% Similarity=0.124 Sum_probs=250.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc-CCC---CCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS-AEF---DCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.+..++||+.|.|- +++.++.+.+++.+.+.. +.. ..|. ...+..+++++++++++ .+ +.|++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~~-~~i~~- 111 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFLG------ME-DAILY- 111 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHHT------CS-EEEEE-
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHhC------CC-cEEEe-
Confidence 46789999998642 123689999999998875 211 1221 24557899999999983 33 45555
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEe
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIV 189 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~ 189 (421)
++|++++..++++++++||.|+++.|+|.++...+...|.+++.++. .|++++++.+++ ++++++++
T Consensus 112 ~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 112 SSCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp SCHHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred CChHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 55577999999999999999999999998888888889999888762 478888887764 68899999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc-cccc-CCCCcccccccCCCCCEEEEccccccc-CCCCceEEEE
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD-HLTF-GSTPYVRMGVFGSTVPVITLGSMSKRW-IVPGWRLGWL 266 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 266 (421)
+|+||||.+++ +++|.++|+++|+++|+||+|+ ++.. .+........+.. +..++++|+||+| +++| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999988 8999999999999999999996 6642 3433222222222 3458899999998 5554 999
Q ss_pred EeeCCCcchhHHHHHHHHhhhc--c-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC
Q 014631 267 VTSDPSGILQELRIVDSIKGYL--N-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK 343 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~ 343 (421)
+++ +++++.+.... . ...+++++.+.++.++++... ..++..++++++++++.+.|+++ ++. +.
T Consensus 258 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~- 324 (401)
T 1fc4_A 258 AAR--------KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVE--AGSELRDRLWANARQFREQMSAA-GFT-LA- 324 (401)
T ss_dssp EEC--------HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHH--TCHHHHHHHHHHHHHHHHHHHHT-TCC-BC-
T ss_pred EcC--------HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCc-cc-
Confidence 985 35666665543 1 234778888888888886421 14677888999999999999988 777 43
Q ss_pred CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 344 PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
|..++++|+.++... +..++...+ .++||.+.+|..|+. .+++|++++ ++++++++++++|+++++++.
T Consensus 325 ~~~~~~~~~~~~~~~-----~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 325 GADHAIIPVMLGDAV-----VAQKFAREL-QKEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp CSSSSEEEEEEECHH-----HHHHHHHHH-HHTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred CCCCCEEEEEcCChH-----HHHHHHHHH-HHCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 567788898886321 245566655 556999999987754 357999998 799999999999999998764
No 97
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.5e-35 Score=280.00 Aligned_cols=328 Identities=12% Similarity=0.104 Sum_probs=241.1
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHH-HHHHHhhhCCCCCCCCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRA-IADYLNSELPCKLSPDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~-ia~~l~~~~~~~~~~~~i~ 113 (421)
++.+++|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++++. ++++++ .+ +|+
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~~------~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFLG------CD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHTT------SS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHcC------CC--EEE
Confidence 5678889886533 3678999999998876531 1234566788999999 999984 33 999
Q ss_pred EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-----cCceEEEE
Q 014631 114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-----ENTVAMVI 188 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-----~~~~~i~~ 188 (421)
+|+|+++++..++++++++||+|++++|+|+++...+...|++++.++...+.++.+|++++++.++ ++++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~ 153 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALI 153 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEE
Confidence 9999999999999999999999999999999999999999999999982122346799999999887 67899999
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
++|+||||.+++ +++|.++|++||+++|+|++|+.+... .++..++. .++++|+||+++.+ .|+||+++
T Consensus 154 ~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~~~ 222 (371)
T 2e7j_A 154 TYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVMGM 222 (371)
T ss_dssp ESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEEEE
T ss_pred ECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEEEE
Confidence 999999999987 588899999999999999999985421 22333332 38899999987655 49999999
Q ss_pred eCCCcchhHHHHHHH-Hhhhcc---c-----ccCCchHHHHHHHHHhhccchhHHHHHHHHH--HHHHHHHHHHhhcCCC
Q 014631 269 SDPSGILQELRIVDS-IKGYLN---I-----SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL--RDTADICYDRIKEIPC 337 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~-~~~~~~---~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~g 337 (421)
++. +++. +..... . .++++...+.++..+++.... +..+++ +++++++.+.|+++ +
T Consensus 223 ~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~l~~~L~~~-~ 289 (371)
T 2e7j_A 223 KEE--------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRE----RIKRWDEEVEKARRFAAEMEKL-G 289 (371)
T ss_dssp CTT--------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHH----HGGGHHHHHHHHHHHHHHHHHT-T
T ss_pred ech--------hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHc-C
Confidence 742 3333 333221 1 335566666666666653111 556677 88889999999887 8
Q ss_pred ccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEE-EEec---CCHHHHHH
Q 014631 338 ITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLR-ITFA---IEPSALEE 405 (421)
Q Consensus 338 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iR-i~~~---~~~e~l~~ 405 (421)
+.+. .|. .+.++|+.++ +..++...+ .++||.+.| ..+.. ++++| ++++ ++++++++
T Consensus 290 ~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i~~ 358 (371)
T 2e7j_A 290 IKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEVDY 358 (371)
T ss_dssp CEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHHHH
T ss_pred cEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHHHH
Confidence 7733 443 3568888875 145566655 578999988 33322 57899 9998 58999999
Q ss_pred HHHHHHHHHHHh
Q 014631 406 GLGRIKAFCQRH 417 (421)
Q Consensus 406 ~~~~l~~~~~~~ 417 (421)
++++|+++++++
T Consensus 359 ~~~~l~~~~~~~ 370 (371)
T 2e7j_A 359 VLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHhc
Confidence 999999998764
No 98
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=4.5e-34 Score=272.38 Aligned_cols=321 Identities=11% Similarity=0.086 Sum_probs=242.2
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCC-cEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPD-DVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~-~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
+.++.+.+++.+.+.. .|.+. ....++|++++++++ .+++ +|++|+|+++++..++.+++++||+|+
T Consensus 28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~------~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl 97 (396)
T 2ch1_A 28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIFQ------TENRATMCVSGSAHAGMEAMLSNLLEEGDRVL 97 (396)
T ss_dssp CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHHT------CCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHhC------CCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence 5678888877654422 34332 236789999999983 5666 899999999999999999999999999
Q ss_pred EcCCCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+++|+|+++. ..++..|++++.++.+. ++.+|++++++.+++ ++++|++++|+||||.+++ +++|.++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 172 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH 172 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence 9999999884 47788899999998753 456899999999877 7899999999999999988 78899999999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY------- 287 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------- 287 (421)
|+++|+|++|+.. .....+..++ ..+++.|++|.++. +.++|++++++ ++++.+...
T Consensus 173 ~~~li~Dea~~~g----~~~~~~~~~~---~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~ 236 (396)
T 2ch1_A 173 DCLLIVDAVASLC----GVPFYMDKWE---IDAVYTGAQKVLGA-PPGITPISISP--------KALDVIRNRRTKSKVF 236 (396)
T ss_dssp TCEEEEECTTTBT----TBCCCTTTTT---CCEEECCCC-CCCC-CSSCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred CCEEEEEcccccc----CCccchhhcC---cCEEEEcCCccccC-CCCeEEEEECH--------HHHHhhhhccCcccce
Confidence 9999999999842 2222222222 23667899997543 34569998852 455554321
Q ss_pred -----------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce---
Q 014631 288 -----------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS--- 347 (421)
Q Consensus 288 -----------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~--- 347 (421)
....++++...+.++.++++...+.++++..++++++++++.+.|+++ |+. +..+.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~ 314 (396)
T 2ch1_A 237 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLD-IFVKDPRHRL 314 (396)
T ss_dssp GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCC-BSSCSGGGBC
T ss_pred EechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCe-eccCCccccC
Confidence 112245677788888888865334567888999999999999999987 877 4355442
Q ss_pred -eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 348 -MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.++++.++.. .+..++...|++++||.+.+|..+..++++|+++ + .+++++++++++|+++++++..
T Consensus 315 ~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 315 PTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp TTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred CceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 3677777531 2466777777666799999987666678999999 4 4889999999999999987653
No 99
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=9e-34 Score=268.87 Aligned_cols=332 Identities=15% Similarity=0.094 Sum_probs=243.9
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CC-CCCC----CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FD-CYSP----SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~-~y~~----~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
+.|+.+.+. +.++.+++++.+.+.... .+ .|.. ...+.++++.+++++ +.++++|++|+|++
T Consensus 2 ~yld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t 70 (382)
T 4eb5_A 2 AYFDYTSAK-----PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGAT 70 (382)
T ss_dssp CBCBTTTCC-----CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHH
T ss_pred eeeccCCCC-----CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchH
Confidence 345555533 678999999999987521 11 1321 134577888888887 35678999999999
Q ss_pred HHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCC
Q 014631 120 QAIQVILTVLA----RPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 120 ~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
+++.+++.++. ++||+|++++|+|+++...+. ..|++++.++++. ++.+|++++++.++++++++++++|+
T Consensus 71 ~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 148 (382)
T 4eb5_A 71 EANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHAN 148 (382)
T ss_dssp HHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBC
T ss_pred HHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccC
Confidence 99999999987 899999999999998866664 3689999998753 45689999999998888999999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
||||.+++ +++|.++|++||++ |+|++|+. |.....+..++ ..+++.|+||.++.+| +|++++++..
T Consensus 149 nptG~~~~---l~~i~~l~~~~~~~-i~D~a~~~----g~~~~~~~~~~---~di~~~s~sK~~g~~g--~G~~~~~~~~ 215 (382)
T 4eb5_A 149 NEIGTIQP---VEEISEVLAGKAAL-HIDATASV----GQIEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEA 215 (382)
T ss_dssp TTTCBBCC---HHHHHHHHTTSSEE-EEECTTTB----TTBCCCHHHHT---CSEEEEETGGGTCCSS--CEEEEEETTC
T ss_pred CCccccCC---HHHHHHHHHHCCCE-EEEcchhc----CCcccCccccC---CCEEEeehHHhcCCCc--eEEEEEcccc
Confidence 99999987 67899999999999 99999984 22112222222 3488899999977666 7999987532
Q ss_pred cchhHHHHHHHHhh----hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--
Q 014631 273 GILQELRIVDSIKG----YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG-- 346 (421)
Q Consensus 273 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~-- 346 (421)
. +...+.. .....++++...+.++..+++.. ..++++.+++++++++++.+.|+++|++.+. .+.+
T Consensus 216 ~------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~ 287 (382)
T 4eb5_A 216 K------LQPVILGGGQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKR 287 (382)
T ss_dssp C------CCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSB
T ss_pred c------cCceecCCCccccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccC
Confidence 0 1000000 11122456666666666666542 3467888899999999999999998888733 4432
Q ss_pred -eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHH
Q 014631 347 -SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALE 404 (421)
Q Consensus 347 -~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~ 404 (421)
+.++++.++. .+..++...+ .++||.+.+|..|.. .+++|++++ +++++++
T Consensus 288 ~~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~ 360 (382)
T 4eb5_A 288 LPNNVNVRFSY------IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVD 360 (382)
T ss_dssp CTTEEEEEETT------SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHH
T ss_pred CCCEEEEEeCC------cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHH
Confidence 4466777652 1456677665 568999999875422 478999998 6899999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
+++++|+++++++++
T Consensus 361 ~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 361 RLLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988764
No 100
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=1.1e-33 Score=268.18 Aligned_cols=333 Identities=14% Similarity=0.080 Sum_probs=237.3
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---------CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---------VGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---------~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
|+|+.+.+. ++++.+.+++.+.+.+.. .++.. ..+.++++.+++++ | +++++|++|+|
T Consensus 2 iyld~~~~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~----~--~~~~~i~~~~g 68 (382)
T 4hvk_A 2 AYFDYTSAK-----PVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV----N--GGGGTVVFTSG 68 (382)
T ss_dssp CBCBTTTCC-----CCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT----T--CTTEEEEEESS
T ss_pred EeecCCCcC-----CCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc----C--CCcCeEEEECC
Confidence 455555433 677899999999987621 12111 11235666666665 3 56788999999
Q ss_pred HHHHHHHHHHHhc----CCCCeEEEcCCCCcchHHHHhh---cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 118 CKQAIQVILTVLA----RPGANILLPKPGFPLYEANARH---TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l~----~~gd~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
+++++..+++++. ++||+|+++.++|+++...+.. .|++++.++.+. ++.+|++++++.++++++++++++
T Consensus 69 ~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~ 146 (382)
T 4hvk_A 69 ATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQH 146 (382)
T ss_dssp HHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCS
T ss_pred chHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccCC--CCCcCHHHHHHHhccCceEEEEEC
Confidence 9999999999987 8999999999999988765544 699999998753 456899999999988999999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
|+||||.+++ +++|.++|++||+ +|+|++|+... ....+...+ ..+++.|+||.++.+| +|++++++
T Consensus 147 ~~nptG~~~~---~~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~ 213 (382)
T 4hvk_A 147 ANNEIGTIQP---VEEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRK 213 (382)
T ss_dssp BCTTTCBBCC---HHHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEET
T ss_pred CCCCceeeCC---HHHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcC
Confidence 9999999977 7788999999999 99999987522 112222222 2388899999876666 78888764
Q ss_pred CCcchhHHHHHHHH-hhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc---
Q 014631 271 PSGILQELRIVDSI-KGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--- 346 (421)
Q Consensus 271 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--- 346 (421)
..... ...... ........+++...+.++..++.. ...++++..++++++++++.+.|+++|++.+. .+.+
T Consensus 214 ~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~ 288 (382)
T 4hvk_A 214 EAKLQ---PVILGGGQENGLRSGSENVPSIVGFGKAAEI-TAMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRL 288 (382)
T ss_dssp TCCCC---CSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBC
T ss_pred ccCcC---cccccCCCcCccccCCcCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccC
Confidence 32110 000000 001111345567777777777653 34677889999999999999999998888733 4432
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEec--CCHHHHHH
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITFA--IEPSALEE 405 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~~--~~~e~l~~ 405 (421)
+.++++.++. .+..++...| .++||.+.+|..|.. .+++|++++ ++++++++
T Consensus 289 ~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~ 361 (382)
T 4hvk_A 289 PNNVNVRFSY------IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDR 361 (382)
T ss_dssp TTEEEEEETT------CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHH
T ss_pred CCEEEEEECC------CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHH
Confidence 2355555542 1456666554 677999999976643 478999998 68999999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
++++|+++++++++
T Consensus 362 ~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 362 LLEVLPGVIERLRS 375 (382)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 101
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=4.1e-34 Score=275.39 Aligned_cols=348 Identities=14% Similarity=0.113 Sum_probs=240.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.+..++||..|.+....+ .+++.+.+++.+++..... ..|.+..+..++++++++++. + . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTG-HLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccC-CCCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 367788998776432223 2678899999999875321 145667778899999999973 2 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCeEEEcCCCCcchHH-HHhhcCce-------------eEeeeccC---CCCccCCHHHHHhhh
Q 014631 120 QAIQVILT---VLARPGANILLPKPGFPLYEA-NARHTRLE-------------IRHFDLLP---EKGWEVDLDGLEALA 179 (421)
Q Consensus 120 ~al~~~~~---~l~~~gd~Vl~~~p~y~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~d~e~l~~~~ 179 (421)
+++..+++ .+.++| +|++.+|+|+++.. .....|.+ ++.++.+. ..++.+|++++++.+
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 667776 89999999987653 44444532 55566532 113457899999887
Q ss_pred c-----cCceEEEEe-CCCCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631 180 D-----ENTVAMVIV-NPGNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252 (421)
Q Consensus 180 ~-----~~~~~i~~~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 252 (421)
+ ++++++++. +++| || ..+|.+++++|.++|++||+++|+||+|+++.+.|... .+...+.. +.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~---~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVA---PDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSC---CSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCC---CCEEEE
Confidence 5 344555442 3467 99 78899999999999999999999999999876655422 22222211 224499
Q ss_pred ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631 253 SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 253 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
||+|+. |+|+||++++ +++++.+.... ..+.+++++.+.++.++|+...+. +..++++++++.+.+.
T Consensus 267 sK~~~~-GlriG~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~~---~~~~~~~~~~~~l~~~ 334 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGR--------AEVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQE---NLLQKANDLGQKLKDG 334 (426)
T ss_dssp CGGGGT-SSCCEEEEEE--------HHHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHHT---THHHHHHHHHHHHHHH
T ss_pred cccccC-CCceEEEEEc--------HHHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHH
Confidence 999986 9999999996 35666555422 234567888999888777642221 3345566666666666
Q ss_pred hhc----CCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631 332 IKE----IPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA 402 (421)
Q Consensus 332 l~~----~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~ 402 (421)
|++ ++.+. ...+. |+++|+.++.... +...+..++...+ .++||.+.||..+ ++++|++++ .++++
T Consensus 335 l~~~~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~v~~~~~~--~~~iRi~~~~~~~~~~ 409 (426)
T 1sff_A 335 LLAIAEKHPEIG-DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQ 409 (426)
T ss_dssp HHHHHHTCTTEE-EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHH-HHTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhCCCeE-EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHH-HHCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence 654 33333 21344 7789998853100 0001244566665 4679999998764 579999986 78999
Q ss_pred HHHHHHHHHHHHHHhh
Q 014631 403 LEEGLGRIKAFCQRHA 418 (421)
Q Consensus 403 l~~~~~~l~~~~~~~~ 418 (421)
+++++++|++++++++
T Consensus 410 i~~~~~~l~~~l~~~~ 425 (426)
T 1sff_A 410 IRQGLEIISQCFDEAK 425 (426)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 102
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=9.9e-34 Score=265.59 Aligned_cols=317 Identities=15% Similarity=0.146 Sum_probs=236.1
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
++++.+.+++.+.+... ..+....++.++|+.++++++ ++++++++|+|+++++..++.++.++||+|++++
T Consensus 11 ~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~la~~~g------~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~ 82 (352)
T 1iug_A 11 RLHPKALEALARPQLHH--RTEAAREVFLKARGLLREAFR------TEGEVLILTGSGTLAMEALVKNLFAPGERVLVPV 82 (352)
T ss_dssp CCCHHHHHHHHSCCCCT--TSHHHHHHHHHHHHHHHHHHT------CSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCHHHHHHhccCCCCc--cCHHHHHHHHHHHHHHHHHhC------CCCceEEEcCchHHHHHHHHHhccCCCCeEEEEe
Confidence 67889999988766431 111122346789999999883 5578999999999999999999999999999999
Q ss_pred CCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--Cc
Q 014631 141 PGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GI 216 (421)
Q Consensus 141 p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~ 216 (421)
|+|+++. ..+...|.+++.++.+. ++.+|++++++ ++++++++++|+||||.+++ +++|.++|++| |+
T Consensus 83 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~~ 154 (352)
T 1iug_A 83 YGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPEG 154 (352)
T ss_dssp CSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTTC
T ss_pred CCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCCC
Confidence 9999865 44566899999998754 34578888877 57889999999999999977 78899999999 99
Q ss_pred EEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH---------H---
Q 014631 217 MVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS---------I--- 284 (421)
Q Consensus 217 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~---------~--- 284 (421)
++|+|++|+.. .....+..++ ..+++.|+||+++.+ .++||+++++ ++.+. +
T Consensus 155 ~li~D~a~~~~----~~~~~~~~~~---~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~~~ 218 (352)
T 1iug_A 155 LVGADMVTSLL----VGEVALEAMG---VDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLARE 218 (352)
T ss_dssp EEEEECTTTBT----TBCCCSGGGT---CSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHHHH
T ss_pred EEEEECCcccc----CcceeccccC---eeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHHHH
Confidence 99999999742 2111222222 347789999954332 3489999853 23322 1
Q ss_pred -hhh--cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC-ceeEEEEecCccccc
Q 014631 285 -KGY--LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE-GSMFVMVKLNLSLLE 360 (421)
Q Consensus 285 -~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~-~~~~~~~~~~~~~~~ 360 (421)
... ....++++...+.++.++++... .++++.+++++++++++.+.|+++ |+. +..|. .+.++|+.++..
T Consensus 219 ~~~~~~~~~~~~~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~--- 292 (352)
T 1iug_A 219 LKAQKEGESAWTPAINLVLAVAAVLEEVL-PRLEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG--- 292 (352)
T ss_dssp HHHHTTTCCSSCCCHHHHHHHHHHHHHHG-GGHHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT---
T ss_pred HhhcccCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC---
Confidence 111 12234677777777777776422 237888899999999999999987 887 43553 567888888631
Q ss_pred CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 361 GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 361 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+..++...+ .++||.+.+|..+...+++|++++ ++++++++++++|+++++++.
T Consensus 293 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 293 --VPYARVKEAF-AQRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp --CCHHHHHHHH-HTTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred --CCHHHHHHHH-HHCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 1466777766 456999999885545689999998 579999999999999988764
No 103
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=2.1e-32 Score=260.91 Aligned_cols=317 Identities=14% Similarity=0.105 Sum_probs=230.7
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHHHHHHh---c-CCCCCCCCCCCCH---HHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAVVDAVR---S-AEFDCYSPSVGIL---PARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~y~~~~g~~---~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..+++.|.|. ++.++.+.+++.+.++ . .....|+. .|.+ +++++++++++ . +++++++|+
T Consensus 20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~g------~--~~~i~~~~g 86 (404)
T 1e5e_A 20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLEK------T--EACVATSSG 86 (404)
T ss_dssp CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHHT------C--SEEEEESSH
T ss_pred CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHhC------C--CcEEEeCCh
Confidence 3467888876 3444444444444443 2 22345765 5556 89999999983 2 367788888
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
++++..++.+++++||+|+++.|.|.++.. .++..|.+++.++.+ |++++++.++++++++++++|+||
T Consensus 87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Np 159 (404)
T 1e5e_A 87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANP 159 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCC
Confidence 899999999999999999999999999877 678889999888753 778999999888999999999999
Q ss_pred cccccCHHHHHHHHHHHHh-cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCC
Q 014631 195 CGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPS 272 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~ 272 (421)
||.+++ +++|+++|++ +|+++|+|++|+.+.+. .++ .+ +..+++.|+||+|+++|.|+ ||+++++
T Consensus 160 tG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~-- 226 (404)
T 1e5e_A 160 TLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA-- 226 (404)
T ss_dssp TCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--
T ss_pred CCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--
Confidence 999985 8999999999 99999999999987643 122 22 34588999999999999998 9999863
Q ss_pred cchhHHHHHH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-------------
Q 014631 273 GILQELRIVD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP------------- 336 (421)
Q Consensus 273 ~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~------------- 336 (421)
++++ .+...... ..+.+++.+.++..+++. ...+.++..++.+.+.+.+++.+
T Consensus 227 ------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~ 295 (404)
T 1e5e_A 227 ------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDH 295 (404)
T ss_dssp ------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSS
T ss_pred ------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 4555 67665543 346788888888777764 23334444555555566665443
Q ss_pred -CccccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----------------------
Q 014631 337 -CITCPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM----------------------- 388 (421)
Q Consensus 337 -g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----------------------- 388 (421)
++.+. .+ .++++.| +++. ..+.+..++++.|| +.+|..|+.
T Consensus 296 p~~~~~-~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 364 (404)
T 1e5e_A 296 EGHDIA-KKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREA 364 (404)
T ss_dssp TTHHHH-HHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred ccHHHH-HhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHh
Confidence 22211 12 2555555 7752 33445667788899 556654441
Q ss_pred ----CCeEEEEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 389 ----KNWLRITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 389 ----~~~iRi~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++++|+|++. |+++++++.|++++++..+
T Consensus 365 ~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~ 397 (404)
T 1e5e_A 365 AGITDGMIRLSVGI--EDADELIADFKQGLDALLR 397 (404)
T ss_dssp TTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHH
Confidence 4789999998 8889999999988876543
No 104
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2.3e-33 Score=268.44 Aligned_cols=327 Identities=12% Similarity=0.088 Sum_probs=242.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
+.++|+.+.+. +.++.+.+++.+.+..... ..|. ...+..++++.+++++ ++++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 47888888754 5678999999998875211 1232 2344678999999988 356789999999
Q ss_pred HHHHHHHHHHHh---cCCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 118 CKQAIQVILTVL---ARPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l---~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
+++++.+++.++ .++||+|+++.|+|+++...+.. .|.+++.++++++ ++.+|++++++.+++++++|++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999887 78999999999999987555443 6999999987633 456899999999988899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEE-EEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLG-WLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~ 269 (421)
|+||||.+++ +++|.++|+++|+++|+|++|+.. ....++..++ ..+++.|+||+++ ++ +| |++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAP----YRLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTT----TCCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccC----CCCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999987 788899999999999999999852 2212232333 3478899999864 44 89 99885
Q ss_pred CCCcchhHHHHHHHHhhhcc----------cccCCchHHHHHHHHHhhccch--------------hHHHHHHHHHHHHH
Q 014631 270 DPSGILQELRIVDSIKGYLN----------ISSGPATFVQGAVPQIFKNTKE--------------DFFSKIVDILRDTA 325 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~ 325 (421)
+++.+.+..... ..++++...+.++.++++.... .++++..+++++++
T Consensus 241 --------~~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 3cai_A 241 --------PSVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF 312 (406)
T ss_dssp --------HHHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred --------hHHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence 346665544321 1245666666565555543211 15788889999999
Q ss_pred HHHHHHhhcCCCccccCCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------CCCC---CCeEEE
Q 014631 326 DICYDRIKEIPCITCPRKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------AVGM---KNWLRI 394 (421)
Q Consensus 326 ~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~---~~~iRi 394 (421)
+++.+.|+++|++. +..|. .+.++++.++.. +..++...| .++||.+.+|. .++. .+++|+
T Consensus 313 ~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iRi 384 (406)
T 3cai_A 313 DYLMVSLRSLPLVM-LIGRPEAQIPVVSFAVHKV------PADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVTV 384 (406)
T ss_dssp HHHHHHHHTCTTEE-ECCCCSSBCSEEEEEETTB------CHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEEE
T ss_pred HHHHHHHhcCCCeE-EcCCccccCCEEEEEECCc------CHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEEE
Confidence 99999999988887 33443 233677776521 456666665 66899999987 2332 478999
Q ss_pred Eec--CCHHHHHHHHHHHHH
Q 014631 395 TFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l~~ 412 (421)
+++ ++++++++++++|++
T Consensus 385 s~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 385 GLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp ECCTTCCHHHHHHHHHHHHT
T ss_pred EeecCCCHHHHHHHHHHHHH
Confidence 998 589999999999875
No 105
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=7.1e-33 Score=265.23 Aligned_cols=331 Identities=12% Similarity=0.092 Sum_probs=243.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--C----CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--F----DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~----~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
.|.+++||+.+++ .+++.++.+.+++.+++.+.. . ..|+......++++.++++++ . +..+++
T Consensus 57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g------~--~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTG------F--DECLLS 125 (409)
T ss_dssp CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHT------C--SEEEEE
T ss_pred CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhC------C--CeEEEe
Confidence 4778999987753 346678999999999987621 1 122333446789999999873 2 234555
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNP 194 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~np 194 (421)
++|++++..++.+++++||.|+++.|+|.++...+...|.+++.++. .|++++++.+.+ +++++++++|+||
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np 198 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST 198 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 66679999999999999999999999999999999999999887764 489999998865 4788999999999
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccccccC--CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG--STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
||.+++ +++|+++|++||+++|+||+|+.+.++ |.......... .+..+++.|+||+|+++| ||+++++.
T Consensus 199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~-~~~di~~~s~sK~~~~~g---g~v~~~~~- 270 (409)
T 3kki_A 199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLT-REVHFMTASLAKTFAYRA---GAIWCNNE- 270 (409)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCG-GGCSEEEEESSSTTCSSC---EEEEESSS-
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCC-CCCCEEEeecchhhCCCc---eEEEECHH-
Confidence 999987 889999999999999999999885443 33222211221 123488899999987664 99988642
Q ss_pred cchhHHHHHHHHhhhc---ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 273 GILQELRIVDSIKGYL---NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
+++.+.... ....+.++..+.++.++++.. ...++.+++++++++++.+.|+++ ++. + . ..+++
T Consensus 271 -------~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~-~~~~~ 337 (409)
T 3kki_A 271 -------VNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I-R-SESQI 337 (409)
T ss_dssp -------GGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C-C-CSSSE
T ss_pred -------HHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-C-CCCCE
Confidence 233332221 122345666777777777642 122677888999999999999988 777 3 2 46778
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC---CCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM---KNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|+.++... +..++...|+ ++||.+.++..+.. .+++|++++ ++++++++++++|++++++.
T Consensus 338 ~~~~~~~~~-----~~~~~~~~L~-~~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 338 IGLETGDER-----NTEKVRDYLE-SNGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp EEEEEESHH-----HHHHHHHHHH-HTTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCHH-----HHHHHHHHHH-HCCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 888886421 2445666664 55999988665422 468999997 68999999999999998763
No 106
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=6.8e-33 Score=264.04 Aligned_cols=320 Identities=13% Similarity=0.059 Sum_probs=235.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC--------
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP-------- 132 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-------- 132 (421)
++++.+.+++.+.+.... ..+....+..++++.+++++.+.+| .++++|++|+|+++++..++.++.++
T Consensus 41 ~~~~~v~~a~~~~~~~~~-~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNL-GDPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCTHHHHHHHHHTTCCT-TSGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHhhcC-CCcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 456788999998876531 1222222345666667777766665 56789999999999999999998765
Q ss_pred -----CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHH
Q 014631 133 -----GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQK 206 (421)
Q Consensus 133 -----gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~ 206 (421)
||+|+++.|+|+++...++..|.+++.++.++ ++.+|++++++.+.+ +++++++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 99999999999999999999999999998754 467899999999988 8999999999999999965 888
Q ss_pred HHHHHHhcCcEEEEcccccccccCCCCc--------ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 207 IAEKARKLGIMVISDEVYDHLTFGSTPY--------VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
|.++|++||+++|+||+|+.+.+..... .++ .+.. +..+++.|+||+ +.+|.|+|+++++++.
T Consensus 193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------ 263 (397)
T 3f9t_A 193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------ 263 (397)
T ss_dssp HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred HHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence 9999999999999999998765321110 011 1111 234778899998 4677899999986532
Q ss_pred HHHHHHhhhcccc---------c---CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 279 RIVDSIKGYLNIS---------S---GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 279 ~~~~~~~~~~~~~---------~---~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+.+.+....... + +.+...+.++...+. ..++++..++++++++++.+.|+++ ++..+ .+..
T Consensus 264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 337 (397)
T 3f9t_A 264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI 337 (397)
T ss_dssp -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence 223222111110 1 123444555544443 4667888889999999999999988 87744 4455
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
+.++++.++ +..++...+ .++||.+.+|.. ++++|++++ ++++++++++++|+++++
T Consensus 338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 667777665 245666655 566999999864 589999998 689999999999998864
No 107
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=2.2e-33 Score=266.36 Aligned_cols=319 Identities=13% Similarity=0.130 Sum_probs=237.1
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP--DDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
.+.++.+.+++.+.+.... .+.....+.++++.++++++ .++ ++|++|+|+++++. ++..++++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~~------~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVMG------ASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHHT------CCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHhC------CCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 3677888888776543210 11112335677777777773 444 88999999999999 8988999999999
Q ss_pred EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+++++|++ +...+...|.+++.++++. ++.+|++++++.+.+ +++++++++|+||||.+++ +++|.++|++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence 99999976 5666788899999998764 346899999999877 7899999999999999987 78899999999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH----------
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI---------- 284 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~---------- 284 (421)
|+++|+|++|+.... ...+... +..+++.|+||+++. +.++|++++++ ++++.+
T Consensus 157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~~-~~g~g~~~~~~--------~~~~~~~~~~~~~~~~ 220 (384)
T 3zrp_A 157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALGS-AAGLGLLLLSP--------KALSILDSQNSIAGYY 220 (384)
T ss_dssp EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTCC-CSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred CCEEEEECcccccCc----ccccccc---CCCEEEecCcccccC-CCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence 999999999986321 1122222 234888999998642 34489999863 344444
Q ss_pred ---hhh----------c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----c
Q 014631 285 ---KGY----------L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----G 346 (421)
Q Consensus 285 ---~~~----------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~ 346 (421)
... . ..+++++...+.++..+++.....++++..++++++++++.+.|+++ ++. +..+. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~ 298 (384)
T 3zrp_A 221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLE-IVARRPESYS 298 (384)
T ss_dssp TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSCSSGGGBC
T ss_pred ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCe-EccCcccccC
Confidence 111 1 11136676777777677764334457888999999999999999988 887 43444 4
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+.++++.++. .+..++...+ .++||.+.+|..+.. +++|++++ ++++++++++++|++++++++
T Consensus 299 ~~~~~~~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 299 NTVTGVILKV------ADPQKVLAGT-VNEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSEEEEECSS------SCHHHHHHHH-HTTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEECCC------CCHHHHHHHH-HHCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 6677788764 1466777766 456999999874433 89999987 789999999999999998765
No 108
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=1.2e-33 Score=265.47 Aligned_cols=330 Identities=11% Similarity=0.124 Sum_probs=230.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
.+.+|||+.+.+. ++++.+.+++.+.+.. ....|++.....++++.+++++ | .+.+|++|+|+++++
T Consensus 6 ~~~~id~~~~~~~-----~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNIA-----GASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGGC-----CCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCcc-----CCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 5678999987543 5678999999887532 1235654444456666666665 3 245699999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHHH--Hhhc--CceeEeeeccCCCCccCCHHHHHh-hhcc-------CceEEEEeC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEAN--ARHT--RLEIRHFDLLPEKGWEVDLDGLEA-LADE-------NTVAMVIVN 190 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~~--~~~~--g~~~~~~~~~~~~~~~~d~e~l~~-~~~~-------~~~~i~~~~ 190 (421)
..++.++.++||+|+++.|+|.+.... +... |.+++.++.+ ++.+|++++++ .+.+ ++++|++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999999876554 5666 9898888763 35789999999 8875 578889999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
|+| ||.++|.+++++|.++|++||+++|+|++|..+.. .+.....+ .++.... +++.|+||+ +. ...+||+++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~ 224 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF 224 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence 987 99999999999999999999999999999976421 12211111 1111112 345589998 44 233447776
Q ss_pred eCCCcchhHHHHHHHHhhhccc---ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 269 SDPSGILQELRIVDSIKGYLNI---SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
++ ++++.+...... ..........++...++ +..+.+..++++++++++.+.|++++|+.+. .|.
T Consensus 225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~ 292 (356)
T 1v72_A 225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLT---DDLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGT 292 (356)
T ss_dssp SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCC
T ss_pred CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCC
Confidence 42 233443332211 11112222322333443 2345556778889999999999988888843 577
Q ss_pred ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 346 GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+++++|+.++ .+++..+ .++||.+.||. |+ ++++|++++ ++++++++++++|++++++.+
T Consensus 293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 7888998774 2566665 56799999987 55 789999987 689999999999999877653
No 109
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=6.4e-33 Score=265.68 Aligned_cols=320 Identities=13% Similarity=0.054 Sum_probs=238.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCc-EEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDD-VYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~-i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
++++.+.+++.+.+ ...|.+. ....++++.++++++ .++++ +++++|+++++..++.+++++||+|+
T Consensus 23 ~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~~------~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl 92 (411)
T 3nnk_A 23 NADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVFR------TENRWTMLVDGTSRAGIEAILVSAIRPGDKVL 92 (411)
T ss_dssp CCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHHT------CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHhC------CCCCcEEEECCCcHHHHHHHHHHhcCCCCEEE
Confidence 56788888776543 1222211 123566666666663 34444 78899999999999999999999999
Q ss_pred EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+++|+|++ +...++..|.+++.++.+ .++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++|
T Consensus 93 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 167 (411)
T 3nnk_A 93 VPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQP---LAELGEICRRY 167 (411)
T ss_dssp EEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHH
T ss_pred EecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcceecc---HHHHHHHHHHc
Confidence 99999987 888888999999999874 3456899999999876 8999999999999999976 77899999999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc------
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL------ 288 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~------ 288 (421)
|+++|+|++|+... ....+... +..+++.|+||+++ ++.++|+++++ +++.+.+....
T Consensus 168 ~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l~-~~~g~g~~~~~--------~~~~~~~~~~~~~~~~~ 231 (411)
T 3nnk_A 168 DALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCLG-GPSGTSPITLS--------ARMEEAIRRRKCVEEGI 231 (411)
T ss_dssp TCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTTC-CCSSEEEEEEC--------HHHHHHHHTTCCCCGGG
T ss_pred CCEEEEECCcccCC----cccchhcc---CCcEEEecCccccC-CCCceEEEEEC--------HHHHHHHhhcccccccc
Confidence 99999999987622 11222222 23488899999743 33458999985 35666655432
Q ss_pred -------------------------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 289 -------------------------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 289 -------------------------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
...++++...+.++.++++...+.++++..++++++++++.+.|+++ +
T Consensus 232 ~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g 310 (411)
T 3nnk_A 232 RTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIARHKLHGDALVKGIQAM-G 310 (411)
T ss_dssp CCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred cccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 11235677777777777764333447888999999999999999987 7
Q ss_pred ccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHH
Q 014631 338 ITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIK 411 (421)
Q Consensus 338 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~ 411 (421)
+.+. .+.+ +.++++.++.. .+..++...+++++||.+.+|.....++++|+++ + ++++++++++++|+
T Consensus 311 ~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~ 384 (411)
T 3nnk_A 311 LETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGTMGYNARKDCVMTTLSALE 384 (411)
T ss_dssp CCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHH
T ss_pred CEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeCccCcCCHHHHHHHHHHHH
Confidence 7733 4443 56777777532 2466777777666799999986555578999998 5 47999999999999
Q ss_pred HHHHHhh
Q 014631 412 AFCQRHA 418 (421)
Q Consensus 412 ~~~~~~~ 418 (421)
++++++.
T Consensus 385 ~~l~~~~ 391 (411)
T 3nnk_A 385 AVLNYLK 391 (411)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 9998764
No 110
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=2.8e-33 Score=263.19 Aligned_cols=332 Identities=12% Similarity=0.081 Sum_probs=236.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
.+.+++|+.+.+. ++++.+.+++.+.+. .|....|..++++.+++++.+.+| .++++|++|+|+++++
T Consensus 12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 4668999986533 578899999998875 355556677888888888888776 5678999999999999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchHH--HHhhcCceeEeeeccCCCCccCCHHHHHhhhccC-------ceEEEEeCCCC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYEA--NARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN-------TVAMVIVNPGN 193 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~~--~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~-------~~~i~~~~p~n 193 (421)
..+++.+.++||+|++++|+|+++.. .++..|.+++.++.+ ++.+|++++++.++++ ++++++++| |
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999999999999999999998877 477889999988863 5679999999988765 788889998 7
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCC-CCCEEEEcccccccCCCCceEEEEEeeCCC
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGS-TVPVITLGSMSKRWIVPGWRLGWLVTSDPS 272 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 272 (421)
|||.++|.+++++|.++|++||+++|+||+|.++.++..+. ....+.. ....++..|++|. +.+ .++|++++++
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~-- 230 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND-- 230 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence 99999999999999999999999999999995543221111 1111000 0112667789998 443 4579998853
Q ss_pred cchhHHHHHHHHhhh---cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 273 GILQELRIVDSIKGY---LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 273 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
++++.+... .......+.....++..+++. ..+++..++++++++++.+.| +.+++. +..|.++++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~ 299 (359)
T 1svv_A 231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ 299 (359)
T ss_dssp ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence 122222221 111111122222233344543 456778889999999999999 556888 446778888
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|+.++ .++...+++++||.+.+. ....++++|++++ ++++++++++++|++++++.
T Consensus 300 ~~~~~~----------~~~~~~l~~~~gi~v~~~-~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 300 LFPILE----------NTMIAELNNDFDMYTVEP-LKDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ECBEEE----------HHHHHHHTTTEECEEEEE-ETTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred EEEEcC----------HHHHHHHHHhcCEEEEec-ccCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 887663 356666655559998331 1123568999986 68999999999999987653
No 111
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=3e-33 Score=266.26 Aligned_cols=323 Identities=12% Similarity=0.054 Sum_probs=238.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~ 138 (421)
+.++.+.+++.+.+.. .+.+ .....++++.++++++ .. .+++|++|+|+++++..+++++.++||+|++
T Consensus 33 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~~----~~-~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~ 103 (393)
T 3kgw_A 33 NLAPRVLAAGSLRMIG----HMQKEMLQIMEEIKQGIQYVFQ----TR-NPLTLVVSGSGHCAMETALFNLLEPGDSFLT 103 (393)
T ss_dssp CCCHHHHHHTTCCCCC----TTSHHHHHHHHHHHHHHHHHHT----CC-CSEEEEESCCTTTHHHHHHHHHCCTTCEEEE
T ss_pred CCCHHHHHHhcccccC----cccHHHHHHHHHHHHHHHHHhC----CC-CCcEEEEeCCcHHHHHHHHHhcCCCCCEEEE
Confidence 5778888887653321 2211 1224566777777763 11 2346999999999999999999999999999
Q ss_pred cCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 139 PKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 139 ~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
+.++|++ +...+...|.+++.++.+.+ +.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++||
T Consensus 104 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~ 178 (393)
T 3kgw_A 104 GTNGIWGMRAAEIADRIGARVHQMIKKPG--EHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHRYQ 178 (393)
T ss_dssp EESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHTT
T ss_pred EeCCchhHHHHHHHHHcCCceEEEeCCCC--CCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHHcC
Confidence 9988864 36777888999999987543 35899999999987 8999999999999999987 778999999999
Q ss_pred cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc------
Q 014631 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN------ 289 (421)
Q Consensus 216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------ 289 (421)
+++|+|++|+... ....+... +..+++.|+||+++. +.++|+++++ +++++.+.....
T Consensus 179 ~~li~De~~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~-~~g~g~~~~~--------~~~~~~~~~~~~~~~~~~ 242 (393)
T 3kgw_A 179 CLLLVDSVASLGG----VPIYMDQQ---GIDIMYSSSQKVLNA-PPGISLISFN--------DKAKYKVYSRKTKPVSFY 242 (393)
T ss_dssp CEEEEECTTTTTT----SCCCTTTT---TCCEEEEESSSTTCC-CSSCEEEEEC--------HHHHHHHHTCSSCCSCST
T ss_pred CEEEEECCccccC----cccchhhc---CCCEEEecCcccccC-CCceeEEEEC--------HHHHHHHhccCCCCCcee
Confidence 9999999998521 11122222 234778899997632 2348999985 356666654221
Q ss_pred ------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc----e
Q 014631 290 ------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG----S 347 (421)
Q Consensus 290 ------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~----~ 347 (421)
..++++...+.++.++++...+.++++..++++++++++.+.|+++ ++.+. .+.. +
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~ 320 (393)
T 3kgw_A 243 TDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIRLP 320 (393)
T ss_dssp TCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCS
T ss_pred ecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhcCC
Confidence 1235677777777777764334567888999999999999999988 77732 2332 4
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.+.++.++.. .+..++...+++++||.+.+|..+..++++|+++ + .+++++++++++|+++++++.++
T Consensus 321 ~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 321 TITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp SEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred eEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 5667777532 1466777777666699999998776788999998 6 48999999999999999987654
No 112
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.5e-33 Score=264.41 Aligned_cols=318 Identities=14% Similarity=0.063 Sum_probs=235.9
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL 138 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~ 138 (421)
.+.++.+.+++.+.+.. +.|. ...+..++++.++++++ ...+++++++|+|+++++..+++.+.+ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALFD----PGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHHC----CCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHhC----CCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 36788898888776543 2232 12346788888888873 233468899999999999999998876 89999
Q ss_pred cCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 139 PKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 139 ~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
++++|+++ ...++..|.+++.++.++ ++.+|++++++.+++ +++++++++|+||||.+++ +++|.++|++||
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999874 455677899999998754 456899999999887 7899999999999999987 678899999999
Q ss_pred cEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHHHHHhh--------
Q 014631 216 IMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIVDSIKG-------- 286 (421)
Q Consensus 216 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~~~~-------- 286 (421)
+++|+|++|+... ...++..++. .+++.|++|+++ .+| +||+++++ ++++.+..
T Consensus 155 ~~li~D~a~~~~~----~~~~~~~~~~---d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~ 217 (353)
T 2yrr_A 155 ALFFLDAVTTLGM----LPFSMRAMGV---DYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL 217 (353)
T ss_dssp CEEEEECTTTTTT----SCCCHHHHTC---SEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred CeEEEEcCccccc----ccccccccCc---eEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence 9999999996422 1223333332 377889999643 355 79999863 45554431
Q ss_pred --------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC--ceeEEEEecCc
Q 014631 287 --------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE--GSMFVMVKLNL 356 (421)
Q Consensus 287 --------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~--~~~~~~~~~~~ 356 (421)
.....++++...+.++.++++...+.++++.+++++++++++.+.|+++ |+.+. .+. .++++|+.++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 295 (353)
T 2yrr_A 218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE 295 (353)
T ss_dssp HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence 1122346677777777777764333447788899999999999999987 88733 443 45666787753
Q ss_pred ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH-HHHHHHHHHHHH
Q 014631 357 SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE-EGLGRIKAFCQR 416 (421)
Q Consensus 357 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~-~~~~~l~~~~~~ 416 (421)
. .+..++...+ .++||.+.+|..|..++++|++++ .++++++ +++++|++++++
T Consensus 296 ~-----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 296 G-----VDADRLVRAL-YAEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp T-----CCHHHHHHHH-HHTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred C-----CCHHHHHHHH-HHCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 1 1456677666 556999999987766789999994 7888888 999999998753
No 113
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3.2e-33 Score=264.49 Aligned_cols=327 Identities=13% Similarity=0.168 Sum_probs=238.3
Q ss_pred CCCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcC--CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSA--EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.+..++||+.|.|.. .+. +++.+.+++.+.+... ....| +..+..++++.+++++ | . ++++++|+|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y-~~~~~~~l~~~la~~~----g--~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLY-ENPWQEELAHKLVKHF----W--T-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTB-CCHHHHHHHHHHHHTS----S--S-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCccc-CCHHHHHHHHHHHhhc----C--C-CCeEEEeCch
Confidence 467899999987642 234 7899999999998753 12346 3456678888888886 2 3 4899999999
Q ss_pred HHHHHHHHHH---hc---CCC-CeEEEcCCCCcchHHHHhhcCceeE----eeeccCCCCcc----CCHHHHHhhhccCc
Q 014631 119 KQAIQVILTV---LA---RPG-ANILLPKPGFPLYEANARHTRLEIR----HFDLLPEKGWE----VDLDGLEALADENT 183 (421)
Q Consensus 119 ~~al~~~~~~---l~---~~g-d~Vl~~~p~y~~~~~~~~~~g~~~~----~~~~~~~~~~~----~d~e~l~~~~~~~~ 183 (421)
++++..+++. +. ++| |+|++++|+|+++...+...+.... ..+.. .++. .|++++++.+++++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~~l~~~l~~~~ 173 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLV--PGFSYAKLNDIDSVYKLLDEET 173 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCC--SSEEEECTTCHHHHHTTCCTTE
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCC--CCceeCCCchHHHHHHHhcCCe
Confidence 9999999875 35 788 9999999999988665554432211 01111 0111 48999999998888
Q ss_pred eEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
+++++++|+||||.++ +.+++++|.++|++||+++|+||+|+++...+... ++..++...+++ ||||.++ +|+|
T Consensus 174 ~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~-~g~~ 248 (375)
T 2eh6_A 174 AGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG-GGVP 248 (375)
T ss_dssp EEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG-TTSC
T ss_pred EEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc-CCCC
Confidence 9998988899999984 68889999999999999999999999765444322 333333222333 7889987 6999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
+||++++ +++++.+.... ..+.+.+++.+.++.++|+.. ++..++++++++++.+.|++++. . .
T Consensus 249 ~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~~-~-~ 313 (375)
T 2eh6_A 249 IGAILAR--------EEVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELGK-G-K 313 (375)
T ss_dssp CEEEEEE--------HHHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTTS-S-E
T ss_pred eEEEEEc--------HHHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhc-C-C
Confidence 9999986 34666555421 123356778888877777641 16677888899999999988743 2 2
Q ss_pred CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 342 RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.+..++++|+.++. +..+++..+ .++||.+.|+. .+++|++++ .+++++++++++|+++
T Consensus 314 -~~~~g~~~~~~~~~-------~~~~~~~~l-~~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 314 -VKGRGLMLGLELER-------ECKDYVLKA-LEKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp -EEEETTEEEEECSS-------CCHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred -ceEEEEEEEEEEcC-------cHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 24457788988863 245677666 46899999863 578999986 7899999999999876
No 114
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=7.1e-33 Score=264.96 Aligned_cols=341 Identities=16% Similarity=0.205 Sum_probs=240.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.+..++||..|.+..+.+ ..++.+.+++.+++.+... ..| +.....++++.+++++ | .+++++|+|++
T Consensus 37 ~g~~~lD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~----~~~v~~~~gg~ 106 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALG-HAHPELREALNEQASKFWHTGNGY-TNEPVLRLAKKLIDAT----F----ADRVFFCNSGA 106 (406)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTS-CCHHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred CCCEEEECCCchhhcccC-CCCHHHHHHHHHHHHhcccccCCc-CCHHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence 477899999885433333 3688999999999876311 122 2222345555555554 3 45999999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCceeEee-eccC-CCCcc----CCHHHHHhhhccCceE
Q 014631 120 QAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRLEIRHF-DLLP-EKGWE----VDLDGLEALADENTVA 185 (421)
Q Consensus 120 ~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~-~~~~-~~~~~----~d~e~l~~~~~~~~~~ 185 (421)
+|+..+++.+.. +| |+|++.+|+|+++...+...+...... ...+ ..++. .|++++++.+++++++
T Consensus 107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~ 186 (406)
T 4adb_A 107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCA 186 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEE
Confidence 999999998864 66 999999999999865555444321110 0000 00111 3899999999888888
Q ss_pred EEEeCCCCCccccc--CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 186 MVIVNPGNPCGNVF--TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 186 i~~~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
++++ |+||||.++ +.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+++ ||||.++ +|+|+
T Consensus 187 v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~-~G~r~ 260 (406)
T 4adb_A 187 VIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKALG-GGFPV 260 (406)
T ss_dssp EEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-TTSCC
T ss_pred EEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhhc-CCCCe
Confidence 8777 999999988 99999999999999999999999999877666543 222333333344 6799988 89999
Q ss_pred EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCc
Q 014631 264 GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCI 338 (421)
Q Consensus 264 G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~ 338 (421)
||++++ +++++.+..... .+.+++++.+.++.++++.... ++..++++++++++.+.|+++ +.+
T Consensus 261 G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 329 (406)
T 4adb_A 261 GALLAT--------EECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINHRYGLF 329 (406)
T ss_dssp EEEEEC--------HHHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred EEEEEc--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 999985 457776665532 3457888999998888864222 566677778888888877754 122
Q ss_pred cccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 339 TCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
. . .+..+.++++.++... ..+..++...+ .++||.+.|+. .+++|++++ .+++++++++++|++++++
T Consensus 330 ~-~-~~~~g~~~~~~~~~~~---~~~~~~~~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~ 399 (406)
T 4adb_A 330 S-E-VRGLGLLIGCVLNADY---AGQAKQISQEA-AKAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFAAACEH 399 (406)
T ss_dssp E-E-EEEETTEEEEEECTTT---TTCHHHHHHHH-HHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred e-E-EEEEEEEEEEEEeCCc---HHHHHHHHHHH-HHCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1 1 1234678888886421 01356677665 55699999864 589999765 7999999999999999988
Q ss_pred hhh
Q 014631 417 HAK 419 (421)
Q Consensus 417 ~~~ 419 (421)
+.+
T Consensus 400 ~~~ 402 (406)
T 4adb_A 400 FVS 402 (406)
T ss_dssp HHC
T ss_pred HHh
Confidence 764
No 115
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=8.9e-33 Score=260.35 Aligned_cols=331 Identities=12% Similarity=0.108 Sum_probs=241.8
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
++++|+.| |. +.++.+.+++.+.+. +.|+. ..+..++|+.++++++. +.+++++++|+|+++++
T Consensus 4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g~----~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALATA----SEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHCS----SSSEEEEEEESCHHHHH
T ss_pred ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhCC----CCcCcEEEEecChHHHH
Confidence 36889888 43 477889888876421 22321 16678999999999841 22345799999999999
Q ss_pred HHHHHHhcCCCCeEEEcC-CCCcc-hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEEeCCCCCcccc
Q 014631 123 QVILTVLARPGANILLPK-PGFPL-YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~-p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~~~p~nptG~~ 198 (421)
..+++++.++||+|++.+ +.|.. +...+...|.+++.++.+. .+.+|++++++.+++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988776 55543 5567788899999998753 456899999998865 47888899999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
++ +++|.++|++||+++|+|++|+.+.. ...+... +..+++.|+||+++. +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~-------- 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE-------- 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence 87 78999999999999999999986332 1122222 234889999998633 23479999963
Q ss_pred HHHHHHhhhc-------------------ccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcCCCc
Q 014631 279 RIVDSIKGYL-------------------NISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEIPCI 338 (421)
Q Consensus 279 ~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~g~ 338 (421)
++++.+.... ....+++...+.++.++++...... +++..++++++++++.+.|+++ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~ 287 (366)
T 1m32_A 209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF 287 (366)
T ss_dssp HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3444433210 0013667777777777776432222 6788899999999999999987 77
Q ss_pred cccCCC---CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 339 TCPRKP---EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 339 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.+. .+ ..++++|+.++... ..+..++...+ .++||.+.+|..| ..+++|++++ ++++++++++++|+++
T Consensus 288 ~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l-~~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 288 NTL-LDDELHSPIITAFYSPEDP---QYRFSEFYRRL-KEQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp CBS-SCGGGBCSSEEEEECCCCT---TCCHHHHHHHH-HHTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred eec-cCchhcCceEEEEEcCccC---CCCHHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 733 33 35668888886310 11456677666 4569999999877 4679999998 5899999999999988
Q ss_pred HHHh
Q 014631 414 CQRH 417 (421)
Q Consensus 414 ~~~~ 417 (421)
++++
T Consensus 362 ~~~~ 365 (366)
T 1m32_A 362 MYWT 365 (366)
T ss_dssp CTTC
T ss_pred HHhc
Confidence 7543
No 116
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=1.7e-32 Score=263.21 Aligned_cols=320 Identities=13% Similarity=0.079 Sum_probs=233.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEE-EcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVY-LTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~-~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
+.++.+.+++.+ .....|.+ .....++++.+++++ | .+++.++ +++|+++++..++.++.++||+|+
T Consensus 21 ~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl 90 (416)
T 3isl_A 21 EVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF----Q--TKNRWAYPIDGTSRAGIEAVLASVIEPEDDVL 90 (416)
T ss_dssp CCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT----T--CCCSEEEEEESCHHHHHHHHHHHHCCTTCEEE
T ss_pred CcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh----C--CCCCcEEEecCcHHHHHHHHHHHhcCCCCEEE
Confidence 456777666544 22223322 122345566666655 3 4566665 889999999999999999999999
Q ss_pred EcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+++|+|++ +...++..|.+++.++++.+ +.+|++++++.++ ++++++++++|+||||..++ +++|.++|++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 165 (416)
T 3isl_A 91 IPIYGRFGYLLTEIAERYGANVHMLECEWG--TVFDPEDIIREIKKVKPKIVAMVHGETSTGRIHP---LKAIGEACRTE 165 (416)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCTT--CCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CHHHHHHHHHT
T ss_pred EecCCcccHHHHHHHHhcCCeeEEEecCCC--CCCCHHHHHHHHhhCCCcEEEEEccCCCCceecC---HHHHHHHHHHc
Confidence 99999998 67788889999999997643 4689999999987 58899999999999999977 78899999999
Q ss_pred CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY------- 287 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~------- 287 (421)
|+++|+|++|+... ....+... +..+++.|+||+++ ++.++|+++++ +++.+.+...
T Consensus 166 ~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~l~-g~~g~g~~~~~--------~~~~~~~~~~~~~~~Gw 229 (416)
T 3isl_A 166 DALFIVDAVATIGG----CEVKVDEW---KIDAAIGGTQKCLS-VPSGMAPITYN--------ERVADVIAARKKVERGI 229 (416)
T ss_dssp TCEEEEECTTTTTT----SCCCTTTT---TCSEEECCSSSTTC-CCSSEEEEEEC--------HHHHHHHHTC-------
T ss_pred CCEEEEECCccccC----CCcchhhc---CCCEEEecCccccC-CCCCeEEEEEC--------HHHHHHhhccccccccc
Confidence 99999999997532 11122222 23488999999732 33458999985 3455555421
Q ss_pred --------------------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC
Q 014631 288 --------------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 288 --------------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
....++++...+.++.++++......+++..++++++++++.+.|++.
T Consensus 230 ~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~ 309 (416)
T 3isl_A 230 ATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRFERHRHHEAALAAGIKAM 309 (416)
T ss_dssp -----------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 111335677777777777764333347889999999999999999986
Q ss_pred CCccccCCCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH-HHHHHHH
Q 014631 336 PCITCPRKPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA-LEEGLGR 409 (421)
Q Consensus 336 ~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~-l~~~~~~ 409 (421)
++. +..+.+ +.++++.++.. .+..++...|++++||.+.+|.....++++|++++ .++++ +++++++
T Consensus 310 -g~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~ 382 (416)
T 3isl_A 310 -GLR-LFGDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIGTMGYSCRKENVLFVLAG 382 (416)
T ss_dssp -TCC-BCSCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEECCGGGCSHHHHHHHHHH
T ss_pred -CCE-eccCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEecccCCCcHHHHHHHHHH
Confidence 887 334443 45777777532 24677877776666999999886556789999994 45555 9999999
Q ss_pred HHHHHHHhh
Q 014631 410 IKAFCQRHA 418 (421)
Q Consensus 410 l~~~~~~~~ 418 (421)
|+++++++.
T Consensus 383 l~~~~~~~~ 391 (416)
T 3isl_A 383 LEAVLLRHN 391 (416)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHcC
Confidence 999998764
No 117
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=2.1e-33 Score=267.92 Aligned_cols=333 Identities=13% Similarity=0.143 Sum_probs=233.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.+..++||+.+......+ +.++.+.+++.+++..... +.. ....++++.+++.+.+.+| ++++++|+|+++|
T Consensus 38 ~g~~~ld~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a 109 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLG-HSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA 109 (397)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred CCCEEEECCccccccccC-CCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 367889998773221222 3678999999999876321 111 1112444455555544443 5799999999999
Q ss_pred HHHHHHHhcC------CC-CeEEEcCCCCcchHH-HHhhcCce------------eEeeeccCCCCccCCHHHHHhhhcc
Q 014631 122 IQVILTVLAR------PG-ANILLPKPGFPLYEA-NARHTRLE------------IRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 122 l~~~~~~l~~------~g-d~Vl~~~p~y~~~~~-~~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
+..+++++.. +| +.|++.+|+|++... .+...|.+ +..++. .|++++++.+++
T Consensus 110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~ 182 (397)
T 2ord_A 110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE 182 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence 9999988753 54 789999999977544 66666665 444443 289999999988
Q ss_pred CceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 182 NTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
+++++++++|+||||. +++.+++++|+++|++||+++|+||+|+++.+.|.. .++..++...+++ ||||.++ +|
T Consensus 183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G 257 (397)
T 2ord_A 183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG 257 (397)
T ss_dssp TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence 8999999999999999 899999999999999999999999999987665542 2222333222233 7899987 89
Q ss_pred ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC-Cc
Q 014631 261 WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP-CI 338 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 338 (421)
+|+||+++++. +. .+.... ..+.+++++.+.++.++|+...+ ++..++++++++++.+.|++++ ++
T Consensus 258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (397)
T 2ord_A 258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEY 325 (397)
T ss_dssp SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998642 33 333211 22346788888888888865222 3566777788888888887541 12
Q ss_pred ccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 339 TCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 339 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
..+ ..+..|.++|+.++.. .+..++...+ .++||.+.||. ++++|++++ .+++++++++++|+++++
T Consensus 326 ~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l-~~~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 326 DVVADVRGMGLMIGIQFREE-----VSNREVATKC-FENKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp TTEEEEEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeEEEEEEECCh-----HHHHHHHHHH-HHCCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 211 0123456788887632 1356677666 45899999973 578999975 789999999999999876
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
+
T Consensus 396 ~ 396 (397)
T 2ord_A 396 G 396 (397)
T ss_dssp T
T ss_pred h
Confidence 4
No 118
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=1.5e-32 Score=264.75 Aligned_cols=356 Identities=13% Similarity=0.090 Sum_probs=228.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..+.+....+ ..+|.+++++.+++++. ..|.+..+..+.++++++++.+.++ .++++|++|+|++++
T Consensus 27 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIG-HGRAEVGERMAAQAARL--PFVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA 101 (430)
T ss_dssp TSCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHC--CCCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhc--ccccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 478899999875443333 34899999999998763 2343334455677777777776665 456799999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc---------------eeEeeeccCC-CCccCCHHHHHh
Q 014631 122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL---------------EIRHFDLLPE-KGWEVDLDGLEA 177 (421)
Q Consensus 122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~---------------~~~~~~~~~~-~~~~~d~e~l~~ 177 (421)
+..+++.+.+ +++.|++.+|+|+++...+...+. ++..++.+.. .....|++++++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 9999988763 468999999999988765554443 2222222110 001235688888
Q ss_pred hhcc---CceEEEEeCC-CC-Cccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc-CCCCCEEEEc
Q 014631 178 LADE---NTVAMVIVNP-GN-PCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF-GSTVPVITLG 250 (421)
Q Consensus 178 ~~~~---~~~~i~~~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 250 (421)
.+.. +..++++++| +| ++|. .++.+++++|.++|++||+++|+||+|+++.+.|... .+..+ +...++ .
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~-~~~~~~~~~~di---~ 257 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPL-ALSRWSGVTPDI---A 257 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTTCCCSE---E
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhhhhcCCCCcE---E
Confidence 7762 4455666677 56 7886 5678889999999999999999999999987666532 23333 322223 3
Q ss_pred ccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHH
Q 014631 251 SMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRD 323 (421)
Q Consensus 251 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~ 323 (421)
+|||.++ +| +|+||++++ +++++.+... ...+.+.+++++.++.++|+... +...++.++..+.
T Consensus 258 t~sK~l~-~G~~r~G~~~~~--------~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 328 (430)
T 3i4j_A 258 VLGKGLA-AGYAPLAGLLAA--------PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ 328 (430)
T ss_dssp EECGGGT-TTSSCCEEEEEC--------HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEccccc-CCccccEEEEEC--------HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 6899987 49 999999985 4677877753 22345788999999988887422 2344455555555
Q ss_pred HHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC----CCChHHHHHHHHhhcCeeEEeCCCC--C-CCCeEEEEe
Q 014631 324 TADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG----ISDDMEFALQLAKEESVIVLPGMAV--G-MKNWLRITF 396 (421)
Q Consensus 324 ~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gv~v~~g~~~--~-~~~~iRi~~ 396 (421)
.++.+.+.+.++|++..+ .+ .|.|+++.+....... .....++...+ .++||.+.|+..+ + ..+++|+++
T Consensus 329 ~~~~l~~~~~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~~~~iRi~~ 405 (430)
T 3i4j_A 329 LLAGLQALQARFPQMMQV-RG-TGLLLGVVLGDLATGQAFETPGIASRIGAAA-LKRGLITYPGSGAEPNGRGDHLLLGP 405 (430)
T ss_dssp HHHHHHHHHHHCTTEEEE-EE-ETTEEEEEEC------------CHHHHHHHH-HHTTEECC-----------CEEEECC
T ss_pred HHHHHHHHHHhCCCeEEE-EE-EEEEEEEEeccccccCCCccHHHHHHHHHHH-HhCCCEEEecccccCCCCCCEEEEEC
Confidence 555666655566666522 33 3567777775211000 01124566555 5779999997432 1 157899999
Q ss_pred c--CCHHHHHHHHHHHHHHHHHhh
Q 014631 397 A--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+ .+++++++++++|+++++++.
T Consensus 406 ~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 406 PLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 8 789999999999999998753
No 119
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=3.6e-32 Score=257.36 Aligned_cols=331 Identities=12% Similarity=0.101 Sum_probs=231.0
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
..++|+-|. .+.++.+.+++.+.+.. .+.+ ...++.+.+.+++.+.+|.+.+.+.+++|+|++++++.
T Consensus 19 ~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~ 86 (376)
T 3f0h_A 19 GMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEA 86 (376)
T ss_dssp SCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHH
T ss_pred CceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHH
Confidence 445565553 36788888888765422 2221 22345555555555555543323455669999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCcchH--HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 125 ILTVLARPGANILLPKPGFPLYE--ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 125 ~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
++++++++||+|++++|.|++.. ..+...|.+++.++.+ .++.+|++++++.++++++++++++|+||||.+++
T Consensus 87 ~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~-- 162 (376)
T 3f0h_A 87 VVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD-- 162 (376)
T ss_dssp HHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC--
T ss_pred HHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC--
Confidence 99999999999999999887653 3467779999888875 34678999999988888999999999999999988
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++|.++|++||+++|+|++|+.+... ..+...+ ..+++.|+||+++ .+| +|+++++ +++.
T Consensus 163 -l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~--------~~~~ 224 (376)
T 3f0h_A 163 -TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECG---ADVMITGSQKVLACPPG--ISVIVLA--------PRGV 224 (376)
T ss_dssp -HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEETTTTTCCCSS--CEEEEEC--------HHHH
T ss_pred -HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccC---ccEEEecCcccccCCCc--eEEEEEC--------HHHH
Confidence 899999999999999999999874321 1222222 2377889999987 556 6777775 3566
Q ss_pred HHHhhhcc------------------cccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 282 DSIKGYLN------------------ISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 282 ~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
+.+..... ...+++...+.++.++++...+. ++++..++++++++++.+.|+++ ++.+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~- 302 (376)
T 3f0h_A 225 ERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV- 302 (376)
T ss_dssp HHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC-
T ss_pred HHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC-
Confidence 65553211 12244444445555555532233 57888999999999999999987 66632
Q ss_pred CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 343 KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
.+.....++...+.. .+..++...+.+++||.+.+|.....++++|++++ ++++++++++++|++++++
T Consensus 303 ~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 303 SESPANGVTSVHPTT-----ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp CSSBBTTEEEEEESS-----SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred ccccCceEEEEeCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 333232222212211 24667777776555999999865445789999996 6899999999999998864
No 120
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=2.9e-32 Score=263.87 Aligned_cols=357 Identities=15% Similarity=0.109 Sum_probs=238.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|.+....+ ..+|.+.+++.+++.+. ..|....+..+.+..+++++.+.++.. .+++|++|+||++|
T Consensus 62 ~G~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA 137 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTTVG-ASHPAVAAAIADQATHF--THTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA 137 (453)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHHHC--SCCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred CCCEEEEcCCCcccCcCC-CCCHHHHHHHHHHHHhc--cccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence 367889998875442222 45899999999998874 234444445577777777777665421 35799999999999
Q ss_pred HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccC--CCCccCC--------HHHH
Q 014631 122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLP--EKGWEVD--------LDGL 175 (421)
Q Consensus 122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~--~~~~~~d--------~e~l 175 (421)
++.+++.+.. .+++|++.+++|+++...+...+. .+..++.+. .+.++.+ ++.+
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 9999987653 458999999999988665544322 234444321 1222233 4566
Q ss_pred HhhhccCceEEEEeCCCCCcc--cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631 176 EALADENTVAMVIVNPGNPCG--NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS 253 (421)
Q Consensus 176 ~~~~~~~~~~i~~~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 253 (421)
++.+.+++.++++++|.|++| ...+++.+++|.++|++||+++|+||+|+++.+.|... ....++.... +.|||
T Consensus 218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~~pd---i~t~s 293 (453)
T 4ffc_A 218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGIVPD---IVTMA 293 (453)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCCCcc---hHhhh
Confidence 666666677788889977776 44577889999999999999999999999887666422 2222222222 34789
Q ss_pred cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHH
Q 014631 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~ 331 (421)
|.++. |+|+||++++ +++++.+..... .+.+.+++++.++.++|+... +...++.++.....++.+.+.
T Consensus 294 K~~~~-G~~~G~~~~~--------~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~ 364 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGR--------AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSAL 364 (453)
T ss_dssp GGGGT-TSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcC-CcCeEEEEEC--------HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99866 8999999986 457766655432 355788999999988887422 233344444444445555555
Q ss_pred hhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 332 IKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 332 l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
+.++|.+..+ +..|.++|+.+..... +.......+... +.++||.+.|+..+ .+.+|++++ .+++++++++
T Consensus 365 ~~~~~~~~~~--~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l 439 (453)
T 4ffc_A 365 AEEVDIIGEV--RGRGAMLAIEIVKPGTLEPDAALTKSIAAE-ALSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGI 439 (453)
T ss_dssp HHHCSSEEEE--EEETTEEEEEEBCTTSCCBCHHHHHHHHHH-HHHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred HhhCCCeEEE--EeeceEEEEEEecCcccCCCHHHHHHHHHH-HHhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 5556655422 3346688887743100 000013345554 46679999997654 468999876 6899999999
Q ss_pred HHHHHHHHHhhhc
Q 014631 408 GRIKAFCQRHAKQ 420 (421)
Q Consensus 408 ~~l~~~~~~~~~~ 420 (421)
++|+++++++.++
T Consensus 440 ~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 440 TALSDIIRAKASH 452 (453)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhc
Confidence 9999999887654
No 121
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=3.3e-32 Score=256.96 Aligned_cols=330 Identities=14% Similarity=0.075 Sum_probs=227.0
Q ss_pred CC-CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 43 PR-PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~-~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
|. +++|++.+.+. .+.++.+.+++. .|.. ...+++.+++++.+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~~----~~~~~~v~~a~~---------~~~~---~~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSGG----FLIDEKDKALLN---------TYIG---SSYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCCC----CCCCHHHHHHHT---------STTH---HHHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCCC----CCCCHHHHHHHH---------HhcC---chHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 55 78999988754 478899988885 1211 1355566666665555532 35789999999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceE-EEEeCCCCCccc
Q 014631 122 IQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVA-MVIVNPGNPCGN 197 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~-i~~~~p~nptG~ 197 (421)
+..++.++ +||+|+++.|+|+++.. .+...|++++.+ .|++++++. ++++++ +++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999998877543 667789888776 278899888 778899 889999999996
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEcccccccccC-CCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFG-STPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 276 (421)
+..++++|.++|++||+++|+|++|+.+..+ ......+ ..+ ..++++|+||++ +|+|+||++++
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~---~di~~~S~sK~l--~g~~~G~~~~~------- 221 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPAL-KLG---ADLVVTSTDKLM--EGPRGGLLAGK------- 221 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHH-HHT---CSEEEEETTSSS--SSCSCEEEEEE-------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCcc-ccC---CcEEEecCcccc--cCcceEEEEEC-------
Confidence 5689999999999999999999999876310 0000011 122 237889999984 56899999986
Q ss_pred HHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH----HHHHHHHhhcC---CCccccCCCCcee
Q 014631 277 ELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT----ADICYDRIKEI---PCITCPRKPEGSM 348 (421)
Q Consensus 277 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~----~~~~~~~l~~~---~g~~~~~~~~~~~ 348 (421)
+++++.+...... ..+++++.+.++..+++......+++..+..+.. ++.+.+.|..+ +|+.+...|.+.+
T Consensus 222 -~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~ 300 (374)
T 2aeu_A 222 -KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFV 300 (374)
T ss_dssp -HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEE
T ss_pred -HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEE
Confidence 3577777665432 3357788888888888753222233333223233 45566666554 3555223556555
Q ss_pred EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEEecC-C--HHHHHHHHHHHHHHHHHhhh
Q 014631 349 FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRITFAI-E--PSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~~~~-~--~e~l~~~~~~l~~~~~~~~~ 419 (421)
+.|..++.... ..++.+++.++++++||.+.||..|. ..+++||+++. + +++++++++.|+++++++.+
T Consensus 301 ~~~~~~~~~~~--~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 301 IKRVYKDDTIN--IKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp EEEEESSHHHH--HHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred EEeeccccccc--ccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 55544431100 00112366677788899999998763 35689999973 2 33588999999998887654
No 122
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=3.3e-32 Score=261.25 Aligned_cols=339 Identities=14% Similarity=0.145 Sum_probs=229.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+..++||..|.+....++..++.+++++.++++... .|++..+..+++..+++.+.+.+|... +++|++|+|+++++
T Consensus 41 g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea~ 117 (419)
T 2eo5_A 41 GNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEAI 117 (419)
T ss_dssp SCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHHH
T ss_pred CCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHHH
Confidence 677899988875432222227999999999987642 232222223444555555555555332 78999999999999
Q ss_pred HHHHHHhcC-CCCeEEEcCCCCcchHHHHh-hcC-------------ceeEeeeccCC--CCcc------------CCHH
Q 014631 123 QVILTVLAR-PGANILLPKPGFPLYEANAR-HTR-------------LEIRHFDLLPE--KGWE------------VDLD 173 (421)
Q Consensus 123 ~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~-~~g-------------~~~~~~~~~~~--~~~~------------~d~e 173 (421)
+.+++.+.. +||+|++.+|+|+++...+. ..| .+++.++.+.. .+|+ +|++
T Consensus 118 ~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~ 197 (419)
T 2eo5_A 118 EASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVIE 197 (419)
T ss_dssp HHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHHH
Confidence 999987653 48999999999987644332 111 24556665321 1112 3688
Q ss_pred HHH-hhhcc----CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCE
Q 014631 174 GLE-ALADE----NTVAMVIVNPG-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPV 246 (421)
Q Consensus 174 ~l~-~~~~~----~~~~i~~~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 246 (421)
+++ +.+++ ....+++++|+ ||||. ..+.+++++|.++|++||+++|+||+|+++.+.|... .+...+...++
T Consensus 198 ~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d~ 276 (419)
T 2eo5_A 198 FIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPDV 276 (419)
T ss_dssp HHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSE
T ss_pred HHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCCE
Confidence 998 87763 23346677885 67896 5678889999999999999999999999887665422 22222222333
Q ss_pred EEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631 247 ITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325 (421)
Q Consensus 247 i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (421)
+ ||||.|+ +| +|+||+++++ +++ .+......+.+.+++++.++.++|+. .++..+++++++
T Consensus 277 ~---t~sK~~~-~G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~-----~~~~~~~~~~~~ 338 (419)
T 2eo5_A 277 I---TLAKALG-GGIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDI-----VKDLLPHVNEIG 338 (419)
T ss_dssp E---EECGGGG-TTTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHH
T ss_pred E---Eeccccc-CCccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHH-----HHHHHHHHHHHH
Confidence 3 7999987 49 9999999974 233 33112223457788999999998874 222778888999
Q ss_pred HHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHH
Q 014631 326 DICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSAL 403 (421)
Q Consensus 326 ~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l 403 (421)
+++.+.|+++ +..+ +..|+|+++++.... .... +...+ .++||.+.|+. .+++|++++ .+++++
T Consensus 339 ~~l~~~L~~~--~~~~--~~~g~~~~i~~~~~~----~~~~-~~~~l-~~~Gv~v~~~~----~~~lRis~~~~~t~e~i 404 (419)
T 2eo5_A 339 KIFAEELQGL--ADDV--RGIGLAWGLEYNEKK----VRDR-IIGES-FKRGLLLLPAG----RSAIRVIPPLVISEEEA 404 (419)
T ss_dssp HHHHHHHTTS--SSEE--EEETTEEEEECSCHH----HHHH-HHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHH
T ss_pred HHHHHHHHHh--hhhe--EeeeEEEEEEEecCc----cHHH-HHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHH
Confidence 9999999876 3312 334667888883110 0133 55555 47899999974 578999876 789999
Q ss_pred HHHHHHHHHHHHHh
Q 014631 404 EEGLGRIKAFCQRH 417 (421)
Q Consensus 404 ~~~~~~l~~~~~~~ 417 (421)
++++++|+++++++
T Consensus 405 ~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 405 KQGLDILKKVIKVV 418 (419)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 123
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=6.6e-32 Score=260.12 Aligned_cols=341 Identities=14% Similarity=0.138 Sum_probs=233.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC---CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF---DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.+..++|+..+.+....+ +.++.+.+++.++++.... ..|. .....++++.+++++ + .++++|++|+|+
T Consensus 41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----~--~~~~~v~~~~gg 112 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGIT-HAPAIELCRKLVAMT----P--QPLECVFLADSG 112 (429)
T ss_dssp TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEE-CHHHHHHHHHHHHHS----C--TTCCEEEEESSH
T ss_pred CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccC-CHHHHHHHHHHHHhC----C--CCCCEEEEeCCH
Confidence 367789998887543333 3689999999999876321 1232 212345666666665 3 568899999999
Q ss_pred HHHHHHHHHHhc---C----CCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccC---CCCc-cCCHH
Q 014631 119 KQAIQVILTVLA---R----PGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLP---EKGW-EVDLD 173 (421)
Q Consensus 119 ~~al~~~~~~l~---~----~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~d~e 173 (421)
+++++.+++.+. + |||+|++.+|+|+++...+... | .++..++.+. ++.+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 999999998653 2 6899999999999865433221 1 1234444431 1123 47899
Q ss_pred HHHhhhcc--CceEEEEeCC--CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 174 GLEALADE--NTVAMVIVNP--GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 174 ~l~~~~~~--~~~~i~~~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
++++.+++ ....+++++| +||||. ..+.+++++|+++|++||+++|+||+|+++.+.|... .+...+...+++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~~- 270 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL- 270 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCEE-
Confidence 99998863 2334556677 589996 5577889999999999999999999999876555322 222222222333
Q ss_pred EcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh------cccccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 249 LGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 249 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
||||.++ +| +|+||++++ +++++.+... ...+.+++++++.++.++++...+ ++..+++
T Consensus 271 --t~sK~l~-~G~~~iG~~~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~ 336 (429)
T 1s0a_A 271 --CLGKALT-GGTMTLSATLTT--------REVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV 336 (429)
T ss_dssp --EECGGGG-TSSSCCEEEEEC--------HHHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred --Eeccccc-CCCccceEEEeC--------HHHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence 7899976 58 999999985 3566766553 123456788999888888864222 2345667
Q ss_pred HHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631 322 RDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA- 397 (421)
Q Consensus 322 ~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~- 397 (421)
+++++++.+.|+++ |++. ...+ .|.++|+.++.. .+..++...++ ++||.+.++ .+++|++++
T Consensus 337 ~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~ 403 (429)
T 1s0a_A 337 ADIEVQLREQLAPARDAEMVA-DVRV-LGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY 403 (429)
T ss_dssp HHHHHHHHHHHGGGGGCTTEE-EEEE-ETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EEEE-eeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence 77888888888764 4544 2123 356888887642 13566776664 679999874 368999976
Q ss_pred -CCHHHHHHHHHHHHHHHHHhhh
Q 014631 398 -IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++++++++++++|++++++++.
T Consensus 404 ~~t~e~i~~~~~~l~~~~~~~~~ 426 (429)
T 1s0a_A 404 IILPQQLQRLTAAVNRAVQDETF 426 (429)
T ss_dssp TCCHHHHHHHHHHHHHHTSSGGG
T ss_pred CCCHHHHHHHHHHHHHHHHhhhc
Confidence 7999999999999998876543
No 124
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.6e-32 Score=261.40 Aligned_cols=327 Identities=17% Similarity=0.166 Sum_probs=238.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC-CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF-DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
.+.+++||..+.+....+ ..+|.+.+++.+.+..... ..+.+.....++++.++++++ ++++++++|+++
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g--------~~~v~~~~~gt~ 104 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLTN--------KEMVLPMNTGAE 104 (392)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHHT--------CSEEEEESSHHH
T ss_pred CCCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhcC--------CCEEEEeCcHHH
Confidence 377899998875442222 2579999999999876321 111233445688888888762 679999999999
Q ss_pred HHHHHHHHhcCC----------CCeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCccCCHHHHHh
Q 014631 121 AIQVILTVLARP----------GANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWEVDLDGLEA 177 (421)
Q Consensus 121 al~~~~~~l~~~----------gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~d~e~l~~ 177 (421)
|+..+++.+..+ +|+|++..|+|+++...+...+.. +..++. .|++++++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999877643 689999999998876665444322 222221 27999999
Q ss_pred hhccCceEEEEeCCCCCcccccCHHH-HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccccc
Q 014631 178 LADENTVAMVIVNPGNPCGNVFTYQQ-LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRW 256 (421)
Q Consensus 178 ~~~~~~~~i~~~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 256 (421)
.++++++++++++|+||||.+++.++ +++|.++|++||+++|+||+|+++.+.|... .....+...+++ ||||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence 99888999999999999999996555 9999999999999999999999877666533 222223222333 778985
Q ss_pred CCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 257 IVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 257 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
+ +| +|+||++++ +++++.+..... ...+++++.+.++.++++... .++..++++++++++.+.|++
T Consensus 254 ~-gG~~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 254 G-GGVFPISCAAAN--------RDILGVFEPGSHGSTFGGNPLACAVSIAALEVLE---EEKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp G-TTTSCCEEEEEC--------HHHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTT
T ss_pred h-CChhhhEEEEEC--------HHHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHH
Confidence 3 46 999999985 356666655432 345788899999888887521 156778889999999999988
Q ss_pred C--CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 335 I--PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 335 ~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
+ +.+. ...+. +.++++.++. +..++...+ .++||.+.||. .+++|++++ .+++++++++++|
T Consensus 322 ~~~~~~~-~~~~~-g~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l 387 (392)
T 3ruy_A 322 IDNPMIT-EVRGK-GLFIGIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI 387 (392)
T ss_dssp CCCTTEE-EEEEE-TTEEEEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred hcCCCce-EEEee-eeEEEEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 6 3343 22333 4566666653 356677665 57899999875 589999976 7899999999999
Q ss_pred HHHH
Q 014631 411 KAFC 414 (421)
Q Consensus 411 ~~~~ 414 (421)
++++
T Consensus 388 ~~~l 391 (392)
T 3ruy_A 388 KAVL 391 (392)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9876
No 125
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=4.9e-32 Score=259.97 Aligned_cols=336 Identities=14% Similarity=0.142 Sum_probs=234.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||+.|......+ ..++.+.+++.+++++.. .+. .....++++.+++.+.+.+| .+++++|+|+++|
T Consensus 55 ~g~~~lD~~~~~~~~~lG-~~~p~v~~ai~~~~~~~~--~~~-~~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA 126 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALG-HCHPALVEALKSQGETLW--HTS-NVFTNEPALRLGRKLIDATF----AERVLFMNSGTEA 126 (420)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCC--CCC-TTSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred CCCEEEEccccccccccC-CCCHHHHHHHHHHHHhcc--ccc-CccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence 477889998774221222 367999999999987632 111 11223555556666655544 5799999999999
Q ss_pred HHHHHHHhcC-------CC-CeEEEcCCCCcchHHH-HhhcCce------------eEeeeccCCCCccCCHHHHHhhhc
Q 014631 122 IQVILTVLAR-------PG-ANILLPKPGFPLYEAN-ARHTRLE------------IRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 122 l~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
+..+++++.. +| ++|++.+|+|+++... ....|.+ +..++. .|++++++.++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~ 199 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD 199 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence 9999998865 77 5999999999887543 3344543 233332 28999999998
Q ss_pred cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC
Q 014631 181 ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP 259 (421)
Q Consensus 181 ~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 259 (421)
+++++++++.++|++|. .++.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+++ ||||.++ +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence 88888877777888884 6899999999999999999999999998877666532 122222222333 7899987 8
Q ss_pred CceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC---
Q 014631 260 GWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--- 335 (421)
Q Consensus 260 G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--- 335 (421)
|+|+||+++++ ++++.+.... ..+.+.+++++.++.++|+...+ ++..++++++++++.+.|+++
T Consensus 275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999962 4555554421 23347788999988888865322 355667777777777777653
Q ss_pred -CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 336 -PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 336 -~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
|.+. ...+ .|.++++.++... ..+..++...+ .++||.+.|+. ++++|++++ .+++++++++++|++
T Consensus 344 ~~~~~-~~~~-~g~~~~v~~~~~~---~~~~~~l~~~l-~~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 344 FDIFS-DIRG-MGLLIGAELKPKY---KGRARDFLYAG-AEAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp HCCEE-EEEE-ETTEEEEEECGGG---TTCHHHHHHHH-HHTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeE-EEEe-cceEEEEEECCCc---hHHHHHHHHHH-HHCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3333 1123 4667888886421 01355666665 45899999974 578999976 799999999999999
Q ss_pred HHHHhh
Q 014631 413 FCQRHA 418 (421)
Q Consensus 413 ~~~~~~ 418 (421)
+++++.
