Query 014634
Match_columns 421
No_of_seqs 136 out of 1361
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 15:06:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3l1l_A Arginine/agmatine antip 99.9 1.9E-19 6.4E-24 176.6 29.9 347 27-385 5-380 (445)
2 3gia_A Uncharacterized protein 99.8 4E-17 1.4E-21 159.9 28.7 346 27-384 3-369 (444)
3 4djk_A Probable glutamate/gamm 99.7 5.1E-14 1.8E-18 140.3 31.5 241 25-275 6-262 (511)
4 2jln_A MHP1; hydantoin, transp 99.0 6E-07 2.1E-11 88.5 31.0 329 27-368 22-374 (501)
5 3dh4_A Sodium/glucose cotransp 98.2 0.0022 7.5E-08 63.5 30.4 153 28-193 18-173 (530)
6 2xq2_A Sodium/glucose cotransp 97.8 0.015 5.2E-07 58.3 27.1 151 29-192 48-201 (593)
7 2a65_A Leutaa, Na(+):neurotran 97.7 0.044 1.5E-06 53.5 32.1 249 27-276 4-309 (519)
8 4ain_A Glycine betaine transpo 89.7 10 0.00034 36.9 15.3 154 28-184 92-270 (539)
9 2wsw_A BCCT family betaine/car 50.5 1.8E+02 0.0061 28.0 21.2 26 28-53 87-112 (509)
10 3l1l_A Arginine/agmatine antip 29.4 3.4E+02 0.011 24.9 14.1 47 91-137 258-304 (445)
No 1
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=99.86 E-value=1.9e-19 Score=176.57 Aligned_cols=347 Identities=13% Similarity=0.151 Sum_probs=224.3
Q ss_pred CCCCCcchHHHHHHHHHhhhhhhhchhHHHHHhhcHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHhcCcc
Q 014634 27 SRTSKTSFFKTCFNGVNALSGVGILSTPYALASGGWLSLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGDRAFGRN 106 (421)
Q Consensus 27 ~~~~~~s~~~~~~~li~~~iG~GiL~LP~~~~~~G~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~~~~G~~ 106 (421)
+++|+.+.+++++..+++++|+|++.+|...++.|..+++.+++.++........+.|...+.|+..+..+..++.+||+
T Consensus 5 ~~~r~l~~~~~~~l~ig~~iG~Gif~~~~~~~~~G~~~~~~~li~~~~~~~~a~~~~el~~~~p~~Gg~y~~~~~~~G~~ 84 (445)
T 3l1l_A 5 ADAHKVGLIPVTLMVSGAIMGSGVFLLPANLASTGGIAIYGWLVTIIGALGLSMVYAKMSFLDPSPGGSYAYARRCFGPF 84 (445)
T ss_dssp --CCCBCHHHHHHHHHHHHCSSHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTTHHHHHHHHSCHH
T ss_pred CCCCcccHHHHHHHHHHhHHhhhHHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCCchhhHHhHcCCh
Confidence 46789999999999999999999999999888888668888888888888888999999888888889999999999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHHHHHHHHH
Q 014634 107 GRIIVSIFMNIELYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYVSASGVLA 186 (421)
Q Consensus 107 ~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~~~ 186 (421)
.+++..+..++........+....++.+..+++....+ .......+...+..-....++.+...+++.+....
T Consensus 85 ~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~~~ 157 (445)
T 3l1l_A 85 LGYQTNVLYWLACWIGNIAMVVIGVGYLSYFFPILKDP-------WVLTITCVVVLWIFVLLNIVGPKMITRVQAVATVL 157 (445)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCGGGGSH-------HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcccccc-------HHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHH
Confidence 99999999999887777888888888887766543211 01122222233333344457788888887776666
Q ss_pred HHHHHHhhhhccccc--ccccccc---ccccccCchhhhhhhhhhccccccchhhHHhhhhcc-ccchhHHHHHHHHHHH
Q 014634 187 SIITLGSIFSTGAFD--GVGFHRK---GTLVNWKGIPTSISLYAFCYCAHPVFPTLYTSMKKK-HQFSHVLLVCFFLCTF 260 (421)
Q Consensus 187 ~~~~~~~i~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p-~~~~~~~~~~~~~~~~ 260 (421)
.+..++.+....... .....+. ....++.++..++....|+|.|++......+|+||| |+.+|++..+..++.+
T Consensus 158 ~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~af~G~e~~~~~~~e~k~p~r~ip~a~~~~~~~~~~ 237 (445)
T 3l1l_A 158 ALIPIVGIAVFGWFWFRGETYMAAWNVSGLGTFGAIQSTLNVTLWSFIGVESASVAAGVVKNPKRNVPIATIGGVLIAAV 237 (445)
T ss_dssp HHHHHHHHHHTTSTTCCCCCCCCC-----------HHHHHHHHHHTTTTTTHHHHGGGGBSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhChhhcccccCccCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCccccccHHHHHHHHHHHH
Confidence 555544444333221 1111111 111235678899999999999999999999999999 6789999999999999
Q ss_pred HHHHHHhHHHHhhhcchh----hhhh---hhcCCCchhhHHHHHHHHHhhhhhhhcccchHHHHHHHh-----cc----c
Q 014634 261 IYASMAVFGYLMFGSEVQ----SQIT---LNLPTTKLSSRVAIYTTLVNPIAKYALMVTPVVNTIKMR-----FS----T 324 (421)
Q Consensus 261 ~y~~~~~~gy~~fg~~~~----~~il---~~~~~~~~~~~~~~~~~~i~~~~s~pl~~~~~~~~~~~~-----~~----~ 324 (421)
+|.+..+......+.+.. ++.. .... .++...+......+..+.+..-..+...+.+... ++ +
T Consensus 238 ~y~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~a~dg~lP~~~~~ 316 (445)
T 3l1l_A 238 CYVLSTTAIMGMIPNAALRVSASPFGDAARMAL-GDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAAADDGLFPPIFAR 316 (445)
T ss_dssp HHHHHHHHHHHHSCTTTSCSTTCTHHHHHHHHH-CTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHTTSSCGGGGC
T ss_pred HHHHHHHHHHhcCCHHHHhccCcHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHh
Confidence 999998877776654321 1111 1111 1222333334444455555444443333333221 11 1
Q ss_pred ccCC-CCceehhHHHHHHHHHHHHhh--cc----chHHHHHHhhhhhhhhhHhhhhhHHHHHHhcCcc
Q 014634 325 QYSK-RPYSLLISTGFVISTVIVALV--VP----FFGYLMALVGAFLSMTASVILPCLCYLKISGAYR 385 (421)
Q Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~ia~~--~~----~~~~v~~~~G~~~~~~~~~ilP~l~~l~~~~~~~ 385 (421)
.+++ .+.+.+.-... .+.++... .| .++.+.++.+ ....+.|.++.+.+++.+++++
T Consensus 317 ~~~~~~P~~a~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~y~~~~~~~~~~r~~~~ 380 (445)
T 3l1l_A 317 VNKAGTPVAGLIIVGI--LMTIFQLSSISPNATKEFGLVSSVSV--IFTLVPYLYTCAALLLLGHGHF 380 (445)
T ss_dssp CCTTCCCHHHHHHHHH--HHHHHHHSTTSHHHHCCCHHHHHHHH--HHHHHHHHHHHHHHHHHHSSSS
T ss_pred cCCCCCCHHHHHHHHH--HHHHHHHHHHcccHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhhcCc
Confidence 1111 11122222221 12222222 22 3666777654 3457899999999999987763
No 2
>3gia_A Uncharacterized protein MJ0609; membrane protein, transporter, cell membrane, membrane, transmembrane, transport protein; HET: D10 BCN; 2.32A {Methanocaldococcus jannaschii} PDB: 3gi9_C* 3gi8_C
Probab=99.80 E-value=4e-17 Score=159.87 Aligned_cols=346 Identities=10% Similarity=0.031 Sum_probs=214.0
Q ss_pred CCCCCcchHHHHHHHHHhhhhhhhchhHHH-HHhhcHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHhcCc
Q 014634 27 SRTSKTSFFKTCFNGVNALSGVGILSTPYA-LASGGWLSLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGDRAFGR 105 (421)
Q Consensus 27 ~~~~~~s~~~~~~~li~~~iG~GiL~LP~~-~~~~G~~g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~~~~G~ 105 (421)
+++|+.+.++.++..+++++|+|++.+|.. ...+|...++.+++.+++.......+.|...+.|+..+..+..++.+||
T Consensus 3 ~~~r~l~~~~~~~l~~g~~iG~gi~~~~~~~~~~~G~~~~~~~li~~~~~~~~~~~~~el~~~~P~~Gg~y~~~~~~~G~ 82 (444)
T 3gia_A 3 LKNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGD 82 (444)
T ss_dssp CCCCCBCHHHHHHHHHHHHHHHHTTTSHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTTHHHHHHHHHCS
T ss_pred ccCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCcHHHhHHHHhCc
Confidence 467899999999999999999999998854 4456765778888888888888899999988888889999999999999
Q ss_pred cc-hhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHHHHHHH
Q 014634 106 NG-RIIVSIFMNIELYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYVSASGV 184 (421)
Q Consensus 106 ~~-~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~ 184 (421)
+. .....+..++........+....++++..+++....+ + ......+...+..-....++.+...+++....
T Consensus 83 ~~~~g~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~---~----~~~~~~~~~~~~~~~in~~g~~~~~~~~~~~~ 155 (444)
T 3gia_A 83 NIITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINT---F----NIAITEIGIVAFFTALNFFGSKAVGRAEFFIV 155 (444)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH---H----HHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCch---H----HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 62 2334566676666677778888888888776543211 0 11122222333333444667777777777666
Q ss_pred HHHHHHHHhhhhccccc--cccccccccccccCchhhhhhhhhhccccccchhhHHhhhhccc-cchhHHHHHHHHHHHH
Q 014634 185 LASIITLGSIFSTGAFD--GVGFHRKGTLVNWKGIPTSISLYAFCYCAHPVFPTLYTSMKKKH-QFSHVLLVCFFLCTFI 261 (421)
Q Consensus 185 ~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p~-~~~~~~~~~~~~~~~~ 261 (421)
...+...+.++...... ..+..+...+.++.++..++....|+|.|++.+....+|+|||+ +.+|++..+..++.++
T Consensus 156 ~~~i~~~~~~ii~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~G~e~~~~~~~e~k~P~r~ip~ai~~~~~~~~~~ 235 (444)
T 3gia_A 156 LVKLLILGLFIFAGLITIHPSYVIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFV 235 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCCGGGTSCCCSHHHHHHHHHHHHHGGGGGTHHHHHHTTGGGBSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcChhhcCCCCCCcchHHHHHHHHHHHHHHHhHHHHHHHHHHccCcccchhHHHHHHHHHHHHH
Confidence 55554444333322211 11112212234455688888999999999999999999999994 5999999999999999
Q ss_pred HHHHHhHHHHhhhcchh----hhhh-hhcCC--CchhhHHHHHHHHHhhhhhhhcccchHHHHHH----H-hcc----cc
Q 014634 262 YASMAVFGYLMFGSEVQ----SQIT-LNLPT--TKLSSRVAIYTTLVNPIAKYALMVTPVVNTIK----M-RFS----TQ 325 (421)
Q Consensus 262 y~~~~~~gy~~fg~~~~----~~il-~~~~~--~~~~~~~~~~~~~i~~~~s~pl~~~~~~~~~~----~-~~~----~~ 325 (421)
|....+......+.+.- ++.+ ....+ +++...+......+..+.+..-..+...+.+. + .++ +.
T Consensus 236 y~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~~~~~sR~l~a~a~dg~lP~~f~~~ 315 (444)
T 3gia_A 236 YVGVAISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERK 315 (444)
T ss_dssp HHHHHHHHHTTSCHHHHHHTGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHSSCCSSCCTT
T ss_pred HHHHHHHHHhCCCHHHHhcccchhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHhCC
Confidence 99988776665543211 1111 00000 11111122222333333333333333222222 1 121 11
Q ss_pred cCCCCceehhHHHHHHHHHHHHhhccchHHHHHHhhhhhhhhhHhhhhhHHHHHHhcCc
Q 014634 326 YSKRPYSLLISTGFVISTVIVALVVPFFGYLMALVGAFLSMTASVILPCLCYLKISGAY 384 (421)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~ia~~~~~~~~v~~~~G~~~~~~~~~ilP~l~~l~~~~~~ 384 (421)
+++.+.+.+ ......+.+++.. .+++.+.++.+. +..+.|.++.+.+++.++++
T Consensus 316 ~~~~P~~a~--~~~~~~~~~~~~~-~~~~~l~~~~~~--~~~~~~~~~~~~~~~~r~~~ 369 (444)
T 3gia_A 316 VWFKSTEGL--YITSALGVLFALL-FNMEGVASITSA--VFMVIYLFVILSHYILIDEV 369 (444)
T ss_dssp SCCSCTHHH--HHHHHHHHHHHHH-SCHHHHHHHHHH--HHHHHHHHHHHHHHHTHHHH
T ss_pred CCCCCcHHH--HHHHHHHHHHHHH-cCHHHHHHHHHH--HHHHHHHHHHHHHHHhhhcC
Confidence 111112111 1112222222332 467888777543 45788999999999887765
No 3
>4djk_A Probable glutamate/gamma-aminobutyrate antiporter; LEUT, glutamate-GABA antiporter, transport protein; 3.10A {Escherichia coli} PDB: 4dji_A
Probab=99.68 E-value=5.1e-14 Score=140.28 Aligned_cols=241 Identities=11% Similarity=0.117 Sum_probs=152.3
Q ss_pred CCCCCCCcchHHHHHHHHHhhhhhhhchhHHHHHhhcHHHHHHHHHHHHHHH-HHHHHHHHhhc--cCCCCCCHHHHHHH
Q 014634 25 DDSRTSKTSFFKTCFNGVNALSGVGILSTPYALASGGWLSLLLLFLIAAATF-YSGLLIKRCMD--LDSNIKSYPDIGDR 101 (421)
Q Consensus 25 ~~~~~~~~s~~~~~~~li~~~iG~GiL~LP~~~~~~G~~g~i~~~~~~~~~~-~~~~~l~~~~~--~~~~~~s~~~l~~~ 101 (421)
+++.+|+.+.++.++..++.++| +..+|. .+..|...++..++.+.+.. .....+.|... +.| ..+....+++
T Consensus 6 ~~~~~r~l~~~~~~~l~~~~~ig--~~~~~~-~~~~G~~~~~~~~i~~~~~~l~~al~~ael~s~~~~P-~GG~y~~~~~ 81 (511)
T 4djk_A 6 QTGKAKQLTLLGFFAITASMVMA--VYEYPT-FATSGFSLVFFLLLGGILWFIPVGLCAAEMATVDGWE-EGGVFAWVSN 81 (511)
T ss_dssp ------CCCHHHHHHHTGGGGCC--GGGHHH-HHTTTTHHHHHHHHHHHHTHHHHHHHHHHHHTTSCC----CHHHHHHH
T ss_pred cCccCccccHHHHHHHHHHHHHh--hchhHH-HHhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCC-CCChhhhHHh
Confidence 34567899999999999999996 567775 45677555555555555443 36777888888 888 9999999999
Q ss_pred hcCccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhc--ccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHH
Q 014634 102 AFGRNGRIIVSIFMNIELYLVATGFLILEGDNLENLF--PNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYV 179 (421)
Q Consensus 102 ~~G~~~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~ 179 (421)
.+||+.+++..+..++.......++....++.+..++ +....+ .+ ......+..++..-....++.+...++
T Consensus 82 ~~g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~--~~----~~~~~~~~~~~~~~~in~~g~~~~~~~ 155 (511)
T 4djk_A 82 TLGPRWGFAAISFGYLQIAIGFIPMLYFVLGALSYILKWPALNED--PI----TKTIAALIILWALALTQFGGTKYTARI 155 (511)
T ss_dssp HHCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTTTTCGGGTSC--SS----HHHHHHHHHHHHHHHHHHTCSSSHHHH
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccC--cH----HHHHHHHHHHHHHHHHHHhChHHHHHH
Confidence 9999999999999888887776677767777665543 211111 00 112222233333334446778877777
Q ss_pred HHHHHHHH-HHHHHhhhhccc---ccccc----cccc--ccccccCchhhhhhhhhhccccccchhhHHhhhhcc-ccch
Q 014634 180 SASGVLAS-IITLGSIFSTGA---FDGVG----FHRK--GTLVNWKGIPTSISLYAFCYCAHPVFPTLYTSMKKK-HQFS 248 (421)