T Consensus 414 ~l~~~~ 419 (420)
T 2pb2_A 414 AVGKVV 419 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987753
No 126
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=9.8e-34 Score=270.40 Aligned_cols=337 Identities=15% Similarity=0.099 Sum_probs=220.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--CC-CCC----CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--FD-CYS----PSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~-~y~----~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
..++|+|+.+.+. ++++.+.+++.+.+.... .. .|. ......++++.+++++ ++++++|++|
T Consensus 18 ~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~ 86 (400)
T 3vax_A 18 GSHMTYLDAAATT-----RVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT 86 (400)
T ss_dssp ----CCCCCCCCS-----SSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred cCCcEEecCCCCC-----CCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence 4567778777644 678999999999886421 10 111 1122356666666665 3567899999
Q ss_pred CCHHHHHHHHHHHhc----CCCC-eEEEcCCCCcchHHHHhh---cCceeEeeeccCCCCccCCHHHHHhhhccCceEEE
Q 014631 116 AGCKQAIQVILTVLA----RPGA-NILLPKPGFPLYEANARH---TRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMV 187 (421)
Q Consensus 116 ~g~~~al~~~~~~l~----~~gd-~Vl~~~p~y~~~~~~~~~---~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~ 187 (421)
+|+++++..+++++. ++|| +|+++.++|+++...+.. .|++++.++++. ++.+|++++++.+++++++++
T Consensus 87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~ 164 (400)
T 3vax_A 87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS 164 (400)
T ss_dssp SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence 999999999999987 8999 999999999987655543 689999988754 456899999999988999999
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLV 267 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 267 (421)
+++|+||||.+++ +++|.++|++||+++|+|++|+... ....+..+ ..+++.|+||.++.+| +|+++
T Consensus 165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~ 231 (400)
T 3vax_A 165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV 231 (400)
T ss_dssp CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence 9999999999977 6889999999999999999998522 22222222 2378899999876555 67777
Q ss_pred -eeCCCcchhHHHHHHHHh----hhcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 268 -TSDPSGILQELRIVDSIK----GYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 268 -~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
++++........+...+. ......++++...+.++..+++. ...++++..++++++++++.+.|+ .+++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~-~~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~- 308 (400)
T 3vax_A 232 TRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKI-FEAEHAQWQVAAQDLRSRLLAGLA-STSFQVN- 308 (400)
T ss_dssp ECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHH-HHHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC-
T ss_pred EecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHH-HHhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe-
Confidence 764210000000001000 00112345667777777677653 234678889999999999999999 7888743
Q ss_pred CCCc---eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC-------------------CCeEEEEe-c--
Q 014631 343 KPEG---SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM-------------------KNWLRITF-A-- 397 (421)
Q Consensus 343 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~iRi~~-~-- 397 (421)
.+.+ +.++++.++. .+..++...| . +||.+.+|..|.. .+++|+++ +
T Consensus 309 ~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~ 380 (400)
T 3vax_A 309 GDQDHVVPHILNLSFED------VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ 380 (400)
T ss_dssp SCTTSBCTTEEEEECTT------CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred CCcccCCCCEEEEEeCC------CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence 4443 3456666652 1456666665 5 7999998865432 38999999 6
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~ 416 (421)
.+++++++++++|++++++
T Consensus 381 ~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 381 ATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp -------------------
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 6789999999999988754
No 127
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.3e-31 Score=255.32 Aligned_cols=335 Identities=13% Similarity=0.118 Sum_probs=232.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||+.+.+....+ ..+|.+.+++.++++... +.| ..+..++++.+++++.+..| ++++++|+|+++|
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~-~~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea 105 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCALG-YNHAKFNAKIKAQVDKLL-HTS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES 105 (395)
T ss_dssp TCCEEEESSHHHHTCTTC-BSCHHHHHHHHHHHTTCS-CCC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred CCCEEEECCCcHHhccCC-CCCHHHHHHHHHHHHhcc-ccc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 478899999885442222 368999999999987632 122 11223444555555544433 5799999999999
Q ss_pred HHHHHHHhc-------CCCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 122 IQVILTVLA-------RPGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 122 l~~~~~~l~-------~~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
+..+++.+. .++|+|++.+|+|+++...+...+. ++..++. .|++++++.+++
T Consensus 106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~ 178 (395)
T 3nx3_A 106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE 178 (395)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence 999998775 3479999999999987655444332 2233322 279999999987
Q ss_pred CceEEEEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC
Q 014631 182 NTVAMVIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG 260 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 260 (421)
+++++++..++|++|.. ++++++++|.++|++||+++|+||+|+++.+.|... .....+.... +.||||.++. |
T Consensus 179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~d---~~t~sK~~~~-G 253 (395)
T 3nx3_A 179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQILPD---IMTSAKALGC-G 253 (395)
T ss_dssp TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGTT-T
T ss_pred CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCCCC---EEEecccccC-C
Confidence 78877777777777766 678889999999999999999999999876655432 2222222222 3478999875 8
Q ss_pred ceEEEEEeeCCCcchhHHHH-HHHHhhhcc-cccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 261 WRLGWLVTSDPSGILQELRI-VDSIKGYLN-ISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 261 ~r~G~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+|+||++++ +++ .+.+..... .+.+.+++++.++.++++... +...++.++..+..++.+.+.+.++|.
T Consensus 254 ~~~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (395)
T 3nx3_A 254 LSVGAFVIN--------QKVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDF 325 (395)
T ss_dssp SCCEEEEEC--------HHHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CceEEEEEc--------hhhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999986 356 676765432 345778899998888886422 233444444444455555555555555
Q ss_pred ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
+. . .+..|.++++.++.. .+..+++..+ .++||.+.++. .+++|++++ .+++++++++++|+++++
T Consensus 326 ~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 326 CK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp EE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred eE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 44 2 233467888888642 1355666655 56799999874 589999976 799999999999999886
Q ss_pred H
Q 014631 416 R 416 (421)
Q Consensus 416 ~ 416 (421)
+
T Consensus 394 ~ 394 (395)
T 3nx3_A 394 S 394 (395)
T ss_dssp T
T ss_pred h
Confidence 4
No 128
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.1e-31 Score=252.58 Aligned_cols=327 Identities=12% Similarity=0.044 Sum_probs=234.3
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
+.++|+-|. .+.++.+.+++.+.+.+.....+.......++.+.+.+++.+.+|.. ++++|++|+|++++++.
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER 76 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence 346666552 25677888888888776431111122223355556666666656533 56789999999999999
Q ss_pred HHHHhcCCCCeEEEcCCCCc-chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 125 ILTVLARPGANILLPKPGFP-LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 125 ~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
++.++.++ +.+++..+.|. .+...+...|++++.++.+ .++.+|+|+++ ++++++++++++|+||||.+++
T Consensus 77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence 99999887 44555555554 2345677789999998874 34678999998 6778999999999999999987
Q ss_pred HHHHHHHHHhc-CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCCcchhHHHHH
Q 014631 204 LQKIAEKARKL-GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPSGILQELRIV 281 (421)
Q Consensus 204 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 281 (421)
+++|.++|++| |+++|+|++|+.+.. ...+.. ..+++.|+||+++ .+| +|+++++ +++.
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~----~~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~--------~~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYP----KFDWTK-----IDSVFFSVQKCFGLPAG--LGVWILN--------DRVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSS----CCCTTS-----CSEEEEETTSTTCCCSC--CEEEEEE--------HHHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCc----ccChhH-----CcEEEEecccccCCCCc--eEEEEEC--------HHHH
Confidence 77788999999 999999999986431 111211 2377899999988 677 5777775 2444
Q ss_pred HHHhhhcc----------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 282 DSIKGYLN----------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 282 ~~~~~~~~----------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+.+..... ...+++...+.++..+++......++++.++++++++++.+.|+++||+.
T Consensus 210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 44443221 13466777777777777643334478889999999999999999998988
Q ss_pred ccCCC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 340 CPRKP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 340 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
+. .+ ..+.++|+.++. +..++...| .++||.+.+|..+...+++|++++ ++++++++++++|+++
T Consensus 290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l-~~~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKIL-EPFDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHH-GGGTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ec-cCChhhcCCceEEEecCC-------CHHHHHHHH-HHCCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 43 32 234567777753 366777766 455999999977666789999997 6899999999999876
Q ss_pred H
Q 014631 414 C 414 (421)
Q Consensus 414 ~ 414 (421)
+
T Consensus 361 ~ 361 (362)
T 3ffr_A 361 I 361 (362)
T ss_dssp T
T ss_pred h
Confidence 4
No 129
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=100.00 E-value=1.7e-31 Score=259.27 Aligned_cols=357 Identities=12% Similarity=-0.001 Sum_probs=240.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||..|...... ...+|.+.+++.+++.+.. ..|....+..++++.+++++.+..+ .+.++|++|+|+++|
T Consensus 49 ~G~~~lD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~-~~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGseA 124 (460)
T 3gju_A 49 NGRKSIDAFAGLYCVNV-GYGRQKIADAIATQAKNLA-YYHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSDA 124 (460)
T ss_dssp TCCEEEETTHHHHTCTT-CBCCHHHHHHHHHHHHHHS-CCCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccC-CCCCHHHHHHHHHHHHhcc-ccccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHHH
Confidence 47889999988433222 2467999999999987632 1343334445677777777766543 457899999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC---CCCccCC------
Q 014631 122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP---EKGWEVD------ 171 (421)
Q Consensus 122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~---~~~~~~d------ 171 (421)
+..+++.+.+ ++++|++.+++|+++...+...+. .+..++.+. .++++.+
T Consensus 125 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~ 204 (460)
T 3gju_A 125 NETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQ 204 (460)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHH
Confidence 9999998864 458999999999988655544322 233343221 0112233
Q ss_pred --HHHHHhhhcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 172 --LDGLEALADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 172 --~e~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
+++|++.+.. +..++++++| +|++|. +++.+.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus 205 ~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~p 283 (460)
T 3gju_A 205 HCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIKP 283 (460)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence 5788887752 3334455555 667776 6788889999999999999999999999887666432 222233222
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccc-hhHHH
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTK-EDFFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 315 (421)
++ .+|||+++.+++|+||++++ +++++.+... . ..+.+.+++++.++.++|+... +...+
T Consensus 284 di---~t~sK~l~gG~~~lg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 352 (460)
T 3gju_A 284 DL---ITIAKGLTSAYAPLSGVIVA--------DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVT 352 (460)
T ss_dssp SE---EEECGGGTTTSSCCEEEEEE--------HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred Ce---eeeehhhcCCCCCeEEEEEC--------HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 23 37899975433899999996 4677777421 2 2345788999999998887432 34456
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc--C----CCChHHHHHHHHhhcCeeEEeCCCCCCC
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE--G----ISDDMEFALQLAKEESVIVLPGMAVGMK 389 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~~ 389 (421)
+.++..+..++.+.+.++++|.+..+ .+ .|.++++.+...... . .....++... +.++||.+.|+. ..
T Consensus 353 ~~~~~~~~~~~~l~~~l~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~---~~ 426 (460)
T 3gju_A 353 NAGETGAYFRAELAKAVGGHKNVGEV-RG-DGMLAAVEFVADKDDRVFFDASQKIGPQVATA-LAASGVIGRAMP---QG 426 (460)
T ss_dssp HHHHHHHHHHHHHHHHHTTSTTEEEE-EE-ETTEEEEEECSBTTTTBCCCGGGCHHHHHHHH-HHHTTEECEECS---SS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEE-ee-eeEEEEEEEccCccccccccchHHHHHHHHHH-HHHCCeEEecCC---CC
Confidence 66666666677777777777665522 33 355777776532100 0 0013345554 456799999975 35
Q ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 390 NWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+++|++++ .+++++++++++|++++++..++
T Consensus 427 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 459 (460)
T 3gju_A 427 DILGFAPPLCLTREQADIVVSKTADAVKSVFAN 459 (460)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 89999965 79999999999999999887654
No 130
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=9.2e-32 Score=259.88 Aligned_cols=352 Identities=14% Similarity=0.063 Sum_probs=233.1
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-DDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~~~g~~~ 120 (421)
.|..++||+.|.+....+ ..+|.+.+++.+++.+. ..|....+..++++.+++++.+.++. .. +++++|+|+++
T Consensus 41 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~--~~~~~v~~~~ggse 115 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLG-YGHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPG--EGTHKIWFGHSGSD 115 (439)
T ss_dssp TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTC--TTTEEEEEESSHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCC--CCCCEEEEeCCHHH
Confidence 478899999998754333 27899999999998874 24544455667888888888776653 34 69999999999
Q ss_pred HHHHHHHHh--cCCCCeEEEcCCCCcchHHHHhhcCcee---------------EeeeccCCCCccC----CHHHHHhhh
Q 014631 121 AIQVILTVL--ARPGANILLPKPGFPLYEANARHTRLEI---------------RHFDLLPEKGWEV----DLDGLEALA 179 (421)
Q Consensus 121 al~~~~~~l--~~~gd~Vl~~~p~y~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~----d~e~l~~~~ 179 (421)
++..+++.+ ..+++.|++.++.|+++...+...+... ..++.+. ..... |++++++.+
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 116 ANEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYRP-YRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSSC-BTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCCc-ccccccHHHHHHHHHHHH
Confidence 999999885 2356789999999988765554443221 2233211 01011 689999988
Q ss_pred ----ccCceEEEEeCCCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 180 ----DENTVAMVIVNPGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 180 ----~~~~~~i~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
.++++++++..++|++|.+. +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+++ ||||
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~-~~~~~~~~~di~---s~sK 270 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLH-CFEHEGFVPDIL---VLGK 270 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSS-GGGGTTCCCSEE---EECG
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhcCCCCCEE---EEcc
Confidence 34556666666677888765 45559999999999999999999999876655422 222333222333 8999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHh
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRI 332 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l 332 (421)
.|+ +|+|+||++++ +++++.+.... ..+. .+++++.++.++++... +...++.++..+..++.+.+.+
T Consensus 271 ~~~-~G~riG~~~~~--------~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~ 340 (439)
T 3dxv_A 271 GLG-GGLPLSAVIAP--------AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELA 340 (439)
T ss_dssp GGG-TTSCCEEEEEE--------HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcceEEEEEC--------HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 987 59999999996 35666665543 2344 78888888888876422 2223333333333334444444
Q ss_pred hcCCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHH
Q 014631 333 KEIPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGL 407 (421)
Q Consensus 333 ~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~ 407 (421)
.+++.+. . .+..|.++++.+..... +......++...+ .++||.+.|+..+ ++++|++++ .+++++++++
T Consensus 341 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l 415 (439)
T 3dxv_A 341 KRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRA-YQLGLVVYYVGMN--GNVLEFTPPLTITETDIHKAL 415 (439)
T ss_dssp HHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHH-HHHTEECEEESTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred HhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHH-HHCCcEEeecCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 3455444 2 23446677777632100 0001234566655 4569999998532 478999876 7899999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
++|+++++++.
T Consensus 416 ~~l~~~l~~~~ 426 (439)
T 3dxv_A 416 DLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHTGG
T ss_pred HHHHHHHHHHh
Confidence 99999998763
No 131
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=8.2e-32 Score=257.66 Aligned_cols=339 Identities=14% Similarity=0.094 Sum_probs=237.4
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---CCHH--HHHH-HHHHHhhhCCCCCCCCcEEEcCC
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---GILP--ARRA-IADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---g~~~--l~~~-ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.++++|..|.+. .++.+.+++.+.+.+.....|+... |.+. +.+. ..+++.+.+| .++++|++++|
T Consensus 23 ~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~la~~~g--~~~~~i~~~sG 94 (407)
T 2dkj_A 23 REGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIERAKALFG--AAWANVQPHSG 94 (407)
T ss_dssp HTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH
T ss_pred hcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHHHHHHhC--CCcceEEecch
Confidence 578999988743 3799999999988642234555332 4443 3332 1123333333 44555656665
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCC-CCccCCHHHHHhhhcc-CceEEEEeCCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPE-KGWEVDLDGLEALADE-NTVAMVIVNPG 192 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~-~~~~~d~e~l~~~~~~-~~~~i~~~~p~ 192 (421)
++++..+++++.++||+|++++|+|+++. ..+...|.++..++.+.+ +++.+|++++++.+++ +++++++++|+
T Consensus 95 -t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~p~ 173 (407)
T 2dkj_A 95 -SQANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRPDTELIDLEEVRRLALEHRPKVIVAGASA 173 (407)
T ss_dssp -HHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCTTTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred -HHHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCcccCccCHHHHHHHHhhcCCeEEEEeccc
Confidence 56999999999999999999999998873 445555664444444322 3567999999998874 78888888999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
|| ...+ +++|.++|++||+++|+||+|+. +.+.+.....+ + ...+++.|+||+ ++|.|+||+++++
T Consensus 174 ~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di~~~s~sK~--l~g~~~G~~~~~~- 240 (407)
T 2dkj_A 174 YP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHVVTSTTHKT--LRGPRGGLILSND- 240 (407)
T ss_dssp CC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSEEEEESSGG--GCCCSCEEEEESC-
T ss_pred cC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccEEEEecccc--CCCCCceEEEECC-
Confidence 97 4433 89999999999999999999988 44444322111 1 135889999996 4588899999863
Q ss_pred CcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 272 SGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
+++.+.+..... ..++++.....++.++++.....++++..++++++++++.+.|+++ |+.+...+..+++
T Consensus 241 ------~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 313 (407)
T 2dkj_A 241 ------PELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARR-GYRIVTGGTDNHL 313 (407)
T ss_dssp ------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred ------HHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhC-CceeecCCCCceE
Confidence 346666655432 2234555445466666654334677888999999999999999988 7774322457888
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC------CCCCeEEEEec------CCHHHHHHHHHHHHHHHHH
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV------GMKNWLRITFA------IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~ 416 (421)
+|+.++... .+..++... +.++||.+.+|..+ ..++++|++++ .+++++++++++|++++++
T Consensus 314 ~~~~~~~~~----~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 314 FLVDLRPKG----LTGKEAEER-LDAVGITVNKNAIPFDPKPPRVTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp EEEECGGGT----CCHHHHHHH-HHHTTEECEECCCTTCSSCTTTCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred EEEECcccC----CCHHHHHHH-HHHcCceecCCcCccccccccCCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 999886421 134556555 47789999998753 22578999996 6899999999999999877
No 132
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=3.1e-32 Score=254.98 Aligned_cols=328 Identities=16% Similarity=0.160 Sum_probs=224.6
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
...+|+|+.+... .+++.+++++.+.... ...|++..+..+||++++++++ . +++++++||++++
T Consensus 2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~g------~--~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETFG------K--EAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHhC------C--ceEEEecCcHHHH
Confidence 3567899988744 3557788887654322 1357777778899999999984 2 4678888889999
Q ss_pred HHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCC
Q 014631 123 QVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGN 193 (421)
Q Consensus 123 ~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~n 193 (421)
.+++.++.++||+|++++|+|.+.. ..+...|++++.+ .+ .++.+|++++++.+++ +++++++++|+|
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 9999999999999999999997543 2567789888877 32 2455899999998875 578899999999
Q ss_pred Cc-ccccCHHHHHHHHHHHHhcCcEEEEcccccccc--cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 194 PC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT--FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 194 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
|| |.++|.+++++|+++|++||+++|+|++|..+. +.+.....+.. ..+ .++.|+||+++++ +|++++.+
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~--~~d--~~~~s~sK~l~~~---~G~~~~~~ 216 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG--YAD--SVMFCLSKGLCAP---VGSVVVGD 216 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH--TCS--EEEEESSSTTCCS---SCEEEEEC
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc--ccc--EEEEecccccCCC---ceEEEEcC
Confidence 99 999999999999999999999999999875321 11222212111 112 3345899997643 57544322
Q ss_pred CCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce
Q 014631 271 PSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+++++.+....... ...+...+.++...++... ..+. +..++++.+.+.|+++ ++.+...+..+
T Consensus 217 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~----~~~~~~~~l~~~L~~~-~~~~~~~~~~~ 283 (347)
T 1jg8_A 217 -------RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRLK----EDHENARFLALKLKEI-GYSVNPEDVKT 283 (347)
T ss_dssp -------HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTHH----HHHHHHHHHHHHHHHH-TCBCCGGGCCS
T ss_pred -------HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHhc-CceeccCCCcc
Confidence 34555554433211 1233444555545554321 1222 2234567777788776 66522234556
Q ss_pred eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 348 MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
.++|+.++... .+..+++..| .++||.+.++. .+++|++++ .+++++++++++|+++++++
T Consensus 284 ~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 284 NMVILRTDNLK----VNAHGFIEAL-RNSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SEEEEECTTSS----SCHHHHHHHH-HHHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccccc----CCHHHHHHHH-HHCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 78888886311 1466777776 56799999853 468999986 68999999999999998654
No 133
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=100.00 E-value=6.9e-32 Score=261.65 Aligned_cols=351 Identities=13% Similarity=0.092 Sum_probs=230.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||..|.+....+ ..+|.+.+++.+++.+... .+..+..+.+..+++++.+.++ ...+ |++|+|+++|
T Consensus 47 ~g~~~lD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggseA 119 (452)
T 3n5m_A 47 QGKRYLDGMSGLWCVNSG-YGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSEA 119 (452)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHHH
Confidence 478899999885443333 4689999999999876321 2222334555566666555444 3344 9999999999
Q ss_pred HHHHHHHhc-----C---CCCeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCC--cc--------C
Q 014631 122 IQVILTVLA-----R---PGANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKG--WE--------V 170 (421)
Q Consensus 122 l~~~~~~l~-----~---~gd~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~--~~--------~ 170 (421)
+..+++.+. . ++++|++.+|+|+++...+...+.. ...++...... ++ .
T Consensus 120 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (452)
T 3n5m_A 120 NETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVE 199 (452)
T ss_dssp HHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHH
Confidence 999999886 4 7799999999999886655544332 22222111000 00 0
Q ss_pred CHHHHHhhhc----cCceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 171 DLDGLEALAD----ENTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 171 d~e~l~~~~~----~~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
++++|++.+. ++++++++..+ +| ||.++ +.+.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus 200 ~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~~ 277 (452)
T 3n5m_A 200 CVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVKP 277 (452)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCCC
Confidence 1788988876 44555655555 79 99766 77889999999999999999999999987666532 222333222
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh---h----cccccCCchHHHHHHHHHhhccc-hhHHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG---Y----LNISSGPATFVQGAVPQIFKNTK-EDFFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~ 315 (421)
+ +.+|||.++. | +|+||++++ +++++.+.. . ...+.+.+++++.++.++|+... +...+
T Consensus 278 d---i~t~sK~l~~-G~~~ig~~~~~--------~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~ 345 (452)
T 3n5m_A 278 D---IITMAKGITS-AYLPLSATAVK--------REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIE 345 (452)
T ss_dssp S---EEEECGGGGT-TSSCCEEEEEE--------HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHH
T ss_pred C---EEeecccccC-CCcceEEEEEC--------HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHH
Confidence 2 3378999866 8 999999996 467777743 1 12345788999999988887432 23334
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC--C--CChHHHHHHHHhhcCeeEEeCCCCCC--C
Q 014631 316 KIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG--I--SDDMEFALQLAKEESVIVLPGMAVGM--K 389 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~ll~~~gv~v~~g~~~~~--~ 389 (421)
+.++..+..++.+.+.+.++|.+..+ .+ .|.++++.+....... . ....++... +.++||.+.|+..|.. .
T Consensus 346 ~~~~~~~~l~~~L~~~~~~~~~~~~~-~~-~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~~~~~~~~~~~~~ 422 (452)
T 3n5m_A 346 RSAQMGSLLLEQLKEEIGEHPLVGDI-RG-KGLLVGIELVNDKETKEPIDNDKIASVVNA-CKEKGLIIGRNGMTTAGYN 422 (452)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTEEEE-EE-SSSCEEEEEEEETTTTEECCHHHHHHHHHH-HHHTTEECEECTTSSTTCC
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEE-EE-EEEEEEEEEecCCcccCCCCHHHHHHHHHH-HHHCCcEEeecCcccCCCC
Confidence 44444444455555555556555422 33 3556677664321000 0 001345554 4567999999876533 5
Q ss_pred CeEEEEec--CCHHHHHHHHHHHHHHHHH
Q 014631 390 NWLRITFA--IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 390 ~~iRi~~~--~~~e~l~~~~~~l~~~~~~ 416 (421)
+++|++++ .+++++++++++|++++++
T Consensus 423 ~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 423 NILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 78999876 7999999999999998764
No 134
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=100.00 E-value=1e-31 Score=259.05 Aligned_cols=350 Identities=14% Similarity=0.091 Sum_probs=230.3
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+..++||..+.+....+ ..+|.+.+++.+++..... + ...+..+++..+++.+.+.++ .++++|++|+|+++|+
T Consensus 42 g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~-~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea~ 115 (433)
T 1zod_A 42 GRAILDFTSGQMSAVLG-HCHPEIVSVIGEYAGKLDH--L-FSEMLSRPVVDLATRLANITP--PGLDRALLLSTGAESN 115 (433)
T ss_dssp CCEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCCC--C-CTTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHHH
T ss_pred CCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCcc--c-ccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHHH
Confidence 67788987776433233 3689999999999876321 1 112223445555555555554 4578999999999999
Q ss_pred HHHHHHhc--CCCCeEEEcCCCCcchHHHHhhcC------------ceeEeeeccC--CCCc--------cCCHHHHHhh
Q 014631 123 QVILTVLA--RPGANILLPKPGFPLYEANARHTR------------LEIRHFDLLP--EKGW--------EVDLDGLEAL 178 (421)
Q Consensus 123 ~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~g------------~~~~~~~~~~--~~~~--------~~d~e~l~~~ 178 (421)
..+++.+. ..+++|++.+|+|+++...+.... ..+..++.+. ...+ .+|++++++.
T Consensus 116 ~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~ 195 (433)
T 1zod_A 116 EAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFDL 195 (433)
T ss_dssp HHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHHH
Confidence 99998653 235799999999998755433221 1233333321 1112 2468999988
Q ss_pred hcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631 179 ADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS 253 (421)
Q Consensus 179 ~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 253 (421)
+++ +...+++++| +||||. ..+.+++++|.++|++||+++|+||+|+++.+.|... .+...+...+ +.|||
T Consensus 196 l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~s 271 (433)
T 1zod_A 196 IDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTLS 271 (433)
T ss_dssp HHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred HHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEec
Confidence 863 3334566778 588996 5678899999999999999999999999876655421 1122222222 33899
Q ss_pred cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-c--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631 254 KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-N--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 254 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
|.|+. |+|+||++++ +++++.+.... . .+.+.+++++.++.++++...+ ++..++++++++++.+
T Consensus 272 K~~~~-G~~ig~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~ 339 (433)
T 1zod_A 272 KTLGA-GLPLAAIVTS--------AAIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLRR 339 (433)
T ss_dssp HHHHT-TSSCEEEEEC--------HHHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred ccccC-CCCeeEEEEh--------HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHH
Confidence 99875 9999999996 35667665532 1 3456788899888888864222 1234555566666666
Q ss_pred Hhhc----CCCccccCCCCceeEEEEecCcccc---cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHH
Q 014631 331 RIKE----IPCITCPRKPEGSMFVMVKLNLSLL---EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPS 401 (421)
Q Consensus 331 ~l~~----~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e 401 (421)
.|++ +|.+. . .+..|.|+|+.++.... +......++...+ .++||.+.||..|+.++++|++++ .+++
T Consensus 340 ~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~~~~~~lRi~~~~~~t~~ 416 (433)
T 1zod_A 340 GLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITREC-MNLGLSMNIVQLPGMGGVFRIAPPLTVSED 416 (433)
T ss_dssp HHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHH-HHTTEECCEECCTTSCCEEEECCCTTCCHH
T ss_pred HHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHH-HHCCCeEeccCCCCCCCEEEEECCcCCCHH
Confidence 6654 34433 2 23346677888753210 0001245566665 478999999987765589999875 7899
Q ss_pred HHHHHHHHHHHHHHHh
Q 014631 402 ALEEGLGRIKAFCQRH 417 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~ 417 (421)
++++++++|+++++++
T Consensus 417 ~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 417 EIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 135
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=4.1e-31 Score=251.21 Aligned_cols=314 Identities=12% Similarity=0.137 Sum_probs=228.5
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcCCC
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPKPG 142 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~p~ 142 (421)
+.+.+++.+.+..+. ..|.+..+..++|+.++++++ . ++.|++++| +++++.++.++ .++||+|+++.|+
T Consensus 17 ~~~~~a~~~~l~~~~-~~~~~~~~~~~l~~~la~~~~------~-~~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~~ 87 (388)
T 1b9h_A 17 DAERNGLVRALEQGQ-WWRMGGDEVNSFEREFAAHHG------A-AHALAVTNG-THALELALQVMGVGPGTEVIVPAFT 87 (388)
T ss_dssp HHHHHHHHHHHHTSC-CBTTTCSHHHHHHHHHHHHTT------C-SEEEEESCH-HHHHHHHHHHTTCCTTCEEEEESSS
T ss_pred HHHHHHHHHHHHcCC-eeecCCHHHHHHHHHHHHHhC------C-CeEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCCc
Confidence 899999999998743 256667778999999999984 2 256666665 89999999999 8999999999999
Q ss_pred CcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631 143 FPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 143 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 222 (421)
|+++...+...|++++.++++++ ++.+|++++++.+++++++|+ |+||||.+. ++++|.++|++||+++|+|+
T Consensus 88 ~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~---~l~~i~~la~~~~~~li~D~ 160 (388)
T 1b9h_A 88 FISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMA---DMDALAKISADTGVPLLQDA 160 (388)
T ss_dssp CTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCC---CHHHHHHHHHHHTCCBCEEC
T ss_pred cHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcC---CHHHHHHHHHHcCCEEEEec
Confidence 99999999999999999998643 467999999999987777665 999999995 47889999999999999999
Q ss_pred cccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHH--HHHHhhhcc----------
Q 014631 223 VYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRI--VDSIKGYLN---------- 289 (421)
Q Consensus 223 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~~~~~~~---------- 289 (421)
+|+.+. +.+. .+..++ .+.+.||||.++++|.|+||+++++.. + .+.+.....
T Consensus 161 a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~ 226 (388)
T 1b9h_A 161 AHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRRY 226 (388)
T ss_dssp TTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSSC
T ss_pred chhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCccc
Confidence 998632 3222 222222 377889997666777799999986532 2 233322111
Q ss_pred ------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCC-----CCceeEEEEecCccc
Q 014631 290 ------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRK-----PEGSMFVMVKLNLSL 358 (421)
Q Consensus 290 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~-----~~~~~~~~~~~~~~~ 358 (421)
.....+.+...++...+ .++++..++++++++++.+.|+++|++.+... +.+++++|+.++...
T Consensus 227 ~~~~~g~~~~~~~~~~a~~~~~~-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (388)
T 1b9h_A 227 FHKIAGSNMRLNEFSASVLRAQL-----ARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGLT 301 (388)
T ss_dssp CCCSCCCBCBCBHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTCC
T ss_pred eeecccccCCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCcC
Confidence 00113333333332222 34666778888899999999999888873321 345788999886310
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCCCC-----------------------------CCeEEEEec--C-CHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAVGM-----------------------------KNWLRITFA--I-EPSALEEG 406 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------------~~~iRi~~~--~-~~e~l~~~ 406 (421)
..+..++...| .++||.+.++..... ...+|++++ + +++|++++
T Consensus 302 ---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~~ 377 (388)
T 1b9h_A 302 ---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHAT 377 (388)
T ss_dssp ---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHHH
T ss_pred ---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHHH
Confidence 00234566655 567999998754210 135899997 6 89999999
Q ss_pred HHHHHHHHHH
Q 014631 407 LGRIKAFCQR 416 (421)
Q Consensus 407 ~~~l~~~~~~ 416 (421)
++.|++++++
T Consensus 378 ~~~l~~~~~~ 387 (388)
T 1b9h_A 378 AEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhh
Confidence 9999998764
No 136
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=6.1e-32 Score=257.57 Aligned_cols=336 Identities=17% Similarity=0.156 Sum_probs=231.5
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
+..++||+.|.+....+ +.++.+.+++.+.+..... ..| +.....++++.+++++ + .++++|++|+|+++
T Consensus 44 g~~~ld~~~~~~~~~~g-~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~--~~~~~v~~~~gg~~ 115 (395)
T 1vef_A 44 GNEYIDCVGGYGVANLG-HGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL----P--PELNRVFPVNSGTE 115 (395)
T ss_dssp SCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS----C--TTEEEEEEESSHHH
T ss_pred CCEEEEccCccccccCC-CCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc----C--CCcCEEEEcCcHHH
Confidence 56788988875432211 3789999999999876321 123 2223345555555554 3 46789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEEcCCCCcchH-HHHhhcCceeEe---eeccCCCC--ccCCHHHHHhhhccCceEEEEeCCC
Q 014631 121 AIQVILTVLA--RPGANILLPKPGFPLYE-ANARHTRLEIRH---FDLLPEKG--WEVDLDGLEALADENTVAMVIVNPG 192 (421)
Q Consensus 121 al~~~~~~l~--~~gd~Vl~~~p~y~~~~-~~~~~~g~~~~~---~~~~~~~~--~~~d~e~l~~~~~~~~~~i~~~~p~ 192 (421)
++..+++++. .+||.|++.+|+|++.. ..+...|.+... .|+..+.. ...|++++++.+++++++++++.++
T Consensus 116 a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 195 (395)
T 1vef_A 116 ANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPVQ 195 (395)
T ss_dssp HHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSEE
T ss_pred HHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCcc
Confidence 9999998764 57899999999997654 455556665221 11111100 0148999999998777777655557
Q ss_pred CCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
||||.++ +.+++++|.++|++||+++|+||+|+++.+.|... ++...+...+++ ||||+++. |+|+||+++++
T Consensus 196 ~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~- 269 (395)
T 1vef_A 196 GEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE- 269 (395)
T ss_dssp TTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH-
T ss_pred CCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH-
Confidence 8999875 67889999999999999999999999765444322 112222222233 88999876 89999999963
Q ss_pred CcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeE
Q 014631 272 SGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMF 349 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~ 349 (421)
++++.+.... ..+.+++++.+.++.++++.... ++..++++++++++.+.|++++. ..+ ..+..|++
T Consensus 270 -------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~~ 338 (395)
T 1vef_A 270 -------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGLM 338 (395)
T ss_dssp -------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETTE
T ss_pred -------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEEE
Confidence 4666655422 22346788888888888764221 34677888899999999987632 211 12344678
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
+|+.++. +..++...+++++||.+.|+. .+++|++++ .+++++++++++|++++
T Consensus 339 ~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 339 VGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 8888863 245677776537799999963 579999886 78999999999999875
No 137
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=100.00 E-value=2.7e-31 Score=257.76 Aligned_cols=353 Identities=12% Similarity=0.057 Sum_probs=237.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||..|.+....+ ..+|.+.+++.+++++... .|....+..+.++.+++++.+.++ .+.++|++|+|+++|
T Consensus 48 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggseA 123 (459)
T 4a6r_A 48 EGNKIIDGMAGLWCVNVG-YGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSES 123 (459)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHHH
T ss_pred CCCEEEECCCchhcccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 478899998885443233 3589999999999987431 333334455777777777777654 456799999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc-------------eeEeeeccC--C-CCccCC------
Q 014631 122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL-------------EIRHFDLLP--E-KGWEVD------ 171 (421)
Q Consensus 122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~d------ 171 (421)
+..+++.+.+ ++++|++.+|+|+++...+...+. .+..++.+. . +++ .|
T Consensus 124 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~~ 202 (459)
T 4a6r_A 124 VDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFGV 202 (459)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHHH
Confidence 9999998875 468999999999988765554432 222333211 0 111 34
Q ss_pred --HHHHHhhhcc---CceEEEEeCCC-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 172 --LDGLEALADE---NTVAMVIVNPG-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 172 --~e~l~~~~~~---~~~~i~~~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
+++|++.+.. +..++++++|. |++|. .++++++++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus 203 ~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~p 281 (459)
T 4a6r_A 203 VAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQP 281 (459)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCCC
Confidence 7788887752 44456677774 55555 4588999999999999999999999999987766532 222233222
Q ss_pred CEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh---hhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHH-
Q 014631 245 PVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK---GYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIV- 318 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~- 318 (421)
+++ +|||.++.+|+|+||++++ +++++.+. ... ..+.+.+++++.++.++|+... +...++.+
T Consensus 282 di~---t~sK~l~gg~~~lg~v~~~--------~~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 350 (459)
T 4a6r_A 282 DLF---TAAKGLSSGYLPIGAVFVG--------KRVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVKD 350 (459)
T ss_dssp SEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred Cee---ehhhhhcCCCCCccceeeC--------HHHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHHH
Confidence 333 6899976666999999985 46777776 222 2345788999999988887432 23344444
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCccccc------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeE
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLE------GISDDMEFALQLAKEESVIVLPGMAVGMKNWL 392 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~i 392 (421)
+.....++.+.+.|.++|.+..+ .+ .|.++++.+...... .......+...+ .++||.+.|+. +++
T Consensus 351 ~~~~~~~~~l~~~l~~~~~~~~~-~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~i 422 (459)
T 4a6r_A 351 DIGPYMQKRWRETFSRFEHVDDV-RG-VGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DHI 422 (459)
T ss_dssp THHHHHHHHHHHHHTTCTTEEEE-EE-ETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TEE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEE-EE-EEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CEE
Confidence 44445555555666666655522 33 355777776532100 000034455554 56799999963 799
Q ss_pred EEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 393 RITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 393 Ri~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
|++++ .+++++++++++|++++++..+
T Consensus 423 Ri~~~~~~t~e~i~~~l~~l~~~l~~~~~ 451 (459)
T 4a6r_A 423 VSAPPLVMTRAEVDEMLAVAERCLEEFEQ 451 (459)
T ss_dssp EECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99976 7999999999999999987643
No 138
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=100.00 E-value=1.4e-31 Score=255.32 Aligned_cols=326 Identities=15% Similarity=0.151 Sum_probs=240.7
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQ 123 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~ 123 (421)
.+++||+.|.|. .++.+.+++.+.+... .|.+..+..+++++++++++ . +++++++||++++.
T Consensus 30 ~~~id~~~~~~~------~~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE------LRAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH------THHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHH
T ss_pred CcccccCcCCCC------CCHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHH
Confidence 478999988754 2388999999988762 56666778899999999984 2 26778888899999
Q ss_pred HHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHH
Q 014631 124 VILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQ 202 (421)
Q Consensus 124 ~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~ 202 (421)
.+++++ +++||+|+++.|+|+++...++..|.+++.++.++ +++.+|++++++.+++++++|+ |+||||...+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHE-DHPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCS-SSSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCC-CCCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 89999999999999999999999999999998764 2467999999999987777665 6789999865
Q ss_pred HHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHH
Q 014631 203 QLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~ 279 (421)
+++|.++|+++|+++|+|++|+.+. +.+. .+..+. .+++.|+ ||.++.+| |+|++++++ ++
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~---~~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~-------~~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGR---RIGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGD-------PE 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTE---ETTCTT----CEEEEECCTTSSSCCSS-CCEEEEESC-------HH
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCe---eccccc----CEEEEeCCCCccCCcCC-ceEEEEeCC-------HH
Confidence 8899999999999999999998753 2222 111111 2778888 79998878 999999853 34
Q ss_pred HHHHHhhhccc-------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 280 IVDSIKGYLNI-------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 280 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+.+.+...... ....+++.+.++.+.++. +++..++.+++.+++.+.|.++|++.+...|..
T Consensus 231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 305 (399)
T 2oga_A 231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD 305 (399)
T ss_dssp HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 55555443221 113456666666666643 344566667788889999998888774334555
Q ss_pred eeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-----------CC------------CCeEEEEec--CCHH
Q 014631 347 SMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-----------GM------------KNWLRITFA--IEPS 401 (421)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~------------~~~iRi~~~--~~~e 401 (421)
+.++|+.++... .+..++...| .++||.+.++... +. .+.+|++++ ++++
T Consensus 306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e 380 (399)
T 2oga_A 306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP 380 (399)
T ss_dssp EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence 666653333211 1355666655 6689999875421 00 157999997 7999
Q ss_pred HHHHHHHHHHHHHHHhh
Q 014631 402 ALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 402 ~l~~~~~~l~~~~~~~~ 418 (421)
+++++++.|++++++++
T Consensus 381 di~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 381 QALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987754
No 139
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-31 Score=254.61 Aligned_cols=330 Identities=15% Similarity=0.139 Sum_probs=236.3
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
++.+.|+.|. .+.++.+.+++.+.... .|.+. ..+.++++.++++++...+ +++++|++|+|++++
T Consensus 4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~v~~~~g~t~a 71 (385)
T 2bkw_A 4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAAA--SKSQPFVLAGSGTLG 71 (385)
T ss_dssp CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCGG--GTCEEEEEESCTTHH
T ss_pred ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCCC--CCCceEEEcCchHHH
Confidence 4456676663 25667888777654322 22221 1356788888888865333 457899999999999
Q ss_pred HHHHHHHhc---CCCCeEEEc-CCCCcch-HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCc
Q 014631 122 IQVILTVLA---RPGANILLP-KPGFPLY-EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPC 195 (421)
Q Consensus 122 l~~~~~~l~---~~gd~Vl~~-~p~y~~~-~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~npt 195 (421)
+..++.++. ++||+|++. .+.|+.+ ...++..|++++.+++. +.++.+|++++++.+++ +++++++++|+|||
T Consensus 72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 150 (385)
T 2bkw_A 72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST 150 (385)
T ss_dssp HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence 999999997 899999887 4555555 36677889999998872 23456899999998876 78999999999999
Q ss_pred ccccCHHHHHHHHHHHHhc--CcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEEEeeCCC
Q 014631 196 GNVFTYQQLQKIAEKARKL--GIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWLVTSDPS 272 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~ 272 (421)
|.+++ +++|.++|++| |+++|+|++|+... ...++..+ +..+++.|+||+++ .+| +||+++++
T Consensus 151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~-- 216 (385)
T 2bkw_A 151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS-- 216 (385)
T ss_dssp TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH--
T ss_pred CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH--
Confidence 99987 77899999999 99999999997522 11222222 23478899999754 456 59999853
Q ss_pred cchhHHHHHH-HHh----------------------hhcc----cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHH
Q 014631 273 GILQELRIVD-SIK----------------------GYLN----ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTA 325 (421)
Q Consensus 273 ~~~~~~~~~~-~~~----------------------~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 325 (421)
++++ .+. .... ..++++...+.++.++++...+.++++..+++++++
T Consensus 217 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 217 ------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp ------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 2333 221 1111 123567777777777776422334778888999999
Q ss_pred HHHHHHh-hcCCCccccCCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-CCCeEEEE-ec
Q 014631 326 DICYDRI-KEIPCITCPRKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-MKNWLRIT-FA 397 (421)
Q Consensus 326 ~~~~~~l-~~~~g~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~iRi~-~~ 397 (421)
+++.+.| +++ ++.+. .+ ..++++|+.++ +..++...| .++||.+.+|..+. ..+++|++ ++
T Consensus 291 ~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~ 359 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG 359 (385)
T ss_dssp HHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred HHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccc
Confidence 9999999 887 77733 32 24678888875 245666665 56899999987653 25789999 65
Q ss_pred -----CCHHHHHHHHHHHHHHHHHh
Q 014631 398 -----IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 398 -----~~~e~l~~~~~~l~~~~~~~ 417 (421)
++++++++++++|+++++++
T Consensus 360 ~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 360 VTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp GGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred cccccCCHHHHHHHHHHHHHHHHhc
Confidence 48899999999999987543
No 140
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=1.1e-30 Score=253.66 Aligned_cols=325 Identities=15% Similarity=0.126 Sum_probs=223.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
+.++.+.+++. .. ...|.+..+..+||++++++++ .+++++|+||++|+..++++++++|| +++.
T Consensus 55 ~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~ 119 (456)
T 2ez2_A 55 AMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQGRGAENLLSQLAIKPGQ--YVAG 119 (456)
T ss_dssp CCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESSHHHHHHHHHHHHCCTTC--EEEE
T ss_pred cCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCCcHHHHHHHHHHhCCCCC--Eecc
Confidence 34566666654 22 2367777778899999999983 24799999999999999999999999 7888
Q ss_pred CCC-cchHHHHhhcCceeEeeeccCC----C----CccCCHHHHHhhhccCc----eEEEEeCCCC-CcccccCHHHHHH
Q 014631 141 PGF-PLYEANARHTRLEIRHFDLLPE----K----GWEVDLDGLEALADENT----VAMVIVNPGN-PCGNVFTYQQLQK 206 (421)
Q Consensus 141 p~y-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~d~e~l~~~~~~~~----~~i~~~~p~n-ptG~~~~~~~l~~ 206 (421)
|+| ..+...+...|++++.++++.+ + ++.+|++++++.+.+++ +++++++|+| |||.+++.+++++
T Consensus 120 ~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~ 199 (456)
T 2ez2_A 120 NMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRA 199 (456)
T ss_dssp SSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHH
T ss_pred ccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHH
Confidence 999 6668888899999999887632 2 36789999999887655 7888999998 9999999999999
Q ss_pred HHHHHHhcCcEEEEcccccc----------cccCCCCccccc-ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631 207 IAEKARKLGIMVISDEVYDH----------LTFGSTPYVRMG-VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 207 i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 275 (421)
|+++|++||+++|+||+|+. ..+.|....++. ......+++++ |++|. +++| ++||+++++
T Consensus 200 i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~kk~-~~~~-~gG~~~~~~----- 271 (456)
T 2ez2_A 200 VRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SGKKD-CLVN-IGGFLCMND----- 271 (456)
T ss_dssp HHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ETTTT-TCCS-SCEEEEESC-----
T ss_pred HHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eCccc-CCCC-ceeEEEECC-----
Confidence 99999999999999999986 344443221110 11111234544 78887 4566 789998843
Q ss_pred hHHHHHHHHhhhccc------ccCCchHHHHH-HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 276 QELRIVDSIKGYLNI------SSGPATFVQGA-VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 276 ~~~~~~~~~~~~~~~------~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
+++++.+...... ..+.+.....+ +...++... ++..++.+++.+++.+.|++. |+. +..|.+++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~~~~ 343 (456)
T 2ez2_A 272 --DEMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQVRYLGDKLKAA-GVP-IVEPVGGH 343 (456)
T ss_dssp --HHHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHHHHHHHHHHHT-TCC-BCSSCCSS
T ss_pred --HHHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHHHHHHHHHhcC-CCc-cccCCCce
Confidence 3455555433211 11223223222 222232111 344455566677788888875 777 44677888
Q ss_pred EEEEecCcccccCCCChHHH-----HHHHHhhcCeeEEe-CCCC------------CCCCeEEEEec---CCHHHHHHHH
Q 014631 349 FVMVKLNLSLLEGISDDMEF-----ALQLAKEESVIVLP-GMAV------------GMKNWLRITFA---IEPSALEEGL 407 (421)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gv~v~~-g~~~------------~~~~~iRi~~~---~~~e~l~~~~ 407 (421)
++|+.+.... ++ .+..++ ...|++++||.+.+ |..| ...+++|++++ ++++++++++
T Consensus 344 ~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~~~~~iRis~~~~~~t~e~i~~~~ 421 (456)
T 2ez2_A 344 AVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRPKLETVRLTIPRRVYTYAHMDVVA 421 (456)
T ss_dssp EEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTTCCHHHHHHHH
T ss_pred EEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccCCCCeEEEEeCCCCCCHHHHHHHH
Confidence 9998874200 00 022233 55555788998766 4322 11378999998 6899999999
Q ss_pred HHHHHHHHHhh
Q 014631 408 GRIKAFCQRHA 418 (421)
Q Consensus 408 ~~l~~~~~~~~ 418 (421)
++|++++++..
T Consensus 422 ~~l~~~l~~~~ 432 (456)
T 2ez2_A 422 DGIIKLYQHKE 432 (456)
T ss_dssp HHHHHHHHTGG
T ss_pred HHHHHHHhhhh
Confidence 99999987654
No 141
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=100.00 E-value=2.2e-31 Score=257.67 Aligned_cols=353 Identities=17% Similarity=0.090 Sum_probs=231.9
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|.+....+ ..+|.+.+++.+++.+. ..|....+..+.+..+++++.+..+. ...+++++|+||++|
T Consensus 59 ~g~~ylD~~~~~~~~~lG-h~~p~v~~A~~~~~~~~--~~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 134 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTTVG-NSAPKVVEAVRSQVGDF--THTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA 134 (451)
T ss_dssp TSCEEEESSHHHHTCTTC-TTCHHHHHHHHHHHTTC--SCCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred CCCEEEEcCCCccccccC-CCCHHHHHHHHHHHHhc--ccccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence 367889998875443222 45899999999998764 23544445567777777777776552 235789999999999
Q ss_pred HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCC--------CCcc---CCHHH
Q 014631 122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPE--------KGWE---VDLDG 174 (421)
Q Consensus 122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~d~e~ 174 (421)
+..+++.+.. .+++|++.+++|+++...+...+. .+..++.+.. +..+ .+++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 9999987753 348999999999988665544322 3344443210 0000 12333
Q ss_pred HHhhh----ccCceEEEEeCCCCCcc-c-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEE
Q 014631 175 LEALA----DENTVAMVIVNPGNPCG-N-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVIT 248 (421)
Q Consensus 175 l~~~~----~~~~~~i~~~~p~nptG-~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 248 (421)
+++.+ .++..++++++|.|++| . ..+.+.+++|.++|++||+++|+||+|+++.+.|... ....++...+++
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pdi~- 292 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMF-ACEHEGIDPDLI- 292 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccch-hhhhcCCCCCee-
Confidence 33333 33566777888866555 3 4567779999999999999999999999887666532 233333322233
Q ss_pred EcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHH
Q 014631 249 LGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTAD 326 (421)
Q Consensus 249 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~ 326 (421)
||||.++. |+|+||++++ +++++.+.... ..+.+.+++++.++.++|+... +...++.++..+..++
T Consensus 293 --t~sK~l~~-G~~iG~v~~~--------~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 361 (451)
T 3oks_A 293 --VTAKGIAG-GLPLSAVTGR--------AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKD 361 (451)
T ss_dssp --EECGGGGT-TSSCEEEEEE--------HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred --eehhhhhC-CcceEEEEEC--------HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 88999865 8999999986 45766665443 2356788999999888887422 2333444444444455
Q ss_pred HHHHHhhcCCCccccCCCCceeEEEEecCcccc--cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHH
Q 014631 327 ICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLL--EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSA 402 (421)
Q Consensus 327 ~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~ 402 (421)
.+.+.+.++|.+..+ +..|.++|+.+..... +.......+... +.++||.+.|+..| .+++|++++ .++++
T Consensus 362 ~L~~~~~~~~~~~~~--~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~ 436 (451)
T 3oks_A 362 RLGRLQAEDDRIGDV--RGRGAMIAMELVKAGTTEPDADLTKALCAG-AHAAGVIVLSCGTY--GNVVRFLPPLSIGDDL 436 (451)
T ss_dssp HHHHHHHHCTTEEEE--EEETTEEEEEEBSTTSCCBCHHHHHHHHHH-HHHTTEECEEECTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhhCCCeEEE--EEeeEEEEEEEecCccCCCCHHHHHHHHHH-HHhCCcEEecCCCC--CCEEEEECCCCCCHHH
Confidence 555555555555422 3336678877742100 000013345554 46779999997654 368999876 68999
Q ss_pred HHHHHHHHHHHHHH
Q 014631 403 LEEGLGRIKAFCQR 416 (421)
Q Consensus 403 l~~~~~~l~~~~~~ 416 (421)
+++++++|++++++
T Consensus 437 i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 437 LNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999864
No 142
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=3.8e-31 Score=255.21 Aligned_cols=349 Identities=13% Similarity=0.056 Sum_probs=225.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|......+ ..+|.+.+++.+++.+.....| +.....++++.+++++ + .+++|++++||+++
T Consensus 53 ~g~~ylD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~-~~~~v~~~~sGsea 123 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIITG-HAHPHITKAITTAAENGVLYGT-PTALEVKFAKMLKEAM------P-ALDKVRFVNSGTEA 123 (434)
T ss_dssp TCCEEEECCGGGTTCSSC-BTCHHHHHHHHHHHHHCSCCSS-CCHHHHHHHHHHHHHC------T-TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhCcCCCC-CCHHHHHHHHHHHHhC------C-CCCEEEEeCchHHH
Confidence 478899998886543322 3689999999999987533334 3434457777777765 2 47899999999999
Q ss_pred HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCce-eEeeeccCCCCc--------c----CCHHHHHhhhcc--Cce
Q 014631 122 IQVILTVLAR--PGANILLPKPGFPLYEANARHTRLE-IRHFDLLPEKGW--------E----VDLDGLEALADE--NTV 184 (421)
Q Consensus 122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~-~~~~~~~~~~~~--------~----~d~e~l~~~~~~--~~~ 184 (421)
+..+++.+.. ++++|++.+|+|+++...+...+.. ..........+. . -|++++++.+.+ ...
T Consensus 124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 203 (434)
T 3l44_A 124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV 203 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence 9999987754 6789999999999876555443322 111111100000 0 178999888763 334
Q ss_pred EEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 185 AMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 185 ~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++++| +|++|.+. +++.+++|.++|++||+++|+||+|+++ +.|... ....++...+ +.||||.++ +|+|
T Consensus 204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 277 (434)
T 3l44_A 204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLP 277 (434)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSS
T ss_pred EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcC
Confidence 4556666 45666655 8888999999999999999999999988 555432 2222222222 347899986 7999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+||++++ +++++.+... ...+.+.+++++.++.++++... +...++.++..+..++.+.+.+..++.
T Consensus 278 iG~~~~~--------~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 349 (434)
T 3l44_A 278 IGAYGGK--------KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNI 349 (434)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eeeEEEc--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999885 4677766552 12345788899999888887422 233333333333333444443333432
Q ss_pred ccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+. . .+..|.++++.+...... .......+... +.++||.+.|+.. +.+|+++..+++++++++++
T Consensus 350 ~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~~Gv~v~~~~~----~~~rl~~~~t~e~i~~~l~~ 422 (434)
T 3l44_A 350 DI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKL-MLQEGVNLAPSKY----EAWFLTTEHTKEDIEYTIEA 422 (434)
T ss_dssp CE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHH-HHHTTEECCSSTT----CCEECCTTCCHHHHHHHHHH
T ss_pred CE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHH-HHHCCeEEeecCC----CcEEEecccCHHHHHHHHHH
Confidence 22 1 233456777766421100 00011345554 4567999998752 56899877999999999999
Q ss_pred HHHHHHHhhhc
Q 014631 410 IKAFCQRHAKQ 420 (421)
Q Consensus 410 l~~~~~~~~~~ 420 (421)
|+++++++++.
T Consensus 423 l~~~l~~~~~~ 433 (434)
T 3l44_A 423 VGRAFAALADN 433 (434)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhc
Confidence 99999887653
No 143
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=100.00 E-value=4.3e-31 Score=254.71 Aligned_cols=335 Identities=14% Similarity=0.121 Sum_probs=223.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCC---------CCHHHHHHHHHHHhhhCCCCCCCCcEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSV---------GILPARRAIADYLNSELPCKLSPDDVY 113 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~---------g~~~l~~~ia~~l~~~~~~~~~~~~i~ 113 (421)
....++|+.+.+. ++++.+.+++.+.+... ..|+... ...++|+++++++ ++++++|+
T Consensus 16 ~~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~ 82 (432)
T 3a9z_A 16 PNRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDII 82 (432)
T ss_dssp --CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEE
T ss_pred CCCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEE
Confidence 3567888888754 67889999999988752 2333211 1358899999988 35678999
Q ss_pred EcCCHHHHHHHHHHHhc--------CCCCeEEEcCCCCcch-----------------HHHHhhcCceeEeeeccCCCCc
Q 014631 114 LTAGCKQAIQVILTVLA--------RPGANILLPKPGFPLY-----------------EANARHTRLEIRHFDLLPEKGW 168 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l~--------~~gd~Vl~~~p~y~~~-----------------~~~~~~~g~~~~~~~~~~~~~~ 168 (421)
+|+|+++++..++.++. ++||+|+++.|+|+.+ ...++..|.+++.++++++ ++
T Consensus 83 ~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~ 161 (432)
T 3a9z_A 83 FTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NG 161 (432)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TS
T ss_pred EeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cC
Confidence 99999999999999885 5899999999999765 3344557899999987642 34
Q ss_pred cCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC----------cEEEEcccccccccCCCCccccc
Q 014631 169 EVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG----------IMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 169 ~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~ 238 (421)
.+|++++++.++++++++++++|+||||.+++ +++|.++|+++| +++|+|++|+.+. ....+.
T Consensus 162 ~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~ 234 (432)
T 3a9z_A 162 QVEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVE 234 (432)
T ss_dssp SCCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHH
T ss_pred CcCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChh
Confidence 68999999999888999999999999999988 467888899999 9999999997632 222232
Q ss_pred ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--------cccccCCchHHHHHHHHHhhccc
Q 014631 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--------LNISSGPATFVQGAVPQIFKNTK 310 (421)
Q Consensus 239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~~~~ 310 (421)
..+.+ +++.|+||++| .|+||+++++... ...+... ....++++...+.++.++++..
T Consensus 235 ~~~~d---~~~~s~~K~~g---~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~- 300 (432)
T 3a9z_A 235 DLGVD---FLTIVGHKFYG---PRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV- 300 (432)
T ss_dssp HHCCS---EEEEEGGGTTC---CSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-
T ss_pred hcCCC---EEEEehhHhcC---CcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-
Confidence 23322 56889999863 5699999964210 1111111 1122456777777777777642
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631 311 EDFFSKIVDILRDTADICYDRIKEIPCITCP-RKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 311 ~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~ 384 (421)
..++++..++++++++++.+.|++++|+.+. ..| ..+...++.++... .+..++...+ .++.+.+|.
T Consensus 301 ~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~ 373 (432)
T 3a9z_A 301 SENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGA 373 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSC
T ss_pred HhhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEeccc
Confidence 3467888899999999999999876554321 122 12234555554310 1244444432 367776665
Q ss_pred CC---------------CC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 385 AV---------------GM-----KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 385 ~~---------------~~-----~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+ +. .+++|++++ ++++++++++++|+++++++++
T Consensus 374 ~~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 374 SCHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp GGGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred cccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 33 21 378999998 4899999999999999987754
No 144
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.98 E-value=9e-32 Score=253.11 Aligned_cols=323 Identities=14% Similarity=0.109 Sum_probs=226.3
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCC---CCC----CHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSP---SVG----ILPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~---~~g----~~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
.+++++.|. .++|+.+++++.+.+... ....|.. ..+ ..++++.+++++ |.. ++++|++
T Consensus 3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g~~-~~~~v~~ 71 (360)
T 1w23_A 3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELL----QIP-NDYQILF 71 (360)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHH----TCC-TTEEEEE
T ss_pred ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCceEEE
Confidence 467777774 267789999999887542 0111211 122 335555555555 432 3579999
Q ss_pred cCCH-HHHHHHHHHHhcCC---CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHh-hhccCceEEEEe
Q 014631 115 TAGC-KQAIQVILTVLARP---GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEA-LADENTVAMVIV 189 (421)
Q Consensus 115 ~~g~-~~al~~~~~~l~~~---gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~-~~~~~~~~i~~~ 189 (421)
|+|+ ++++..++..+..+ ||.|+++.++|.. ...++..| +++.++++++++ .+|++++++ .+++++++++++
T Consensus 72 ~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~ 148 (360)
T 1w23_A 72 LQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHIT 148 (360)
T ss_dssp ESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEE
T ss_pred ECCcchHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEe
Confidence 9998 99999999888765 5677777776654 34466789 999998864333 378899998 888889999999
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
+|+||||.+++ ++ +++||+++|+|++|+.+.. ..++..+ + ++++|+||.|+++| +||++++
T Consensus 149 ~~~nptG~~~~--~i------~~~~~~~li~D~a~~~~~~----~~~~~~~---d--i~~~s~sK~~~~~G--~G~~~~~ 209 (360)
T 1w23_A 149 SNNTIYGTQYQ--NF------PEINHAPLIADMSSDILSR----PLKVNQF---G--MIYAGAQKNLGPSG--VTVVIVK 209 (360)
T ss_dssp SEETTTTEECS--SC------CCCCSSCEEEECTTTTTSS----CCCGGGC---S--EEEEETTTTTSCTT--CEEEEEE
T ss_pred CCCCCcceecc--cc------cccCCceEEEechhhcCCC----CcCcccC---C--EEEEEcccccCCCC--cEEEEEc
Confidence 99999999987 33 2379999999999987432 1233333 1 78899999998666 8999986
Q ss_pred CCCcchhHHHHHHHHhhhc-------------ccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcC
Q 014631 270 DPSGILQELRIVDSIKGYL-------------NISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
+ ++++.+.... ...++++...+.++..+++...+. ++++..++++++++++.+.|+++
T Consensus 210 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 281 (360)
T 1w23_A 210 K--------DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDES 281 (360)
T ss_dssp H--------HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred H--------HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc
Confidence 3 3444333221 112456667777777777542233 67888999999999999999988
Q ss_pred CCc-cccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 336 PCI-TCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 336 ~g~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
+++ .....| .+++++|+.++... +..+++.+ +.++||.+.+|..+ .+++|++++ ++++++++++++|
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-l~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l 353 (360)
T 1w23_A 282 NGFYVGHAEKGSRSLMNVTFNLRNEE-----LNQQFLAK-AKEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELM 353 (360)
T ss_dssp TTSSEESSCGGGBCSSEEEEECSSHH-----HHHHHHHH-HHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHH
T ss_pred cCcccccCCchhccCcEEEEEcCCCc-----cHHHHHHH-HHHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHH
Confidence 655 421123 23558888886321 23456655 46789999988754 578999998 6899999999999
Q ss_pred HHHHHH
Q 014631 411 KAFCQR 416 (421)
Q Consensus 411 ~~~~~~ 416 (421)
++++++
T Consensus 354 ~~~~~~ 359 (360)
T 1w23_A 354 IQFKEN 359 (360)
T ss_dssp HHHHHH
T ss_pred HHHHhh
Confidence 998764
No 145
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.98 E-value=5.6e-30 Score=246.21 Aligned_cols=335 Identities=16% Similarity=0.169 Sum_probs=238.0
Q ss_pred cCCCCee--eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC-CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 41 NDPRPII--PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP-SVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 41 ~~~~~~i--~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~-~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.+|.+++ +|+.|.|. ++.|+.+.+++.+.+... .|++ ..+..++|++++++++ .+++++|+|
T Consensus 11 ~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~g 75 (424)
T 2po3_A 11 FGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATCN 75 (424)
T ss_dssp GTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEESC
T ss_pred hcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeCC
Confidence 3456655 68888876 567889999999988763 4776 6778999999999984 258999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCccc
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGN 197 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~ 197 (421)
+++++..++.++. +||+|++++|+|+++...+...|++++.+++++ +++.+|++++++.+++++++|+++ ||||.
T Consensus 76 gt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~---~~tG~ 150 (424)
T 2po3_A 76 ATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGV---HLWGR 150 (424)
T ss_dssp HHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEE---CGGGC
T ss_pred HHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEE---CCCCC
Confidence 9999999999885 789999999999999999999999999998864 356789999999998888888775 48998
Q ss_pred ccCHHHHHHHHHHHHhcCcEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchh
Q 014631 198 VFTYQQLQKIAEKARKLGIMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQ 276 (421)
Q Consensus 198 ~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 276 (421)
. .++++|.++|+++|+++|+|++|+ ++.+.+. ++..+. + +++.||||.++++|.|+||+++++
T Consensus 151 ~---~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~---~~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~------ 214 (424)
T 2po3_A 151 P---CAADQLRKVADEHGLRLYFDAAHALGCAVDGR---PAGSLG---D-AEVFSFHATKAVNAFEGGAVVTDD------ 214 (424)
T ss_dssp C---CCHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS---S-EEEEECCTTSSSCCSSCEEEEESC------
T ss_pred c---CCHHHHHHHHHHcCCEEEEECccccCCeECCe---eccccc---C-EEEEeCCCCCCccCCCCeEEEeCC------
Confidence 7 678999999999999999999999 4555442 222222 2 888999966667778999999863
Q ss_pred HHHHHHHHhhhccc-c---c------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 277 ELRIVDSIKGYLNI-S---S------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 277 ~~~~~~~~~~~~~~-~---~------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
+++++.+...... . . ....+.+.++..++.. ...+++..++.+++++++.+.|+++|++.+...|.+
T Consensus 215 -~~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 291 (424)
T 2po3_A 215 -ADLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDRH 291 (424)
T ss_dssp -HHHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGGG
T ss_pred -HHHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 3455655543221 0 0 0101122222222221 244667778888888999999998888873322433
Q ss_pred e----eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--------------CC-------CeEEEEec--CC
Q 014631 347 S----MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--------------MK-------NWLRITFA--IE 399 (421)
Q Consensus 347 ~----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~~-------~~iRi~~~--~~ 399 (421)
+ .++++.++.... + .+..++.. .+.++||.+.+..... .+ ..+|+++. ++
T Consensus 292 ~~~~~~~~~i~~~~~~~-~-~~~~~l~~-~L~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~t 368 (424)
T 2po3_A 292 GLNNHQYVIVEIDEATT-G-IHRDLVME-VLKAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAIG 368 (424)
T ss_dssp SCCCCCCEEEEECHHHH-S-SCHHHHHH-HHHHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTCC
T ss_pred CccccEEEEEEECCccc-h-hhHHHHHH-HHHHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCCC
Confidence 3 233355552100 0 13555655 4577899998732100 01 12777643 78
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014631 400 PSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~ 417 (421)
+++++++++.|.+++++.
T Consensus 369 ~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 369 DDDIRRVADLLRLCATRG 386 (424)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhh
Confidence 999999999999988664
No 146
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.98 E-value=1.4e-31 Score=251.99 Aligned_cols=325 Identities=13% Similarity=0.113 Sum_probs=227.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCC-c-EEE
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYSPSVGILPARRAIADYLNSELPCKLSPD-D-VYL 114 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~-~-i~~ 114 (421)
.++.++.|. .+.|+.+++++.+.+.+.. ...|. ....++++.+++.+.+.+|. +++ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRG--AVYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTS--HHHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCc--HHHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 455666553 3788999999998875320 01121 12345666777777776663 443 5 578
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCcc--CCHHHHHhhhccCceEEEEeC
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWE--VDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~--~d~e~l~~~~~~~~~~i~~~~ 190 (421)
|+|++++++.++.+++++||+|++.++.|++. ...++..| +++.++.+.+.+++ +|.++++ ++++++++++++
T Consensus 74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~ 150 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS 150 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence 89999999999999999999999887766553 45667789 99999876322233 4655543 677899999999
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
|+||||..++ ++++| +|+++|+|++|+.+. ...++..+ .+++.|+||+++++| +||+++++
T Consensus 151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~----~~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~ 211 (362)
T 2c0r_A 151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILS----RPFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE 211 (362)
T ss_dssp EETTTTEECS--SCCCC------TTSCEEEECTTTTTS----SCCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred CcCccceecc--ccccc------CCCEEEEEChhhccC----CccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence 9999999754 35554 899999999998743 12223222 277789999998788 89999964
Q ss_pred CCcchhHHHHHHHHhh-------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 271 PSGILQELRIVDSIKG-------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
. +.+.+.. .....++++...+.++.++++...+. ++++++++++++++++.+.|++++
T Consensus 212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 2222211 11223477888888888888753333 688899999999999999999884
Q ss_pred Cc-cccCCC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHH
Q 014631 337 CI-TCPRKP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIK 411 (421)
Q Consensus 337 g~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~ 411 (421)
++ .+...+ ..+.++++.++... +..+++.. |.++||.+.+|..+ .+++|+|++ +++++++++++.|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-L~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 284 GFYRGCVDVDSRSDMNITFRLASEE-----LEKEFVKA-SEQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp TSSEESSCGGGBCSSEEEEECSCHH-----HHHHHHHH-HHHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CccccCCChHHcCCcEEEEEcCCcc-----hHHHHHHH-HHHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35 532111 13445677775311 24566665 46779999888765 467999998 58999999999999
Q ss_pred HHHHHh
Q 014631 412 AFCQRH 417 (421)
Q Consensus 412 ~~~~~~ 417 (421)
++++++
T Consensus 356 ~~~~~~ 361 (362)
T 2c0r_A 356 HFKRSR 361 (362)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998765
No 147
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.98 E-value=4e-31 Score=255.73 Aligned_cols=342 Identities=11% Similarity=0.060 Sum_probs=231.8
Q ss_pred CCC--CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCC
Q 014631 42 DPR--PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAG 117 (421)
Q Consensus 42 ~~~--~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g 117 (421)
.|+ +++||..|......+ ..+|.+.+++.+++++.... .+.+.....+|++.+++++ + ...++|++++|
T Consensus 71 dG~~~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~~~~~~L~e~la~~~----~--~~~~~v~~~~s 143 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIHG-HGHPALDQALTTQLRVMNHVMFGGLTHEPAARLAKLLVDIT----P--AGLDTVFFSDS 143 (457)
T ss_dssp TTEEEEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCSCCCSSSEECHHHHHHHHHHHHHS----S--TTEEEEEEESS
T ss_pred CCCeeEEEECCCcHhhhccC-CCCHHHHHHHHHHHHhccCccccccCCHHHHHHHHHHHHhC----C--CCcCEEEEeCc
Confidence 467 889998774332222 37899999999998863211 1112222345555555554 2 45679999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEEcCCCCcchHHHHhhcCc--------------eeEeeeccCCCCccCCHHHH
Q 014631 118 CKQAIQVILTVLAR-------PG-ANILLPKPGFPLYEANARHTRL--------------EIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 118 ~~~al~~~~~~l~~-------~g-d~Vl~~~p~y~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~d~e~l 175 (421)
+++|++.+++.+.+ +| +.|++.+++|+++...+...+. ++..++.+.......|++++
T Consensus 144 GseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~l 223 (457)
T 3tfu_A 144 GSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAF 223 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHH
Confidence 99999999988764 66 5899999999987655554421 22333332221112478899
Q ss_pred Hhhhc---cCceEEEEeC-CCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 176 EALAD---ENTVAMVIVN-PGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 176 ~~~~~---~~~~~i~~~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
++.++ ++++++++.. ++|++|..+ +++.+++|.++|++||+++|+||+|+++.+.|..+ .+..++...+++
T Consensus 224 e~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii--- 299 (457)
T 3tfu_A 224 EAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM--- 299 (457)
T ss_dssp HHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---
T ss_pred HHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE---
Confidence 88886 4566666666 689999876 77889999999999999999999999987766532 222333333333
Q ss_pred ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-----c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHH
Q 014631 251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-----L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDT 324 (421)
Q Consensus 251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 324 (421)
||||.++.+.+|+||++++ +++++.+... . ..+.+.++++++++.++|+...+ ++..++++++
T Consensus 300 t~sK~l~gG~~~lG~v~~~--------~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~~ 368 (457)
T 3tfu_A 300 CVGKALTGGYLSLAATLCT--------ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITEL 368 (457)
T ss_dssp EECGGGGTTSSCCEEEEEE--------HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHHH
T ss_pred EEChhhhCCCcceEEEEEc--------HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence 8999865433799999996 4677777421 1 23457889999998888864222 2344555566
Q ss_pred HHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631 325 ADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE 399 (421)
Q Consensus 325 ~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~ 399 (421)
.+++.+.|+++ |++..+ +..|.++++.++.. .+..++...+ .++||.+.|. .+++|++++ .+
T Consensus 369 ~~~l~~~L~~l~~~~~v~~v--r~~G~~~~i~l~~~-----~~~~~~~~~l-~~~Gv~v~~~-----~~~lRi~p~~~~t 435 (457)
T 3tfu_A 369 AAGLTAGLDTARALPAVTDV--RVCGAIGVIECDRP-----VDLAVATPAA-LDRGVWLRPF-----RNLVYAMPPYICT 435 (457)
T ss_dssp HHHHHHHHGGGGGSTTEEEE--EECSSCEEEEESSC-----CCHHHHHHHH-HHTTEECCCB-----TTEEEECCCTTCC
T ss_pred HHHHHHHHHHHhcCCCeeee--ecCCeEEEEEECCc-----ccHHHHHHHH-HHCCeEEEec-----CCEEEEECCCCCC
Confidence 66666666653 444422 23466788888642 1356666665 5569999874 368999976 69
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 014631 400 PSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~~ 418 (421)
++++++++++|+++++++.
T Consensus 436 ~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 436 PAEITQITSAMVEVARLVG 454 (457)
T ss_dssp HHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999998764
No 148
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.98 E-value=3.3e-30 Score=250.66 Aligned_cols=349 Identities=17% Similarity=0.121 Sum_probs=235.8
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.+++||..|......+ ..+|.+.+++.+++++.. .+....+..+.+..+++++.+..+ .+.++|++++||++|
T Consensus 52 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~l~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 126 (476)
T 3i5t_A 52 DGRRLIDGPAGMWCAQVG-YGRREIVDAMAHQAMVLP--YASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGSTA 126 (476)
T ss_dssp TCCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCC--CCCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhcc--CcccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHHH
Confidence 478899998885332222 368999999999998732 121224456888888888888665 345799999999999
Q ss_pred HHHHHHHhcC-------C-CCeEEEcCCCCcchHHHHhhcCcee-------------EeeeccC--CCCccCC-------
Q 014631 122 IQVILTVLAR-------P-GANILLPKPGFPLYEANARHTRLEI-------------RHFDLLP--EKGWEVD------- 171 (421)
Q Consensus 122 l~~~~~~l~~-------~-gd~Vl~~~p~y~~~~~~~~~~g~~~-------------~~~~~~~--~~~~~~d------- 171 (421)
+..+++.+.+ + +++|++.+++|+++...+...+... ..++.+. .. +..+
T Consensus 127 ~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~~ 205 (476)
T 3i5t_A 127 VDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHA-GNRSQEAFLDD 205 (476)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGC-TTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCccccc-CCCchHHHHHH
Confidence 9999998753 3 4799999999999876655443321 1222110 01 1122
Q ss_pred -HHHHHhhhc----cCceEEEEeCCCCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc-ccCCCC
Q 014631 172 -LDGLEALAD----ENTVAMVIVNPGNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG-VFGSTV 244 (421)
Q Consensus 172 -~e~l~~~~~----~~~~~i~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~ 244 (421)
+++|++.+. ++++++++..++|++|. +++++.+++|.++|++||+++|+||+|+++.+.|..+ ... .++...
T Consensus 206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~p 284 (476)
T 3i5t_A 206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVP 284 (476)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCc
Confidence 678888775 33455555555778885 7788999999999999999999999999987777532 222 333222
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhHHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
+++ ++||.++ +| +|+|+++++ +++++.+... . ..+.+.++++++++.++|+...+ +
T Consensus 285 di~---t~sK~l~-~G~~plg~v~~~--------~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~ 349 (476)
T 3i5t_A 285 DII---TFAKGVT-SGYVPLGGLAIS--------EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---E 349 (476)
T ss_dssp SEE---EECGGGG-TTSSCCEEEEEC--------HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---T
T ss_pred chh---hhhhhhc-CCCcCeEEEEEC--------HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---H
Confidence 333 6889976 48 999999995 4677777653 1 23557889999999998874222 2
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCccccCCCCceeEEEEecCcccccCCC------ChHHHHHHHHhhcCeeEEeCCCC
Q 014631 316 KIVDILRDTADICYDRIKEI---PCITCPRKPEGSMFVMVKLNLSLLEGIS------DDMEFALQLAKEESVIVLPGMAV 386 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~~ 386 (421)
+..++++++.+++.+.|+++ |.+..+ . ..|.++++.+......... ....+...+ .++||.+.|..
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~~v-~-~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-- 424 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVAET-R-SVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG-- 424 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEEEE-E-EETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeEEE-E-ecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC--
Confidence 34555666666666666643 444322 2 3355767777532100000 023455544 56799999842
Q ss_pred CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 387 GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 387 ~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
+++|++++ .+++++++++++|+++++++.++
T Consensus 425 ---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~~ 457 (476)
T 3i5t_A 425 ---DLCVISPPLIISRAQIDEMVAIMRQAITEVSAA 457 (476)
T ss_dssp ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 78999965 89999999999999999887543
No 149
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.98 E-value=1.3e-29 Score=241.46 Aligned_cols=318 Identities=14% Similarity=0.073 Sum_probs=214.8
Q ss_pred eccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHH
Q 014631 48 PLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVI 125 (421)
Q Consensus 48 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~ 125 (421)
+++.|.|......+..+.+.+++..+........|. +.....++++.++++++ .+ +.+++++|++++..+
T Consensus 24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g------~~--~~i~~~sG~~a~~~~ 95 (398)
T 2rfv_A 24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLER------GE--AGLATASGISAITTT 95 (398)
T ss_dssp TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHH
T ss_pred CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhC------CC--cEEEECCHHHHHHHH
Confidence 467777664333334455555544211111122333 34455678888888773 22 556666677999999
Q ss_pred HHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 126 LTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 126 ~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
+.++.++||+|+++.|+|+++...+ ...|.+++.++.+ |++++++.++++++++++++|+||||.+++
T Consensus 96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 167 (398)
T 2rfv_A 96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD- 167 (398)
T ss_dssp HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence 9999999999999999999887766 7789998888752 789999999888999999999999999986
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRI 280 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~ 280 (421)
+++|.++|++||+++|+|++|+.+.+. . ++ .++ ..+++.|+||+|+++|.|+ ||+++++ ++
T Consensus 168 --l~~i~~l~~~~~~~li~De~~~~~~~~-~---~~-~~~---~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~ 229 (398)
T 2rfv_A 168 --IETVAGIAHQQGALLVVDNTFMSPYCQ-Q---PL-QLG---ADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF 229 (398)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTCTTTC-C---GG-GGT---CSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccC-C---ch-hhC---CcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence 899999999999999999999976542 1 22 222 3488899999999999998 9999863 34
Q ss_pred HH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC--------------CCccccCC
Q 014631 281 VD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI--------------PCITCPRK 343 (421)
Q Consensus 281 ~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--------------~g~~~~~~ 343 (421)
++ .+...... ..+.+++.+.++..+++. .....++..++.+.+.+.|++. |++.+. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 303 (398)
T 2rfv_A 230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q 303 (398)
T ss_dssp HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence 44 45444332 346778888888888864 2233334455556666666553 233311 1
Q ss_pred C---CceeEEEEecCcccccCCCChHHHHHHHHhh---cCeeEEeCCCCC----------------------C-CCeEEE
Q 014631 344 P---EGSMFVMVKLNLSLLEGISDDMEFALQLAKE---ESVIVLPGMAVG----------------------M-KNWLRI 394 (421)
Q Consensus 344 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gv~v~~g~~~~----------------------~-~~~iRi 394 (421)
| ..+.++++.++. .......++++ .|+.+.+|..+. . ++.+|+
T Consensus 304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl 375 (398)
T 2rfv_A 304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL 375 (398)
T ss_dssp HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 1 235566667762 11223334433 378888885531 1 578999
Q ss_pred Eec--CCHHHHHHHHHHHHHH
Q 014631 395 TFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 395 ~~~--~~~e~l~~~~~~l~~~ 413 (421)
|++ +++++++.+.+.|+++
T Consensus 376 s~~~~~~~~~i~~l~~al~~~ 396 (398)
T 2rfv_A 376 SVGLEDPEDIINDLEHAIRKA 396 (398)
T ss_dssp ECCSSCHHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHhh
Confidence 998 5677887777777653
No 150
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.98 E-value=2e-30 Score=250.98 Aligned_cols=349 Identities=11% Similarity=0.062 Sum_probs=224.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|.+....+ ..+|.+.+++.+++.+.. .|....+..+.++++++++.+..+ ...++|++|+||++|
T Consensus 42 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGseA 116 (448)
T 3dod_A 42 NGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAEA 116 (448)
T ss_dssp TSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHHH
Confidence 478899998886443333 358999999999987642 233334445777777777777654 345799999999999
Q ss_pred HHHHHHHhcC----CC----CeEEEcCCCCcchHHHHhhcCce-------------eEeeeccCCCCcc-----------
Q 014631 122 IQVILTVLAR----PG----ANILLPKPGFPLYEANARHTRLE-------------IRHFDLLPEKGWE----------- 169 (421)
Q Consensus 122 l~~~~~~l~~----~g----d~Vl~~~p~y~~~~~~~~~~g~~-------------~~~~~~~~~~~~~----------- 169 (421)
+..+++.+.+ +| |+|++.+|+|+++...+...+.. +..++.+ +.+.
T Consensus 117 ~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 194 (448)
T 3dod_A 117 MEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIP--YVYRSESGDPDECRD 194 (448)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCC--CCTTSSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCC--ccccCCccchhhhhH
Confidence 9999998865 44 99999999999876554433321 2222221 1111
Q ss_pred CCHHHHHhhhc--cCceEEEEeCC-C-CCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 170 VDLDGLEALAD--ENTVAMVIVNP-G-NPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 170 ~d~e~l~~~~~--~~~~~i~~~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
.|+++|++.+. ++..++++++| + |++|. .++++.+++|.++|++||+++|+||+|+++.+.|... ....++...
T Consensus 195 ~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~~ 273 (448)
T 3dod_A 195 QCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQP 273 (448)
T ss_dssp HHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCCC
Confidence 14788888876 23334445555 5 78885 4677889999999999999999999999887666543 222233222
Q ss_pred CEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhh-------hc-ccccCCchHHHHHHHHHhhccc-hhHH
Q 014631 245 PVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKG-------YL-NISSGPATFVQGAVPQIFKNTK-EDFF 314 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~~~l~~~~-~~~~ 314 (421)
+ +.+|||.++ +| +|+||++++ +++++.+.. .. ..+.+.+++++.++.++|+... +...
T Consensus 274 d---i~t~sK~l~-~G~~~ig~v~~~--------~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 341 (448)
T 3dod_A 274 D---LMAAGKGIT-GGYLPIAVTFAT--------EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIV 341 (448)
T ss_dssp S---EEEECGGGG-TTSSCCEEEEEE--------HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred C---EEEeccccc-CCcCceEEEEEC--------HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHH
Confidence 2 337899986 48 599999996 467777765 22 2345778899999988887432 2334
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccC--CCC----hHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 315 SKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEG--ISD----DMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 315 ~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~----~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
++.++..+..++.+.+ +.++|.+. . .+..|.++|+.++...... ... ..++...+ .++||.+.|+
T Consensus 342 ~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~----- 412 (448)
T 3dod_A 342 EQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKM-RELGMLTRPL----- 412 (448)
T ss_dssp HHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECCEE-----
T ss_pred HHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHH-HHCCcEEecc-----
Confidence 4444444445555555 55554443 2 2234668888876421000 000 24566655 5679999987
Q ss_pred CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 389 KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 389 ~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+++|++++ .+++++++++++|++++++..+
T Consensus 413 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 413 GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 278999765 8999999999999999987643
No 151
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.98 E-value=1.9e-30 Score=251.32 Aligned_cols=348 Identities=14% Similarity=0.136 Sum_probs=232.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC-CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS-VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~-~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
.+..++||..|.+....++ .++.+.+++.+++.+.. +... .+..++++.+++.+.+.++ .++++|++|+|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGH-TRKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCB-SCHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 3678899987764433333 38999999999987632 1111 2334556666666665544 46789999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEEcCCCCcchHH-HHhhcCc------------eeEeeeccC--CCC-ccCC-----
Q 014631 121 AIQVILTVLAR--------PGANILLPKPGFPLYEA-NARHTRL------------EIRHFDLLP--EKG-WEVD----- 171 (421)
Q Consensus 121 al~~~~~~l~~--------~gd~Vl~~~p~y~~~~~-~~~~~g~------------~~~~~~~~~--~~~-~~~d----- 171 (421)
|++.+++.+.. +||+|++.+|+|+++.. .....|. ++..++.+. ..+ .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 99999988754 67999999999998743 3333331 233444321 111 1245
Q ss_pred ---HHHHHhhhcc---CceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 172 ---LDGLEALADE---NTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 172 ---~e~l~~~~~~---~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
++++++.+++ ....+++++| +|+||. ..+.+.+++|.++|++||+++|+||+|+++.+.|... .+..++..