Q Consensus 180 s~~~~~~~-~~~~~~i~~~~~---~~~~~----~~~~--~~~~~~~~~~~~~~~~~faf~~~~~~~~i~~~m~~p-~~~~ 248 (421)
..+..... +..++.++..+. ..+.+ .+.. .+..+..+...++....|+|.|.+......+|+||| |+.+
T Consensus 156 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~G~e~~~~~a~E~k~P~k~ip 235 (511)
T 4djk_A 156 AKVGFFAGILLPAFILIALAAIYLHSGAPVAIEMDSKTFFPDFSKVGTLVVFVAFILSYMGVEASATHVNEMSNPGRDYP 235 (511)
T ss_dssp THHHHHHTTHHHHHHHHHHHHHHTC------------CCCCCTTSTTTTTTHHHHHHHHTTGGGGTGGGSSSSCCTTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCcccccCCCcccchHHHHHHHHHHHHhhHHHHHHHHHhccCcccchh
Confidence 76654331 111111111111 11110 0100 111111245567888999999999999999999999 5689
Q ss_pred hHHHHHHHHHHHHHHHHHhHHHHhhhc
Q 014634 249 HVLLVCFFLCTFIYASMAVFGYLMFGS 275 (421)
Q Consensus 249 ~~~~~~~~~~~~~y~~~~~~gy~~fg~ 275 (421)
|++..+..+++++|++..+......++
T Consensus 236 ~ai~~~~~~~~~~y~~~~~~~~~~~~~ 262 (511)
T 4djk_A 236 LAMLLLMVAAICLSSVGGLSIAMVIPG 262 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHeecCH
Confidence 999999999999999998877766654
No 4
>2jln_A MHP1; hydantoin, transporter, membrane protein, nucleobase-cation-symport-1 family; 2.85A {Microbacterium liquefaciens} PDB: 2jlo_A* 2x79_A
Probab=99.02 E-value=6e-07 Score=88.46 Aligned_cols=329 Identities=9% Similarity=-0.007 Sum_probs=179.3
Q ss_pred CCCCCcchHHHHHHHHHhhhhhhhchhHHHHHh-hcHH-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHhcC
Q 014634 27 SRTSKTSFFKTCFNGVNALSGVGILSTPYALAS-GGWL-SLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGDRAFG 104 (421)
Q Consensus 27 ~~~~~~s~~~~~~~li~~~iG~GiL~LP~~~~~-~G~~-g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~~~~G 104 (421)
+++|+.++++.+..-.+..++.+-+.+...+.. .++. +++.+++..++......+......+. + -++.++.+..||
T Consensus 22 ~~~R~~~~~~~~~~W~g~~~~i~~~~~Ga~~~~GLs~~~a~lai~lG~li~~~~~~l~~~~G~~~-G-l~~~v~~R~~FG 99 (501)
T 2jln_A 22 YAERSVGPFSLAAIWFAMAIQVAIFIAAGQMTSSFQVWQVIVAIAAGCTIAVILLFFTQSAAIRW-G-INFTVAARMPFG 99 (501)
T ss_dssp GGGCCBCHHHHHHHHHHHHCSTHHHHHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHTHHHHHH-C-CCHHHHTTTTSC
T ss_pred hhhCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHhHHHhhc-C-CChhhhhHhhcc
Confidence 345667888888888888888777777665554 2244 66666666665555555555544433 3 459999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHHHHHHH
Q 014634 105 RNGRIIVSIFMNIELYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYVSASGV 184 (421)
Q Consensus 105 ~~~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~ 184 (421)
+++..+..+...+..+|-........++.+...+.... +.. ......+++.++.++.. ..+++.+.++..+..
T Consensus 100 ~~Gs~i~~ll~~i~~igw~~v~~~~gg~al~~~~~~~~-g~~-----~~~v~~~i~~~l~~~~~-~~G~~~i~~~~~~~~ 172 (501)
T 2jln_A 100 IRGSLIPITLKALLSLFWFGFQTWLGALALDEITRLLT-GFT-----NLPLWIVIFGAIQVVTT-FYGITFIRWMNVFAS 172 (501)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCC-----CHHHHHHHHHHHHHHHH-TTHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-Ccc-----hHHHHHHHHHHHHHHHH-HhCHHHHHHHHHHHH
Confidence 99999999999888888877777777887777653221 100 11233444556666666 557777877777766
Q ss_pred HHHHHHHHhhhhcccc-ccc--c-ccccccccccCchhhhhhh-hhhccccccchhhHHhhhhcccc------------c
Q 014634 185 LASIITLGSIFSTGAF-DGV--G-FHRKGTLVNWKGIPTSISL-YAFCYCAHPVFPTLYTSMKKKHQ------------F 247 (421)
Q Consensus 185 ~~~~~~~~~i~~~~~~-~~~--~-~~~~~~~~~~~~~~~~~~~-~~faf~~~~~~~~i~~~m~~p~~------------~ 247 (421)
....+..+.+.+.... .+. + ............+..++.. ..+.-....+.++..+.+|++++ .
T Consensus 173 p~~~i~~i~~~~~~l~~~g~~~~~~~~~~~~~~~~~f~~ai~~~~~~~~~~~~~~~DysRy~~~~~~~~~~~~~~~~~~~ 252 (501)
T 2jln_A 173 PVLLAMGVYMVYLMLDGADVSLGEVMSMGGENPGMPFSTAIMIFVGGWIAVVVSIHDIVKECKVDPNASREGQTKADARY 252 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCHHHHTTCCCSSCCSCHHHHHHHHHTTTHHHHTTTHHHHTTBCCCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcchhhhccCCccchHHHHHHHHHHHHHHHHHHhccCcccccCCCCccccccchhhccchH
Confidence 5555444433332221 111 0 0111111223345555443 23333445778888889988876 3
Q ss_pred hhHHHHHHHHHHHHHHHHHhHHHHhhhcchhhhhhhh-cCCCchhhHHHH-HHHHHhhhhhhhc-ccchHHHHHHHhccc
Q 014634 248 SHVLLVCFFLCTFIYASMAVFGYLMFGSEVQSQITLN-LPTTKLSSRVAI-YTTLVNPIAKYAL-MVTPVVNTIKMRFST 324 (421)
Q Consensus 248 ~~~~~~~~~~~~~~y~~~~~~gy~~fg~~~~~~il~~-~~~~~~~~~~~~-~~~~i~~~~s~pl-~~~~~~~~~~~~~~~ 324 (421)
......+..+...+..++|...-...+...+..++.. ++.......+.. ..++++.+++--. ..++....+.+..++
T Consensus 253 ~~g~~lG~~i~~~~~~~lG~~~~~~~~~~dp~~~l~~~l~~~~~~~~~~~~~~~~la~i~tn~~~n~ys~~~~l~~~~~~ 332 (501)
T 2jln_A 253 ATAQWLGMVPASIIFGFIGAASMVLVGEWNPVIAITEVVGGVSIPMAILFQVFVLLATWSTNPAANLLSPAYTLCSTFPR 332 (501)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCSCHHHHHHHHHTCCCHHHHHHHHHHHHHHHHTTHHHHHTHHHHHHHHHHSTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHhCcc
Confidence 3333445555555555555543333333233333333 332222133333 4444454444432 667777777777533
Q ss_pred ccCCCCceehhHHHHHHHHHHHHhhc--cchHHHHHHhhhhhhhhh
Q 014634 325 QYSKRPYSLLISTGFVISTVIVALVV--PFFGYLMALVGAFLSMTA 368 (421)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~ia~~~--~~~~~v~~~~G~~~~~~~ 368 (421)
. .++.....+..++.+.++... ..+...+++.|.+..+..
T Consensus 333 ~----i~~~~~~~i~~vi~~~i~~~~~~~~f~~FL~~lg~~l~P~~ 374 (501)
T 2jln_A 333 V----FTFKTGVIVSAVVGLLMMPWQFAGVLNTFLNLLASALGPLA 374 (501)
T ss_dssp T----CCHHHHHHHHHHHHHHTCGGGTHHHHHHHHHHHHHTTHHHH
T ss_pred c----cchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 1 111112222233333333332 345666666666554433
No 5
>3dh4_A Sodium/glucose cotransporter; membrane protein, symporter, sugar transport, SGLT, ION TRAN membrane, sodium transport, symport; HET: GAL; 2.70A {Vibrio parahaemolyticus}
Probab=98.24 E-value=0.0022 Score=63.50 Aligned_cols=153 Identities=14% Similarity=0.116 Sum_probs=85.9
Q ss_pred CCCCcchHHHHHHHHHhhhhhh-hchhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHhcCc
Q 014634 28 RTSKTSFFKTCFNGVNALSGVG-ILSTPYALASGGWL-SLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGDRAFGR 105 (421)
Q Consensus 28 ~~~~~s~~~~~~~li~~~iG~G-iL~LP~~~~~~G~~-g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~~~~G~ 105 (421)
..|+.+++...+.+..+.+++. ++++|....+.|+. ....+. .+.........+....++. +..|..|+.++-||+
T Consensus 18 aGR~l~~~~~~~s~~at~~Sa~~~lG~~g~~y~~G~~~~~~~~~-~~~~~~i~~~~~~p~~~~~-~~~T~~e~l~~Rfg~ 95 (530)
T 3dh4_A 18 AGKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEK-GIYTIPEFVEKRFNK 95 (530)
T ss_dssp CCSCCCHHHHHHHHHHHHCSHHHHTHHHHHHHHTCGGGHHHHHH-HHHHHHHHHHHTHHHHHHT-TCCSHHHHHHHHTCH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHH-HHHHHHHHHHHHHHHHHHc-CCccHHHHHHHHcCc
Confidence 4688999999999999988877 77999887777754 211111 1111112222233333333 789999999999999
Q ss_pred cchhHHHHHHHHH-HHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHHHHHHH
Q 014634 106 NGRIIVSIFMNIE-LYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYVSASGV 184 (421)
Q Consensus 106 ~~~~~~~~~~~~~-~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~ 184 (421)
+.+.+..+...+. .+....+-+...+..++.++. .+ ....+++..++........+++...+...+-.