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~ 280 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSMF-GADSFGVT 280 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcch-hhhhcCCC
Confidence 8999988862 2334556777 477997 5578999999999999999999999998776555421 22222222
Q ss_pred CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhh---------c-ccccCCchHHHHHHHHHhhccchh
Q 014631 244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGY---------L-NISSGPATFVQGAVPQIFKNTKED 312 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~~~~l~~~~~~ 312 (421)
.+++ |+||.++. | +|+||++++ +++++.+... . ..+.+.+++++.++.++++...+
T Consensus 281 ~di~---s~sK~l~~-G~~~~G~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 281 PDLM---CIAKQVTN-GAIPMGAVIAS--------TEIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEE--------HHHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCEE---EEcccccC-CCCceEEEEEC--------HHHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence 2233 88999874 7 999999986 3567776553 1 22446788888888888864222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 313 FFSKIVDILRDTADICYDRIKEIPCITCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
++..++++++++++.+.|++++.+..+ ..+..|+++|+.++........+..++...++ ++||.+.|+. ++
T Consensus 348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~g-----~~ 419 (449)
T 3a8u_X 348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDGDAIVRPFEAGMALW-KAGFYVRFGG-----DT 419 (449)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTTBSSHHHHHHHHHHH-HHTEECEEET-----TE
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcccccccHHHHHHHHH-HCCcEEecCC-----CE
Confidence 245667778888888888765323211 01334678898886421000001225666654 5699999972 78
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|++++ .+++++++++++|+++++++
T Consensus 420 iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 420 LQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 999975 89999999999999998765
No 152
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.97 E-value=6.2e-30 Score=251.77 Aligned_cols=329 Identities=11% Similarity=0.081 Sum_probs=236.8
Q ss_pred HHHHHHHHHHHhc---CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcE--EEcCCHHHHHHHHHHHhcCCC-----
Q 014631 64 PVAADAVVDAVRS---AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDV--YLTAGCKQAIQVILTVLARPG----- 133 (421)
Q Consensus 64 ~~v~~a~~~~~~~---~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i--~~~~g~~~al~~~~~~l~~~g----- 133 (421)
+.+.+++.+.+.. .+...|....+..++++.+++++.+.+|.+.+++++ ++|+|+++++..+++++.++|
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g 189 (514)
T 3mad_A 110 EHHIAFLNEVYALQSQSNPLHPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKG 189 (514)
T ss_dssp HHHHHHHHHHHHHHTTCCTTCTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHhhcCCcccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcC
Confidence 4444444444432 122344444556788999989998888866555788 999999999999999987766
Q ss_pred ---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014631 134 ---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 134 ---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~ 210 (421)
|+|+++.++|.++...+...|.+++.++.+. ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++
T Consensus 190 ~~~d~Vi~~~~~~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l 264 (514)
T 3mad_A 190 ITAPEAVVPVSAHAAFDKAAQYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAAL 264 (514)
T ss_dssp CSSCEEEEETTSCTHHHHHHHHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHH
T ss_pred CCCCeEEEeCccchHHHHHHHHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHH
Confidence 9999999999999999999999999998764 5679999999999989999999999999999966 7899999
Q ss_pred HHhcCcEEEEccccccccc-----CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHh
Q 014631 211 ARKLGIMVISDEVYDHLTF-----GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIK 285 (421)
Q Consensus 211 ~~~~~~~li~De~~~~~~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~ 285 (421)
|++||+++|+|++|+++.+ .|.....+. ....+..+++.|++|+ +.+|.++|+++++++ ......
T Consensus 265 a~~~~i~livDea~~~~~~~~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~~--------~~~~~~ 334 (514)
T 3mad_A 265 AAEHGIGCHVDACLGGFILPWAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRRP--------DLLHYQ 334 (514)
T ss_dssp HHHHTCEEEEECTTTTTTHHHHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESSH--------HHHTTT
T ss_pred HHHhCCeEEEecccccccchhHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeCH--------HHhccc
Confidence 9999999999999998653 122111221 1112234778899999 466788999998641 222111
Q ss_pred hhc------------ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEe
Q 014631 286 GYL------------NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVK 353 (421)
Q Consensus 286 ~~~------------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~ 353 (421)
... ...++.+.....++..++......++++..++.+++++++.+.|++++++.++ .+..+ ++++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~ 412 (514)
T 3mad_A 335 YFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVA 412 (514)
T ss_dssp CEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEE
T ss_pred cccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEe
Confidence 100 00123333333334444443335677888999999999999999998888844 44433 66665
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHHhhh
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+. .+..++...| .++||.+ +|..+ ++.+|++++ .+++++++++++|+++++++.+
T Consensus 413 ~~~------~~~~~l~~~L-~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 413 SDE------LNIYQVMEEM-AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp CSS------SCHHHHHHHH-HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred CCC------CCHHHHHHHH-HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 532 1456676665 5669988 54433 578999987 4569999999999999987754
No 153
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=4.2e-30 Score=247.36 Aligned_cols=332 Identities=16% Similarity=0.180 Sum_probs=220.6
Q ss_pred CCCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcCCC--CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSAEF--DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|..++||..|.+. ..++ .+|.+.+++.+++++... ..| +.....++++.+++++ | .+++++++|+
T Consensus 63 ~G~~ylD~~~g~~~--~~lgh~~p~v~~ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----g----~~~v~~~~sG 131 (433)
T 1z7d_A 63 NDKRYYDFLSAYSS--VNQGHCHPNILNAMINQAKNLTICSRAF-FSVPLGICERYLTNLL----G----YDKVLMMNTG 131 (433)
T ss_dssp TCCEEEESSHHHHT--TTTCBTCHHHHHHHHHHHTTCSCCCTTS-EEHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred CCCEEEEcccchhh--cccCCCCHHHHHHHHHHHHhCCCccCCc-CCHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence 36778888876433 1234 789999999999876321 112 2222345666666655 2 5799999999
Q ss_pred HHHHHHHHHHhc---------CCC-CeEEEcCCCCcchHHHH-hhcC------------ceeEeeeccCCCCccCCHHHH
Q 014631 119 KQAIQVILTVLA---------RPG-ANILLPKPGFPLYEANA-RHTR------------LEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 119 ~~al~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~~~-~~~g------------~~~~~~~~~~~~~~~~d~e~l 175 (421)
++|+..+++.+. .+| |+|++.+|+|+++...+ ...| .++..++. .|++++
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 204 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL 204 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998753 467 99999999999865433 3223 12333332 289999
Q ss_pred Hhhh-ccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccc
Q 014631 176 EALA-DENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSM 252 (421)
Q Consensus 176 ~~~~-~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 252 (421)
++.+ .++++++ +++| +|++|.+ ++++++++|.++|++||+++|+||+|+++.+.|... .+...+...+++ ||
T Consensus 205 e~~l~~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t~ 279 (433)
T 1z7d_A 205 EEELKDPNVCAF-IVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LL 279 (433)
T ss_dssp HHHHTSTTEEEE-EECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred HHHhCCCCEEEE-EEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---EE
Confidence 9988 4556554 5566 5778975 688899999999999999999999999876655432 222222222232 89
Q ss_pred ccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631 253 SKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 253 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
||.++ +| +|+||++++ +++++.+.... ..+.+.+++++.++.++|+...+ ++..++++++++++.+
T Consensus 280 sK~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 347 (433)
T 1z7d_A 280 GKALS-GGHYPISAVLAN--------DDIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLE 347 (433)
T ss_dssp CGGGG-TTSSCCEEEEEC--------HHHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred Ccccc-CCCCCeEEEEEC--------HHHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 99987 78 999999996 35666555432 23457788888888888864222 2345566667777777
Q ss_pred HhhcC----CCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHH
Q 014631 331 RIKEI----PCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALE 404 (421)
Q Consensus 331 ~l~~~----~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~ 404 (421)
.|+++ |.+. . .+..|.++|+.++... .+..++...+ .++||.+.|+. .+++|++++ .++++++
T Consensus 348 ~L~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~----~~~~~~~~~l-~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~ 416 (433)
T 1z7d_A 348 NLKRELKDSKIVR-D-VRGKGLLCAIEFKNEL----VNVLDICLKL-KENGLITRDVH----DKTIRLTPPLCITKEQLD 416 (433)
T ss_dssp HHHHHHTTCTTEE-E-EEEETTEEEEEECTTT----CCHHHHHHHH-HHTTEECCEET----TTEEEECCCTTCCHHHHH
T ss_pred HHHHHHHhCCCeE-E-EEeeeeEEEEEEccCh----hHHHHHHHHH-HHCCeEEecCC----CCEEEEECCcCCCHHHHH
Confidence 76643 3222 1 1334678888886320 1355677666 45799999862 578999886 7999999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
+++++|+++++++.+
T Consensus 417 ~~l~~l~~~l~~~~~ 431 (433)
T 1z7d_A 417 ECTEIIVKTVKFFDE 431 (433)
T ss_dssp HHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999987754
No 154
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=8.7e-31 Score=255.12 Aligned_cols=331 Identities=17% Similarity=0.165 Sum_probs=221.7
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCe---E
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGAN---I 136 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~---V 136 (421)
+.+.+++.+.+.... ..|++..+..+++++++++++ .+++++|+|+++|++.++.++.+ +||+ |
T Consensus 55 ~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~v 125 (467)
T 1ax4_A 55 NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPV 125 (467)
T ss_dssp CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCE
T ss_pred HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceE
Confidence 566777777766543 367777788899999999983 26899999999999999999988 9998 9
Q ss_pred EEcCCCCcchHHHHhhcCceeEeeeccC----C----CCccCCHHHHHhhhcc----CceEEEEeCCCCCc-ccccCHHH
Q 014631 137 LLPKPGFPLYEANARHTRLEIRHFDLLP----E----KGWEVDLDGLEALADE----NTVAMVIVNPGNPC-GNVFTYQQ 203 (421)
Q Consensus 137 l~~~p~y~~~~~~~~~~g~~~~~~~~~~----~----~~~~~d~e~l~~~~~~----~~~~i~~~~p~npt-G~~~~~~~ 203 (421)
+++.+.|..+...+...|.+++.++... . .++.+|+++|++.+++ ++++|++++|+||| |.+++.++
T Consensus 126 iv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~ 205 (467)
T 1ax4_A 126 FISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSN 205 (467)
T ss_dssp EEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHH
T ss_pred EEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhH
Confidence 9986666666777888898877665421 1 1346899999998864 68899999999999 89999999
Q ss_pred HHHHHHHHHhcCcEEEEcccccc--c--------ccCCCCccccc-ccCCCCCEEEEcccccccCCC-CceEEEEEeeCC
Q 014631 204 LQKIAEKARKLGIMVISDEVYDH--L--------TFGSTPYVRMG-VFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDP 271 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~--~--------~~~~~~~~~~~-~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~ 271 (421)
+++|+++|++||+++|+|+++.. . .+.+.....+. ....... +++.|+||+++++ | |+++++++
T Consensus 206 l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d-~~~~s~sK~~g~~~G---g~~~~~d~ 281 (467)
T 1ax4_A 206 LKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNATIKEVIFDMYKYAD-ALTMSAKKDPLLNIG---GLVAIRDN 281 (467)
T ss_dssp HHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCCHHHHHHHHGGGCS-EEEEETTSTTCCSSC---EEEEESSC
T ss_pred HHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCchhhhhhhhccccc-eEEEeccccCCCCcc---eEEEeCCH
Confidence 99999999999999999998654 1 22232211111 0000011 4567999998765 3 66666532
Q ss_pred CcchhHHHHHHHHhhhcc------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC
Q 014631 272 SGILQELRIVDSIKGYLN------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE 345 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~ 345 (421)
. ++++.+..... ...+.+.....++...++...+ ++..++..++++++.+.|++ +++. +..|.
T Consensus 282 ~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~-~~~~-~~~~~ 350 (467)
T 1ax4_A 282 E------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLHYRIGQVKYLGDRLRE-AGIP-IQYPT 350 (467)
T ss_dssp H------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHHHHHHHH-TTCC-BCSSC
T ss_pred H------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHHHHHHHHHHHHHHHHh-CCCC-cccCC
Confidence 0 24444332211 1112233333333334432211 11222333666778888877 4777 44788
Q ss_pred ceeEEEEecCccc--cc-CCCChHHHHHHHHhhcCeeEEe-CCCC-------C-----CCCeEEEEec---CCHHHHHHH
Q 014631 346 GSMFVMVKLNLSL--LE-GISDDMEFALQLAKEESVIVLP-GMAV-------G-----MKNWLRITFA---IEPSALEEG 406 (421)
Q Consensus 346 ~~~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-------~-----~~~~iRi~~~---~~~e~l~~~ 406 (421)
+++++|+.+.... .+ ...+..+++..|+.++||.+.| |..+ + ..+++|++++ +++++++++
T Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~ 430 (467)
T 1ax4_A 351 GGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGEQKHADMEFMRLTIARRVYTNDHMDYI 430 (467)
T ss_dssp CSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEEECCTTSSCHHHHHHH
T ss_pred CceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCccccccccccccccccccceEEEecccccCCHHHHHHH
Confidence 8899998831100 00 0012456777665888999999 5431 1 1378999997 689999999
Q ss_pred HHHHHHHHHHhh
Q 014631 407 LGRIKAFCQRHA 418 (421)
Q Consensus 407 ~~~l~~~~~~~~ 418 (421)
+++|.+++++..
T Consensus 431 ~~~l~~~~~~~~ 442 (467)
T 1ax4_A 431 ADALIGLKEKFA 442 (467)
T ss_dssp HHHHHTTHHHHT
T ss_pred HHHHHHHHHhhh
Confidence 999999987753
No 155
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=1.1e-29 Score=244.70 Aligned_cols=330 Identities=13% Similarity=0.104 Sum_probs=232.4
Q ss_pred CCCeeeccCCCCCCCCCCC-CcHHHHHHHHHHHhcCCCC--CCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 43 PRPIIPLGHGDPSAFPCFR-TTPVAADAVVDAVRSAEFD--CYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~--~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
|..++||..|.+.. +++ .+|.+.+++.+++++.... .| +.....++++.++++++ .+++++++|++
T Consensus 75 g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~g--------~~~v~~~~sGs 143 (439)
T 2oat_A 75 GRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAF-YNNVLGEYEEYITKLFN--------YHKVLPMNTGV 143 (439)
T ss_dssp CCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTS-EESSHHHHHHHHHHHHT--------CSEEEEESSHH
T ss_pred CCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCcc-CCHHHHHHHHHHHHhcC--------CCEEEEeCCHH
Confidence 67788998875431 234 7899999999998763211 23 23345688888888762 57899999999
Q ss_pred HHHHHHHHHhc---------CCC-CeEEEcCCCCcchHH-HHhhcC------------ceeEeeeccCCCCccCCHHHHH
Q 014631 120 QAIQVILTVLA---------RPG-ANILLPKPGFPLYEA-NARHTR------------LEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 120 ~al~~~~~~l~---------~~g-d~Vl~~~p~y~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
+|+..+++.+. .+| |+|++.+|+|+++.. .....| .++..++. .|+++++
T Consensus 144 eA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~le 216 (439)
T 2oat_A 144 EAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPALE 216 (439)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHHH
Confidence 99999998864 357 899999999988644 334334 23444432 2899999
Q ss_pred hhhc-cCceEEEEeCC-CCCccc-ccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccc
Q 014631 177 ALAD-ENTVAMVIVNP-GNPCGN-VFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS 253 (421)
Q Consensus 177 ~~~~-~~~~~i~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 253 (421)
+.+. ++++++ +++| +|++|. .++.+++++|.++|++||+++|+||+|.++.+.|... .+...+...+++ |||
T Consensus 217 ~~l~~~~~~~v-i~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~s 291 (439)
T 2oat_A 217 RALQDPNVAAF-MVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LLG 291 (439)
T ss_dssp HHTTSTTEEEE-EECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EEC
T ss_pred HHhCCCCEEEE-EEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Eec
Confidence 9884 555544 5566 567896 4688999999999999999999999998876666432 222222222232 899
Q ss_pred cccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHH
Q 014631 254 KRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDR 331 (421)
Q Consensus 254 K~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (421)
|.++ +| +|+||++++ +++++.+.... ..+.+.+++++.++.++++...+ ++..++++++++++.+.
T Consensus 292 K~l~-~G~~~~G~v~~~--------~~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~ 359 (439)
T 2oat_A 292 KALS-GGLYPVSAVLCD--------DDIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRNE 359 (439)
T ss_dssp GGGG-TTSSCCEEEEEC--------HHHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cccc-CCCCCeEEEEEC--------HHHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHHH
Confidence 9986 58 899999996 35666555432 23456788888888888864222 24567788889999999
Q ss_pred hhcCCCcccc-CCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHH
Q 014631 332 IKEIPCITCP-RKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLG 408 (421)
Q Consensus 332 l~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~ 408 (421)
|+++ ++..+ ..+..|.++++.++... + .+..++...+ .++||.+.|+. .+++|++++ .++++++++++
T Consensus 360 L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l-~~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l~ 430 (439)
T 2oat_A 360 LMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRL-RDNGLLAKPTH----GDIIRFAPPLVIKEDELRESIE 430 (439)
T ss_dssp HTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHH-HHTTEECCBSS----SSEEEECCCTTCCHHHHHHHHH
T ss_pred HHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHH-HHCCeEEecCC----CCEEEEECccCCCHHHHHHHHH
Confidence 9876 43311 12334678888886421 0 1356677666 45799999852 578999886 79999999999
Q ss_pred HHHHHHHH
Q 014631 409 RIKAFCQR 416 (421)
Q Consensus 409 ~l~~~~~~ 416 (421)
+|++++++
T Consensus 431 ~l~~~l~~ 438 (439)
T 2oat_A 431 IINKTILS 438 (439)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 99998864
No 156
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=2.2e-29 Score=241.69 Aligned_cols=323 Identities=16% Similarity=0.168 Sum_probs=224.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCC----HHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCe
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGI----LPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGAN 135 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~----~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~ 135 (421)
+.++.+.+++.+.+.......|++..|. .++++.+++++ | .+ +++++++|++++..++.++ +++||+
T Consensus 13 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~----g--~~--~~i~~~~gt~al~~~~~~~~~~~gd~ 84 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFN----G--VP--YCVPTTSGSTALMLALEALGIGEGDE 84 (418)
T ss_dssp CCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHH----T--CS--EEEEESCHHHHHHHHHHHTTCCTTCE
T ss_pred CCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHh----C--CC--cEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence 4579999999999987544447776674 45555555555 3 22 5677778899999999999 899999
Q ss_pred EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 136 ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 136 Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
|+++.|+|+++...+...|++++.+++++ +++.+|++++++.+++++++|++ +||||.. .++++|.++|+++|
T Consensus 85 Vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~---~~~~~i~~~~~~~~ 157 (418)
T 2c81_A 85 VIVPSLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSM---ANMDEINEIAQEHN 157 (418)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCC---CCHHHHHHHHHHTT
T ss_pred EEECCCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCc---ccHHHHHHHHHHCC
Confidence 99999999999999999999999998754 35679999999999888887765 4589987 56899999999999
Q ss_pred cEEEEcccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc-
Q 014631 216 IMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS- 291 (421)
Q Consensus 216 ~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~- 291 (421)
+++|+|++|+.+. +.+.. +..+. .+.+.|| ||.++. | |+||+++++ +++.+.+.......
T Consensus 158 ~~li~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~-------~~l~~~~~~~~~~~~ 221 (418)
T 2c81_A 158 LFVIEDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKN-------PRLFELIQQLRADSR 221 (418)
T ss_dssp CEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESC-------HHHHHHHHHHHBTTE
T ss_pred CEEEEECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECC-------HHHHHHHHHHHHhCc
Confidence 9999999999875 44321 22221 1667777 999876 7 999999853 34555554332110
Q ss_pred ------------cC-----Cc--------hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc
Q 014631 292 ------------SG-----PA--------TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG 346 (421)
Q Consensus 292 ------------~~-----~~--------~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~ 346 (421)
.. +. ...+.++. +. ....+++..++.+++++++.+.|.++|++.+...+.+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~--~~--~l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 297 (418)
T 2c81_A 222 VYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAIL--LD--QLQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQ 297 (418)
T ss_dssp EECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHH--HH--HHTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTT
T ss_pred cccccccccccchhhccccccccCcCCCcCHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC
Confidence 00 00 01122111 11 1233566777778889999999998888874324554
Q ss_pred -eeEEE----EecCcccccCCCChHHHHHHHHhhcCee---EEeCCCCC----------------------------C--
Q 014631 347 -SMFVM----VKLNLSLLEGISDDMEFALQLAKEESVI---VLPGMAVG----------------------------M-- 388 (421)
Q Consensus 347 -~~~~~----~~~~~~~~~~~~~~~~~~~~ll~~~gv~---v~~g~~~~----------------------------~-- 388 (421)
+...| +.++..... ..+..++...|.+++||. +.+|.... .
T Consensus 298 ~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (418)
T 2c81_A 298 VSRQTYYGYVFRFDPVKFG-GLNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYP 376 (418)
T ss_dssp EEECCCSEEEEEECGGGTT-TCCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCH
T ss_pred CcccccEEEEEEEcccccc-ccCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCCh
Confidence 33222 555521000 114566776665444999 88875220 0
Q ss_pred ------CCeEEEEec--C-CHHHHHHHHHHHHHHHHHhhh
Q 014631 389 ------KNWLRITFA--I-EPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 389 ------~~~iRi~~~--~-~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+.+|++++ + +++|++++++.|+++++++..
T Consensus 377 ~~~~~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~ 416 (418)
T 2c81_A 377 VSERASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCV 416 (418)
T ss_dssp HHHHHHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhcc
Confidence 147999997 7 999999999999999887654
No 157
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=6.5e-30 Score=245.19 Aligned_cols=320 Identities=12% Similarity=0.082 Sum_probs=227.4
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC--------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS--------PSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~--------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
...++|+.+.+. +.|+.+.+++.+.+... ...+. ....+.++++.+++++ | +++++|++|
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~l~~~la~~~----g--~~~~~v~~~ 94 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEE-WGNGLIRSWNSAGWRDLSERLGNRLATLI----G--ARDGEVVVT 94 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTC-CCCCGGGHHHHTSGGGHHHHHHHHHHTTT----T--CCTTSEEEC
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHH-HhccCccccchhhHHHHHHHHHHHHHHHc----C--CCcccEEEe
Confidence 467888887643 56788999999988752 11111 0123356666666665 3 567899999
Q ss_pred CCHHHHHHHHHHHhc------CCCCeEE-EcCCCCcchHHH----Hhhc--CceeEeeeccCCCCccCCHHHHHhhhccC
Q 014631 116 AGCKQAIQVILTVLA------RPGANIL-LPKPGFPLYEAN----ARHT--RLEIRHFDLLPEKGWEVDLDGLEALADEN 182 (421)
Q Consensus 116 ~g~~~al~~~~~~l~------~~gd~Vl-~~~p~y~~~~~~----~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~ 182 (421)
+|+++++..++.++. ++||+|+ ++.+.|.++... +... |++++.++. ++++++.++++
T Consensus 95 ~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~ 165 (416)
T 1qz9_A 95 DTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQD 165 (416)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTT
T ss_pred CChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCC
Confidence 999999998888876 8999754 455677655433 2233 888887764 67888888888
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++++++|+||||.+++ +++|.++|++||+++|+|++|+. |.....+..++. .+++.|+||++ .+|.+
T Consensus 166 ~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~----g~~~~~~~~~~~---d~~~~s~~K~l-~~g~~ 234 (416)
T 1qz9_A 166 TAVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSA----GAVPVDLHQAGA---DYAIGCTYKYL-NGGPG 234 (416)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTT----TTSCCCHHHHTC---SEEEECSSSTT-CCCTT
T ss_pred ceEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEccccc----cCcCCChhhcCC---CEEEecCcccC-CCCCC
Confidence 999999999999999977 78999999999999999999985 222222323322 37788999995 45677
Q ss_pred E-EEEEeeCCCcchhHHHHHHHHhhh------------------------cccccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 263 L-GWLVTSDPSGILQELRIVDSIKGY------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 263 ~-G~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
+ |++++++. +.+.+... ....++++...+.++.++++.....++++.
T Consensus 235 ~~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 306 (416)
T 1qz9_A 235 SQAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASL 306 (416)
T ss_dssp CCCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHH
T ss_pred CeEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 7 99999642 22222221 011235677777777777764333567888
Q ss_pred HHHHHHHHHHHHHHhhcC-C--CccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCC
Q 014631 318 VDILRDTADICYDRIKEI-P--CITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKN 390 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~-~--g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~ 390 (421)
.++++++++++.+.|+++ | ++.+. .+. .+.++|+.++ +..++...| .++||.+... ..+
T Consensus 307 ~~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~ 372 (416)
T 1qz9_A 307 RRKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPR 372 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTT
T ss_pred HHHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCC
Confidence 899999999999999875 6 77733 443 3557787775 245666665 5679987542 357
Q ss_pred eEEEEec---CCHHHHHHHHHHHHHHHHHh
Q 014631 391 WLRITFA---IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 391 ~iRi~~~---~~~e~l~~~~~~l~~~~~~~ 417 (421)
++|++++ ++++++++++++|++++++.
T Consensus 373 ~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 373 IMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp EEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred eEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 8999986 58999999999999998764
No 158
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.6e-30 Score=251.26 Aligned_cols=334 Identities=13% Similarity=0.082 Sum_probs=242.0
Q ss_pred CCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----C
Q 014631 61 RTTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR-----P 132 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~-----~ 132 (421)
+.++.+.+++.+.+... +...|....+..++++.+++++.+.+|.+.+++++++++|+++++..++.++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 45578888888887652 223455556677999999999999888666688999999999999999998864 5
Q ss_pred C---CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHH
Q 014631 133 G---ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAE 209 (421)
Q Consensus 133 g---d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~ 209 (421)
| |+|+++.++|.++...+...|++++.+++++ +++.+|++++++++++++++|++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999999764 35679999999999989999999999999999955 778999
Q ss_pred HHHhcCcEEEEcccccccccC-----CCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 210 KARKLGIMVISDEVYDHLTFG-----STPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 210 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
+|++||+++|+|++|+.+... +.+.. ++. ....+-.+++.|++|+ +.+|.++|++++++ +....
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~ 300 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLLD-FRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM 300 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCCS-TTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCcccc-ccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence 999999999999999865421 11111 111 1111223777899998 56778899999864 12222
Q ss_pred Hhhhcc-c-----------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCCceeEE
Q 014631 284 IKGYLN-I-----------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPEGSMFV 350 (421)
Q Consensus 284 ~~~~~~-~-----------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~~~~~~ 350 (421)
...... . .++.+.....++..++......++++..++..++++++.+.|++ +|++.++..|..+ ++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~-~v 379 (497)
T 3mc6_A 301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS-VI 379 (497)
T ss_dssp TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS-EE
T ss_pred hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee-EE
Confidence 211110 0 01111122222333333223466788888999999999999998 6998855345444 44
Q ss_pred EEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHhhh
Q 014631 351 MVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
++..+. .+..++...| .++||.+.++.. +..+|++++ .+++++++++++|++++++..+
T Consensus 380 ~~~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 380 SFSSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp EEECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEeCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 444432 1456666655 567999887643 357899988 7889999999999999987754
No 159
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.97 E-value=5.3e-30 Score=249.66 Aligned_cols=346 Identities=12% Similarity=0.047 Sum_probs=238.4
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCC--CcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSP--DDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~--~~i~~~ 115 (421)
.+.|+|..+. .+.++.+++++.+.+.+....+ |+...+..++++.+.+++.+.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e------~~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASE------NFASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTC------CCCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCC------CCCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 4678897664 2468999999988876532112 3333345688888888888888754221 247788
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH--------HhhcCceeEeeec--cCCCCccCCHHHHHhhhc-cCce
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEAN--------ARHTRLEIRHFDL--LPEKGWEVDLDGLEALAD-ENTV 184 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~--------~~~~g~~~~~~~~--~~~~~~~~d~e~l~~~~~-~~~~ 184 (421)
+|+ +++..++.++++|||+|+++++.|.++... +...|..+..++. ++ +++.+|+|++++.+. ++++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 877 888888889999999999999998876532 2334422444443 43 357799999999987 7889
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
+|++ +++|++ .+++ +++|.++|+++|+++|+|++|.. +...+....++. . ..+++.|+||+| .|+|.
T Consensus 196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence 8888 888888 7755 88999999999999999999874 333333222222 1 127789999985 57888
Q ss_pred EEEEeeCCCcchhHH-------HHHHHHhhhc--ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 264 GWLVTSDPSGILQEL-------RIVDSIKGYL--NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 264 G~~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
||+++++........ ++.+.+.... ...++++.....++..++......++++..+++.++++++.+.|.+
T Consensus 264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 999998642100000 1223333221 1134566666666666665433457788899999999999999998
Q ss_pred CCCccccCCCC-ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE----eCCCCC-CCCeEEEEec--CC----HHH
Q 014631 335 IPCITCPRKPE-GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL----PGMAVG-MKNWLRITFA--IE----PSA 402 (421)
Q Consensus 335 ~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~~~-~~~~iRi~~~--~~----~e~ 402 (421)
+ |+.++ .+. ++++.|+.+.... .+..++ ..+|++.||.+. ||..+. ..+++||+++ ++ +++
T Consensus 344 ~-g~~~~-~~~~~~~~~~v~~~~~g----~~~~~~-~~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed 416 (483)
T 1rv3_A 344 L-GYKIV-TGGSDNHLILVDLRSKG----TDGGRA-EKVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD 416 (483)
T ss_dssp T-TCEEG-GGSCSSSEEEEEGGGGT----CCHHHH-HHHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred c-CCEec-cCCCCCceEEEeccCCC----CCHHHH-HHHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence 8 88744 342 3467888886421 134444 456688999999 876321 2578999998 46 899
Q ss_pred HHHHHHHHHHHHHH
Q 014631 403 LEEGLGRIKAFCQR 416 (421)
Q Consensus 403 l~~~~~~l~~~~~~ 416 (421)
++++++.|.++++.
T Consensus 417 i~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 417 FQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998875
No 160
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=5.5e-30 Score=248.63 Aligned_cols=349 Identities=15% Similarity=0.105 Sum_probs=230.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|++++||..|......+ ..+|.+++|+.+++++... .|....+..+.+..+++.+.+..+ .+.++|++++||++|
T Consensus 53 ~G~~ylD~~s~~~~~~lG-h~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGseA 128 (472)
T 3hmu_A 53 EGEEILDAMAGLWCVNIG-YGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSEA 128 (472)
T ss_dssp TCCEEECTTHHHHTCTTC-BCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCC-CCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHHH
Confidence 478899998874332222 3689999999999987431 232222334555666666655543 456799999999999
Q ss_pred HHHHHHHhcC--------CCCeEEEcCCCCcchHHHHhhcCc------------eeEeeeccC--C-CCccCC-------
Q 014631 122 IQVILTVLAR--------PGANILLPKPGFPLYEANARHTRL------------EIRHFDLLP--E-KGWEVD------- 171 (421)
Q Consensus 122 l~~~~~~l~~--------~gd~Vl~~~p~y~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~d------- 171 (421)
+..+++.+.+ ++++|++.+++|+++...+...+. .+..++.+. . +++ .+
T Consensus 129 ~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~~ 207 (472)
T 3hmu_A 129 NDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGLA 207 (472)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHHH
Confidence 9999998864 358999999999998666554433 233343211 0 111 23
Q ss_pred -HHHHHhhhcc---CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCC
Q 014631 172 -LDGLEALADE---NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVP 245 (421)
Q Consensus 172 -~e~l~~~~~~---~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 245 (421)
+++|++.+.. +..++++++| ++++|.+. +++.+++|.++|++||+++|+||+|+++.+.|..+ ....++...+
T Consensus 208 ~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~pd 286 (472)
T 3hmu_A 208 RARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRPH 286 (472)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCCS
T ss_pred HHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCCc
Confidence 6788877752 3344556655 66777654 88899999999999999999999999987776532 2223333223
Q ss_pred EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh--c-ccccCCchHHHHHHHHHhhccchhHHHHHHHHHH
Q 014631 246 VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY--L-NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILR 322 (421)
Q Consensus 246 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 322 (421)
++ +|||+++.+|+|+|+++++ +++++.+... . ..+.+.++++++++.++|+...+ ++..++++
T Consensus 287 i~---t~sK~l~gg~~plG~v~~~--------~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~~ 352 (472)
T 3hmu_A 287 IM---TIAKGLSSGYAPIGGSIVC--------DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHVR 352 (472)
T ss_dssp EE---EECGGGTTTSSCCEEEEEE--------HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHH
T ss_pred ee---eechhhhcCCcceEEEEEC--------HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHHH
Confidence 33 6889977666999999996 4677877322 1 23457889999999888874222 23344445
Q ss_pred -HHHHHHHHHhhc---CCCccccCCCCceeEEEEecCcccccC-------CCChHHHHHHHHhhcCeeEEeCCCCCCCCe
Q 014631 323 -DTADICYDRIKE---IPCITCPRKPEGSMFVMVKLNLSLLEG-------ISDDMEFALQLAKEESVIVLPGMAVGMKNW 391 (421)
Q Consensus 323 -~~~~~~~~~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 391 (421)
++.+++++.|++ +|.+..+ .+ .|.++++.+....... ......+...+ .++||.+.|+. ++
T Consensus 353 ~~~~~~l~~~L~~l~~~~~v~~v-r~-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~ 424 (472)
T 3hmu_A 353 NVAAPYLKEKWEALTDHPLVGEA-KI-VGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----DR 424 (472)
T ss_dssp HTHHHHHHHHHHGGGGSTTEEEE-EE-ETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----TE
T ss_pred HHHHHHHHHHHHHHhcCCCeEEE-Ee-cCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----CE
Confidence 555555555543 4444422 33 3556667764321000 00033455554 56799999863 79
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+|++++ .+++++++++++|++++++..
T Consensus 425 iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 425 MIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999965 899999999999999987754
No 161
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=1.6e-29 Score=242.61 Aligned_cols=339 Identities=14% Similarity=0.068 Sum_probs=223.5
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
..++|..+. .+.++.+.+++.+.+.+.....|+ ......++++.+.+++.+.+| .++++|++++|
T Consensus 26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG- 96 (417)
T 3n0l_A 26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG- 96 (417)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence 457775443 245899999998887543222232 223335666644445544444 45667877777
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~np 194 (421)
++++..++.+++++||+|++++|+|.++.. .....|..+..++++.++++.+|++++++.++ +++++|++++|+|
T Consensus 97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~- 175 (417)
T 3n0l_A 97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRIDYEKVREIAKKEKPKLIVCGASAY- 175 (417)
T ss_dssp HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCCHHHHHHHHHHHCCSEEEECCSSC-
T ss_pred HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcCHHHHHHHHHhcCCeEEEECCccc-
Confidence 799999999999999999999999987644 33334444333333333556799999999887 5788888878776
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCc
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSG 273 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 273 (421)
|..++ +++|.++|++||+++|+|++|.. ..+.+.....+. ...+++.|+||+| +|.|+||+++++
T Consensus 176 -G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~--- 241 (417)
T 3n0l_A 176 -ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTND--- 241 (417)
T ss_dssp -CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESC---
T ss_pred -CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECC---
Confidence 77766 88999999999999999999743 333333222221 1237889999985 788899999863
Q ss_pred chhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631 274 ILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 351 (421)
+++.+.+...... .++++...+.++..++......++++..++++++++++.+.|.+. |+.+...+..+.++|
T Consensus 242 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 316 (417)
T 3n0l_A 242 ----EELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHLVL 316 (417)
T ss_dssp ----HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEE
T ss_pred ----HHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceEEE
Confidence 3466666554332 234555555565555543234567888889999999999999884 777332234566888
Q ss_pred EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC------CCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631 352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM------KNWLRITFA------IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~ 417 (421)
+.++... .+.+.+..+++++||.+.++..+.. ...+|++++ .+++++++++++|.+++++.
T Consensus 317 ~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 317 MSFLDRE-----FSGKDADLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp EECTTSS-----SCHHHHHHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEcccCC-----CCHHHHHHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 8775321 1234455566888999987654322 367999986 35799999999999998653
No 162
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=9e-30 Score=240.72 Aligned_cols=324 Identities=15% Similarity=0.179 Sum_probs=230.9
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+.++++|+.+.|. .++ +.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++++
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 5678899988855 234 888888887763 56677788999999999983 23789999999999
Q ss_pred HHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCH
Q 014631 123 QVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 123 ~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~ 201 (421)
..++.++ .++||+|+++.|+|+++...++..|.+++.++++ +++.+|++++++.+++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~- 140 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD- 140 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence 9999999 8999999999999999999999999999999876 4567899999999988777665 8999999854
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHH
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
+++|.++|++||+++|+|++|+.+. +.+. ....+. .+++.|+| |+++.+|. .|++++++ +
T Consensus 141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~---~~~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~-------~ 203 (374)
T 3uwc_A 141 --MPALAKIAKKHNLHIVEDACQTILGRINDK---FVGSWG----QFACFSLHPLKNLNVWSD-AGVIITHS-------D 203 (374)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS----SEEEEECSSSSSSCCSSC-CEEEEESC-------H
T ss_pred --HHHHHHHHHHcCCEEEEeCCCccCceeCCe---eccccc----cEEEEeCCCCCcCCccce-eEEEEeCC-------H
Confidence 8889999999999999999998743 2221 111111 26677866 99765465 78888754 3
Q ss_pred HHHHHHhhhccc-------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC-ccccCCC
Q 014631 279 RIVDSIKGYLNI-------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC-ITCPRKP 344 (421)
Q Consensus 279 ~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~ 344 (421)
++.+.+...... ....+.+...+.... ...+++..++.+++.+++.+.|+++++ +.....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRL-----MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHH-----GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 455555443210 011122222222222 234566777888889999999998876 7633333
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-------------C----------CCeEEEEec--CC
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-------------M----------KNWLRITFA--IE 399 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~----------~~~iRi~~~--~~ 399 (421)
.++...|..+.... .+..++...| .++||.+.++.... . ...+|++++ ++
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 353 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT 353 (374)
T ss_dssp TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence 33333322221110 1345565554 67799999886110 0 167999987 79
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014631 400 PSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~ 417 (421)
++|++++++.|++++++.
T Consensus 354 ~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 354 EEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 163
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.97 E-value=3.9e-30 Score=250.25 Aligned_cols=333 Identities=11% Similarity=0.052 Sum_probs=231.6
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhc----CC---CCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEc
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRS----AE---FDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLT 115 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~---~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~ 115 (421)
+++++|+.+... +.|+.+.+++.+.+.. +. ...|. ......++++.+++++ ++++++|++|
T Consensus 66 ~~~iyld~~~~g-----~~p~~v~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t 134 (465)
T 3e9k_A 66 ENAIYFLGNSLG-----LQPKMVKTYLEEELDKWAKIAAYGHEVGKRPWITGDESIVGLMKDIV------GANEKEIALM 134 (465)
T ss_dssp CBCEECBTTTSC-----CEETTHHHHHHHHHHHHHHHGGGGGTSSSSCGGGTTHHHHGGGHHHH------TCCGGGEEEC
T ss_pred CCeEEecCCccC-----CChHHHHHHHHHHHHHHHhhCCcccccCCccHHHhHHHHHHHHHHHc------CCCcCCEEEE
Confidence 467888877644 3445555555554432 11 11121 1233467888888887 4668999999
Q ss_pred CCHHHHHHHHHHHhcCCCCe---EEEcCCCCcchH----HHHhhcCceeEe--eecc-CCCCccCCHHHHHhhhc---cC
Q 014631 116 AGCKQAIQVILTVLARPGAN---ILLPKPGFPLYE----ANARHTRLEIRH--FDLL-PEKGWEVDLDGLEALAD---EN 182 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~---Vl~~~p~y~~~~----~~~~~~g~~~~~--~~~~-~~~~~~~d~e~l~~~~~---~~ 182 (421)
+|+++++++++.++.++|+. |+++.|+|++.. ..++..|+++.. +.+. .++++.+|++++++.++ ++
T Consensus 135 ~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~~~~~~~~~~d~~~l~~~i~~~~~~ 214 (465)
T 3e9k_A 135 NALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMIKPREGEETLRIEDILEVIEKEGDS 214 (465)
T ss_dssp SCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEECCCTTCSSCCHHHHHHHHHHHGGG
T ss_pred CCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEEecCCCCCccCHHHHHHHHHhcCCC
Confidence 99999999999999876655 999999998743 366678887532 1221 23456789999999886 57
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++++++|+||||.+++ +++|.++|++||+++|+|++|+. |.....+..++. .+++.|++|.+..+..+
T Consensus 215 ~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~gp~~ 284 (465)
T 3e9k_A 215 IAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAV----GNVELYLHDWGV---DFACWCSYKYLNAGAGG 284 (465)
T ss_dssp EEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTT----TTSCCCHHHHTC---CEEEECSSSTTCCCTTC
T ss_pred eEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCchhhcCC---CEEEECcccccccCCCc
Confidence 889999999999999976 68888999999999999999986 332233333333 37888999997433336
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhh--------------------------cccccCCchHHHHHHHHHhhccchhHHHH
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGY--------------------------LNISSGPATFVQGAVPQIFKNTKEDFFSK 316 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~--------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (421)
+|++++++. +.+.+... ....++++.....++.++++...+..+++
T Consensus 285 ~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~~~~~~~~~~ 356 (465)
T 3e9k_A 285 IAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLEIFKQATMKA 356 (465)
T ss_dssp CCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHHHHCHHH
T ss_pred eEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHHHHHHcCHHH
Confidence 899988632 21111100 00113667777777777776533445788
Q ss_pred HHHHHHHHHHHHHHHhhcC----------CCccccCCCC----ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 317 IVDILRDTADICYDRIKEI----------PCITCPRKPE----GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~----------~g~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
++++.+++++++.+.|+++ +++.+. .|. .|.++++.++. +..++...| .++||.+..
T Consensus 357 ~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~~~~-------~~~~l~~~L-~~~Gi~v~~ 427 (465)
T 3e9k_A 357 LRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTITFSV-------PNKDVFQEL-EKRGVVCDK 427 (465)
T ss_dssp HHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEEECC-------TTCCHHHHH-HTTTEECEE
T ss_pred HHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEEecC-------CHHHHHHHH-HHCCEEEec
Confidence 9999999999999999874 688743 554 36678877762 234566655 566999874
Q ss_pred CCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHhh
Q 014631 383 GMAVGMKNWLRITF-A--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 383 g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+ .++++|+++ + ++.++++++++.|++++++..
T Consensus 428 ~----~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 428 R----NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp E----TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred C----CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 2 358999998 4 789999999999999987543
No 164
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=5.8e-30 Score=246.43 Aligned_cols=343 Identities=13% Similarity=0.055 Sum_probs=228.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.+++||..|......+ ..+|.+.+++.+++.+.... +.+.....+|++.+++++ + .++++++++||+++
T Consensus 51 ~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~~~-~~~~~~~~~l~~~la~~~------~-~~~~v~~~~~Gsea 121 (429)
T 3k28_A 51 DGNEYIDYVLSWGPLIHG-HANDRVVEALKAVAERGTSF-GAPTEIENKLAKLVIERV------P-SIEIVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESCGGGTTCTTC-BSCHHHHHHHHHHHHHCSCC-SSCCHHHHHHHHHHHHHS------T-TCSEEEEESSHHHH
T ss_pred CCCEEEECCCChhhcccC-CCCHHHHHHHHHHHhhCcCc-CCCCHHHHHHHHHHHHhC------C-CCCEEEEeCChHHH
Confidence 478899999887543322 36899999999999875432 334445567888888776 2 47899999999999
Q ss_pred HHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhc-CceeEeeeccCCCCcc------------CCHHHHHhhhcc--Cce
Q 014631 122 IQVILTVLAR--PGANILLPKPGFPLYEANARHT-RLEIRHFDLLPEKGWE------------VDLDGLEALADE--NTV 184 (421)
Q Consensus 122 l~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~e~l~~~~~~--~~~ 184 (421)
+..+++.+.. ++++|++.+++|+++...+... |.....++.....+.. -|++++++.+.. ...
T Consensus 122 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 3k28_A 122 TMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGDDI 201 (429)
T ss_dssp HHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 9999987754 5689999999999775444332 2222222211111110 178899888762 334
Q ss_pred EEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 185 AMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 185 ~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++++| +|++|.+. +++.+++|.++|++||+++|+||+|.++ +.|... ....++...+ +.||||.|+ +|+|
T Consensus 202 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 275 (429)
T 3k28_A 202 ACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GGLP 275 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TTSC
T ss_pred EEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CCCC
Confidence 4556666 45566554 6788999999999999999999999988 555322 2222222222 347899986 5999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc----
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE---- 334 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~---- 334 (421)
+||++++ +++++.+.... ..+.+.+++++.++.++++... ++..++++++++++.+.|++
T Consensus 276 iG~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~~~ 343 (429)
T 3k28_A 276 VGAYGGK--------AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAAEK 343 (429)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEc--------HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999985 35766665422 2345788999999999997533 45566666666666666654
Q ss_pred CCCccccCCCCceeEEEEecCcccc--------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLL--------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEG 406 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~ 406 (421)
.+.+. . .+..|.++++.+..... +.......++..+ .++||.+.|+. .+.+|+++..++++++++
T Consensus 344 ~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~~~ 416 (429)
T 3k28_A 344 HGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIEAT 416 (429)
T ss_dssp TTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHHHH
T ss_pred CCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHHHH
Confidence 33333 2 23345567776643210 0000124455554 56799999864 356888888999999999
Q ss_pred HHHHHHHHHHhh
Q 014631 407 LGRIKAFCQRHA 418 (421)
Q Consensus 407 ~~~l~~~~~~~~ 418 (421)
+++|++++++++
T Consensus 417 l~~l~~~l~~~~ 428 (429)
T 3k28_A 417 IAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 165
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=3.5e-30 Score=248.67 Aligned_cols=327 Identities=15% Similarity=0.107 Sum_probs=220.7
Q ss_pred CCeeeccCC-CCCCCCCCCCcHHHHHHHHHH---HhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 44 RPIIPLGHG-DPSAFPCFRTTPVAADAVVDA---VRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 44 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..+|+|+.| +|. ++.++.+.++.... ........|. ..+.+ +++++++++.+.+| .+++++++||+
T Consensus 89 ~~~i~l~~g~~~~----~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g----~~~~i~~~sGt 158 (464)
T 1ibj_A 89 TLLVNLDNKFDPF----DAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDK----ADRAFCFTSGM 158 (464)
T ss_dssp HHHTCCCCSSCTT----CCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHT----CSEEEEESSHH
T ss_pred CeEEECCCCCCCC----CCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhC----CCeEEEECCHH
Confidence 457888887 433 45556666655432 1112234565 34544 67777777777665 23777888889
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC 195 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt 195 (421)
+++..++. ++++||+|++++|.|+++... ++..|.+++.++.+ |++++++.++++++++++++|+|||
T Consensus 159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt 230 (464)
T 1ibj_A 159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR 230 (464)
T ss_dssp HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence 99998885 778999999999999988653 56679898888752 7899999998889999999999999
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-CceEEEEEeeCCCcc
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-GWRLGWLVTSDPSGI 274 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~ 274 (421)
|.+++ +++|+++|++||+++|+|++|.... ...++. + +..+++.|+||+|+.+ |+|+||+++++
T Consensus 231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~---- 295 (464)
T 1ibj_A 231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKG---- 295 (464)
T ss_dssp CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECS----
T ss_pred CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEECh----
Confidence 99985 8999999999999999999997632 111222 2 3458899999988754 89999999963
Q ss_pred hhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHH----------HHhhcCCCccccCC
Q 014631 275 LQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICY----------DRIKEIPCITCPRK 343 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----------~~l~~~~g~~~~~~ 343 (421)
+++.+.+..... ...+.+++.+.++...++. ....+++..+......+++. +.|+++|++.+. .
T Consensus 296 ---~~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~-~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 370 (464)
T 1ibj_A 296 ---EKLAKEVYFLQNSEGSGLAPFDCWLCLRGIKT-MALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-F 370 (464)
T ss_dssp ---HHHHHHHHHHHHHTTCBCCHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-T
T ss_pred ---HHHHHHHHHHHHhcCCCCCHHHHHHHHhchhh-HHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-h
Confidence 246666655442 2345677888887777753 22222222222222223332 234444555522 3
Q ss_pred CC---ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC------------CC----------CC-CCeEEEEec
Q 014631 344 PE---GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM------------AV----------GM-KNWLRITFA 397 (421)
Q Consensus 344 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------------~~----------~~-~~~iRi~~~ 397 (421)
+. .+.++++.++.. .....++.. ++..||.+.+|. .+ +. ++++|++++
T Consensus 371 ~~~~g~g~~~~~~l~~~-----~~~~~~~~~-L~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg 444 (464)
T 1ibj_A 371 SQAKGAGSVFSFITGSV-----ALSKHLVET-TKYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG 444 (464)
T ss_dssp TTCSCCCSEEEEECSCH-----HHHHHHHHH-CSSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC
T ss_pred ccCCCCceEEEEEECCH-----HHHHHHHHh-cCcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence 32 245777777421 012234444 455789888875 11 12 468999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~~~ 416 (421)
. |++++++++|++++++
T Consensus 445 ~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 445 I--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp S--SCHHHHHHHHHHHHHS
T ss_pred C--CCHHHHHHHHHHHHhh
Confidence 8 8999999999998864
No 166
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=3.4e-29 Score=238.34 Aligned_cols=324 Identities=11% Similarity=0.098 Sum_probs=230.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQV 124 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~ 124 (421)
++|+|+. |. .++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++|+++++..
T Consensus 9 ~~i~~~~--p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--PA------MGAEELAAVKTVLDSG---WITTGPKNQELEAAFCRLTG--------NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--CC------CCHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHH
T ss_pred cccccCC--CC------CCHHHHHHHHHHHhcC---CcCCChHHHHHHHHHHHHhC--------CCcEEEecChHHHHHH
Confidence 4677764 33 3467789999988764 24455678899999999984 2479999999999999
Q ss_pred HHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 125 ILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 125 ~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
++.++ .++||+|+++.|+|+++...++..|++++.+++++ +++.+|++++++.+++++++++++ ||||... +
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~---~ 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPA---D 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCC---C
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcC---C
Confidence 99999 89999999999999999999999999999998764 346799999999998778877654 4899985 4
Q ss_pred HHHHHHHHHhcCcEEEEccccccc-ccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHL-TFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVD 282 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 282 (421)
+++|.++|+++|+++|+|++|+.+ .+.+. ++ +. ..+++.|+||..+++|.|+||+++++ +++.+
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~-------~~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGR---HI---GA--RGTAIFSFHAIKNITCAEGGIVVTDN-------PQFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTE---ET---TS--SSEEEEECCTTSSSCSSSCEEEEESC-------HHHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCe---ec---CC--CCeEEEeCCCCCccccccceEEEeCC-------HHHHH
Confidence 889999999999999999999963 33322 11 11 34888999943344556899999853 34555
Q ss_pred HHhhhcccc-------------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 283 SIKGYLNIS-------------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 283 ~~~~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
.+....... ...+.+...++...++ .+++..++.+++++++.+.|.+++
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~- 281 (393)
T 1mdo_A 208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP- 281 (393)
T ss_dssp HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 554432110 0123333333233332 255666677788889999998874
Q ss_pred ccccCCC-----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC--------------CC-------CCe
Q 014631 338 ITCPRKP-----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV--------------GM-------KNW 391 (421)
Q Consensus 338 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------------~~-------~~~ 391 (421)
+.+...+ .+++++|+.++.... ..+..++...+ .++||.+.+|..+ .. ...
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T 1mdo_A 282 FQPLSLPSWEHIHAWHLFIIRVDEARC--GITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI 358 (393)
T ss_dssp CEECCCCSSCEECCCSCEEEECCHHHH--SSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred cccccCCCCCCCceeEEEEEEeccccc--ccCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence 6532122 345678888863100 01355666655 5679999988754 11 247
Q ss_pred EEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 392 LRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+|++++ +++++++++++.|+++++...
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~~ 387 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQGS 387 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC---
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhcCC
Confidence 999998 799999999999999886543
No 167
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=2.5e-30 Score=243.11 Aligned_cols=329 Identities=14% Similarity=0.039 Sum_probs=222.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
......++.|... +++++.+.+++.+.+. ...|++..+..++++.++++++ . +..++++||++++
T Consensus 12 ~~~~~~~~~~~~~----~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~g~~a~ 76 (359)
T 3pj0_A 12 KTPYKLGGNGPRN----VGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKILG------K--QSAVFFPSGTMAQ 76 (359)
T ss_dssp TCSEESSSSSCCB----HHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHH
T ss_pred hcchhhcCCCccc----cCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHhC------C--CcEEEeCCHHHHH
Confidence 4555556655421 3457888888877432 2467777778899999999984 2 2335558888999
Q ss_pred HHHHHHhcCCCCe--EEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc-c
Q 014631 123 QVILTVLARPGAN--ILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC-G 196 (421)
Q Consensus 123 ~~~~~~l~~~gd~--Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt-G 196 (421)
..+++++.++||+ |+++.+.|.... ......|.+++.++. +++.+|++++++. .++++++++++|+||+ |
T Consensus 77 ~~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G 152 (359)
T 3pj0_A 77 QIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGG 152 (359)
T ss_dssp HHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTS
T ss_pred HHHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCc
Confidence 9999999888886 555555544322 222456888888765 3457899999988 7789999999999988 7
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEccccccccc--CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTF--GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI 274 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 274 (421)
.+++.+++++|+++|++||+++|+|++|..+.. .+.....+. .... +++.|+||++++++ + |+++.+
T Consensus 153 ~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~----- 221 (359)
T 3pj0_A 153 QLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGN----- 221 (359)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEEC-----
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECC-----
Confidence 999999999999999999999999999875431 122222221 1112 44568999876653 2 677664
Q ss_pred hhHHHHHHHHhhhccc-c--cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEE
Q 014631 275 LQELRIVDSIKGYLNI-S--SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVM 351 (421)
Q Consensus 275 ~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~ 351 (421)
+++++.+...... . .........++..+++. .. +..++++++++++.+.|+++|++.+...|..++++|
T Consensus 222 ---~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~ 293 (359)
T 3pj0_A 222 ---DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFH 293 (359)
T ss_dssp ---HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEE
T ss_pred ---HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEE
Confidence 4577777654321 1 11122222333334432 12 334456788889999999988988423567778888
Q ss_pred EecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC--CCeEEEEec-----CCHHHHHHHHHHHHHH
Q 014631 352 VKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM--KNWLRITFA-----IEPSALEEGLGRIKAF 413 (421)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~iRi~~~-----~~~e~l~~~~~~l~~~ 413 (421)
+.++.... .+.+.+.+.+.++||.+.||..|+. ..++|++++ .+.+++++++++|.+.
T Consensus 294 ~~~~~~~~----~~~~~l~~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 294 VYFENSAD----EIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EEESSCHH----HHHHHHHHHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EEecCccc----hhHHHHHHHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 88764210 1233444556778999999987654 357999886 4789999999998875
No 168
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=2.3e-30 Score=243.19 Aligned_cols=299 Identities=13% Similarity=0.077 Sum_probs=205.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCC--eEEEcCCCCcchHH---HHhhcC
Q 014631 80 DCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGA--NILLPKPGFPLYEA---NARHTR 154 (421)
Q Consensus 80 ~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd--~Vl~~~p~y~~~~~---~~~~~g 154 (421)
..|++..+..+|+++++++++ . +..++++||++++..+++++.++|| .|+++.+.|..... .+...|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~~------~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVLG------M--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHhC------C--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 467776778999999999984 2 2345557788899999999888888 66666666554332 345568
Q ss_pred ceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCc-ccccCHHHHHHHHHHHHhcCcEEEEccccccc--ccCC
Q 014631 155 LEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPC-GNVFTYQQLQKIAEKARKLGIMVISDEVYDHL--TFGS 231 (421)
Q Consensus 155 ~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~~~ 231 (421)
.+++.++. +++.+|++++++.. +++++++++|+||| |.+++.+++++|+++|++||+++|+|++|... .+.+
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 88877763 33468999999873 38899999999998 99999999999999999999999999998721 1112
Q ss_pred CCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc---cCCchHHHHHHHHHhhc
Q 014631 232 TPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---SGPATFVQGAVPQIFKN 308 (421)
Q Consensus 232 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~ 308 (421)
.....+. ...+ +++.|+||+|+.++. ||++++ +++++.+....... .......+.++..+++.
T Consensus 188 ~~~~~~~--~~~d--~~~~s~sK~~~~~~g--g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 253 (357)
T 3lws_A 188 KTAAEIA--GLFD--SIYISFYKGLGGIAG--AILAGP--------AAFCQTARIWKRRYGGDLISLYPYIVSADYYYEL 253 (357)
T ss_dssp CCHHHHH--TTSS--EEEEESSSTTCCSSC--EEEEEC--------HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred CChHHHH--hcCC--EEEEeccccCCCCce--EEEEcC--------HHHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 2222221 1112 447899999844332 888874 35666665443211 11122333333344432
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCC
Q 014631 309 TKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGM 388 (421)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 388 (421)
+.+. .+++.++++++.+.|+++|++.+...|..++|+|+.++.... .+..++ .+.+.++||.+.||..+..
T Consensus 254 ----~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~l~~~Gi~v~~g~~~~~ 324 (357)
T 3lws_A 254 ----RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKL-EQVQEETGLGFVGYLVDKD 324 (357)
T ss_dssp ----HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHH-HHHHHHHCEESCSCCEECS
T ss_pred ----HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHH-HHHHHhcCeEEecccccCC
Confidence 2222 334577888999999999898842357778899998864210 012344 4456778999999976653
Q ss_pred -CCeEEEEec-----CCHHHHHHHHHHHHHHH
Q 014631 389 -KNWLRITFA-----IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 389 -~~~iRi~~~-----~~~e~l~~~~~~l~~~~ 414 (421)
..++|++++ .+.+++++++++|.+++
T Consensus 325 ~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 325 GYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 238999986 47899999999998765
No 169
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=1.9e-29 Score=244.51 Aligned_cols=333 Identities=14% Similarity=0.095 Sum_probs=216.4
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAI 122 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al 122 (421)
+..++||+.|.+....++ .++.+.+++.+++.... .|+ +..++++.+++++.+.++ .+++|++++|+++|+
T Consensus 56 g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA~ 126 (453)
T 2cy8_A 56 GNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTETT 126 (453)
T ss_dssp CCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHHH
T ss_pred CCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHHH
Confidence 667899988875533333 78999999999987632 232 356899999999988764 578999999999999
Q ss_pred HHHHHH---hcCCCCeEEEcCCCCcchHHHHhh-----------cCce------eEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 123 QVILTV---LARPGANILLPKPGFPLYEANARH-----------TRLE------IRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 123 ~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
..+++. +.++ +.|++.+|+|+++...+.. .|.. +..++. .|++++++.+++
T Consensus 127 ~~al~~ar~~~~~-~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~~ 198 (453)
T 2cy8_A 127 LLALRVARAFTGR-RMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFANH 198 (453)
T ss_dssp HHHHHHHHHHHCC-CEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCC-CEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHhc
Confidence 999987 6554 6888999999976543322 1221 122221 388999988863
Q ss_pred --CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC
Q 014631 182 --NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI 257 (421)
Q Consensus 182 --~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 257 (421)
+++ +++++| +|+||.++ +.+++++|.++|++||+++|+||+|+++ +.|.. ..+..++...+ +.|+||.++
T Consensus 199 ~~~~~-~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK~l~ 272 (453)
T 2cy8_A 199 GSDIA-AFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPD---LTCLAKASA 272 (453)
T ss_dssp GGGEE-EEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCS---EEEEEGGGG
T ss_pred CCCEE-EEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCc---EEEEChhhh
Confidence 344 556776 47799765 6999999999999999999999999987 44432 12222222222 238999987
Q ss_pred CCCceEEEEEeeCCCcchhHHHHHHHHhh---h---cccccCCchHHHHHHHHHhhc-cchhHHHHHHHHHHHHHHHHHH
Q 014631 258 VPGWRLGWLVTSDPSGILQELRIVDSIKG---Y---LNISSGPATFVQGAVPQIFKN-TKEDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 258 ~~G~r~G~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
. |+|+||++++ +++++.+.. . ...+.+++++++.++.++|+. . . ++..++++++++++.+
T Consensus 273 ~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 273 G-GLPGGILGGR--------EDVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFARE 339 (453)
T ss_dssp T-TSSCEEEEEC--------HHHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHH
T ss_pred C-CcceEEEech--------HHHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHH
Confidence 4 8999999996 356666554 1 112346788888888888864 2 1 2344556666666666
Q ss_pred HhhcCC---CccccCCCCceeEEEEecCc-----c----ccc-----CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEE
Q 014631 331 RIKEIP---CITCPRKPEGSMFVMVKLNL-----S----LLE-----GISDDMEFALQLAKEESVIVLPGMAVGMKNWLR 393 (421)
Q Consensus 331 ~l~~~~---g~~~~~~~~~~~~~~~~~~~-----~----~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iR 393 (421)
.|+++. ++... .+..|.++|+.++. . ... ......++...+ .++||.+.|+ +.+|
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gv~v~~~------~~~~ 411 (453)
T 2cy8_A 340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMAL-ILEGVDIGGR------GSVF 411 (453)
T ss_dssp HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHH-HHTTEECBTT------TEEE
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHH-HHCCeEEeCC------CCEE
Confidence 665430 22211 23446688888863 1 000 000134566655 4679999653 2477
Q ss_pred EEecCCHHHHHHHHHHHHHHHHHhhh
Q 014631 394 ITFAIEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 394 i~~~~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
+++..+++++++++++|+++++++.+
T Consensus 412 l~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 412 LSAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 77668999999999999999987643
No 170
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.97 E-value=1.6e-28 Score=236.18 Aligned_cols=338 Identities=14% Similarity=0.061 Sum_probs=212.4
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
+.++|..+. .+.++.+.+++.+.+.+.....|+ .......+++...+++.+.+| .+. ..++++||
T Consensus 33 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~G 103 (425)
T 3ecd_A 33 SQVELIASE------NIVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGH-ANVQPHSG 103 (425)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSH
T ss_pred cceeeeccc------CCCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCC-ceeecCch
Confidence 457775543 134899999999887532111221 111111223222233433333 222 23458889
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCce--eEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLE--IRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPG 192 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~--~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~ 192 (421)
++++..++.+++++||+|+++.|+|++ +.......|.. ++.++.++ +++.+|++++++.+. ++++++++++|+
T Consensus 104 s~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 182 (425)
T 3ecd_A 104 AQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSA 182 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSC
T ss_pred HHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcccc
Confidence 999999999999999999999999987 22222244554 44454432 346799999999886 578999999999
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
||+. .++++|.++|++||+++|+||+|.. +.+.+.....+... .++++|+||++ +|.|+||+++++
T Consensus 183 ~~~~-----~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~~-----di~~~s~sK~l--~g~~~g~~~~~~- 249 (425)
T 3ecd_A 183 YPRK-----LDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEHA-----HVVTSTTHKTL--RGPRGGFVLTND- 249 (425)
T ss_dssp CCSC-----CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC-----SEEEEESSGGG--CCCSCEEEEESC-
T ss_pred CCCc-----CCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhcC-----cEEEecCCccc--CCCCcEEEEeCC-
Confidence 9643 4478999999999999999999644 33444332222221 17789999996 677899999864
Q ss_pred CcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 272 SGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
+++.+.+...... .++++.....++..++......++++..++++++++++.+.|.+. |+.+...+.++++
T Consensus 250 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 322 (425)
T 3ecd_A 250 ------EEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHL 322 (425)
T ss_dssp ------HHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred ------HHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceE
Confidence 2455555544322 224445455555444433234667888889999999999999885 7774322346778
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC------CCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG------MKNWLRITFA------IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~ 417 (421)
+|+.++... .+.+.+..+++++||.+.++..++ ..+.+|++++ .++++++++++.|++++++.
T Consensus 323 ~~~~~~~~~-----~~~~~~~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 323 LLVDLRPKG-----LKGAQVEQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEEECGGGT-----CCHHHHHHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC-----CCHHHHHHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 888876421 133445556688899999443221 2468999965 24899999999999998765
No 171
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=4.4e-29 Score=242.92 Aligned_cols=334 Identities=17% Similarity=0.153 Sum_probs=236.9
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC---CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP---SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~---~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..++.|+ +.+. +..+.+.+++.+... ..+.|.+ .+|..++++.+++++.+.+|.. . .+++++||++
T Consensus 66 ~~~~~lg-~~~~-----~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~--~-~~~~~~ggt~ 134 (474)
T 1wyu_B 66 TTFYPLG-SCTM-----KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMD--A-ITLEPAAGAH 134 (474)
T ss_dssp TSCCCBT-TTCC-----CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCS--E-EECCCSSHHH
T ss_pred cCccccc-cccc-----cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCC--c-eeecChHHHH
Confidence 3567787 5322 233556666665421 1234443 4566788888888888877643 2 4678899999
Q ss_pred HHHHHHHHh----cCCCC-----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 121 AIQVILTVL----ARPGA-----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 121 al~~~~~~l----~~~gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
++..++.++ .++|| +|+++.++|.++...+...|++++.++.+. ++.+|++++++.+++++++|++++|
T Consensus 135 a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~~--~~~~d~~~L~~~i~~~t~~v~~~~p 212 (474)
T 1wyu_B 135 GELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSGP--EGEVDLEALKRELGPHVAALMLTNP 212 (474)
T ss_dssp HHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBCT--TSSBCHHHHHHHCSTTEEEEEECSS
T ss_pred HHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCCC--CCCcCHHHHHHhhCCCceEEEEECC
Confidence 998755544 35787 999999999999999999999999998753 4679999999999888999999998
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCC-C---ceEEEEE
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVP-G---WRLGWLV 267 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~ 267 (421)
||||.+. +++++|+++|++||+++|+|++|..+.++ . .....++ ..+++.|+||+|+.+ | .|+||++
T Consensus 213 -n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g-~--~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~ 283 (474)
T 1wyu_B 213 -NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMG-W--ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVG 283 (474)
T ss_dssp -CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTT-T--CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEE
T ss_pred -CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhcc-C--CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEE
Confidence 6899872 46999999999999999999999876532 1 1222222 237788999998766 4 6999999
Q ss_pred eeCCCcchhHHHHHHHHhh-h-------------------cccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 268 TSDPSGILQELRIVDSIKG-Y-------------------LNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~-~-------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
+++ ++++.+.. . .....+.+...+.++..++.....+++++..+++.+++++
T Consensus 284 ~~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~ 355 (474)
T 1wyu_B 284 VKA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARY 355 (474)
T ss_dssp ECG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EcH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 964 23333321 0 0011245667777777777643456788888999999999
Q ss_pred HHHHhhcCCCccccCCCCceeE-EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC--CCCeEEEEec--CCHHH
Q 014631 328 CYDRIKEIPCITCPRKPEGSMF-VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--MKNWLRITFA--IEPSA 402 (421)
Q Consensus 328 ~~~~l~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~iRi~~~--~~~e~ 402 (421)
+.+.|+++ |+.+. .+...+. +|+.++. ..+..++..+|+ ++||.+ ++..|. ..+++|++++ +++++
T Consensus 356 l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~~L~-~~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~ 426 (474)
T 1wyu_B 356 LKELLKEK-GYRVP-YDGPSMHEFVAQPPE-----GFRALDLAKGLL-ELGFHP-PTVYFPLIVKEALMVEPTETEAKET 426 (474)
T ss_dssp HHHHHHHT-TCBCS-SCSSCCSCEEEBCST-----TCCHHHHHHHHH-HTTCCC-CEESCSTTSTTCEEECCCTTSCHHH
T ss_pred HHHHHhhc-CcEec-CCCCcceEEEEEcCC-----CCCHHHHHHHHH-HCCccc-cccccccccCCEEEEEeecCCCHHH
Confidence 99999987 87732 2322221 5555521 124667777765 559985 555553 3678999998 48999
Q ss_pred HHHHHHHHHHHHHH
Q 014631 403 LEEGLGRIKAFCQR 416 (421)
Q Consensus 403 l~~~~~~l~~~~~~ 416 (421)
+++++++|++++++
T Consensus 427 id~~~~~L~~~~~~ 440 (474)
T 1wyu_B 427 LEAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988753
No 172
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.97 E-value=2.5e-28 Score=230.82 Aligned_cols=314 Identities=11% Similarity=0.093 Sum_probs=224.5
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh---cCCCCeEE
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL---ARPGANIL 137 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---~~~gd~Vl 137 (421)
+.++.+.+++.+.+... .|.+.....++++.++++++ . +++++|+|+++++..++.++ .++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSK---QLTQGKRSLLFEEALCEFLG------V--KHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSS---CCSSSHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcC---cccCChHHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 56789999999998753 23344557899999999984 2 28999999999999999999 88999999
Q ss_pred EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631 138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
++.|+|+++...+...|++++.++++++. .+|++++++.++++++++++++| ||.+.+ +++|.++|++||++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKNDG--NIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTTS--SBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCCC--CCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 99999999999999999999999876432 68999999999888888887776 999865 78899999999999
Q ss_pred EEEcccccccccCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccc----
Q 014631 218 VISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNIS---- 291 (421)
Q Consensus 218 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 291 (421)
+|+|++|+.+..... ..+..+. .+++.|+| |+++. | +|++++.++ +++.+.+.......
T Consensus 151 li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 215 (375)
T 2fnu_A 151 FLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFRSHGMLKK 215 (375)
T ss_dssp EEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHTBTTEEES
T ss_pred EEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHHhcCCccc
Confidence 999999987542111 1121111 26677888 99755 6 788887421 24555554432110
Q ss_pred -------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-----CceeEEEEe
Q 014631 292 -------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-----EGSMFVMVK 353 (421)
Q Consensus 292 -------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-----~~~~~~~~~ 353 (421)
...+.+...+.... ..++++..++.+++++++.+.|+++|++.+. .+ ..++++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~a~~~~~-----~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~ 289 (375)
T 2fnu_A 216 DFFEGEVKSIGHNFRLNEIQSALGLSQ-----LKKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPIL 289 (375)
T ss_dssp SSSCEEESSCCCBCCCCHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEE
T ss_pred cccccccccccccCCCCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEE
Confidence 12222222222111 2456778888999999999999998888733 33 123455777
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCC-------CC-------C-------CCeEEEEec--CCHHHHHHHHHHH
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMA-------VG-------M-------KNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~-------~-------~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
++.... .+..++...| .++||.+..+.. |+ . .+++|++++ +++++++++++.|
T Consensus 290 ~~~~~~---~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 365 (375)
T 2fnu_A 290 MHQKFF---TCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSV 365 (375)
T ss_dssp ECGGGG---GGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred eCcccc---chHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence 763210 0245566655 677999983211 11 1 157999998 6899999999999
Q ss_pred HHHHHHhh
Q 014631 411 KAFCQRHA 418 (421)
Q Consensus 411 ~~~~~~~~ 418 (421)
++++++++
T Consensus 366 ~~~~~~~~ 373 (375)
T 2fnu_A 366 LKTFESFK 373 (375)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHhc
Confidence 99987653
No 173
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.97 E-value=2.7e-29 Score=242.20 Aligned_cols=337 Identities=14% Similarity=0.092 Sum_probs=221.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|.+....++ .++.+.+++.+++.+.....| +.....++++.+++++ + .+++|++++|+++|
T Consensus 54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~-~~~~~~~l~~~la~~~----~---~~~~v~~~~sgseA 124 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGA-PGEAEVLLAEKILGYV----K---RGGMIRFVNSGTEA 124 (434)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-CCHHHHHHHHHHHHHH----C---TTCEEEEESSHHHH
T ss_pred CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCC-CCHHHHHHHHHHHHhC----C---CCCEEEEeCCHHHH
Confidence 4678899988875433333 789999999999987432233 2212234555555544 2 46899999999999
Q ss_pred HHHHHHH---hcCCCCeEEEcCCCCcchHHHHh-h-------------cCc------eeEeeeccCCCCccCCHHHHHhh
Q 014631 122 IQVILTV---LARPGANILLPKPGFPLYEANAR-H-------------TRL------EIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 122 l~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+..+++. +. +++.|++.+|+|+++...+. . .|. .+..++. .|++++++.
T Consensus 125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 9999987 44 45788898999988654332 1 122 1333332 278999988
Q ss_pred hcc--CceEEEEeCC-CCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 179 ADE--NTVAMVIVNP-GNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 179 ~~~--~~~~i~~~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
+++ +..++++++| +|+||.++ +++.+++|.++|++||+++|+||+|+++ +.|.. .....++...+ +.||||
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~d---i~s~sK 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGD---IIVLGK 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCS---EEEEEG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCC---eeeecc
Confidence 863 2334556667 56799876 6899999999999999999999999977 33432 12222222222 348999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
.++. |+|+||++++ +++++.+.... ..+.+.+++++.++.++|+...+ ++..++++++++++.+
T Consensus 272 ~l~~-G~~~G~v~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~ 339 (434)
T 2epj_A 272 IIGG-GFPVGAVAGS--------REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE 339 (434)
T ss_dssp GGGT-TSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred hhcC-Ccceeeeeec--------HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 9876 8999999986 35666665421 12346788888888888764221 2345666667777777
Q ss_pred HhhcCC---CccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631 331 RIKEIP---CITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399 (421)
Q Consensus 331 ~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~ 399 (421)
.|+++. ++... .+..|.++|+.++..... ......++...+ .++||.+.||.. ..+|+++..+
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t 413 (434)
T 2epj_A 340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEM-LRRGVFIAPSNL----EAVFTGLPHQ 413 (434)
T ss_dssp HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCS
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHH-HHCCeEEeccCC----CcEEEeccCC
Confidence 766531 33211 233466888888641000 000134566555 567999998752 3467776689
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 014631 400 PSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~~ 418 (421)
++++++++++|+++++++.
T Consensus 414 ~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 414 GEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999988763
No 174
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.97 E-value=5.5e-29 Score=239.57 Aligned_cols=345 Identities=13% Similarity=0.069 Sum_probs=218.0
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.+++||..|.+....+ ..+|.+.+++.+++++... |.. ..+++..+++++.+.++ ++++|++++|++++
T Consensus 50 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~~---~~~~~~~la~~l~~~~~---~~~~v~~~~ggsea 120 (427)
T 3fq8_A 50 DGNRYIDYVGTWGPAICG-HAHPEVIEALKVAMEKGTS--FGA---PCALENVLAEMVNDAVP---SIEMVRFVNSGTEA 120 (427)
T ss_dssp TSCEEEESSGGGTTCTTC-BTCHHHHHHHHHHHTTCSC--CSS---CCHHHHHHHHHHHHHST---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhhhccC-CCCHHHHHHHHHHHHhCCC--cCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 478899999887553322 3689999999999877432 322 24566666666666554 57899999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-CceeEeeeccCCCCcc------------CCHHHHHhhhcc---Cc
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANARHT-RLEIRHFDLLPEKGWE------------VDLDGLEALADE---NT 183 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~d~e~l~~~~~~---~~ 183 (421)
+..+++... ..+++|++.+++|+++...+... +.....++.....++. -|++++++.+.+ ++
T Consensus 121 ~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 200 (427)
T 3fq8_A 121 CMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPYNDLEAVKALFAENPGEI 200 (427)
T ss_dssp HHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEETTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCCCCHHHHHHHHHhCCCCE
Confidence 999995432 23478999999998865444332 2111111111111100 188999998865 44
Q ss_pred eEEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 184 VAMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 184 ~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
+++++..++|++|.+.+ .+.+++|.++|++||+++|+||+|+++ +.|... ....++...+ +.||||.|+ +|+|
T Consensus 201 ~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 274 (427)
T 3fq8_A 201 AGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPD---LTTLGKIIG-GGLP 274 (427)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCS---EEEECGGGG-TTSS
T ss_pred EEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCC---hhhhhhhhh-CCcc
Confidence 44444444677787655 566999999999999999999999987 555422 2222222212 358899987 7999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+||++++ +++++.+.... ..+.+.+++++.++.++++... +...++.++..+..++.+.+.+.+. +
T Consensus 275 ~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 345 (427)
T 3fq8_A 275 VGAYGGK--------REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLLAIAQET-G 345 (427)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred eEEEEEc--------HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 9999885 45777665421 2234668899999888886422 2333333333333333344333333 2
Q ss_pred ccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGR 409 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~ 409 (421)
+. ...+..|+++|+.+...... ......++...+ .++||.+.|+.. ..+|+++..+++++++++++
T Consensus 346 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e~i~~~l~~ 419 (427)
T 3fq8_A 346 HA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEEDIDATLAA 419 (427)
T ss_dssp CC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHHH
T ss_pred CC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHHHHHHHHHH
Confidence 22 11234467888887542110 000023455554 567999998753 24555555899999999999
Q ss_pred HHHHHHH
Q 014631 410 IKAFCQR 416 (421)
Q Consensus 410 l~~~~~~ 416 (421)
|++++++
T Consensus 420 l~~~l~~ 426 (427)
T 3fq8_A 420 ARTVMSA 426 (427)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9999875
No 175
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=2.9e-28 Score=236.02 Aligned_cols=337 Identities=14% Similarity=-0.002 Sum_probs=235.0
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC---CcEEEcCCHHHHHHHHHHHhcC------
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP---DDVYLTAGCKQAIQVILTVLAR------ 131 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~---~~i~~~~g~~~al~~~~~~l~~------ 131 (421)
+.++.+.+++.+.+... ..+|...++..++++.+++++.+.+|.+.+. ..+++|+|+++++..++.++.+
T Consensus 53 ~~~~~v~e~~~~a~~~~-~~~~~~~~~~~~l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~ 131 (452)
T 2dgk_A 53 WDDENVHKLMDLSINKN-WIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRM 131 (452)
T ss_dssp CCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHhccC-CCChhhChhHHHHHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHH
Confidence 45578889988887653 2345555667789999999998888854322 2489999999999999887753
Q ss_pred --CC-----CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHH
Q 014631 132 --PG-----ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 132 --~g-----d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l 204 (421)
+| ++|++++ .|.++...+...|++++.+++++ +++.+|+++|++.+++++++|++++|+||||.+ .++
T Consensus 132 ~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l 206 (452)
T 2dgk_A 132 EAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQLFMDPKRMIEACDENTIGVVPTFGVTYTGNY---EFP 206 (452)
T ss_dssp HHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBB---CCH
T ss_pred HhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CCCeECHHHHHHHHhhCCEEEEEEcCCcCCccc---CCH
Confidence 55 5899999 99999999999999999998764 357899999999998889999999999999999 558
Q ss_pred HHHHHHHHhc------CcEEEEccccccccc---CCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch
Q 014631 205 QKIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL 275 (421)
Q Consensus 205 ~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 275 (421)
++|.++|+++ |+++++|++|+.+.. .+.....+ ...+-.++..|++|+ +..|.++||++++++...
T Consensus 207 ~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~- 281 (452)
T 2dgk_A 207 QPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF---RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL- 281 (452)
T ss_dssp HHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST---TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS-
T ss_pred HHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc---CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH-
Confidence 8888999995 999999999998642 22111111 111123456788996 778899999999653211
Q ss_pred hHHHHHHHHhhhcc----------cccCC---chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 276 QELRIVDSIKGYLN----------ISSGP---ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 276 ~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
.+.+..... ..++. ..+.+.++...+ ...+++++.++..++++++.+.|++++++.++
T Consensus 282 -----~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~l---g~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~- 352 (452)
T 2dgk_A 282 -----PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRL---GREGYTKVQNASYQVAAYLADEIAKLGPYEFI- 352 (452)
T ss_dssp -----CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-
T ss_pred -----HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-
Confidence 121111000 01111 223333333333 34668888999999999999999998888743
Q ss_pred CC----CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC---CCCCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 343 KP----EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV---GMKNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 343 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
.| ....++.+.++.... ...+..++...| .++|+.+...... ....++|++++ +++++++++++.|+++
T Consensus 353 ~~~~~~~~~~~v~f~~~~~~~-~~~~~~~l~~~L-~~~Gi~v~~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~ 430 (452)
T 2dgk_A 353 CTGRPDEGIPAVCFKLKDGED-PGYTLYDLSERL-RLRGWQVPAFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKAS 430 (452)
T ss_dssp EECCTTTBSSEEEEEECTTCC-CSCCHHHHHHHH-HHTTCBCCEEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHH
T ss_pred cCCCCCCCeEEEEEEecCccc-ccCCHHHHHHHH-HhcCCeeeeeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 33 233455566653100 001235666665 5679965432211 12458999998 6799999999999999
Q ss_pred HHHhhh
Q 014631 414 CQRHAK 419 (421)
Q Consensus 414 ~~~~~~ 419 (421)
++++++
T Consensus 431 ~~~~~~ 436 (452)
T 2dgk_A 431 LKYLSD 436 (452)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 877653
No 176
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.97 E-value=6.5e-29 Score=238.81 Aligned_cols=333 Identities=13% Similarity=0.084 Sum_probs=222.3
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|.+....++ .++.+.+++.+++++.. .|+ +..++++.+++++.++++ .+++|++++|+++|
T Consensus 50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~--~~~---~~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGL--TFG---APSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA 120 (424)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCS--CCS---SCCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 3678899988865433333 78999999999998742 232 224566666666666553 47899999999999
Q ss_pred HHHHHHH---hcCCCCeEEEcCCCCcchHHHHhh--------------cCc------eeEeeeccCCCCccCCHHHHHhh
Q 014631 122 IQVILTV---LARPGANILLPKPGFPLYEANARH--------------TRL------EIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 122 l~~~~~~---l~~~gd~Vl~~~p~y~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
+..+++. +.+ ++.|++.+|+|+++...+.. .|. ++..++. .|++++++.
T Consensus 121 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 121 TMSALRLARGYTG-RPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHHC-CCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 9999986 444 57899999999986543321 121 1222221 278999888
Q ss_pred hcc--CceEEEEeCCCCC-ccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEccccc
Q 014631 179 ADE--NTVAMVIVNPGNP-CGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSK 254 (421)
Q Consensus 179 ~~~--~~~~i~~~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 254 (421)
+++ +..++++++|+|+ ||.++ +++.+++|.++ ++||+++|+||+|+++ +.|.. .....++...++ .||||
T Consensus 193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK 266 (424)
T 2e7u_A 193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFG-GATELLGLKPDL---VTLGK 266 (424)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTT-HHHHHHTCCCSE---EEECG
T ss_pred HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchh-HHHHHhCCCcch---hhhhh
Confidence 763 3345667788654 89765 78999999999 9999999999999987 44432 122222222222 38999
Q ss_pred ccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----ccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHH
Q 014631 255 RWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----NISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYD 330 (421)
Q Consensus 255 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 330 (421)
+++ +|+|+||++++ +++++.+.... ..+.+.+++++.++.++++...+ .++..++++++++++.+
T Consensus 267 ~l~-~G~~~G~~~~~--------~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~ 335 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGR--------REIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEA 335 (424)
T ss_dssp GGG-TTSSCEEEEEC--------HHHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEc--------HHHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence 987 59999999996 35666665521 12346788888888888864221 14456667777777777
Q ss_pred HhhcC---CCccccCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCC
Q 014631 331 RIKEI---PCITCPRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIE 399 (421)
Q Consensus 331 ~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~ 399 (421)
.|+++ .++... .+..|.++|+.++..... ......++...+ .++||.+.|+.. ..+|+++..+
T Consensus 336 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~----~~~~~~~~~t 409 (424)
T 2e7u_A 336 GLKEVLKEKGLPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGL-LDRGIYWPPSNF----EAAFLSVAHR 409 (424)
T ss_dssp HHHHHHHHTTCCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HTTTEECCSSSS----SCEECCTTCC
T ss_pred HHHHHHHhCCCceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHH-HHCCeEEeccCC----CceEeeccCC
Confidence 77653 133211 233466888888641000 000133566655 468999998752 3477776689
Q ss_pred HHHHHHHHHHHHHHH
Q 014631 400 PSALEEGLGRIKAFC 414 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~ 414 (421)
++++++++++|++++
T Consensus 410 ~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 410 EEDVEKTLEALRKAL 424 (424)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998763
No 177
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.97 E-value=1.8e-29 Score=244.13 Aligned_cols=334 Identities=14% Similarity=0.141 Sum_probs=220.7
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHH-H-HHHH---HHhcCCCCCCC---CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAA-D-AVVD---AVRSAEFDCYS---PSVGILPARRAIADYLNSELPCKLSPDDVYL 114 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~~~y~---~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~ 114 (421)
|..++||..|.+....+ +.+|.+. + ++.+ ++.... .|+ +.....++++.+++++ + ...+++|++
T Consensus 53 g~~ylD~~~~~~~~~lG-~~~p~v~~~~A~~~~~~~~~~~~--~~~~~~~~~~~~~la~~la~~~----~-~~~~~~v~~ 124 (449)
T 2cjg_A 53 GRRYLDMFTFVASSALG-MNPPALVDDREFHAELMQAALNK--PSNSDVYSVAMARFVETFARVL----G-DPALPHLFF 124 (449)
T ss_dssp CCEEEESSHHHHTCSSC-BSCHHHHTCHHHHHHHHHHHTCC--CCTTTCCCHHHHHHHHHHHHHH----C-CTTCCEEEE
T ss_pred CcEEEEccCCccccCCC-CCCHHHHHHHHHHHHHHHHHhcC--CCCcccCCHHHHHHHHHHHHhc----C-CCCCCEEEE
Confidence 56788887776543322 2589999 8 9999 776632 222 1111245555555554 3 245789999
Q ss_pred cCCHHHHHHHHHHHhc---C----------C-CCeEEEcCCCCcchHHHHhhcC---------c-----eeEeeeccCCC
Q 014631 115 TAGCKQAIQVILTVLA---R----------P-GANILLPKPGFPLYEANARHTR---------L-----EIRHFDLLPEK 166 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~---~----------~-gd~Vl~~~p~y~~~~~~~~~~g---------~-----~~~~~~~~~~~ 166 (421)
++|+++|++.+++.+. + + ||+|++.+|+|+++...+...+ . ++..++.+...
T Consensus 125 ~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 204 (449)
T 2cjg_A 125 VEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPG 204 (449)
T ss_dssp ESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTT
T ss_pred eCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCch
Confidence 9999999999987543 2 2 8999999999998755432222 1 34444443200
Q ss_pred Cc--------cCCHHHHHhhhc---cCceEEEEeCC-CCCcc-cccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCC
Q 014631 167 GW--------EVDLDGLEALAD---ENTVAMVIVNP-GNPCG-NVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTP 233 (421)
Q Consensus 167 ~~--------~~d~e~l~~~~~---~~~~~i~~~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 233 (421)
.. ..+++++++.++ +++++ ++++| +||+| ..++.+++++|.++|++||+++|+||+|+++.+.|..
T Consensus 205 ~~~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~ 283 (449)
T 2cjg_A 205 LDEPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTA 283 (449)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS
T ss_pred hhccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcc
Confidence 11 245666888774 45555 45666 68999 5889999999999999999999999999988776652
Q ss_pred cccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHH-----hhh-cccccCCchHHHHHHHHHhh
Q 014631 234 YVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSI-----KGY-LNISSGPATFVQGAVPQIFK 307 (421)
Q Consensus 234 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~l~ 307 (421)
. .+..++...+++ ||||.+ |+||+++++ ++++.+ ... ...+.+.+++++.++.++|+
T Consensus 284 ~-~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~ 346 (449)
T 2cjg_A 284 W-AYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILE 346 (449)
T ss_dssp S-THHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHH
T ss_pred e-eecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHH
Confidence 2 222222222233 789996 689999863 244431 111 12345778899999888886
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHhhc----CCC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 308 NTKEDFFSKIVDILRDTADICYDRIKE----IPC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~~~~~~~l~~----~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
...+ ++..++++++++++.+.|++ +|. +..+ .+. |.|+++.++... ...+++..++ ++||.+.|
T Consensus 347 ~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~-~~~-g~~~~~~~~~~~-----~~~~~~~~l~-~~Gv~v~~ 415 (449)
T 2cjg_A 347 VIEA---EGLFERAVQHGKYLRARLDELAADFPAVVLDP-RGR-GLMCAFSLPTTA-----DRDELIRQLW-QRAVIVLP 415 (449)
T ss_dssp HHHH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSEEE-EEE-TTEEEEECSSHH-----HHHHHHHHHH-HTTEECEE
T ss_pred HHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCceeeE-eec-cEEEEEEECChH-----HHHHHHHHHH-HCCeEEec
Confidence 4222 23456667777777777764 344 4312 333 556677776321 2456776665 67999999
Q ss_pred CCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 383 GMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 383 g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+. .+++|++++ ++++++++++++|+++++++
T Consensus 416 ~g----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 416 AG----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred CC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 73 479999776 79999999999999998764
No 178
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.97 E-value=1.4e-28 Score=237.76 Aligned_cols=337 Identities=15% Similarity=0.078 Sum_probs=223.2
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCC---CCCHHHH--HHHH-HHHhhhCCCCCCCCcEEE-cCC
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPS---VGILPAR--RAIA-DYLNSELPCKLSPDDVYL-TAG 117 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~---~g~~~l~--~~ia-~~l~~~~~~~~~~~~i~~-~~g 117 (421)
+.|+|..+. + +.++.+.+++.+.+.+.....|+.. .|...++ +.++ +++.+.+| .+ .+.+ ++|
T Consensus 46 ~~i~l~~~~-~-----~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g--~~--~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE-N-----FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFG--AE--FANVQPHS 115 (447)
T ss_dssp HSEECCTTC-C-----CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CS--EEECCCSS
T ss_pred CceeEecCC-C-----CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcC--CC--ceEEEeCC
Confidence 567774432 2 3589999999888754322233322 2444443 4444 55555444 22 2444 788
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcchH-HH--Hhh--cCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPLYE-AN--ARH--TRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNP 191 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~-~~--~~~--~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p 191 (421)
|++++..++.+++++||+|++++|+|.++. .. ... .+..++.+++++ +++.+|++++++.+. .+++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDP-ATHLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCT-TTCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCc-ccCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 899999999999999999999999997732 11 112 233455555543 345789999999885 46788888899
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
+||++. ++++|.++|++||+++|+|++|.. +.+.|.....+. . ..+++.|+||++ +|+|.||+++++
T Consensus 195 ~~~~~~-----~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~~---~--~di~~~s~sK~l--~G~~gG~i~~~~ 262 (447)
T 3h7f_A 195 AYPRVL-----DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPVP---H--ADVVSTTVHKTL--GGGRSGLIVGKQ 262 (447)
T ss_dssp SCCSCC-----CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTT---T--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred CCCCcc-----CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCCC---C--CcEEEecCCcCC--CCCCeEEEEECH
Confidence 999876 589999999999999999999743 334343222221 1 127789999996 478899999863
Q ss_pred CCcchhHHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CCccccCCC
Q 014631 271 PSGILQELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PCITCPRKP 344 (421)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g~~~~~~~ 344 (421)
++.+.+..... ..++++...+.++..++......++++..+++.++++++.+.|.+. +|+.++..+
T Consensus 263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~ 334 (447)
T 3h7f_A 263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG 334 (447)
T ss_dssp --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence 34555544322 2234444445555555544334567888889999999999999875 577644334
Q ss_pred CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE----eC--CCCCCCCeEEEEec------CCHHHHHHHHHHHHH
Q 014631 345 EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL----PG--MAVGMKNWLRITFA------IEPSALEEGLGRIKA 412 (421)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g--~~~~~~~~iRi~~~------~~~e~l~~~~~~l~~ 412 (421)
..++++|+.+.... .+.+.+..+++++||.+. |+ ..+..++++|+++. .++++++++++.|.+
T Consensus 335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 56778888775321 134556667788899998 65 23334678999985 468999999999999
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
++++.
T Consensus 410 ~l~~~ 414 (447)
T 3h7f_A 410 ALATG 414 (447)
T ss_dssp HHHSG
T ss_pred HHhcc
Confidence 98654
No 179
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.97 E-value=1.1e-28 Score=235.74 Aligned_cols=332 Identities=13% Similarity=0.072 Sum_probs=223.2
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC------CCCCCHHHHH----HHHHHHhhhCCCCCCCCcEE
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS------PSVGILPARR----AIADYLNSELPCKLSPDDVY 113 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~------~~~g~~~l~~----~ia~~l~~~~~~~~~~~~i~ 113 (421)
..+++++.+. +.++.+.+++.+.+.+.....|+ ......++++ .+++++ | .+++.++
T Consensus 24 ~~~~~~~~~~-------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~----g--~~~~~i~ 90 (405)
T 2vi8_A 24 AKIELIASEN-------FVSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF----G--AEHANVQ 90 (405)
T ss_dssp HSEECCTTCC-------CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH----T--CSEEECC
T ss_pred cceeeccCcc-------cCCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh----C--CCceEEE
Confidence 4567775543 33899999999887532111221 1112345554 566655 3 3343344
Q ss_pred EcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH-H--HhhcCc--eeEeeeccCCCCccCCHHHHHhhhcc-CceEEE
Q 014631 114 LTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA-N--ARHTRL--EIRHFDLLPEKGWEVDLDGLEALADE-NTVAMV 187 (421)
Q Consensus 114 ~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~-~--~~~~g~--~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~ 187 (421)
+++| ++++..++.++.++||+|+++.|+|.++.. . +...|. +++.+++++ .++.+|++++++.+.+ ++++++
T Consensus 91 ~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~ 168 (405)
T 2vi8_A 91 PHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLIV 168 (405)
T ss_dssp CSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEEE
T ss_pred ecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEEE
Confidence 4555 999999999999999999999999987743 1 123343 666666542 3567899999998875 777776
Q ss_pred EeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccC-CCCceEEEE
Q 014631 188 IVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI-VPGWRLGWL 266 (421)
Q Consensus 188 ~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~ 266 (421)
+ +|+|. |.. .++++|.++|++||+++|+||+|+.+..... ... ..+.. ..++++|+||+|+ +.| ||+
T Consensus 169 ~-~~~~~-~~~---~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~-~~~-~~~~~--~di~~~s~sK~~~g~~g---G~~ 236 (405)
T 2vi8_A 169 A-AAAAY-PRI---IDFAKFREIADEVGAYLMVDMAHIAGLVAAG-LHP-NPVPY--AHFVTTTTHKTLRGPRG---GMI 236 (405)
T ss_dssp E-CCSSC-CSC---CCHHHHHHHHHHHTCEEEEECTTTHHHHHTT-SSC-CSTTT--CSEEEEESSSTTCCCSC---EEE
T ss_pred E-eCCCC-Ccc---CCHHHHHHHHHHcCCEEEEEccccccccccC-cCC-Ccccc--CCEEEEeccccCCCCCC---eEE
Confidence 5 55553 444 3489999999999999999999995332111 111 11111 1278899999986 455 999
Q ss_pred EeeCCCcchhHHHHHHHHhhhcc-c-ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC
Q 014631 267 VTSDPSGILQELRIVDSIKGYLN-I-SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP 344 (421)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~ 344 (421)
+++ +++.+.+..... . .+++++....++.++++.....++++..++++++++++.+.|+++ |+.+. .|
T Consensus 237 ~~~--------~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~ 306 (405)
T 2vi8_A 237 LCQ--------EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-SG 306 (405)
T ss_dssp EEC--------HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-GG
T ss_pred EEc--------HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-cC
Confidence 985 346666655432 2 234455555555566654334578888999999999999999988 87733 43
Q ss_pred -CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC----CC--CCCeEEEEecC------CHHHHHHHHHHHH
Q 014631 345 -EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA----VG--MKNWLRITFAI------EPSALEEGLGRIK 411 (421)
Q Consensus 345 -~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----~~--~~~~iRi~~~~------~~e~l~~~~~~l~ 411 (421)
..++++|+.++... .+..++... +.++||.+.+|.. +. ..+++|++++. +++++++++++|+
T Consensus 307 ~~~~~~~~~~~~~~~----~~~~~~~~~-l~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l~ 381 (405)
T 2vi8_A 307 GTDNHLLLVDLRPQQ----LTGKTAEKV-LDEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAIIG 381 (405)
T ss_dssp SCSSSEEEEECGGGT----CCHHHHHHH-HHHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHH
T ss_pred CCCceEEEEEccCCC----CCHHHHHHH-HHHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHHH
Confidence 45788999886421 134555554 4778999999863 22 25689999983 7999999999999
Q ss_pred HHHHHh
Q 014631 412 AFCQRH 417 (421)
Q Consensus 412 ~~~~~~ 417 (421)
+++++.
T Consensus 382 ~~~~~~ 387 (405)
T 2vi8_A 382 LVLKNV 387 (405)
T ss_dssp HHHTCT
T ss_pred HHHhcc
Confidence 998664
No 180
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.97 E-value=7.1e-29 Score=238.87 Aligned_cols=345 Identities=13% Similarity=0.042 Sum_probs=213.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|..++||..|...... ...+|.+.+++.+++++.....| +.....++++.+++++ + .++++++++||+++
T Consensus 51 ~g~~ylD~~~~~~~~~l-G~~~p~v~~A~~~~~~~~~~~~~-~~~~~~~la~~l~~~~----~---~~~~v~~~~sGsea 121 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMIL-GHNHPAIRQAVIEAVERGLSFGA-PTEMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESSGGGTTCTT-CBTCHHHHHHHHHHHTTCSCCSS-CCHHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhcccc-CCCCHHHHHHHHHHHHhCcccCC-CCHHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence 47889999888654322 23689999999999987432233 3333345555555554 2 47899999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHhh-cCceeE--eeeccCC------CC---c-cCCHHHHHhhhcc--Cce
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANARH-TRLEIR--HFDLLPE------KG---W-EVDLDGLEALADE--NTV 184 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~--~~~~~~~------~~---~-~~d~e~l~~~~~~--~~~ 184 (421)
++.+++... ..++.|++.+++|+++...+.. .+.... ..+.... .. . .-|++++++.+.+ ...
T Consensus 122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 999998543 2557899999999987542211 111000 0000000 00 0 0178999988863 334
Q ss_pred EEEEeCCCCCcc-cc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCce
Q 014631 185 AMVIVNPGNPCG-NV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWR 262 (421)
Q Consensus 185 ~i~~~~p~nptG-~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 262 (421)
++++++|+|++| .+ .+.+.+++|.++|++||+++|+||+|+++ +.|... ....++...+ +.||||.++ +|+|
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~~-~~~~~~~~pd---i~t~sK~~~-~G~~ 275 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALAG-AQDYYHVIPD---LTCLGKIIG-GGMP 275 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTTC-HHHHTTCCCS---EEEEEGGGG-TTSC
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcch-HHHhcCCCCC---eeeeccccc-CCCC
Confidence 566788866554 44 34566999999999999999999999987 555422 2222332222 248999987 7999
Q ss_pred EEEEEeeCCCcchhHHHHHHHHhhh----cccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014631 263 LGWLVTSDPSGILQELRIVDSIKGY----LNISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPC 337 (421)
Q Consensus 263 ~G~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g 337 (421)
+||++++ +++++.+... ...+.+.+++++.++.++|+... +...++.++.....++.+.+.+.++ +
T Consensus 276 ~G~~~~~--------~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~ 346 (429)
T 4e77_A 276 VGAFGGR--------REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE-N 346 (429)
T ss_dssp CEEEEEC--------HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred eEEEEEC--------HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 9999985 4576666542 22344788899999888886422 2333333333334444444444444 3
Q ss_pred ccccCCCCceeEEEEecCcccc---------cCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHH
Q 014631 338 ITCPRKPEGSMFVMVKLNLSLL---------EGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLG 408 (421)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~ 408 (421)
+. ...+..|.++++.++.... +......+++..+ .++||.+.|+.. ..+|+++..++++++++++
T Consensus 347 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~ 420 (429)
T 4e77_A 347 IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLM-LEEGVYLAPSAF----EAGFMSLAHSNEDIQKTVN 420 (429)
T ss_dssp CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHH-HHCCeEEeecCC----CCEEEeccCCHHHHHHHHH
Confidence 22 1133456788888864200 0000114566555 566999998753 3567766689999999999
Q ss_pred HHHHHHHH
Q 014631 409 RIKAFCQR 416 (421)
Q Consensus 409 ~l~~~~~~ 416 (421)
+|++++++
T Consensus 421 ~l~~~l~~ 428 (429)
T 4e77_A 421 AARRCFAK 428 (429)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99998754
No 181
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.97 E-value=3.6e-29 Score=236.52 Aligned_cols=313 Identities=16% Similarity=0.144 Sum_probs=217.1
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEcC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLPK 140 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~~ 140 (421)
.++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++|+..++.++ .++||+|+++.
T Consensus 15 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~ 83 (373)
T 3frk_A 15 IEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN--------VNYCIGCGNGLDALHLILKGYDIGFGDEVIVPS 83 (373)
T ss_dssp HHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT--------SSEEEEESCHHHHHHHHHHHTTCCTTCEEEEET
T ss_pred CCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC--------CCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECC
Confidence 4677888888887763 46666778999999999984 248999999999999999999 89999999999
Q ss_pred CCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 141 PGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 141 p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
++|+++...+...|++++.++++++ ++.+|++++++.+++++++++ |+||||... ++++|.++|+++|+++|+
T Consensus 84 ~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~---~l~~i~~l~~~~~~~li~ 156 (373)
T 3frk_A 84 NTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPA---DMDEIKRIAKKYNLKLIE 156 (373)
T ss_dssp TSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCC---CHHHHHHHHHHHTCEEEE
T ss_pred CCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCcc---cHHHHHHHHHHcCCEEEE
Confidence 9999999999999999999988643 467899999999988887776 778999984 578899999999999999
Q ss_pred cccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-------
Q 014631 221 DEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI------- 290 (421)
Q Consensus 221 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~------- 290 (421)
|++|+.+. +.+. .+..+ . .+.+.||| |.++.+|. .|++++++ +++.+.+......
T Consensus 157 D~a~~~g~~~~~~---~~~~~-~---d~~~~S~~~~K~l~~~g~-gg~~~~~~-------~~~~~~~~~~~~~g~~~~~~ 221 (373)
T 3frk_A 157 DAAQAHGSLYKGM---KVGSL-G---DAAGFSFYPAKNLGSLGD-GGAVVTND-------KDLAEKIKALSNYGSEKKYH 221 (373)
T ss_dssp ECTTCTTCEETTE---ETTSS-S---SEEEEECCTTSSSCCSSS-CEEEEESC-------HHHHHHHHHHHBTTCSBTTB
T ss_pred ECCcccCCEECCE---ecccc-c---cEEEEeCcCCCccCccce-eEEEEeCC-------HHHHHHHHHHHhcCcccCCc
Confidence 99998643 2221 11111 1 26677877 88654343 78888754 2355555433221
Q ss_pred ------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCC
Q 014631 291 ------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISD 364 (421)
Q Consensus 291 ------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (421)
....+.+...+....+ ..+++..++.+++.+++.+.|.+++ +.+...+.++...|..++... .+
T Consensus 222 ~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~----~~ 291 (373)
T 3frk_A 222 HIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYAKHVWYTFVIRS----EK 291 (373)
T ss_dssp CCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTEECCCSSEEEEE----SS
T ss_pred cccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCCceeeEEEEEEe----CC
Confidence 1112333333322222 3356677788888889999998875 653322332322222121110 13
Q ss_pred hHHHHHHHHhhcCeeEEeCCCCCC-----------------------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 365 DMEFALQLAKEESVIVLPGMAVGM-----------------------KNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 365 ~~~~~~~ll~~~gv~v~~g~~~~~-----------------------~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
..++... |.++||.+.++..... ...+|++++ ++++|++++++.|+++..++.
T Consensus 292 ~~~l~~~-L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~di~~~~~~l~~~~~~~~ 369 (373)
T 3frk_A 292 RDELQKY-LNNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEEIEYVIDKINAWKLEHH 369 (373)
T ss_dssp HHHHHHH-HHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHTCC----
T ss_pred HHHHHHH-HHHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHHHHHHHHHHHHHhhhhc
Confidence 4555555 4667999987652100 157999997 899999999999998876653
No 182
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.97 E-value=2.1e-28 Score=232.71 Aligned_cols=322 Identities=14% Similarity=0.144 Sum_probs=222.2
Q ss_pred CCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCC-CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 43 PRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYS-PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 43 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~-~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
-.++++++.|.|. .++.+.+++.+.+... .|. +..+..++|+.++++++. +++++++||++|
T Consensus 21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~~--------~~~i~~~~gt~a 83 (391)
T 3dr4_A 21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCGV--------KHAIACNNGTTA 83 (391)
T ss_dssp -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHTC--------SEEEEESSHHHH
T ss_pred cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhCC--------CcEEEeCCHHHH
Confidence 3567889988865 2467888888888763 454 567789999999999842 378899999999
Q ss_pred HHHHHHHh-cCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccC
Q 014631 122 IQVILTVL-ARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFT 200 (421)
Q Consensus 122 l~~~~~~l-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~ 200 (421)
+..++.++ .++||+|+++.|+|+++...+...|++++.+++++ +++.+|++++++.+++++++++ |+||||...
T Consensus 84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~- 158 (391)
T 3dr4_A 84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQIC- 158 (391)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCC-
T ss_pred HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChh-
Confidence 99999999 89999999999999999999999999999998864 3467999999999988787766 678999984
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccc--cccCCCCceEEEEEeeCCCcchhH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMS--KRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
++++|.++|+++|+++|+|++|+.+. +.+. ....+. + +.+.||| |++ +|.+.|++++++
T Consensus 159 --~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~---~~~~~~--d--i~~~S~s~~K~l--~~g~gg~~~~~~------- 220 (391)
T 3dr4_A 159 --DMDPILEVARRHNLLVIEDAAEAVGATYRGK---KSGSLG--D--CATFSFFGNAII--TTGEGGMITTND------- 220 (391)
T ss_dssp --CHHHHHHHHHHTTCEEEEECTTCTTCEETTE---ETTSSS--S--EEEEECBTTSSS--CCBSCEEEEESC-------
T ss_pred --hHHHHHHHHHHcCCEEEEECcccccceECCe---eecccC--C--EEEEECCCCCcC--CcCCeEEEEECC-------
Confidence 58889999999999999999998633 2221 111111 1 6667766 764 446688988864
Q ss_pred HHHHHHHhhhcccc---------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 278 LRIVDSIKGYLNIS---------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 278 ~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
+++.+.+....... ...+.+...+ .... ...+++..++.+++.+++.+.|.++ ++.+..
T Consensus 221 ~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~--~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~ 294 (391)
T 3dr4_A 221 DDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAI--GLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTK 294 (391)
T ss_dssp HHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHH--HHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEEC
T ss_pred HHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHH--HHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccC
Confidence 33555554332110 1222222222 2221 2345667778888889999999987 776332
Q ss_pred C--CC---ce-eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC---C-----------------CCCeEEEEe
Q 014631 343 K--PE---GS-MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV---G-----------------MKNWLRITF 396 (421)
Q Consensus 343 ~--~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~-----------------~~~~iRi~~ 396 (421)
. +. .+ ..+++.++... ..+..++...| .++||.+.+|... . ....+|+++
T Consensus 295 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~ 370 (391)
T 3dr4_A 295 PHVALTGRHVFWMYTVRLGEGL---STTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPT 370 (391)
T ss_dssp CCCCTTSCCCCSSEEEEECSSC---SSCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECC
T ss_pred cCCCCCCcceeEEEEEEECCcc---chhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccC
Confidence 2 11 12 23456665310 11355666655 6679999988521 0 035789988
Q ss_pred c--CCHHHHHHHHHHHHHHH
Q 014631 397 A--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 397 ~--~~~e~l~~~~~~l~~~~ 414 (421)
+ +++||++++++.|++++
T Consensus 371 ~~~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 371 HAGLTEADIDRVIAALDQVL 390 (391)
T ss_dssp CTTCCHHHHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHHHHHHHHh
Confidence 7 79999999999998754
No 183
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.97 E-value=2e-28 Score=233.47 Aligned_cols=326 Identities=12% Similarity=0.045 Sum_probs=214.1
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC-CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE-cCCHHHH
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA-EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL-TAGCKQA 121 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~-~~g~~~a 121 (421)
+.+++|+.|. .++++.+.+++.+..... ....+.+. ..++.+.+.+.+.+.+|.+ ++++|++ |+|++++
T Consensus 39 ~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~a 109 (398)
T 2fyf_A 39 PRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQAP--VKNLVGRVRSGLAELFSLP-DGYEVILGNGGATAF 109 (398)
T ss_dssp CSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSHH--HHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHHH
T ss_pred cCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCHH--HHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhHH
Confidence 4566776553 257788888887631110 00122111 1233344444444444533 3568998 9999999
Q ss_pred HHHHHHHhcCCCCeEEEcCCCCcc-hHHHHhhc--CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccc
Q 014631 122 IQVILTVLARPGANILLPKPGFPL-YEANARHT--RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 122 l~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~ 198 (421)
++.++.+++++| .+.+..+.|.. ....+... |.+++.++.+ +++..+. .+++++++|++++|+||||.+
T Consensus 110 l~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~~ 181 (398)
T 2fyf_A 110 WDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGVA 181 (398)
T ss_dssp HHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTEE
T ss_pred HHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCccee
Confidence 999999998887 22333333321 12234555 7888888875 2322332 246678999999999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
++.+++.++ +|+++|+|++|+.+.. ...+.. ..+++.|+||+++++| ++||++++ +
T Consensus 182 ~~~~~i~~~------~~~~vivD~a~~~~~~----~~~~~~-----~di~~~s~sK~~~~~g-g~g~l~~~--------~ 237 (398)
T 2fyf_A 182 VAVRRPEGS------DDALVVIDATSGAGGL----PVDIAE-----TDAYYFAPQKNFASDG-GLWLAIMS--------P 237 (398)
T ss_dssp CCCCCCTTC------C-CEEEEECTTTTTTS----CCCGGG-----CSEEEECTTSTTCSCS-SEEEEEEC--------H
T ss_pred cchHHhhhh------cCCeEEEEeccccCCc----ccCccc-----CcEEEEecCcccCCCC-ceEEEEEC--------H
Confidence 987776665 8999999999987432 112221 2377889999998875 59999985 2
Q ss_pred HHHHHHhhh----------------------cccccCCchHHHHHHHHHhhccchhH-HHHHHHHHHHHHHHHHHHhhcC
Q 014631 279 RIVDSIKGY----------------------LNISSGPATFVQGAVPQIFKNTKEDF-FSKIVDILRDTADICYDRIKEI 335 (421)
Q Consensus 279 ~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 335 (421)
++++.+... .....+++...+.++.++++...+.. +++..++++++++++.+.|+++
T Consensus 238 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~ 317 (398)
T 2fyf_A 238 AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQER 317 (398)
T ss_dssp HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHc
Confidence 454544211 11224567777777777776422232 7888999999999999999988
Q ss_pred CCccccC-CC--CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHH
Q 014631 336 PCITCPR-KP--EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 336 ~g~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
|++.+.. .| ..++++|+.++.. .+..++...|. ++||.+.+|......+++|++++ ++++++++++++|
T Consensus 318 ~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~-~~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~l 391 (398)
T 2fyf_A 318 PYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILR-ANGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTECV 391 (398)
T ss_dssp TTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHH-HTTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHHH
T ss_pred CCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHH-HCCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHHH
Confidence 8887331 24 2344888888532 14667777664 55999998743323578999998 6899999999999
Q ss_pred HHHHHH
Q 014631 411 KAFCQR 416 (421)
Q Consensus 411 ~~~~~~ 416 (421)
++++++
T Consensus 392 ~~~l~~ 397 (398)
T 2fyf_A 392 DWVVER 397 (398)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 998764
No 184
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=1.7e-27 Score=226.85 Aligned_cols=283 Identities=19% Similarity=0.169 Sum_probs=200.0
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEe
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRH 159 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~ 159 (421)
+.....++++.++++++ . + +.+++++|++|++.++.++.++||+|+++.|+|+++...+ ...|.++..
T Consensus 63 ~~~~~~~l~~~la~~~g------~-~-~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 134 (398)
T 1gc0_A 63 SNPTLNLLEARMASLEG------G-E-AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRH 134 (398)
T ss_dssp CCHHHHHHHHHHHHHHT------C-S-EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEE
T ss_pred CChHHHHHHHHHHHHhC------C-C-cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEE
Confidence 34456788999999873 2 2 5556666689999999999999999999999999887665 667888888
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
++. .|++++++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.+.. ++ .
T Consensus 135 ~~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~ 199 (398)
T 1gc0_A 135 VDM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-E 199 (398)
T ss_dssp ECT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-G
T ss_pred ECC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-h
Confidence 764 2889999999888999999999999999975 8999999999999999999998765421 22 1
Q ss_pred cCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHH-HHhhhccc--ccCCchHHHHHHHHHhhccchhHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVD-SIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
.+ ..+++.|+||.++++|.|+ ||+++++ ++++ .+...... ..+.+++.+.++...++. +.
T Consensus 200 ~~---~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~ 263 (398)
T 1gc0_A 200 LG---ADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LN 263 (398)
T ss_dssp GT---CSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HH
T ss_pred hC---ceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HH
Confidence 22 3488899999999999998 9988852 3333 44443322 345677777777666653 34
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccc-------------cCCC---CceeEEEEecCcccccCCCChHHHHHHHHhhcCee
Q 014631 316 KIVDILRDTADICYDRIKEIPCITC-------------PRKP---EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI 379 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g~~~-------------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 379 (421)
.+.++..++.+.+.+.|.+++++.. +..+ ..+.++.+.++. ..+.+..++.+.++.
T Consensus 264 ~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~ 335 (398)
T 1gc0_A 264 LRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLF 335 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCc
Confidence 4555666677777777766543321 1111 234455556642 334456677888888
Q ss_pred EEe---CCC------C----------------CC-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 380 VLP---GMA------V----------------GM-KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 380 v~~---g~~------~----------------~~-~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
+.. |.. + +. ++.+|+|++ +++++++.+.+.|+++
T Consensus 336 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 336 SRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp EECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 765 321 0 11 478999998 5667888777777654
No 185
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.96 E-value=1.3e-27 Score=233.77 Aligned_cols=367 Identities=13% Similarity=0.090 Sum_probs=249.3
Q ss_pred HHHHHHHHHHhccccCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCC
Q 014631 27 VRSALTIIKQNLKENDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCK 106 (421)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~ 106 (421)
...+...++..+.. .+.+.+++..-.+ .++++.+.+++.+.+... ..+|....+..++++.+.+++.+.+|.+
T Consensus 39 ~~~~~~~~~~~i~l-~gnp~~~l~s~~t-----~~~~~~v~~~l~~~~~~~-~~~~~~~p~~~~le~~~~~~la~l~g~~ 111 (502)
T 3hbx_A 39 KEAAYQIINDELML-DGNPRLNLASFVT-----TWMEPECDKLIMSSINKN-YVDMDEYPVTTELQNRCVNMIAHLFNAP 111 (502)
T ss_dssp HHHHHHHHHHHGGG-SCCGGGBTTCCSC-----CCCCHHHHHHHHHTTTCB-TTCTTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHhcc-CCCCCceeccccC-----CCCCHHHHHHHHHHhccC-CCChhcChhHHHHHHHHHHHHHHHhCCC
Confidence 44455555544422 2444445443211 245788889988887653 2234444456789999999999988866
Q ss_pred CCCCcEE---EcCCHHHHHHHHHHHhcCC--------CC-----eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccC
Q 014631 107 LSPDDVY---LTAGCKQAIQVILTVLARP--------GA-----NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEV 170 (421)
Q Consensus 107 ~~~~~i~---~~~g~~~al~~~~~~l~~~--------gd-----~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 170 (421)
.++++++ +|+|+++++.+++.++..+ |+ .|+++.++|.++...++..|++++.+++++ +++.+
T Consensus 112 ~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~~ 190 (502)
T 3hbx_A 112 LEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYVM 190 (502)
T ss_dssp CCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCSC
T ss_pred cccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCcC
Confidence 4455544 5899999999988877554 76 999999999999999999999999999754 34779
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc------CcEEEEccccccccc---CCCCcccccccC
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL------GIMVISDEVYDHLTF---GSTPYVRMGVFG 241 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~ 241 (421)
|++++++.+++++++|++++|+||||.+ .++++|.++|+++ |+++++|++|+++.. .+.....+.
T Consensus 191 d~~~l~~~i~~~t~~v~~~~~~n~tG~~---~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~--- 264 (502)
T 3hbx_A 191 DPQQAVDMVDENTICVAAILGSTLNGEF---EDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR--- 264 (502)
T ss_dssp CHHHHHHHCCTTEEEEEEEBSCTTTCCB---CCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT---
T ss_pred CHHHHHHHHhhCCEEEEEecCCCCCCcc---cCHHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC---
Confidence 9999999999999999999999999999 4588888889998 999999999987541 222211111
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc----------cccCCchHHHHHHHHHhhccch
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN----------ISSGPATFVQGAVPQIFKNTKE 311 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~l~~~~~ 311 (421)
...-.++..|.+|+ +.++.++|++++.++..+ .+.+..... ..++.+.....+...++.....
T Consensus 265 ~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l------~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg~ 337 (502)
T 3hbx_A 265 LPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDL------PEELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLGH 337 (502)
T ss_dssp STTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHHH
T ss_pred CCCceEEEECcccc-cCCCCCeEEEEEeCHHHh------hHHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHHH
Confidence 11123556788998 566778999988653211 111110000 0012222222333333432234
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC---
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCPRKP-EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG--- 387 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--- 387 (421)
..+.++.++..++++++.+.|++++++.++ .+ ....++.+.++... ..+..++...| .++|+.+.....+.
T Consensus 338 ~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~Gi~v~~~~~p~~~~ 412 (502)
T 3hbx_A 338 EGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS---CHTEFEISDML-RRYGWIVPAYTMPPNAQ 412 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS---SCCHHHHHHHH-HTTTCBCCEEECCTTCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC---cCCHHHHHHHH-HhCCcEEeeccCCcccC
Confidence 567888889999999999999999778844 44 34556667775321 01344666655 67799875433222
Q ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
....+|++++ ++.++++.+++.|+++++++++
T Consensus 413 ~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 413 HITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2357999998 7899999999999999987754
No 186
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=6.4e-28 Score=231.58 Aligned_cols=329 Identities=13% Similarity=0.042 Sum_probs=210.9
Q ss_pred CcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCe
Q 014631 62 TTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGAN 135 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~ 135 (421)
.++.+.+++.+++.+..... |........+++...+++.+.+| .++++|++++| ++++..++.+++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence 58999999998885422112 22223334555544444544444 45666656555 78999999999999999
Q ss_pred EEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014631 136 ILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211 (421)
Q Consensus 136 Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~ 211 (421)
|+++.|+|.++. ......|..+..+++..+.++.+|++++++.+++ +++++++++|+||+ .. ++++|.++|
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~---~l~~l~~l~ 193 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VV---DWAKMREIA 193 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEECTTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CC---CHHHHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCCccCCcCHHHHHHHHHhcCCeEEEEecCccCC--cc---CHHHHHHHH
Confidence 999999998743 2222334433433333334567899999998876 58888888999874 43 388999999
Q ss_pred HhcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc
Q 014631 212 RKLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI 290 (421)
Q Consensus 212 ~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (421)
++||+++|+||+|+... +.+.....+.. ..++++|+||+++ |.+.||+++++.- .++.+.+......
T Consensus 194 ~~~~~~li~De~~~~~~~~~~~~~~~~~~-----~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~~~ 261 (420)
T 3gbx_A 194 DSIGAYLFVDMAHVAGLIAAGVYPNPVPH-----AHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAVFP 261 (420)
T ss_dssp HHTTCEEEEECTTTHHHHHTTSSCCSTTT-----SSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHHC-
T ss_pred HHcCCEEEEECCcchhceecccCCccccc-----CCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhcCC
Confidence 99999999999986433 33322222211 2388999999974 4556999986311 1355555544322
Q ss_pred --ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHH
Q 014631 291 --SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEF 368 (421)
Q Consensus 291 --~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (421)
.++++...+.++..++......++++..++++++++++.+.|.+. |+.++..+..++++|+.++... .+.+.
T Consensus 262 ~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 335 (420)
T 3gbx_A 262 SAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN-----LTGKE 335 (420)
T ss_dssp ---CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT-----CCHHH
T ss_pred CCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC-----CCHHH
Confidence 224445555555545543334667888899999999999999885 7774423356778888876421 13344
Q ss_pred HHHHHhhcCeeEEe-------CCCCCCCCeEEEEec------CCHHHHHHHHHHHHHHHHHh
Q 014631 369 ALQLAKEESVIVLP-------GMAVGMKNWLRITFA------IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 369 ~~~ll~~~gv~v~~-------g~~~~~~~~iRi~~~------~~~e~l~~~~~~l~~~~~~~ 417 (421)
+..+++++||.+.+ |..|+ ...+|++++ .++++++++++.|++++++.
T Consensus 336 ~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 336 ADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp HHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 55566888999998 33333 356999986 24799999999999988653
No 187
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=2.7e-28 Score=229.99 Aligned_cols=305 Identities=16% Similarity=0.182 Sum_probs=219.0
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEEc
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILLP 139 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~~ 139 (421)
+.++.+.+++.+.+... .|.+..+..++|+.++++++ .+++++++||++|+..++.++ .++||+|+++
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~ 81 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFVG--------AKYCISCANGTDALQIVQMALGVGPGDEVITP 81 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence 35678888888888763 45566678899999999984 238999999999999999999 8999999999
Q ss_pred CCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 140 KPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 140 ~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.++|.++...+...|++++.++++++ .+.+|++++++.+++++++|+ |+||||.. .++++|.++|+++|+++|
T Consensus 82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~---~~~~~i~~la~~~~~~li 154 (367)
T 3nyt_A 82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQC---ADFDAINAIASKYGIPVI 154 (367)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCC---CCHHHHHHHHHHTTCCBE
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccCh---hhHHHHHHHHHHcCCEEE
Confidence 99999999999999999999988653 367999999999988887766 88899977 558889999999999999
Q ss_pred Ecccccccc-cCCCCcccccccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-------
Q 014631 220 SDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN------- 289 (421)
Q Consensus 220 ~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~------- 289 (421)
+|++|+.+. +.+.. +..++ .+++.|| +|.++.+|. .|+++.++ +++.+.+.....
T Consensus 155 ~D~a~~~g~~~~~~~---~~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~-------~~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 155 EDAAQSFGASYKGKR---SCNLS----TVACTSFFPSAPLGCYGD-GGAIFTND-------DELATAIRQIARHGQDRRY 219 (367)
T ss_dssp EECTTTTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSSC-CEEEEESC-------HHHHHHHHHHTBTTEEETT
T ss_pred EECccccCCeECCee---ccCCC----CEEEEECCCCCcCCCcCc-eeEEEeCC-------HHHHHHHHHHHhcCCCcCc
Confidence 999998633 33221 11222 2777787 799876576 78888754 346665554322
Q ss_pred ------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----eEEEEecCcccc
Q 014631 290 ------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS----MFVMVKLNLSLL 359 (421)
Q Consensus 290 ------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~----~~~~~~~~~~~~ 359 (421)
.....+.+...++...++. +++..++.+++.+++.+.|+++ ++.....+.++ ..+.+.++
T Consensus 220 ~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 289 (367)
T 3nyt_A 220 HHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD---- 289 (367)
T ss_dssp EECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----
T ss_pred eeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----
Confidence 1223455555555444532 4556667777888888888877 45422222222 12333332
Q ss_pred cCCCChHHHHHHHHhhcCeeEEeCCC--------CC-C-----------CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 360 EGISDDMEFALQLAKEESVIVLPGMA--------VG-M-----------KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 360 ~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~-~-----------~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
+...+... |+++||.+.++.. |. . ...+|+++. .+++|++++++.|++.
T Consensus 290 ----~~~~l~~~-L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 ----NRESVQAS-LKAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp ----SHHHHHHH-HHHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ----CHHHHHHH-HHHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 34455554 5677999987653 11 0 246899887 7899999999998765
No 188
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=5.3e-27 Score=222.65 Aligned_cols=283 Identities=17% Similarity=0.192 Sum_probs=198.7
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEe
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRH 159 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~ 159 (421)
+..+..+++++++++++ .+ +.+++++| ++++..+++++.++||+|+++.|+|++.... +...|.+++.
T Consensus 50 ~~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~ 121 (386)
T 1cs1_A 50 GNPTRDVVQRALAELEG------GA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLF 121 (386)
T ss_dssp CCHHHHHHHHHHHHHHT------CS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEE
T ss_pred CCccHHHHHHHHHHHhC------CC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEE
Confidence 34456899999999984 22 56666555 9999999999999999999999999975443 4667888888
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
++.+ |++++++.++++++++++++|+||||.+++ +++|.++|+++|+++|+||+|+.+.+. .++ .
T Consensus 122 ~~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~----~~~-~ 186 (386)
T 1cs1_A 122 VDQG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQ----NPL-A 186 (386)
T ss_dssp ECTT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CGG-G
T ss_pred eCCC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-c
Confidence 7642 889999998888999999999999999975 889999999999999999999986542 122 2
Q ss_pred cCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
+ +..+++.|+||+++.+|.|+ ||+++++ +++.+.+...... ..+.+++.+.++...++. +...
T Consensus 187 ~---~~di~~~s~sK~~~~~~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~ 251 (386)
T 1cs1_A 187 L---GADLVLHSCTKYLNGHSDVVAGVVIAKD-------PDVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPR 251 (386)
T ss_dssp G---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHH
T ss_pred c---CceEEEEcCcccccCCCCceeEEEEeCc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHH
Confidence 2 24588999999999999887 9999863 2466666554432 345677777766565542 4455
Q ss_pred HHHHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE
Q 014631 318 VDILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL 381 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 381 (421)
.+...++++.+.+.|++++.+.....+ ..+.++.+.++. ...+ +...+.++||.+.
T Consensus 252 ~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~-~~~~l~~~gi~~~ 323 (386)
T 1cs1_A 252 MELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQT-LRRFLGGLSLFTL 323 (386)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHHH-HHHHHHTCSSSEE
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHHH-HHHHHHhCCcceE
Confidence 666777788888888776443211011 124455556642 2233 4455678899887
Q ss_pred eCCCC-------------------------C-CCCeEEEEecC--CHHHHHHHHHHHHH
Q 014631 382 PGMAV-------------------------G-MKNWLRITFAI--EPSALEEGLGRIKA 412 (421)
Q Consensus 382 ~g~~~-------------------------~-~~~~iRi~~~~--~~e~l~~~~~~l~~ 412 (421)
+.+.- + .++++|++++. ++++++.+.+.|++
T Consensus 324 ~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~ 382 (386)
T 1cs1_A 324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRA 382 (386)
T ss_dssp BSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred cccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHH
Confidence 42110 1 14789999984 34455555444443
No 189
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=2.9e-27 Score=219.68 Aligned_cols=277 Identities=14% Similarity=0.094 Sum_probs=194.4
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCC
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPE 165 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~ 165 (421)
++++.++++++ .+ +.++ +++|++++..++.++.++||+|+++.|+|+++...+ ...|.+++.++.
T Consensus 2 ~l~~~la~~~g------~~-~~i~-~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLEH------AE-ACAA-TASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHHT------CS-EEEE-ESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHhC------CC-eEEE-eCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 68999999984 33 4454 455589999999998899999999999999886665 457888888764
Q ss_pred CCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh-cCcEEEEcccccccccCCCCcccccccCCCC
Q 014631 166 KGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK-LGIMVISDEVYDHLTFGSTPYVRMGVFGSTV 244 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 244 (421)
.|++++++.++++++++++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .++ .+ +
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~~---~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-DL---G 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-GG---T
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-hc---C
Confidence 3788999999888999999999999999985 8899999999 99999999999875432 122 22 3
Q ss_pred CEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 245 PVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 245 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
..+++.|+||+|+++|.| +||+++++ +++.+.+...... ..+.+++.+.++...++. ...+.+..
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 458899999999999999 79999852 2577777766543 346777777766555542 22223333
Q ss_pred HHHHHHHHHHhhcC--------------CCccccC--CCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCC
Q 014631 322 RDTADICYDRIKEI--------------PCITCPR--KPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMA 385 (421)
Q Consensus 322 ~~~~~~~~~~l~~~--------------~g~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 385 (421)
.++.+.+.+.+++. |++.+.. ....+.++.+.++ +..+ +..++.++||.+.+.+.
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~-~~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEK-AKKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHH-HHHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHH-HHHHHHhCCCceeccCC
Confidence 34444444444322 2322110 0112445666664 2333 44566788998866521
Q ss_pred -------------------------CCC-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 386 -------------------------VGM-KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 386 -------------------------~~~-~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
++. ++.+|++++ +++++++.+++.|+++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 112 479999998 6678888888887653
No 190
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.96 E-value=1.5e-27 Score=227.34 Aligned_cols=285 Identities=15% Similarity=0.119 Sum_probs=199.0
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~ 163 (421)
..+|++.++++. | .+++++++||++|+..++.+++++||+|++++|+|+++...+.. .|.+++.++.+
T Consensus 83 ~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~ 154 (414)
T 3ndn_A 83 VSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGD 154 (414)
T ss_dssp HHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT
T ss_pred HHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCC
Confidence 456666666665 2 35789999999999999999999999999999999998766644 89999888753
Q ss_pred CCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 164 PEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 164 ~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
|++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+..... .++ ..+
T Consensus 155 -------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g-- 217 (414)
T 3ndn_A 155 -------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG-- 217 (414)
T ss_dssp -------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT--
T ss_pred -------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC--
Confidence 889999999989999999999999999955 889999999999999999999853321 122 222
Q ss_pred CCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHH-HHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHHH
Q 014631 244 VPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVD-SIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVDI 320 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 320 (421)
..+++.|+||.++.+| +++|++++++ +.+. .+..... ...+.++....++...++ .+..+.++
T Consensus 218 -~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~~ 283 (414)
T 3ndn_A 218 -VDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-----TLAIRVQH 283 (414)
T ss_dssp -CSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-----GHHHHHHH
T ss_pred -CCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-----HHHHHHHH
Confidence 2378899999998878 8999999863 2332 3443222 223445554444433333 35566677
Q ss_pred HHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC
Q 014631 321 LRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM 384 (421)
Q Consensus 321 ~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~ 384 (421)
..++++.+.+.|++.|++..+..|. .|.+++++++............++.. ++..++.+..|.
T Consensus 284 ~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~-l~~~~~~~s~G~ 362 (414)
T 3ndn_A 284 SNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDK-MRLIDISNNLGD 362 (414)
T ss_dssp HHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHH-CSSSEECSCCSC
T ss_pred HHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHh-CccceEcCCCCC
Confidence 7888889999999887764333332 46688888863100000013445544 455677777776
Q ss_pred CCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 385 AVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 385 ~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
.+. .++.+|+|++. |+.+.+++.|.+++
T Consensus 363 ~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 363 AKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp SSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 431 14689999984 34455556665554
No 191
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=8.4e-27 Score=228.81 Aligned_cols=330 Identities=10% Similarity=0.026 Sum_probs=226.0
Q ss_pred HHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC--------CC-----C
Q 014631 68 DAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR--------PG-----A 134 (421)
Q Consensus 68 ~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~--------~g-----d 134 (421)
+.+...++. +...|....+..++++.+.+++.+.+|.+.+++++++|+|+++|+..++.++.. +| +
T Consensus 111 ~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~ 189 (504)
T 2okj_A 111 EWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPK 189 (504)
T ss_dssp HHHHHHHCC-BSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCC
T ss_pred HHHHHhhcc-CCCchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCC
Confidence 444444433 334566555567889999888888877554478999999999999999888742 56 6
Q ss_pred -eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccccCHHHH
Q 014631 135 -NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNVFTYQQL 204 (421)
Q Consensus 135 -~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l 204 (421)
.|+++.++|+++...+...|. +++.+|.+ .++.+|+++|++.+.+ ++++|++++|+||||.+ +++
T Consensus 190 ~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i---~~l 264 (504)
T 2okj_A 190 LVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF---DPI 264 (504)
T ss_dssp EEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCB---CCH
T ss_pred eEEEECCcchHHHHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCc---CCH
Confidence 789999999999999988877 78888864 3577999999998865 47888999999999999 558
Q ss_pred HHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHH
Q 014631 205 QKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDS 283 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 283 (421)
++|+++|++||+++++|++|+.+.+..... ..+..+. ...+++.|+||+++.| .++|+++++++. +.+.
T Consensus 265 ~~I~~la~~~g~~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~ 334 (504)
T 2okj_A 265 QEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQG 334 (504)
T ss_dssp HHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHH
T ss_pred HHHHHHHHHcCCEEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECHH-------HHHH
Confidence 899999999999999999999876532221 1222221 1126677899997655 689999997532 3232
Q ss_pred -Hhhhcccc-c--------------------CCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 284 -IKGYLNIS-S--------------------GPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 284 -~~~~~~~~-~--------------------~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
+....... . ....+.+.++..++. ..++.++.++..++++++.+.|+++|++.++
T Consensus 335 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~ 411 (504)
T 2okj_A 335 CNQMCAGYLFQPDKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMV 411 (504)
T ss_dssp HHCCCCSSSCCSCCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEES
T ss_pred HhcCCCccccCCcccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 11111000 0 012444555544443 4668888899999999999999998898854
Q ss_pred C--CCCceeEEEEecCccccc--CC--------CChHHHHHHHHhhcCeeEEeCCCCCC-CCeEEEEec---CCHHHHHH
Q 014631 342 R--KPEGSMFVMVKLNLSLLE--GI--------SDDMEFALQLAKEESVIVLPGMAVGM-KNWLRITFA---IEPSALEE 405 (421)
Q Consensus 342 ~--~~~~~~~~~~~~~~~~~~--~~--------~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~iRi~~~---~~~e~l~~ 405 (421)
. .|..+++.+...+..... .. .....+...+ .+.|+.+..+..+.. .+++|++++ ++++++++
T Consensus 412 ~~~~p~~~~v~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~ 490 (504)
T 2okj_A 412 FNGEPEHTNVCFWYIPQSLRGVPDSPQRREKLHKVAPKIKALM-MESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDF 490 (504)
T ss_dssp SSSCCSSSCEEEEECCGGGSSCCCCHHHHHHHTTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHH
T ss_pred ecCCCCeEEEEEEEeCccccccccchhhHHHHHHHHHHHHHHH-HhCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHH
Confidence 3 366666554433321000 00 0023455555 455754433222322 358999996 68999999
Q ss_pred HHHHHHHHHHHh
Q 014631 406 GLGRIKAFCQRH 417 (421)
Q Consensus 406 ~~~~l~~~~~~~ 417 (421)
++++|+++++++
T Consensus 491 ~~~~l~~~~~~~ 502 (504)
T 2okj_A 491 LIEEIERLGQDL 502 (504)
T ss_dssp HHHHHHHHHTC-
T ss_pred HHHHHHHHHHHH
Confidence 999999987654
No 192
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=1.6e-26 Score=221.13 Aligned_cols=308 Identities=16% Similarity=0.136 Sum_probs=212.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCC--CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPS--VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~--~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl 137 (421)
++.++.+.+++. .. ..+.|+.. ....++++.++++++ .+++++++|+++|++.++.++.++||+|+
T Consensus 32 ~~~~~~~~~~~~---~~-~~~~y~~~~~~~~~~l~~~la~~~g--------~~~~~~~~~gt~a~~~al~~l~~~gd~vi 99 (412)
T 2cb1_A 32 FKTLEEGQERFA---TG-EGYVYARQKDPTAKALEERLKALEG--------ALEAVVLASGQAATFAALLALLRPGDEVV 99 (412)
T ss_dssp CSSHHHHHHHHH---HC-CSCSBTTTCCHHHHHHHHHHHHHHT--------CSEEEEESSHHHHHHHHHHTTCCTTCEEE
T ss_pred cCChHHHHHHhc---cc-cCcCcCCCCChHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 566666666553 22 22456533 446789999999883 24899999999999999999999999999
Q ss_pred EcCCCCcchHHH----HhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 138 LPKPGFPLYEAN----ARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 138 ~~~p~y~~~~~~----~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
++.|+|.++... +...|.+++.++. |++++++.+++++++|++++|+||||.+++ +++|.++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~~ 168 (412)
T 2cb1_A 100 AAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAEE 168 (412)
T ss_dssp EETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHH
T ss_pred EeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHHH
Confidence 999999876554 3457888888763 488999999888999999999999999975 8999999999
Q ss_pred cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcc------hh-----------
Q 014631 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGI------LQ----------- 276 (421)
Q Consensus 214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~~----------- 276 (421)
||+++|+|++|+.+.+... +. .. +..+++.|+||+++.+|.|+|++++.++... ..
T Consensus 169 ~~~~li~D~~~~~~~~~~~---~~-~~---~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 169 AGVALVVDNTFGAAGALCR---PL-AW---GAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HTCEEEEECGGGTTTTSCC---GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred cCCEEEEECCCccccccCC---cc-cc---CCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 9999999999987522111 11 12 2348899999999999999999988653210 00
Q ss_pred ---HHHHHHHHhhhc-ccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC------
Q 014631 277 ---ELRIVDSIKGYL-NIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE------ 345 (421)
Q Consensus 277 ---~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~------ 345 (421)
..++.+.++... ... ...++.....+...++. +..+.++..++.+++.+.|.+.+++..+..|.
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~ 316 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPA 316 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTT
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcc
Confidence 002334443332 111 12344444443333432 34555666788889999999888876332231
Q ss_pred ----------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCC---------CCC----------------C-C
Q 014631 346 ----------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGM---------AVG----------------M-K 389 (421)
Q Consensus 346 ----------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~---------~~~----------------~-~ 389 (421)
.+.++.+.+ . +... +..++.+.||.+ .++ .+. . +
T Consensus 317 ~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~ 386 (412)
T 2cb1_A 317 HRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTP 386 (412)
T ss_dssp HHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCT
T ss_pred HHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCC
Confidence 234555556 2 2333 445667789998 774 221 0 4
Q ss_pred CeEEEEec--CCHHHHHHHHHHHHH
Q 014631 390 NWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 390 ~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
+.+|+|++ +++++++.+.++|++
T Consensus 387 ~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 387 GLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CeEEEEeccCCHHHHHHHHHHHHhh
Confidence 78999998 667888888887754
No 193
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.96 E-value=4e-28 Score=229.68 Aligned_cols=299 Identities=12% Similarity=0.136 Sum_probs=210.8
Q ss_pred HHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH--HHHhhcC--ceeEeeeccCC
Q 014631 90 PARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE--ANARHTR--LEIRHFDLLPE 165 (421)
Q Consensus 90 ~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~--~~~~~~g--~~~~~~~~~~~ 165 (421)
++.+.+++.+.+.+| .+ +.+++|+|+|++++.++..+ ++||+|++.+++|+++. ..+...| .+++.++.+..
T Consensus 35 ~~~~~~~~~l~~~~~--~~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYN--AE-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHT--CS-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHhC--CC-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence 344444444444444 33 68899999999999998665 69999999999998753 3445555 36677765431
Q ss_pred ------CC-ccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccc
Q 014631 166 ------KG-WEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRM 237 (421)
Q Consensus 166 ------~~-~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 237 (421)
.. ..+|++++++.+. ++++++++++++|+||.+++.+++++|.++|++||+++|+|++++ . +. ...+
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~~-~~~~ 185 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---CV-WLDM 185 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---TC-CCCH
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---Cc-cccc
Confidence 11 1479999999885 478899999999999999999999999999999999999999986 2 22 2233
Q ss_pred cccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc----------------------c-cccCC
Q 014631 238 GVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL----------------------N-ISSGP 294 (421)
Q Consensus 238 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~~~~~ 294 (421)
..++.+ +++.|++|+++.+ .++|+++++ +++.+.+.... . ..+++
T Consensus 186 ~~~~~d---~~~~s~~K~l~~~-~g~g~~~~~--------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~ 253 (379)
T 3ke3_A 186 KELGID---VLISAPQKGWSST-PCAGLVMLS--------AAAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM 253 (379)
T ss_dssp HHHTCS---EEEECTTTTTCSC-CCEEEEEEC--------HHHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred cccCCC---EEEecchhhcCCC-CceEEEEEC--------HHHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence 333332 7788999986543 358999985 24444443211 0 12367
Q ss_pred chHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCc--ee-EEEEecCcccccCCCChHHHHHH
Q 014631 295 ATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEG--SM-FVMVKLNLSLLEGISDDMEFALQ 371 (421)
Q Consensus 295 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~~~~ 371 (421)
+...+.++.++++...+..++++.++++++++++++.|+++ |+.+. .+.. +. ...+..+. ....+ ..
T Consensus 254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~-~~~~~~~~~i~~~~~~~-------~~~~~-~~ 323 (379)
T 3ke3_A 254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESV-AAEGFEAPGVVVSYTER-------DDMHK-GS 323 (379)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-BCTTCBCSSEEEEECSC-------HHHHS-SH
T ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEec-CCccccCceEEEEccCC-------cchHH-HH
Confidence 77788888788765444557888899999999999999988 77743 3321 22 22223321 11122 34
Q ss_pred HHhhcCeeEEeCCCCCC-----CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhh
Q 014631 372 LAKEESVIVLPGMAVGM-----KNWLRITFA--IEPSALEEGLGRIKAFCQRHAK 419 (421)
Q Consensus 372 ll~~~gv~v~~g~~~~~-----~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~ 419 (421)
.+.++||.+.+|..+.. .+.+|++++ +++++|++++++|+++++++..
T Consensus 324 ~L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~~ 378 (379)
T 3ke3_A 324 AFAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVLA 378 (379)
T ss_dssp HHHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHHC
T ss_pred HHHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhcc
Confidence 45778999999986542 578999997 7899999999999999988753
No 194
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=7.2e-29 Score=241.56 Aligned_cols=330 Identities=15% Similarity=0.146 Sum_probs=213.4
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC-----C----C
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP-----G----A 134 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~-----g----d 134 (421)
+.+.+++.+++..+. ..|++..+..+++++++++++ .+++++|+|+++|+..++.++.++ | |
T Consensus 53 ~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d 123 (467)
T 2oqx_A 53 GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSK 123 (467)
T ss_dssp SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTT
T ss_pred HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHHHHHHHHHHHhccccccCCCCccc
Confidence 667788888776532 368777778899999999983 368999999999999999998888 8 9
Q ss_pred eEEEcCCCCcchHHHHhhcCceeEeeec----cCC----CCccCCHHHHHhhhc----cCceEEEEeCCCCCc-ccccCH
Q 014631 135 NILLPKPGFPLYEANARHTRLEIRHFDL----LPE----KGWEVDLDGLEALAD----ENTVAMVIVNPGNPC-GNVFTY 201 (421)
Q Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~----~~~----~~~~~d~e~l~~~~~----~~~~~i~~~~p~npt-G~~~~~ 201 (421)
+|++..+.|.++.......|..+..... +.+ .++.+|+++|++.+. +++++|++++|+||+ |.+++.
T Consensus 124 ~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~ 203 (467)
T 2oqx_A 124 MVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSL 203 (467)
T ss_dssp CEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCH
T ss_pred eEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCH
Confidence 9887743334444455555665443211 111 234689999999886 368899999999998 899999
Q ss_pred HHHHHHHHHHHhcCcEEEEcccccc----------cccCCCCcccccc--cCCCCCEEEEcccccccCCC-CceEEEEEe
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYDH----------LTFGSTPYVRMGV--FGSTVPVITLGSMSKRWIVP-GWRLGWLVT 268 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~~--~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~ 268 (421)
+++++|+++|++||+++|+|+++.. ..+.|.....+.. ....+ +++.|+||+++++ | ||+++
T Consensus 204 ~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~d--~~~~s~sK~~g~~~G---g~~~~ 278 (467)
T 2oqx_A 204 ANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYAD--MLAMSAKKDAMVPMG---GLLCM 278 (467)
T ss_dssp HHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGCS--EEEEESSSTTCCSSC---EEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccCC--eEEEecccccCCCCc---eEEEe
Confidence 9999999999999999999977654 1233332212210 01112 4567999998766 4 77777
Q ss_pred eCCCcchhHHHHHHHHhhhc---c---cccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 269 SDPSGILQELRIVDSIKGYL---N---ISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
++.. +. +....+.... . .....+.....++...+.. ++ ++..++.+++++++.+.|+++ ++. +
T Consensus 279 ~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~----~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~ 348 (467)
T 2oqx_A 279 KDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYD----GMNLDWLAYRIAQVQYLVDGLEEI-GVV-C 348 (467)
T ss_dssp CSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHH----TTCHHHHHHHHHHHHHHHHHHHHT-TCC-E
T ss_pred cChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHh----hhhHHHHHHHHHHHHHHHHHHHHC-CCe-e
Confidence 5320 11 2333333321 1 0111222222222222221 11 123344567788888999887 777 4
Q ss_pred CCCCceeEEEEecCc--ccccCCCC-hHHHHHHHHhhcCeeEEeCCCC--C-----------CCCeEEEEec---CCHHH
Q 014631 342 RKPEGSMFVMVKLNL--SLLEGISD-DMEFALQLAKEESVIVLPGMAV--G-----------MKNWLRITFA---IEPSA 402 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~--~-----------~~~~iRi~~~---~~~e~ 402 (421)
. |.+++++|+.++. .......- ...++..|+.++||.+.|+..| + ..+++|++++ +++++
T Consensus 349 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~~t~e~ 427 (467)
T 2oqx_A 349 Q-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGKQLPCPAELLRLTIPRATYTQTH 427 (467)
T ss_dssp E-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCSBCCCSCCEEEECCCTTTSCHHH
T ss_pred e-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccccccCccCeEEEEecCCCCCHHH
Confidence 4 6778899988742 11100000 2344666657889999985432 1 1378999998 68999
Q ss_pred HHHHHHHHHHHHHHhh
Q 014631 403 LEEGLGRIKAFCQRHA 418 (421)
Q Consensus 403 l~~~~~~l~~~~~~~~ 418 (421)
+++++++|++++++..
T Consensus 428 i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 428 MDFIIEAFKHVKENAA 443 (467)
T ss_dssp HHHHHHHHHHHHHSGG
T ss_pred HHHHHHHHHHHHhhhh
Confidence 9999999999987654
No 195
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.96 E-value=2.5e-27 Score=232.17 Aligned_cols=338 Identities=17% Similarity=0.142 Sum_probs=228.6
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh----c------
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL----A------ 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l----~------ 130 (421)
+.++.+.+++.....+.+...|....+..++++.+.+++.+.+|.+ ..+.+++|+|+++++..++.++ .
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 5677787777665555444456555566789999888888888754 2378999999999999988773 2
Q ss_pred ---CC------CC-eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC----ce--EEEEeCC
Q 014631 131 ---RP------GA-NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN----TV--AMVIVNP 191 (421)
Q Consensus 131 ---~~------gd-~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~----~~--~i~~~~p 191 (421)
++ || .|+++.++|+++...+...|. +++.+|.+ .++.+|+++|++.++++ ++ +++++++
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 799999999999999888876 68888874 35679999999988653 33 7788899
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCC
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDP 271 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 271 (421)
+||||.+ +++++|+++|++||+++++|++|+.+.+.......+..+. ...+++.|+||+++.| .++|+++++++
T Consensus 268 ~~~tG~~---~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~~ 341 (497)
T 2qma_A 268 TTDHGAI---DDLDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVNDK 341 (497)
T ss_dssp CTTTCCB---CCHHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred CCCCCCC---CCHHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeCH
Confidence 9999998 6689999999999999999999998765332111122221 1126677899997665 68999999754
Q ss_pred CcchhHHHHHHHHhhhccc-cc----CCchHH----------HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC
Q 014631 272 SGILQELRIVDSIKGYLNI-SS----GPATFV----------QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP 336 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~-~~----~~~~~~----------~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 336 (421)
.. ++.+.....+ .. .++... ..++..++......++.++.++..++++++.+.|+++|
T Consensus 342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~ 414 (497)
T 2qma_A 342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTND 414 (497)
T ss_dssp GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCT
T ss_pred HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 31 1111110000 00 011110 11122233333356788888999999999999999988
Q ss_pred CccccCCCCceeEEEEecCcccccCCC-ChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEe-c--CCHHHHHHHHHHHHH
Q 014631 337 CITCPRKPEGSMFVMVKLNLSLLEGIS-DDMEFALQLAKEESVIVLPGMAVGMKNWLRITF-A--IEPSALEEGLGRIKA 412 (421)
Q Consensus 337 g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~-~--~~~e~l~~~~~~l~~ 412 (421)
++.++..|..+ ++++++..... ... -..++... +.+.|+.+.++..+....++|+++ + +++++++++++.|++
T Consensus 415 ~~~~~~~~~~~-~v~f~~~~~~~-~~~~l~~~l~~~-l~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l~~ 491 (497)
T 2qma_A 415 QFELLAEPSLS-TVLFRATHETA-DLDELNKALRLE-ALTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKINM 491 (497)
T ss_dssp TEEECSCCSSS-EEEEEECCSSS-CHHHHHHHHHHH-HHHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CeEEEcCCCce-EEEEEEcCCcc-CHHHHHHHHHHH-HHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHH
Confidence 98844445544 56666643110 000 01234444 456699887655454456899998 4 789999999999999
Q ss_pred HHHHh
Q 014631 413 FCQRH 417 (421)
Q Consensus 413 ~~~~~ 417 (421)
+++++
T Consensus 492 ~~~~~ 496 (497)
T 2qma_A 492 LAVEL 496 (497)
T ss_dssp HHHHC
T ss_pred HHHhh
Confidence 88764
No 196
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.96 E-value=1.3e-26 Score=220.56 Aligned_cols=312 Identities=13% Similarity=0.130 Sum_probs=213.5
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCC--CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEEE
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVG--ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANILL 138 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g--~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl~ 138 (421)
.++++.+++.+.+.. .|.+..| ..++|++++++++ .+++++++|++++++.++.++ .++||+|++
T Consensus 10 ~~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~~--------~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~ 77 (394)
T 1o69_A 10 MGGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYSK--------SENALALNSATAALHLALRVAGVKQDDIVLA 77 (394)
T ss_dssp --CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHHC--------CSEEEEESCHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHhC--------CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEE
Confidence 345678888888865 3555556 7899999999983 268999999999999999999 899999999
Q ss_pred cCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 139 PKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 139 ~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
+.|+|+++...+...|++++.++++ +++.+|++++++.+++ ++++|++++ |||.. .++++|.++|+++|
T Consensus 78 ~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~---~~l~~i~~l~~~~~ 149 (394)
T 1o69_A 78 SSFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNA---AKMDEIVEICKEND 149 (394)
T ss_dssp ESSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCC---CCHHHHHHHHHHTT
T ss_pred CCCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCCh---hhHHHHHHHHHHcC
Confidence 9999999999999999999999875 4567999999998876 688888875 89976 67899999999999
Q ss_pred cEEEEccccc-ccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccccc-C
Q 014631 216 IMVISDEVYD-HLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISS-G 293 (421)
Q Consensus 216 ~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 293 (421)
+++|+|++|+ ++.+.+... ..+. + +.+.||||..+++|.|+||+++++ +++.+.+........ .
T Consensus 150 ~~li~Dea~~~g~~~~~~~~---~~~~--~--~~~~s~s~~K~l~~~~~G~~~~~~-------~~l~~~l~~~~~~~~~~ 215 (394)
T 1o69_A 150 IVLIEDAAEALGSFYKNKAL---GTFG--E--FGVYSYNGNKIITTSGGGMLIGKN-------KEKIEKARFYSTQAREN 215 (394)
T ss_dssp CEEEEECTTCTTCEETTEET---TSSS--S--EEEEECCTTSSSCCSSCEEEEESC-------HHHHHHHHHHTBTCCCS
T ss_pred CEEEEECcCcccceeCCccc---cccc--C--cEEEEEeCCccCCCCCceEEEECC-------HHHHHHHHHHHHhcccc
Confidence 9999999998 444433211 1111 1 445556433345577899999953 346666654322110 0
Q ss_pred --------------CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----cee-EEEEec
Q 014631 294 --------------PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----GSM-FVMVKL 354 (421)
Q Consensus 294 --------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----~~~-~~~~~~ 354 (421)
.+.+...++...+ +++++..++.+++++++.+.|+++ +.+. .+. .++ .+++.+
T Consensus 216 ~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~ 287 (394)
T 1o69_A 216 CLHYEHLDYGYNYRLSNVLGAIGVAQM-----EVLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALI 287 (394)
T ss_dssp SSSCCCSSCCCBCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEE
T ss_pred CccccccccCcccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEe
Confidence 1222222222222 336667788889999999999876 5522 221 232 356666
Q ss_pred Cccc--------------ccC--CCChHHHHHHHHhhcCeeEEeCCCCCC-----C---------------CeEEEEec-
Q 014631 355 NLSL--------------LEG--ISDDMEFALQLAKEESVIVLPGMAVGM-----K---------------NWLRITFA- 397 (421)
Q Consensus 355 ~~~~--------------~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~---------------~~iRi~~~- 397 (421)
+... .+. ..+..++... |.++||.+++|..+.. . ..+|+..+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-L~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (394)
T 1o69_A 288 NFDKNELNACQKDINISQKNITLHPKISKLIED-LKNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGT 366 (394)
T ss_dssp SCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHH-HHHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCT
T ss_pred cchhhccccccccccccccccccccCHHHHHHH-HHHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCC
Confidence 5210 000 0023455554 4678999999853300 1 23444444
Q ss_pred -CCHHHHHHHHHHHHHHHHH
Q 014631 398 -IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~~~ 416 (421)
++++|++++++.|+++++.
T Consensus 367 ~~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 367 AMSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp TCCHHHHHHHHHHHHHHHC-
T ss_pred CCCHHHHHHHHHHHHHHHhc
Confidence 7899999999999988643
No 197
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.96 E-value=2e-27 Score=232.25 Aligned_cols=334 Identities=10% Similarity=0.060 Sum_probs=229.9
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-------CCcEEEcCCHHHHHHHHHHHhcCC--
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-------PDDVYLTAGCKQAIQVILTVLARP-- 132 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-------~~~i~~~~g~~~al~~~~~~l~~~-- 132 (421)
.+..+.+++...+.. ....|....+..++++.+++|+.+.+|.+.+ ...+++|+|+|+|+..++.++.++
T Consensus 86 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~ 164 (486)
T 1js3_A 86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV 164 (486)
T ss_dssp HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHh
Confidence 345577777777644 3345655556789999999999998886532 356899999999999888765321
Q ss_pred -------CC--------e--EEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCce------EEEEe
Q 014631 133 -------GA--------N--ILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTV------AMVIV 189 (421)
Q Consensus 133 -------gd--------~--Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~------~i~~~ 189 (421)
|| . |+++.++|+++...++..|++++.++++ .++.+|+++|++.+.++++ +++++
T Consensus 165 ~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~ 242 (486)
T 1js3_A 165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT 242 (486)
T ss_dssp HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 43 3 7889999999999999999999999874 4677999999999876553 78899
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
+|+||||.+ +++++|+++|++||+++++|++|+.+.+....... +..+..- . .+..++||+++.| .++|++++
T Consensus 243 ~~~n~tG~~---~~l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~a-d-si~~~~hK~~~~p-~~~G~l~~ 316 (486)
T 1js3_A 243 LGTTSCCSF---DNLLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEFA-D-SFNFNPHKWLLVN-FDCSAMWV 316 (486)
T ss_dssp BSCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGGC-S-EEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCCCCC---CCHHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCcccc-C-eeEEchhhhcCCC-cceEEEEE
Confidence 999999988 77999999999999999999999886532211111 1112111 2 4456899997665 78999999
Q ss_pred eCCCcchhHHHHHHHHhh---hcc------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Q 014631 269 SDPSGILQELRIVDSIKG---YLN------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADI 327 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~---~~~------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 327 (421)
+++.. +.+.+.. +.. .......+.+.++...+ ...++++..++..+++++
T Consensus 317 ~~~~~------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~---g~~g~~~~~~~~~~~a~~ 387 (486)
T 1js3_A 317 KRRTD------LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMY---GVKGLQAYIRKHVQLSHE 387 (486)
T ss_dssp SCHHH------HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred eCHHH------HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHH---hHHHHHHHHHHHHHHHHH
Confidence 75321 1222210 000 00011223343333333 346788889999999999
Q ss_pred HHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHH
Q 014631 328 CYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALE 404 (421)
Q Consensus 328 ~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~ 404 (421)
+.+.|+++|++.++..|..+.+ .+.++... ....++...+. +.|+.+.++..+....++|++++ +++++++
T Consensus 388 l~~~L~~~~~~~~~~~~~~~~v-~f~~~~~~----~~~~~l~~~L~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~ 461 (486)
T 1js3_A 388 FEAFVLQDPRFEVCAEVTLGLV-CFRLKGSD----GLNEALLERIN-SARKIHLVPCRLRGQFVLRFAICSRKVESGHVR 461 (486)
T ss_dssp HHHHHHHCTTEEECSCCCSSEE-EEEESSCH----HHHHHHHHHHH-HHTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred HHHHHhcCCCeEEeCCCceeEE-EEEecChH----HHHHHHHHHHH-hcCCEEEEEEEECCEEEEEEEeCCCCCCHHHHH
Confidence 9999999989985434554443 34554210 01355666664 45755433333444678999975 5789999
Q ss_pred HHHHHHHHHHHHhhh
Q 014631 405 EGLGRIKAFCQRHAK 419 (421)
Q Consensus 405 ~~~~~l~~~~~~~~~ 419 (421)
+++++|+++++++.+
T Consensus 462 ~~~~~l~~~~~~~~~ 476 (486)
T 1js3_A 462 LAWEHIRGLAAELLA 476 (486)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999877654
No 198
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=2.6e-26 Score=217.90 Aligned_cols=283 Identities=17% Similarity=0.141 Sum_probs=202.5
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~ 161 (421)
....++++.++++++ .+++++++||++|++.++..+.++||+|+++.++|+++...+ ...|.++..++
T Consensus 66 ~~~~~l~~~la~~~g--------~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVED--------AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHTT--------CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHhC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 345688888888873 237889999999999999999999999999999999876655 66788888887
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
.+ |++++++.+++++++|++.+|+||||.+.+ +++|.++|++||+++|+|++|+.... .. ++ .++
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~-~~---~~-~~~ 202 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPAL-QQ---PL-SLG 202 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC---GG-GGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCccccc-CC---hH-HhC
Confidence 53 889999999989999999999999999965 99999999999999999999986421 11 11 222
Q ss_pred CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
..+++.|+||.++.+| .++||+++++ +++.+.+..... ...+.++..+.++...++. +..+.+
T Consensus 203 ---~di~~~S~sK~lg~~g~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~ 267 (392)
T 3qhx_A 203 ---ADVVLHSTTKYIGGHSDVVGGALVTND-------EELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ 267 (392)
T ss_dssp ---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred ---CcEEEEcCccccCCCCCceEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence 2388999999998877 7899999864 346666655443 3346677777776666653 445566
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 383 (421)
+..++.+.+.+.|+++|.+..+..|. .|.++++.++... .....++.. ++..++.+..|
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~G 342 (392)
T 3qhx_A 268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAK-TNIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHh-CCCceECCCCC
Confidence 67788888888888877654232221 2557778886411 023444443 46667777776
Q ss_pred CCCC--------------------CCCeEEEEecCCHHHHHHHHHHHHHH
Q 014631 384 MAVG--------------------MKNWLRITFAIEPSALEEGLGRIKAF 413 (421)
Q Consensus 384 ~~~~--------------------~~~~iRi~~~~~~e~l~~~~~~l~~~ 413 (421)
+.+. .++.+|+|++. |+.+..++.|.++
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~~~i~~l~~a 390 (392)
T 3qhx_A 343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGI--EDVADLLDDLKQA 390 (392)
T ss_dssp CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCS--SCHHHHHHHHHHH
T ss_pred CCCceeeCcccccccccCHHHcCCCCCeEEEEecc--CCHHHHHHHHHHH
Confidence 6531 14679999983 2333344444443
No 199
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=1.9e-26 Score=220.89 Aligned_cols=284 Identities=15% Similarity=0.127 Sum_probs=200.0
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~~~ 162 (421)
...++|+.++++++ . ++.+++++| +++++.++.+++++||+|+++.+.|.++... +...|.+++.++.
T Consensus 115 ~~~~l~~~lA~l~g------~-~~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 186 (445)
T 1qgn_A 115 TTVVLEEKISALEG------A-ESTLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP 186 (445)
T ss_dssp HHHHHHHHHHHHHT------C-SEEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred HHHHHHHHHHHHhC------C-CcEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 34689999999873 2 245555555 5999999999999999999999999987653 5667988888864
Q ss_pred cCCCCccCCHHHHHhhhccCc-eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 163 LPEKGWEVDLDGLEALADENT-VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~-~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
+ |++++++.+++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.... ..++ .++
T Consensus 187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~----~~~~-~~g 251 (445)
T 1qgn_A 187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLN----QKAL-ALG 251 (445)
T ss_dssp S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTT----CCTT-TTT
T ss_pred C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCcc-ccC
Confidence 2 8899999998888 99999999999999975 78999999999999999999986432 1111 222
Q ss_pred CCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc-ccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI-SSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
..+++.|+||.++..| .++||++++ +++++.+...... ..+.++.....+...++. +..+.+
T Consensus 252 ---~Div~~S~sK~~gg~gd~~~G~l~~~--------~~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 315 (445)
T 1qgn_A 252 ---ADLVLHSATKFLGGHNDVLAGCISGP--------LKLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ 315 (445)
T ss_dssp ---CSEEEECTTTTTTCSSSCCCEEEEEC--------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred ---CEEEEECCcccccccccceEEEEEEC--------HHHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence 2388999999987655 479999985 3566666554432 223455555554444432 445556
Q ss_pred HHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC
Q 014631 320 ILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG 383 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 383 (421)
+..++++.+.+.|+++|++..+..| ..+.++++.++... .....++.. ++..++.++.|
T Consensus 316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----~~~~~~l~~-l~~~~i~~s~G 390 (445)
T 1qgn_A 316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----LTTAKFVDA-LKIPYIAPSFG 390 (445)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----HHHHHHHHH-CSSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----HHHHHHHHh-CCCceEeccCC
Confidence 6677788899999988776213233 13557777776310 012334433 23346777776
Q ss_pred CCCC----------------------C-CCeEEEEecCCHHHHHHHHHHHHHHHHH
Q 014631 384 MAVG----------------------M-KNWLRITFAIEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 384 ~~~~----------------------~-~~~iRi~~~~~~e~l~~~~~~l~~~~~~ 416 (421)
..+. . ++.+|+|++ .|+++.+++.|++++++
T Consensus 391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG--~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFG--VEDFDDLKADILQALDS 444 (445)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECC--SSCHHHHHHHHHHHHHH
T ss_pred CCceeeecccccccccCCHHHHHhcCCCCCeEEEEec--cCCHHHHHHHHHHHHhh
Confidence 5431 1 368999998 45799999999998864
No 200
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.95 E-value=2.2e-26 Score=218.36 Aligned_cols=282 Identities=16% Similarity=0.135 Sum_probs=197.5
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~ 160 (421)
.....++++.++++++ .+ +.+++++|++|+..++.++.++||+|+++.|+|+++... ++..|.+++.+
T Consensus 58 ~~~~~~l~~~la~~~g------~~--~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 129 (389)
T 3acz_A 58 NPTVEQFEEMVCSIEG------AA--GSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLI 129 (389)
T ss_dssp CHHHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ChHHHHHHHHHHHHhC------CC--eEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEE
Confidence 3445789999999883 22 566777788999999998889999999999999987655 57789998888
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+. .|++++++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.. +. ++. +
T Consensus 130 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~-~~---~~~-~ 194 (389)
T 3acz_A 130 DT-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCF-LK---PLE-L 194 (389)
T ss_dssp CT-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTT-CC---GGG-T
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc-cC---ccc-c
Confidence 75 3889999999888999999999999999976 88999999999999999999987543 11 221 2
Q ss_pred CCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+..+++.|+||.++++|.|+ ||+++++ +++++.+..... ...+.++..+.++...++. +..+.
T Consensus 195 ---~~di~~~S~sK~~~~~~~~~~G~v~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~ 259 (389)
T 3acz_A 195 ---GADIALHSVSKYINGHGDVIGGVSSAKT-------AEDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRM 259 (389)
T ss_dssp ---TCSEEEEETTTTTTCSSCCCCEEEEESS-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHH
T ss_pred ---CCeEEEECChhhccCCCCceeEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHH
Confidence 23488999999999999998 9999863 145566655443 2335566666666666653 23334
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCC----------------CCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 319 DILRDTADICYDRIKEIPCITCPRK----------------PEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
++..++.+.+.+.|++++.+..+.. ...+.++.+.++ . .+....++.+.|+.+.+
T Consensus 260 ~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~ 330 (389)
T 3acz_A 260 QIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLA 330 (389)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEB
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEEC
Confidence 4445556666666655432211100 112445556664 2 23345667788998877
Q ss_pred ---C------CCC----------------CC-CCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 383 ---G------MAV----------------GM-KNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 383 ---g------~~~----------------~~-~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
| ..+ +. ++.+|+|++.. +.+++++.|.++++
T Consensus 331 ~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 331 VSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp SCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred cCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 3 212 11 47899999843 55666666666654
No 201
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=6.5e-26 Score=222.09 Aligned_cols=337 Identities=10% Similarity=0.036 Sum_probs=229.5
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC-----------
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----------- 131 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----------- 131 (421)
+..+.+++...+.. ....|....+..++++.+++|+.+.+|.+.+++.+++|+|+|+|+..++.++.+
T Consensus 109 ~~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~ 187 (511)
T 3vp6_A 109 IGLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGM 187 (511)
T ss_dssp HHHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCG
T ss_pred HHHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCc
Confidence 34455666666654 334777777788999999999999988776678999999999999988876643
Q ss_pred ---CCCeEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeCCCCCccccc
Q 014631 132 ---PGANILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 132 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~p~nptG~~~ 199 (421)
+++.|+++.++|+++...++..|. +++.++.+ .++.+|+++|++++.++ ++++++++|+|+||.+
T Consensus 188 ~~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~v- 264 (511)
T 3vp6_A 188 AAVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAF- 264 (511)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCB-
T ss_pred ccCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccc-
Confidence 567899999999999999999998 78888875 34679999999988654 7888999999999999
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-ccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHH
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQEL 278 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 278 (421)
+++++|+++|++||+++++|++|+......... ..+.... .-.+++.++||+++.| ..+|+++++++.
T Consensus 265 --d~l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~------ 333 (511)
T 3vp6_A 265 --DPIQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG------ 333 (511)
T ss_dssp --CCHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT------
T ss_pred --ccHHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH------
Confidence 679999999999999999999998865422211 1111111 1125667999997655 668999987643
Q ss_pred HHHHHHhhh-cccc------------------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 279 RIVDSIKGY-LNIS------------------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 279 ~~~~~~~~~-~~~~------------------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
+.+..... ..+. .+........+..++......+++++.++..++.+++.+.|+++|+++
T Consensus 334 -~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~pg~~ 412 (511)
T 3vp6_A 334 -ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNREEFE 412 (511)
T ss_dssp -HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTEE
T ss_pred -HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 22322110 0000 000011122233334333457889999999999999999999999998
Q ss_pred ccC--CCCceeEEEEecCcccccCCC-C----------hHHHHHHHHhhcCeeEEeCCC-CCCCCeEEEEec---CCHHH
Q 014631 340 CPR--KPEGSMFVMVKLNLSLLEGIS-D----------DMEFALQLAKEESVIVLPGMA-VGMKNWLRITFA---IEPSA 402 (421)
Q Consensus 340 ~~~--~~~~~~~~~~~~~~~~~~~~~-~----------~~~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~~---~~~e~ 402 (421)
++. .|..+... +.+......+.. + ..++...| .++|+.+..... .+..+++|++++ ++.++
T Consensus 413 l~~~~~p~~~~v~-f~~~p~~~~~~~~~~~~~~~l~~~~~~l~~~L-~~~G~~~~~~~~~~~~~~~lRi~~~~~~~t~~d 490 (511)
T 3vp6_A 413 MVFNGEPEHTNVC-FWYIPQSLRGVPDSPQRREKLHKVAPKIKALM-MESGTTMVGYQPQGDKANFFRMVISNPAATQSD 490 (511)
T ss_dssp ESSSSCCSSSCEE-EEECCGGGSSCCCCHHHHHHHHHHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEECCCCTTCCHHH
T ss_pred EEecCCCCeEEEE-EEEeCccccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEeCCceEEEEEEecCCCCCHHH
Confidence 554 35555433 333221111000 0 12355555 455765543111 112347999984 68899
Q ss_pred HHHHHHHHHHHHHHh
Q 014631 403 LEEGLGRIKAFCQRH 417 (421)
Q Consensus 403 l~~~~~~l~~~~~~~ 417 (421)
|+.+++.|+++-+.+
T Consensus 491 i~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 491 IDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999998876543
No 202
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.95 E-value=3.9e-26 Score=220.28 Aligned_cols=345 Identities=14% Similarity=0.052 Sum_probs=214.0
Q ss_pred CeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCC------CCCCHHHHHHHHHHHhhhCCCCCCCC---cEEEc
Q 014631 45 PIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSP------SVGILPARRAIADYLNSELPCKLSPD---DVYLT 115 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~------~~g~~~l~~~ia~~l~~~~~~~~~~~---~i~~~ 115 (421)
..+.|..+ ++ +.++.|++++...+.+....+|+. .....++++...+.+.+.+| .+.+ ..+++
T Consensus 55 ~~i~lias-~n-----~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~a~l~g--~~~~~~~~~v~~ 126 (490)
T 2a7v_A 55 RGLELIAS-EN-----FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFD--LDPAQWGVNVQP 126 (490)
T ss_dssp HSEECCTT-CC-----CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHHHHHTT--CCTTTEEEECCC
T ss_pred cCceEECC-CC-----CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHHHHHcC--CCcccCceEEeC
Confidence 45666543 22 468999999988876533223332 22245788555566655555 3343 23556
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH--------HHhhcCcee--EeeeccCCCCccCCHHHHHhhhc-cCce
Q 014631 116 AGCKQAIQVILTVLARPGANILLPKPGFPLYEA--------NARHTRLEI--RHFDLLPEKGWEVDLDGLEALAD-ENTV 184 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~--------~~~~~g~~~--~~~~~~~~~~~~~d~e~l~~~~~-~~~~ 184 (421)
++|++|+..++.++++|||+|+++++.|.++.. .+...|..+ +.+++++ ..+.+|+|++++.+. .+++
T Consensus 127 ~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~~~~iD~d~le~~l~~~~~k 205 (490)
T 2a7v_A 127 YSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-KTGLIDYNQLALTARLFRPR 205 (490)
T ss_dssp SSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-ccCCcCHHHHHHHHhhcCCc
Confidence 688999999999999999999999998865421 223445443 3444433 346799999999875 3678
Q ss_pred EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCcccccccCCCCCEEEEcccccccCCCCceE
Q 014631 185 AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRL 263 (421)
Q Consensus 185 ~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 263 (421)
+|+++.++||+ . .++++|.++|++||+++++|++|.. +...|....++. .. .+++.|+||++ .|.+.