T Consensus 96 ~~~~~~a~~~l~~~~~~~~~~~l~~~~~~~~~~~G-i~----------~~~~i~i~~~i~~~Yt~~GGl~aV~~TD~iQ~ 164 (530)
T 3dh4_A 96 KLKTILAVFWISLYIFVNLTSVLYLGGLALETILG-IP----------LMYSILGLALFALVYSIYGGLSAVVWTDVIQV 164 (530)
T ss_dssp HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CC----------HHHHHHHHHHHHHHTTC------CCSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CC----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 9887776654332 222222223333444444432 11 12334455566667777888888887777776
Q ss_pred HHHHHHHHh
Q 014634 185 LASIITLGS 193 (421)
Q Consensus 185 ~~~~~~~~~ 193 (421)
+.++...+.
T Consensus 165 ~im~~g~~~ 173 (530)
T 3dh4_A 165 FFLVLGGFM 173 (530)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666554333
No 6
>2xq2_A Sodium/glucose cotransporter; transport protein, inverted repeats, LEUT-fold, galactose; 2.73A {Vibrio parahaemolyticus} PDB: 2xq2_B 2kpe_A
Probab=97.79 E-value=0.015 Score=58.30 Aligned_cols=151 Identities=15% Similarity=0.114 Sum_probs=82.0
Q ss_pred CCCcchHHHHHHHHHhhhhhh-hchhHHHHHhhcHH-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHHHhcCcc
Q 014634 29 TSKTSFFKTCFNGVNALSGVG-ILSTPYALASGGWL-SLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGDRAFGRN 106 (421)
Q Consensus 29 ~~~~s~~~~~~~li~~~iG~G-iL~LP~~~~~~G~~-g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~~~~G~~ 106 (421)
.|+.+++...+.+..+.+++. .++.|....+.|+. ....+. .+.........+..-.++. +..|..|+.++-||++
T Consensus 48 GR~l~~~~~~~Sl~at~~sa~t~lG~~g~~y~~G~~~~~~~~~-~~~~~~~~~~~~~p~~~r~-~~~T~~e~l~~Rfg~~ 125 (593)
T 2xq2_A 48 GKSLPWWAVGASLIAANISAEQFIGMSGSGYSIGLAIASYEWM-SAITLIIVGKYFLPIFIEK-GIYTIPEFVEKRFNKK 125 (593)
T ss_dssp ---CCHHHHHHHHHGGGSSHHHHHHHHHHHHHTCGGGGHHHHH-HHHHHHHHHHTHHHHHHHT-TCCSHHHHHHHHTCHH
T ss_pred CCCCCHHHHHHHHHHHHhcHHHHhhHhHHHHHcCHHHHHHHHH-HHHHHHHHHHHHHHHHHhC-CCCCcHHHHHHHccCc
Confidence 578899999999988887776 66899877777753 211111 1111111122233333333 7899999999999998
Q ss_pred chhHHHHHHHH-HHHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHHHHhhhcccCCChhHHHHHHHHH
Q 014634 107 GRIIVSIFMNI-ELYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALIILPTVWLDNLSLLSYVSASGVL 185 (421)
Q Consensus 107 ~~~~~~~~~~~-~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~pl~~~~~~~~l~~~s~~~~~ 185 (421)
.+.+..+...+ +.+.....-+...+..++.++.- + ....+++..++........+++...+...+-.+
T Consensus 126 ~~~~~ai~~l~~~~~~~~~~~l~~~~~~l~~~~Gi-~----------~~~~i~i~~~i~~~Yt~~GGl~av~~TD~iQ~i 194 (593)
T 2xq2_A 126 LKTILAVFWISLYIFVNLTSVLYLGGLALETILGI-P----------LMYSILGLALFALVYSIYGGLSAVVWTDVIQVF 194 (593)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCC-C----------HHHHHHHHHHHHHHHHHTTC---CCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCc-c----------HHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 87776554332 22222222233334444444321 1 113334455566667777888888777776666
Q ss_pred HHHHHHH
Q 014634 186 ASIITLG 192 (421)
Q Consensus 186 ~~~~~~~ 192 (421)
.++...+
T Consensus 195 iml~~~l 201 (593)
T 2xq2_A 195 FLVLGGF 201 (593)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554433
No 7
>2a65_A Leutaa, Na(+):neurotransmitter symporter (SNF family); membrane protein, transport protein; HET: BOG; 1.65A {Aquifex aeolicus} SCOP: f.54.1.1 PDB: 2q6h_A* 2q72_A* 2qb4_A* 2qei_A* 3f3a_A* 3f3c_A* 3f3d_A* 3f3e_A* 3f48_A* 3f4i_A* 3f4j_A* 3usg_A* 3usi_A 3usj_A 3usk_A 3usl_A* 3usm_A* 3uso_A 3usp_A* 3qs5_A* ...