T Consensus 206 lIi~~~s~~~~--~---~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a---Div~~S~hK~l--~Gp~G 273 (490)
T 2a7v_A 206 LIIAGTSAYAR--L---IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA---DIVTTTTHKTL--RGARS 273 (490)
T ss_dssp EEEECCSSCCS--C---CCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC---SEEEEESSGGG--CSCSC
T ss_pred EEEEcCCCCCC--c---ccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC---CEEEECCcccC--ccccc
Confidence 88888888875 3 2489999999999999999999853 333343333332 11 27788999986 45677
Q ss_pred EEEEeeCCCcchh-------HHHHHHHHhhhcc--cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 264 GWLVTSDPSGILQ-------ELRIVDSIKGYLN--ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 264 G~~~~~~~~~~~~-------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
|++++++.....+ ..++.+++..... ..++++.....++..++.......+++..++..++++++.+.|.+
T Consensus 274 G~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~~~~~~na~~L~~~L~~ 353 (490)
T 2a7v_A 274 GLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLE 353 (490)
T ss_dssp EEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 9999975310000 0013344443322 123455555555555555433345578888999999999999998
Q ss_pred CCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC-----CCCeEEEEec------CCHHHH
Q 014631 335 IPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG-----MKNWLRITFA------IEPSAL 403 (421)
Q Consensus 335 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~iRi~~~------~~~e~l 403 (421)
. |+.++..+..++++|+.+.... .+..+ +..+|++.||.+..+..++ .+..+|++.. .+++++
T Consensus 354 ~-G~~v~~~~t~t~lv~vdl~~~g----~~~~~-~~~~L~~~GI~v~~~~~p~d~~p~~~~~iRig~~a~t~~g~~~~d~ 427 (490)
T 2a7v_A 354 R-GYSLVSGGTDNHLVLVDLRPKG----LDGAR-AERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDF 427 (490)
T ss_dssp T-TCEEGGGSCSSSEEEEECTTTT----CCHHH-HHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHH
T ss_pred c-CcEEecCCCCCeEEEEEeCCCC----CCHHH-HHHHHHhCCeEEecCccCCCCCCCCCCceEecccccccCCCCHHHH
Confidence 7 8874433345678888876431 13444 5556688999998764443 2578999763 478999
Q ss_pred HHHHHHHHHHHHH
Q 014631 404 EEGLGRIKAFCQR 416 (421)
Q Consensus 404 ~~~~~~l~~~~~~ 416 (421)
+++++.|.++++.
T Consensus 428 ~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 428 RRVVDFIDEGVNI 440 (490)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998864
No 203
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=1.3e-26 Score=220.04 Aligned_cols=283 Identities=17% Similarity=0.108 Sum_probs=193.9
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEeee
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHFD 161 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~~ 161 (421)
....++|+.++++++ .+ +.+++++|++|++.++. ++++||+|+++.|.|++... .++..|.+++.++
T Consensus 55 ~~~~~lr~~la~~~g------~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 55 PNRENLERAVAALEN------AQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHHTT------CS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hhHHHHHHHHHHHhC------CC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 446799999999973 22 45556666999999999 88999999999999986544 4566788888887
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc----CcEEEEcccccccccCCCCcccc
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL----GIMVISDEVYDHLTFGSTPYVRM 237 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~ 237 (421)
.+ | +++++.+++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+.+.+. . .
T Consensus 126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~ 189 (393)
T 1n8p_A 126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P 189 (393)
T ss_dssp SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence 53 6 8899988888999999999999999986 88999999999 9999999999987642 1 1
Q ss_pred cccCCCCCEEEEcccccccCCCCceE-EEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHH
Q 014631 238 GVFGSTVPVITLGSMSKRWIVPGWRL-GWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 238 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
..++ ..+++.|+||.++.+|+|+ ||+++++ +++.+.+..... ...+.++..+.++...++. +.
T Consensus 190 ~~~~---~di~~~S~sK~~g~~G~rigG~~~~~~-------~~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~ 254 (393)
T 1n8p_A 190 LNFG---ADIVVHSATKYINGHSDVVLGVLATNN-------KPLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH 254 (393)
T ss_dssp GGGT---CSEEEEETTTTTTCSSCCCCEEEEESC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred HHcC---CeEEEEECcccccCCCCceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence 2222 3488999999999999999 9988742 245666655432 2234455555555555542 44
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-ccccCCC---------------C--c-eeEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631 316 KIVDILRDTADICYDRIKEIPC-ITCPRKP---------------E--G-SMFVMVKLNLSLLEGISDDMEFALQLAKEE 376 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~~~~g-~~~~~~~---------------~--~-~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 376 (421)
...++..++++.+.+.|.+.+. +..+..| . . +..+++.++... .+...++.. ++..
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~-l~~~ 329 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASS-TRLF 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHH-CSSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhh-CCcc
Confidence 4555666777777778877644 3211111 1 2 557777776310 012333333 2334
Q ss_pred CeeEEeCC----------CCC------------C-CCeEEEEec--CCHHHHHHHHHHHHHH
Q 014631 377 SVIVLPGM----------AVG------------M-KNWLRITFA--IEPSALEEGLGRIKAF 413 (421)
Q Consensus 377 gv~v~~g~----------~~~------------~-~~~iRi~~~--~~~e~l~~~~~~l~~~ 413 (421)
++.+..|+ ..+ . ++.+|+|++ +++++++.+.++|+++
T Consensus 330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 55544442 111 1 368999999 5667777777777654
No 204
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.95 E-value=1.2e-26 Score=220.79 Aligned_cols=211 Identities=16% Similarity=0.119 Sum_probs=156.4
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH----HhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN----ARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~----~~~~g~~~~~~ 160 (421)
..+..++|+.++++++ . .+.|++++| ++|+..++. ++++||+|++++|+|++.... ++..|.+++.+
T Consensus 66 ~p~~~~l~~~la~~~g------~-~~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v 136 (403)
T 3cog_A 66 NPTRNCLEKAVAALDG------A-KYCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFV 136 (403)
T ss_dssp CHHHHHHHHHHHHHHT------C-SEEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEE
T ss_pred CchHHHHHHHHHHHhC------C-CcEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEE
Confidence 3456899999999984 2 255666655 689999998 889999999999999875443 45679998888
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC-cEEEEcccccccccCCCCcccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG-IMVISDEVYDHLTFGSTPYVRMGV 239 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~ 239 (421)
+.+ |++++++.+++++++|++++|+||||.+++ +++|+++|+++| +++|+|++|+.+.+. .++.
T Consensus 137 ~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~----~~~~- 201 (403)
T 3cog_A 137 DCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ----RPLA- 201 (403)
T ss_dssp CTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----CTTT-
T ss_pred CCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----Cccc-
Confidence 753 789999999889999999999999999986 889999999999 999999999986532 1221
Q ss_pred cCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHH
Q 014631 240 FGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 240 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
+ +..+++.|+||.++++| .|+||+++++ +++.+.+..... ...+.+++.+.++...++. +..+
T Consensus 202 ~---~~div~~S~sK~~~g~~~~~~G~v~~~~-------~~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r 266 (403)
T 3cog_A 202 L---GADISMYSATKYMNGHSDVVMGLVSVNC-------ESLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT-----LHVR 266 (403)
T ss_dssp T---TCSEEEEETTTTTTCSSCCCCEEEEECC-------HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHH
T ss_pred c---CCeEEEEcChhhccCCCCCeEEEEEECc-------HHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHH
Confidence 2 34588999999988766 4799999853 356666665443 2345677787777777753 2233
Q ss_pred HHHHHHHHHHHHHHhhc
Q 014631 318 VDILRDTADICYDRIKE 334 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~ 334 (421)
.++..++...+.+.+++
T Consensus 267 ~~~~~~n~~~l~~~l~~ 283 (403)
T 3cog_A 267 MEKHFKNGMAVAQFLES 283 (403)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 34444444445555443
No 205
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.95 E-value=1.8e-25 Score=215.62 Aligned_cols=315 Identities=16% Similarity=0.140 Sum_probs=213.1
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh---------cCC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL---------ARP 132 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l---------~~~ 132 (421)
.++.+.+++.+.+... .|.+..+..++|+.++++++ . ++++++++|++++..++.++ .++
T Consensus 41 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~g------~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~ 109 (437)
T 3bb8_A 41 IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYLG------V--PYVLTTTSGSSANLLALTALTSPKLGVRALKP 109 (437)
T ss_dssp CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCT
T ss_pred CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHHC------C--CcEEEeCCHHHHHHHHHHHhhhcccccccCCC
Confidence 4578889998888752 35555678899999999984 2 26788888889999999988 789
Q ss_pred CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHH
Q 014631 133 GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKAR 212 (421)
Q Consensus 133 gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~ 212 (421)
||+|+++.|+|+++...+...|++++.++++++ ++.+|++++++.+++++++|++++ ++|.. .++++|.++|+
T Consensus 110 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~ 182 (437)
T 3bb8_A 110 GDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSDKTKAIMIAH---TLGNL---FDLAEVRRVAD 182 (437)
T ss_dssp TCEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCCCCeEEEEeC---CCCCh---hcHHHHHHHHH
Confidence 999999999999999999999999999987642 567899999999988889888875 23443 46899999999
Q ss_pred hcCcEEEEcccccccc-cCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--
Q 014631 213 KLGIMVISDEVYDHLT-FGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-- 289 (421)
Q Consensus 213 ~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (421)
++|+++|+|++|+.+. +.+ ..++...+ +++.||+|.++++|.++|++++++.. + .++...+.....
T Consensus 183 ~~~~~li~D~a~~~g~~~~~------~~~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~~~-~---~~~~~~~~~~~~~~ 251 (437)
T 3bb8_A 183 KYNLWLIEDCCDALGSTYDG------KMAGTFGD-IGTVSFYPAKHITMGEGGAVFTQSAE-L---KSIIESFRDWGRDC 251 (437)
T ss_dssp HHTCEEEEECTTCTTCEETT------EETTSSSS-EEEEECSTTSSSCCSSCEEEEESCHH-H---HHHHHHHHBTTBCC
T ss_pred HcCCEEEEECccccCceECC------eecccccC-EEEEECcCCcCCCCCCeEEEEeCCHH-H---HHHHHHHHHhCccc
Confidence 9999999999998533 211 11221112 66778888888898999999986311 0 011111111100
Q ss_pred -----------------------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc
Q 014631 290 -----------------------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 290 -----------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
.....+.+...++...++. +.+..++.+++.+++.+.|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~l~~~L~~ 326 (437)
T 3bb8_A 252 YCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-----IEEFVEKRKANFKYLKDALQS 326 (437)
T ss_dssp ----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHGGG
T ss_pred ccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhhc
Confidence 0001233444444444432 244455557788899999998
Q ss_pred CCCccccCCC-Cc---e--eEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCC----C----------------
Q 014631 335 IPCITCPRKP-EG---S--MFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVG----M---------------- 388 (421)
Q Consensus 335 ~~g~~~~~~~-~~---~--~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~---------------- 388 (421)
++++...... .. + .|. +.++... ..+..++...| .++||.++++.... .
T Consensus 327 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 401 (437)
T 3bb8_A 327 CADFIELPEATENSDPSWFGFP-ITLKEDS---GVSRIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGELTNT 401 (437)
T ss_dssp GTTTEECCCCCTTEECCCSSEE-EEECGGG---SSCHHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCEECSCCHHH
T ss_pred cCCccccCCCCCCCceeeEEEE-EEECCcC---cCcHHHHHHHH-HHCCCceeccCCcccccCchhhccCccccCCCcHH
Confidence 8775522111 01 2 122 2232110 01355666655 66799998875411 0
Q ss_pred ----CCeEEEEec--CCHHHHHHHHHHHHHHHH
Q 014631 389 ----KNWLRITFA--IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 389 ----~~~iRi~~~--~~~e~l~~~~~~l~~~~~ 415 (421)
.+.+|++++ ++++|++++++.|+++++
T Consensus 402 ~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 402 DRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp HHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred HHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 124899987 799999999999998764
No 206
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=4.1e-26 Score=215.22 Aligned_cols=314 Identities=13% Similarity=0.113 Sum_probs=214.0
Q ss_pred CCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHH-HHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-cCCCCeEE
Q 014631 60 FRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAI-ADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-ARPGANIL 137 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~i-a~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-~~~gd~Vl 137 (421)
++.++.+.+++.+.++.+....|++ ...++|+++ +++++ ..+++++++|+++++.+++.++ +++||+|+
T Consensus 12 ~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~g-------~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi 82 (377)
T 3ju7_A 12 TVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFFQ-------NRGAVTTVANATLGLMAAIQLKKRKKGKYAL 82 (377)
T ss_dssp CCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTST-------TCSEEEEESCHHHHHHHHHHHHSCTTCCEEE
T ss_pred CCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHhC-------CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEE
Confidence 6888999999999988754322333 368999999 99873 2567899999999999999998 89999999
Q ss_pred EcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh-ccC--ceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 138 LPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA-DEN--TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 138 ~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~-~~~--~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
++.++|.++...+...|++++.+++++ +++.+|++++++++ +++ +++|+ |+||+|...+ +++|.++|+ |
T Consensus 83 ~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~-~ 154 (377)
T 3ju7_A 83 MPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK-K 154 (377)
T ss_dssp EESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH-T
T ss_pred ECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh-c
Confidence 999999999999999999999998864 45789999999987 556 77665 7789999855 778888899 9
Q ss_pred CcEEEEcccccccccCCCCcccc-cccCCCCCEEEEccc--ccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhccc-
Q 014631 215 GIMVISDEVYDHLTFGSTPYVRM-GVFGSTVPVITLGSM--SKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNI- 290 (421)
Q Consensus 215 ~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~- 290 (421)
|+++|+|++|+....... ..+ ..+. + +.+.|| +|.++. | +.|++++++ +++.+++......
T Consensus 155 ~~~vi~D~a~a~g~~~~~--~~~g~~~~--d--~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~~~g 219 (377)
T 3ju7_A 155 GVPVVVDAAPGFGLMNGG--MHYGQDFS--G--MIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMGNFG 219 (377)
T ss_dssp TCCBEEECTTCTTCEETT--EETTTTCS--S--EEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred CCEEEEECCCccCCeECC--EeccCCCC--c--EEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHHhcC
Confidence 999999999986432110 011 0111 1 445555 588764 4 578888754 3455655544321
Q ss_pred ------------ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce-----eEEEEe
Q 014631 291 ------------SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS-----MFVMVK 353 (421)
Q Consensus 291 ------------~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~-----~~~~~~ 353 (421)
....+.+..+.+...++ .++...++.+++++.+.+.|++++++.....+..+ .|+.+.
T Consensus 220 ~~~~~~~~~~g~~~~~~~~~aa~~~~~l~-----~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (377)
T 3ju7_A 220 FDTNRECTMMGFNCKMSEYAAAIGIATMK-----KWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFMPIL 294 (377)
T ss_dssp BCTTSCBCSSCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSEEEE
T ss_pred CCCCCceeeccccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEEEEE
Confidence 12234444333333343 35666777778888888888887654211122221 133344
Q ss_pred cCcccccCCCChHHHHHHHHhhcCeeEEeCCC--CCC-------------------CCeEEEEec--CCHHHHHHHHHHH
Q 014631 354 LNLSLLEGISDDMEFALQLAKEESVIVLPGMA--VGM-------------------KNWLRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--~~~-------------------~~~iRi~~~--~~~e~l~~~~~~l 410 (421)
++.. .+..++.. .|+++||.+..+.. ++. ...+|+.++ .+++|++++++.|
T Consensus 295 ~~~~-----~~~~~l~~-~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~~~l 368 (377)
T 3ju7_A 295 CPEE-----VRNKQVIE-DLKKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIVICL 368 (377)
T ss_dssp CCTT-----SCHHHHHH-HHHTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred eCCh-----hhHHHHHH-HHHHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHHHHH
Confidence 4421 12344554 45778999987752 110 246899887 7899999999999
Q ss_pred HHHHHH
Q 014631 411 KAFCQR 416 (421)
Q Consensus 411 ~~~~~~ 416 (421)
++++..
T Consensus 369 ~~~~~~ 374 (377)
T 3ju7_A 369 GQKVVS 374 (377)
T ss_dssp TC----
T ss_pred HHHHhc
Confidence 888764
No 207
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.95 E-value=8.6e-26 Score=215.67 Aligned_cols=291 Identities=15% Similarity=0.107 Sum_probs=197.1
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH----HHhhcCceeEee
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA----NARHTRLEIRHF 160 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g~~~~~~ 160 (421)
.....+|++.++++++ .+..+++++|++|+..++.+++++||+|++++|.|.++.. .+...|.+++.+
T Consensus 81 ~p~~~~le~~lA~l~g--------~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v 152 (430)
T 3ri6_A 81 NPTVEDLEQRLKNLTG--------ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFV 152 (430)
T ss_dssp CHHHHHHHHHHHHHHT--------CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHHC--------CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEe
Confidence 3446789999999873 2346666677899999999999999999999999998876 667889998888
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+.+ |++++++++++++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+...+ ..+. ..
T Consensus 153 ~~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~----~~~~-~~ 217 (430)
T 3ri6_A 153 DVM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYL----LEAK-RL 217 (430)
T ss_dssp CTT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTT----CCGG-GG
T ss_pred CCC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChH-Hc
Confidence 753 889999999989999999999999999975 77899999999999999999986432 1111 22
Q ss_pred CCCCCEEEEcccccccCCCCceEEEEEe-eCCCcch---hHHH---------HHHHHhhh--cccccCCchHHHHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWRLGWLVT-SDPSGIL---QELR---------IVDSIKGY--LNISSGPATFVQGAVPQI 305 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~---~~~~---------~~~~~~~~--~~~~~~~~~~~~~~~~~~ 305 (421)
+. .+++.|+||.++.+|..+|.+++ +....+. ..++ ++...... .......++.....+...
T Consensus 218 g~---div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~ 294 (430)
T 3ri6_A 218 GV---DIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLG 294 (430)
T ss_dssp TC---SEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHH
T ss_pred CC---EEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 22 38899999999877665555555 2222110 0011 12222211 112223444443333332
Q ss_pred hhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHH
Q 014631 306 FKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFA 369 (421)
Q Consensus 306 l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~ 369 (421)
+ +.+..+.++..+++..+.+.|++.|++..+..|. +|+.+|++++... ....++
T Consensus 295 l-----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~~-----~~~~~~ 364 (430)
T 3ri6_A 295 L-----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESKE-----ASYRFM 364 (430)
T ss_dssp H-----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSHH-----HHHHHH
T ss_pred h-----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCHH-----HHHHHH
Confidence 3 3355666777889999999999888876444554 4548888887321 234454
Q ss_pred HHHHhhcCeeEEeCCCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 370 LQLAKEESVIVLPGMAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 370 ~~ll~~~gv~v~~g~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
..+ +..++.+.+|..+. .++.||+|++. |+.+.+++.|++++
T Consensus 365 ~~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~--E~~~dl~~dl~~al 429 (430)
T 3ri6_A 365 DAL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGI--EEIEDLKEDILQAL 429 (430)
T ss_dssp HHC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred HhC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHhh
Confidence 443 55566666776543 14689999984 34445555555554
No 208
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.95 E-value=1.3e-25 Score=218.74 Aligned_cols=332 Identities=11% Similarity=0.055 Sum_probs=231.2
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC--------CcEEEcCCHHHHHHHHHHHhcC---
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP--------DDVYLTAGCKQAIQVILTVLAR--- 131 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~--------~~i~~~~g~~~al~~~~~~l~~--- 131 (421)
+..+.+.+...++. +...|....+..++++.+++|+.+.+|.+... ...++|+|||+++..++.+..+
T Consensus 92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 45556666666654 34578777788999999999999988865322 3678999999998887765532
Q ss_pred ----------------CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEe
Q 014631 132 ----------------PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIV 189 (421)
Q Consensus 132 ----------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~ 189 (421)
+++.|+++.++|.++...+...|.+++.++++ .++.+|+++|+++++++ +.+++++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~ 248 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT 248 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 56799999999999999999999999999874 45679999999988653 5667888
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc-ccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR-MGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
.++|+||.+ +++++|+++|++||+++++|++|+.+.+....... +..+.. -..+..++||+++.| ..+|++++
T Consensus 249 ~~~t~~G~i---d~l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~--aDsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 249 LGTTGVCAF---DCLSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY--ADSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp BSCTTTCCB---CCHHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEE
T ss_pred cCCCCCcCc---CCHHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc--CCEEEEChHHhcCCC-CceEEEEE
Confidence 999999998 67999999999999999999999875432221111 111111 124566899997655 45788888
Q ss_pred eCCCcchhHHHHHH-HHhhhccc-c----------------cC--CchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHH
Q 014631 269 SDPSGILQELRIVD-SIKGYLNI-S----------------SG--PATFVQGAVPQIFKNTKEDFFSKIVDILRDTADIC 328 (421)
Q Consensus 269 ~~~~~~~~~~~~~~-~~~~~~~~-~----------------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 328 (421)
+++ .... .+.....+ . .+ ...+.+.++...+ ...+++++.++..++++++
T Consensus 323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~---g~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSF---GVKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH
T ss_pred eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHH
Confidence 652 2221 11100000 0 00 1123333333333 3467888899999999999
Q ss_pred HHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHH
Q 014631 329 YDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEE 405 (421)
Q Consensus 329 ~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~ 405 (421)
.+.|+++|++.++ .+....++++.++... ....++..++.++..+.+.|+.. ....++|++++ ++++++++
T Consensus 393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~ 466 (481)
T 4e1o_A 393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR 466 (481)
T ss_dssp HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence 9999999999954 4445566777775311 02456666665543355555432 23468999976 47899999
Q ss_pred HHHHHHHHHHHhhh
Q 014631 406 GLGRIKAFCQRHAK 419 (421)
Q Consensus 406 ~~~~l~~~~~~~~~ 419 (421)
++++|+++.+++.+
T Consensus 467 ~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 467 DWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887654
No 209
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.94 E-value=4e-26 Score=221.66 Aligned_cols=341 Identities=11% Similarity=0.028 Sum_probs=222.5
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcC---CCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSA---EFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~ 118 (421)
.|..++||..|......+ ..+|.+.+++.+++... ....|+. ....++++.+++.+.+..+ ...+++++++||
T Consensus 61 dG~~ylD~~~g~~~~~lG-h~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sG 136 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPIG-YSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG 136 (472)
T ss_dssp TSCEEEESSHHHHTCSSC-BTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred CCCEEEECCCCHhhcccC-CCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence 477899998887553322 46899999999876421 1123433 3357899999997776554 356799999999
Q ss_pred HHHHHHHHHHhc--------C-----------------CC---CeEEEcCCCCcchHHHHh-hcCcee-----------E
Q 014631 119 KQAIQVILTVLA--------R-----------------PG---ANILLPKPGFPLYEANAR-HTRLEI-----------R 158 (421)
Q Consensus 119 ~~al~~~~~~l~--------~-----------------~g---d~Vl~~~p~y~~~~~~~~-~~g~~~-----------~ 158 (421)
++|+..+++.+. . || ++|++.+++|+++...+. ..|.+. .
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP 216 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence 999999998773 1 46 899999999998765553 223211 1
Q ss_pred eeeccCC-----CC--c-----cCCHHHHHhhhcc------CceEEEEeCCCCCcccc-cCHHHHHHHHHHHHhcCcEEE
Q 014631 159 HFDLLPE-----KG--W-----EVDLDGLEALADE------NTVAMVIVNPGNPCGNV-FTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 159 ~~~~~~~-----~~--~-----~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li 219 (421)
.++.+.. .. + ..|+++|++.+++ ++++|++...+|++|.+ .+++.+++|.++|++||+++|
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli 296 (472)
T 1ohv_A 217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL 296 (472)
T ss_dssp EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 1122100 00 0 1267888888865 56666555557889975 678999999999999999999
Q ss_pred EcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhc-ccccCCchHH
Q 014631 220 SDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYL-NISSGPATFV 298 (421)
Q Consensus 220 ~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 298 (421)
+||+|+++.+.|.. ..+..++.. ....+.||||.+ ++| ||++ +. ++. .+.... ..+.+.++++
T Consensus 297 ~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~ 360 (472)
T 1ohv_A 297 VDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSK 360 (472)
T ss_dssp EECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHH
T ss_pred EeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHH
Confidence 99999987665542 233333311 001134899995 444 7765 31 121 111222 2334678889
Q ss_pred HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcC----CC-ccccCCCCceeEEEEecCcccccCCCChHHHHHHHH
Q 014631 299 QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEI----PC-ITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLA 373 (421)
Q Consensus 299 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll 373 (421)
+.++.++|+...+ ++..++++++++++.+.|+++ |+ +..+ .+. |.++++.++... ....++..++
T Consensus 361 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~~~-~~~-g~~~~~~~~~~~-----~~~~~~~~l~ 430 (472)
T 1ohv_A 361 NLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFISRV-RGR-GTFCSFDTPDES-----IRNKLISIAR 430 (472)
T ss_dssp HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCEEE-EEE-TTEEEEECSSHH-----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEEee-cCC-ceEEEEEeCChh-----HHHHHHHHHH
Confidence 9888888864222 234566667777777766643 43 3312 333 556666765311 2456666665
Q ss_pred hhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 374 KEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 374 ~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
++||.+.|+. .+++|++++ ++++++++++++|.++++++
T Consensus 431 -~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 471 (472)
T 1ohv_A 431 -NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILADF 471 (472)
T ss_dssp -HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred -HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 5799999863 478999876 78999999999999998754
No 210
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.94 E-value=3.4e-26 Score=221.47 Aligned_cols=299 Identities=11% Similarity=0.083 Sum_probs=202.2
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH-HHHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcCceeEeeeccC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCK-QAIQVILTVLAR--PGANILLPKPGFPLYEANARHTRLEIRHFDLLP 164 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~-~al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~ 164 (421)
..++++.+.+++.+.+|. +++ +++|+|+| .++..++.++.. +|+.|++++++|+++...++..|++++.++..+
T Consensus 131 ~~~~~~~~~~~la~~~g~--~~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGL--NVH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTC--CCE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCC--CCC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 356666677777776664 344 99999999 455545555433 678899999999999999999999999888643
Q ss_pred -CCCccCCHHHHHhhh-c----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631 165 -EKGWEVDLDGLEALA-D----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 165 -~~~~~~d~e~l~~~~-~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 238 (421)
++++.+|++++++.+ + .++.++++++|+||||.+ .++++|.++|+++|+++++|++|+.+..+ .......
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i---~~l~~I~~la~~~g~~v~vD~A~~~~~~g-~~~~~~~ 283 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNS---DDIVEIAKICENYDIPHIINGAYAIQNNY-YLEKLKK 283 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHH-HHHHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCc---CCHHHHHHHHHHcCCcEEEECcchHHHHH-hhHHHHH
Confidence 345789999999988 4 356667789999999999 55888999999999999999999875431 1011111
Q ss_pred ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccC-CchHHHHHHHHHhhccchhHHHHH
Q 014631 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSG-PATFVQGAVPQIFKNTKEDFFSKI 317 (421)
Q Consensus 239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~ 317 (421)
.+... ..+++.|+||++ .++.++|++++++ +++.+.+......... .+.+.+.++...+ ...+++++
T Consensus 284 ~~~~~-~D~~~~s~hK~~-~~p~g~G~l~~~~-------~~~~~~l~~~~~g~~~~~~~~~~~aal~~l---~~~~~~~~ 351 (456)
T 2z67_A 284 AFKYR-VDAVVSSSDKNL-LTPIGGGLVYSTD-------AEFIKEISLSYPGRASATPVVNTLVSLLSM---GSKNYLEL 351 (456)
T ss_dssp HHTSC-CSEEEEEHHHHH-CCCSSCEEEEESC-------HHHHHHHHTTSCSCBCSHHHHHHHHHHHHH---HHHHHHHH
T ss_pred hhCCC-CCEEEEcCCCCc-CCCCCeEEEEEcC-------HHHHhhcCcCCCCCCCCCHHHHHHHHHHHH---HHHHHHHH
Confidence 12111 125678999984 4558899999953 3455655433222111 1223333333333 34677888
Q ss_pred HHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCe---eEE------eCCC
Q 014631 318 VDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESV---IVL------PGMA 385 (421)
Q Consensus 318 ~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv---~v~------~g~~ 385 (421)
.++..++++++.+.|++++ |+. +..|. .++++.+... + ...++...| .++|+ -+. +|..
T Consensus 352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~---~--~~~~l~~~L-~~~gi~~~rv~~~~g~f~G~~ 422 (456)
T 2z67_A 352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVN---S--DPVEIAAKL-YNLRVTGPRGIKKTDHFGNCY 422 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECS---S--CHHHHHHHH-HHTTEESCEEECTTCHHHHTC
T ss_pred HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEecc---c--HHHHHHHHH-HHcCCCcceEEeecCcccccc
Confidence 9999999999999999875 766 43555 4555555211 0 134566655 45565 343 1333
Q ss_pred CC--CCCeEEEEec--CCHHHHHHHHHHHHHHH
Q 014631 386 VG--MKNWLRITFA--IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 386 ~~--~~~~iRi~~~--~~~e~l~~~~~~l~~~~ 414 (421)
|. ..+++|++++ ++++++++++++|++++
T Consensus 423 ~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 423 LGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp SSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 32 2478999998 79999999999998754
No 211
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=2.2e-24 Score=212.00 Aligned_cols=340 Identities=11% Similarity=0.036 Sum_probs=218.3
Q ss_pred CcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhc-------C-CC
Q 014631 62 TTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLA-------R-PG 133 (421)
Q Consensus 62 ~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~-------~-~g 133 (421)
.+..+...+.....+.....|...++..++++.+.+++.+.+|.+ ++++++|+|+|+|+..++.++. + +|
T Consensus 120 ~~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G 197 (515)
T 2jis_A 120 DPHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRG 197 (515)
T ss_dssp CHHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHC
T ss_pred CHHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcC
Confidence 344444333223323333356555566677887777777776643 7899999999999988887763 2 57
Q ss_pred C------eEEEcCCCCcchHHHHhhcCc---eeEeeeccCCCCccCCHHHHHhhhcc------CceEEEEeCCCCCcccc
Q 014631 134 A------NILLPKPGFPLYEANARHTRL---EIRHFDLLPEKGWEVDLDGLEALADE------NTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 134 d------~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~~i~~~~p~nptG~~ 198 (421)
| .|+++.++|+++...+...|. +++.+|.+ .++.+|+++|++.+++ ++++|++++|+|+||.+
T Consensus 198 ~~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i 275 (515)
T 2jis_A 198 LRTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAF 275 (515)
T ss_dssp GGGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCB
T ss_pred ccccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCc
Confidence 5 899999999999999998888 78888864 3567999999998865 47888999999999999
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE 277 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 277 (421)
. ++++|+++|+++|+++|+|++|+.+.+....+. .+..+. ...+++.|+||+++.| .++|+++++++......
T Consensus 276 ~---~l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~~~~~ 349 (515)
T 2jis_A 276 D---PLEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTSNLLKR 349 (515)
T ss_dssp C---CHHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCSCHHHH
T ss_pred c---CHHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChHHHHHH
Confidence 4 488999999999999999999998765432221 122221 1227778999997644 57999999764111100
Q ss_pred H-H-HHHHHhhh-c------cc-c------cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcccc
Q 014631 278 L-R-IVDSIKGY-L------NI-S------SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCP 341 (421)
Q Consensus 278 ~-~-~~~~~~~~-~------~~-~------~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~ 341 (421)
. . ....+... . .. . .....+.+.++..++. ..++++..++..++++++.+.|+++|++.++
T Consensus 350 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~g~~~~ 426 (515)
T 2jis_A 350 CHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKREGFELV 426 (515)
T ss_dssp HHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTSTTEEES
T ss_pred HhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEe
Confidence 0 0 00011000 0 00 0 0011233334333442 4668888899999999999999999898855
Q ss_pred CCCCceeEEEEecCcccccC---CCCh-H-------HHHHHHHhhcCeeEEeCCC-CCCCCeEEEEe-c--CCHHHHHHH
Q 014631 342 RKPEGSMFVMVKLNLSLLEG---ISDD-M-------EFALQLAKEESVIVLPGMA-VGMKNWLRITF-A--IEPSALEEG 406 (421)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~---~~~~-~-------~~~~~ll~~~gv~v~~g~~-~~~~~~iRi~~-~--~~~e~l~~~ 406 (421)
..|..+.+.+...+.. ..+ ..+- . .+... +.+.|+.+..... .+..+++|+++ + +++++++++
T Consensus 427 ~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~-l~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edid~~ 504 (515)
T 2jis_A 427 MEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKER-MVKEGSMMIGYQPHGTRGNFFRVVVANSALTCADMDFL 504 (515)
T ss_dssp SCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHH-HHHHTSCEEEEEEETTEEEEEEEECCCTTCCHHHHHHH
T ss_pred CCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHH-HHhcCCEEEEEEEECCceEEEEEEeCCCCCCHHHHHHH
Confidence 4454444443222321 000 0010 1 13333 4456865532111 12246899999 4 789999999
Q ss_pred HHHHHHHHHH
Q 014631 407 LGRIKAFCQR 416 (421)
Q Consensus 407 ~~~l~~~~~~ 416 (421)
++.|++++++
T Consensus 505 ~~~l~~~~~~ 514 (515)
T 2jis_A 505 LNELERLGQD 514 (515)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHhh
Confidence 9999988654
No 212
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.94 E-value=2.3e-25 Score=212.05 Aligned_cols=284 Identities=11% Similarity=0.082 Sum_probs=188.6
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeec
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDL 162 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~ 162 (421)
...++|+.+|++++ . +++++++||++|++.++.+++++||+|+++.+.|.+....+ +..|+++..++.
T Consensus 83 ~~~~le~~lA~l~g------~--~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 83 THFSLQQAMCELEG------G--AGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHHHT------C--SEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred hHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 35689999999873 2 35677788999999999999999999999999999876543 457888888764
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCccccccc
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVF 240 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~ 240 (421)
+ |++++++++++++++|++.+|+||||.+++ +++|+++|++ +|+++|+|++|+.... . .++ .+
T Consensus 155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~-~---~p~-~~ 219 (415)
T 2fq6_A 155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVL-F---KAL-DF 219 (415)
T ss_dssp T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTS-S---CGG-GG
T ss_pred C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCccccc-C---Ccc-cc
Confidence 2 789999999989999999999999999975 7899999999 9999999999986431 1 122 22
Q ss_pred CCCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 241 GSTVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 241 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
+. .+++.|+||.++.+|.+ +||+++++. +++.+..... .....++.....+...++ .+..+.
T Consensus 220 g~---Div~~S~sK~lg~~g~~~~G~l~~~~~--------~~~~l~~~~~~~G~~~~~~~a~~~~~~l~-----~l~~r~ 283 (415)
T 2fq6_A 220 GI---DVSIQAATKYLVGHSDAMIGTAVCNAR--------CWEQLRENAYLMGQMVDADTAYITSRGLR-----TLGVRL 283 (415)
T ss_dssp TC---SEEEEETTTTTTCSSSCCCEEEEECTT--------THHHHHHHHHHTTCCCCHHHHHHHHHHHH-----HHHHHH
T ss_pred CC---eEEEEeCccccCCCCCceEEEEEeCHH--------HHHHHHHHHHhcCCCCCHHHHHHHHhhhh-----HHHHHH
Confidence 22 38899999999888765 588887532 2333433322 122334444443333332 345556
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCC----------------CceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKP----------------EGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
++..++...+.+.|++.|.+..+..| ..+..+++.++... +..+...++.. ++..++.+..
T Consensus 284 ~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~--~~~~~~~~l~~-l~~~~~a~s~ 360 (415)
T 2fq6_A 284 RQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKL--NNEELANYLDN-FSLFSMAYSW 360 (415)
T ss_dssp HHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCC--CHHHHHHHHTT-CSSCEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCC--CHHHHHHHHHh-CCcCeEeccC
Confidence 66677788888888876544311111 13456777776310 00012233322 2333444444
Q ss_pred CCC--------------------CCC-CCeEEEEec--CCHHHHHHHHHHHHH
Q 014631 383 GMA--------------------VGM-KNWLRITFA--IEPSALEEGLGRIKA 412 (421)
Q Consensus 383 g~~--------------------~~~-~~~iRi~~~--~~~e~l~~~~~~l~~ 412 (421)
|+. .+. ++.+|+|++ +++|+++.+.++|++
T Consensus 361 G~~~s~~~~~~p~~~s~~~~~~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~ 413 (415)
T 2fq6_A 361 GGYESLILANQPEHIAAIRPQGEIDFSGTLIRLHIGLEDVDDLIADLDAGFAR 413 (415)
T ss_dssp CSSSCEEEEECHHHHHTTCTTCCCCCCSCEEEEECCSSCHHHHHHHHHHHHHT
T ss_pred CCCceeEEecCCCccccccchhhcCCCCCEEEEEecCCCHHHHHHHHHHHHHh
Confidence 421 122 468999999 556666666666653
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.94 E-value=2e-25 Score=216.73 Aligned_cols=343 Identities=12% Similarity=0.037 Sum_probs=230.1
Q ss_pred cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCC-------CcEEEcCCHHHHHHHHHHHhcC----
Q 014631 63 TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSP-------DDVYLTAGCKQAIQVILTVLAR---- 131 (421)
Q Consensus 63 ~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~-------~~i~~~~g~~~al~~~~~~l~~---- 131 (421)
+..+.+.+...++. +...|....+..++++.+++|+.+.+|.+... ...++|+|||+++..++.+..+
T Consensus 87 ~~~~~~~l~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~ 165 (475)
T 3k40_A 87 PAIVADMLSGAIAC-IGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLK 165 (475)
T ss_dssp HHHHHHHHHHHHCC-CSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-cccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHH
Confidence 34555556666554 34467777778899999999999988865321 3688999999998877765421
Q ss_pred ---------------CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC------ceEEEEeC
Q 014631 132 ---------------PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN------TVAMVIVN 190 (421)
Q Consensus 132 ---------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~------~~~i~~~~ 190 (421)
+++.|+++.++|+++...+...|++++.++++ .++ +|+++|++.+.++ +.+++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~ 242 (475)
T 3k40_A 166 EVKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTL 242 (475)
T ss_dssp HHHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEB
T ss_pred HhhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEe
Confidence 34689999999999999999999999999875 346 9999999988654 55678889
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcc-cccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYV-RMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
++|+||.+ +++++|+++|++||+++++|++|+...+...... .+..+.. -..+..++||+++.| ..+|+++++
T Consensus 243 ~~t~~G~~---~~l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~~--~Ds~~~~~hK~l~~p-~g~g~l~~~ 316 (475)
T 3k40_A 243 GTTNSCAF---DYLDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIES--ADSFNFNPHKWMLVN-FDCSAMWLK 316 (475)
T ss_dssp SCTTTCCB---CCHHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEES
T ss_pred cCCCCcCc---CCHHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCccc--CCEEEECchhccCCC-CceEEEEEe
Confidence 99999998 6799999999999999999999987543221111 1111111 125567899986543 558999887
Q ss_pred CCCcchhHHHH-HHHHhhh--------cccc-cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 270 DPSGILQELRI-VDSIKGY--------LNIS-SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 270 ~~~~~~~~~~~-~~~~~~~--------~~~~-~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
++....+.-.. ...+... .... .+.-......+..++......+++++.++..++++++.+.|+++|++.
T Consensus 317 ~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~~ 396 (475)
T 3k40_A 317 DPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRFE 396 (475)
T ss_dssp SGGGC---------------------------CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEE
T ss_pred CHHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCEE
Confidence 64321100000 0000000 0000 011011122223333332356788889999999999999999999998
Q ss_pred ccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec---CCHHHHHHHHHHHHHHHHH
Q 014631 340 CPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA---IEPSALEEGLGRIKAFCQR 416 (421)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~---~~~e~l~~~~~~l~~~~~~ 416 (421)
++ .+.....+++.++... ....++..++.++.++.+.|+...+ ..++|++++ +++++|++++++|+++.++
T Consensus 397 l~-~~~~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~~~ 470 (475)
T 3k40_A 397 LA-AEINMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAADE 470 (475)
T ss_dssp ES-SCCBTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred Ee-cCCceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 54 4444556666664311 0245677776655445555554333 568999986 4789999999999999988
Q ss_pred hhhcC
Q 014631 417 HAKQQ 421 (421)
Q Consensus 417 ~~~~~ 421 (421)
+.+.+
T Consensus 471 ~~~~~ 475 (475)
T 3k40_A 471 MEQEQ 475 (475)
T ss_dssp HHTCC
T ss_pred HhccC
Confidence 76643
No 214
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.94 E-value=3.2e-26 Score=220.75 Aligned_cols=291 Identities=10% Similarity=0.059 Sum_probs=192.7
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
+...+.++++.+++ ++ .+ +++++|+|+++++..++.+++++||+|+++.++|.++...+...|+++++++..
T Consensus 55 ~~~~~~~~~~~la~-~g------~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~ 126 (446)
T 2x3l_A 55 PEEVILKSMKQVEK-HS------DY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIETH 126 (446)
T ss_dssp CSSHHHHHHHHHCS-CT------TE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEEE
T ss_pred cchHHHHHHHHHHh-cC------CC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeCe
Confidence 44445677777776 53 33 689999999999999999999999999999999999999999999999998873
Q ss_pred CCCC----ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc-cccCCCCccccc
Q 014631 164 PEKG----WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH-LTFGSTPYVRMG 238 (421)
Q Consensus 164 ~~~~----~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~ 238 (421)
.+++ +.+|++++ +.++++++++++ .|++|.+++ +++|+++|++||+++|+||+|+. +.|.+. .....
T Consensus 127 ~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~ 198 (446)
T 2x3l_A 127 QSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTL 198 (446)
T ss_dssp ECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGG
T ss_pred eccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChH
Confidence 2333 56788887 456788999999 455999976 78999999999999999999987 334443 22332
Q ss_pred ccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 239 VFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 239 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
..+.+ +++.|+||++ .++.++||+++++.. .+...+...... ...++++.....++..+++.......++..
T Consensus 199 ~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~~--i~~~~~~~~~~~--~~~~s~~~~~~aal~~a~~~l~~~g~~~~~ 270 (446)
T 2x3l_A 199 NYQAD---YVVQSFHKTL-PALTMGSVLYIHKNA--PYRENIIEYLSY--FQTSSPSYLIMASLESAAQFYKTYDSTLFF 270 (446)
T ss_dssp GGTCS---EEEECHHHHS-SSCTTCEEEEEETTC--TTHHHHHHHHHH--HSCSSCCHHHHHHHHHHHHHHHHCCCHHHH
T ss_pred HcCCC---EEEECCcccc-ccccccEEEEEcCCc--CCHHHHHHHHHH--HcCCCchHHHHHHHHHHHHHHHHhCHHHHH
Confidence 33332 8889999963 333458999997532 111112111111 122355555544444444321111122245
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEE-eCCCCCCCCeEEEEec
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVL-PGMAVGMKNWLRITFA 397 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~iRi~~~ 397 (421)
++.+++.+++++. ++.+. .+.++.++|+.++. .+..++...| .++||.+. +|. +++|++++
T Consensus 271 ~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L-~~~GI~v~~~g~-----~~iRi~~~ 332 (446)
T 2x3l_A 271 AKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWF-MNAHIYLELADD-----YQALAILP 332 (446)
T ss_dssp HHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHH-HHTTEEESEECS-----SCEEEECC
T ss_pred HHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHH-HHCCCEEEecCC-----CEEEEEee
Confidence 5555666666655 55523 34444578887751 1456666665 45599997 543 68999998
Q ss_pred --CCHHHHHHHHHHHHHHHHHh
Q 014631 398 --IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 398 --~~~e~l~~~~~~l~~~~~~~ 417 (421)
++++++ +++++|+++++++
T Consensus 333 ~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 333 LWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp CCCTTCCC-CHHHHHHHHHTCC
T ss_pred cCCCHHHH-HHHHHHHHHHHhh
Confidence 588999 9999999987655
No 215
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.89 E-value=1.7e-28 Score=235.39 Aligned_cols=336 Identities=13% Similarity=0.064 Sum_probs=223.7
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
.|.++|||..|......+ ..+|.+.+++.+++.+.....| +.....+|.+.+++++ + ..+.+++++||++|
T Consensus 98 dG~~yiD~~~~~~~~~lG-h~~p~V~~Av~~q~~~~~~~~~-~~~~~~~Lae~L~~~~------p-~~~~v~~~nSGseA 168 (465)
T 2yky_A 98 DGHAYVNFLGEYTAGLFG-HSHPVIRAAVERALAVGLNLST-QTENEALFAEAVCDRF------P-SIDLVRFTNSGTEA 168 (465)
Confidence 488999998887432222 4678999999999887433334 3344567777777776 2 35789999999999
Q ss_pred HHHHHHHhc--CCCCeEEEcCCCCcchHHHHh----hcCc--eeEeeeccCCCCccCCHHHHHhhhc---cCceEEEEeC
Q 014631 122 IQVILTVLA--RPGANILLPKPGFPLYEANAR----HTRL--EIRHFDLLPEKGWEVDLDGLEALAD---ENTVAMVIVN 190 (421)
Q Consensus 122 l~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~----~~g~--~~~~~~~~~~~~~~~d~e~l~~~~~---~~~~~i~~~~ 190 (421)
+..+++... ..+++|++.+++|+++...+. ..|. .+..++. -|++++++.++ +++++|++..
T Consensus 169 ~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~-------~d~~~l~~~l~~~~~~~aavi~ep 241 (465)
T 2yky_A 169 NLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVY-------NDVEGTADLLKRHGHDCAAILVEP 241 (465)
Confidence 999998753 244899999999998755443 1222 1222221 27888888886 4566665443
Q ss_pred CCCCccccc-CHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 191 PGNPCGNVF-TYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 191 p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
.++++|.+. +++.+++|.++|++||+++|+||+|+ +. .|.. .....++. ...+.||||.++. |+|+||++++
T Consensus 242 v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r-~g~~-~a~~~~gv---~pDi~t~sK~lg~-G~piG~v~~~ 314 (465)
T 2yky_A 242 MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SR-LSGG-GAQEMLGI---SADLTTLGKYIGG-GMSFGAFGGR 314 (465)
Confidence 366699654 67889999999999999999999999 63 3321 12222221 1234589999875 8999999986
Q ss_pred CCCcchhHHHHHHHHhh------hcccccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCC---Cccc
Q 014631 270 DPSGILQELRIVDSIKG------YLNISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIP---CITC 340 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---g~~~ 340 (421)
. ++++.+.. ....+.+.|+++++++.++|+...+ +...++++++.+++.+.|+++. ++.
T Consensus 315 ~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 382 (465)
T 2yky_A 315 R--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAP- 382 (465)
Confidence 3 56666655 1223457888999998888875322 2345556666666666665431 221
Q ss_pred cCCCCceeEEEEecCccccc--------CCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Q 014631 341 PRKPEGSMFVMVKLNLSLLE--------GISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKA 412 (421)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~ 412 (421)
...+..|.++|+.+...... +......++..+ .++||++.|+. +.. +++..+++++++++++|.+
T Consensus 383 ~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~ 455 (465)
T 2yky_A 383 LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHM-LRKGIYLAPRG-MYA-----LSLEIADAGRDAFAEALAD 455 (465)
Confidence 11345577888877531100 000134566555 46799999875 221 6667899999999999999
Q ss_pred HHHHhhh
Q 014631 413 FCQRHAK 419 (421)
Q Consensus 413 ~~~~~~~ 419 (421)
+++++++
T Consensus 456 ~l~~~~~ 462 (465)
T 2yky_A 456 FIGEQRA 462 (465)
Confidence 9987654
No 216
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.93 E-value=1.2e-23 Score=199.87 Aligned_cols=307 Identities=14% Similarity=0.112 Sum_probs=208.9
Q ss_pred CCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHh-------cCCC
Q 014631 61 RTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVL-------ARPG 133 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l-------~~~g 133 (421)
..++.+.+++.+.+... .|.+..+..++|+.++++++ . ++++++++|++++..++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTFG------S--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHHT------C--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHHC------C--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 46788899999988762 35566678899999999984 2 26777888889999999998 7899
Q ss_pred CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHh
Q 014631 134 ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARK 213 (421)
Q Consensus 134 d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~ 213 (421)
|+|+++.++|+++...+...|++++.++++++ ++.+|++++++.++++++++++++ ++|.. .++++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~---~~~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNP---NNFDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCC---CCHHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccCh---hhHHHHHHHHHH
Confidence 99999999999999999999999999988653 467999999999988888888874 55665 569999999999
Q ss_pred cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcc--cccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc--
Q 014631 214 LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGS--MSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-- 289 (421)
Q Consensus 214 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-- 289 (421)
+|+++|+|++|+.+.... ...++.... +...| .+|.++ +| +.|++++++ +++.+.+.....
T Consensus 154 ~~~~li~D~a~~~g~~~~-----~~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~-------~~l~~~~~~~~~~g 218 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFN-----NKCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDD-------EEIYHILLCIRAHG 218 (390)
T ss_dssp SCCEEEEECTTCTTCEET-----TEETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESC-------HHHHHHHHHHTBTT
T ss_pred cCCEEEEECcCcccCEEC-----Ccccccccc-eEEEEccCCCCCc-cC-CceEEEeCC-------HHHHHHHHHHHhcC
Confidence 999999999998532111 112222111 22222 245532 23 348888853 234333322110
Q ss_pred ------------------------------cccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCcc
Q 014631 290 ------------------------------ISSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCIT 339 (421)
Q Consensus 290 ------------------------------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~ 339 (421)
.....+.+...++...+ +++++..++.+++++++.+.|+++|++.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~~ 293 (390)
T 3b8x_A 219 WTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYLD 293 (390)
T ss_dssp BSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSEE
T ss_pred CCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCcc
Confidence 00113334443333333 3467788888899999999999988887
Q ss_pred ccCCC--Ccee-EEEEecCcccccCCCChHHHHHHHHhhcCeeEEeC---CCCCC----------------------CCe
Q 014631 340 CPRKP--EGSM-FVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPG---MAVGM----------------------KNW 391 (421)
Q Consensus 340 ~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g---~~~~~----------------------~~~ 391 (421)
+. .+ ..++ .+++.++... ..+..++...| .++||.+.++ ..+.. ...
T Consensus 294 ~~-~~~~~~~~~~~~i~~~~~~---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
T 3b8x_A 294 VQ-QETGESSWFGFSFIIKKDS---GVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG 368 (390)
T ss_dssp EC-CCCSBCCCCEEEEEECTTS---CCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred cC-CCCCCcccEEEEEEecCcC---cccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence 33 32 1222 2455554210 11355566555 6789999873 21111 135
Q ss_pred EEEEec--CCHHHHHHHHHHH
Q 014631 392 LRITFA--IEPSALEEGLGRI 410 (421)
Q Consensus 392 iRi~~~--~~~e~l~~~~~~l 410 (421)
+|++++ ++++|++++++.|
T Consensus 369 l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHhh
Confidence 999987 7899999999876
No 217
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.93 E-value=5.4e-24 Score=201.90 Aligned_cols=283 Identities=16% Similarity=0.131 Sum_probs=193.7
Q ss_pred CCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh-----hcCceeEeee
Q 014631 87 GILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR-----HTRLEIRHFD 161 (421)
Q Consensus 87 g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~-----~~g~~~~~~~ 161 (421)
...+|++.++++.+ .+..+++++|++|+.. +..++++||+|+++++.|.+....+. ..|.+++.++
T Consensus 68 ~~~~l~~~la~l~g--------~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 68 TRFAYERCVAALEG--------GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHHT--------CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHhC--------CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 34688888888873 2367777778999998 45678999999999999996655543 3588888876
Q ss_pred ccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccC
Q 014631 162 LLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 162 ~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 241 (421)
.+ |++++++.+++++++|++++|+||||.+++ +++|+++|++||+++|+|++|+...+. .++ .++
T Consensus 139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g 203 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQ----RPL-SLG 203 (400)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CGG-GGT
T ss_pred CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccC----Chh-hcC
Confidence 52 789999999989999999999999999975 899999999999999999999864321 111 122
Q ss_pred CCCCEEEEcccccccCCCCceEEE--EEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHHHHHH
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGW--LVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFFSKIV 318 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 318 (421)
..+++.|+||.++.+|.++|. +++.+ +++.+.+..... ...+.++..+..+...++. +..+.
T Consensus 204 ---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~ 268 (400)
T 3nmy_A 204 ---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM 268 (400)
T ss_dssp ---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred ---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence 238899999999888888766 44432 346666655443 2345666666665555543 45566
Q ss_pred HHHHHHHHHHHHHhhcCCCccccCCCC----------------ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEe
Q 014631 319 DILRDTADICYDRIKEIPCITCPRKPE----------------GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLP 382 (421)
Q Consensus 319 ~~~~~~~~~~~~~l~~~~g~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 382 (421)
++..++...+.+.|++.|.+..+..|. .|.+++++++... .....++.. ++-.++.+..
T Consensus 269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~-l~~~~~~~s~ 343 (400)
T 3nmy_A 269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEK-TELFTLAESL 343 (400)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHH-CSSSEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHc-CCcceEecCC
Confidence 777888889999999887765333332 3567888886310 012233333 2333444444
Q ss_pred CCCCC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHH
Q 014631 383 GMAVG-----------------------MKNWLRITFAIEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 383 g~~~~-----------------------~~~~iRi~~~~~~e~l~~~~~~l~~~~~ 415 (421)
|..+. .++.+|+|++.. +.+.+++.|.++++
T Consensus 344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~ 397 (400)
T 3nmy_A 344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV 397 (400)
T ss_dssp CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 43221 146899999842 33445566666664
No 218
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=2.4e-24 Score=207.70 Aligned_cols=324 Identities=19% Similarity=0.192 Sum_probs=199.8
Q ss_pred eeeccCCCCCCCCCCCCcHHHHHHH--HHHHhcCCCCCCCC--CCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHH
Q 014631 46 IIPLGHGDPSAFPCFRTTPVAADAV--VDAVRSAEFDCYSP--SVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQA 121 (421)
Q Consensus 46 ~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~~~~~y~~--~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~a 121 (421)
...++.|.+. .+.|+.+.+.+ .+.... .+.|.+ .+|..++.+.+.+++.+.+| .+++++++++|++.+
T Consensus 66 ~~~~~~g~~~----~~~p~~v~~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~~la~~~g--~~~~~i~~~~g~taa 137 (438)
T 1wyu_A 66 KAFLGGGVRS----HHVPPVVQALAARGEFLTA--YTPYQPEVSQGVLQATFEYQTMIAELAG--LEIANASMYDGATAL 137 (438)
T ss_dssp TCCCCSSCCC----CCCCHHHHHHHTSHHHHHC--CSCCSGGGCHHHHHHHHHHHHHHHHHHT--SSEECSCBSSHHHHH
T ss_pred ccccCCCccC----CcCcHHHHHHHhcchhhhc--CCCCcchhhhhHHHHHHHHHHHHHHHhC--CCccceEEeCcHHHH
Confidence 3456666543 35566664444 222222 122321 33433333444444443333 456788999999944
Q ss_pred HHHHHHH-hcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcc
Q 014631 122 IQVILTV-LARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196 (421)
Q Consensus 122 l~~~~~~-l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG 196 (421)
++.+..+ ..++||+|+++.++|+++...+ +..|++++.++. . ++.+|+++ +++++++|++++| ||||
T Consensus 138 ~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~-~--~~~~d~~~----i~~~t~~v~i~~p-n~tG 209 (438)
T 1wyu_A 138 AEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL-E--GGRTPLPE----VGEEVGAVVVQNP-NFLG 209 (438)
T ss_dssp HHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-B--TTBCCCCC----CCTTEEEEEEESS-CTTS
T ss_pred HHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-c--CCccCHHH----hCCCeEEEEEECC-CCCe
Confidence 3333322 2478999999999999887554 458999998885 2 34577776 5678999999999 9999
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEEccc-ccccccCCCCcccccccCCCCCEEEEcccccccC----CCCceEEEEEeeCC
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVISDEV-YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWI----VPGWRLGWLVTSDP 271 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~ 271 (421)
.+. ++++|.++|+++|+++|+|.. ++...+ .. + ..++.+ +++.| +|.|+ +.|.++||+++++.
T Consensus 210 ~~~---~l~~i~~la~~~g~~vivd~d~~a~g~~---~~-~-~~~g~D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~ 277 (438)
T 1wyu_A 210 ALE---DLGPFAEAAHGAGALFVAVADPLSLGVL---KP-P-GAYGAD---IAVGD-GQSLGLPMGFGGPHFGFLATKKA 277 (438)
T ss_dssp BCC---CHHHHHHHHHHTTCEEEEECCTTGGGTB---CC-H-HHHTCS---EEEEE-CTTTTCCCGGGCSCCEEEEECGG
T ss_pred EEe---cHHHHHHHHHHcCCEEEEEechhhccCc---CC-C-ccCCCC---EEEEC-CcccCCCccCCCCCeeEEEEcHH
Confidence 996 588999999999999996632 221111 11 1 222222 55656 55544 45668999998642
Q ss_pred CcchhHHHHHHHHhhh-------------------------cccccCC-----chHHHHHHHHHhhccchhHHHHHHHHH
Q 014631 272 SGILQELRIVDSIKGY-------------------------LNISSGP-----ATFVQGAVPQIFKNTKEDFFSKIVDIL 321 (421)
Q Consensus 272 ~~~~~~~~~~~~~~~~-------------------------~~~~~~~-----~~~~~~~~~~~l~~~~~~~~~~~~~~~ 321 (421)
+.+.+... .....++ +.+...++..++......+++++.+++
T Consensus 278 --------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~ 349 (438)
T 1wyu_A 278 --------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKAKSNITTNAQLTALMGAMYLAALGPEGLREVALKS 349 (438)
T ss_dssp --------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGSSCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------HHHhCCCceeccccccCCCcceeeeccccccccchhcccCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 22222100 0001111 222222222224322345688889999
Q ss_pred HHHHHHHHHHhhcCCCccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCeeE--EeCCCCCCCCeEEEEec--
Q 014631 322 RDTADICYDRIKEIPCITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIV--LPGMAVGMKNWLRITFA-- 397 (421)
Q Consensus 322 ~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v--~~g~~~~~~~~iRi~~~-- 397 (421)
+++++++.+.|+++||+.+. .+. .++.++.+... .+..++..+|. ++||.+ .++..|. ++++|+|++
T Consensus 350 ~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-----~~~~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~ 420 (438)
T 1wyu_A 350 VEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-----KDPEAVRRALA-ERGFHGATPVPREYG-ENLALFAATEL 420 (438)
T ss_dssp HHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-----SCHHHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTT
T ss_pred HHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-----CCHHHHHHHHH-HCCceeccccccccC-CCeEEEEeccc
Confidence 99999999999999898843 443 33433333211 14667777765 569998 6676554 689999998
Q ss_pred CCHHHHHHHHHHHHHHH
Q 014631 398 IEPSALEEGLGRIKAFC 414 (421)
Q Consensus 398 ~~~e~l~~~~~~l~~~~ 414 (421)
++++++++++++|++++
T Consensus 421 ~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 421 HEEEDLLALREALKEVL 437 (438)
T ss_dssp CCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHh
Confidence 78999999999998764
No 219
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=1.7e-23 Score=200.36 Aligned_cols=289 Identities=18% Similarity=0.139 Sum_probs=190.8
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEee-ec
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHF-DL 162 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~-~~ 162 (421)
..++++.++++++ .. ..+++++|++|++.++.+++++||+|+++.++|+++...+ ...|++++.+ +.
T Consensus 60 ~~~l~~~la~~~g------~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 131 (421)
T 2ctz_A 60 VDVLEKRLAALEG------GK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSRE 131 (421)
T ss_dssp HHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTT
T ss_pred HHHHHHHHHHHhC------CC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCC
Confidence 5789999999984 22 3355555699999999998899999999999999876665 6789988887 54
Q ss_pred cCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccC
Q 014631 163 LPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFG 241 (421)
Q Consensus 163 ~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~ 241 (421)
+ |++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++| +.. +.+. ++ ..+
T Consensus 132 ~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~~ 196 (421)
T 2ctz_A 132 E-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AWG 196 (421)
T ss_dssp C-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GGT
T ss_pred C-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-ccC
Confidence 2 789999999889999999999999999977 889999999999999999999 543 3222 12 222
Q ss_pred CCCCEEEEcccccccCCCCceEEEEEeeCCC-cc-hh-HHHHH---------------------HHHh--hhcccccCCc
Q 014631 242 STVPVITLGSMSKRWIVPGWRLGWLVTSDPS-GI-LQ-ELRIV---------------------DSIK--GYLNISSGPA 295 (421)
Q Consensus 242 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-~~-~~-~~~~~---------------------~~~~--~~~~~~~~~~ 295 (421)
. .+++.|+||.++.+|.|+|++++.+.. .+ .. ...+. ...+ .........+
T Consensus 197 ~---Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~ 273 (421)
T 2ctz_A 197 A---ALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQALG 273 (421)
T ss_dssp C---SEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCCC
T ss_pred C---eEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCCC
Confidence 2 388889999999999999998886311 11 00 00111 0000 0011112345
Q ss_pred hHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCC-----------------CceeEEEEecCccc
Q 014631 296 TFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKP-----------------EGSMFVMVKLNLSL 358 (421)
Q Consensus 296 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~-----------------~~~~~~~~~~~~~~ 358 (421)
++...++...++. +..+.++..++.+++.+.|+++|++..+..| ..+..+.+.++...
T Consensus 274 ~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~~ 348 (421)
T 2ctz_A 274 PFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGGY 348 (421)
T ss_dssp HHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTHH
T ss_pred HHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCCH
Confidence 5554444444432 4455566668899999999998887643222 22445666665210
Q ss_pred ccCCCChHHHHHHHHhhcCeeEEeCCCC----------------------CC-CCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 359 LEGISDDMEFALQLAKEESVIVLPGMAV----------------------GM-KNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 359 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------------------~~-~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
.....++..+ +..++.+..|... +. ++.+|+|++. |+++.+++.|.+++
T Consensus 349 ----~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~al 420 (421)
T 2ctz_A 349 ----EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEAL 420 (421)
T ss_dssp ----HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred ----HHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence 0122233222 3334444444211 11 3789999874 47777777777764
No 220
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.93 E-value=3.6e-24 Score=199.71 Aligned_cols=326 Identities=11% Similarity=0.060 Sum_probs=223.8
Q ss_pred CCCcHHHHHHHHHHHhcCCCC---CCC-CC------CCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-cCCHHHHHHHHHH
Q 014631 60 FRTTPVAADAVVDAVRSAEFD---CYS-PS------VGILPARRAIADYLNSELPCKLSP-DDVYL-TAGCKQAIQVILT 127 (421)
Q Consensus 60 ~~~~~~v~~a~~~~~~~~~~~---~y~-~~------~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~-~~g~~~al~~~~~ 127 (421)
.+.|++|.+++.+.+.+...+ .+. .. .-+.+.|+.++++++ +++ ++|+| |+|+|++++.++.
T Consensus 22 ~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll~------~~~~~evif~t~~~T~a~n~a~~ 95 (377)
T 3e77_A 22 SMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELLA------VPDNYKVIFLQGGGCGQFSAVPL 95 (377)
T ss_dssp CCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHHT------CCTTEEEEEESSHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCCeEEEEcCchHHHHHHHHH
Confidence 588999999999987632110 000 11 124677788888873 433 57888 5899999999999
Q ss_pred HhcCC--CCeEEEcCCCCcch--HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHH
Q 014631 128 VLARP--GANILLPKPGFPLY--EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQ 203 (421)
Q Consensus 128 ~l~~~--gd~Vl~~~p~y~~~--~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~ 203 (421)
.+..+ ||+|++...++.+. ...++..|..+..++.+. ++..++++++..++++++.|.+++..|.||++.|.
T Consensus 96 ~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~~--~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-- 171 (377)
T 3e77_A 96 NLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKLG--SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-- 171 (377)
T ss_dssp HHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCCS--SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS--
T ss_pred hccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccCC--CcCCCCChHHhccCCCccEEEEeCccCchheEchh--
Confidence 98765 89998877766543 455667787777766543 34467778777888899999999888899999875
Q ss_pred HHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcch---hHHHH
Q 014631 204 LQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGIL---QELRI 280 (421)
Q Consensus 204 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~~ 280 (421)
+|+++|+++++|.+++. |....++..++ +++.|.+|++|.+| +|++++++..... ..+.+
T Consensus 172 ------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~~ 234 (377)
T 3e77_A 172 ------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPSV 234 (377)
T ss_dssp ------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCGG
T ss_pred ------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCch
Confidence 36789999999999987 44444555443 46678999998778 6888887532100 00011
Q ss_pred H--HHHhhhcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCC--ceeEEEEec
Q 014631 281 V--DSIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCP-RKPE--GSMFVMVKL 354 (421)
Q Consensus 281 ~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~-~~~~--~~~~~~~~~ 354 (421)
. ..........++++....+++.++++...+. +++.+.++.+++.+++++.|+++||+... ..+. .+..+.+.+
T Consensus 235 ~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~~ 314 (377)
T 3e77_A 235 LEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFRI 314 (377)
T ss_dssp GCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEEE
T ss_pred hhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEEc
Confidence 1 1111111234578888888888888764455 79999999999999999999999887721 1111 123355555
Q ss_pred CcccccCCCC-hHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 355 NLSLLEGISD-DMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 355 ~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
+... ...+ +..++..+ .++||.+.+|.. ..+.+|+|+. ++++|++++++.|++++++.
T Consensus 315 ~~~~--~~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 315 GNAK--GDDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp SSTT--CCHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCCC--CchhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 5310 0000 12455544 568999988863 2467999998 78999999999999998764
No 221
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.92 E-value=2e-23 Score=194.06 Aligned_cols=322 Identities=14% Similarity=0.088 Sum_probs=221.1
Q ss_pred CCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCC---CC-CC------CCCHHHHHHHHHHHhhhCCCCCC-CCcE
Q 014631 44 RPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDC---YS-PS------VGILPARRAIADYLNSELPCKLS-PDDV 112 (421)
Q Consensus 44 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---y~-~~------~g~~~l~~~ia~~l~~~~~~~~~-~~~i 112 (421)
.++++|+-|. + +.|++|.+++.+.+.+...+. |. .. ..+.+.|+.++++++ ++ +.+|
T Consensus 4 ~~~~~f~pgp-t-----~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll~------~~~~~~v 71 (361)
T 3m5u_A 4 MRKINFSAGP-S-----TLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLYE------LNDDYEV 71 (361)
T ss_dssp CCCEECCSSS-C-----CCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHHT------CCTTEEE
T ss_pred cceEeecCCC-C-----CCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceE
Confidence 4667888774 3 678999999998875311100 10 11 225677788888873 43 4578
Q ss_pred EE-cCCHHHHHHHHHHHhcCCCCeEEEcCCCCc--chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631 113 YL-TAGCKQAIQVILTVLARPGANILLPKPGFP--LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189 (421)
Q Consensus 113 ~~-~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~--~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~ 189 (421)
+| |+|+|++++.++..+. +||++.+...++. .+...++..|+++..++.+++..+.++++. + ++++++++.++
T Consensus 72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~-~--l~~~t~lv~~~ 147 (361)
T 3m5u_A 72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV-E--FSDNADYAYIC 147 (361)
T ss_dssp EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC-C--CCTTSSEEEEE
T ss_pred EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh-h--cCCCCCEEEEe
Confidence 87 9999999999999988 8886533222222 244556778999999988654322245666 3 78889999998
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEee
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTS 269 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 269 (421)
+..|.||+..+. +++ +|+++++|.+++. |....++..+ .+++.|.+|++|.+| +|+++++
T Consensus 148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~ 207 (361)
T 3m5u_A 148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR 207 (361)
T ss_dssp SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence 888899998762 233 4999999999987 4333444332 266789999998777 7888886
Q ss_pred CCCcchhHHHHHHHHhh--------------hcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhc
Q 014631 270 DPSGILQELRIVDSIKG--------------YLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKE 334 (421)
Q Consensus 270 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~ 334 (421)
+ ++.+.+.. .....++++.....++.++++...+. +++.+.++.+++.+++++.|++
T Consensus 208 ~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~ 279 (361)
T 3m5u_A 208 K--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL 279 (361)
T ss_dssp H--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred H--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 34333322 11123578888888888888754445 6899999999999999999999
Q ss_pred CCCc-cccCCCC--ceeEEEEecCc-ccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHH
Q 014631 335 IPCI-TCPRKPE--GSMFVMVKLNL-SLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLG 408 (421)
Q Consensus 335 ~~g~-~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~ 408 (421)
++++ .....+. ....+.+.++. .. -+.++.. .++++||.+.+|... .+.+|+|+. ++.+|++++++
T Consensus 280 ~~g~~~~~~~~~~rs~~ivsf~~~~~~~-----~~~~~~~-~L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~ 351 (361)
T 3m5u_A 280 SNGFYKGHADKKDRSLMNVSFNIAKNKD-----LEPLFVK-EAEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCE 351 (361)
T ss_dssp STTSEEESSCGGGBCSSEEEEEESSCTT-----HHHHHHH-HHHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHH
T ss_pred CCCeeeccCCHHHcCCeEEEEECCCchh-----hhHHHHH-HHHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHH
Confidence 9766 4222222 12244555553 10 1234554 457789999887642 256999998 78999999999
Q ss_pred HHHHHHHHh
Q 014631 409 RIKAFCQRH 417 (421)
Q Consensus 409 ~l~~~~~~~ 417 (421)
.|+++.+++
T Consensus 352 al~~~~~~~ 360 (361)
T 3m5u_A 352 FMKEFQGKY 360 (361)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 999998764
No 222
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.92 E-value=8e-24 Score=198.55 Aligned_cols=329 Identities=13% Similarity=0.056 Sum_probs=219.5
Q ss_pred eeccCCCCCCCCCCCCcHHHHHHHHHHHhcCC--------CCCCC--CCCCCHHHHHHHHHHHhhhCCCCCCC-CcEEE-
Q 014631 47 IPLGHGDPSAFPCFRTTPVAADAVVDAVRSAE--------FDCYS--PSVGILPARRAIADYLNSELPCKLSP-DDVYL- 114 (421)
Q Consensus 47 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~y~--~~~g~~~l~~~ia~~l~~~~~~~~~~-~~i~~- 114 (421)
+.|....|+ +.|++|.+++.+.+.+.. .+..+ ....+.+.|+.++++++ +.+ ++|+|
T Consensus 28 ~yl~~agpt-----~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll~------~~~~~evif~ 96 (386)
T 3qm2_A 28 VFNFSSGPA-----MLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLLN------IPSNYKVLFC 96 (386)
T ss_dssp CEECCSSSC-----CCCHHHHHHHTCC-----------------------CCHHHHHHHHHHHT------CCTTEEEEEE
T ss_pred CccccCCCC-----CCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHhC------CCCCceEEEE
Confidence 344545555 678999999987664310 00111 13457899999999994 433 57888
Q ss_pred cCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeecc-CCCCccCCHHHHHhhhccCceEEEEeCC
Q 014631 115 TAGCKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLL-PEKGWEVDLDGLEALADENTVAMVIVNP 191 (421)
Q Consensus 115 ~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~-~~~~~~~d~e~l~~~~~~~~~~i~~~~p 191 (421)
|+|+|++++.++..++++||+|++...++.+ +...++..| ++..++.+ .+.+..+++++++..+++++++|.+++.
T Consensus 97 t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~h~ 175 (386)
T 3qm2_A 97 HGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYCPN 175 (386)
T ss_dssp ESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEECSE
T ss_pred cCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEECC
Confidence 6899999999999999999998765554443 345566778 88888865 1233336788888888889999988888
Q ss_pred CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeC
Q 014631 192 GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSD 270 (421)
Q Consensus 192 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 270 (421)
.|.||+. .| +++|. +|+++++|.+++. |..+.++..++ +.+.|.+|++|.+| +|++++++
T Consensus 176 et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v~~ 236 (386)
T 3qm2_A 176 ETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIVRE 236 (386)
T ss_dssp ETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEEEG
T ss_pred cCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEECH
Confidence 8899996 44 33333 7999999999987 44445555543 45678999998777 89999874
Q ss_pred CC-----cchhHHHHH--HHHhhhcccccCCchHHHHHHHHHhhccchh-HHHHHHHHHHHHHHHHHHHhhcCCCcccc-
Q 014631 271 PS-----GILQELRIV--DSIKGYLNISSGPATFVQGAVPQIFKNTKED-FFSKIVDILRDTADICYDRIKEIPCITCP- 341 (421)
Q Consensus 271 ~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~g~~~~- 341 (421)
.. ... +.+. ...........+++.....++.++++...+. +++++.++.+++++++++.|+++ ++...
T Consensus 237 ~~~~~~~~~~--p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~ 313 (386)
T 3qm2_A 237 DLLGKAHESC--PSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRND 313 (386)
T ss_dssp GGCSCCCTTS--CGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECC
T ss_pred HHHhhhcccC--CcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 32 000 0011 1111111223477888888888888754445 78999999999999999999987 55211
Q ss_pred CCCC--ceeEEEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHh
Q 014631 342 RKPE--GSMFVMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 342 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~ 417 (421)
..+. ....+.+.++... .+..++.. ++++||.+.+|... .+.+|+|+. ++++|++++++.|+++.+++
T Consensus 314 ~~~~~rs~~iv~f~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 314 VAQANRSRMNVPFQLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp BCGGGBCSSEEEEEESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHcCceEEEEECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 1121 1234555665311 13455555 57789999887644 256999998 68999999999999998764
No 223
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.92 E-value=4.2e-23 Score=207.75 Aligned_cols=313 Identities=12% Similarity=0.039 Sum_probs=207.6
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH-HhhcCceeEeeec
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN-ARHTRLEIRHFDL 162 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~-~~~~g~~~~~~~~ 162 (421)
+...+.++++.+|++++ .+ ..+++++|+++++..++.+++++||+|+++.++|.++... +...|+++++++.
T Consensus 171 ~~~~i~e~e~~lA~~~g------ae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~ 243 (730)
T 1c4k_A 171 HEGPAVAAEKHAARVYN------AD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQT 243 (730)
T ss_dssp TBTHHHHHHHHHHHHTT------CS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECE
T ss_pred ChHHHHHHHHHHHHHHC------CC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeC
Confidence 33346799999999873 32 4588899999999999999999999999999999998887 8889999988876
Q ss_pred cCCCCc----cCCHHHH-----HhhhccC------c----eEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 163 LPEKGW----EVDLDGL-----EALADEN------T----VAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 163 ~~~~~~----~~d~e~l-----~~~~~~~------~----~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
..+ .+ .+|++++ +++++++ + +++++++| |++|.+.+ +++|+++|+++|+++|+|++
T Consensus 244 ~~~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeA 318 (730)
T 1c4k_A 244 NRN-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSA 318 (730)
T ss_dssp EEC-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECT
T ss_pred Ccc-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcc
Confidence 432 23 3688888 8888665 4 78899999 58999964 88999999999999999999
Q ss_pred cccc-ccCCCC--ccccc--ccCC-CCCEEEEcccccccCCCCceE-EEEEeeCCCc-----chhHHHHHHHHhhhcccc
Q 014631 224 YDHL-TFGSTP--YVRMG--VFGS-TVPVITLGSMSKRWIVPGWRL-GWLVTSDPSG-----ILQELRIVDSIKGYLNIS 291 (421)
Q Consensus 224 ~~~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 291 (421)
|+.. .+++.. ..++. .++. +.+++++.|+||++ +|.+. |++++++... ..+...+.+.+.. ..+
T Consensus 319 h~~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~L--~g~~~gg~I~v~~~~l~g~~~~i~~~~~~~~~~~--~~s 394 (730)
T 1c4k_A 319 WVGYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQQ--AGFSQTSQIHKKDSHIKGQLRYCDHKHFNNSFNL--FMS 394 (730)
T ss_dssp TCCGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHHS--SCCTTCEEEEEECGGGTTSTTCCCHHHHHHHHHH--HSC
T ss_pred cccccccCcccCCcCcccccccCCCCCCEEEEECCCCCC--CCCCCEEEEEecchhhcCcccccCHHHHHHHHHH--hCC
Confidence 9753 333211 11121 1122 23568899999985 44443 5665554320 1111112222211 123
Q ss_pred cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhc-CCCccccCCCC-------------------------
Q 014631 292 SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKE-IPCITCPRKPE------------------------- 345 (421)
Q Consensus 292 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~g~~~~~~~~------------------------- 345 (421)
++++....+++..++.........+..+++.++.+.+++.|++ ++|+.++ .|.
T Consensus 395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE 473 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence 4666666666555554322223355567788888888999987 6787733 332
Q ss_pred ------------ce-eE-----EEEecCcc-----c-ccCCCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631 346 ------------GS-MF-----VMVKLNLS-----L-LEGISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE 399 (421)
Q Consensus 346 ------------~~-~~-----~~~~~~~~-----~-~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~ 399 (421)
.+ ++ +.+..+.. . .....+...+...| +++||.+.... ...+|++++ ++
T Consensus 474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t 548 (730)
T 1c4k_A 474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET 548 (730)
T ss_dssp TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence 11 11 33444310 0 00012355555554 66799886532 467899887 78
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q 014631 400 PSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~~ 418 (421)
++++++++++|.++.+++.
T Consensus 549 ~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 549 PAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 9999999999999887653
No 224
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.91 E-value=1.4e-22 Score=191.82 Aligned_cols=270 Identities=16% Similarity=0.159 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---cCCHHHHHHHHHHHhcCCCC
Q 014631 64 PVAADAVVDAVRS------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL---TAGCKQAIQVILTVLARPGA 134 (421)
Q Consensus 64 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd 134 (421)
..+.+++.+.... ...+.|+. .+..+|++.+|++++ . +..++ ++||++|+..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~g------~--e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVFK------T--EAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHHT------C--SEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHhC------C--CcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 3466777665311 11223433 356789999999883 2 33444 88999999999999999999
Q ss_pred eEEEcC-CCCcchHH----------HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC----CCCCccccc
Q 014631 135 NILLPK-PGFPLYEA----------NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN----PGNPCGNVF 199 (421)
Q Consensus 135 ~Vl~~~-p~y~~~~~----------~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~----p~nptG~~~ 199 (421)
+|+++. +.|.++.. .++..|++++.++.++ ++.+|++++++++++++++|++.+ |+||||.+
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v- 179 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTI- 179 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCH-
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCcc-
Confidence 999998 99998874 3456788888887653 456899999999998999999999 99999988
Q ss_pred CHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchh
Q 014631 200 TYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQ 276 (421)
Q Consensus 200 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~ 276 (421)
.++++|+++|++ +|+++|+|++|+.+.+...+ . ..+. .++++|+||.++.+| .+.||++++
T Consensus 180 --~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~------- 243 (409)
T 3jzl_A 180 --EKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGK------- 243 (409)
T ss_dssp --HHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEEC-------
T ss_pred --ccHHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeC-------
Confidence 789999999999 99999999999876532221 1 1222 388999999987766 446898885
Q ss_pred HHHHHHHHhhhccc-----ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCce----
Q 014631 277 ELRIVDSIKGYLNI-----SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGS---- 347 (421)
Q Consensus 277 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~---- 347 (421)
+++++.+...... ..++......++...+. ....+.++..+++.++.+.|+++ |+. + .|..+
T Consensus 244 -~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~ 314 (409)
T 3jzl_A 244 -EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT 314 (409)
T ss_dssp -HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred -HHHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence 3577777653211 11222211233333332 24566777888999999999988 655 3 23222
Q ss_pred -eEEEEecCcccccCCCChHHHHHHHHhhc
Q 014631 348 -MFVMVKLNLSLLEGISDDMEFALQLAKEE 376 (421)
Q Consensus 348 -~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 376 (421)
..+.+.+.... ....++..| ++.
T Consensus 315 ~~i~~i~l~~~~-----~~~~~~~~L-~~~ 338 (409)
T 3jzl_A 315 DLIQSVSFHNKE-----KMVAFAQAI-QAA 338 (409)
T ss_dssp SSCCEEECSCHH-----HHHHHHHHH-HHT
T ss_pred cEEEEEEeCCHH-----HHHHHHHHH-Hhc
Confidence 24555665321 244666655 444
No 225
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.91 E-value=1.6e-22 Score=192.01 Aligned_cols=254 Identities=15% Similarity=0.124 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHhc------CCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEE---cCCHHHHHHHHHHHhcCCCC
Q 014631 64 PVAADAVVDAVRS------AEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYL---TAGCKQAIQVILTVLARPGA 134 (421)
Q Consensus 64 ~~v~~a~~~~~~~------~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~---~~g~~~al~~~~~~l~~~gd 134 (421)
+.+.+++.+.... .....|+. .+..+|++.++++++ .+..++ ++||++|+..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~-~g~~~Le~~lA~l~g--------~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYND-IGRDSLDRVYANIFN--------TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHHT--------CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCc-hhHHHHHHHHHHHhC--------CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 4577777765322 11223433 356889999999883 233455 78899999999999999999
Q ss_pred eEEEcC-CCCcchH-----------HHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeC----CCCCcc
Q 014631 135 NILLPK-PGFPLYE-----------ANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVN----PGNPCG 196 (421)
Q Consensus 135 ~Vl~~~-p~y~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~----p~nptG 196 (421)
+|++++ +.|.++. ..++..|++++.++. +++.+|+++++++++ +++++|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 9998876 334567888888876 345789999999998 7899999999 999999
Q ss_pred cccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCc
Q 014631 197 NVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSG 273 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~ 273 (421)
.+ .++++|+++|++ +|+++++|++|+.+.+... ++ ..+. .++++|+||.++.+| .+.||++++
T Consensus 195 ~v---~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~---- 260 (427)
T 3hvy_A 195 RI---AEIAEIIKSIREVNENVIVFVDNCYGEFVEEKE---PT-DVGA---DIIAGSLIKNIGGGIATTGGYIAGK---- 260 (427)
T ss_dssp CH---HHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC----
T ss_pred cH---HHHHHHHHHHHHhCCCCEEEEECCccccccCCC---Cc-ccCC---eEEEECCcccccccccceEEEEEEC----
Confidence 88 889999999999 8999999999987653322 11 1222 388999999987655 456888885
Q ss_pred chhHHHHHHHHhhhccc--c---cCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee
Q 014631 274 ILQELRIVDSIKGYLNI--S---SGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM 348 (421)
Q Consensus 274 ~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~ 348 (421)
+++++++...... . .+++......+...+. ....+.++..+++..+.+.|+++ |+. + .|..+.
T Consensus 261 ----~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3hvy_A 261 ----EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLF-----MAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND 328 (427)
T ss_dssp ----HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred ----HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHh-----HHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 4677777664321 1 1221221233222232 24566778888999999999988 555 3 232222
Q ss_pred -----EEEEecC
Q 014631 349 -----FVMVKLN 355 (421)
Q Consensus 349 -----~~~~~~~ 355 (421)
.+.+.+.
T Consensus 329 ~~~~li~~~~l~ 340 (427)
T 3hvy_A 329 KRTDIIQAIKFN 340 (427)
T ss_dssp CCSSSEEEEECS
T ss_pred CCceEEEEEeCC
Confidence 5666665
No 226
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.91 E-value=1.7e-22 Score=191.92 Aligned_cols=247 Identities=15% Similarity=0.114 Sum_probs=175.2
Q ss_pred CCCHHHHHHHHHHHhhhCCCCCCCCcEEE--cCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHH-----------HHh
Q 014631 86 VGILPARRAIADYLNSELPCKLSPDDVYL--TAGCKQAIQVILTVLARPGANILLPK-PGFPLYEA-----------NAR 151 (421)
Q Consensus 86 ~g~~~l~~~ia~~l~~~~~~~~~~~~i~~--~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~-----------~~~ 151 (421)
.+..+|++.+|++++ .+ ..+++ ++||++|+..++.++++|||+|++++ +.|.++.. .+.
T Consensus 73 ~~~~~Le~~lA~l~g------~e-~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~ 145 (427)
T 3i16_A 73 IGRDSLDAVYARVFN------TE-SALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLK 145 (427)
T ss_dssp HHHHHHHHHHHHHHT------CS-EEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTG
T ss_pred HHHHHHHHHHHHHhC------Cc-ceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHH
Confidence 356789999999984 22 23443 78889999999999999999999999 99988763 345
Q ss_pred hcCceeEeeeccCCCCccCCHHHHHhhhc--cCceEEEEeC----CCCCcccccCHHHHHHHHHHHHh--cCcEEEEccc
Q 014631 152 HTRLEIRHFDLLPEKGWEVDLDGLEALAD--ENTVAMVIVN----PGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEV 223 (421)
Q Consensus 152 ~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~~~~i~~~~----p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~ 223 (421)
..|++++.++.+. ++.+|++++++.++ +++++|++++ |+||||.+ .++++|+++|++ +|+++++|++
T Consensus 146 ~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i---~dl~~i~~la~~~~~g~~livD~a 220 (427)
T 3i16_A 146 EFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLI---EDIKSIVDCVKNIRKDIICFVDNC 220 (427)
T ss_dssp GGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCH---HHHHHHHHHHHHHCTTSEEEEECT
T ss_pred HcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccH---HHHHHHHHHHHHhCCCCEEEEECC
Confidence 6788888887653 34689999999998 7899999999 99999988 889999999999 9999999999
Q ss_pred ccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHHHHHHHhhhccc--c-cCCch-HH
Q 014631 224 YDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELRIVDSIKGYLNI--S-SGPAT-FV 298 (421)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~-~~ 298 (421)
|+.+.+... ++ ..+. .++++|+||.++.+| .+.||++++ +++++++...... . ....+ +.
T Consensus 221 ~~~~~~~~~---p~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~--------~~li~~l~~~~~~~~~g~~~~~~~~ 285 (427)
T 3i16_A 221 YGEFMDTKE---PT-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGT--------KDCIEKTSYRLTVPGIGGECGSTFG 285 (427)
T ss_dssp TTTTSSSSC---GG-GGTC---SEEEEETTSGGGTTTCCSCEEEEEC--------HHHHHHHHHHHSCTTTGGGCCCCTT
T ss_pred CccccccCC---cc-ccCC---eEEEecCcccCCCCCCceEEEEEEC--------HHHHHHHHHhcccCccCccCCccHH
Confidence 988653322 11 1222 388999999987766 567999985 4677777663221 1 11111 21
Q ss_pred -HHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCcee-----EEEEecCcccccCCCChHHHHHHH
Q 014631 299 -QGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSM-----FVMVKLNLSLLEGISDDMEFALQL 372 (421)
Q Consensus 299 -~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l 372 (421)
...+...+ .....+.++..+++..+.+.|+++ ++. + .|..+. .+.+.+.... ....+++.+
T Consensus 286 ~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~~~~~~i~~i~l~~~~-----~~~~f~~~l 352 (427)
T 3i16_A 286 VVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDEKRSDIIQSIKFNDKD-----KLIEFCKGI 352 (427)
T ss_dssp CHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCSSSCEEEECSSHH-----HHHHHHHHH
T ss_pred HHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCCCCccEEEEEEECCHH-----HHHHHHHHH
Confidence 22222222 234567778889999999999988 555 3 333332 5666665321 244566655
No 227
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.91 E-value=3e-22 Score=203.38 Aligned_cols=308 Identities=9% Similarity=0.003 Sum_probs=202.4
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCC
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKG 167 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~ 167 (421)
+.++++.++++++ . .+.+++++|+++++..++.+++++||+|+++.++|.++...+...|+++++++...+ .
T Consensus 207 v~~~ee~la~l~G------~-d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~ 278 (755)
T 2vyc_A 207 FGESEKYAARVFG------A-DRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R 278 (755)
T ss_dssp HHHHHHHHHHHHT------C-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHhC------C-CceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence 4688888888873 3 346788999999999999999999999999999999998889999999999886543 2
Q ss_pred cc----C-----CHHHHHhhhcc--Cce--------EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 168 WE----V-----DLDGLEALADE--NTV--------AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 168 ~~----~-----d~e~l~~~~~~--~~~--------~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
++ + |++++++++++ +++ ++++++| ||+|.+.+ +++|+++|++||+++++|++|+.+.
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence 33 4 99999998854 344 8889998 69999954 8889999999999999999997542
Q ss_pred -cCCC--Ccccccc--cC-CCCCEEEEcccccccCCCCce-EEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHH
Q 014631 229 -FGST--PYVRMGV--FG-STVPVITLGSMSKRWIVPGWR-LGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGA 301 (421)
Q Consensus 229 -~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (421)
+++. +..++.. .+ ..++++++.|+||++ +|.+ .|++++++.....+...+.+.+.. ..+++++.+...+
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~L--~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~iaa 430 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLL--NALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICAS 430 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTSS--SCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECccccc--cCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHHH
Confidence 3221 1122211 12 234567899999984 4554 577777654101111122222222 1234677776666
Q ss_pred HHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC---------ccccCCCC---------------------------
Q 014631 302 VPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPC---------ITCPRKPE--------------------------- 345 (421)
Q Consensus 302 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g---------~~~~~~~~--------------------------- 345 (421)
+..+++.......++..++..++.+++++.|+++++ ++++ .|.
T Consensus 431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (755)
T 2vyc_A 431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQDC 509 (755)
T ss_dssp HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhhh
Confidence 666655322222345566666666777777765544 4322 221
Q ss_pred ----------------ce------eEEEEecCcccccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec-
Q 014631 346 ----------------GS------MFVMVKLNLSLLEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA- 397 (421)
Q Consensus 346 ----------------~~------~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~- 397 (421)
.+ .-+.+.++.....| +.+...+.. .|+++||.+... ....+|++++
T Consensus 510 ~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~-~L~~~gI~~e~~----~~~~v~~~~~~ 584 (755)
T 2vyc_A 510 WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTA-WLGRHGIVPTRT----TDFQIMFLFSM 584 (755)
T ss_dssp TBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHH-HHHTTTCCCSEE----CSSEEEEECCT
T ss_pred hccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHH-HHHHCCCEEeec----CCCeEEEEECC
Confidence 11 12233333211111 123345554 457799987543 2578999987
Q ss_pred -CCHHHHHHHHHHHHHHHHHh
Q 014631 398 -IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 398 -~~~e~l~~~~~~l~~~~~~~ 417 (421)
++++++++++++|.++.+.+
T Consensus 585 g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 585 GVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 78999999999999987655
No 228
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=1.7e-22 Score=192.99 Aligned_cols=252 Identities=16% Similarity=0.182 Sum_probs=170.1
Q ss_pred HHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcchHHHH----------hhcCceeEee
Q 014631 92 RRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPK-PGFPLYEANA----------RHTRLEIRHF 160 (421)
Q Consensus 92 ~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~~~~~----------~~~g~~~~~~ 160 (421)
++.+.+++.+.+|......+++++ ||++|+..++.+++++||+|++++ |.|.++...+ +..|++++.+
T Consensus 67 ~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~v 145 (431)
T 3ht4_A 67 RDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNAV 145 (431)
T ss_dssp HHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEEC
T ss_pred HHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEEe
Confidence 444555554444433222233355 678999999999999999999998 9999887554 3478898888
Q ss_pred eccCCCCccCCHHHHHhhhccCceEEEEe-CCCCCcccccCHHHHHHHHHHHHh--cCcEEEEcccccccccCCCCcccc
Q 014631 161 DLLPEKGWEVDLDGLEALADENTVAMVIV-NPGNPCGNVFTYQQLQKIAEKARK--LGIMVISDEVYDHLTFGSTPYVRM 237 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~~~~~~~i~~~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~ 237 (421)
+.++ ++.+|++++++.+++++++|+++ +|+||+|..++.+++++|+++|++ +|+++|+|++|+.+.+...+ .
T Consensus 146 ~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~---~ 220 (431)
T 3ht4_A 146 PLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEP---C 220 (431)
T ss_dssp CBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCG---G
T ss_pred CCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCc---c
Confidence 8754 36799999999999899999998 589999999999999999999999 99999999999987654331 1
Q ss_pred cccCCCCCEEEEcccccccCC-CCceEEEEEeeCCCcchhHHHHHHHHhhhccc-----ccCCchHHHHHHHHHhhccch
Q 014631 238 GVFGSTVPVITLGSMSKRWIV-PGWRLGWLVTSDPSGILQELRIVDSIKGYLNI-----SSGPATFVQGAVPQIFKNTKE 311 (421)
Q Consensus 238 ~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~~~ 311 (421)
.++. .++++|+||.++. .+...||++++ +++++.+...... ..+++.....++...+.
T Consensus 221 -~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~--------~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~---- 284 (431)
T 3ht4_A 221 -HVGA---DLMAGSLIKNPGGGIVKTGGYIVGK--------EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF---- 284 (431)
T ss_dssp -GTTC---SEEEEETTSGGGTTTCSSCEEEEEC--------HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH----
T ss_pred -ccCC---eEEEcCccccCCCCCCCceEEEEec--------HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhh----
Confidence 2222 2889999999654 22344999985 3566766553321 11221121222223332
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCcccc---CCCCceeEEEEecCcccccCCCChHHHHHHH
Q 014631 312 DFFSKIVDILRDTADICYDRIKEIPCITCP---RKPEGSMFVMVKLNLSLLEGISDDMEFALQL 372 (421)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 372 (421)
....+.++..+++..+.+.|+++ |+.+. ..+..+....+.++... ...+++..+
T Consensus 285 -~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~~-----~~~~~~~~l 341 (431)
T 3ht4_A 285 -LAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDKD-----RMIAFCQAI 341 (431)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCHH-----HHHHHHHHH
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCHH-----HHHHHHHHH
Confidence 24556677778888888888876 55421 01122335556665321 244566655
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.89 E-value=2e-21 Score=185.09 Aligned_cols=340 Identities=12% Similarity=0.084 Sum_probs=210.8
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQ 120 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~ 120 (421)
..|++||||..|.-.... -..+|.+.+|+.+++++... ...+.....++.+.+++.+ + ..+.++|+++|++
T Consensus 84 ~dG~~ylD~~~g~~~~~l-GH~hp~v~~Av~~q~~~~~~-~~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE 154 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGVY-GHSAPEIRDAVIEAMQGGIN-LTGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE 154 (454)
T ss_dssp TTCCEEEESSGGGGTTTT-CSCCHHHHHHHHHHHHTCSC-CCSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred CCCCEEEEccccHHhhcc-cCCCHHHHHHHHHHHhcCCC-ccCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence 348899999777533222 25789999999999987532 1222333456666666665 2 4689999999999
Q ss_pred HHHHHHHHhcC--CCCeEEEcCCCCcchHHHHhhcC------ceeEeeeccCCCCccCCHHHHHhhhccC--ceEEEEeC
Q 014631 121 AIQVILTVLAR--PGANILLPKPGFPLYEANARHTR------LEIRHFDLLPEKGWEVDLDGLEALADEN--TVAMVIVN 190 (421)
Q Consensus 121 al~~~~~~l~~--~gd~Vl~~~p~y~~~~~~~~~~g------~~~~~~~~~~~~~~~~d~e~l~~~~~~~--~~~i~~~~ 190 (421)
|+..+++.... ..++|+..+.+|++....+.... .....+|. -|++.+++.+... ..+.++..
T Consensus 155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE 227 (454)
T 4ao9_A 155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE 227 (454)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence 99999987642 23689999999988543222111 11222221 1778888877532 23445667
Q ss_pred C-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEe
Q 014631 191 P-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVT 268 (421)
Q Consensus 191 p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 268 (421)
| +...|.+ .+++.+++|.++|++||+++|+||++++ +.|.... ...++...+++ +++|.+ ..|+++|.+.+
T Consensus 228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~a-~e~~gv~PDi~---t~gK~l-ggG~Piga~~~ 300 (454)
T 4ao9_A 228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHGL-ANKLGIRSDLT---TLGKYI-GGGMSFGAFGG 300 (454)
T ss_dssp SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTCH-HHHHTCCCSEE---EEEGGG-GTTSSCEEEEE
T ss_pred cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCccccc-hhccCCCCcEE---Eecccc-CCCCcceeeee
Confidence 7 5557765 5678899999999999999999999984 4444322 12233222333 678995 56899999998
Q ss_pred eCCCcchhHHHHHHHHhhhc-----ccccCCchHHHHHHHHHhhccc-hhHHHHHHHHHHHHHHHHHHHhhcCCCccccC
Q 014631 269 SDPSGILQELRIVDSIKGYL-----NISSGPATFVQGAVPQIFKNTK-EDFFSKIVDILRDTADICYDRIKEIPCITCPR 342 (421)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~ 342 (421)
+ .++++.+.... ..+.+.|+++++++.++|+... ++..++..+.-...++.+.+.+++.+-+..+
T Consensus 301 ~--------~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v- 371 (454)
T 4ao9_A 301 R--------ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNALCANEGVAMQF- 371 (454)
T ss_dssp C--------HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHTBSCEE-
T ss_pred H--------HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHhhCCCCEEE-
Confidence 5 46777665421 2345778999999988887543 3333333333333334444433333211111
Q ss_pred CCCceeEEEEecCcccccC-----CCCh---HHHHHHHHhhcCeeEEeCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Q 014631 343 KPEGSMFVMVKLNLSLLEG-----ISDD---MEFALQLAKEESVIVLPGMAVGMKNWLRITFAIEPSALEEGLGRIKAFC 414 (421)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~-----~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~~~~e~l~~~~~~l~~~~ 414 (421)
... |.++.+.+....... ..+. ..++..+ .++||++.|. +.+.+++..+++||++++++|++++
T Consensus 372 rg~-G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~------~~~~~s~~~T~~dId~~l~al~~~l 443 (454)
T 4ao9_A 372 TGI-GSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPR------GFVVLSLPLTDADIDRYVAAIGSFI 443 (454)
T ss_dssp EEE-TTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTT------CEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred eee-ceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCC------CCEEEeCCCCHHHHHHHHHHHHHHH
Confidence 122 345555553221100 0011 2334444 5679998774 3455566689999999999999999
Q ss_pred HHhhhc
Q 014631 415 QRHAKQ 420 (421)
Q Consensus 415 ~~~~~~ 420 (421)
.++.+.
T Consensus 444 ~~~~a~ 449 (454)
T 4ao9_A 444 GGHGAL 449 (454)
T ss_dssp HHSGGG
T ss_pred Hhcccc
Confidence 987653
No 230
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.89 E-value=1.8e-20 Score=180.06 Aligned_cols=353 Identities=14% Similarity=0.085 Sum_probs=217.0
Q ss_pred cCCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCC-CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 41 NDPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVG-ILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 41 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g-~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
..|.+|+|+..|.-....+ ..+|.+.+++.+++++.. .|....+ ..+....+|+.|.+..+ .+.+.++|+++|+
T Consensus 64 ~dG~~ylD~~~g~~~~~lG-h~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~sGs 138 (473)
T 4e3q_A 64 VNGRRYLDANSGLWNMVAG-FDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVSP--FDSGRVFYTNSGS 138 (473)
T ss_dssp TTCCEEEETTTTTTTCTTC-SCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHSS--CSSCEEEEESSHH
T ss_pred CCCCEEEEcccCHHHhhcc-CCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhCC--CCccEEEEeCchH
Confidence 4588999998886443333 578999999999998732 2222111 12333344444444332 3456899999999
Q ss_pred HHHHHHHHHhc-------CCC-CeEEEcCCCCcchHHHHhhcCc------------eeEeeeccCC---CCccCC-----
Q 014631 120 QAIQVILTVLA-------RPG-ANILLPKPGFPLYEANARHTRL------------EIRHFDLLPE---KGWEVD----- 171 (421)
Q Consensus 120 ~al~~~~~~l~-------~~g-d~Vl~~~p~y~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~d----- 171 (421)
+|+..+++... +++ .+|+....+|++....+...+. ....++.+.. ......
T Consensus 139 EA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 218 (473)
T 4e3q_A 139 EANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFV 218 (473)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHHH
Confidence 99999998643 233 5788899999986544332211 1112221100 000011
Q ss_pred ---HHHHHhhhc---cCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCC
Q 014631 172 ---LDGLEALAD---ENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGST 243 (421)
Q Consensus 172 ---~e~l~~~~~---~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 243 (421)
.+++++.+. ++..+.++..| +...|++ .+++.+++|.++|++||+++|.||+++++.+.|..+ ....++..
T Consensus 219 ~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~ 297 (473)
T 4e3q_A 219 ARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDFT 297 (473)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTCC
T ss_pred HHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCCC
Confidence 233444332 24456677777 5566765 566889999999999999999999999998877654 22334433
Q ss_pred CCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhh-------c-ccccCCchHHHHHHHHHhhccchhHHH
Q 014631 244 VPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGY-------L-NISSGPATFVQGAVPQIFKNTKEDFFS 315 (421)
Q Consensus 244 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~-------~-~~~~~~~~~~~~~~~~~l~~~~~~~~~ 315 (421)
.+++ +++|.++..++++|.++++ +++.+.+... . ..+.+.++++++++.+.|+...++.+.
T Consensus 298 PDi~---t~~K~l~gG~~Pl~av~~~--------~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l~ 366 (473)
T 4e3q_A 298 PDAI---ISSKNLTAGFFPMGAVILG--------PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGLA 366 (473)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEEC--------HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSHH
T ss_pred CChH---HhcccccCCCCCccccccc--------HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccHH
Confidence 3344 5789975555999999996 3566665432 1 235678999999998888754333222
Q ss_pred HHHHHHHHHHHHHHHHhh---cCCCccccCCCCceeEEEEecCccccc--CC---CChHHHHHHHHhhcCeeEEeCCCCC
Q 014631 316 KIVDILRDTADICYDRIK---EIPCITCPRKPEGSMFVMVKLNLSLLE--GI---SDDMEFALQLAKEESVIVLPGMAVG 387 (421)
Q Consensus 316 ~~~~~~~~~~~~~~~~l~---~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~ll~~~gv~v~~g~~~~ 387 (421)
++.+++.+++.+.|+ +.|.+..+ . .-|++..+++...... .. ......+...+.++||++.|.
T Consensus 367 ---~~~~~~g~~l~~~L~~l~~~~~v~~v-R-G~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---- 437 (473)
T 4e3q_A 367 ---ENVRRLAPRFEERLKHIAERPNIGEY-R-GIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPL---- 437 (473)
T ss_dssp ---HHHHHHHHHHHHHHHHHTTSTTEEEE-E-EETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEE----
T ss_pred ---HHHHHHHHHHHHHHHHHhcCCCeeEE-e-ecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEec----
Confidence 233333444444443 34554422 2 2245666665322110 00 011233344557789999874
Q ss_pred CCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 388 MKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 388 ~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
.+.+|++++ .+++++++++++|.+++++..++
T Consensus 438 -g~~i~l~PPL~it~~eid~~~~~l~~al~~v~ae 471 (473)
T 4e3q_A 438 -GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFAE 471 (473)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 367999876 79999999999999999887654
No 231
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.88 E-value=3e-20 Score=177.79 Aligned_cols=352 Identities=16% Similarity=0.135 Sum_probs=213.2
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCC-CC-CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHH
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFD-CY-SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCK 119 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~y-~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~ 119 (421)
.|..++||..|.-.... ...+|.+.+|+.+++.+.... .+ .+.....++.+.+++.. + ....+.++++++|+
T Consensus 62 dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTSV-GASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTCTT-CTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHHhc-CCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence 47888898777433222 357899999999998873211 11 12222234444444443 2 11245799999999
Q ss_pred HHHHHHHHHhc--CCCCeEEEcCCCCcchHHHHhhc-C-------------ceeEeeeccC----CCCccCCHHHH----
Q 014631 120 QAIQVILTVLA--RPGANILLPKPGFPLYEANARHT-R-------------LEIRHFDLLP----EKGWEVDLDGL---- 175 (421)
Q Consensus 120 ~al~~~~~~l~--~~gd~Vl~~~p~y~~~~~~~~~~-g-------------~~~~~~~~~~----~~~~~~d~e~l---- 175 (421)
+|+..+++... ...++|+..+.+|++....+... + ..+..+|... .....-+.+.+
T Consensus 136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (456)
T 4atq_A 136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI 215 (456)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence 99999997653 23378999999999875443321 1 1123333211 00001122222
Q ss_pred ---HhhhccCceEEEEeCC-CCCcccc-cCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEc
Q 014631 176 ---EALADENTVAMVIVNP-GNPCGNV-FTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLG 250 (421)
Q Consensus 176 ---~~~~~~~~~~i~~~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 250 (421)
++.+.++..+.++..| +...|.+ .+++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++
T Consensus 216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv--- 291 (456)
T 4atq_A 216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII--- 291 (456)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE---
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh---
Confidence 2223344556667777 5556765 567889999999999999999999999988777643 334444333344
Q ss_pred ccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcc-cccCCchHHHHHHHHHhhccchhHH-HHHHHHHHHHHHHH
Q 014631 251 SMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLN-ISSGPATFVQGAVPQIFKNTKEDFF-SKIVDILRDTADIC 328 (421)
Q Consensus 251 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~ 328 (421)
+++|.+ ..|+++|.++++ +++++.+..... .+++.++++++++.+.|+...++.+ ++..+.-....+.+
T Consensus 292 t~gK~l-ggg~P~~av~~~--------~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~~~~~~~g~~l~~~L 362 (456)
T 4atq_A 292 TMAKGI-AGGLPLSAITGR--------ADLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLNGRARHIEELALGKL 362 (456)
T ss_dssp EECGGG-GTTSSCEEEEEE--------HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred hhhhcc-cCcCCceeeEec--------HHHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHHHHHHHHHHHHHHHH
Confidence 567995 578999999986 356666655432 4568899999999998876433333 22222222233333
Q ss_pred HHHhhcCCC-----ccccCCCCceeEEEEecCcccccCC--CChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CC
Q 014631 329 YDRIKEIPC-----ITCPRKPEGSMFVMVKLNLSLLEGI--SDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IE 399 (421)
Q Consensus 329 ~~~l~~~~g-----~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~ 399 (421)
.+...+.+. +..+ . .-|++..+++........ .....+... +.++|+++.++... .+.+|+.++ .+
T Consensus 363 ~~l~~~~~~~~~~~v~~V-R-G~Gl~~giel~~~~~~~~~~~~~~~v~~~-~~~~Gvl~~~~g~~--~~~irl~PpL~it 437 (456)
T 4atq_A 363 RELAAELSAGGGSVVGDI-R-GRGAMLAIELVQPGSKEPNAELTKAVAAA-CLKEGVIILTCGTY--GNVIRLLPPLVIS 437 (456)
T ss_dssp HHHHHHCC-----CEEEE-E-EETTEEEEEEBCTTSCCBCHHHHHHHHHH-HHHTTEECEEECTT--SCEEEECCCTTCC
T ss_pred HHHHHhcccccCCceEEe-e-ecceEEEEEEecCCCCCcCHHHHHHHHHH-HHHCCCEEEecCCC--CCEEEEECCCCCC
Confidence 333333321 2211 1 225666677743211100 002234444 46789999875332 468999987 78
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 014631 400 PSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 400 ~e~l~~~~~~l~~~~~~~ 417 (421)
++++++++++|.++++.+
T Consensus 438 ~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 438 DELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998753
No 232
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.86 E-value=1.3e-19 Score=180.93 Aligned_cols=307 Identities=13% Similarity=0.057 Sum_probs=193.1
Q ss_pred CCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 84 PSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 84 ~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
+..-+.++++.+|++++. ...+++++|++.|+..++.++++|||+|+++.++|.++...+...|+++++++..
T Consensus 193 ~~g~i~eaE~~lA~~fGa-------~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~ 265 (715)
T 3n75_A 193 HSGPHKEAEQYIARVFNA-------DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPT 265 (715)
T ss_dssp TBTHHHHHHHHHHHHHTC-------SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCC
T ss_pred CcHHHHHHHHHHHHHhCC-------CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecc
Confidence 333467999999999842 3456778888899999999999999999999999999999999999999998865
Q ss_pred CCCCccC---------CHHHHHhhhcc--Cce---EEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc-
Q 014631 164 PEKGWEV---------DLDGLEALADE--NTV---AMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT- 228 (421)
Q Consensus 164 ~~~~~~~---------d~e~l~~~~~~--~~~---~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~- 228 (421)
. +.+++ |++++++++.+ +++ ++++++| |++|.+++ +++|.++|+.++ +++||+|+.+.
T Consensus 266 ~-~~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~ 338 (715)
T 3n75_A 266 R-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTN 338 (715)
T ss_dssp B-CTTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGG
T ss_pred c-cccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccc
Confidence 4 34543 89999998864 334 7899999 99999976 566677777663 78999998653
Q ss_pred cCCCCcccccccCC---CCC-EEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHH
Q 014631 229 FGSTPYVRMGVFGS---TVP-VITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQ 304 (421)
Q Consensus 229 ~~~~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (421)
+++. ......+.. .+. ++++.|+||+++.. ...|++.+++.. . .+..+..... ..+++++.+..+++..
T Consensus 339 f~~~-~~~~~al~~g~~aD~vii~~~S~hKtL~gl-tqgs~i~v~~~i--~--~~~~~~~~~~-~~STSpsy~~~Aslda 411 (715)
T 3n75_A 339 FSPI-YEGKCGMSGGRVEGKVIYETQSTHKLLAAF-SQASMIHVKGDV--N--EETFNEAYMM-HTTTSPHYGIVASTET 411 (715)
T ss_dssp GSGG-GTTSSTTSSSCCTTCEEEEEECHHHHSSCC-TTCEEEEEESCC--C--HHHHHHHHHH-TSCSSCCHHHHHHHHH
T ss_pred cCCc-cccccccccCcCCCEEEEEEecccccccCC-CCeeEEEeCchh--h--HHHHHHHHHh-hcCCCchHHHHHHHHH
Confidence 3321 111122221 133 35689999996432 135888887541 1 1122222222 2245777777777766
Q ss_pred HhhccchhHHHHHHHHHHHHHHHHHHHhhcCCC------ccccCCCC-----------------------cee------E
Q 014631 305 IFKNTKEDFFSKIVDILRDTADICYDRIKEIPC------ITCPRKPE-----------------------GSM------F 349 (421)
Q Consensus 305 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g------~~~~~~~~-----------------------~~~------~ 349 (421)
+++......-.+..+++.++.+++++.|+++++ +.++ .++ .+. =
T Consensus 412 A~~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~K 490 (715)
T 3n75_A 412 AAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIK 490 (715)
T ss_dssp HHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEES-SCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTE
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeecc-CcccccchhhhccCcccccccccccccCcccCCCeE
Confidence 664322222344566777777777777765532 2222 111 000 1
Q ss_pred EEEecCcccccC-----CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEE--EecCCHHHHHHHHHHHHHHHHHh
Q 014631 350 VMVKLNLSLLEG-----ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRI--TFAIEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 350 ~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi--~~~~~~e~l~~~~~~l~~~~~~~ 417 (421)
+++..+.....| +.....+ .+.|+++||.+.-.. ...+-+ +++.+++++++++++|.++-+.+
T Consensus 491 l~i~~~~~~~~G~~~~~Gi~g~~~-~~~L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 491 VTLLTPGMEKDGTMSDFGIPASIV-AKYLDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp EEEECSCBCTTSCBCSSCCCHHHH-HHHHHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEcCCCCCCCccccCCCcHHHH-HHHHHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 222222110001 1223444 445578899886433 233333 44578899999999988876543
No 233
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.81 E-value=2.8e-19 Score=182.92 Aligned_cols=347 Identities=13% Similarity=0.074 Sum_probs=207.7
Q ss_pred CeeeccCCCCCCCCCCCC-cHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCC-CCcEEEcCCHHHHH
Q 014631 45 PIIPLGHGDPSAFPCFRT-TPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLS-PDDVYLTAGCKQAI 122 (421)
Q Consensus 45 ~~i~l~~g~~~~~~~~~~-~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~-~~~i~~~~g~~~al 122 (421)
+++|+..|.-....+ .. +|++.+|+.+++.+.....+.. ... +....+++.|.+..+ .. .+.++|+++|++|+
T Consensus 381 ~ylD~~sg~~~~~lG-h~~~p~i~~Ai~~Q~~~l~h~~~~~-~~~-~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA~ 455 (831)
T 4a0g_A 381 QQFDACASWWTQGPD-PTFQAELAREMGYTAARFGHVMFPE-NVY-EPALKCAELLLDGVG--KGWASRVYFSDNGSTAI 455 (831)
T ss_dssp EEEETTHHHHTCCCC-HHHHHHHHHHHHHHHHHHSSCCCTT-EEC-HHHHHHHHHHHHTTT--TTTCCEEEEESSHHHHH
T ss_pred heeeecccHhhcCCC-CCCCHHHHHHHHHHHhhcccccccc-cCC-HHHHHHHHHHHHhCC--CCCCCEEEECCChhHHH
Confidence 567776663222222 34 8999999999988732111111 111 233344444443222 12 46899999999999
Q ss_pred HHHHHHhc-----CC-----------C-CeEEEcCCCCcchHHHHhhc-Cce---------------e------------
Q 014631 123 QVILTVLA-----RP-----------G-ANILLPKPGFPLYEANARHT-RLE---------------I------------ 157 (421)
Q Consensus 123 ~~~~~~l~-----~~-----------g-d~Vl~~~p~y~~~~~~~~~~-g~~---------------~------------ 157 (421)
..+++... +. + .+|+..+.+|++....+... |.. +
T Consensus 456 E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 535 (831)
T 4a0g_A 456 EIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSNG 535 (831)
T ss_dssp HHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEETT
T ss_pred HHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccCC
Confidence 99988752 12 2 37888999998764443322 210 0
Q ss_pred -EeeeccCC------C--CccCC------------------HHHHHhhhc-------cCceEEEEeCC--CCCcccc-cC
Q 014631 158 -RHFDLLPE------K--GWEVD------------------LDGLEALAD-------ENTVAMVIVNP--GNPCGNV-FT 200 (421)
Q Consensus 158 -~~~~~~~~------~--~~~~d------------------~e~l~~~~~-------~~~~~i~~~~p--~nptG~~-~~ 200 (421)
..++.+.. + .+. + .+.+++.+. ....+.++..| ++..|.. +|
T Consensus 536 ~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 536 SWNISLPESFSEIAPEYGTFT-SRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp EEEEECCTTSCCCCSSTTEES-CHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred ceEecCCcccccccccccccc-chhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 01111100 0 000 1 245666654 23445566677 5777876 57
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccccCCCCcccccccCCCCCEEEEcccccccCCCC-ceEEEEEeeCCCcchhHHH
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPG-WRLGWLVTSDPSGILQELR 279 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~ 279 (421)
++.+++|.++|++||+++|+||+++++.+.|..+ ....++...+++ +++|.++. | +++|+++++ ++
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~--------~~ 681 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLAT--------DA 681 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEEC--------HH
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEEC--------HH
Confidence 8889999999999999999999999988877654 333333333333 68999755 6 899999996 46
Q ss_pred HHHHHhhh-------cccccCCchHHHHHHHHHhhccchh-HHHHHH---HHHHH-HHHHHHHHhhcCCCccccCCCCce
Q 014631 280 IVDSIKGY-------LNISSGPATFVQGAVPQIFKNTKED-FFSKIV---DILRD-TADICYDRIKEIPCITCPRKPEGS 347 (421)
Q Consensus 280 ~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~---~~~~~-~~~~~~~~l~~~~g~~~~~~~~~~ 347 (421)
+++.+... ...+++.++++++++.++|+...++ ..++.. +++++ ..+.+.+.+.+.|.+..+ . ..|
T Consensus 682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v-r-g~G 759 (831)
T 4a0g_A 682 VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV-V-VIG 759 (831)
T ss_dssp HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE-E-EET
T ss_pred HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE-e-ecc
Confidence 77766542 1234678899999988888642211 111111 11111 122344556666666533 3 335
Q ss_pred eEEEEecCccccc-C--CCChHHHHHHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhh
Q 014631 348 MFVMVKLNLSLLE-G--ISDDMEFALQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 348 ~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~ 418 (421)
.+..+++...... . ......+... +.++||++.|+ .+.+|++++ .++++|++++++|.++++++.
T Consensus 760 l~~~iel~~~~~~~~~~~~~a~~~~~~-l~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l~ 829 (831)
T 4a0g_A 760 TLFALELKADASNSGYASLYAKSLLIM-LREDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEFN 829 (831)
T ss_dssp TEEEEEEC---------CHHHHHHHHH-HHHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTTC
T ss_pred cEEEEEEecCccccccchHHHHHHHHH-HHHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 6666776432100 0 0012344444 56789999885 378999965 899999999999999987653
No 234
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.80 E-value=6.4e-17 Score=149.53 Aligned_cols=333 Identities=14% Similarity=0.058 Sum_probs=212.8
Q ss_pred CCcHHHHHHHHHHHhcCCCCC------CCCCCCCHHHHHHHHHHHhhhCCCCCCCC----cEEEcCCHHHHHHHHHHHhc
Q 014631 61 RTTPVAADAVVDAVRSAEFDC------YSPSVGILPARRAIADYLNSELPCKLSPD----DVYLTAGCKQAIQVILTVLA 130 (421)
Q Consensus 61 ~~~~~v~~a~~~~~~~~~~~~------y~~~~g~~~l~~~ia~~l~~~~~~~~~~~----~i~~~~g~~~al~~~~~~l~ 130 (421)
...+.+.+++-..+.+....+ |+...-+.+++....+...+.||. +.. +|- ..+|++|+..++.+|+
T Consensus 65 ~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~la~~rak~lF~a--~~A~w~VNVQ-P~SGs~AN~avy~All 141 (490)
T 3ou5_A 65 FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRALEAFDL--DPAQWGVNVQ-PYSGSPANLAVYTALL 141 (490)
T ss_dssp CCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHHHHHHHHHHTTC--CTTTEEEECC-CSSHHHHHHHHHHHHC
T ss_pred cCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHHHHHHHHHHhCC--CccccCCCCC-cCCHHHHHHHHHHHHc
Confidence 456888898887776633333 334444678888888888888873 343 333 3567788999999999
Q ss_pred CCCCeEEEcCCCCcchHHHH--------hhcC--ceeEeeeccCCCCccCCHHHHHhhhcc-CceEEEEeCCCCCccccc
Q 014631 131 RPGANILLPKPGFPLYEANA--------RHTR--LEIRHFDLLPEKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVF 199 (421)
Q Consensus 131 ~~gd~Vl~~~p~y~~~~~~~--------~~~g--~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~ 199 (421)
+|||+|+..+..+.++...- ...| .+...+++++++ ..+|.|++++.... ++++|+...-.+|-=
T Consensus 142 ~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd~~t-~~IDyd~~~~~A~~~kPklIi~G~SaY~r~--- 217 (490)
T 3ou5_A 142 QPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNPKT-GLIDYNQLALTARLFRPRLIIAGTSAYARL--- 217 (490)
T ss_dssp C-CCCEECBC----------------------------CBCEETTT-TEECHHHHHHHHHHHCCSEEEECCSSCCSC---
T ss_pred CCCCEEEecccCCCCcccccccCCCcccccccccccccccccCCCC-CcccHHHHHHHHhhcCCCeEEECCccCccc---
Confidence 99999999988776553221 1122 245556666543 46999999986654 677665443344432
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcccc-cccccCCCCcccccccCCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhH-
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVY-DHLTFGSTPYVRMGVFGSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQE- 277 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~- 277 (421)
-+++++.++|++.|.++++|.+| ++++-+|..+.|+... + ++.+|.+|+ ++|.|.|.+++++.......
T Consensus 218 --id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~~~A--D---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k 288 (490)
T 3ou5_A 218 --IDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFKHA--D---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPK 288 (490)
T ss_dssp --CCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGTC--S---EEEEESSST--TCSCSCEEEEEECSEEEECC-
T ss_pred --cCHHHHHHHHhhcccEEEechhhhhhhhcccccCCccccc--e---EEecccccc--ccCCCceEEEecccccccccc
Confidence 23788888899999999999999 4455556555555432 2 778899999 58889999998753100000
Q ss_pred ------HHHHHHHhhhccc--ccCCchHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCceeE
Q 014631 278 ------LRIVDSIKGYLNI--SSGPATFVQGAVPQIFKNTKEDFFSKIVDILRDTADICYDRIKEIPCITCPRKPEGSMF 349 (421)
Q Consensus 278 ------~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~~~~~~~~~ 349 (421)
.++.+++...... .++|.....++.+.++.......+.+.+++..++...|.+.|.+. |+.++.....+..
T Consensus 289 ~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHl 367 (490)
T 3ou5_A 289 TGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHL 367 (490)
T ss_dssp -CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred ccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceE
Confidence 0245666555432 234444444444444544345677888999999999999999987 8886656666777
Q ss_pred EEEecCcccccCCCChHHHHHHHHhhcCeeEEeCCCC-C----CCCeEEEEec------CCHHHHHHHHHHHHHHHH
Q 014631 350 VMVKLNLSLLEGISDDMEFALQLAKEESVIVLPGMAV-G----MKNWLRITFA------IEPSALEEGLGRIKAFCQ 415 (421)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-~----~~~~iRi~~~------~~~e~l~~~~~~l~~~~~ 415 (421)
+++++..... +...++.+|++.||.+.--..+ . .++.|||... ..++|++++.+.|.+++.
T Consensus 368 vLvDl~~~g~-----tG~~ae~~Le~agItvNkN~iP~D~sp~~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 368 VLVDLRPKGL-----DGARAERVLELVSITANKNTCPGDRSAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp EEEECGGGTC-----CHHHHHHHHHHTTEECEEECCTTCCCSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEeccccCC-----CHHHHHHHHHHcCcEECCCCCCCCCCCCCCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 8888765422 3445667789999998632221 1 2568999975 457899999999888774
No 235
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.80 E-value=1.2e-17 Score=154.95 Aligned_cols=312 Identities=11% Similarity=0.065 Sum_probs=196.7
Q ss_pred HHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCC---C-CeEEEcCCCCcchHHHHhhcCceeEeeeccC-C
Q 014631 91 ARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARP---G-ANILLPKPGFPLYEANARHTRLEIRHFDLLP-E 165 (421)
Q Consensus 91 l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~---g-d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~ 165 (421)
.+..+.+|+... |++. ....++++|+|.++..++.+.+++ | |+|+++..+|.+...++...|+++++++... +
T Consensus 118 tn~l~ld~L~~~-G~~~-~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~ 195 (501)
T 3hl2_A 118 TNSLVLDIIKLA-GVHT-VANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEG 195 (501)
T ss_dssp HHHHHHHHHHHT-TCTT-CCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEET
T ss_pred HHHHHHHHHHHc-CCCC-CCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecc
Confidence 344555666554 6552 345889999997777777666553 4 9999999999999999999999999987532 2
Q ss_pred CCccCCHHHHHhhhcc---CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCc-cccccc
Q 014631 166 KGWEVDLDGLEALADE---NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPY-VRMGVF 240 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~~---~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~ 240 (421)
+..++|++++++++++ +..+++++.+ .|..+.+ +++++|+++|++||+++++|+||+......... .....+
T Consensus 196 ~~~~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~---ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~ 272 (501)
T 3hl2_A 196 DELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVP---DRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARV 272 (501)
T ss_dssp TEEEECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHhcCCCcEEEEEecCCCCCCccc---ccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhc
Confidence 3578999999998864 3344444444 4544455 679999999999999999999998743111111 011122
Q ss_pred C-CCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHHHHH
Q 014631 241 G-STVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSKIVD 319 (421)
Q Consensus 241 ~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 319 (421)
+ .+ +++.|.+|.+..+ +..|.+..++ +++.+.+..... +..+....+.+..++.....+++.+..+
T Consensus 273 GrAD---~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~yP--Gr~S~Spsldl~~tLL~lGr~Gy~~ll~ 339 (501)
T 3hl2_A 273 GRID---AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMYP--GRASASPSLDVLITLLSLGSNGYKKLLK 339 (501)
T ss_dssp SCCC---EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTSC--SCBCSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc---EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhCC--CCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 22 6788999997554 3335555543 345565543322 1222222232222333334567788888
Q ss_pred HHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcCee----EEeCC--------
Q 014631 320 ILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEESVI----VLPGM-------- 384 (421)
Q Consensus 320 ~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~-------- 384 (421)
+..++.+++.+.|+++. |-.++..|.+..-+-+.+........ .....+-.+|..++|. |.+|.
T Consensus 340 e~~ela~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~ 418 (501)
T 3hl2_A 340 ERKEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYT 418 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEE
T ss_pred HHHHHHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCee
Confidence 88888888888888742 33333345555445555543211111 2333444455555662 34454
Q ss_pred --CCCC------CCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhcC
Q 014631 385 --AVGM------KNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQQ 421 (421)
Q Consensus 385 --~~~~------~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~~ 421 (421)
.|+. ..++-++.+ .+++|++.++.+|.+++.++++++
T Consensus 419 f~~~g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~~ 465 (501)
T 3hl2_A 419 FRGFMSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKER 465 (501)
T ss_dssp ESSTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC--
T ss_pred ecCcccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 3433 357777665 899999999999999999987653
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.75 E-value=1.4e-16 Score=150.05 Aligned_cols=315 Identities=9% Similarity=0.033 Sum_probs=187.9
Q ss_pred CHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcC----CCCeEEEcCCCCcchHHHHhhcCceeEeeecc
Q 014631 88 ILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLAR----PGANILLPKPGFPLYEANARHTRLEIRHFDLL 163 (421)
Q Consensus 88 ~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~----~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~ 163 (421)
...+++.+..++.+..|.+ +....++++|+|.+...++....+ +++.|+++..+|.+...++...|+++++++..
T Consensus 96 ~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 96 LNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEee
Confidence 4467777777777766643 233458888888444444434333 37999999999999999999999999888653
Q ss_pred C-CCCccCCHHHHHhhhcc---CceEEEEeCCC-CCcccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccccc
Q 014631 164 P-EKGWEVDLDGLEALADE---NTVAMVIVNPG-NPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVRMG 238 (421)
Q Consensus 164 ~-~~~~~~d~e~l~~~~~~---~~~~i~~~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 238 (421)
+ ++.+.+|++.+++++.+ +.+++++++|+ +.+|.+ +++++|+++|++||+++++|+||+......... +-.
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~---ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l-~~~ 250 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVP---DRLEELAVICANYDIPHVVNNAYGLQSSKCMHL-IQQ 250 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCC---CCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHH-HHH
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCcee---cCHHHHHHHHHHCCCeEEEECCCchhhhhhHhH-HHH
Confidence 2 33578999999998854 34566777774 556677 779999999999999999999998643211111 101
Q ss_pred cc--CCCCCEEEEcccccccCCCCceEEEEEeeCCCcchhHHHHHHHHhhhcccccCCchHHHHHHHHHhhccchhHHHH
Q 014631 239 VF--GSTVPVITLGSMSKRWIVPGWRLGWLVTSDPSGILQELRIVDSIKGYLNISSGPATFVQGAVPQIFKNTKEDFFSK 316 (421)
Q Consensus 239 ~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 316 (421)
.+ +.-| .++.|.+|++ ......+++.+++ ++..+++........+.++ ........+. ...+.+.+
T Consensus 251 a~~~~~AD--~~v~S~HK~l-~a~~~~~~l~~rd-------~~~~~~~~~~~~g~~s~Sp-sL~l~~~l~~-~G~~g~~~ 318 (450)
T 3bc8_A 251 GARVGRID--AFVQSLDKNF-MVPVGGAIIAGFN-------EPFIQDISKMYPGRASASP-SLDVLITLLS-LGCSGYRK 318 (450)
T ss_dssp HHHHSCCC--EEEEEHHHHH-SCCSSCEEEEESC-------HHHHHHHHHHSCSCBCSHH-HHHHHHHHHH-HHHHHHHH
T ss_pred HhcccCCC--EEEECCccCC-CchhccEEEEecC-------HHHHHHHHHHhhcCCcccH-HHHHHHHHHH-HHHHHHHH
Confidence 12 1111 5677999995 4445567777653 2344444333211112222 2222222232 23455666
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CccccCCCCceeEEEEecCcccccCCCChHHHHHHHHhhcC---eeEEe--------
Q 014631 317 IVDILRDTADICYDRIKEIP---CITCPRKPEGSMFVMVKLNLSLLEGISDDMEFALQLAKEES---VIVLP-------- 382 (421)
Q Consensus 317 ~~~~~~~~~~~~~~~l~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---v~v~~-------- 382 (421)
..++..++.+++.+.+++++ +..+...+..+.-..+.++........+...+...+ ...| .-+.+
T Consensus 319 ~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~~ 397 (450)
T 3bc8_A 319 LLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTVS 397 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEET
T ss_pred HHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccchh
Confidence 66666777888888887766 766443332221122223211000001234444443 3334 22321
Q ss_pred CC---CC------CCCCeEEEEec--CCHHHHHHHHHHHHHHHHHhhhc
Q 014631 383 GM---AV------GMKNWLRITFA--IEPSALEEGLGRIKAFCQRHAKQ 420 (421)
Q Consensus 383 g~---~~------~~~~~iRi~~~--~~~e~l~~~~~~l~~~~~~~~~~ 420 (421)
|. .| ....++=+.++ .+++++++++++|++++++++++
T Consensus 398 ~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 398 GHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp TEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 01 11 11345555444 89999999999999998877654
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=77.53 E-value=12 Score=35.88 Aligned_cols=110 Identities=21% Similarity=0.284 Sum_probs=64.8
Q ss_pred CCCCCcEEEcCCHHHHHHHHHHHhcC---C---------C-C-----eEEEcCCCCcc-------------------hHH
Q 014631 106 KLSPDDVYLTAGCKQAIQVILTVLAR---P---------G-A-----NILLPKPGFPL-------------------YEA 148 (421)
Q Consensus 106 ~~~~~~i~~~~g~~~al~~~~~~l~~---~---------g-d-----~Vl~~~p~y~~-------------------~~~ 148 (421)
.++++.|.++.++..++.-.+++|.+ . | . ..+.+.|.|.- +..
T Consensus 127 ~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id 206 (525)
T 3gh5_A 127 ITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKRQID 206 (525)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHHHHH
Confidence 45667888888877777666666532 1 1 1 12445566531 123
Q ss_pred HHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 149 NARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 149 ~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
.....+.+.-...+.++.+|.+..+...++-..... .......|-.++.+++++|++.|+++|+-||
T Consensus 207 ~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VI 273 (525)
T 3gh5_A 207 LASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVI 273 (525)
T ss_dssp HHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 333456666666666566666655444332211110 0011234667999999999999999999888
No 238
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=72.33 E-value=27 Score=25.84 Aligned_cols=99 Identities=10% Similarity=0.005 Sum_probs=61.6
Q ss_pred cEEEcCCHHHHHHHHHHH---hcC--CCCeEEEcCCCCcchHHHHhhcCcee---EeeeccCCCCccCCHHHHHhhhccC
Q 014631 111 DVYLTAGCKQAIQVILTV---LAR--PGANILLPKPGFPLYEANARHTRLEI---RHFDLLPEKGWEVDLDGLEALADEN 182 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~---l~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~e~l~~~~~~~ 182 (421)
+++....+...+.++... +.+ .+..|+...|.+..+.......|... ..+... +-.-.+..+|++++.+
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~---~~~d~lwa~EqaLrsg 82 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAK---DNAAALALSCEALRLG 82 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCS---SHHHHHHHHHHHHHHT
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECC---CcHHHHHHHHHHHhcC
Confidence 455555555555555544 343 55678777888888888888888753 444321 1111356668888877
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
....++..+.. ++..+.+++--.|++-+.+
T Consensus 83 ~~~aVl~wl~~-----l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 83 RSHTVVSWLEP-----LSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp CEEEEEECCSS-----CCHHHHHHHHHHHHHHTCE
T ss_pred CccEEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 76666665432 5667788887777766554
No 239
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=71.47 E-value=14 Score=32.12 Aligned_cols=96 Identities=13% Similarity=0.111 Sum_probs=53.9
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceE
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVA 185 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~ 185 (421)
-+++|.++..-=..+.+.|.+.|-+|++.+-.-......+...|.+...+..|-. |.+++++.++. ...-
T Consensus 31 valVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 31 IAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSCEE
T ss_pred EEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 3455555444444455667788988887654433344555566777777765533 45555554432 2223
Q ss_pred EEEeCC-CCCccc--ccCHHHHHHHHHHH
Q 014631 186 MVIVNP-GNPCGN--VFTYQQLQKIAEKA 211 (421)
Q Consensus 186 i~~~~p-~nptG~--~~~~~~l~~i~~~~ 211 (421)
+++.|. .++.+- -++.++++++.++-
T Consensus 106 iLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 106 VLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp EEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 445554 333332 36778888888754
No 240
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=70.62 E-value=37 Score=26.66 Aligned_cols=99 Identities=10% Similarity=0.017 Sum_probs=61.7
Q ss_pred cEEEcCCHHHHHHHHHHHh---cC--CCCeEEEcCCCCcchHHHHhhcCcee---EeeeccCCCCccCCHHHHHhhhccC
Q 014631 111 DVYLTAGCKQAIQVILTVL---AR--PGANILLPKPGFPLYEANARHTRLEI---RHFDLLPEKGWEVDLDGLEALADEN 182 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l---~~--~gd~Vl~~~p~y~~~~~~~~~~g~~~---~~~~~~~~~~~~~d~e~l~~~~~~~ 182 (421)
+++....+...+.++...+ .+ .+..|+...|-+..+.......|... ..+..... .-.+...|++++.+
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~---~daLwa~EqALrsG 124 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDN---AAALALSCEALRLG 124 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSST---THHHHHHHHHHHTT
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCCh---HHHHHHHHHHHhcC
Confidence 5665555544444444433 32 45677777777888888888888764 44432221 11356778888877
Q ss_pred ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcE
Q 014631 183 TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIM 217 (421)
Q Consensus 183 ~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 217 (421)
....++..... ++..+++++--.|++-+.+
T Consensus 125 ~~~aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~ 154 (161)
T 1oft_A 125 RSHTVVSWLEP-----LSRAARKQLSRAAQLGQAQ 154 (161)
T ss_dssp CEEEEEECCSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred CccEEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 77676765442 5667788887777765554
No 241
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=65.07 E-value=31 Score=29.02 Aligned_cols=95 Identities=18% Similarity=0.112 Sum_probs=50.6
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|-+|++.+-.-..........+.++..+..+-. |.+++++.++. +.
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~i 81 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADIS-----DPGSVKALFAEIQALTGGI 81 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCCCC
Confidence 34666655544444555667778888887665443344444444666666655432 45555554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. .++.+++++..+
T Consensus 82 d~lv~nAg~~~~~~~~~~~~~~~~~~~~ 109 (247)
T 3rwb_A 82 DILVNNASIVPFVAWDDVDLDHWRKIID 109 (247)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44444333333332 346677766655
No 242
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=63.50 E-value=34 Score=29.48 Aligned_cols=96 Identities=11% Similarity=0.064 Sum_probs=50.8
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.+.. +
T Consensus 27 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 27 QRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS-----SAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 334666655544444555667778888877654433333444445656666665432 55555554431 3
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
..+++.+....+.+. ..+.+++++..+
T Consensus 102 iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 102 VDVLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp CCEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 444444333333332 356677776654
No 243
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=63.31 E-value=22 Score=33.91 Aligned_cols=106 Identities=20% Similarity=0.292 Sum_probs=57.9
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhcC----C--CC-----eEEEcCCCCc-------------c------hHHHHhhcCce
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLAR----P--GA-----NILLPKPGFP-------------L------YEANARHTRLE 156 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~~----~--gd-----~Vl~~~p~y~-------------~------~~~~~~~~g~~ 156 (421)
++++.|.++.++..++...+++|.+ . |. ..+.+.|.|. + +.......+.+
T Consensus 98 v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~KlN 177 (507)
T 2gjx_A 98 INDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKLN 177 (507)
T ss_dssp ESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTCC
T ss_pred EeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCCc
Confidence 4556788887777777666666532 1 21 1233345542 1 12222334455
Q ss_pred eEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
.....+.++.+|.+..+...++.... ...|.|-.++.+++++|++.|+++|+-||-
T Consensus 178 ~lh~HltDdq~wr~ei~~~P~Lt~~G--------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 178 VFHWHLVDDPSFPYESFTFPELMRKG--------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp EEEEECCCSSCCCBCCSSCTHHHHHH--------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred eEEEEEecccCeeeeccccchhhhcc--------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 55555444445544332221111000 012345679999999999999999998883
No 244
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=61.51 E-value=40 Score=28.48 Aligned_cols=95 Identities=14% Similarity=0.055 Sum_probs=42.6
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|-+|++.+-.-..........+.++..+..+-. |.+++++.++. +.
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~i 82 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVT-----NEADATAALAFAKQEFGHV 82 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34566655544444455667778888777654433333344444555555554432 45555554431 34
Q ss_pred eEEEEeCCCCCccc------ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN------VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~------~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 83 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~ 114 (257)
T 3tpc_A 83 HGLVNCAGTAPGEKILGRSGPHALDSFARTVA 114 (257)
T ss_dssp CEEEECCCCCCCCCSEETTEECCHHHHHHHHH
T ss_pred CEEEECCCCCCCCccccccccCCHHHHHHHHH
Confidence 44443332222221 245567766655
No 245
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=60.95 E-value=38 Score=29.04 Aligned_cols=95 Identities=12% Similarity=0.050 Sum_probs=49.2
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.|+..-=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+.+++.+.. +.
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~g~i 80 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVT-----DGERIDVVAADVLARYGRV 80 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCC-----CHHHHHHHHHHHHHhCCCC
Confidence 34666655544444455667778888877665444445555555555666655432 45555554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (281)
T 3m1a_A 81 DVLVNNAGRTQVGAFEETTERELRDLFE 108 (281)
T ss_dssp SEEEECCCCEEECCTTTCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 44544333222222 345566555444
No 246
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=59.42 E-value=41 Score=28.43 Aligned_cols=95 Identities=11% Similarity=0.050 Sum_probs=49.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.+...+..+-. |.+++++.+.. +.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 83 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVT-----RQDSIDAAIAATVEHAGGL 83 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHSSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCC-----CHHHHHHHHHHHHHHcCCC
Confidence 45666666544444555667778888877654433334444444555555555432 55555554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 84 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 84 DILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp CEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 44444333322222 346677665544
No 247
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=58.26 E-value=77 Score=26.66 Aligned_cols=99 Identities=17% Similarity=0.198 Sum_probs=56.7
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEc---CC------CC-----cchHHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLP---KP------GF-----PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~---~p------~y-----~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
-+++.+||..+..++..+. +.|-.|... -+ .| ......+...|.+...+++..+.+ --.+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~-~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~--~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAI-KNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKE--KEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHH-HTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHH-HcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCch--HHHHHHH
Confidence 4667788887777766554 456544321 11 11 123566778898877777643211 2356666
Q ss_pred hhhcc-CceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 177 ALADE-NTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 177 ~~~~~-~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
++++. +..+++ +|.+.+...+..+-.+|.+.|+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 66654 334443 7777777778888888989887766
No 248
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=57.41 E-value=38 Score=28.89 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=48.6
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
...+++|.++...=..+.+.|.+.|..|++..-.-..........+.++..+..+-. |.+++++.++. +
T Consensus 27 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 101 (266)
T 3grp_A 27 GRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLS-----DRKSIKQLAEVAEREMEG 101 (266)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTT-----SHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecC-----CHHHHHHHHHHHHHHcCC
Confidence 345666665544444555667778888877654333334444555666666665432 55555554431 3
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
..+++.+......+. ..+.+++++..+
T Consensus 102 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (266)
T 3grp_A 102 IDILVNNAGITRDGLFVRMQDQDWDDVLA 130 (266)
T ss_dssp CCEEEECCCCC-----CCCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 444443333222222 244455655544
No 249
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=57.30 E-value=37 Score=29.19 Aligned_cols=95 Identities=13% Similarity=0.028 Sum_probs=48.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-.-..........+.++..+..|-. |.+++++.++. +.
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~i 104 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVS-----DEQQIIAMVDACVAAFGGV 104 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT-----CHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34566655544334455667778888877654333334444444656666665432 45555544431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 105 D~lvnnAg~~~~~~~~~~~~~~~~~~~~ 132 (277)
T 3gvc_A 105 DKLVANAGVVHLASLIDTTVEDFDRVIA 132 (277)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44443333322222 346677766554
No 250
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=57.05 E-value=80 Score=26.48 Aligned_cols=65 Identities=14% Similarity=-0.055 Sum_probs=35.2
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++...=..+++.|.+.|.+|++..-.-..........+.++..+..+-. |.+++++.+
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 77 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT-----SEKDVQTAL 77 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCC-----CHHHHHHHH
Confidence 45666655544444555666677877776544333334444444555666655432 455555544
No 251
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=56.10 E-value=25 Score=30.52 Aligned_cols=67 Identities=25% Similarity=0.227 Sum_probs=38.8
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
...+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+.+++.+.
T Consensus 16 gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~ 82 (291)
T 3rd5_A 16 QRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-----DLSSVRRFAD 82 (291)
T ss_dssp TCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT-----CHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-----CHHHHHHHHH
Confidence 345666665544444555667778888877654333334444455666666665432 6667766654
No 252
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=55.55 E-value=75 Score=27.03 Aligned_cols=95 Identities=17% Similarity=0.039 Sum_probs=50.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.|+..-=..+.+.|.+.|.+|++.+-.-..........+.+...+..+-. |.+.+++.++. +.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~i 86 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT-----NEVSVRALIDFTIDTFGRL 86 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666665544444555667778888877665544455555555656666655432 45555554431 34
Q ss_pred eEEEEeCCCC-C-cc--cccCHHHHHHHHH
Q 014631 184 VAMVIVNPGN-P-CG--NVFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~n-p-tG--~~~~~~~l~~i~~ 209 (421)
.+++.+.... + .+ ..++.+++++..+
T Consensus 87 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 87 DIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 4444333322 2 21 1346666666544
No 253
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=55.03 E-value=69 Score=27.25 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=51.9
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhc----c
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD----E 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----~ 181 (421)
...+++|.++..-=..+.+.|.+.|-+|++.+-.-.... ......|.+...+..|-. |.+++++.++ .
T Consensus 9 gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 9 GKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLDAE 83 (255)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHHHT
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHHHH
Confidence 334555655554445555677788988888654322222 223345667777665433 4455544432 2
Q ss_pred -CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014631 182 -NTVAMVIVNP-GNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 -~~~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 210 (421)
...-+++.|. .++.+. -++.++++++.++
T Consensus 84 ~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 84 GIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 1222445554 333332 3677888887764
No 254
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=54.88 E-value=31 Score=28.69 Aligned_cols=103 Identities=13% Similarity=0.106 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
+|+++..+.+.. ..|.++++..|.-.. -..++...|.....+++. +.+++.+.+..+...|++-..++
T Consensus 42 TT~Llr~~~r~~-~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~-------~~~di~~~i~~~~dvV~IDEaQF- 112 (219)
T 3e2i_A 42 SEELIRRLRRGI-YAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINIS-------KASEIMTHDLTNVDVIGIDEVQF- 112 (219)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEEC-----------CBTTBCCEEEEES-------SGGGGGGSCCTTCSEEEECCGGG-
T ss_pred HHHHHHHHHHHH-HcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeC-------CHHHHHHHHhcCCCEEEEechhc-
Confidence 455666654443 456677777654432 234555667665555543 22344444444566777777666
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 236 (421)
++.+.++.+.+++ ..|+.+|+=.--.+|. +.++..
T Consensus 113 ----f~~~~v~~l~~la-~~gi~Vi~~GLd~DF~--~~~F~~ 147 (219)
T 3e2i_A 113 ----FDDEIVSIVEKLS-ADGHRVIVAGLDMDFR--GEPFEP 147 (219)
T ss_dssp ----SCTHHHHHHHHHH-HTTCEEEEEEESBCTT--SCBCTT
T ss_pred ----CCHHHHHHHHHHH-HCCCEEEEeecccccc--cCCCcc
Confidence 5556677777777 5799999876666643 555544
No 255
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=54.39 E-value=51 Score=27.81 Aligned_cols=95 Identities=11% Similarity=0.044 Sum_probs=50.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.+.. +.
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~i 83 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA-----DLNEIAVLGAAAGQTLGAI 83 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSSE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHHHHhCCC
Confidence 45666666554445556667778888877654433334444444556666665432 45555543321 33
Q ss_pred eEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014631 184 VAMVIVNP-GNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 184 ~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 210 (421)
.++ +.+. ..+.+. .++.+++++..++
T Consensus 84 d~l-v~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 84 DLL-HINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp EEE-EECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 333 4433 222222 2466777766653
No 256
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=54.32 E-value=90 Score=26.18 Aligned_cols=96 Identities=13% Similarity=-0.024 Sum_probs=48.5
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++.+-.-...... ....|.++..+..|-. |.+++++.+..
T Consensus 7 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 81 (252)
T 3h7a_A 7 NATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADAH 81 (252)
T ss_dssp SCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHhh
Confidence 34566666655444455566777888887765433333222 2334667777766533 45555544421
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 82 APLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp SCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2333333322322222 355666665544
No 257
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=53.93 E-value=34 Score=32.65 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=22.3
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEE
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li 219 (421)
|-.++.+++++|++.|+++|+-||
T Consensus 214 ~~~YT~~di~eiv~yA~~rgI~VI 237 (507)
T 1now_A 214 SHVYTPNDVRMVIEYARLRGIRVL 237 (507)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCEEE
Confidence 567899999999999999999888
No 258
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=53.30 E-value=56 Score=27.38 Aligned_cols=95 Identities=14% Similarity=0.038 Sum_probs=47.2
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-..........+.+...+..+-. |.+++++.++. +.
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~i 84 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVT-----NPESIEAVLKAITDEFGGV 84 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCC-----CHHHHHHHHHHHHHHcCCC
Confidence 44666665544444455667778888877654333333333333434445554332 55555554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. .++.+++++..+
T Consensus 85 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 85 DILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp SEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44443333322222 346677766554
No 259
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=53.25 E-value=44 Score=28.65 Aligned_cols=65 Identities=11% Similarity=0.019 Sum_probs=36.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+.+++.+
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~ 95 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVT-----SEDSVLAAI 95 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHH
Confidence 34666655544444555667778888877654333334444445656666665432 445554433
No 260
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=52.87 E-value=46 Score=27.69 Aligned_cols=95 Identities=8% Similarity=0.065 Sum_probs=46.3
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV 184 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~ 184 (421)
.+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.+.. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA-----HHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----SHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC-----CHHHHHHHHHHHHHhcCCCc
Confidence 4566655544444445566678888877654333333333333334555554432 44555544321 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 185 AMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 185 ~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+++.+....+.+. ..+.+++++..++
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 5544433332222 2466777766553
No 261
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=52.21 E-value=27 Score=27.03 Aligned_cols=59 Identities=22% Similarity=0.192 Sum_probs=37.8
Q ss_pred ccCCHHHHHhhhcc-CceEEEEeCCCCCcccccC-HHHHHHHH-HHHHhcCc-EEEEcccccc
Q 014631 168 WEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT-YQQLQKIA-EKARKLGI-MVISDEVYDH 226 (421)
Q Consensus 168 ~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~-~~~l~~i~-~~~~~~~~-~li~De~~~~ 226 (421)
...+.+.|.+.+.+ ++..+++-.|-|.-|..-. ....+.++ .++++.++ +.++||.++.
T Consensus 40 ~~~~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 40 GDYGLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp TBCCHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred hHHHHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 34578889988876 5677888889666555421 13334555 44445676 4558999875
No 262
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=52.19 E-value=68 Score=26.96 Aligned_cols=96 Identities=10% Similarity=-0.010 Sum_probs=49.3
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.++. +
T Consensus 9 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 83 (261)
T 3n74_A 9 GKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADIS-----KEADVDAAVEAALSKFGK 83 (261)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHhcCC
Confidence 345666665544444555666678888877654443334444455656666665432 44555444321 3
Q ss_pred ceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPG-NPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 209 (421)
...++.+... .+.+. ..+.+++++..+
T Consensus 84 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 113 (261)
T 3n74_A 84 VDILVNNAGIGHKPQNAELVEPEEFDRIVG 113 (261)
T ss_dssp CCEEEECCCCCCCSCCGGGSCHHHHHHHHH
T ss_pred CCEEEECCccCCCCCCcccCCHHHHHHHHH
Confidence 4444443332 21222 246666666544
No 263
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=52.17 E-value=34 Score=28.31 Aligned_cols=95 Identities=11% Similarity=-0.002 Sum_probs=49.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---CceEEE
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---NTVAMV 187 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---~~~~i~ 187 (421)
.+++|.|+...=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+.+++.+.. ....++
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~d~lv 77 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLA-----SHQEVEQLFEQLDSIPSTVV 77 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTT-----CHHHHHHHHHSCSSCCSEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCC-----CHHHHHHHHHHHhhcCCEEE
Confidence 3566666554444555666677877777654433334444444555555554432 56666665532 224443
Q ss_pred EeCCCCCccc--ccCHHHHHHHHHH
Q 014631 188 IVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 188 ~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
.+....+.+. ..+.+++++..++
T Consensus 78 ~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 78 HSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp ECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EeCCcCCCCccccCCHHHHHHHHHH
Confidence 3333333332 3566777666553
No 264
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=50.91 E-value=30 Score=30.25 Aligned_cols=22 Identities=0% Similarity=0.123 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhcCcEEEEcc
Q 014631 201 YQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De 222 (421)
.+.++++++.|.++|+++|+|-
T Consensus 64 ~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 64 PSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 5889999999999999999984
No 265
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=50.83 E-value=72 Score=27.02 Aligned_cols=96 Identities=10% Similarity=-0.033 Sum_probs=53.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCC-cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~ 189 (421)
-+++|.++..-=..+.+.|.+.|-+|++.+-.- ..........|.+...+..+-. |.+++++.+.....-+++.
T Consensus 11 valVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iDiLVN 85 (247)
T 4hp8_A 11 KALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFDILVN 85 (247)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCCEEEE
T ss_pred EEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCCEEEE
Confidence 445555554444445566778887777754321 1234445567777777766543 3344444444433335555
Q ss_pred CC-CCCcc--cccCHHHHHHHHHHH
Q 014631 190 NP-GNPCG--NVFTYQQLQKIAEKA 211 (421)
Q Consensus 190 ~p-~nptG--~~~~~~~l~~i~~~~ 211 (421)
|. ..+.+ .-++.++|+++.++-
T Consensus 86 NAGi~~~~~~~~~~~~~w~~~~~vN 110 (247)
T 4hp8_A 86 NAGIIRRADSVEFSELDWDEVMDVN 110 (247)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred CCCCCCCCCcccccHHHHHHHHHHH
Confidence 55 23333 236788888887753
No 266
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=50.67 E-value=68 Score=27.12 Aligned_cols=93 Identities=15% Similarity=0.097 Sum_probs=49.6
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV 184 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~ 184 (421)
.+++|.|+..-=..+.+.|.+.|-+|++.+-.-.......+ .+.+...+..+-. |.+++++.++. +..
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-ERPNLFYFHGDVA-----DPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-TCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-hcCCEEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 35666665555455566777889888776543322222222 3445556655432 45555544421 233
Q ss_pred EEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014631 185 AMVIVNP-GNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 185 ~i~~~~p-~nptG~--~~~~~~l~~i~~~ 210 (421)
+++.|. .++.+. .++.++++++.++
T Consensus 78 -iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 -VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp -EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred -EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 445444 333343 3577888877664
No 267
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=50.67 E-value=26 Score=33.44 Aligned_cols=110 Identities=20% Similarity=0.336 Sum_probs=61.0
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhcC---C---------CC-----eEEEcCCCCcc-------------------hHHHH
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLAR---P---------GA-----NILLPKPGFPL-------------------YEANA 150 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~~---~---------gd-----~Vl~~~p~y~~-------------------~~~~~ 150 (421)
++++.|.++.++..++.-.+++|.+ . |. ..+.+.|.|.- +....
T Consensus 104 v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~m 183 (512)
T 1jak_A 104 SGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDRV 183 (512)
T ss_dssp EETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHH
T ss_pred EeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHHH
Confidence 4556788887777666666655531 1 11 12444565531 12223
Q ss_pred hhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 151 RHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 151 ~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
...+.+.....+.++.+|.+.++...++...... .......|-.++.+++++|++.|+++|+-||-
T Consensus 184 a~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 184 ARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 3445555555555555566554443332211110 01112236789999999999999999999883
No 268
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=49.68 E-value=1.1e+02 Score=25.41 Aligned_cols=95 Identities=20% Similarity=0.123 Sum_probs=46.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCC-cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc------cC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------EN 182 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------~~ 182 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.- ..........+.++..+..+-. |.+++++.++ .+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 82 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVISTFGR 82 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHHHHcCC
Confidence 3466665554444455566667887777654322 2222223334555666655432 4555555432 13
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
..+++.+....+.+. ..+.+++++..+
T Consensus 83 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 83 CDILVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 444443333222222 245566665544
No 269
>3l5o_A Uncharacterized protein from DUF364 family; RARE metals, siderophores, adenosyl binding site; 2.01A {Desulfitobacterium hafniense}
Probab=49.41 E-value=25 Score=30.36 Aligned_cols=74 Identities=14% Similarity=0.078 Sum_probs=47.8
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~ 211 (421)
.|++|.+.- |.+........+.++..+..++..+. ...++-+..+ +....+++ ||+.+-...+..|.++|
T Consensus 140 ~g~kV~vIG--~fP~i~~~~~~~~~l~V~E~~p~~g~-~p~~~~~~~l-p~~D~vii------TgstlvN~Tl~~lL~~~ 209 (270)
T 3l5o_A 140 KGKKVGVVG--HFPHLESLLEPICDLSILEWSPEEGD-YPLPASEFIL-PECDYVYI------TCASVVDKTLPRLLELS 209 (270)
T ss_dssp TTSEEEEES--CCTTHHHHHTTTSEEEEEESSCCTTC-EEGGGHHHHG-GGCSEEEE------ETHHHHHTCHHHHHHHT
T ss_pred CCCEEEEEC--CchhHHHHHhcCCCEEEEECCCCCCC-CChhHHHHhh-ccCCEEEE------EeehhhcCCHHHHHhhC
Confidence 567888775 44666666667888888887775442 1122333344 34555554 77777777799999999
Q ss_pred HhcC
Q 014631 212 RKLG 215 (421)
Q Consensus 212 ~~~~ 215 (421)
++..
T Consensus 210 ~~a~ 213 (270)
T 3l5o_A 210 RNAR 213 (270)
T ss_dssp TTSS
T ss_pred CCCC
Confidence 7643
No 270
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=48.70 E-value=71 Score=27.03 Aligned_cols=94 Identities=10% Similarity=-0.046 Sum_probs=44.9
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
...+++|.++...=..+.+.|.+.|.+|++..-.-..........+.. .+..+-. |.+++++.++. +
T Consensus 27 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 99 (260)
T 3gem_A 27 SAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAV--ALYGDFS-----CETGIMAFIDLLKTQTSS 99 (260)
T ss_dssp CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCE--EEECCTT-----SHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCe--EEECCCC-----CHHHHHHHHHHHHHhcCC
Confidence 345777766554444555667777877776544333333333444543 3433322 45555544431 3
Q ss_pred ceEEEEeCCCC-CcccccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGN-PCGNVFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~n-ptG~~~~~~~l~~i~~ 209 (421)
..+++.+.... +.....+.+++++..+
T Consensus 100 iD~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (260)
T 3gem_A 100 LRAVVHNASEWLAETPGEEADNFTRMFS 127 (260)
T ss_dssp CSEEEECCCCCCCCCTTCHHHHHHHHHH
T ss_pred CCEEEECCCccCCCCCCCCHHHHHHHHH
Confidence 44444333322 2223344455555544
No 271
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=48.59 E-value=47 Score=28.99 Aligned_cols=50 Identities=12% Similarity=0.144 Sum_probs=34.9
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-.+.++++++.+.+.+++.. +|. +.++.+++.+.|+++++.++-..+.+.
T Consensus 83 ~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~Gi 132 (294)
T 2yv1_A 83 AKDAVFEAIDAGIELIVVIT----EHI--PVHDTMEFVNYAEDVGVKIIGPNTPGI 132 (294)
T ss_dssp HHHHHHHHHHTTCSEEEECC----SCC--CHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCcee
Confidence 45666777777777555432 233 446789999999999998887776544
No 272
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=48.49 E-value=38 Score=30.27 Aligned_cols=77 Identities=16% Similarity=0.196 Sum_probs=46.2
Q ss_pred CCCcchHHHHhhc-CceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631 141 PGFPLYEANARHT-RLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 141 p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 218 (421)
|.|.+...+.... +..+..+-+++. .-.+.+.+.+. .+.+.+++.....| .++.+++.++|+++|+.+
T Consensus 65 pvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G~~------e~~~~~l~~~a~~~g~rl 134 (334)
T 3mwd_B 65 PVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIP------EALTRKLIKKADQKGVTI 134 (334)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCC------HHHHHHHHHHHHHHTCEE
T ss_pred eeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCCCC------HHHHHHHHHHHHHcCCEE
Confidence 5566666555443 345444333221 12456666665 66777766443322 367889999999999999
Q ss_pred EEccccccc
Q 014631 219 ISDEVYDHL 227 (421)
Q Consensus 219 i~De~~~~~ 227 (421)
|==.+.+.+
T Consensus 135 iGPNc~Gii 143 (334)
T 3mwd_B 135 IGPATVGGI 143 (334)
T ss_dssp ECSSCCCEE
T ss_pred EccCCcccc
Confidence 866555443
No 273
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=47.62 E-value=42 Score=19.92 Aligned_cols=27 Identities=11% Similarity=0.030 Sum_probs=22.5
Q ss_pred eEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 391 WLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 391 ~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
.+|||+. .+..+-+++.+.|.+++.++
T Consensus 3 rvrisitartkkeaekfaailikvfael 30 (62)
T 2gjh_A 3 RVRISITARTKKEAEKFAAILIKVFAEL 30 (62)
T ss_dssp EEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred eEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 5799997 78888899999888887765
No 274
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=47.59 E-value=28 Score=30.33 Aligned_cols=50 Identities=12% Similarity=0.147 Sum_probs=35.0
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-.+.++++++.+.+.+++... |. +.++.+++.+.|+++|+.++-....+.
T Consensus 77 ~~~~~~ea~~~Gi~~iVi~t~----G~--~~~~~~~l~~~A~~~gv~liGPNc~Gi 126 (288)
T 2nu8_A 77 CKDSILEAIDAGIKLIITITE----GI--PTLDMLTVKVKLDEAGVRMIGPNTPGV 126 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHHHHTCEEECSSCCEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----CC--CHHHHHHHHHHHHHcCCEEEecCCcce
Confidence 466677777777776554333 33 457788999999999998886665443
No 275
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=47.50 E-value=91 Score=26.14 Aligned_cols=95 Identities=15% Similarity=0.010 Sum_probs=45.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+++++.++. +.
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 80 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVT-----IEEDWQRVVAYAREEFGSV 80 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666655444444455666678888776543222222333333445555554432 45555554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+......+. ..+.+++++..+
T Consensus 81 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (254)
T 1hdc_A 81 DGLVNNAGISTGMFLETESVERFRKVVE 108 (254)
T ss_dssp CEEEECCCCCCCSCGGGSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44443333222221 245566655443
No 276
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=46.79 E-value=1.1e+02 Score=25.65 Aligned_cols=95 Identities=8% Similarity=-0.030 Sum_probs=45.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.+.. +.
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 81 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS-----SEADWTLVMAAVQRRLGTL 81 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTT-----CHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666655444444455566677888877654322222333333545555554332 45555554432 23
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 82 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 82 NVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44443333222222 245566665554
No 277
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=46.40 E-value=1e+02 Score=26.26 Aligned_cols=96 Identities=10% Similarity=0.019 Sum_probs=49.1
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
...+++|.++...=..+.+.|.+.|.+|++..-.-....... ...|.++..+..|-. |.+++++.+..
T Consensus 26 gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 100 (271)
T 4ibo_A 26 GRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT-----SESEIIEAFARLDEQ 100 (271)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 345666666554444556667778888888654333222222 234556666655432 55555554432
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. .++.+++++..+
T Consensus 101 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 132 (271)
T 4ibo_A 101 GIDVDILVNNAGIQFRKPMIELETADWQRVID 132 (271)
T ss_dssp TCCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCCchhCCHHHHHHHHH
Confidence 3444443333222222 346677766654
No 278
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=46.12 E-value=1.2e+02 Score=25.30 Aligned_cols=94 Identities=17% Similarity=0.037 Sum_probs=45.3
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc-hHHHHhhc----CceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL-YEANARHT----RLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~----g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
.+++|.++...=..+.+.|.+.|.+|++..-.-.. ........ |.++..+..+-. |.+++++.+..
T Consensus 6 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 6 VAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLS-----KGEAVRGLVDNAVRQ 80 (260)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTT-----SHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCC-----CHHHHHHHHHHHHHh
Confidence 45666555444444555666788888776543322 22222111 555555554432 45555554432
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 81 ~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 112 (260)
T 1x1t_A 81 MGRIDILVNNAGIQHTALIEDFPTEKWDAILA 112 (260)
T ss_dssp HSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443333222221 245566665544
No 279
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=46.08 E-value=1.4e+02 Score=25.36 Aligned_cols=95 Identities=13% Similarity=0.018 Sum_probs=47.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----Cc
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NT 183 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~ 183 (421)
-+++|.++..-=..+...|.+.|-.|++..-.-.. ........+.+...+..+-. |.+++++.+.+ ..
T Consensus 9 valVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~G~ 83 (258)
T 4gkb_A 9 VVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTIATFGR 83 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHHHHhCC
Confidence 34555444433344455677788776665422221 22233345666666665533 44454443321 22
Q ss_pred eEEEEeCC--CCCcccccCHHHHHHHHHH
Q 014631 184 VAMVIVNP--GNPCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 184 ~~i~~~~p--~nptG~~~~~~~l~~i~~~ 210 (421)
.-+++.|. +.+...-.+.+++++..++
T Consensus 84 iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 84 LDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp CCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 22445554 2233345677778777654
No 280
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=46.05 E-value=55 Score=28.00 Aligned_cols=96 Identities=16% Similarity=0.066 Sum_probs=48.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc------------c---hHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP------------L---YEANARHTRLEIRHFDLLPEKGWEVDLDG 174 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~------------~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~ 174 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-... . ........+.++..+..+-. |.++
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~ 85 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR-----DRAA 85 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC-----CHHH
Confidence 34566655544444555667778888777543211 0 01122334556666665432 4555
Q ss_pred HHhhhcc------CceEEEEeCCCCCcccccCHHHHHHHHHH
Q 014631 175 LEALADE------NTVAMVIVNPGNPCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 175 l~~~~~~------~~~~i~~~~p~nptG~~~~~~~l~~i~~~ 210 (421)
+++.+.. +..+++.+....+.+...+.+++++..++
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 86 VSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhh
Confidence 5544431 34444433333333333566777766553
No 281
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=45.86 E-value=77 Score=27.06 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=47.3
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV 184 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~ 184 (421)
.+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.++. +..
T Consensus 30 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~iD 104 (272)
T 4dyv_A 30 IAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT-----DPDSVRALFTATVEKFGRVD 104 (272)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT-----SHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 3555555444334455667778888877654333334444444555666655432 45555554431 344
Q ss_pred EEEEeCCC-CCccc--ccCHHHHHHHHH
Q 014631 185 AMVIVNPG-NPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 185 ~i~~~~p~-nptG~--~~~~~~l~~i~~ 209 (421)
+++.+... .+.+. .++.+++++..+
T Consensus 105 ~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 132 (272)
T 4dyv_A 105 VLFNNAGTGAPAIPMEDLTFAQWKQVVD 132 (272)
T ss_dssp EEEECCCCCCCSSCGGGCCHHHHHHHHH
T ss_pred EEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 44333322 22222 346677766554
No 282
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=45.85 E-value=1e+02 Score=25.54 Aligned_cols=95 Identities=13% Similarity=0.083 Sum_probs=47.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++....-.... ......+.++..+..+-. |.+.+++.++.
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 80 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS-----DIESIQNFFAEIKAEN 80 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHTT
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHHc
Confidence 34666665544444455666677888777654332222 222334666666665432 45555544321
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+...++.+....+.+. ..+.+++++..+
T Consensus 81 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 81 LAIDILVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp CCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2344444333322222 345666665554
No 283
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=45.56 E-value=1.1e+02 Score=25.59 Aligned_cols=95 Identities=11% Similarity=-0.009 Sum_probs=44.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-.-............++..+..+-. |.+.+++.+.. +.
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~~~~~~~~~g~i 87 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVT-----KRASVDAAMQKAIDALGGF 87 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTT-----CHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666655544444455666678888777543222222222222223444444322 45566554432 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+++.+......+ ...+.+++++..+
T Consensus 88 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (263)
T 3ak4_A 88 DLLCANAGVSTMRPAVDITDEEWDFNFD 115 (263)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 4454433322222 2245566665554
No 284
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.30 E-value=1.1e+02 Score=25.92 Aligned_cols=94 Identities=18% Similarity=0.088 Sum_probs=46.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------ 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------ 181 (421)
.+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+..
T Consensus 6 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 80 (264)
T 3tfo_A 6 VILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAVDTWG 80 (264)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHcC
Confidence 355555544433445556667888877764332222222 2234666666665432 45555554421
Q ss_pred CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. .++.+++++..+
T Consensus 81 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 110 (264)
T 3tfo_A 81 RIDVLVNNAGVMPLSPLAAVKVDEWERMID 110 (264)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444443333333332 246677766554
No 285
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=45.27 E-value=1.1e+02 Score=24.98 Aligned_cols=94 Identities=15% Similarity=0.141 Sum_probs=48.1
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
.+++|.|+...=..+.+.|.+.|.+|++..-......... ...+.++..+..|-. |.+++++.+..
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVS-----KAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccC-----CHHHHHHHHHHHHHhc
Confidence 3566655544334455666678877777654332222222 134566666665432 56666665542
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+...++.+....+.+. ..+.+++++..+
T Consensus 79 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (235)
T 3l77_A 79 GDVDVVVANAGLGYFKRLEELSEEEFHEMIE 109 (235)
T ss_dssp SSCSEEEECCCCCCCCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCccccccCcccCCHHHHHHHHH
Confidence 3444544333333332 246666766554
No 286
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=45.20 E-value=85 Score=26.65 Aligned_cols=95 Identities=8% Similarity=-0.009 Sum_probs=51.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----C
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----N 182 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~ 182 (421)
-+++|.|+..-=..+.+.|.+.|-+|++.+-.-.... ..++..|.+...+..|-. |.+++++.++. .
T Consensus 9 valVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 9 VVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFETYS 83 (254)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHHS
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHcC
Confidence 3455554444334445566778888877654332222 223445777777776543 45555554432 2
Q ss_pred ceEEEEeCC--CCCcc--cccCHHHHHHHHHH
Q 014631 183 TVAMVIVNP--GNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 183 ~~~i~~~~p--~nptG--~~~~~~~l~~i~~~ 210 (421)
..-+++.|. ..+.+ .-++.++++++.++
T Consensus 84 ~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 84 RIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp CCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 222445554 22333 23677888877764
No 287
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=45.02 E-value=1.2e+02 Score=25.74 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=48.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.|+...=..+.+.|.+.|.+|++..-.-....... ...|.++..+..+-. |.+++++.+..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 102 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALKE 102 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 34566655544444556667788888877654332222222 223556666665432 45555544431
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
+..+++.+......+ ..++.+++++..++
T Consensus 103 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 103 FGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 344444333222222 22566777766553
No 288
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=44.23 E-value=66 Score=32.85 Aligned_cols=113 Identities=19% Similarity=0.293 Sum_probs=63.2
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhc---CCC-C-e----EEEcCCCCc-------------c------hHHHHhhcCceeE
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLA---RPG-A-N----ILLPKPGFP-------------L------YEANARHTRLEIR 158 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~---~~g-d-~----Vl~~~p~y~-------------~------~~~~~~~~g~~~~ 158 (421)
++++.|.++.++..++...+++|. ..+ . . .+...|.|. + +.......+.+..