Probab=97.70 E-value=0.044 Score=53.51 Aligned_cols=249 Identities=13% Similarity=0.061 Sum_probs=125.7
Q ss_pred CCCCCcchHHHHHHHHHhhhhhh-hchhHHHHHh-hcH---H-HHHHHHHHHHHHHHHHHHHHHhhccCCCCCCHHHHHH
Q 014634 27 SRTSKTSFFKTCFNGVNALSGVG-ILSTPYALAS-GGW---L-SLLLLFLIAAATFYSGLLIKRCMDLDSNIKSYPDIGD 100 (421)
Q Consensus 27 ~~~~~~s~~~~~~~li~~~iG~G-iL~LP~~~~~-~G~---~-g~i~~~~~~~~~~~~~~~l~~~~~~~~~~~s~~~l~~ 100 (421)
++++-.|..+-.+..+++.+|-| +.=.||...+ .|- + -++++++.++-..+.=..+.|-..++ .+.+-.+..+
T Consensus 4 ~R~~W~sr~~FiLa~~G~AVGLGNiWRFPyl~~~nGGgAFlipYli~l~~~GiPll~~E~alGq~~~~~-~r~~~i~a~~ 82 (519)
T 2a65_A 4 KREHWATRLGLILAMAGNAVGLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQ-GHGTTPAIFY 82 (519)
T ss_dssp -CCCCSCHHHHHHHHHHHHSSHHHHTHHHHHHHHTTTHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-TCCSHHHHHH
T ss_pred ccccCCcHHHHHHHHHHHHhcccHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHhcccchhc-cCCCHHHHHH
Confidence 34566778888999999999999 8899998776 442 2 44445555555555545555522212 2233344444
Q ss_pred HhcCccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhccccccccc----------------------------c-ccc-
Q 014634 101 RAFGRNGRIIVSIFMNIELYLVATGFLILEGDNLENLFPNFAIEVG----------------------------G-LTI- 150 (421)
Q Consensus 101 ~~~G~~~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~----------------------------~-~~~- 150 (421)
+...+.......+...+..+....-|.++.+-.+..+......+.+ + .+.
T Consensus 83 ~l~~~~~~~giG~~~v~~~~~i~~yY~vi~gW~l~Y~~~s~~~~lp~~w~~~~~~~~~~~~~~~~f~~~l~~~~~~~~~g 162 (519)
T 2a65_A 83 LLWRNRFAKILGVFGLWIPLVVAIYYVYIESWTLGFAIKFLVGLVPEPPPNATDPDSILRPFKEFLYSYIGVPKGDEPIL 162 (519)
T ss_dssp HHSCSHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCC--CCHHHHHHHHHHHHHHHHTCCSSSSCBC
T ss_pred HhcCCcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcccccCcHHHHHHHHHCCCCCccccc
Confidence 4433211122233333333333344444433333222111110000 0 000
Q ss_pred --ccchHHHHHHHHHHHhhhcccCC-ChhHHHHHHHHHHHHHHHHhhhhccccccc----ccccc--cccccc------C
Q 014634 151 --GAKQSFVVIIALIILPTVWLDNL-SLLSYVSASGVLASIITLGSIFSTGAFDGV----GFHRK--GTLVNW------K 215 (421)
Q Consensus 151 --~~~~~~~~~~~~i~~pl~~~~~~-~~l~~~s~~~~~~~~~~~~~i~~~~~~~~~----~~~~~--~~~~~~------~ 215 (421)
..+.....+...++.-++..|++ +...+++.+........++++.+++..-+. ..+.- .-..|| .
T Consensus 163 ~~~~~~~~~~~~~w~i~~~ii~~Gv~kgiek~~~~~mp~l~vlliiL~ir~ltLpGp~~~A~~Gl~~~~~Pd~s~L~~~~ 242 (519)
T 2a65_A 163 KPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPG 242 (519)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHTTCTTTTHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEHHHHHHHHHSCCTTSTTCHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHhcCCHHHhCCHH
Confidence 00111111223334445667898 778888888877777766666666554211 00000 001222 2
Q ss_pred chhhhhhhhhhccc-cccchhhHHhhhhccccchhHHHHHHHHHHHHHH-----HHHhHHHHhhhcc
Q 014634 216 GIPTSISLYAFCYC-AHPVFPTLYTSMKKKHQFSHVLLVCFFLCTFIYA-----SMAVFGYLMFGSE 276 (421)
Q Consensus 216 ~~~~~~~~~~faf~-~~~~~~~i~~~m~~p~~~~~~~~~~~~~~~~~y~-----~~~~~gy~~fg~~ 276 (421)
-...+.+.+.|+.. |...+......+|++++..+........-+..-+ +++..||.++|.+
T Consensus 243 vw~~A~gQ~FFSLslG~G~~ity~SY~~~~~n~~~~a~~v~~~n~~~sllaG~~IF~~lgf~a~g~~ 309 (519)
T 2a65_A 243 VWIAAVGQIFFTLSLGFGAIITYASYVRKDQDIVLSGLTAATLNEKAEVILGGSISIPAAVAFFGVA 309 (519)
T ss_dssp HHHHHHHHHHHHHTTTSSHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHhHHHHhHHhhhhcccCCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 35678899999995 5555666666777777777755544444333332 2333455555533
No 8
>4ain_A Glycine betaine transporter BETP; membrane protein, chemosensor and osmosensor, secondary TRAN sodium coupled transport; HET: FLC CM5; 3.10A {Corynebacterium glutamicum} PDB: 4doj_A* 2w8a_A 2wit_A 3p03_A
Probab=89.74 E-value=10 Score=36.86 Aligned_cols=154 Identities=12% Similarity=0.043 Sum_probs=67.7