T Consensus 266 v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~l 345 (858)
T 1c7s_A 266 IGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNKF 345 (858)
T ss_dssp ECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcEE
Confidence 456678888777776666666553 222 2 1 233456553 1 1233344566666
Q ss_pred eeeccCCCCccCCHHHHHhhhccCceEE------EEeCC---C--CCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 159 HFDLLPEKGWEVDLDGLEALADENTVAM------VIVNP---G--NPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 159 ~~~~~~~~~~~~d~e~l~~~~~~~~~~i------~~~~p---~--nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
...+.++.+|.+.++.+.++......-- -...| + .+.|-.++.+++++|++.|+++|+-||
T Consensus 346 h~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VI 417 (858)
T 1c7s_A 346 HFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVI 417 (858)
T ss_dssp EEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEE
T ss_pred EEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 6666555566665444433211100000 00011 1 134678999999999999999999888
No 289
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=43.93 E-value=1.2e+02 Score=25.71 Aligned_cols=96 Identities=15% Similarity=0.144 Sum_probs=46.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-....... ...|.++..+..+-. |.+++++++..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 96 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEAVKEK 96 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 34666655544444455666678878777543322222222 223555666655432 45555554431
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
+..+++.+......+ ...+.++++++.++
T Consensus 97 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 97 FGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 344444333322222 22466677666553
No 290
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=43.29 E-value=65 Score=26.85 Aligned_cols=69 Identities=7% Similarity=0.027 Sum_probs=36.7
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
....+++|.++..-=..+.+.|.+.|.+|++..-.-..........+..+..+..+. -+.+.+++.+.+
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 81 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISK 81 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHT
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHh
Confidence 344566766655444445566777888887765443333333333333444444332 256666666543
No 291
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=42.76 E-value=36 Score=28.96 Aligned_cols=48 Identities=21% Similarity=0.365 Sum_probs=35.0
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
|-+|.-++.++..-+..++++... .++.++++++.+.|++.|+.+++|
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvE 156 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVE 156 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 556666776655556666654332 467789999999999999998888
No 292
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=42.65 E-value=1.1e+02 Score=23.24 Aligned_cols=103 Identities=13% Similarity=0.158 Sum_probs=60.1
Q ss_pred EEEcCCH--HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEe
Q 014631 112 VYLTAGC--KQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIV 189 (421)
Q Consensus 112 i~~~~g~--~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~ 189 (421)
++++-+. ...+..+.+.+.+-|=+++... +.....+..|.++..+.-..+++..-+...+.+.+..+...+++.
T Consensus 27 vliSv~d~dK~~l~~~a~~l~~lGf~i~AT~----GTa~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVIn 102 (143)
T 2yvq_A 27 ILIGIQQSFRPRFLGVAEQLHNEGFKLFATE----ATSDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVIN 102 (143)
T ss_dssp EEEECCGGGHHHHHHHHHHHHTTTCEEEEEH----HHHHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEEE
T ss_pred EEEEecccchHHHHHHHHHHHHCCCEEEECc----hHHHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEEE
Confidence 6666554 4555556666766777776655 334455668888777653332210000023555555554445565
Q ss_pred CCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 190 NPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 190 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
.|.. . .-+..+-..|.+.|-.||+.++..
T Consensus 103 t~~~-~--~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 103 LPNN-N--TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp CCCC-C--GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred CCCC-C--CcCCccHHHHHHHHHHhCCCeEcC
Confidence 5532 1 223578899999999999998854
No 293
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=42.45 E-value=98 Score=25.98 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=48.1
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++.+-.-..... .....+.++..+..+-. |.+.+++.+..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 86 (256)
T 3gaf_A 12 DAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT-----DEQHREAVIKAALDQ 86 (256)
T ss_dssp TCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 3456666555444445556666778888776543322222 22334666666665432 45555544431
Q ss_pred --CceEEEEeCCCC-CcccccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGN-PCGNVFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~n-ptG~~~~~~~l~~i~~ 209 (421)
+..+++.+.... +.....+.+++++..+
T Consensus 87 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 87 FGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 344444333322 2222456677766554
No 294
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=41.94 E-value=1.4e+02 Score=25.09 Aligned_cols=95 Identities=14% Similarity=0.027 Sum_probs=47.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.|+...=..+++.|.+.|.+|++..-.-...... ....+.++..+..+-. |.+.+++.+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAAH 104 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHhc
Confidence 3456665544433444556667888877765433222222 2234666666665432 45555554432
Q ss_pred -CceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPG-NPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+... .+.+. ..+.+++++..+
T Consensus 105 g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 105 GRCDVLVNNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp SCCSEEEECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred CCCCEEEECCCccCCCCCcccCCHHHHHHHHH
Confidence 34455444332 23332 246666666554
No 295
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=41.49 E-value=1.7e+02 Score=25.16 Aligned_cols=97 Identities=20% Similarity=0.117 Sum_probs=48.6
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh---hcC-ceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---HTR-LEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g-~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
...+++|.|+...=..+.+.|.+.|-+|++.+-.-........ ..+ .++..+..+-. |.+.+++.+..
T Consensus 41 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 115 (293)
T 3rih_A 41 ARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-----DPGSCADAARTVVD 115 (293)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC-----CHHHHHHHHHHHHH
Confidence 3346666555444445566677788888776544333333322 223 35555555432 45555544321
Q ss_pred ---CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+....+.+. .++.+++++..++
T Consensus 116 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 116 AFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344443333333332 3466777766653
No 296
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=41.47 E-value=48 Score=29.03 Aligned_cols=50 Identities=16% Similarity=0.211 Sum_probs=35.5
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
-.+.++++++.+.+.+++.. +|. +.++.+++.+.|+++++.++-..+.+.
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~A~~~gi~viGPNc~Gi 133 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVIT----EGI--PVHDTMRFVNYARQKGATIIGPNCPGA 133 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECC----CCC--CHHHHHHHHHHHHHHTCEEECSSSCEE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEcCCCCee
Confidence 46677777777788655432 232 446789999999999998887775544
No 297
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=41.21 E-value=1.7e+02 Score=24.92 Aligned_cols=97 Identities=10% Similarity=0.030 Sum_probs=49.0
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
....+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....+.++..+..+-. |.+++++.++.
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~ 105 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGMLDQMTG 105 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 344566666654444455566777888877765433332222 2334556666655432 55555554432
Q ss_pred ---CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.++++++.+
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 106 ELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444443333222222 346677765554
No 298
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=41.20 E-value=1.5e+02 Score=24.85 Aligned_cols=65 Identities=17% Similarity=0.184 Sum_probs=32.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh---c-CceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH---T-RLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~-g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-......... . +.++..+..+-. |.+++++.+
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~ 76 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVA-----TPEGVDAVV 76 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHH
Confidence 3466666554444445556667787877654322111111111 1 555666655432 455555544
No 299
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=41.18 E-value=1.4e+02 Score=24.66 Aligned_cols=94 Identities=12% Similarity=0.010 Sum_probs=44.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-..........| +..+..+-. |.+++++.+.. +.
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~--~~~~~~D~~-----~~~~~~~~~~~~~~~~g~i 78 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVG--AHPVVMDVA-----DPASVERGFAEALAHLGRL 78 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTT--CEEEECCTT-----CHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcC--CEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 346666554443344455666788887775432222223333334 333433322 45555554432 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 184 ~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
.+++.+....+.+ ...+.+++++..++
T Consensus 79 d~lvn~Ag~~~~~~~~~~~~~~~~~~~~~ 107 (245)
T 1uls_A 79 DGVVHYAGITRDNFHWKMPLEDWELVLRV 107 (245)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 4444333222222 22456677665553
No 300
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=41.18 E-value=1.3e+02 Score=25.28 Aligned_cols=95 Identities=14% Similarity=0.046 Sum_probs=43.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+.+++.+.. +.
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 82 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVT-----QPAQWKAAVDTAVTAFGGL 82 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666655444334455566677888777543222222222222223444444322 55565554431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+......+. ..+.+++++..+
T Consensus 83 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 110 (260)
T 1nff_A 83 HVLVNNAGILNIGTIEDYALTEWQRILD 110 (260)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 44544333222221 245566654443
No 301
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=40.94 E-value=1.1e+02 Score=26.05 Aligned_cols=94 Identities=12% Similarity=0.006 Sum_probs=46.8
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------ 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------ 181 (421)
.+++|.|+..-=..+.+.|.+.|.+|++..-.-...... +...|.++..+..+-. |.+++++.+..
T Consensus 26 ~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 100 (279)
T 3sju_A 26 TAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT-----STDEVHAAVAAAVERFG 100 (279)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHcC
Confidence 456665554444445566777888887765432222222 2234556666665432 55555554431
Q ss_pred CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+ ..++.+++++..+
T Consensus 101 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 101 PIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp SCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 334444333333223 2356677766554
No 302
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=40.65 E-value=1.5e+02 Score=24.32 Aligned_cols=96 Identities=9% Similarity=0.030 Sum_probs=45.1
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++..-.-......... .+.++..+..+-. |.+.+++.+..
T Consensus 7 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~ 81 (248)
T 2pnf_A 7 GKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLL-----SEESINKAFEEIYN 81 (248)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCC-----CHHHHHHHHHHHHH
Confidence 34566665554444445556667787777654322211111111 3545555554432 55666555431
Q ss_pred ---CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 82 ~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (248)
T 2pnf_A 82 LVDGIDILVNNAGITRDKLFLRMSLLDWEEVLK 114 (248)
T ss_dssp HSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHh
Confidence 3455544433222221 234555555443
No 303
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.64 E-value=1.3e+02 Score=25.99 Aligned_cols=95 Identities=19% Similarity=0.160 Sum_probs=47.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++...=..+++.|.+.|.+|++..-.-...... ....+.++..+..+-. |.+.+++.+..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLADEAFRLL 106 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHHhC
Confidence 3566666554444445566667888887765433322222 2233556666665432 45555554431
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 107 g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 107 GGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp SSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 3444443333322232 346666666554
No 304
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=40.38 E-value=1.2e+02 Score=25.43 Aligned_cols=93 Identities=13% Similarity=0.035 Sum_probs=43.6
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------C
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------N 182 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~ 182 (421)
+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+.. +
T Consensus 5 vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS-----DRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHTTC
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHHhCC
Confidence 55555544433444556667787777654322111111 1223555556655432 45556554431 3
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
..+++.+....+.+. .++.+++++..+
T Consensus 80 id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 80 FDVIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 444443333233232 245566655544
No 305
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=39.91 E-value=77 Score=26.16 Aligned_cols=103 Identities=14% Similarity=0.142 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
+|+++..+.+.. ..|.+|++..|.-.. -..++...|.....+++. +.+++.+.+..+..+|++-..+.
T Consensus 42 TT~lL~~a~r~~-~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~-------~~~~~~~~~~~~~dvViIDEaQF- 112 (214)
T 2j9r_A 42 SEELIRRVRRTQ-FAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVS-------ASKDIFKHITEEMDVIAIDEVQF- 112 (214)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEECC-----------------CCEEECS-------SGGGGGGGCCSSCCEEEECCGGG-
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecC-------CHHHHHHHHhcCCCEEEEECccc-
Confidence 466666666554 467777777655332 223444556555544442 12344444433456777777776
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccccccCCCCccc
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLTFGSTPYVR 236 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 236 (421)
++.+.++.+.+++.+ |+.+|+=.--.+| .+..+..
T Consensus 113 ----~~~~~V~~l~~l~~~-~~~Vi~~Gl~~DF--~~~~F~~ 147 (214)
T 2j9r_A 113 ----FDGDIVEVVQVLANR-GYRVIVAGLDQDF--RGLPFGQ 147 (214)
T ss_dssp ----SCTTHHHHHHHHHHT-TCEEEEEECSBCT--TSCBCTT
T ss_pred ----CCHHHHHHHHHHhhC-CCEEEEEeccccc--ccCcccc
Confidence 556677666666654 8888876555553 3554444
No 306
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=39.76 E-value=1.6e+02 Score=25.35 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=47.5
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC-------C-----cc---hHHHHhhcCceeEeeeccCCCCccCCHH
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPG-------F-----PL---YEANARHTRLEIRHFDLLPEKGWEVDLD 173 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~-------y-----~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e 173 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-. . .. ........|.++..+..+-. |.+
T Consensus 28 gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~ 102 (299)
T 3t7c_A 28 GKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-----DFD 102 (299)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC-----CHH
Confidence 3446666555444444556677788887765322 0 00 11122344666666665532 555
Q ss_pred HHHhhhcc------CceEEEEeCCCCCccc---ccCHHHHHHHHH
Q 014631 174 GLEALADE------NTVAMVIVNPGNPCGN---VFTYQQLQKIAE 209 (421)
Q Consensus 174 ~l~~~~~~------~~~~i~~~~p~nptG~---~~~~~~l~~i~~ 209 (421)
++++.++. +..+++.+......+. .++.+++++..+
T Consensus 103 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 103 AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 55554431 3444433333222222 246677776655
No 307
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=39.49 E-value=1.4e+02 Score=25.09 Aligned_cols=91 Identities=15% Similarity=0.115 Sum_probs=48.6
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--CceEEEE
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--NTVAMVI 188 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--~~~~i~~ 188 (421)
.+++|.++..-=..+.+.|.+.|-+|++.+-.-.. .....+.++..+..+-. |.+++++.++. +.. +++
T Consensus 13 ~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~---~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~g~iD-iLV 83 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADG---VHAPRHPRIRREELDIT-----DSQRLQRLFEALPRLD-VLV 83 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTS---TTSCCCTTEEEEECCTT-----CHHHHHHHHHHCSCCS-EEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHH---HhhhhcCCeEEEEecCC-----CHHHHHHHHHhcCCCC-EEE
Confidence 45555555544445556677889888776532221 11223444555554432 55666666543 233 445
Q ss_pred eCC-CCCcccccCHHHHHHHHHH
Q 014631 189 VNP-GNPCGNVFTYQQLQKIAEK 210 (421)
Q Consensus 189 ~~p-~nptG~~~~~~~l~~i~~~ 210 (421)
.|. -+.....++.++++++.++
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHHH
Confidence 544 2333345677888877764
No 308
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=39.30 E-value=1e+02 Score=25.46 Aligned_cols=64 Identities=14% Similarity=0.010 Sum_probs=30.8
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
.+++|.++...=..+.+.|.+.|.+|++..-.-........ ..+.++..+..+-. |.+.+++.+
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 71 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVA-----DEGDVNAAI 71 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTT-----CHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHH
Confidence 35566554433344455566678777765433222222221 12445555554432 556665544
No 309
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=38.97 E-value=1.5e+02 Score=23.82 Aligned_cols=93 Identities=9% Similarity=0.028 Sum_probs=45.2
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCC-HHHHHhhhccCceEEEEeC
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVD-LDGLEALADENTVAMVIVN 190 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~e~l~~~~~~~~~~i~~~~ 190 (421)
|++|.++...=..+++.|.+.|.+|.+..-.-.... ...+ +..+..+. -| .+.+.+++. +..+++.+.
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~---~~~~--~~~~~~D~-----~d~~~~~~~~~~-~~d~vi~~a 71 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVP---QYNN--VKAVHFDV-----DWTPEEMAKQLH-GMDAIINVS 71 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSC---CCTT--EEEEECCT-----TSCHHHHHTTTT-TCSEEEECC
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchh---hcCC--ceEEEecc-----cCCHHHHHHHHc-CCCEEEECC
Confidence 566654433334445566677877766542221111 1123 33343332 25 778888776 456665544
Q ss_pred CCC-CcccccCHHHHHHHHHHHHhcC
Q 014631 191 PGN-PCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 191 p~n-ptG~~~~~~~l~~i~~~~~~~~ 215 (421)
... +.-......-...+.+.|++.+
T Consensus 72 g~~~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 72 GSGGKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp CCTTSSCCCCCCHHHHHHHHHHHHTT
T ss_pred cCCCCCcEeEeHHHHHHHHHHHHHhC
Confidence 422 2111122234556667676544
No 310
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=38.85 E-value=96 Score=26.32 Aligned_cols=97 Identities=13% Similarity=-0.038 Sum_probs=48.0
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCC-cch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
...+++|.++...=..+.+.|.+.|.+|++..-.- ... .......+.++..+..|-. |.+.+++.+..
T Consensus 28 ~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~~~~~~~ 102 (269)
T 4dmm_A 28 DRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS-----QESEVEALFAAVIE 102 (269)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHH
Confidence 34566666554444445566777888877643211 111 2222334666666665432 45555554431
Q ss_pred ---CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
+..+++.+....+.+ ...+.+++++..++
T Consensus 103 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 103 RWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 344444333332222 23466777766553
No 311
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=38.72 E-value=1.5e+02 Score=24.63 Aligned_cols=95 Identities=13% Similarity=0.077 Sum_probs=45.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-....... ...|.++..+..+-. |.+++++.+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~~ 82 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVASTVEAL 82 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 34666655544444455666677877776543222111111 223555666655432 45555554431
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 83 GGLDILVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp SCCSEEEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3444443333222232 245566665544
No 312
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=38.60 E-value=1.8e+02 Score=24.71 Aligned_cols=97 Identities=12% Similarity=0.047 Sum_probs=49.9
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc----------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL----------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
...+++|.++...=..+.+.|.+.|.+|++..-.-.. ........+.++..+..+-. |.+++++.
T Consensus 9 ~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~ 83 (285)
T 3sc4_A 9 GKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVAAA 83 (285)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHH
Confidence 3456666655544445556677788887765432221 12223344667777765533 45555544
Q ss_pred hcc------CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 179 ADE------NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 179 ~~~------~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+.. +..+++.+......+. ..+.+++++..++
T Consensus 84 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 84 VAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 431 3444444333333332 3566777766553
No 313
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=38.51 E-value=1.4e+02 Score=24.68 Aligned_cols=95 Identities=12% Similarity=0.014 Sum_probs=44.2
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCcee-EeeeccCCCCccCCHHHHHhhhc-----cC
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEI-RHFDLLPEKGWEVDLDGLEALAD-----EN 182 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~-~~~~~~~~~~~~~d~e~l~~~~~-----~~ 182 (421)
...+++|.++..-=..+++.|.+.|.+|++..-.-..........+.++ ..+..+-. |.+.+++.+. .+
T Consensus 11 ~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~~ 85 (254)
T 2wsb_A 11 GACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVT-----DAEAMTAAAAEAEAVAP 85 (254)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTT-----CHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecC-----CHHHHHHHHHHHHhhCC
Confidence 3456666554443345556666778777775433222222222234344 44444322 5566655543 23
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIA 208 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~ 208 (421)
...++.+......+. ..+.+++++..
T Consensus 86 id~li~~Ag~~~~~~~~~~~~~~~~~~~ 113 (254)
T 2wsb_A 86 VSILVNSAGIARLHDALETDDATWRQVM 113 (254)
T ss_dssp CCEEEECCCCCCCBCSTTCCHHHHHHHH
T ss_pred CcEEEECCccCCCCCcccCCHHHHHHHH
Confidence 444544433222221 23455555443
No 314
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=38.20 E-value=1.6e+02 Score=24.60 Aligned_cols=96 Identities=13% Similarity=0.134 Sum_probs=47.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-....... ...+.++..+..+-. |.+++++.++.
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 81 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVR-----NTDDIQKMIEQIDEKF 81 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 34556655544444455667778888877543332222222 223455666655432 45555554431
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 182 -~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
+..+++.+......+ ..++.+++++..++
T Consensus 82 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 113 (257)
T 3imf_A 82 GRIDILINNAAGNFICPAEDLSVNGWNSVINI 113 (257)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 344444333222222 23566777766654
No 315
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=38.15 E-value=1.2e+02 Score=26.52 Aligned_cols=54 Identities=15% Similarity=0.142 Sum_probs=38.1
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
++..+|.+.+++.++ .+...++ ...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 25 ~dg~iD~~~l~~lv~~li~~Gv~Gl~-v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVia 85 (303)
T 2wkj_A 25 QQQALDKASLRRLVQFNIQQGIDGLY-VGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIA 85 (303)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCSEEE-ESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEE-ECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345799999987653 4566664 45555567789999999999988753 466664
No 316
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=37.80 E-value=1.5e+02 Score=25.17 Aligned_cols=95 Identities=14% Similarity=0.069 Sum_probs=44.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVR-----SVPEIEALVAAVVERY 97 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHHh
Confidence 3466665544433445556667787777654322211111 1223555655655432 45555554431
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 98 g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 128 (277)
T 2rhc_B 98 GPVDVLVNNAGRPGGGATAELADELWLDVVE 128 (277)
T ss_dssp CSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443333222222 245566665544
No 317
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.18 E-value=22 Score=33.44 Aligned_cols=31 Identities=19% Similarity=0.549 Sum_probs=26.5
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
-.|+. ++++++++.|+++|+.||.|-++-..
T Consensus 72 ~~Gt~---~df~~lv~~aH~~Gi~VilD~V~NH~ 102 (496)
T 4gqr_A 72 RSGNE---DEFRNMVTRCNNVGVRIYVDAVINHM 102 (496)
T ss_dssp TTBCH---HHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CCCCH---HHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 35555 99999999999999999999887654
No 318
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=36.93 E-value=1.2e+02 Score=26.93 Aligned_cols=103 Identities=17% Similarity=0.214 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHhcC-CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHH-H----hh--hcc-CceEEEE
Q 014631 118 CKQAIQVILTVLAR-PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGL-E----AL--ADE-NTVAMVI 188 (421)
Q Consensus 118 ~~~al~~~~~~l~~-~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l-~----~~--~~~-~~~~i~~ 188 (421)
++-++..+.....+ +|..++..+..+......++..|.....+-+.... +.|++ . .+ +.. .++++++
T Consensus 42 TtL~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~d~llv~~~~----~~E~~~l~i~~~l~~i~~~~~~lvVI 117 (333)
T 3io5_A 42 SNFGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDPERVIHTPVQ----SLEQLRIDMVNQLDAIERGEKVVVFI 117 (333)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCGGGEEEEECS----BHHHHHHHHHHHHHTCCTTCCEEEEE
T ss_pred HHHHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCHHHeEEEcCC----CHHHHHHHHHHHHHHhhccCceEEEE
Confidence 45556655555432 46778777766655455677778654322221111 33433 2 22 333 4667777
Q ss_pred eCCCCCc------cc--------cc----CHHHHHHHHHHHHhcCcEEE-Ecccc
Q 014631 189 VNPGNPC------GN--------VF----TYQQLQKIAEKARKLGIMVI-SDEVY 224 (421)
Q Consensus 189 ~~p~npt------G~--------~~----~~~~l~~i~~~~~~~~~~li-~De~~ 224 (421)
-+.+... |. .. -...+.+|..+++++|+.+| +..++
T Consensus 118 DSI~aL~~~~eieg~~gd~~~gsv~qaR~~s~~LrkL~~~ak~~~i~vi~tNQV~ 172 (333)
T 3io5_A 118 DSLGNLASKKETEDALNEKVVSDMTRAKTMKSLFRIVTPYFSTKNIPCIAINHTY 172 (333)
T ss_dssp ECSTTCBCC--------------CTHHHHHHHHHHHHHHHHHHTTCEEEEEEEC-
T ss_pred ecccccccchhccCccccccccHHHHHHHHHHHHHHHHHHHHHhCCEEEEECCee
Confidence 6665432 11 00 11336667778999998655 44443
No 319
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=36.89 E-value=1.3e+02 Score=25.19 Aligned_cols=94 Identities=16% Similarity=0.050 Sum_probs=43.4
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL--YEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
.+++|.++..-=..+.+.|.+.|.+|++..-.-.. .... ....+.++..+..+-. |.+.+++.+..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 78 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVT-----DKANFDSAIDEAAEK 78 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHH
Confidence 35555554443344455666678777765432221 1111 1223555666655432 45555554431
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 79 ~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 110 (258)
T 3a28_C 79 LGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYS 110 (258)
T ss_dssp HTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443333222222 245566665444
No 320
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=36.75 E-value=43 Score=32.41 Aligned_cols=24 Identities=17% Similarity=0.357 Sum_probs=22.2
Q ss_pred ccccCHHHHHHHHHHHHhcCcEEE
Q 014631 196 GNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 196 G~~~~~~~l~~i~~~~~~~~~~li 219 (421)
|-.++.+++++|++.|+++|+-||
T Consensus 250 ~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 250 QKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp SSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred CCCcCHHHHHHHHHHHHHhCCcee
Confidence 567999999999999999999888
No 321
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=36.65 E-value=1.3e+02 Score=25.46 Aligned_cols=65 Identities=17% Similarity=0.130 Sum_probs=32.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-..........+.++..+..|-. |.+++++.+
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 71 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVS-----DPKAVEAVF 71 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-----CHHHHHHHH
Confidence 34666655544444455566677888777543322223333333334555554432 455555544
No 322
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=36.43 E-value=1.1e+02 Score=25.94 Aligned_cols=95 Identities=13% Similarity=0.104 Sum_probs=46.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC--------Cc-----ch---HHHHhhcCceeEeeeccCCCCccCCHH
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPG--------FP-----LY---EANARHTRLEIRHFDLLPEKGWEVDLD 173 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~--------y~-----~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e 173 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-. +. .. .......+.++..+..+-. |.+
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~ 86 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTR-----DFD 86 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHH
Confidence 345666555444445556677788887775321 10 11 1112334556666655432 556
Q ss_pred HHHhhhcc------CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 174 GLEALADE------NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 174 ~l~~~~~~------~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.++. +..+++.+......+. ..+.+++++..+
T Consensus 87 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 3tsc_A 87 RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMD 130 (277)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 66554432 3444443333322222 346677766655
No 323
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=36.34 E-value=1.7e+02 Score=24.13 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=18.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3466665544433445556667787777654
No 324
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=36.30 E-value=66 Score=24.36 Aligned_cols=22 Identities=18% Similarity=0.308 Sum_probs=17.6
Q ss_pred HHHHHHHHhcCcEEEEcccccc
Q 014631 205 QKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 205 ~~i~~~~~~~~~~li~De~~~~ 226 (421)
+++.++|+++|+.++-+.+.+.
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g~ 128 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLMV 128 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHHH
T ss_pred HHHHHHHHHcCCEEEcCCccce
Confidence 6788888999999998776543
No 325
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=36.24 E-value=1.8e+02 Score=24.10 Aligned_cols=65 Identities=12% Similarity=0.176 Sum_probs=33.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-.-..... .....+.++..+..+-. |.+++++.+
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~ 81 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVT-----NTESVQNAV 81 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHH
Confidence 456666555444444555666778787775433221111 12223555666655432 556665544
No 326
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=36.02 E-value=1.1e+02 Score=26.08 Aligned_cols=32 Identities=19% Similarity=0.231 Sum_probs=19.7
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
...+++|.++..-=..+.+.|.+.|.+|++.+
T Consensus 11 ~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 11 GKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 34466666555444455666777888877653
No 327
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=35.95 E-value=1.4e+02 Score=26.00 Aligned_cols=96 Identities=11% Similarity=-0.055 Sum_probs=47.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC----------Ccch---HHHHhhcCceeEeeeccCCCCccCCHHHHH
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPG----------FPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLE 176 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~----------y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~ 176 (421)
..+++|.|+...=..+.+.|.+.|.+|++.+-. -... .......|.++..+..+-. |.++++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~ 102 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA-----DWDQAA 102 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT-----SHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 345666555444444556677788888776432 1111 2222334666666655432 555555
Q ss_pred hhhcc------CceEEEEeCCCCCcc--cccCHHHHHHHHHH
Q 014631 177 ALADE------NTVAMVIVNPGNPCG--NVFTYQQLQKIAEK 210 (421)
Q Consensus 177 ~~~~~------~~~~i~~~~p~nptG--~~~~~~~l~~i~~~ 210 (421)
+.+.. +..+++.+......+ ...+.+++++..++
T Consensus 103 ~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 103 GLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 54431 334443332222222 23466777666553
No 328
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=35.92 E-value=1.9e+02 Score=24.10 Aligned_cols=95 Identities=13% Similarity=-0.009 Sum_probs=45.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhc------
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ 180 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------ 180 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLS-----SRSERQELMNTVANHF 84 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 4566666554444445556667888877654322111111 1223556666655432 5555555442
Q ss_pred -cCceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 181 -ENTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 181 -~~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+..+++.+....+.+ ..++.+++++..+
T Consensus 85 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 116 (260)
T 2ae2_A 85 HGKLNILVNNAGIVIYKEAKDYTVEDYSLIMS 116 (260)
T ss_dssp TTCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2344444333222222 2345566665544
No 329
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=35.92 E-value=1.7e+02 Score=24.69 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=19.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++...=..+.+.|.+.|.+|++.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 3466665554444455566777888877654
No 330
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=35.82 E-value=2e+02 Score=24.34 Aligned_cols=100 Identities=14% Similarity=-0.015 Sum_probs=47.1
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhc--cC
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALAD--EN 182 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~--~~ 182 (421)
+...+++|.|+...=..+.+.|.+.|.+|++.+-.-...... ....+.++..+..+-.+. -+.+.+.+.+. .+
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~--~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEA--GAGTDLIERAEAIAP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTST--THHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCH--HHHHHHHHHHHHhCC
Confidence 344566666655444555666777888877754333222222 233466666666543321 12222322221 13
Q ss_pred ceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 183 TVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 183 ~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
..+++.+......+. ..+.+++++..+
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (275)
T 4imr_A 110 VDILVINASAQINATLSALTPNDLAFQLA 138 (275)
T ss_dssp CCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344443333222222 346677766554
No 331
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=35.67 E-value=1.9e+02 Score=23.88 Aligned_cols=95 Identities=13% Similarity=0.004 Sum_probs=44.4
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-.-..... .....+.++..+..+-. |.+.+++.+..
T Consensus 11 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 85 (255)
T 1fmc_A 11 GKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDIT-----SEQELSALADFAISK 85 (255)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHh
Confidence 3456666554443344556677788777765432221111 11223445555554332 55666555431
Q ss_pred --CceEEEEeCCCCCcc-cccCHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCG-NVFTYQQLQKIA 208 (421)
Q Consensus 182 --~~~~i~~~~p~nptG-~~~~~~~l~~i~ 208 (421)
+..+++.+......+ ...+.+++++..
T Consensus 86 ~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~ 115 (255)
T 1fmc_A 86 LGKVDILVNNAGGGGPKPFDMPMADFRRAY 115 (255)
T ss_dssp HSSCCEEEECCCCCCCCCTTCCHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCCCCCHHHHHHHH
Confidence 445555443322211 124455554433
No 332
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=35.61 E-value=2e+02 Score=24.51 Aligned_cols=95 Identities=17% Similarity=0.111 Sum_probs=46.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc-chHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP-LYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-. ....... ..+.++..+..+-. |.+++++.+..
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMT-----KPSEIADMMAMVAD 100 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTT-----CHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCC-----CHHHHHHHHHHHHH
Confidence 45666666554444555667778888877654221 1111111 12455666654432 55555554431
Q ss_pred ---CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. .++.+++++..+
T Consensus 101 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~ 133 (281)
T 3v2h_A 101 RFGGADILVNNAGVQFVEKIEDFPVEQWDRIIA 133 (281)
T ss_dssp HTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HCCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 3444443333333332 246677766554
No 333
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=35.60 E-value=1.9e+02 Score=23.91 Aligned_cols=94 Identities=9% Similarity=0.028 Sum_probs=44.4
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC-CCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
.+++|.++..-=..+.+.|.+.|.+|++..- .-...... ....+.++..+..+-. |.+++++.++.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 6 VALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVA-----NAEDVTNMVKQTVDVF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 4566655444334445566677877776532 21111111 1223555666655432 55566554432
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 2uvd_A 81 GQVDILVNNAGVTKDNLLMRMKEEEWDTVIN 111 (246)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 3444443333222232 245566665544
No 334
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=35.56 E-value=55 Score=29.63 Aligned_cols=70 Identities=19% Similarity=0.301 Sum_probs=41.9
Q ss_pred HHHhhcCceeEeeeccCCCCccCCHHHHHhhhccC---ceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 148 ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADEN---TVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 148 ~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~---~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
......+.+.....+.++.+|.+..+.+-+..... .... ..++ .+.+-.++.+++++|++.|+++|+-||
T Consensus 40 d~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~~~~~~~~g~-~~~~-~~~~g~YT~~di~eiv~YA~~rgI~VI 112 (367)
T 1yht_A 40 DTISLSGGNFLHLHFSDHENYAIESHLLNQRAENAVQGKDGI-YINP-YTGKPFLSYRQLDDIKAYAKAKGIELI 112 (367)
T ss_dssp HHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGGGSEECTTSC-EECT-TTCCEEBCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHcCCcEEEEEEEcCCCceeeecchhhhhhhhccccCCC-cCCC-CCCCCCcCHHHHHHHHHHHHHcCCEEE
Confidence 33445677777777766667776544322111100 0000 0111 123457999999999999999999888
No 335
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=35.39 E-value=17 Score=36.56 Aligned_cols=28 Identities=25% Similarity=0.485 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~NHt~ 342 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFNHVY 342 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 3899999999999999999999886543
No 336
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=35.21 E-value=1.1e+02 Score=25.54 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=19.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPG 142 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~ 142 (421)
..+++|.|+..-=..+.+.|.+.|.+|++..-.
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~ 40 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARS 40 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECC
Confidence 345666555444344556666778888776543
No 337
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=35.10 E-value=1.9e+02 Score=24.28 Aligned_cols=65 Identities=23% Similarity=0.095 Sum_probs=32.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh---c--CceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH---T--RLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~---~--g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-......... . +.++..+..|-. |.+.+++.+
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 83 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVS-----DEAQVEAYV 83 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCC-----CHHHHHHHH
Confidence 3466665554444455566667787877654322222211111 1 555666655432 455555544
No 338
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=35.03 E-value=2.1e+02 Score=24.23 Aligned_cols=95 Identities=15% Similarity=0.045 Sum_probs=46.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc------------c---hHHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFP------------L---YEANARHTRLEIRHFDLLPEKGWEVDLDG 174 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~------------~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~ 174 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-. . ........|.++..+..+-. |.++
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~ 85 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVK-----DRAA 85 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHH
Confidence 34566655544444556667778888777543210 0 11122344666666665432 4555
Q ss_pred HHhhhcc------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 175 LEALADE------NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 175 l~~~~~~------~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+++.++. +..+++.+....+.+ ..++.+++++..+
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIG 128 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554431 344444333322222 2356677765544
No 339
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=34.92 E-value=2.2e+02 Score=25.12 Aligned_cols=37 Identities=24% Similarity=0.269 Sum_probs=30.4
Q ss_pred CCCcccccCHHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 192 GNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.+|.|-....+++.++++.|+++|+.+++|--|++..
T Consensus 50 ~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~W 86 (332)
T 1hjs_A 50 VNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTW 86 (332)
T ss_dssp SSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSC
T ss_pred eCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCc
Confidence 5677777777999999999999999999997665543
No 340
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=34.76 E-value=1.8e+02 Score=24.50 Aligned_cols=95 Identities=15% Similarity=0.058 Sum_probs=46.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALAD----- 180 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~----- 180 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-........ ..+.++..+..|-. |.+++++.++
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 95 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLA-----EPDAPAELARRAAEA 95 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----STTHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 345666555444444556677788887776543322222221 14556666665543 3333333222
Q ss_pred -cCceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 181 -ENTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 181 -~~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+..+++.+......+ ...+.+++++..+
T Consensus 96 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 127 (266)
T 4egf_A 96 FGGLDVLVNNAGISHPQPVVDTDPQLFDATIA 127 (266)
T ss_dssp HTSCSEEEEECCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 1345554443332222 2346666766554
No 341
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=34.75 E-value=39 Score=29.75 Aligned_cols=52 Identities=10% Similarity=0.160 Sum_probs=37.0
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc-CcEEEEcccccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL-GIMVISDEVYDHLT 228 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~~~ 228 (421)
-.+.+++++..+.+.+++.++ |. +.++.+++.+.|+++ |+.+|-+.+.+...
T Consensus 84 ~~~~~~e~i~~Gi~~iv~~t~----G~--~~~~~~~l~~~a~~~~gi~liGPnc~Gii~ 136 (305)
T 2fp4_A 84 AAAAINEAIDAEVPLVVCITE----GI--PQQDMVRVKHRLLRQGKTRLIGPNCPGVIN 136 (305)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----CC--CHHHHHHHHHHHTTCSSCEEECSSSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEEECC----CC--ChHHHHHHHHHHHhcCCcEEEeCCCCeEec
Confidence 355667777777887666555 33 336677899999999 99998787765543
No 342
>3pff_A ATP-citrate synthase; phosphohistidine, organic acid, ATP-grAsp, lyase, transferas; HET: TLA ADP; 2.30A {Homo sapiens}
Probab=33.89 E-value=71 Score=32.46 Aligned_cols=77 Identities=16% Similarity=0.195 Sum_probs=49.3
Q ss_pred CCCcchHHHHhhc-CceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631 141 PGFPLYEANARHT-RLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 141 p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 218 (421)
|+|.+...+.... +..+..+-+++. .-++.++++++ .+.+.+++..-..|. .+-+++.++|+++|+.|
T Consensus 551 p~y~sv~ea~~~~p~~DlaVI~vP~~----~v~~av~ea~~~~Gvk~~Viis~Gf~e------~~~~~l~~~A~~~g~rl 620 (829)
T 3pff_A 551 PVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEGIPE------ALTRKLIKKADQKGVTI 620 (829)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSCCCH------HHHHHHHHHHHHHTCEE
T ss_pred ccCCcHHHHhhccCCCcEEEEeCCHH----HHHHHHHHHHhhCCCCEEEEeCCCCCH------HHHHHHHHHHHHcCCEE
Confidence 6666666655543 344444333222 35678888888 788877665544332 45688999999999999
Q ss_pred EEccccccc
Q 014631 219 ISDEVYDHL 227 (421)
Q Consensus 219 i~De~~~~~ 227 (421)
|==.+.+.+
T Consensus 621 iGPNc~Gii 629 (829)
T 3pff_A 621 IGPATVGGI 629 (829)
T ss_dssp ECSSCCCEE
T ss_pred EcCCCcccC
Confidence 865555443
No 343
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=33.78 E-value=1.1e+02 Score=25.80 Aligned_cols=96 Identities=10% Similarity=0.036 Sum_probs=47.6
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC-CCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++..- .-... .......|.++..+..+-. |.+++++.++.
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 93 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLFDQAVAH 93 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 34566655544444555667778888776422 11111 2223345666766665432 55555554432
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+....+.+. .++.+++++..++
T Consensus 94 ~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 94 FGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344433222233332 2466777766553
No 344
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=33.73 E-value=24 Score=24.21 Aligned_cols=23 Identities=26% Similarity=0.183 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhcCcEEEEcccc
Q 014631 202 QQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~ 224 (421)
.--.+|.++|+++|+.++.|..-
T Consensus 27 ~~A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 27 AKALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCCEEeCHHH
Confidence 45788999999999999999654
No 345
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=33.69 E-value=98 Score=27.44 Aligned_cols=78 Identities=13% Similarity=0.193 Sum_probs=46.3
Q ss_pred cCCCCeEEEcCCCCcc-------h---HHHHhhcCceeEeeeccCCCC-c-----cCCHHHHHhhh-ccCceEEEEeCCC
Q 014631 130 ARPGANILLPKPGFPL-------Y---EANARHTRLEIRHFDLLPEKG-W-----EVDLDGLEALA-DENTVAMVIVNPG 192 (421)
Q Consensus 130 ~~~gd~Vl~~~p~y~~-------~---~~~~~~~g~~~~~~~~~~~~~-~-----~~d~e~l~~~~-~~~~~~i~~~~p~ 192 (421)
+++||+|-+..|+... + ....+..|.+++.-+...... + ....++|.+++ ++..++|+.+-..
T Consensus 9 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (327)
T 4h1h_A 9 LKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGG 88 (327)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCCc
Confidence 5799999999888542 1 233456788887655432211 1 11345555554 4567777766666
Q ss_pred CCcccccCHHHHHHH
Q 014631 193 NPCGNVFTYQQLQKI 207 (421)
Q Consensus 193 nptG~~~~~~~l~~i 207 (421)
.-+-.+++.=+.+.|
T Consensus 89 ~g~~rlL~~LD~~~i 103 (327)
T 4h1h_A 89 FNSNQLLPYLDYDLI 103 (327)
T ss_dssp SCGGGGGGGCCHHHH
T ss_pred hhHHHHhhhcchhhh
Confidence 666667665455444
No 346
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=33.55 E-value=51 Score=28.69 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=35.5
Q ss_pred CHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 171 DLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 171 d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
-.+.++++++.+.+.+++.. +|. +.++.+++.+.|+++++.++-..+.+.+
T Consensus 77 ~~~~~~ea~~~Gi~~vVi~t----~G~--~~~~~~~l~~~a~~~gi~vigPNc~Gii 127 (288)
T 1oi7_A 77 AADAALEAAHAGIPLIVLIT----EGI--PTLDMVRAVEEIKALGSRLIGGNCPGII 127 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECC----SCC--CHHHHHHHHHHHHHHTCEEEESSSCEEE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CCC--CHHHHHHHHHHHHHcCCEEEeCCCCeEE
Confidence 35566677777777655433 232 4467889999999999998878765543
No 347
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=33.39 E-value=60 Score=30.21 Aligned_cols=96 Identities=9% Similarity=0.111 Sum_probs=56.5
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcc-hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcc
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPL-YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCG 196 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~-~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG 196 (421)
..+++..+.+.+ ++-+-+++++|.... +....+.... ..+|+--++.+--+++.+.+.+..+..-++..-++. .|
T Consensus 275 ~~eai~~~~~~l-~~y~i~~iEdPl~~dD~~g~~~l~~~--~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ikv~q-iG 350 (436)
T 2al1_A 275 GPQLADLYHSLM-KRYPIVSIEDPFAEDDWEAWSHFFKT--AGIQIVADDLTVTNPKRIATAIEKKAADALLLKVNQ-IG 350 (436)
T ss_dssp HHHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHTT--CCSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHH-HC
T ss_pred HHHHHHHHHHHH-HhCCcEEEECCCCCcCHHHHHHHHhc--CCCeEEECCcccCCHHHHHHHHHhCCCCEEEechhh-cC
Confidence 355555544444 344688999987653 2222222221 123332222222368889888876654455655654 45
Q ss_pred cccCHHHHHHHHHHHHhcCcEEEE
Q 014631 197 NVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 197 ~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
.+ .+..+++++|+++|+.+++
T Consensus 351 Gi---tea~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 351 TL---SESIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp CH---HHHHHHHHHHHHTTCEEEE
T ss_pred CH---HHHHHHHHHHHHcCCeEEE
Confidence 55 5788999999999997654
No 348
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=33.27 E-value=1.1e+02 Score=26.43 Aligned_cols=28 Identities=14% Similarity=0.021 Sum_probs=22.5
Q ss_pred cCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 199 FTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 199 ~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
.+.++.+++.+.|+++|+.+.+...+..
T Consensus 101 ~~~~~~~~l~~~a~~~g~~~~v~~~~r~ 128 (308)
T 3uuw_A 101 STVSQGEELIELSTKKNLNLMVGFNRRF 128 (308)
T ss_dssp SSHHHHHHHHHHHHHHTCCEEECCGGGG
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeecccc
Confidence 4568999999999999998887766544
No 349
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=33.20 E-value=2.1e+02 Score=23.67 Aligned_cols=66 Identities=18% Similarity=0.044 Sum_probs=34.9
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
...+++|.++...=..+.+.|.+.|.+|++.+..-...... ....+.++..+..+-. |.+.+++.+
T Consensus 9 ~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 77 (253)
T 3qiv_A 9 NKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVS-----DPESAKAMA 77 (253)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHH
Confidence 34566666554444445566667887877765433222222 2233556666665432 455555544
No 350
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=33.08 E-value=42 Score=31.66 Aligned_cols=73 Identities=10% Similarity=0.186 Sum_probs=45.9
Q ss_pred CCCCcchHHHHhhc-CceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEE
Q 014631 140 KPGFPLYEANARHT-RLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 140 ~p~y~~~~~~~~~~-g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 218 (421)
-|.|..|..+.... ..+...+-++.. .-++.++++.+.+.+ +++.+-..+ .+.-+++.++|+++|+.+
T Consensus 21 ~Pv~~~~~~~~~~p~~~DlavI~vPa~----~v~~~v~e~~~~Gv~-~viis~Gf~------~~~~~~l~~~A~~~g~rl 89 (480)
T 3dmy_A 21 LTQVRRWDSACQKLPDANLALISVAGE----YAAELANQALDRNLN-VMMFSDNVT------LEDEIQLKTRAREKGLLV 89 (480)
T ss_dssp CEEESSHHHHHHHSTTCCEEEECSCHH----HHHHHHHHHHHTTCE-EEECCCCCC------HHHHHHHHHHHHHTTCCE
T ss_pred CcccchHHHHHhcCCCCCEEEEecCHH----HHHHHHHHHHhcCCC-EEEECCCCC------HHHHHHHHHHHHHcCCEE
Confidence 45566776666654 344433333221 346777888877888 444433333 467789999999999988
Q ss_pred EEccc
Q 014631 219 ISDEV 223 (421)
Q Consensus 219 i~De~ 223 (421)
+==.+
T Consensus 90 iGPNc 94 (480)
T 3dmy_A 90 MGPDC 94 (480)
T ss_dssp ECSSC
T ss_pred EecCc
Confidence 85544
No 351
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=32.95 E-value=27 Score=35.05 Aligned_cols=27 Identities=26% Similarity=0.476 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-++-..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~ 280 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHT 280 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcc
Confidence 499999999999999999999988654
No 352
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=32.94 E-value=1.8e+02 Score=24.45 Aligned_cols=66 Identities=11% Similarity=0.033 Sum_probs=33.0
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-.-...... ....|.++..+..+-. |.+.+++.+
T Consensus 31 ~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----~~~~v~~~~ 99 (272)
T 1yb1_A 31 GEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCS-----NREDIYSSA 99 (272)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCC-----CHHHHHHHH
Confidence 34566665554443445556667787777654322222211 2223555666655432 455555444
No 353
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=32.93 E-value=1.7e+02 Score=25.55 Aligned_cols=54 Identities=13% Similarity=0.051 Sum_probs=37.6
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
.+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 29 ~dg~iD~~~l~~lv~~li~~Gv~gi-~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpvia 89 (304)
T 3l21_A 29 GDGSLDTATAARLANHLVDQGCDGL-VVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIA 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEE-EESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEE-EeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345689998887653 455555 445555667788999999999888764 456664
No 354
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=32.71 E-value=1.7e+02 Score=24.47 Aligned_cols=96 Identities=14% Similarity=0.040 Sum_probs=47.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.++.
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 86 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMKAY 86 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred cEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 3466666554444445566777888887765433222222 2234556666665432 45555554431
Q ss_pred -CceEEEEeCCC-CCccc--ccCHHHHHHHHHH
Q 014631 182 -NTVAMVIVNPG-NPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 -~~~~i~~~~p~-nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+... .+.+. ..+.+++++..++
T Consensus 87 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 87 GRVDVVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp SCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 33444433322 12222 3466777665543
No 355
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=32.70 E-value=1.4e+02 Score=25.36 Aligned_cols=31 Identities=19% Similarity=0.221 Sum_probs=19.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++..-=..+.+.|.+.|-+|++.+
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 3456665554444455566777888877753
No 356
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=32.65 E-value=35 Score=31.89 Aligned_cols=27 Identities=26% Similarity=0.439 Sum_probs=24.4
Q ss_pred CCcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 193 NPCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 193 nptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
++.|-.++.+++++|++.|+++|+-||
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VI 112 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLI 112 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeee
Confidence 456778999999999999999999888
No 357
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=32.61 E-value=2.3e+02 Score=24.02 Aligned_cols=94 Identities=7% Similarity=0.002 Sum_probs=44.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhc------c
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------E 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------~ 181 (421)
.+++|.++...=..+++.|.+.|.+|++..-.-...... ....+.++..+..+-. |.+.+++.+. .
T Consensus 46 ~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~~~~ 120 (285)
T 2c07_A 46 VALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVS-----KKEEISEVINKILTEHK 120 (285)
T ss_dssp EEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHCS
T ss_pred EEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCC-----CHHHHHHHHHHHHHhcC
Confidence 466665554444445566778888877743221111111 2223556666655432 5566655442 1
Q ss_pred CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 121 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 150 (285)
T 2c07_A 121 NVDILVNNAGITRDNLFLRMKNDEWEDVLR 150 (285)
T ss_dssp CCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 3444444333222221 245556655443
No 358
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=32.58 E-value=2.2e+02 Score=23.91 Aligned_cols=95 Identities=16% Similarity=0.005 Sum_probs=45.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhc------
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ 180 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------ 180 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+.
T Consensus 22 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 96 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLL-----SRTERDKLMQTVAHVF 96 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 3466665554444455566667787877654322212211 1223555655655432 4555555442
Q ss_pred -cCceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 181 -ENTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 181 -~~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+..+++.+......+ ...+.+++++..+
T Consensus 97 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 128 (273)
T 1ae1_A 97 DGKLNILVNNAGVVIHKEAKDFTEKDYNIIMG 128 (273)
T ss_dssp TSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 2344444333222222 2245666665544
No 359
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=32.55 E-value=83 Score=27.32 Aligned_cols=72 Identities=19% Similarity=0.195 Sum_probs=39.5
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh---cc-CceEEEEeCCCCCcccccCHHHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA---DE-NTVAMVIVNPGNPCGNVFTYQQLQKI 207 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~---~~-~~~~i~~~~p~nptG~~~~~~~l~~i 207 (421)
++..+++..+.| ..+++.+|++...+... +-.+.+..|.+++ ++ +.++| +.+++.+.-. .+.
T Consensus 189 ~~~~~v~~H~af---~Yf~~~yGl~~~~~~~~---~~eps~~~l~~l~~~ik~~~v~~I-f~e~~~~~~~------~~~- 254 (291)
T 1pq4_A 189 PQRKFIVFHPSW---AYFARDYNLVQIPIEVE---GQEPSAQELKQLIDTAKENNLTMV-FGETQFSTKS------SEA- 254 (291)
T ss_dssp SCCEEEESSCCC---HHHHHHTTCEEEESCBT---TBCCCHHHHHHHHHHHHTTTCCEE-EEETTSCCHH------HHH-
T ss_pred CCCEEEEECCch---HHHHHHCCCEEeecccC---CCCCCHHHHHHHHHHHHHcCCCEE-EEeCCCChHH------HHH-
Confidence 567888877654 46678899887655321 2345656555543 33 34444 5555433322 233
Q ss_pred HHHHHhcCcEEE
Q 014631 208 AEKARKLGIMVI 219 (421)
Q Consensus 208 ~~~~~~~~~~li 219 (421)
++++.|+.++
T Consensus 255 --ia~~~g~~v~ 264 (291)
T 1pq4_A 255 --IAAEIGAGVE 264 (291)
T ss_dssp --HHHHHTCEEE
T ss_pred --HHHHcCCeEE
Confidence 3556676554
No 360
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=32.45 E-value=1.9e+02 Score=24.85 Aligned_cols=95 Identities=15% Similarity=0.103 Sum_probs=44.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+..
T Consensus 35 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVT-----DEDGIQAMVAQIESEV 109 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHHHT
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCC-----CHHHHHHHHHHHHHHc
Confidence 3466665554444455566667788877754322111111 1223545555554432 45555554432
Q ss_pred -CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 110 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 140 (291)
T 3cxt_A 110 GIIDILVNNAGIIRRVPMIEMTAAQFRQVID 140 (291)
T ss_dssp CCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCcEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2444443332222221 245566665543
No 361
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=32.39 E-value=2.7e+02 Score=24.70 Aligned_cols=95 Identities=13% Similarity=0.038 Sum_probs=46.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc----------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL----------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++...=..+.+.|.+.|-+|++..-.-.. ........|.++..+..|-. |.+.+++.+
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~ 120 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISAAV 120 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHHHH
Confidence 345566555443344556677788777765322221 12233445667777765432 555555544
Q ss_pred cc------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 180 DE------NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 180 ~~------~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+. +..+++.+......+ ...+.++++++.+
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 31 344444333322222 2345566655443
No 362
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=32.32 E-value=1.6e+02 Score=22.24 Aligned_cols=44 Identities=9% Similarity=0.200 Sum_probs=27.2
Q ss_pred HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631 172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
.+.+++++..+.+.+++. + |.. -+++.+.|+++|+.++-+.+.+
T Consensus 91 ~~vv~~~~~~gi~~i~~~-~----g~~-----~~~l~~~a~~~Gi~vvGpnc~g 134 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWFQ-Y----NTY-----NREASKKADEAGLIIVANRCMM 134 (144)
T ss_dssp HHHHHHHHHHTCSEEEEC-T----TCC-----CHHHHHHHHHTTCEEEESCCHH
T ss_pred HHHHHHHHHcCCCEEEEC-C----Cch-----HHHHHHHHHHcCCEEEcCCchh
Confidence 344445555566666543 2 222 3677788889999988776643
No 363
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.72 E-value=1.8e+02 Score=24.42 Aligned_cols=96 Identities=23% Similarity=0.141 Sum_probs=46.6
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcC-ceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTR-LEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g-~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++..-.-....... ...+ .++..+..+-. |.+.+++.+..
T Consensus 10 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (262)
T 3pk0_A 10 GRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVS-----DRAQCDALAGRAVE 84 (262)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345666665544444555667778888877654332222222 2223 45555555432 45555544421
Q ss_pred ---CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 ---NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 ---~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+ ...+.+++++..+
T Consensus 85 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 117 (262)
T 3pk0_A 85 EFGGIDVVCANAGVFPDAPLATMTPEQLNGIFA 117 (262)
T ss_dssp HHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 344444333332222 2346677666554
No 364
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=31.49 E-value=2.2e+02 Score=24.32 Aligned_cols=95 Identities=16% Similarity=0.187 Sum_probs=44.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-......... .+.++..+..+-. |.+.+++.+..
T Consensus 27 k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~~~~~~~~~~~~ 101 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVR-----DPDMVQNTVSELIKV 101 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCC-----CHHHHHHHHHHHHHH
Confidence 3466665554444445556667787777754332222221111 1555666655432 45555554432
Q ss_pred --CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 102 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 133 (302)
T 1w6u_A 102 AGHPNIVINNAAGNFISPTERLSPNAWKTITD 133 (302)
T ss_dssp TCSCSEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 3345544433222221 245555555443
No 365
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=31.42 E-value=1.4e+02 Score=27.04 Aligned_cols=78 Identities=9% Similarity=0.101 Sum_probs=44.7
Q ss_pred cCCCCeEEEcCCCCcch----------HHHHhhcCceeEeeeccCCC-Cc-----cCCHHHHHhhhc-cCceEEEEeCCC
Q 014631 130 ARPGANILLPKPGFPLY----------EANARHTRLEIRHFDLLPEK-GW-----EVDLDGLEALAD-ENTVAMVIVNPG 192 (421)
Q Consensus 130 ~~~gd~Vl~~~p~y~~~----------~~~~~~~g~~~~~~~~~~~~-~~-----~~d~e~l~~~~~-~~~~~i~~~~p~ 192 (421)
+++||+|-+..|+.... ...++..|.+++.-+..... ++ .-..++|.+++. +..++|+.+-..
T Consensus 40 Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rGG 119 (371)
T 3tla_A 40 LAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIGG 119 (371)
T ss_dssp CCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 46888888888876431 22345678887765543221 11 113555555554 566777666666
Q ss_pred CCcccccCHHHHHHH
Q 014631 193 NPCGNVFTYQQLQKI 207 (421)
Q Consensus 193 nptG~~~~~~~l~~i 207 (421)
+-+-.+++.=+...|
T Consensus 120 yga~rlLp~LD~~~i 134 (371)
T 3tla_A 120 DNSNSLLPFLDYDAI 134 (371)
T ss_dssp SCGGGGGGGSCHHHH
T ss_pred ccHHHHHhhcChhhH
Confidence 666666665445444
No 366
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=31.24 E-value=98 Score=25.92 Aligned_cols=61 Identities=13% Similarity=-0.016 Sum_probs=33.3
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
.+++|.++...=..+.+.|.+.|.+|++..- .........+.++..+..+-. |.+++++.+
T Consensus 11 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 71 (257)
T 3tl3_A 11 VAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASAL 71 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHH
Confidence 4556655444334455566677877776543 223444445666666665432 455555443
No 367
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=30.99 E-value=1.6e+02 Score=25.08 Aligned_cols=65 Identities=9% Similarity=-0.017 Sum_probs=36.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-.-..........+.++..+..+-. |.+++++.+
T Consensus 6 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~ 70 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVR-----SLQDQKRAA 70 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTT-----CHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCC-----CHHHHHHHH
Confidence 35666666554444555667778888887654433344444455656666665432 455554443
No 368
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=30.73 E-value=1.9e+02 Score=23.86 Aligned_cols=94 Identities=14% Similarity=0.048 Sum_probs=44.4
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cce
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NTV 184 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~~ 184 (421)
.+++|.++..-=..+.+.|.+.|.+|++.+-.-........... +...+..+-. |.+++++.++. +..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~-~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~id 77 (247)
T 3dii_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERP-NLFYFHGDVA-----DPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCT-TEEEEECCTT-----SHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcc-cCCeEEeeCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 35666555444445556677788888776533222222222222 2334443322 55555554432 344
Q ss_pred EEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 185 AMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 185 ~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+++.+....+.+. ..+.+++++..++
T Consensus 78 ~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 105 (247)
T 3dii_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCC-CCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 4444333322222 3456667665543
No 369
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=30.60 E-value=1.6e+02 Score=24.47 Aligned_cols=64 Identities=9% Similarity=0.027 Sum_probs=31.0
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
+++|.++..-=..+.+.|.+.|.+|++..-.-..........+.++..+..+-. |.+++++.+.
T Consensus 3 vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~ 66 (248)
T 3asu_A 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVR-----NRAAIEEMLA 66 (248)
T ss_dssp EEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCC-----CHHHHHHHHH
Confidence 455544433333445556677877776543222222233333334555554432 5566665543
No 370
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=30.60 E-value=35 Score=31.79 Aligned_cols=26 Identities=35% Similarity=0.506 Sum_probs=23.9
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEE
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li 219 (421)
|.|-.++.+++++|++.|+++|+-||
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VI 109 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLI 109 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 55778999999999999999999888
No 371
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=30.60 E-value=2.3e+02 Score=23.51 Aligned_cols=31 Identities=32% Similarity=0.219 Sum_probs=18.6
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEe
Confidence 3466665554444445556667788877654
No 372
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=30.54 E-value=2.6e+02 Score=24.24 Aligned_cols=95 Identities=20% Similarity=0.147 Sum_probs=46.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC-------Ccc-----h---HHHHhhcCceeEeeeccCCCCccCCHHH
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPG-------FPL-----Y---EANARHTRLEIRHFDLLPEKGWEVDLDG 174 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~-------y~~-----~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~ 174 (421)
..+++|.++...=..+.+.|.+.|.+|++.+-. +.. . .......|.++..+..+-. |.++
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~ 121 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR-----DLAS 121 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CHHH
Confidence 345666555444445556677788887765322 110 1 1122334666666665432 4555
Q ss_pred HHhhhcc------CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 175 LEALADE------NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 175 l~~~~~~------~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+++.+.. +..+++.+......+. .++.+++++..+
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 5554431 3444443333322232 346677766654
No 373
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=30.46 E-value=1.1e+02 Score=26.42 Aligned_cols=49 Identities=10% Similarity=0.102 Sum_probs=36.7
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEcc
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 222 (421)
|-+|..++.++..-+..+|++... .++.++++++.+.|++.|+-++++-
T Consensus 128 fi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 128 FLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 456777887776666667665443 3567899999999999999888763
No 374
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=30.45 E-value=2.2e+02 Score=24.07 Aligned_cols=95 Identities=17% Similarity=0.076 Sum_probs=46.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|-+|++..-.-..... .....|.++..+..+-. |.+++++.+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 103 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVN-----DATAVDALVESTLKEF 103 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCC-----CHHHHHHHHHHHHHHc
Confidence 345666555444444556677788888776543322222 22233555555554432 45555554431
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 104 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~ 134 (270)
T 3ftp_A 104 GALNVLVNNAGITQDQLAMRMKDDEWDAVID 134 (270)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444333322223 2346677766554
No 375
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=30.44 E-value=32 Score=32.10 Aligned_cols=28 Identities=14% Similarity=0.377 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 91 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLINHMA 91 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECSEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecccc
Confidence 4999999999999999999998876543
No 376
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=30.36 E-value=1.9e+02 Score=24.22 Aligned_cols=97 Identities=9% Similarity=-0.039 Sum_probs=46.0
Q ss_pred CCcEEEcCCH-HHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh----hcCceeEeeeccCCCCccCCHHHHHhhhcc--
Q 014631 109 PDDVYLTAGC-KQAIQVILTVLARPGANILLPKPGFPLYEANAR----HTRLEIRHFDLLPEKGWEVDLDGLEALADE-- 181 (421)
Q Consensus 109 ~~~i~~~~g~-~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~----~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-- 181 (421)
...+++|.++ ...=..+.+.|.+.|.+|++.+-.-........ ..+.++..+..|-. |.+.+++.+..
T Consensus 22 ~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 96 (266)
T 3o38_A 22 GKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVT-----STEAVDALITQTV 96 (266)
T ss_dssp TCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCC-----CHHHHHHHHHHHH
Confidence 3456677663 322233445566778787776433322222221 12345666665432 45555544421
Q ss_pred ----CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 ----NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 ----~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+....+.+. ..+.+++++..++
T Consensus 97 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 131 (266)
T 3o38_A 97 EKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNV 131 (266)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHH
Confidence 3344444333322222 3466777666553
No 377
>2ki0_A DS119; beta-alpha-beta, de novo protein; NMR {Synthetic}
Probab=30.35 E-value=29 Score=18.28 Aligned_cols=19 Identities=42% Similarity=0.560 Sum_probs=15.3
Q ss_pred CHHHHHHHHHHHHhcCcEE
Q 014631 200 TYQQLQKIAEKARKLGIMV 218 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~l 218 (421)
++++++++.+-+++.|+.+
T Consensus 13 tpeelkklkeeakkanirv 31 (36)
T 2ki0_A 13 TPEELKKLKEEAKKANIRV 31 (36)
T ss_dssp CHHHHHHHHHHHHHHCCCC
T ss_pred CHHHHHHHHHHHHhccEEE
Confidence 3499999999999888643
No 378
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=30.23 E-value=2.6e+02 Score=23.86 Aligned_cols=95 Identities=12% Similarity=0.134 Sum_probs=44.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh---h-----cCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---H-----TRLEIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~-----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-........ . .+.++..+..+-. |.+.+++.+..
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 93 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIR-----NEEEVNNLVKS 93 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCC-----CHHHHHHHHHH
Confidence 346666554443344555666778777775432222111111 1 3445566655432 55566554432
Q ss_pred ------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 ------NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 ------~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 94 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 129 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLE 129 (303)
T ss_dssp HHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 345554433322222 1245566655444
No 379
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=30.23 E-value=1.5e+02 Score=24.95 Aligned_cols=30 Identities=17% Similarity=0.234 Sum_probs=17.9
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 8 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (278)
T 1spx_A 8 VAIITGSSNGIGRATAVLFAREGAKVTITG 37 (278)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 456665544433445556667888877654
No 380
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.20 E-value=98 Score=27.04 Aligned_cols=47 Identities=15% Similarity=0.161 Sum_probs=34.0
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...++ ...++.-+..++.++.+++.+.+.+.
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~-v~GtTGE~~~Ls~eEr~~v~~~~~~~ 77 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIV-VGGTTGESPTLTSEEKVALYRHVVSV 77 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEE-ESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEE-ECccccChhhCCHHHHHHHHHHHHHH
Confidence 45799999887653 4556654 45555566788999999999988753
No 381
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=30.19 E-value=1.6e+02 Score=26.12 Aligned_cols=78 Identities=15% Similarity=0.203 Sum_probs=46.0
Q ss_pred cCCCCeEEEcCCCCcch----------HHHHhhcCceeEeeeccCCCC-c-----cCCHHHHHhhh-ccCceEEEEeCCC
Q 014631 130 ARPGANILLPKPGFPLY----------EANARHTRLEIRHFDLLPEKG-W-----EVDLDGLEALA-DENTVAMVIVNPG 192 (421)
Q Consensus 130 ~~~gd~Vl~~~p~y~~~----------~~~~~~~g~~~~~~~~~~~~~-~-----~~d~e~l~~~~-~~~~~~i~~~~p~ 192 (421)
+++||+|-+..|+.... ...++..|.+++.-+...... + .-..++|.+++ ++..++|+.+-..
T Consensus 9 L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 88 (331)
T 4e5s_A 9 LKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLGG 88 (331)
T ss_dssp CCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 57899999988887532 223456788887665432211 1 11345555555 4567777766666
Q ss_pred CCcccccCHHHHHHH
Q 014631 193 NPCGNVFTYQQLQKI 207 (421)
Q Consensus 193 nptG~~~~~~~l~~i 207 (421)
.-+-.+++.=+.+.|
T Consensus 89 ~g~~rlL~~lD~~~i 103 (331)
T 4e5s_A 89 YNSNGLLKYLDYDLI 103 (331)
T ss_dssp SCGGGGGGGCCHHHH
T ss_pred ccHHHHHhhcChhHH
Confidence 666666665444444
No 382
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=30.09 E-value=1.3e+02 Score=26.49 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=38.1
Q ss_pred CCccCCHHHHHhhh----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc--CcEEEE
Q 014631 166 KGWEVDLDGLEALA----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL--GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~ 220 (421)
.+..+|.+.+++.+ +.+...+ +...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 22 ~dg~iD~~~l~~lv~~li~~Gv~Gl-~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpVia 81 (313)
T 3dz1_A 22 DDGKIDDVSIDRLTDFYAEVGCEGV-TVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIV 81 (313)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEE-EESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHCCCCEE-EeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEE
Confidence 34569999998765 3456666 444555566789999999999988765 456654
No 383
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=30.01 E-value=1.7e+02 Score=25.54 Aligned_cols=53 Identities=9% Similarity=0.096 Sum_probs=36.8
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVI 219 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li 219 (421)
++..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+. .+.+|
T Consensus 30 ~dg~iD~~~l~~lv~~li~~Gv~gl-~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 89 (304)
T 3cpr_A 30 ESGDIDIAAGREVAAYLVDKGLDSL-VLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI 89 (304)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCCEE-EESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEE-EECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE
Confidence 345799998887654 455665 445555566778999999999888753 35555
No 384
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=29.88 E-value=1e+02 Score=20.38 Aligned_cols=28 Identities=11% Similarity=0.038 Sum_probs=23.2
Q ss_pred CeEEEEec-CCHHHHHHHHHHHHHHHHHh
Q 014631 390 NWLRITFA-IEPSALEEGLGRIKAFCQRH 417 (421)
Q Consensus 390 ~~iRi~~~-~~~e~l~~~~~~l~~~~~~~ 417 (421)
..+|||+. .+..+-+++.+.|.+++.++
T Consensus 46 krvrisitartkkeaekfaailikvfael 74 (106)
T 1qys_A 46 KRVRISITARTKKEAEKFAAILIKVFAEL 74 (106)
T ss_dssp SEEEEEEECSSHHHHHHHHHHHHHHHHHT
T ss_pred cEEEEEEEecchhHHHHHHHHHHHHHHHh
Confidence 56799997 78888899998888887765
No 385
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=29.87 E-value=2.6e+02 Score=23.83 Aligned_cols=96 Identities=17% Similarity=0.089 Sum_probs=48.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.|+...=..+.+.|.+.|.+|++..-.-.. ........|.++..+..+-. |.+++++.+..
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIVQETVRQ 122 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 456666665544445566677788887765433221 12223345666766665432 45555544431
Q ss_pred --CceEEEEeCCC-CCccc--ccCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNPG-NPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p~-nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+... .+.+. .++.+++++..++
T Consensus 123 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 123 LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 34444333222 22221 2466777776654
No 386
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=29.68 E-value=2.5e+02 Score=23.45 Aligned_cols=94 Identities=7% Similarity=-0.029 Sum_probs=46.3
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEc-CCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLP-KPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
.+++|.++..-=..+.+.|.+.|-+|++. ...-...... ....|.++..+..+-. |.+++++.+..
T Consensus 6 ~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~ 80 (258)
T 3oid_A 6 CALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVG-----QPAKIKEMFQQIDETF 80 (258)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 45566554444444556677788887764 4332222222 2334556666665432 55555554432
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (258)
T 3oid_A 81 GRLDVFVNNAASGVLRPVMELEETHWDWTMN 111 (258)
T ss_dssp SCCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 334444333322222 2356677666554
No 387
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=29.66 E-value=2.4e+02 Score=23.35 Aligned_cols=94 Identities=24% Similarity=0.169 Sum_probs=44.8
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCc-chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFP-LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~-~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
.+++|.++..-=..+.+.|.+.|.+|++..-.-. .........|.++..+..+-. |.+++++.+.. +.
T Consensus 6 ~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~i 80 (255)
T 2q2v_A 6 TALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEIARHGVKAVHHPADLS-----DVAQIEALFALAEREFGGV 80 (255)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTSCCEEEECCCTT-----SHHHHHHHHHHHHHHHSSC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHhcCCceEEEeCCCC-----CHHHHHHHHHHHHHHcCCC
Confidence 4666655444444455566678888777543221 111222223555555554332 55666555431 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+....+.+. ..+.+++++..+
T Consensus 81 d~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (255)
T 2q2v_A 81 DILVNNAGIQHVAPVEQFPLESWDKIIA 108 (255)
T ss_dssp SEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 54544333222221 245566655443
No 388
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=29.25 E-value=2.3e+02 Score=23.87 Aligned_cols=31 Identities=19% Similarity=0.289 Sum_probs=18.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++..-=..+.+.|.+.|.+|++..
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 37 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITG 37 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEe
Confidence 3466665554444445556667788877754
No 389
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=29.21 E-value=2.4e+02 Score=23.21 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=46.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCC-cch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
.+++|.++..-=..+.+.|.+.|.+|++....- ... .......|.++..+..+-. |.+++++.++.
T Consensus 6 ~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 6 SALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVA-----DADEVKAMIKEVVSQF 80 (246)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHc
Confidence 456666554444445566777888876643221 111 1222334666666665432 55555554431
Q ss_pred -CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+ ...+.+++++..+
T Consensus 81 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (246)
T 3osu_A 81 GSLDVLVNNAGITRDNLLMRMKEQEWDDVID 111 (246)
T ss_dssp SCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 344444333332222 2346676666554
No 390
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=29.20 E-value=2.5e+02 Score=23.39 Aligned_cols=96 Identities=9% Similarity=0.041 Sum_probs=47.2
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc-CCCCcchH---HHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc---
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLP-KPGFPLYE---ANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE--- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~---~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~--- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++. ...-.... ......|.++..+..+-. |.+++++.+..
T Consensus 8 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 8 NRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT-----NAAEVEAAISAAAD 82 (259)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 3456666555444445556677788887765 33322222 222334556666655432 45555554431
Q ss_pred ---CceEEEEeCC-CC-Cccc--ccCHHHHHHHHHH
Q 014631 182 ---NTVAMVIVNP-GN-PCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 ---~~~~i~~~~p-~n-ptG~--~~~~~~l~~i~~~ 210 (421)
+..++ +.+. .. +.+. .++.+++++..++
T Consensus 83 ~~g~id~l-v~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 83 KFGEIHGL-VHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHCSEEEE-EECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HhCCCCEE-EECCCccCCCCChhhCCHHHHHHHHHH
Confidence 33334 3333 22 2222 3566777666553
No 391
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=29.14 E-value=2.3e+02 Score=23.05 Aligned_cols=93 Identities=13% Similarity=0.024 Sum_probs=42.7
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCCeEEE-cCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631 112 VYLTAGCKQAIQVILTVLARPGANILL-PKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------ 181 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd~Vl~-~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------ 181 (421)
+++|.++..-=..+.+.|.+.|.+|++ ....-...... ....+.++..+..+-. |.+++++.+..
T Consensus 4 vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g 78 (244)
T 1edo_A 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVS-----KEADVEAMMKTAIDAWG 78 (244)
T ss_dssp EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTT-----SHHHHHHHHHHHHHHSS
T ss_pred EEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCC-----CHHHHHHHHHHHHHHcC
Confidence 556655443334445566677877766 33322111111 1223555666654432 55666555432
Q ss_pred CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......+. ..+.+++++..+
T Consensus 79 ~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 108 (244)
T 1edo_A 79 TIDVVVNNAGITRDTLLIRMKKSQWDEVID 108 (244)
T ss_dssp CCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCcCcccCCHHHHHHHHH
Confidence 3455544333222221 245555555443
No 392
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=29.06 E-value=2.8e+02 Score=23.97 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=49.8
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH----hhcCceeEeeeccCCCCccCCHHHHHhhhcc-CceE
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA----RHTRLEIRHFDLLPEKGWEVDLDGLEALADE-NTVA 185 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~----~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-~~~~ 185 (421)
.|++|.++...=..+++.|.+.|.+|++..-.-....... ...+.++..+..+- -|.+.+++++.. +...
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~~~~~~~~~~d~ 81 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDV-----SDERALARIFDAHPITA 81 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCT-----TCHHHHHHHHHHSCCCE
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeec-----CCHHHHHHHHhccCCcE
Confidence 5666655433334445566677888877643322221111 11233444444332 267788877753 4555
Q ss_pred EEEeCCCCCccccc---------CHHHHHHHHHHHHhcCc
Q 014631 186 MVIVNPGNPCGNVF---------TYQQLQKIAEKARKLGI 216 (421)
Q Consensus 186 i~~~~p~nptG~~~---------~~~~l~~i~~~~~~~~~ 216 (421)
++.+......+... ...-...+.+.|++.+.
T Consensus 82 vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 82 AIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp EEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 55544433222111 11123467778887764
No 393
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=28.85 E-value=2.6e+02 Score=24.45 Aligned_cols=94 Identities=14% Similarity=0.147 Sum_probs=45.1
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC--Ccc------hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPG--FPL------YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~--y~~------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
.+++|.++..-=..+.+.|.+.|.+|++..-. -.. ........+.++..+..|-. |.+.+++.++.
T Consensus 7 ~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvt-----d~~~v~~~~~~~ 81 (324)
T 3u9l_A 7 IILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQ-----SQVSVDRAIDQI 81 (324)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHH
Confidence 45666555444445556677889888764211 111 11222334556666665433 45555554431
Q ss_pred -----CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 -----NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -----~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+......|. .++.++++++.+
T Consensus 82 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~ 116 (324)
T 3u9l_A 82 IGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYD 116 (324)
T ss_dssp HHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHH
Confidence 3444433333333332 245566655443
No 394
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=28.62 E-value=2.3e+02 Score=22.92 Aligned_cols=30 Identities=17% Similarity=0.159 Sum_probs=17.9
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+++|.++...=..+.+.|.+.|.+|++..
T Consensus 7 ~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 36 (234)
T 2ehd_A 7 AVLITGASRGIGEATARLLHAKGYRVGLMA 36 (234)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEE
Confidence 466665544433445556667787777654
No 395
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=28.56 E-value=2.4e+02 Score=23.98 Aligned_cols=95 Identities=9% Similarity=-0.101 Sum_probs=46.8
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|-+|++.+-.-....... ...|.++..+..+-. |.+++++.+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 103 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVS-----DELQMRNAVRDLVLKF 103 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHHHh
Confidence 34566655544444455667778888877654332222222 223556666665432 55555554432
Q ss_pred -CceEEEEeCCCC-Cccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGN-PCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+.... +.+. .++.+++++..+
T Consensus 104 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~ 135 (283)
T 3v8b_A 104 GHLDIVVANAGINGVWAPIDDLKPFEWDETIA 135 (283)
T ss_dssp SCCCEEEECCCCCCCBCCTTTSCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 344444333322 2122 345666666554
No 396
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=28.53 E-value=52 Score=27.99 Aligned_cols=81 Identities=14% Similarity=0.152 Sum_probs=48.8
Q ss_pred eEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 135 NILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 135 ~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
.|+++...|.+......... +.+.+|+.. .+|-+|+-++.++..-+..+|++. -.+++.++++++.+.|++.
T Consensus 81 SVLTd~~~F~Gs~~~L~~vr-~~v~lPvLr-KDFiid~yQI~eAr~~GADaILLI------~a~L~~~~l~~l~~~A~~l 152 (258)
T 4a29_A 81 SITTEEKYFNGSYETLRKIA-SSVSIPILM-SDFIVKESQIDDAYNLGADTVLLI------VKILTERELESLLEYARSY 152 (258)
T ss_dssp EEECCSTTTCCCHHHHHHHH-TTCSSCEEE-ESCCCSHHHHHHHHHHTCSEEEEE------GGGSCHHHHHHHHHHHHHT
T ss_pred EEeCCCCCCCCCHHHHHHHH-HhcCCCEee-ccccccHHHHHHHHHcCCCeeehH------HhhcCHHHHHHHHHHHHHH
Confidence 45555665655443333221 112334322 356789888877554455555442 2457778999999999999
Q ss_pred CcEEEEcccc
Q 014631 215 GIMVISDEVY 224 (421)
Q Consensus 215 ~~~li~De~~ 224 (421)
|+-+++. +|
T Consensus 153 Gl~~LvE-Vh 161 (258)
T 4a29_A 153 GMEPLIL-IN 161 (258)
T ss_dssp TCCCEEE-ES
T ss_pred hHHHHHh-cc
Confidence 9877663 44
No 397
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=28.45 E-value=2.6e+02 Score=23.26 Aligned_cols=95 Identities=13% Similarity=-0.045 Sum_probs=43.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhc------
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALAD------ 180 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~------ 180 (421)
..+++|.++...=..+.+.|.+.|..|++..-.-...... ....+.++..+..+-. |.+.+++.+.
T Consensus 15 k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 89 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDAS-----LRPEREKLMQTVSSMF 89 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCC-----CHHHHHHHHHHHHHHh
Confidence 3466665544443455566667787777654322211111 1223445555554322 4555555442
Q ss_pred -cCceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 181 -ENTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 181 -~~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+..+++.+....+.+. ..+.+++++..+
T Consensus 90 ~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 121 (266)
T 1xq1_A 90 GGKLDILINNLGAIRSKPTLDYTAEDFSFHIS 121 (266)
T ss_dssp TTCCSEEEEECCC------CCCCHHHHHHHHH
T ss_pred CCCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 34455554443222221 235566554443
No 398
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=28.45 E-value=3.1e+02 Score=24.19 Aligned_cols=76 Identities=13% Similarity=0.051 Sum_probs=46.0
Q ss_pred hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccccc
Q 014631 146 YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 146 ~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
+....+..|.+. + + +++..-+.-++.+.+.-+..-+-+ -.||.+-..+.+...++++.|+++|+.+++|--|+
T Consensus 11 ~~~~~e~~g~~~--~--~-~~G~~~~~~~ilk~~G~n~vRlri--~v~P~~g~~d~~~~~~~~~~ak~~Gl~v~ld~hys 83 (334)
T 1fob_A 11 SLLLLEDEGYSY--K--N-LNGQTQALETILADAGINSIRQRV--WVNPSDGSYDLDYNLELAKRVKAAGMSLYLDLHLS 83 (334)
T ss_dssp THHHHHHTTCCC--B--C-TTSCBCCHHHHHHHHTCCEEEEEE--CSCCTTCTTCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHcCCEE--E--C-CCCCCchHHHHHHHcCCCEEEEEE--EECCCCCccCHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 344456667654 2 1 223223444444434333322311 25577767778999999999999999999997776
Q ss_pred ccc
Q 014631 226 HLT 228 (421)
Q Consensus 226 ~~~ 228 (421)
+..
T Consensus 84 d~w 86 (334)
T 1fob_A 84 DTW 86 (334)
T ss_dssp SSC
T ss_pred CCC
Confidence 543
No 399
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=28.32 E-value=2.7e+02 Score=23.47 Aligned_cols=98 Identities=13% Similarity=0.051 Sum_probs=48.9
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEc-CCCCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc--
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLARPGANILLP-KPGFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-- 181 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-- 181 (421)
....+++|.++..-=..+.+.|.+.|.+|++. ...-... .......|.++..+..+-. |.+++++.+..
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 104 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNR-----DAEAIEQAIRETV 104 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 33456666665544445556677788887765 2221111 1222334666666665432 55555554431
Q ss_pred ----CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 ----NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 ----~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+......+. ..+.+++++..++
T Consensus 105 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 139 (271)
T 3v2g_A 105 EALGGLDILVNSAGIWHSAPLEETTVADFDEVMAV 139 (271)
T ss_dssp HHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 3444443332222222 3466777776653
No 400
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=28.26 E-value=2.7e+02 Score=23.57 Aligned_cols=94 Identities=12% Similarity=-0.007 Sum_probs=46.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh---hcCceeEeeeccCCCCccCCHHHHHhhhcc------
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---HTRLEIRHFDLLPEKGWEVDLDGLEALADE------ 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------ 181 (421)
.+++|.++...=..+.+.|.+.|-+|++..-.-........ ..+.++..+..+-. |.+.+++.+..
T Consensus 10 ~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 10 IAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVG-----DEALHEALVELAVRRFG 84 (280)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTT-----CHHHHHHHHHHHHHHHS
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHcC
Confidence 45566554443344556677788888876543322222222 23555666554432 45555554431
Q ss_pred CceEEEEeCCCC-Cccc--ccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGN-PCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+.... +.+. ..+.+++++..+
T Consensus 85 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 115 (280)
T 3tox_A 85 GLDTAFNNAGALGAMGEISSLSVEGWRETLD 115 (280)
T ss_dssp CCCEEEECCCCCCSCSCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCChhhCCHHHHHHHHH
Confidence 344443333222 2222 356677766554
No 401
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.11 E-value=2.4e+02 Score=24.18 Aligned_cols=32 Identities=16% Similarity=0.263 Sum_probs=19.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKP 141 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p 141 (421)
..+++|.++...=..+.+.|.+.|.+|++..-
T Consensus 27 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 58 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFAKEGAQVTITGR 58 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeC
Confidence 34666655544444555666677888777543
No 402
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=28.01 E-value=2.5e+02 Score=23.55 Aligned_cols=87 Identities=14% Similarity=0.124 Sum_probs=42.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-.. +.++..+..+-. |.+.+++.+.. +.
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~--------~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~~g~i 75 (264)
T 2dtx_A 9 KVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG--------EAKYDHIECDVT-----NPDQVKASIDHIFKEYGSI 75 (264)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC--------SCSSEEEECCTT-----CHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc--------CCceEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 346666655444445556666778777664321111 333444444322 45555554432 34
Q ss_pred eEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
.+++.+......+. ..+.+++++..+
T Consensus 76 D~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 103 (264)
T 2dtx_A 76 SVLVNNAGIESYGKIESMSMGEWRRIID 103 (264)
T ss_dssp CEEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 44543333322232 245566666554
No 403
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=27.90 E-value=1.3e+02 Score=26.37 Aligned_cols=53 Identities=6% Similarity=0.093 Sum_probs=34.4
Q ss_pred CccCCHHHHHhhh----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 167 GWEVDLDGLEALA----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 167 ~~~~d~e~l~~~~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
+..+|.+.+++.+ +.+...+ +...++.-+..++.++.+++++.+.+. ++.+|.
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl-~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia 86 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVI-VPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA 86 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEE-CTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEE-EeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 4568888887755 3355555 344444455678888888888887754 455553
No 404
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=27.90 E-value=2.6e+02 Score=23.56 Aligned_cols=32 Identities=22% Similarity=0.252 Sum_probs=19.2
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKP 141 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p 141 (421)
..+++|.++..-=..+.+.|.+.|.+|++.+-
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r 61 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICAR 61 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECS
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeC
Confidence 34666655444444455566678888877653
No 405
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=27.84 E-value=41 Score=30.87 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 68 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 68 AAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 4999999999999999999998876543
No 406
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=27.82 E-value=1.3e+02 Score=26.14 Aligned_cols=53 Identities=15% Similarity=0.095 Sum_probs=37.5
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc----CcEEEE
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL----GIMVIS 220 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~ 220 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl-~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia 82 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAV-VPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLA 82 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEE-ECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEE-EECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE
Confidence 45689998887653 455665 445555666788999999999988764 466664
No 407
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=27.79 E-value=2.2e+02 Score=24.06 Aligned_cols=155 Identities=12% Similarity=0.120 Sum_probs=84.4
Q ss_pred CCCCeeeccCCCCCCCCCCCCcHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCH---
Q 014631 42 DPRPIIPLGHGDPSAFPCFRTTPVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGC--- 118 (421)
Q Consensus 42 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~--- 118 (421)
.|.++|-+++--.+... ==|.++++..+++.++.. +..+-+.+.+. +. . -.+++-+=.
T Consensus 40 ~GaD~iElGiPfSDP~a---DGpvIq~a~~rAL~~g~~--------~~~~~~~~~~~----r~---~-~Pivlm~Y~N~i 100 (252)
T 3tha_A 40 SPIDILELGVAYSDPIA---DGEIIADAAKIALDQGVD--------IHSVFELLARI----KT---K-KALVFMVYYNLI 100 (252)
T ss_dssp SSCSEEEEECCCSCCCS---CCCHHHHHHHHHHHTTCC--------HHHHHHHHHHC----CC---S-SEEEEECCHHHH
T ss_pred cCCCEEEECCCCCCCCC---CcHHHHHHHHHHHHCCCC--------HHHHHHHHHHH----hc---C-CCEEEEeccCHH
Confidence 38899888776433111 125677888888876421 23333333332 11 1 124332221
Q ss_pred -HHHHHHHHHHhcCCC-CeEEEcCCCC---cchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 119 -KQAIQVILTVLARPG-ANILLPKPGF---PLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 119 -~~al~~~~~~l~~~g-d~Vl~~~p~y---~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
.-++..+++.+.+.| |.+++++--+ ..+...++..|...+.+-. ++ -+.+.+++........+++.+-..
T Consensus 101 ~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P~----t~~eRi~~ia~~a~gFiY~Vs~~G 175 (252)
T 3tha_A 101 FSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-VT----TPKERVKKLVKHAKGFIYLLASIG 175 (252)
T ss_dssp HHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-TT----SCHHHHHHHHTTCCSCEEEECCSC
T ss_pred HHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CcHHHHHHHHHhCCCeEEEEecCC
Confidence 234555666666667 8899887543 2356677888988766432 22 135666665554445565555445
Q ss_pred CcccccC-HHHHHHHHHHHHhc-CcEEEE
Q 014631 194 PCGNVFT-YQQLQKIAEKARKL-GIMVIS 220 (421)
Q Consensus 194 ptG~~~~-~~~l~~i~~~~~~~-~~~li~ 220 (421)
.||..-. .+++.++++..+++ +..+++
T Consensus 176 vTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 176 ITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 6886522 24566777766665 445544
No 408
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=27.71 E-value=34 Score=24.00 Aligned_cols=24 Identities=21% Similarity=0.228 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHhcCcEEEEccccc
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
.--.+|.++|+++|+.++.|..-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 27 QCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHTTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCEEECHHHH
Confidence 447889999999999999996543
No 409
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=27.55 E-value=2.2e+02 Score=23.60 Aligned_cols=95 Identities=15% Similarity=0.082 Sum_probs=44.5
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC-CCCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK-PGFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~-p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++.. ..-... .......+.++..+..+-. |.+.+++.+..
T Consensus 14 k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~ 88 (256)
T 3ezl_A 14 RIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVG-----DWDSTKQAFDKVKAE 88 (256)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCC-----CHHHHHHHHHHHHHh
Confidence 3455555544433445566777887776633 222222 2223344556666654432 45555544431
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 89 ~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 120 (256)
T 3ezl_A 89 VGEIDVLVNNAGITRDVVFRKMTREDWQAVID 120 (256)
T ss_dssp TCCEEEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCchhhCCHHHHHHHHH
Confidence 334443332222222 2245566665544
No 410
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=27.54 E-value=1.9e+02 Score=24.11 Aligned_cols=97 Identities=9% Similarity=0.038 Sum_probs=45.8
Q ss_pred CCCcEEEcCCH--HHHHHHHHHHhcCCCCeEEEcCCCCcch-----HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 108 SPDDVYLTAGC--KQAIQVILTVLARPGANILLPKPGFPLY-----EANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 108 ~~~~i~~~~g~--~~al~~~~~~l~~~gd~Vl~~~p~y~~~-----~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
....+++|.++ ...=..+.+.|.+.|.+|++..-.-... .......+.++..+..+-. |.+.+++.++
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~ 93 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVD-----SYESCEKLVK 93 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTT-----CHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCC-----CHHHHHHHHH
Confidence 34456666654 2333334455667788877754332221 1222234666666665432 4555554442
Q ss_pred c------CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 181 E------NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 181 ~------~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
. +..+++.+....+.+. ..+.+++++..+
T Consensus 94 ~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 3gdg_A 94 DVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQ 130 (267)
T ss_dssp HHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHH
T ss_pred HHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 1 3344443333222221 235566665554
No 411
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=27.45 E-value=2.7e+02 Score=23.23 Aligned_cols=31 Identities=16% Similarity=0.284 Sum_probs=18.9
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
..+++|.++...=..+++.|.+.|.+|++..
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~ 47 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIAD 47 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEc
Confidence 3566666554444445556667787777654
No 412
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=27.43 E-value=1.7e+02 Score=25.73 Aligned_cols=95 Identities=12% Similarity=0.036 Sum_probs=48.4
Q ss_pred CcEEEcCC-HHHHHHHHHHHhcCCCCeEEEc-CCC-Cc-chHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 110 DDVYLTAG-CKQAIQVILTVLARPGANILLP-KPG-FP-LYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 110 ~~i~~~~g-~~~al~~~~~~l~~~gd~Vl~~-~p~-y~-~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
..|++|.+ |.-+-.+ ++.|.+.|..|.+. ... -. .-.. .....+.+++...+ -|.+.+.+++.+
T Consensus 11 ~~IlVtGatG~iG~~l-~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl-------~d~~~l~~~~~~~ 82 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFV-ATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLI-------NEQEAMEKILKEH 82 (346)
T ss_dssp CCEEEECTTSHHHHHH-HHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCT-------TCHHHHHHHHHHT
T ss_pred CeEEEECCCcHHHHHH-HHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeec-------CCHHHHHHHHhhC
Confidence 46777766 4444443 44555556555443 221 11 1111 12234555444332 267888887753
Q ss_pred CceEEEEeCC-CCCcccccCHHHHHHHHHHHHhcC-cEEE
Q 014631 182 NTVAMVIVNP-GNPCGNVFTYQQLQKIAEKARKLG-IMVI 219 (421)
Q Consensus 182 ~~~~i~~~~p-~nptG~~~~~~~l~~i~~~~~~~~-~~li 219 (421)
+..+|+.+.. .|..| -..+++.|++.+ +..+
T Consensus 83 ~~d~Vi~~a~~~n~~~-------~~~l~~aa~~~g~v~~~ 115 (346)
T 3i6i_A 83 EIDIVVSTVGGESILD-------QIALVKAMKAVGTIKRF 115 (346)
T ss_dssp TCCEEEECCCGGGGGG-------HHHHHHHHHHHCCCSEE
T ss_pred CCCEEEECCchhhHHH-------HHHHHHHHHHcCCceEE
Confidence 4555555443 33332 367888888888 6333
No 413
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=27.38 E-value=2.7e+02 Score=23.18 Aligned_cols=95 Identities=12% Similarity=0.039 Sum_probs=45.0
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE----- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~----- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++..-.-...... ....|.++..+..+-. |.+++++.+..
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~ 82 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVT-----SEEAVIGTVDSVVRDF 82 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHHh
Confidence 3466665554444455566677887777654322111111 1223555666655432 45555544321
Q ss_pred -CceEEEEeCCCC-Cccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGN-PCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~n-ptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+.... +.+. .++.+++++..+
T Consensus 83 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 114 (262)
T 1zem_A 83 GKIDFLFNNAGYQGAFAPVQDYPSDDFARVLT 114 (262)
T ss_dssp SCCCEEEECCCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCccccCCHHHHHHHHH
Confidence 344444333222 2222 245666665544
No 414
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=27.35 E-value=2.1e+02 Score=23.38 Aligned_cols=93 Identities=14% Similarity=0.074 Sum_probs=41.0
Q ss_pred EEEcCCHHHHHHHHHHHhcCCCC-------eEEEcCCCCcchHHHH---hhcCceeEeeeccCCCCccCCHHHHHhhhcc
Q 014631 112 VYLTAGCKQAIQVILTVLARPGA-------NILLPKPGFPLYEANA---RHTRLEIRHFDLLPEKGWEVDLDGLEALADE 181 (421)
Q Consensus 112 i~~~~g~~~al~~~~~~l~~~gd-------~Vl~~~p~y~~~~~~~---~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~ 181 (421)
+++|.++...=..+++.|.+.|. .|++..-.-....... ...+.++..+..+-. |.+.+++.+..
T Consensus 5 vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 79 (244)
T 2bd0_A 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADIS-----DMADVRRLTTH 79 (244)
T ss_dssp EEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTT-----SHHHHHHHHHH
T ss_pred EEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCC-----CHHHHHHHHHH
Confidence 55555443333344455555665 6666543221111111 122555666655432 45555554432
Q ss_pred ------CceEEEEeCCCCCccc--ccCHHHHHHHHH
Q 014631 182 ------NTVAMVIVNPGNPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 ------~~~~i~~~~p~nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+....+.+. ..+.+++++..+
T Consensus 80 ~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 115 (244)
T 2bd0_A 80 IVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMN 115 (244)
T ss_dssp HHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHH
Confidence 3455544433222221 235555655444
No 415
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=27.33 E-value=42 Score=31.22 Aligned_cols=27 Identities=22% Similarity=0.309 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+.||.|-++-..
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 95 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHT 95 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcc
Confidence 499999999999999999999887553
No 416
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.31 E-value=42 Score=31.66 Aligned_cols=27 Identities=26% Similarity=0.276 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-++-..
T Consensus 80 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 106 (480)
T 1ud2_A 80 KAQLERAIGSLKSNDINVYGDVVMNHK 106 (480)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 499999999999999999999887654
No 417
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=27.26 E-value=2.3e+02 Score=25.46 Aligned_cols=16 Identities=31% Similarity=0.416 Sum_probs=8.7
Q ss_pred HHHHHHHHHhcCcEEE
Q 014631 204 LQKIAEKARKLGIMVI 219 (421)
Q Consensus 204 l~~i~~~~~~~~~~li 219 (421)
+.+|..+++++|+.+|
T Consensus 190 lr~L~~~a~~~~~~VI 205 (366)
T 1xp8_A 190 LRKLTAILSKTGTAAI 205 (366)
T ss_dssp HHHHHHHHTTTCCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 4445555566666544
No 418
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=27.26 E-value=2.7e+02 Score=23.24 Aligned_cols=96 Identities=11% Similarity=-0.019 Sum_probs=45.5
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHh---hc--CceeEeeeccCCCCccCCHHHHHhhhcc--
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANAR---HT--RLEIRHFDLLPEKGWEVDLDGLEALADE-- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~---~~--g~~~~~~~~~~~~~~~~d~e~l~~~~~~-- 181 (421)
...+++|.++..-=..+.+.|.+.|.+|++.+-.-........ .. +..+..+..+.. |.+.+++.+..
T Consensus 10 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~g 84 (267)
T 3t4x_A 10 GKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-----TEQGCQDVIEKYP 84 (267)
T ss_dssp TCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-----SHHHHHHHHHHCC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-----CHHHHHHHHHhcC
Confidence 3456666655444444556666788888776533322222221 11 344555544322 45566555542
Q ss_pred CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 ~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 85 KVDILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCSEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCccccCCHHHHHHHHH
Confidence 344444333322222 2345666655544
No 419
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=27.05 E-value=2e+02 Score=23.18 Aligned_cols=58 Identities=3% Similarity=-0.019 Sum_probs=37.3
Q ss_pred HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcC
Q 014631 147 EANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 147 ~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~ 215 (421)
...++..|.+++++..+ +.++++.+.+. .++.+|.++.-.. + +...++++++.+++.+
T Consensus 109 a~~l~~~G~~v~~LG~~------vp~~~l~~~~~~~~~d~v~lS~~~~-~----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 109 AMMLESGGFTVYNLGVD------IEPGKFVEAVKKYQPDIVGMSALLT-T----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHHHTTCEEEECCSS------BCHHHHHHHHHHHCCSEEEEECCSG-G----GTHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEECCCC------CCHHHHHHHHHHcCCCEEEEecccc-c----cHHHHHHHHHHHHhcC
Confidence 34456789998877542 57888877654 4566666554322 2 2367888888888754
No 420
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=27.05 E-value=42 Score=32.02 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-+.-..
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 499999999999999999999887654
No 421
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=26.97 E-value=1.6e+02 Score=25.81 Aligned_cols=54 Identities=17% Similarity=0.134 Sum_probs=36.7
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
.+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++++.+.+. ++.+|.
T Consensus 28 ~dg~iD~~~l~~lv~~li~~Gv~Gl-~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 88 (307)
T 3s5o_A 28 ATAEVDYGKLEENLHKLGTFPFRGF-VVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA 88 (307)
T ss_dssp TTSCBCHHHHHHHHHHHTTSCCSEE-EESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEE-EECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE
Confidence 345689998887553 355555 444454556778999999999988864 455554
No 422
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=26.91 E-value=82 Score=29.42 Aligned_cols=48 Identities=17% Similarity=0.183 Sum_probs=35.5
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
|-+|.-++.++..-+..+|++... .++.++++++.+.|++.|+.+++|
T Consensus 116 FI~d~~Qi~ea~~~GAD~ILLi~a------~l~~~~l~~l~~~a~~lgm~~LvE 163 (452)
T 1pii_A 116 FIIDPYQIYLARYYQADACLLMLS------VLDDDQYRQLAAVAHSLEMGVLTE 163 (452)
T ss_dssp CCCSHHHHHHHHHTTCSEEEEETT------TCCHHHHHHHHHHHHHTTCEEEEE
T ss_pred ccCCHHHHHHHHHcCCCEEEEEcc------cCCHHHHHHHHHHHHHcCCeEEEE
Confidence 567777777655556666655433 356688999999999999988887
No 423
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=26.84 E-value=44 Score=31.08 Aligned_cols=27 Identities=33% Similarity=0.521 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-+.-..
T Consensus 86 ~~df~~lv~~~H~~Gi~VilD~V~NH~ 112 (435)
T 1mxg_A 86 KEELVRLIQTAHAYGIKVIADVVINHR 112 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccc
Confidence 499999999999999999999887553
No 424
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=26.79 E-value=43 Score=31.59 Aligned_cols=27 Identities=22% Similarity=0.247 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-+.-..
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~NH~ 104 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLNHK 104 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcc
Confidence 499999999999999999999887654
No 425
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=26.58 E-value=81 Score=22.22 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=35.2
Q ss_pred cCCHHHHHhhhcc-CceEEEEeCCCCCcccccC-HHHHHHHHHHHHhcCcE-EEEccccc
Q 014631 169 EVDLDGLEALADE-NTVAMVIVNPGNPCGNVFT-YQQLQKIAEKARKLGIM-VISDEVYD 225 (421)
Q Consensus 169 ~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~-~~~l~~i~~~~~~~~~~-li~De~~~ 225 (421)
..+.+.|.+.+.+ +...+++--|-|.-|..-+ .+..+++++..++.++. ..+||-++
T Consensus 37 ~~~~~~l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~lpV~~~DERlT 96 (98)
T 1iv0_A 37 EEDVEALLDFVRREGLGKLVVGLPLRTDLKESAQAGKVLPLVEALRARGVEVELWDERFT 96 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCCCCCSSSCCCSSTTHHHHHHHHHTTCEEEEECCSCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEeeccCCCCCcCHHHHHHHHHHHHHhcCCCCEEEECCCCC
Confidence 3567788887765 6778889999776665422 13344444443333664 45888765
No 426
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=26.32 E-value=3.3e+02 Score=23.87 Aligned_cols=106 Identities=11% Similarity=-0.008 Sum_probs=50.3
Q ss_pred CCCcEEEcCCHHHHHHHHHHHhcC--CCCeEEEcCCCCcc----------hHHHHhhcCceeEeeeccCCCCccCCHHHH
Q 014631 108 SPDDVYLTAGCKQAIQVILTVLAR--PGANILLPKPGFPL----------YEANARHTRLEIRHFDLLPEKGWEVDLDGL 175 (421)
Q Consensus 108 ~~~~i~~~~g~~~al~~~~~~l~~--~gd~Vl~~~p~y~~----------~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l 175 (421)
....|++|.|+...=..++..|.+ .|..|++.+-.-.. ........+.++..+..+- -|.+.+
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~ 83 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADI-----NNPLDL 83 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCT-----TCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCC-----CCHHHH
Confidence 344677776544333444555656 78777765321110 0011122233334443332 266777
Q ss_pred HhhhccCceEEEEeCCCCCcccccCH--------HHHHHHHHHHHhcCcEEE
Q 014631 176 EALADENTVAMVIVNPGNPCGNVFTY--------QQLQKIAEKARKLGIMVI 219 (421)
Q Consensus 176 ~~~~~~~~~~i~~~~p~nptG~~~~~--------~~l~~i~~~~~~~~~~li 219 (421)
+++...+..+|+.+....... .-.. .-...+.+.|++.+..+|
T Consensus 84 ~~~~~~~~D~vih~A~~~~~~-~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 84 RRLEKLHFDYLFHQAAVSDTT-MLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp HHHTTSCCSEEEECCCCCGGG-CCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred HHhhccCCCEEEECCccCCcc-ccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 776233556665544321111 1111 223567888888876544
No 427
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=26.30 E-value=43 Score=32.02 Aligned_cols=26 Identities=23% Similarity=0.432 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
.++++++++.|+++|+.||.|-++-.
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~NH 104 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVNH 104 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred HHHHHHHHHHHHHCCCEEEEEECccC
Confidence 49999999999999999999988754
No 428
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=26.29 E-value=33 Score=24.30 Aligned_cols=23 Identities=17% Similarity=0.356 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHhcCcEEEEcccc
Q 014631 202 QQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~ 224 (421)
.--++|.++|+++|+.++.|..-
T Consensus 42 ~~A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 42 LRAKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHHHcCCeEEECHHH
Confidence 44688999999999999999664
No 429
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=26.25 E-value=45 Score=31.50 Aligned_cols=27 Identities=33% Similarity=0.381 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-+.-..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~NH~ 108 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMNHK 108 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 499999999999999999999887554
No 430
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=26.05 E-value=2.9e+02 Score=23.18 Aligned_cols=96 Identities=11% Similarity=0.013 Sum_probs=47.8
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc-------h---HHHHhhcCceeEeeeccCCCCccCCHHHHHhh
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL-------Y---EANARHTRLEIRHFDLLPEKGWEVDLDGLEAL 178 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~-------~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~ 178 (421)
...+++|.++..-=..+.+.|.+.|.+|++..-.-.. . .......+.++..+..+-. |.+++++.
T Consensus 6 ~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~ 80 (274)
T 3e03_A 6 GKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIR-----EEDQVRAA 80 (274)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTT-----CHHHHHHH
T ss_pred CcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCC-----CHHHHHHH
Confidence 3456666655444445556677788787765432211 1 1222334667777766533 45555544
Q ss_pred hcc------CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 179 ADE------NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 179 ~~~------~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+.. +..+++.+......+ ...+.+++++..+
T Consensus 81 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~ 119 (274)
T 3e03_A 81 VAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQ 119 (274)
T ss_dssp HHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred HHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHh
Confidence 321 334443333322222 2356677766554
No 431
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=25.88 E-value=2.9e+02 Score=23.09 Aligned_cols=98 Identities=8% Similarity=0.013 Sum_probs=49.0
Q ss_pred CCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhc--
Q 014631 107 LSPDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALAD-- 180 (421)
Q Consensus 107 ~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~-- 180 (421)
.....+++|.++...=..+++.|.+.|.+|++..-.-.. ........+.++..+..+-. |.+++++.++
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~ 101 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-----SESDFIEAIQTI 101 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHH
Confidence 334456777665544445556677788777765432211 12223345666666665432 4455554442
Q ss_pred ----cCceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 181 ----ENTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 181 ----~~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+...++.+......+ ...+.+++++..+
T Consensus 102 ~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 102 VQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 1344444433332222 2346666666554
No 432
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=25.70 E-value=83 Score=29.29 Aligned_cols=92 Identities=11% Similarity=0.103 Sum_probs=55.5
Q ss_pred HHHHHHHHHHhcCCCCeEEEcCCCCcc----hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 119 KQAIQVILTVLARPGANILLPKPGFPL----YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 119 ~~al~~~~~~l~~~gd~Vl~~~p~y~~----~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
.+++..+.+.+ ++-+-+++++|.... +....+... +|+--++.+--+++.+.+.+..+..-++..-++.
T Consensus 273 ~e~~~~~~~ll-~~y~i~~IEdPl~~dD~~g~~~L~~~~~-----ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv~q- 345 (439)
T 2akz_A 273 DQLGALYQDFV-RDYPVVSIEDPFDQDDWAAWSKFTANVG-----IQIVGDDLTVTNPKRIERAVEEKACNCLLLKVNQ- 345 (439)
T ss_dssp HHHHHHHHHHH-HHSCEEEEECCSCTTCHHHHHHHHHTCS-----SEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHH-
T ss_pred HHHHHHHHHHH-HhCCCcEEECCCCcccHHHHHHHHhCCC-----CEEEeCCCccCCHHHHHHHHHhCCCCEEEechhh-
Confidence 44555544444 334688999997653 333333322 2332222222378899888876654455555554
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
.|.+ .+..+++++|+++|+.+++
T Consensus 346 iGGi---tea~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 346 IGSV---TEAIQACKLAQENGWGVMV 368 (439)
T ss_dssp HCCH---HHHHHHHHHHHHTTCEEEE
T ss_pred cCCH---HHHHHHHHHHHHCCCeEEe
Confidence 4555 5788999999999997654
No 433
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=25.67 E-value=2.4e+02 Score=22.12 Aligned_cols=46 Identities=7% Similarity=-0.129 Sum_probs=25.7
Q ss_pred HHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCC
Q 014631 120 QAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPE 165 (421)
Q Consensus 120 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~ 165 (421)
+.+...+..+.+.-|.|+++.|...+............+.+++.++
T Consensus 63 ~~l~~~l~~l~~~yD~viiD~~~~~~~~~~~~l~~ad~viiv~~~~ 108 (206)
T 4dzz_A 63 EKDVYGIRKDLADYDFAIVDGAGSLSVITSAAVMVSDLVIIPVTPS 108 (206)
T ss_dssp HHHHHTHHHHTTTSSEEEEECCSSSSHHHHHHHHHCSEEEEEECSC
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCCHHHHHHHHHCCEEEEEecCC
Confidence 5556666666555688888877665433222222334455555544
No 434
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=25.59 E-value=40 Score=35.31 Aligned_cols=27 Identities=26% Similarity=0.476 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-++-..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt 587 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHT 587 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEecccc
Confidence 489999999999999999999988654
No 435
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=25.48 E-value=2e+02 Score=24.62 Aligned_cols=94 Identities=9% Similarity=0.142 Sum_probs=43.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCC---eEEEcCCCCcchHHHHhh-----cCceeEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGA---NILLPKPGFPLYEANARH-----TRLEIRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd---~Vl~~~p~y~~~~~~~~~-----~g~~~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
.+++|.++..-=..+.+.|.+.|. .|++..-.-......... .+.++..+..|-. |.+++++.++.
T Consensus 35 ~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 109 (287)
T 3rku_A 35 TVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDIT-----QAEKIKPFIENL 109 (287)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTT-----CGGGHHHHHHTS
T ss_pred EEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCC-----CHHHHHHHHHHH
Confidence 455665544333344455555554 666654333222222221 2566776666543 44555444432
Q ss_pred -----CceEEEEeCCC-C-Cccc--ccCHHHHHHHHHH
Q 014631 182 -----NTVAMVIVNPG-N-PCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 -----~~~~i~~~~p~-n-ptG~--~~~~~~l~~i~~~ 210 (421)
+..++ +.+.. . +.+. .++.+++++..++
T Consensus 110 ~~~~g~iD~l-VnnAG~~~~~~~~~~~~~~~~~~~~~v 146 (287)
T 3rku_A 110 PQEFKDIDIL-VNNAGKALGSDRVGQIATEDIQDVFDT 146 (287)
T ss_dssp CGGGCSCCEE-EECCCCCCCCCCTTSCCHHHHHHHHHH
T ss_pred HHhcCCCCEE-EECCCcCCCCCCcccCCHHHHHHHHHH
Confidence 23444 44432 2 1222 2466777765543
No 436
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=25.46 E-value=2.4e+02 Score=22.61 Aligned_cols=23 Identities=13% Similarity=0.326 Sum_probs=10.9
Q ss_pred CCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 116 AGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 116 ~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+-.+++..+-. + +.|..|++..
T Consensus 36 ~~l~~~v~~a~~-~-~~~~dVIISR 58 (196)
T 2q5c_A 36 ASLTRASKIAFG-L-QDEVDAIISR 58 (196)
T ss_dssp CCHHHHHHHHHH-H-TTTCSEEEEE
T ss_pred CCHHHHHHHHHH-h-cCCCeEEEEC
Confidence 334445554443 3 4554455544
No 437
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.41 E-value=51 Score=31.13 Aligned_cols=27 Identities=33% Similarity=0.476 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+.||.|-++-..
T Consensus 81 ~~d~~~Lv~~aH~~Gi~VilD~V~NH~ 107 (488)
T 1wza_A 81 LEDFHKLVEAAHQRGIKVIIDLPINHT 107 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccccc
Confidence 499999999999999999999886543
No 438
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=25.34 E-value=3e+02 Score=22.99 Aligned_cols=92 Identities=11% Similarity=0.132 Sum_probs=42.5
Q ss_pred EEEcCC-HHHHHHHHHHHhcCC--CCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEE
Q 014631 112 VYLTAG-CKQAIQVILTVLARP--GANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVI 188 (421)
Q Consensus 112 i~~~~g-~~~al~~~~~~l~~~--gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~ 188 (421)
|++|.+ |.-+-. +++.|.+. |.+|.+..-.-..... ....+..++ ..+. -|.+.+.+++. +...++.
T Consensus 2 ilVtGatG~iG~~-l~~~L~~~~~g~~V~~~~r~~~~~~~-~~~~~~~~~--~~D~-----~d~~~~~~~~~-~~d~vi~ 71 (286)
T 2zcu_A 2 IAITGATGQLGHY-VIESLMKTVPASQIVAIVRNPAKAQA-LAAQGITVR--QADY-----GDEAALTSALQ-GVEKLLL 71 (286)
T ss_dssp EEEESTTSHHHHH-HHHHHTTTSCGGGEEEEESCTTTCHH-HHHTTCEEE--ECCT-----TCHHHHHHHTT-TCSEEEE
T ss_pred EEEEcCCchHHHH-HHHHHHhhCCCceEEEEEcChHhhhh-hhcCCCeEE--EcCC-----CCHHHHHHHHh-CCCEEEE
Confidence 556655 333333 34455554 7666554322111111 122344433 3222 26778887775 3555655
Q ss_pred eCCCCCcccccCHHHHHHHHHHHHhcCc
Q 014631 189 VNPGNPCGNVFTYQQLQKIAEKARKLGI 216 (421)
Q Consensus 189 ~~p~nptG~~~~~~~l~~i~~~~~~~~~ 216 (421)
+....+.. ...-.+.+.+.|++.++
T Consensus 72 ~a~~~~~~---~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 72 ISSSEVGQ---RAPQHRNVINAAKAAGV 96 (286)
T ss_dssp CC-----------CHHHHHHHHHHHHTC
T ss_pred eCCCCchH---HHHHHHHHHHHHHHcCC
Confidence 44322211 11345677888887775
No 439
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=25.28 E-value=2.1e+02 Score=25.36 Aligned_cols=78 Identities=15% Similarity=0.186 Sum_probs=45.8
Q ss_pred cCCCCeEEEcCCCCcch----------HHHHhhcCceeEeeeccCCC-Cc-----cCCHHHHHhhh-ccCceEEEEeCCC
Q 014631 130 ARPGANILLPKPGFPLY----------EANARHTRLEIRHFDLLPEK-GW-----EVDLDGLEALA-DENTVAMVIVNPG 192 (421)
Q Consensus 130 ~~~gd~Vl~~~p~y~~~----------~~~~~~~g~~~~~~~~~~~~-~~-----~~d~e~l~~~~-~~~~~~i~~~~p~ 192 (421)
+++||+|-+..|+.... ...++..|.+++.-+..... ++ .-..++|.+++ ++..++|+.+-..
T Consensus 10 L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rGG 89 (336)
T 3sr3_A 10 LKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIGG 89 (336)
T ss_dssp CCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCCC
T ss_pred CCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEcccc
Confidence 47899999998887531 22345678887765443221 11 11355555555 4567777766666
Q ss_pred CCcccccCHHHHHHH
Q 014631 193 NPCGNVFTYQQLQKI 207 (421)
Q Consensus 193 nptG~~~~~~~l~~i 207 (421)
+-+-.+++.=+...|
T Consensus 90 ~g~~rlL~~lD~~~i 104 (336)
T 3sr3_A 90 MNSNSLLPYIDYDAF 104 (336)
T ss_dssp SCGGGGGGGSCHHHH
T ss_pred ccHHHHhhhcChhHH
Confidence 666667665444444
No 440
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=25.27 E-value=35 Score=24.20 Aligned_cols=24 Identities=29% Similarity=0.319 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHhcCcEEEEccccc
Q 014631 202 QQLQKIAEKARKLGIMVISDEVYD 225 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~~li~De~~~ 225 (421)
.--.+|.++|+++|+.++.|-.-.
T Consensus 27 ~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 27 QRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHTCCEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCeecCHHHH
Confidence 447889999999999999996543
No 441
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=25.20 E-value=3.2e+02 Score=23.36 Aligned_cols=126 Identities=15% Similarity=0.158 Sum_probs=56.6
Q ss_pred CCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHHhcCCCCeEEE---cCCCCcchHHHHhhcCceeEe
Q 014631 83 SPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTVLARPGANILL---PKPGFPLYEANARHTRLEIRH 159 (421)
Q Consensus 83 ~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~---~~p~y~~~~~~~~~~g~~~~~ 159 (421)
...+|-......+++-+.. -++ +++++.++..+. .+..... .-.|++ .+|.-..........|.++..
T Consensus 49 ~~a~gd~~~~~~~~~~l~~-----~~~-DlIiai~t~aa~-a~~~~~~--~iPVVf~~v~dp~~~~l~~~~~~~g~nvtG 119 (302)
T 3lkv_A 49 KTAQGNPAIAVQIARQFVG-----ENP-DVLVGIATPTAQ-ALVSATK--TIPIVFTAVTDPVGAKLVKQLEQPGKNVTG 119 (302)
T ss_dssp EECTTCHHHHHHHHHHHHT-----TCC-SEEEEESHHHHH-HHHHHCS--SSCEEEEEESCTTTTTSCSCSSSCCSSEEE
T ss_pred EeCCCCHHHHHHHHHHHHh-----cCC-cEEEEcCCHHHH-HHHhhcC--CCCeEEEecCCcchhhhcccccCCCCcEEE
Confidence 3445555544455444432 233 466666655443 3333322 222332 344333332222333444444
Q ss_pred eeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEccc
Q 014631 160 FDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISDEV 223 (421)
Q Consensus 160 ~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 223 (421)
+.- .....-.++.+.+++....++.++.+++.+.. . ...+.+.+.++++|+-++.-.+
T Consensus 120 v~~--~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s-~---~~~~~~~~~~~~~g~~~v~~~~ 177 (302)
T 3lkv_A 120 LSD--LSPVEQHVELIKEILPNVKSIGVVYNPGEANA-V---SLMELLKLSAAKHGIKLVEATA 177 (302)
T ss_dssp EEC--CCCHHHHHHHHHHHSTTCCEEEEEECTTCHHH-H---HHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEC--CcCHHHHHHHHHHhCCCCCEEEEEeCCCcccH-H---HHHHHHHHHHHHcCCEEEEEec
Confidence 421 11111123333333322334446666654332 2 4566777888899987775433
No 442
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=25.18 E-value=1.8e+02 Score=28.00 Aligned_cols=78 Identities=10% Similarity=0.066 Sum_probs=44.5
Q ss_pred CCCCeEEEcCCCCcchH-------HHHhhcCceeEeeeccC-CCCccCCHHHHHhhhcc-CceEEEEeCCCCCcccccCH
Q 014631 131 RPGANILLPKPGFPLYE-------ANARHTRLEIRHFDLLP-EKGWEVDLDGLEALADE-NTVAMVIVNPGNPCGNVFTY 201 (421)
Q Consensus 131 ~~gd~Vl~~~p~y~~~~-------~~~~~~g~~~~~~~~~~-~~~~~~d~e~l~~~~~~-~~~~i~~~~p~nptG~~~~~ 201 (421)
+++|.|++.....++.. ......|++++...... .-....|.+++...++. +++-++.++. -.
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~SgHa~~~eL~~~i~~~~Pk~vipvHG-----e~--- 408 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASGHASQEELKLILNLTTPRFFLPWHG-----EV--- 408 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCSSCCHHHHHHHHHHHCCSEEEEESB-----CH---
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeCCCCHHHHHHHHHhcCCCEEEEEcC-----CH---
Confidence 68899999887666642 23345677765432000 01123467777665432 3555655443 22
Q ss_pred HHHHHHHHHHHhcCc
Q 014631 202 QQLQKIAEKARKLGI 216 (421)
Q Consensus 202 ~~l~~i~~~~~~~~~ 216 (421)
..+.++++++++.|+
T Consensus 409 ~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 409 RHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHcCC
Confidence 557777788887664
No 443
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=25.13 E-value=48 Score=31.17 Aligned_cols=28 Identities=18% Similarity=0.393 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-+.-...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 4999999999999999999998876543
No 444
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=25.12 E-value=2.7e+02 Score=22.34 Aligned_cols=95 Identities=12% Similarity=0.010 Sum_probs=45.8
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVN 190 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~ 190 (421)
.|++|.++...=..+++.|.+.|.+|.+..-.-... ......+..+..+- -|.+.+++.+. +..+|+.+.
T Consensus 6 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~~~~~~~~~~~Dl-----~d~~~~~~~~~-~~d~vi~~a 75 (227)
T 3dhn_A 6 KIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI----KIENEHLKVKKADV-----SSLDEVCEVCK-GADAVISAF 75 (227)
T ss_dssp EEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC----CCCCTTEEEECCCT-----TCHHHHHHHHT-TCSEEEECC
T ss_pred EEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc----hhccCceEEEEecC-----CCHHHHHHHhc-CCCEEEEeC
Confidence 577776544444445556667787777765332211 11112333333322 26788888776 455565443
Q ss_pred CCC---CcccccCHHHHHHHHHHHHhcC
Q 014631 191 PGN---PCGNVFTYQQLQKIAEKARKLG 215 (421)
Q Consensus 191 p~n---ptG~~~~~~~l~~i~~~~~~~~ 215 (421)
... +.-......-...+.+.|++.+
T Consensus 76 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 103 (227)
T 3dhn_A 76 NPGWNNPDIYDETIKVYLTIIDGVKKAG 103 (227)
T ss_dssp CC------CCSHHHHHHHHHHHHHHHTT
T ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHhC
Confidence 221 1100011233556666666654
No 445
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=25.08 E-value=48 Score=31.12 Aligned_cols=27 Identities=33% Similarity=0.532 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-++-..
T Consensus 96 ~~df~~lv~~~h~~Gi~VilD~V~NH~ 122 (475)
T 2z1k_A 96 NEALRHLLEVAHAHGVRVILDGVFNHT 122 (475)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecccc
Confidence 499999999999999999999887653
No 446
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=25.00 E-value=2.4e+02 Score=23.98 Aligned_cols=54 Identities=11% Similarity=-0.021 Sum_probs=27.0
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCC-cchHHHHh----hcCceeEeeeccC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPKPGF-PLYEANAR----HTRLEIRHFDLLP 164 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y-~~~~~~~~----~~g~~~~~~~~~~ 164 (421)
.+++|.++...=..+.+.|.+.|.+|++..-.- ........ ..|.++..+..+-
T Consensus 25 ~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv 83 (288)
T 2x9g_A 25 AAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADL 83 (288)
T ss_dssp EEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCC
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeec
Confidence 456665554443445556667787777654332 21111111 3355566665543
No 447
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=24.92 E-value=44 Score=31.47 Aligned_cols=28 Identities=18% Similarity=0.434 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+.||.|-++-...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (471)
T 1jae_A 74 ESAFTDMTRRCNDAGVRIYVDAVINHMT 101 (471)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 4999999999999999999998876543
No 448
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=24.89 E-value=1.2e+02 Score=25.20 Aligned_cols=96 Identities=13% Similarity=0.086 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcc--hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-----CceEEEEeC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPL--YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE-----NTVAMVIVN 190 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~--~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~-----~~~~i~~~~ 190 (421)
+|.++..+.+. ...|.+|++..|.... ...++...|.....+++. ..+++.+.+.. +..+|++-.
T Consensus 26 TT~ll~~~~r~-~~~g~kVli~~~~~d~r~~~~i~srlG~~~~~~~~~-------~~~~i~~~i~~~~~~~~~dvViIDE 97 (223)
T 2b8t_A 26 TAELIRRLHRL-EYADVKYLVFKPKIDTRSIRNIQSRTGTSLPSVEVE-------SAPEILNYIMSNSFNDETKVIGIDE 97 (223)
T ss_dssp HHHHHHHHHHH-HHTTCCEEEEEECCCGGGCSSCCCCCCCSSCCEEES-------STHHHHHHHHSTTSCTTCCEEEECS
T ss_pred HHHHHHHHHHH-HhcCCEEEEEEeccCchHHHHHHHhcCCCccccccC-------CHHHHHHHHHHHhhCCCCCEEEEec
Confidence 35555554444 3567777777555432 112333344433222221 22344333322 356777777
Q ss_pred CCCCcccccCHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 191 PGNPCGNVFTYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 191 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++ ++.+.++.+..++.. |+.+|.=.--.+|
T Consensus 98 aQ~-----l~~~~ve~l~~L~~~-gi~Vil~Gl~~df 128 (223)
T 2b8t_A 98 VQF-----FDDRICEVANILAEN-GFVVIISGLDKNF 128 (223)
T ss_dssp GGG-----SCTHHHHHHHHHHHT-TCEEEEECCSBCT
T ss_pred Ccc-----CcHHHHHHHHHHHhC-CCeEEEEeccccc
Confidence 665 555677777777764 8888876555553
No 449
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=24.89 E-value=3.5e+02 Score=24.00 Aligned_cols=33 Identities=18% Similarity=0.379 Sum_probs=20.3
Q ss_pred cEEEcCC---HHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 111 DVYLTAG---CKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 111 ~i~~~~g---~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
.|+...| +.+++.++-.+- +-| |.|++..|.|.
T Consensus 102 pViaGvg~~st~eai~la~~A~-~~Gadavlv~~P~Y~ 138 (343)
T 2v9d_A 102 PVLIGTGGTNARETIELSQHAQ-QAGADGIVVINPYYW 138 (343)
T ss_dssp CEEEECCSSCHHHHHHHHHHHH-HHTCSEEEEECCSSS
T ss_pred cEEEecCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 3555433 566666554433 334 89999999885
No 450
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=24.76 E-value=1.3e+02 Score=24.04 Aligned_cols=95 Identities=16% Similarity=0.096 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCcc---hHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFPL---YEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNP 194 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~~---~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~np 194 (421)
+|+++..+.+.. ..|.+|++..|.-.. ...+....|......++.. .+++.+.+..+...|++-..++
T Consensus 22 TT~ll~~a~r~~-~~g~kV~v~k~~~d~r~~~~~i~s~~g~~~~a~~~~~-------~~~i~~~~~~~~dvViIDEaqf- 92 (191)
T 1xx6_A 22 SEELIRRIRRAK-IAKQKIQVFKPEIDNRYSKEDVVSHMGEKEQAVAIKN-------SREILKYFEEDTEVIAIDEVQF- 92 (191)
T ss_dssp HHHHHHHHHHHH-HTTCCEEEEEEC-------CEEECTTSCEEECEEESS-------STHHHHHCCTTCSEEEECSGGG-
T ss_pred HHHHHHHHHHHH-HCCCEEEEEEeccCccchHHHHHhhcCCceeeEeeCC-------HHHHHHHHhccCCEEEEECCCC-
Confidence 356666555544 567777776544321 1122334454443333321 1345444443456777766555
Q ss_pred cccccCHHHHHHHHHHHHhcCcEEEEcccccc
Q 014631 195 CGNVFTYQQLQKIAEKARKLGIMVISDEVYDH 226 (421)
Q Consensus 195 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 226 (421)
++++.++.+.+++.. |+.+|+=.--.+
T Consensus 93 ----l~~~~v~~l~~l~~~-~~~Vi~~Gl~~d 119 (191)
T 1xx6_A 93 ----FDDEIVEIVNKIAES-GRRVICAGLDMD 119 (191)
T ss_dssp ----SCTHHHHHHHHHHHT-TCEEEEEECSBC
T ss_pred ----CCHHHHHHHHHHHhC-CCEEEEEecccc
Confidence 555667777777665 888887433333
No 451
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=24.74 E-value=3.5e+02 Score=23.64 Aligned_cols=33 Identities=15% Similarity=0.259 Sum_probs=19.3
Q ss_pred cEEEcC---CHHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 111 DVYLTA---GCKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 111 ~i~~~~---g~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
.|+... ++.+++.++-.+- +-| |.|++..|.|+
T Consensus 82 pviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 82 PIMAGVGAHSTRQVLEHINDAS-VAGANYVLVLPPAYF 118 (318)
T ss_dssp CEEEECCCSSHHHHHHHHHHHH-HHTCSEEEECCCCC-
T ss_pred cEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEEeCCccc
Confidence 355443 4566666554433 334 89999998775
No 452
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=24.71 E-value=1.4e+02 Score=25.68 Aligned_cols=48 Identities=8% Similarity=0.237 Sum_probs=32.7
Q ss_pred ccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEEc
Q 014631 168 WEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVISD 221 (421)
Q Consensus 168 ~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 221 (421)
|.+|..+++.+..-+..+|++... .++.++++++.+.|+++|+.++++
T Consensus 121 fiid~~qv~~A~~~GAD~VlLi~a------~l~~~~l~~l~~~a~~lGl~~lve 168 (272)
T 3qja_A 121 FVVQPYQIHEARAHGADMLLLIVA------ALEQSVLVSMLDRTESLGMTALVE 168 (272)
T ss_dssp CCCSHHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred cccCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHCCCcEEEE
Confidence 556776677766556666655333 234577888888888888877665
No 453
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=24.70 E-value=1.5e+02 Score=25.46 Aligned_cols=72 Identities=15% Similarity=0.171 Sum_probs=46.4
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKA 211 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~ 211 (421)
+|++|.+.-. + +........+.++..+..++..+ ....++.+.++. ...++++ ||..+-...+.+|.+.|
T Consensus 140 ~g~kV~vIG~-~-P~i~~~l~~~~~v~V~d~~p~~g-~~p~~~~e~ll~-~aD~vii------TGsTlvN~Ti~~lL~~~ 209 (270)
T 2h1q_A 140 KGKKVGVVGH-F-PHLESLLEPICDLSILEWSPEEG-DYPLPASEFILP-ECDYVYI------TCASVVDKTLPRLLELS 209 (270)
T ss_dssp TTSEEEEESC-C-TTHHHHHTTTSEEEEEESSCCTT-CEEGGGHHHHGG-GCSEEEE------ETHHHHHTCHHHHHHHT
T ss_pred CCCEEEEECC-C-HHHHHHHhCCCCEEEEECCCCCC-CCChHHHHHHhh-cCCEEEE------EeeeeecCCHHHHHHhC
Confidence 6788887765 2 43333334578888888877644 223344555554 4555554 77777777799999999
Q ss_pred Hh
Q 014631 212 RK 213 (421)
Q Consensus 212 ~~ 213 (421)
++
T Consensus 210 ~~ 211 (270)
T 2h1q_A 210 RN 211 (270)
T ss_dssp TT
T ss_pred cc
Confidence 74
No 454
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=24.66 E-value=2.7e+02 Score=22.70 Aligned_cols=65 Identities=17% Similarity=0.186 Sum_probs=32.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEc-CCCCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLP-KPGFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++. ...-..... .....+.++..+..+-. |.+.+++.+
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~ 74 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVK-----NPEDVENMV 74 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTT-----SHHHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHH
Confidence 346666554443344555666778777765 332222222 12233555666655432 455665544
No 455
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=24.62 E-value=1.6e+02 Score=26.38 Aligned_cols=18 Identities=39% Similarity=0.372 Sum_probs=13.0
Q ss_pred HHHHHHHHHHhcCcEEEE
Q 014631 203 QLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 203 ~l~~i~~~~~~~~~~li~ 220 (421)
.+..|..+++++|+.+|+
T Consensus 176 ~L~~L~~lak~~~~tVI~ 193 (356)
T 3hr8_A 176 ALRKIAGSVNKSKAVVIF 193 (356)
T ss_dssp HHHHHHHHHHTSSCEEEE
T ss_pred HHHHHHHHHHhcCCEEEE
Confidence 456677888888886654
No 456
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=24.62 E-value=1.8e+02 Score=25.41 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=20.2
Q ss_pred cEEEcC---CHHHHHHHHHHHhcCCC-CeEEEcCCCCcc
Q 014631 111 DVYLTA---GCKQAIQVILTVLARPG-ANILLPKPGFPL 145 (421)
Q Consensus 111 ~i~~~~---g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~ 145 (421)
.|+... ++.+++.++-.+- +-| |.|++..|.|..
T Consensus 86 pviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~~ 123 (304)
T 3l21_A 86 RVIAGAGTYDTAHSIRLAKACA-AEGAHGLLVVTPYYSK 123 (304)
T ss_dssp EEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSSC
T ss_pred eEEEeCCCCCHHHHHHHHHHHH-HcCCCEEEECCCCCCC
Confidence 355433 3556666554333 334 899999988853
No 457
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=24.61 E-value=3.5e+02 Score=23.52 Aligned_cols=51 Identities=6% Similarity=0.211 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHhhhCCCCCCCC-cEEEc---CCHHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 89 LPARRAIADYLNSELPCKLSPD-DVYLT---AGCKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~~~~~~~-~i~~~---~g~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
.+=|..+.+...+. +... .|+.. +++.+++.++-.+- +-| |-|++..|.|.
T Consensus 66 ~~Er~~v~~~~~~~----~~gr~pviaGvg~~~t~~ai~la~~A~-~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 66 SSERLEVVSRVRQA----MPKNRLLLAGSGCESTQATVEMTVSMA-QVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHHHHHHHHHHHT----SCTTSEEEEECCCSSHHHHHHHHHHHH-HTTCSEEEEECCCTT
T ss_pred HHHHHHHHHHHHHH----cCCCCcEEEecCCCCHHHHHHHHHHHH-HcCCCEEEEcCCCcC
Confidence 45555555555442 2222 24433 34556666554433 344 89999888885
No 458
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=24.59 E-value=1.8e+02 Score=25.21 Aligned_cols=47 Identities=17% Similarity=0.057 Sum_probs=34.7
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+.
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl-~~~GttGE~~~Ls~~Er~~v~~~~~~~ 68 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSV-TLFGTTGEGCSVGSRERQAILSSFIAA 68 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEE-EESSTTTTGGGSCHHHHHHHHHHHHHT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEE-EECccccChhhCCHHHHHHHHHHHHHH
Confidence 45799999887653 455665 445555667789999999999998864
No 459
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=24.53 E-value=3.2e+02 Score=23.46 Aligned_cols=32 Identities=25% Similarity=0.324 Sum_probs=19.4
Q ss_pred EEEcCC---HHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 112 VYLTAG---CKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 112 i~~~~g---~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
|+...| +.+++.++-.+- +.| |.|++..|.|.
T Consensus 72 viaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~ 107 (289)
T 2yxg_A 72 VIAGAGSNCTEEAIELSVFAE-DVGADAVLSITPYYN 107 (289)
T ss_dssp EEEECCCSSHHHHHHHHHHHH-HHTCSEEEEECCCSS
T ss_pred EEEeCCCCCHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 554433 456666544332 334 89999999885
No 460
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=24.53 E-value=2.9e+02 Score=22.62 Aligned_cols=95 Identities=14% Similarity=0.082 Sum_probs=45.3
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCC-CcchHHH---HhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPG-FPLYEAN---ARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~-y~~~~~~---~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++...=..+.+.|.+.|.+|++..-. -...... ....+.++..+..+-. |.+++++.+..
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLA-----TSEACQQLVDEFVAK 82 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 356666554443344555666778777765433 2222222 2223556666655432 55666555431
Q ss_pred --CceEEEEeCCC-CCccc--ccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPG-NPCGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~-nptG~--~~~~~~l~~i~~ 209 (421)
+..+++.+... .+.+. ..+.+++++..+
T Consensus 83 ~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~ 115 (258)
T 3afn_B 83 FGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMD 115 (258)
T ss_dssp HSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCcCCcCccccCCHHHHHHHHH
Confidence 34555444332 22222 234455555443
No 461
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=24.51 E-value=50 Score=31.61 Aligned_cols=28 Identities=29% Similarity=0.368 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 92 ~~dfk~Lv~~aH~~GI~VilD~V~NHt~ 119 (527)
T 1gcy_A 92 DAQLRQAASALGGAGVKVLYDVVPNHMN 119 (527)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeecCcC
Confidence 4999999999999999999998876544
No 462
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=24.47 E-value=1.7e+02 Score=25.29 Aligned_cols=47 Identities=13% Similarity=0.128 Sum_probs=34.0
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...++ ...++.-+..++.++.+++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~-~~GttGE~~~Ls~eEr~~v~~~~~~~ 64 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLF-VNGTTGLGPSLSPEEKLENLKAVYDV 64 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEE-ESSTTTTGGGSCHHHHHHHHHHHHTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEE-ECccccChhhCCHHHHHHHHHHHHHH
Confidence 45689998877653 4556654 45555566788999999999988864
No 463
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.45 E-value=2.9e+02 Score=22.47 Aligned_cols=94 Identities=7% Similarity=-0.013 Sum_probs=44.1
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCC--CeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-------
Q 014631 111 DVYLTAGCKQAIQVILTVLARPG--ANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------- 181 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~g--d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------- 181 (421)
.+++|.++...=..+++.|.+.| .+|++..-.-..........+.++..+..+-. |.+.+++.+..
T Consensus 5 ~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~~g~ 79 (250)
T 1yo6_A 5 SVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVT-----CDKSLDTFVSKVGEIVGS 79 (250)
T ss_dssp EEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTT-----CHHHHHHHHHHHHHHHGG
T ss_pred EEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecC-----CHHHHHHHHHHHHHhcCC
Confidence 46666555443345556676778 77776543322222222212444555554432 44555544431
Q ss_pred -CceEEEEeCCCCC-ccc--ccCHHHHHHHHH
Q 014631 182 -NTVAMVIVNPGNP-CGN--VFTYQQLQKIAE 209 (421)
Q Consensus 182 -~~~~i~~~~p~np-tG~--~~~~~~l~~i~~ 209 (421)
+..+++.+..... .+. ..+.+++++..+
T Consensus 80 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~ 111 (250)
T 1yo6_A 80 DGLSLLINNAGVLLSYGTNTEPNRAVIAEQLD 111 (250)
T ss_dssp GCCCEEEECCCCCCCBCTTSCCCHHHHHHHHH
T ss_pred CCCcEEEECCcccCCCcccccCCHHHHHHHHH
Confidence 3455544433222 222 234566655544
No 464
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=24.44 E-value=99 Score=26.06 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=32.5
Q ss_pred HHHHHhhhccCceEEEEeCCCCC----cccccCH----HHHHHHHHHHHhcCcEEEEcccc
Q 014631 172 LDGLEALADENTVAMVIVNPGNP----CGNVFTY----QQLQKIAEKARKLGIMVISDEVY 224 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~np----tG~~~~~----~~l~~i~~~~~~~~~~li~De~~ 224 (421)
.+.+++++..+...+-+=.++.+ +| .++. +..+++.++|+++|+.+|+++-+
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHCCCCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCHH
Confidence 45566677766666666555532 01 1222 23477899999999988886543
No 465
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=24.43 E-value=2.1e+02 Score=24.40 Aligned_cols=93 Identities=11% Similarity=0.160 Sum_probs=38.7
Q ss_pred HHHHHHhcCCC-CeEEEcCCCCc---chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCCCcccc
Q 014631 123 QVILTVLARPG-ANILLPKPGFP---LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGNPCGNV 198 (421)
Q Consensus 123 ~~~~~~l~~~g-d~Vl~~~p~y~---~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~nptG~~ 198 (421)
...++.+.+.| |.|++++-.+- .+...++..|.+.+.+-. ++ -+.+.++...+.....+.+.+-...||..
T Consensus 113 e~f~~~~~~aGvdgvii~Dlp~ee~~~~~~~~~~~gl~~i~lia-P~----t~~eri~~i~~~~~gfvY~vS~~GvTG~~ 187 (267)
T 3vnd_A 113 DEFYTKAQAAGVDSVLIADVPVEESAPFSKAAKAHGIAPIFIAP-PN----ADADTLKMVSEQGEGYTYLLSRAGVTGTE 187 (267)
T ss_dssp HHHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEECEEC-TT----CCHHHHHHHHHHCCSCEEESCCCCCC---
T ss_pred HHHHHHHHHcCCCEEEeCCCCHhhHHHHHHHHHHcCCeEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEecCCCCCCc
Confidence 44444444444 66666654332 234555666666544322 11 13345554443333344443444445543
Q ss_pred c-CHHHHHHHHHHHHhc-CcEEEE
Q 014631 199 F-TYQQLQKIAEKARKL-GIMVIS 220 (421)
Q Consensus 199 ~-~~~~l~~i~~~~~~~-~~~li~ 220 (421)
- -..++.++++.++++ ++.+++
T Consensus 188 ~~~~~~~~~~v~~vr~~~~~pv~v 211 (267)
T 3vnd_A 188 SKAGEPIENILTQLAEFNAPPPLL 211 (267)
T ss_dssp -----CHHHHHHHHHTTTCCCEEE
T ss_pred cCCcHHHHHHHHHHHHhcCCCEEE
Confidence 1 112344444444443 344443
No 466
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=24.39 E-value=3e+02 Score=23.15 Aligned_cols=96 Identities=13% Similarity=0.071 Sum_probs=46.4
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHH---HhhcCc---eeEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEAN---ARHTRL---EIRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~---~~~~g~---~~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
...+++|.|+..-=..+.+.|.+.|.+|++.+-.-...... ....+. ++..+..+-. |.+++++.++.
T Consensus 11 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~ 85 (281)
T 3svt_A 11 DRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDIT-----NEDETARAVDAV 85 (281)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCC-----CHHHHHHHHHHH
Confidence 34566666554444455566777888887765332222222 222333 5555554432 45555554432
Q ss_pred -----CceEEEEeCCC-CCcc--cccCHHHHHHHHH
Q 014631 182 -----NTVAMVIVNPG-NPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 -----~~~~i~~~~p~-nptG--~~~~~~~l~~i~~ 209 (421)
+...++.+... .+.+ ...+.+++++..+
T Consensus 86 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 121 (281)
T 3svt_A 86 TAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVD 121 (281)
T ss_dssp HHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHH
Confidence 33444433322 2222 2356666666544
No 467
>3faw_A Reticulocyte binding protein; TIM barrel, beta barrel, hydrolase, cell WALL, peptidoglycan-anchor, secreted; 2.10A {Streptococcus agalactiae COH1} PDB: 3fax_A*
Probab=24.34 E-value=47 Score=34.16 Aligned_cols=27 Identities=33% Similarity=0.535 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
.++++++++.|+++|+-||.|-++-..
T Consensus 369 ~~efk~lV~~~H~~GI~VILDvV~NH~ 395 (877)
T 3faw_A 369 IAELKQLIHDIHKRGMGVILDVVYNHT 395 (877)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeeccc
Confidence 399999999999999999999998543
No 468
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=24.23 E-value=1.7e+02 Score=25.42 Aligned_cols=57 Identities=9% Similarity=0.077 Sum_probs=0.0
Q ss_pred eEeeeccCCCCccCCHHHHHhhh----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 157 IRHFDLLPEKGWEVDLDGLEALA----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 157 ~~~~~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+..+-+.+..+|.+.+++.+ ..+...+ +...++.-+..++.++.+++.+.+.+.
T Consensus 12 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl-~~~GttGE~~~Ls~~Er~~v~~~~~~~ 72 (297)
T 3flu_A 12 LVALITPMNQDGSIHYEQLRDLIDWHIENGTDGI-VAVGTTGESATLSVEEHTAVIEAVVKH 72 (297)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEE-EESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEE-EeCccccCcccCCHHHHHHHHHHHHHH
No 469
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=24.17 E-value=1.1e+02 Score=22.58 Aligned_cols=39 Identities=18% Similarity=0.273 Sum_probs=25.4
Q ss_pred HHHHHhhhccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 172 LDGLEALADENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 172 ~e~l~~~~~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
++.++++...+.+.+++ ++ |.. =+++.++|+++|+.++-
T Consensus 72 ~~~v~e~~~~g~k~v~~-~~----G~~-----~~e~~~~a~~~Girvv~ 110 (122)
T 3ff4_A 72 LSEYNYILSLKPKRVIF-NP----GTE-----NEELEEILSENGIEPVI 110 (122)
T ss_dssp GGGHHHHHHHCCSEEEE-CT----TCC-----CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCCEEEE-CC----CCC-----hHHHHHHHHHcCCeEEC
Confidence 44556665567777654 33 322 15788899999999884
No 470
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=24.04 E-value=3.6e+02 Score=23.44 Aligned_cols=102 Identities=9% Similarity=-0.043 Sum_probs=49.2
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHH---HHhhc-C----ceeEeeeccCCCCccCCHHHHHhhhc
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEA---NARHT-R----LEIRHFDLLPEKGWEVDLDGLEALAD 180 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~---~~~~~-g----~~~~~~~~~~~~~~~~d~e~l~~~~~ 180 (421)
...|++|.++...=..+++.|.+.|..|.+..-.-..... ..... + .++..+..+- -|.+.+++++.
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl-----~d~~~~~~~~~ 99 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDI-----RDLTTCEQVMK 99 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCT-----TCHHHHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccC-----CCHHHHHHHhc
Confidence 4577777654333334445565678777665332221111 11111 0 1233343322 26788888776
Q ss_pred cCceEEEEeCCC-CCcccccCH--------HHHHHHHHHHHhcCc
Q 014631 181 ENTVAMVIVNPG-NPCGNVFTY--------QQLQKIAEKARKLGI 216 (421)
Q Consensus 181 ~~~~~i~~~~p~-nptG~~~~~--------~~l~~i~~~~~~~~~ 216 (421)
+..+|+.+... ++....-.. .-...+++.|++.++
T Consensus 100 -~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 100 -GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp -TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred -CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 55666555442 111111111 123457888888875
No 471
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=23.95 E-value=3.1e+02 Score=22.74 Aligned_cols=65 Identities=14% Similarity=0.005 Sum_probs=32.1
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC-CCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhh
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALA 179 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~ 179 (421)
..+++|.++..-=..+.+.|.+.|.+|++..- .-..... .....+.++..+..+-. |.+.+++.+
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~ 90 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADIS-----KPSEVVALF 90 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHH
Confidence 34666655444334455566677877766433 2111111 12223555666655432 555665544
No 472
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=23.84 E-value=50 Score=31.14 Aligned_cols=28 Identities=21% Similarity=0.426 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (484)
T 2aaa_A 97 ADNLKSLSDALHARGMYLMVDVVPDHMG 124 (484)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcCCcC
Confidence 4999999999999999999998876544
No 473
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.81 E-value=1.8e+02 Score=25.61 Aligned_cols=54 Identities=9% Similarity=0.081 Sum_probs=37.7
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
++..+|.+.+++.++ .+...+ +...++.-+..++.++.+++++.+.+. ++.+|.
T Consensus 36 ~dg~iD~~~l~~li~~li~~Gv~Gl-~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpVia 96 (315)
T 3si9_A 36 DNGAIDEKAFCNFVEWQITQGINGV-SPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVA 96 (315)
T ss_dssp TTSCBCHHHHHHHHHHHHHTTCSEE-ECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEE-EeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 345799999987653 456666 445565667789999999999988764 344443
No 474
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.80 E-value=3.2e+02 Score=22.79 Aligned_cols=97 Identities=11% Similarity=-0.046 Sum_probs=47.1
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhh----cC-ceeEeeeccCCCCccCCHHHHHhhhcc--
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARH----TR-LEIRHFDLLPEKGWEVDLDGLEALADE-- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~----~g-~~~~~~~~~~~~~~~~d~e~l~~~~~~-- 181 (421)
...+++|.++...=..+.+.|.+.|.+|++.+-.-......... .+ .++..+..+-. |.+++++.++.
T Consensus 8 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 82 (265)
T 3lf2_A 8 EAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVL-----DALQVRAFAEACE 82 (265)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCC-----CHHHHHHHHHHHH
Confidence 34566666555444455566777888887765432222222211 22 23555555432 44555444321
Q ss_pred ----CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 ----NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 ----~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+....+.+. ..+.+++++..++
T Consensus 83 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 117 (265)
T 3lf2_A 83 RTLGCASILVNNAGQGRVSTFAETTDEAWSEELQL 117 (265)
T ss_dssp HHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3444443333333332 3566777766654
No 475
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=23.66 E-value=25 Score=24.29 Aligned_cols=82 Identities=21% Similarity=0.295 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHhhhCCCCCCCCcEEEcCCHHHHHHHHHHH----h---cCCCCeE
Q 014631 64 PVAADAVVDAVRSAEFDCYSPSVGILPARRAIADYLNSELPCKLSPDDVYLTAGCKQAIQVILTV----L---ARPGANI 136 (421)
Q Consensus 64 ~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~l~~~~~~~~~~~~i~~~~g~~~al~~~~~~----l---~~~gd~V 136 (421)
|.+++...+.+...+.+.-.|...-+...+-|-+||++ .|.++++++| ++.|.+++.+.-+.- . ...|.+|
T Consensus 10 pavIdKALDFI~~M~tSas~P~sMdESTAKGifKyL~e-lGvPas~~dv-~aRg~qegWn~gFT~k~~gWAek~esGer~ 87 (115)
T 2es9_A 10 PTAIEKALDFIGGMNTSASVPHSMDESTAKGILKYLHD-LGVPVSPEVV-VARGEQEGWNPEFTKKVAGWAEKVASGNRI 87 (115)
T ss_dssp -CHHHHHHHHHHTSCTTCSSCCHHHHHHHHHHHHHHHH-TTCCCCHHHH-HHHHHHTTCCHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHhcccccCCCCCCccchHHHHHHHHHHHH-cCCCCCHHHH-HHhcccccCChhHHHHHHHHHHHhccCCee
Confidence 34556556666655443333444445677778888865 6767666554 345555554433311 1 2478999
Q ss_pred EEcCCCCcchH
Q 014631 137 LLPKPGFPLYE 147 (421)
Q Consensus 137 l~~~p~y~~~~ 147 (421)
++-+|.|.+.+
T Consensus 88 vIKnPEyFstY 98 (115)
T 2es9_A 88 LIKNPEYFSTY 98 (115)
T ss_dssp CCSSGGGSCHH
T ss_pred eecChHHHHHH
Confidence 99999998753
No 476
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=23.63 E-value=3.3e+02 Score=22.85 Aligned_cols=95 Identities=9% Similarity=0.002 Sum_probs=46.6
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEc-CCCCcch---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLP-KPGFPLY---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~-~p~y~~~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++. ...-... .......|.++..+..+-. |.+++++.++.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVS-----DPAAVRRLFATAEEA 102 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHHHH
Confidence 345666555444444556666778887764 2222111 1222344656666665432 45555554431
Q ss_pred --CceEEEEeCC-CCCccc--ccCHHHHHHHHHH
Q 014631 182 --NTVAMVIVNP-GNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 --~~~~i~~~~p-~nptG~--~~~~~~l~~i~~~ 210 (421)
+..++ +.+. ..+.+. ..+.+++++..++
T Consensus 103 ~g~iD~l-vnnAG~~~~~~~~~~~~~~~~~~~~v 135 (267)
T 3u5t_A 103 FGGVDVL-VNNAGIMPLTTIAETGDAVFDRVIAV 135 (267)
T ss_dssp HSCEEEE-EECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred cCCCCEE-EECCCCCCCCChhhCCHHHHHHHHHH
Confidence 33434 4443 332222 3466667765553
No 477
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=23.55 E-value=2e+02 Score=24.91 Aligned_cols=52 Identities=15% Similarity=0.185 Sum_probs=35.0
Q ss_pred CccCCHHHHHhhh----c-cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEE
Q 014631 167 GWEVDLDGLEALA----D-ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVI 219 (421)
Q Consensus 167 ~~~~d~e~l~~~~----~-~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li 219 (421)
+..+|.+.+++.+ + .+...++ ...++.-+..++.++.+++.+.+.+. ++.+|
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~-~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi 77 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLY-VGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI 77 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEE-ESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEE-eCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE
Confidence 4568988887755 3 4455554 44555556778999999998888753 35555
No 478
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.55 E-value=2e+02 Score=25.46 Aligned_cols=53 Identities=13% Similarity=0.127 Sum_probs=36.2
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++++.+.+. .+.||.
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl-~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 108 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSV-GILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA 108 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEE-EESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEE-EECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE
Confidence 45689888877653 355665 444555566778989999998888753 355554
No 479
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=23.49 E-value=3.7e+02 Score=23.46 Aligned_cols=27 Identities=15% Similarity=0.357 Sum_probs=17.7
Q ss_pred CHHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 117 GCKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 117 g~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
++.+++.++-.+- +-| |.|++..|.|.
T Consensus 102 st~~ai~la~~A~-~~Gadavlv~~P~y~ 129 (315)
T 3si9_A 102 STSEAVELAKHAE-KAGADAVLVVTPYYN 129 (315)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEECCCSS
T ss_pred CHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 3566666554443 344 89999999885
No 480
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.47 E-value=60 Score=30.04 Aligned_cols=28 Identities=21% Similarity=0.200 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 81 ~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 81 KEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 4999999999999999999999986543
No 481
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=23.46 E-value=67 Score=29.59 Aligned_cols=28 Identities=36% Similarity=0.541 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhcCcEEEEcccccccc
Q 014631 201 YQQLQKIAEKARKLGIMVISDEVYDHLT 228 (421)
Q Consensus 201 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 228 (421)
.++++++++.|+++|+-||.|-++-...
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 101 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTT 101 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 4999999999999999999999886644
No 482
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=23.41 E-value=2.6e+02 Score=24.00 Aligned_cols=50 Identities=8% Similarity=0.075 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhhhCCCCCCCCcEEEcCC---HHHHHHHHHHHhcCCC-CeEEEcCCCCcc
Q 014631 89 LPARRAIADYLNSELPCKLSPDDVYLTAG---CKQAIQVILTVLARPG-ANILLPKPGFPL 145 (421)
Q Consensus 89 ~~l~~~ia~~l~~~~~~~~~~~~i~~~~g---~~~al~~~~~~l~~~g-d~Vl~~~p~y~~ 145 (421)
.+=|..+.+...+. +.. |+...| +.+++.++-.+ .+.| |.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~----~~g--ViaGvg~~~t~~ai~la~~A-~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV----THK--LIFQVGSLNLNDVMELVKFS-NEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTT----CSC--EEEECCCSCHHHHHHHHHHH-HTSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHH----hCC--eEEeeCCCCHHHHHHHHHHH-HhcCCCEEEEcCCcCCC
Confidence 45566666666431 122 666544 45666554443 3455 899999998864
No 483
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=23.40 E-value=54 Score=28.38 Aligned_cols=23 Identities=9% Similarity=0.245 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHHhcCcEEEEcc
Q 014631 200 TYQQLQKIAEKARKLGIMVISDE 222 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De 222 (421)
..+.++++++.|+++|+++|+|-
T Consensus 62 ~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 62 DIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 35889999999999999999984
No 484
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=23.37 E-value=55 Score=30.46 Aligned_cols=28 Identities=32% Similarity=0.654 Sum_probs=24.4
Q ss_pred CHHHHHHHHHHHHhcCcEEEEccccccc
Q 014631 200 TYQQLQKIAEKARKLGIMVISDEVYDHL 227 (421)
Q Consensus 200 ~~~~l~~i~~~~~~~~~~li~De~~~~~ 227 (421)
+.++++++++.|+++|+.||.|-+.-..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 3499999999999999999999887543
No 485
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=23.26 E-value=1.7e+02 Score=25.29 Aligned_cols=47 Identities=17% Similarity=0.200 Sum_probs=32.2
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+.
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl-~v~GtTGE~~~Ls~eEr~~v~~~~~~~ 64 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAI-FVNGTTGLGPALSKDEKRQNLNALYDV 64 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEE-EETSTTTTGGGSCHHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEE-EECccccChhhCCHHHHHHHHHHHHHH
Confidence 45688888877553 355555 444555566778888888888888754
No 486
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=23.03 E-value=2e+02 Score=20.63 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=29.2
Q ss_pred eeEEeCCCCCCCCeEEEEec-CCHHHHHHHHHHHHHHHHHhh
Q 014631 378 VIVLPGMAVGMKNWLRITFA-IEPSALEEGLGRIKAFCQRHA 418 (421)
Q Consensus 378 v~v~~g~~~~~~~~iRi~~~-~~~e~l~~~~~~l~~~~~~~~ 418 (421)
+.++|.. -...+|+.+- .+.+++++.++.+.+.+++..
T Consensus 59 vlvRpSG---TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~ 97 (112)
T 1wjw_A 59 AFVRPSG---TEDIVRVYAEANSQESADRLAYEVSLLVFQLA 97 (112)
T ss_dssp EEEECSS---SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHT
T ss_pred EEEEeCC---CccEEEEEEEECCHHHHHHHHHHHHHHHHHHH
Confidence 5566643 2678999886 788899999999998887754
No 487
>4f6o_A Metacaspase-1; rossmann fold, hydrolase; HET: DFH; 1.68A {Saccharomyces cerevisiae}
Probab=22.78 E-value=1.3e+02 Score=26.91 Aligned_cols=57 Identities=21% Similarity=0.350 Sum_probs=35.2
Q ss_pred CCCCHHHHHHHHHHHhhhCCCCCCCCcE-EEcC--------CHHHHHHHHHHHhc---CCCCeEEEcCCCC
Q 014631 85 SVGILPARRAIADYLNSELPCKLSPDDV-YLTA--------GCKQAIQVILTVLA---RPGANILLPKPGF 143 (421)
Q Consensus 85 ~~g~~~l~~~ia~~l~~~~~~~~~~~~i-~~~~--------g~~~al~~~~~~l~---~~gd~Vl~~~p~y 143 (421)
..|...=-+.++++|...+|+ .+++| +++. -+.+.+...+.-|. ++||.+++-=-+|
T Consensus 70 L~g~vnDA~~m~~~L~~~~Gf--~~~~I~lLtd~~~~~~~~pTr~nI~~aL~~L~~~a~pgD~llfYFSGH 138 (350)
T 4f6o_A 70 LRGCINDAHNIFNFLTNGYGY--SSDDIVILTDDQNDLVRVPTRANMIRAMQWLVKDAQPNDSLFLHYSGH 138 (350)
T ss_dssp CSSHHHHHHHHHHHHHHHSCC--CGGGEEEEETTSSCGGGSCCHHHHHHHHHHHHTTCCTTCEEEEEEESC
T ss_pred CCCHHHHHHHHHHHHHHhcCC--CccceeeecccccccccCCCHHHHHHHHHHHHHhCCCCCEEEEEEcCC
Confidence 344445556788888776664 45565 4454 35666666666663 5889988844444
No 488
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=22.72 E-value=1.5e+02 Score=25.53 Aligned_cols=75 Identities=13% Similarity=0.081 Sum_probs=39.9
Q ss_pred CCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhh---hccCceEEEEeCCCCCcccccCHHHHHHHH
Q 014631 132 PGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEAL---ADENTVAMVIVNPGNPCGNVFTYQQLQKIA 208 (421)
Q Consensus 132 ~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~---~~~~~~~i~~~~p~nptG~~~~~~~l~~i~ 208 (421)
++..+++..+.| ..+++.+|++...+.-. ..+-.+.+.+|.++ ++++...+++.+++.+.. -.+
T Consensus 178 ~~~~~v~~H~af---~Yf~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~~------~~~--- 244 (286)
T 3gi1_A 178 RSKTFVTQHTAF---SYLAKRFGLKQLGISGI-SPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNPK------IAH--- 244 (286)
T ss_dssp SCCEEEEEESCC---HHHHHHTTCEEEEEECS-CC---CCHHHHHHHHHHHHHTTCCEEEECTTSCTH------HHH---
T ss_pred CCCEEEEECCch---HHHHHHCCCeEeecccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCChH------HHH---
Confidence 567888876654 46778899987765421 12223555555443 333333344555654332 222
Q ss_pred HHHHhcCcEEE
Q 014631 209 EKARKLGIMVI 219 (421)
Q Consensus 209 ~~~~~~~~~li 219 (421)
.++++.|+.++
T Consensus 245 ~la~~~g~~v~ 255 (286)
T 3gi1_A 245 AIAKSTGAKVK 255 (286)
T ss_dssp HHHHTTTCEEE
T ss_pred HHHHHhCCeEE
Confidence 24567777665
No 489
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=22.63 E-value=3.2e+02 Score=22.47 Aligned_cols=30 Identities=20% Similarity=0.248 Sum_probs=17.5
Q ss_pred cEEEcCCHHHHHHHHHHHhcCCCCeEEEcC
Q 014631 111 DVYLTAGCKQAIQVILTVLARPGANILLPK 140 (421)
Q Consensus 111 ~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~ 140 (421)
.+++|.++...=..+.+.|.+.|.+|++..
T Consensus 16 ~vlITGasggiG~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 16 TIIVTGGNRGIGLAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEECCCchHHHHHHHHHHHCCCeEEEEe
Confidence 466665544433445556667787776654
No 490
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=22.60 E-value=3.2e+02 Score=22.46 Aligned_cols=95 Identities=8% Similarity=-0.055 Sum_probs=43.7
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCC-CCcchHH---HHhhcCceeEeeeccCCCCccCCHHHHHhhhcc----
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKP-GFPLYEA---NARHTRLEIRHFDLLPEKGWEVDLDGLEALADE---- 181 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p-~y~~~~~---~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~---- 181 (421)
..+++|.++..-=..+.+.|.+.|.+|++..- .-..... .....+.++..+..+-. |.+.+++.+..
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 82 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVT-----VESDVINLVQSAIKE 82 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTT-----SHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 34666655444334455566667877776543 2111111 12223556666655432 45555544431
Q ss_pred --CceEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 182 --NTVAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 182 --~~~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
+..+++.+......+ ...+.+++++..+
T Consensus 83 ~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~ 114 (261)
T 1gee_A 83 FGKLDVMINNAGLENPVSSHEMSLSDWNKVID 114 (261)
T ss_dssp HSCCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 345554443322222 1245555554443
No 491
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=22.51 E-value=2.8e+02 Score=24.87 Aligned_cols=54 Identities=15% Similarity=0.267 Sum_probs=36.7
Q ss_pred CCccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 166 KGWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 166 ~~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
.+..+|.+.+++.++ .+...++ ...++.-+..++.++.+++++.+.+. .+.+|.
T Consensus 73 ~dg~ID~~al~~lv~~li~~Gv~Gl~-v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia 133 (360)
T 4dpp_A 73 PDGRFDLEAYDDLVNIQIQNGAEGVI-VGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG 133 (360)
T ss_dssp TTSSBCHHHHHHHHHHHHHTTCCEEE-ESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred CCCCcCHHHHHHHHHHHHHcCCCEEE-ecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 345689998887653 4566664 44455566788899999888877753 355554
No 492
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.40 E-value=3.8e+02 Score=23.22 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=20.1
Q ss_pred cEEEcCC---HHHHHHHHHHHhcCCC-CeEEEcCCCCc
Q 014631 111 DVYLTAG---CKQAIQVILTVLARPG-ANILLPKPGFP 144 (421)
Q Consensus 111 ~i~~~~g---~~~al~~~~~~l~~~g-d~Vl~~~p~y~ 144 (421)
.|+...| +.+++.++-.+- +.| |.|++..|.|.
T Consensus 83 pViaGvg~~st~~ai~la~~A~-~~Gadavlv~~P~y~ 119 (306)
T 1o5k_A 83 PVIVGAGTNSTEKTLKLVKQAE-KLGANGVLVVTPYYN 119 (306)
T ss_dssp CEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSS
T ss_pred eEEEcCCCccHHHHHHHHHHHH-hcCCCEEEECCCCCC
Confidence 3555433 466666554432 334 89999999885
No 493
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=22.36 E-value=1.8e+02 Score=25.09 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=36.2
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl-~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia 75 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSI-VAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIA 75 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEE-EESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEE-EECccccccccCCHHHHHHHHHHHHHHhCCCCeEEE
Confidence 45689888887653 355666 445555566788889999998888753 345553
No 494
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=22.27 E-value=1.3e+02 Score=22.31 Aligned_cols=38 Identities=11% Similarity=0.353 Sum_probs=28.3
Q ss_pred HHHHhhcCeeEEeCCCCCCCCeEEEEec--CCHHHHHHHHHH
Q 014631 370 LQLAKEESVIVLPGMAVGMKNWLRITFA--IEPSALEEGLGR 409 (421)
Q Consensus 370 ~~ll~~~gv~v~~g~~~~~~~~iRi~~~--~~~e~l~~~~~~ 409 (421)
..|.++.| +.||..+....|+-|.+. .++++|.++++.
T Consensus 72 ~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 72 GSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 34444556 669888888999999986 677888877764
No 495
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=22.25 E-value=1.7e+02 Score=25.29 Aligned_cols=47 Identities=15% Similarity=0.079 Sum_probs=34.0
Q ss_pred CccCCHHHHHhhhc----cCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc
Q 014631 167 GWEVDLDGLEALAD----ENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL 214 (421)
Q Consensus 167 ~~~~d~e~l~~~~~----~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~ 214 (421)
+..+|.+.+++.++ .+...+ +...++.-+..++.++.+++.+.+.+.
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl-~~~GttGE~~~Ls~~Er~~v~~~~~~~ 66 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAI-VSVGTTGESATLNHDEHADVVMMTLDL 66 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEE-EESSTTTTGGGSCHHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEE-EECccccchhhCCHHHHHHHHHHHHHH
Confidence 45799999887654 355665 445555566789999999999988753
No 496
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=22.24 E-value=1.2e+02 Score=26.70 Aligned_cols=57 Identities=11% Similarity=0.067 Sum_probs=0.0
Q ss_pred eccCCCCccCCHHHHHhhh----ccCceEEEEeCCCCCcccccCHHHHHHHHHHHHhc---CcEEEE
Q 014631 161 DLLPEKGWEVDLDGLEALA----DENTVAMVIVNPGNPCGNVFTYQQLQKIAEKARKL---GIMVIS 220 (421)
Q Consensus 161 ~~~~~~~~~~d~e~l~~~~----~~~~~~i~~~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~ 220 (421)
|.+.+.. +|.+.+++.+ ..+...+ +...++.-+..++.++.+++.+.+.+. ++.+|.
T Consensus 19 Pf~~dg~--iD~~~l~~lv~~li~~Gv~gl-~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia 82 (309)
T 3fkr_A 19 TFADTGD--LDLASQKRAVDFMIDAGSDGL-CILANFSEQFAITDDERDVLTRTILEHVAGRVPVIV 82 (309)
T ss_dssp CBCTTSS--BCHHHHHHHHHHHHHTTCSCE-EESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE
T ss_pred CCCcCCC--cCHHHHHHHHHHHHHcCCCEE-EECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE
No 497
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=22.22 E-value=2.7e+02 Score=23.99 Aligned_cols=34 Identities=21% Similarity=0.262 Sum_probs=20.3
Q ss_pred cEEEcC---CHHHHHHHHHHHhcCCC-CeEEEcCCCCcc
Q 014631 111 DVYLTA---GCKQAIQVILTVLARPG-ANILLPKPGFPL 145 (421)
Q Consensus 111 ~i~~~~---g~~~al~~~~~~l~~~g-d~Vl~~~p~y~~ 145 (421)
.|+... ++.+++.++-.+- +-| |.|++..|.|..
T Consensus 73 pviaGvg~~~t~~ai~la~~a~-~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 73 PVIAGTGTNDTEKSIQASIQAK-ALGADAIMLITPYYNK 110 (292)
T ss_dssp CEEEECCCSCHHHHHHHHHHHH-HHTCSEEEEECCCSSC
T ss_pred cEEEeCCcccHHHHHHHHHHHH-HcCCCEEEECCCCCCC
Confidence 355443 3566666554333 335 899998888763
No 498
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=22.09 E-value=87 Score=29.06 Aligned_cols=94 Identities=11% Similarity=0.096 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhcCCCCeEEEcCCCCc----chHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhccCceEEEEeCCCC
Q 014631 118 CKQAIQVILTVLARPGANILLPKPGFP----LYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADENTVAMVIVNPGN 193 (421)
Q Consensus 118 ~~~al~~~~~~l~~~gd~Vl~~~p~y~----~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~~~~~i~~~~p~n 193 (421)
..+++......+ ++-+-+.+++|... +|.......| ++ ++.-++-+.-+++.+++.+..+..-++..-++.
T Consensus 281 ~~elid~y~~ll-e~ypI~~IEDPl~~dD~eg~a~Lt~~lg-~i---~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKvnq 355 (441)
T 3qtp_A 281 VDGLIAEYVDYG-KHYPIASIEDPFAEDDWAAWNKFTVEHG-NF---QIVGDDLLVTNPARVQMAMDKNACNSVLIKVNQ 355 (441)
T ss_dssp HHHHHHHHHHHH-HHSCEEEEESCSCTTCHHHHHHHHHHTT-TS---EEEESTTTTTCHHHHHHHHHHTCCSEEEECGGG
T ss_pred HHHHHHHHHHHh-hhcceeeecCCCChHHHHHHHHHHHhcC-Cc---eEEeccccccCHHHHHHHHHcCCCCEEEecccc
Confidence 456666554444 44458888888764 4455555555 22 211222223368888888876654455666665
Q ss_pred CcccccCHHHHHHHHHHHHhcCcEEEE
Q 014631 194 PCGNVFTYQQLQKIAEKARKLGIMVIS 220 (421)
Q Consensus 194 ptG~~~~~~~l~~i~~~~~~~~~~li~ 220 (421)
.|.+ .+..+++++|+++|..+++
T Consensus 356 -iGGI---TEalkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 356 -IGTL---TETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp -TCCH---HHHHHHHHHHHHTTCEEEE
T ss_pred -cccH---HHHHHHHHHHHHcCCeEEE
Confidence 4444 5788999999999988765
No 499
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.04 E-value=3.4e+02 Score=22.55 Aligned_cols=97 Identities=7% Similarity=-0.026 Sum_probs=49.2
Q ss_pred CCcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcc---h---HHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc-
Q 014631 109 PDDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPL---Y---EANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE- 181 (421)
Q Consensus 109 ~~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~---~---~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~- 181 (421)
...+++|.|+...=..+.+.|.+.|.+|++..-.-.. . .......|.++..+..+-. |.+++++.++.
T Consensus 11 ~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~ 85 (262)
T 3ksu_A 11 NKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLS-----NEEEVAKLFDFA 85 (262)
T ss_dssp TCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCC-----SHHHHHHHHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHH
Confidence 3456666665544455566777889888774321111 1 1122334667777766533 55555554431
Q ss_pred -----CceEEEEeCCCCCccc--ccCHHHHHHHHHH
Q 014631 182 -----NTVAMVIVNPGNPCGN--VFTYQQLQKIAEK 210 (421)
Q Consensus 182 -----~~~~i~~~~p~nptG~--~~~~~~l~~i~~~ 210 (421)
+..+++.+......+. ..+.+++++..++
T Consensus 86 ~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 121 (262)
T 3ksu_A 86 EKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTI 121 (262)
T ss_dssp HHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 3344433322222232 3566777766653
No 500
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=21.97 E-value=3.1e+02 Score=22.81 Aligned_cols=89 Identities=7% Similarity=-0.046 Sum_probs=43.4
Q ss_pred CcEEEcCCHHHHHHHHHHHhcCCCCeEEEcCCCCcchHHHHhhcCceeEeeeccCCCCccCCHHHHHhhhcc------Cc
Q 014631 110 DDVYLTAGCKQAIQVILTVLARPGANILLPKPGFPLYEANARHTRLEIRHFDLLPEKGWEVDLDGLEALADE------NT 183 (421)
Q Consensus 110 ~~i~~~~g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~e~l~~~~~~------~~ 183 (421)
..+++|.++...=..+.+.|.+.|.+|++..-.-.. ....++..+..+-. |.+.+++.+.. +.
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~i 97 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP------SADPDIHTVAGDIS-----KPETADRIVREGIERFGRI 97 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCC------CSSTTEEEEESCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhh------cccCceEEEEccCC-----CHHHHHHHHHHHHHHCCCC
Confidence 346666555444445556677788887775432211 11123444444322 55555554432 34
Q ss_pred eEEEEeCCCCCcc--cccCHHHHHHHHH
Q 014631 184 VAMVIVNPGNPCG--NVFTYQQLQKIAE 209 (421)
Q Consensus 184 ~~i~~~~p~nptG--~~~~~~~l~~i~~ 209 (421)
.+++.+......+ ...+.+++++..+
T Consensus 98 D~lv~nAg~~~~~~~~~~~~~~~~~~~~ 125 (260)
T 3un1_A 98 DSLVNNAGVFLAKPFVEMTQEDYDHNLG 125 (260)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 5454433332222 2346677766554
Done!