Q ss_pred CCCCcchHHHHHHHHHhhhhhhhchh----HHHH-Hh--hc-----HH-HHHHHHHHHHHHHHHHHHHHHhh-----ccC
Q 014634 28 RTSKTSFFKTCFNGVNALSGVGILST----PYAL-AS--GG-----WL-SLLLLFLIAAATFYSGLLIKRCM-----DLD 89 (421)
Q Consensus 28 ~~~~~s~~~~~~~li~~~iG~GiL~L----P~~~-~~--~G-----~~-g~i~~~~~~~~~~~~~~~l~~~~-----~~~ 89 (421)
.|.+-|.++=+..+.++-+|+|++.- |..- .+ .| -- +.-...+=+.+..++.+.++... .++
T Consensus 92 ~kPefS~~sW~aMlF~AGmGiGl~FwgvaEPl~h~~~pP~~~~~eAa~~Am~~t~fHWG~~~WAiYav~glalaY~~yrk 171 (539)
T 4ain_A 92 EAPEFRTVSWISMMFAAGMGIGLMFYGTTEPLTFYRNGVPGHDEHNVGVAMSTTMFHWTLHPWAIYAIVGLAIAYSTFRV 171 (539)
T ss_dssp CCCSSCHHHHHHHHHTTSCCTHHHHHHHHHHHHHHHTCCTTSCSSCHHHHHHHHHHHHSHHHHHHHHHHHHHHHCCCCCT
T ss_pred CCCCCcchHHHHHHHHHhhcchheeehhhhhHHHhcCCCCCccHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHhcC
Confidence 34555566668899999999998732 3221 10 11 11 33333443444444444443321 111
Q ss_pred CCCCCH-----HHHHHH-hcCccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhhcccccccccccccccchHHHHHHHHH
Q 014634 90 SNIKSY-----PDIGDR-AFGRNGRIIVSIFMNIELYLVATGFLILEGDNLENLFPNFAIEVGGLTIGAKQSFVVIIALI 163 (421)
Q Consensus 90 ~~~~s~-----~~l~~~-~~G~~~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 163 (421)
....+. +=++++ ..|+. +.++|++-.+...+....-+-....++..-+..... .+... ...+..++....+
T Consensus 172 ~~pl~iss~l~PllG~r~~~G~~-G~~IDilav~atv~GvatSLGlg~~Qi~~Gl~~lfG-i~~~~-~~~qi~ii~vit~ 248 (539)
T 4ain_A 172 GRKQLLSSAFVPLIGEKGAEGWL-GKLIDILAIIATVFGTACSLGLGALQIGAGLSAANI-IEDPS-DWTIVGIVSVLTL 248 (539)
T ss_dssp CCCSCTTGGGHHHHHHHHTTSHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCCS-TTTTTHHHHHHHH
T ss_pred CCCCcHHHHhHhhcCCCccCCcc-hhhhHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCCCC-hHHHHHHHHHHHH
Confidence 122333 344455 55554 456776655554444333343434443332222211 11000 1122344444444
Q ss_pred HHhhhcccCC-ChhHHHHHHHH
Q 014634 164 ILPTVWLDNL-SLLSYVSASGV 184 (421)
Q Consensus 164 ~~pl~~~~~~-~~l~~~s~~~~ 184 (421)
++-++-..++ |.++++|.+.+
T Consensus 249 i~~~Sa~sGl~kGIk~LS~~N~ 270 (539)
T 4ain_A 249 AFIFSAISGVGKGIQYLSNANM 270 (539)
T ss_dssp HHHHHHHC---CCHHHHGGGHC
T ss_pred HHHHHHHHhHHHHHHHHHHHHH
Confidence 4444545555 55555555444
No 9
>2wsw_A BCCT family betaine/carnitine/choline transporter; transport protein, SD methionine, membrane protein; HET: CM5 1PE; 2.29A {Proteus mirabilis} PDB: 2wsx_A* 3hfx_A*
Probab=50.48 E-value=1.8e+02 Score=27.98 Aligned_cols=26 Identities=12% Similarity=-0.034 Sum_probs=19.8
Q ss_pred CCCCcchHHHHHHHHHhhhhhhhchh
Q 014634 28 RTSKTSFFKTCFNGVNALSGVGILST 53 (421)
Q Consensus 28 ~~~~~s~~~~~~~li~~~iG~GiL~L 53 (421)
.|.+-|.++=+..+.++-+|+|++.-
T Consensus 87 ~kPefs~~sW~aMlF~aGmGiGl~fw 112 (509)
T 2wsw_A 87 EKPEFSTASWIFMMFASCTSAAVLFW 112 (509)
T ss_dssp SCCSSCHHHHHHHHHHHTCCHHHHHH
T ss_pred CCCCCccchHHHHHHHHhhhhHHhhh
Confidence 44556666668899999999998754
No 10
>3l1l_A Arginine/agmatine antiporter; TCDB 2.A.3.2.5, ADIC, Arg-bound, amino-acid transport, cell inner membrane, cell membrane, membrane; HET: ARG BNG; 3.00A {Escherichia coli} PDB: 3h5m_A* 3h6b_A 3lrb_A 3lrc_A 3ob6_A* 3hqk_A 3ncy_A
Probab=29.39 E-value=3.4e+02 Score=24.95 Aligned_cols=47 Identities=19% Similarity=0.261 Sum_probs=37.1
Q ss_pred CCCCHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q 014634 91 NIKSYPDIGDRAFGRNGRIIVSIFMNIELYLVATGFLILEGDNLENL 137 (421)
Q Consensus 91 ~~~s~~~l~~~~~G~~~~~~~~~~~~~~~~g~~~~y~~~~~~~l~~~ 137 (421)
......++.++.+|+++..+..+...+..++...++....+..+..+
T Consensus 258 ~~~p~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~sR~~~~~ 304 (445)
T 3l1l_A 258 SASPFGDAARMALGDTAGAIVSFCAAAGCLGSLGGWTLLAGQTAKAA 304 (445)
T ss_dssp TTCTHHHHHHHHHCTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred cCcHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999988888888887777777776666554
Done!